locus-tag class description DYL72_00025 PF13005 zinc-finger binding domain of transposase IS66 DYL72_00025 PF13007 Transposase C of IS166 homeodomain DYL72_00025 PF13817 IS66 C-terminal element DYL72_00025 PF03050 Transposase IS66 family DYL72_00040 PF13737 Transposase DDE domain DYL72_00080 PF13817 IS66 C-terminal element DYL72_00080 PF03050 Transposase IS66 family DYL72_00080 PF13007 Transposase C of IS166 homeodomain DYL72_00080 PF13005 zinc-finger binding domain of transposase IS66 DYL72_00095 PF01171 PP-loop family DYL72_00115 PF08402 TOBE domain DYL72_00115 PF00005 ABC transporter DYL72_00120 PF00528 Binding-protein-dependent transport system inner membrane component DYL72_00125 PF00528 Binding-protein-dependent transport system inner membrane component DYL72_00130 PF13416 Bacterial extracellular solute-binding protein DYL72_00135 PF13416 Bacterial extracellular solute-binding protein DYL72_00140 PF02146 Sir2 family DYL72_00145 PF00909 Ammonium Transporter Family DYL72_00150 PF00005 ABC transporter DYL72_00150 PF12848 ABC transporter DYL72_00160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYL72_00160 PF05231 MASE1 DYL72_00160 PF07730 Histidine kinase DYL72_00165 PF07690 Major Facilitator Superfamily DYL72_00175 PF00528 Binding-protein-dependent transport system inner membrane component DYL72_00180 PF00005 ABC transporter DYL72_00180 PF08402 TOBE domain DYL72_00185 PF12804 MobA-like NTP transferase domain DYL72_00190 PF03205 Molybdopterin guanine dinucleotide synthesis protein B DYL72_00200 PF00480 ROK family DYL72_00215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYL72_00215 PF00672 HAMP domain DYL72_00215 PF12729 Four helix bundle sensory module for signal transduction DYL72_00220 PF00877 NlpC/P60 family DYL72_00240 PF01554 MatE DYL72_00245 PF14743 DNA ligase OB-like domain DYL72_00245 PF01068 ATP dependent DNA ligase domain DYL72_00250 PF01734 Patatin-like phospholipase DYL72_00265 PF02472 Biopolymer transport protein ExbD/TolR DYL72_00270 PF01618 MotA/TolQ/ExbB proton channel family DYL72_00275 PF01618 MotA/TolQ/ExbB proton channel family DYL72_00300 PF04389 Peptidase family M28 DYL72_00300 PF04151 Bacterial pre-peptidase C-terminal domain DYL72_00305 PF02798 Glutathione S-transferase, N-terminal domain DYL72_00305 PF14497 Glutathione S-transferase, C-terminal domain DYL72_00315 PF04209 homogentisate 1,2-dioxygenase DYL72_00320 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DYL72_00330 PF01235 Sodium:alanine symporter family DYL72_00335 PF01810 LysE type translocator DYL72_00340 PF02074 Carboxypeptidase Taq (M32) metallopeptidase DYL72_00345 PF07690 Major Facilitator Superfamily DYL72_00360 PF00271 Helicase conserved C-terminal domain DYL72_00360 PF04408 Helicase associated domain (HA2) DYL72_00360 PF11898 Domain of unknown function (DUF3418) DYL72_00360 PF00270 DEAD/DEAH box helicase DYL72_00360 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DYL72_00380 PF00990 Diguanylate cyclase, GGDEF domain DYL72_00380 PF17158 Membrane-associated sensor, integral membrane domain DYL72_00390 PF00012 Hsp70 protein DYL72_00395 PF00012 Hsp70 protein DYL72_00400 PF00465 Iron-containing alcohol dehydrogenase DYL72_00425 PF00356 Bacterial regulatory proteins, lacI family DYL72_00430 PF00232 Glycosyl hydrolase family 1 DYL72_00435 PF00270 DEAD/DEAH box helicase DYL72_00435 PF00271 Helicase conserved C-terminal domain DYL72_00440 PF00384 Molybdopterin oxidoreductase DYL72_00440 PF18364 Molybdopterin oxidoreductase N-terminal domain DYL72_00440 PF01568 Molydopterin dinucleotide binding domain DYL72_00445 PF03264 NapC/NirT cytochrome c family, N-terminal region DYL72_00450 PF00313 'Cold-shock' DNA-binding domain DYL72_00460 PF00072 Response regulator receiver domain DYL72_00460 PF02954 Bacterial regulatory protein, Fis family DYL72_00460 PF00158 Sigma-54 interaction domain DYL72_00465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYL72_00465 PF00497 Bacterial extracellular solute-binding proteins, family 3 DYL72_00465 PF00512 His Kinase A (phospho-acceptor) domain DYL72_00485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYL72_00485 PF00672 HAMP domain DYL72_00490 PF00842 Alanine racemase, C-terminal domain DYL72_00490 PF01168 Alanine racemase, N-terminal domain DYL72_00495 PF00892 EamA-like transporter family DYL72_00500 PF00990 Diguanylate cyclase, GGDEF domain DYL72_00500 PF05230 MASE2 domain DYL72_00510 PF13302 Acetyltransferase (GNAT) domain DYL72_00515 PF18024 Helix-turn-helix domain DYL72_00515 PF00158 Sigma-54 interaction domain DYL72_00520 PF05128 Domain of unknown function (DUF697) DYL72_00525 PF04317 YcjX-like family, DUF463 DYL72_00540 PF04715 Anthranilate synthase component I, N terminal region DYL72_00540 PF00425 chorismate binding enzyme DYL72_00545 PF00293 NUDIX domain DYL72_00550 PF01610 Transposase DYL72_00550 PF13542 Helix-turn-helix domain of transposase family ISL3 DYL72_00550 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DYL72_00555 PF03222 Tryptophan/tyrosine permease family DYL72_00560 PF03315 Serine dehydratase beta chain DYL72_00560 PF03313 Serine dehydratase alpha chain DYL72_00565 PF12561 ToxR activated gene A lipoprotein domain DYL72_00565 PF00041 Fibronectin type III domain DYL72_00570 PF04231 Endonuclease I DYL72_00575 PF01242 6-pyruvoyl tetrahydropterin synthase DYL72_00580 PF17200 Single Cache domain 2 DYL72_00580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYL72_00580 PF00672 HAMP domain DYL72_00585 PF01336 OB-fold nucleic acid binding domain DYL72_00585 PF00152 tRNA synthetases class II (D, K and N) DYL72_00595 PF01339 CheB methylesterase DYL72_00595 PF00072 Response regulator receiver domain DYL72_00600 PF03975 CheD chemotactic sensory transduction DYL72_00605 PF01739 CheR methyltransferase, SAM binding domain DYL72_00605 PF03705 CheR methyltransferase, all-alpha domain DYL72_00610 PF01584 CheW-like domain DYL72_00615 PF12729 Four helix bundle sensory module for signal transduction DYL72_00615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYL72_00615 PF00672 HAMP domain DYL72_00620 PF09078 CheY binding DYL72_00620 PF02895 Signal transducing histidine kinase, homodimeric domain DYL72_00620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYL72_00620 PF01627 Hpt domain DYL72_00620 PF01584 CheW-like domain DYL72_00630 PF00072 Response regulator receiver domain DYL72_00635 PF00672 HAMP domain DYL72_00635 PF12729 Four helix bundle sensory module for signal transduction DYL72_00635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYL72_00640 PF01966 HD domain DYL72_00640 PF00672 HAMP domain DYL72_00645 PF00155 Aminotransferase class I and II DYL72_00650 PF00571 CBS domain DYL72_00655 PF02811 PHP domain DYL72_00655 PF14579 Helix-hairpin-helix motif DYL72_00655 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DYL72_00655 PF07733 Bacterial DNA polymerase III alpha NTPase domain DYL72_00655 PF11490 DNA polymerase III polC-type N-terminus II DYL72_00655 PF14480 DNA polymerase III polC-type N-terminus I DYL72_00655 PF00929 Exonuclease DYL72_00660 PF02743 Cache domain DYL72_00660 PF00672 HAMP domain DYL72_00660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYL72_00665 PF02028 BCCT, betaine/carnitine/choline family transporter DYL72_00670 PF01047 MarR family DYL72_00685 PF00753 Metallo-beta-lactamase superfamily DYL72_00690 PF05951 Bacterial protein of unknown function (DUF882) DYL72_00695 PF01471 Putative peptidoglycan binding domain DYL72_00695 PF03734 L,D-transpeptidase catalytic domain DYL72_00720 PF00925 GTP cyclohydrolase II DYL72_00725 PF00480 ROK family DYL72_00730 PF07715 TonB-dependent Receptor Plug Domain DYL72_00730 PF00593 TonB dependent receptor DYL72_00735 PF01243 Pyridoxamine 5'-phosphate oxidase DYL72_00740 PF06228 Haem utilisation ChuX/HutX DYL72_00745 PF03544 Gram-negative bacterial TonB protein C-terminal DYL72_00750 PF01618 MotA/TolQ/ExbB proton channel family DYL72_00755 PF02472 Biopolymer transport protein ExbD/TolR DYL72_00765 PF01032 FecCD transport family DYL72_00770 PF00005 ABC transporter DYL72_00785 PF00672 HAMP domain DYL72_00785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYL72_00790 PF00251 Glycosyl hydrolases family 32 N-terminal domain DYL72_00790 PF08244 Glycosyl hydrolases family 32 C terminal DYL72_00795 PF00356 Bacterial regulatory proteins, lacI family DYL72_00800 PF02378 Phosphotransferase system, EIIC DYL72_00800 PF00367 phosphotransferase system, EIIB DYL72_00805 PF00294 pfkB family carbohydrate kinase DYL72_00810 PF12792 CSS motif domain associated with EAL DYL72_00810 PF00563 EAL domain DYL72_00815 PF07885 Ion channel DYL72_00820 PF13358 DDE superfamily endonuclease DYL72_00855 PF00486 Transcriptional regulatory protein, C terminal DYL72_00880 PF00069 Protein kinase domain DYL72_00880 PF08239 Bacterial SH3 domain DYL72_00905 PF16697 Inner membrane component of T3SS, cytoplasmic domain DYL72_00925 PF07478 D-ala D-ala ligase C-terminus DYL72_00930 PF00004 ATPase family associated with various cellular activities (AAA) DYL72_00930 PF17871 AAA lid domain DYL72_00930 PF10431 C-terminal, D2-small domain, of ClpB protein DYL72_00930 PF07724 AAA domain (Cdc48 subfamily) DYL72_00975 PF04717 Type VI secretion system, phage-baseplate injector DYL72_00975 PF16671 Actin cross-linking domain DYL72_01000 PF02899 Phage integrase, N-terminal SAM-like domain DYL72_01000 PF00589 Phage integrase family DYL72_01025 PF00072 Response regulator receiver domain DYL72_01025 PF00990 Diguanylate cyclase, GGDEF domain DYL72_01035 PF18494 Pullulanase Ins domain DYL72_01035 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DYL72_01035 PF17967 Pullulanase N2 domain DYL72_01035 PF03714 Bacterial pullanase-associated domain DYL72_01035 PF11852 Domain of unknown function (DUF3372) DYL72_01045 PF01584 CheW-like domain DYL72_01045 PF00072 Response regulator receiver domain DYL72_01055 PF12431 Transcriptional regulator DYL72_01055 PF00072 Response regulator receiver domain DYL72_01060 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DYL72_01060 PF00989 PAS fold DYL72_01060 PF17203 Single cache domain 3 DYL72_01060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYL72_01075 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DYL72_01095 PF04204 Homoserine O-succinyltransferase DYL72_01110 PF05971 RNA methyltransferase DYL72_01115 PF01863 Protein of unknown function DUF45 DYL72_01125 PF03466 LysR substrate binding domain DYL72_01125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_01150 PF01032 FecCD transport family DYL72_01155 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family DYL72_01165 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase DYL72_01170 PF02654 Cobalamin-5-phosphate synthase DYL72_01180 PF16671 Actin cross-linking domain DYL72_01180 PF12146 Serine aminopeptidase, S33 DYL72_01180 PF11647 Membrane Localization Domain DYL72_01180 PF11713 Peptidase C80 family DYL72_01180 PF07634 RtxA repeat DYL72_01185 PF02794 RTX toxin acyltransferase family DYL72_01195 PF00005 ABC transporter DYL72_01195 PF03412 Peptidase C39 family DYL72_01195 PF00664 ABC transporter transmembrane region DYL72_01205 PF03412 Peptidase C39 family DYL72_01205 PF00005 ABC transporter DYL72_01205 PF00664 ABC transporter transmembrane region DYL72_01210 PF00672 HAMP domain DYL72_01210 PF02743 Cache domain DYL72_01210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYL72_01215 PF13460 NAD(P)H-binding DYL72_01225 PF08411 Exonuclease C-terminal DYL72_01225 PF00929 Exonuclease DYL72_01230 PF03788 LrgA family DYL72_01235 PF04172 LrgB-like family DYL72_01240 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region DYL72_01240 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DYL72_01245 PF00990 Diguanylate cyclase, GGDEF domain DYL72_01245 PF00563 EAL domain DYL72_01245 PF13188 PAS domain DYL72_01245 PF03707 Bacterial signalling protein N terminal repeat DYL72_01250 PF02222 ATP-grasp domain DYL72_01255 PF13426 PAS domain DYL72_01255 PF08447 PAS fold DYL72_01255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYL72_01260 PF05724 Thiopurine S-methyltransferase (TPMT) DYL72_01275 PF03484 tRNA synthetase B5 domain DYL72_01275 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DYL72_01275 PF01588 Putative tRNA binding domain DYL72_01275 PF03147 Ferredoxin-fold anticodon binding domain DYL72_01275 PF03483 B3/4 domain DYL72_01280 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DYL72_01280 PF01409 tRNA synthetases class II core domain (F) DYL72_01315 PF01066 CDP-alcohol phosphatidyltransferase DYL72_01320 PF08459 UvrC Helix-hairpin-helix N-terminal DYL72_01320 PF01541 GIY-YIG catalytic domain DYL72_01320 PF02151 UvrB/uvrC motif DYL72_01325 PF00072 Response regulator receiver domain DYL72_01325 PF00196 Bacterial regulatory proteins, luxR family DYL72_01330 PF00136 DNA polymerase family B DYL72_01330 PF03104 DNA polymerase family B, exonuclease domain DYL72_01340 PF09285 Elongation factor P, C-terminal DYL72_01340 PF01132 Elongation factor P (EF-P) OB domain DYL72_01340 PF08207 Elongation factor P (EF-P) KOW-like domain DYL72_01345 PF04269 Protein of unknown function, DUF440 DYL72_01355 PF07702 UTRA domain DYL72_01355 PF00392 Bacterial regulatory proteins, gntR family DYL72_01360 PF01979 Amidohydrolase family DYL72_01365 PF00491 Arginase family DYL72_01370 PF17391 Urocanase N-terminal domain DYL72_01370 PF01175 Urocanase Rossmann-like domain DYL72_01370 PF17392 Urocanase C-terminal domain DYL72_01375 PF00221 Aromatic amino acid lyase DYL72_01385 PF04191 Phospholipid methyltransferase DYL72_01390 PF02913 FAD linked oxidases, C-terminal domain DYL72_01390 PF01565 FAD binding domain DYL72_01390 PF13183 4Fe-4S dicluster domain DYL72_01420 PF12241 Trans-2-enoyl-CoA reductase catalytic region DYL72_01420 PF07055 Enoyl reductase FAD binding domain DYL72_01420 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase DYL72_01425 PF09317 Domain of unknown function (DUF1974) DYL72_01425 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DYL72_01425 PF02770 Acyl-CoA dehydrogenase, middle domain DYL72_01425 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DYL72_01430 PF16295 Tetracyclin repressor-like, C-terminal domain DYL72_01430 PF00440 Bacterial regulatory proteins, tetR family DYL72_01445 PF00171 Aldehyde dehydrogenase family DYL72_01450 PF00563 EAL domain DYL72_01450 PF03707 Bacterial signalling protein N terminal repeat DYL72_01450 PF00990 Diguanylate cyclase, GGDEF domain DYL72_01465 PF06610 L-alanine exporter DYL72_01470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYL72_01470 PF00512 His Kinase A (phospho-acceptor) domain DYL72_01470 PF09308 LuxQ, periplasmic DYL72_01470 PF00072 Response regulator receiver domain DYL72_01480 PF02445 Quinolinate synthetase A protein DYL72_01485 PF13525 Outer membrane lipoprotein DYL72_01485 PF16331 TolA binding protein trimerisation DYL72_01490 PF00691 OmpA family DYL72_01505 PF02472 Biopolymer transport protein ExbD/TolR DYL72_01510 PF01618 MotA/TolQ/ExbB proton channel family DYL72_01515 PF03061 Thioesterase superfamily DYL72_01520 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) DYL72_01525 PF08173 Membrane bound YbgT-like protein DYL72_01530 PF02322 Cytochrome bd terminal oxidase subunit II DYL72_01535 PF01654 Cytochrome bd terminal oxidase subunit I DYL72_01540 PF05496 Holliday junction DNA helicase RuvB P-loop domain DYL72_01540 PF17864 RuvB AAA lid domain DYL72_01540 PF05491 RuvB C-terminal winged helix domain DYL72_01545 PF01330 RuvA N terminal domain DYL72_01545 PF07499 RuvA, C-terminal domain DYL72_01550 PF02075 Crossover junction endodeoxyribonuclease RuvC DYL72_01555 PF01406 tRNA synthetases class I (C) catalytic domain DYL72_01555 PF09190 DALR domain DYL72_01560 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DYL72_01565 PF00149 Calcineurin-like phosphoesterase DYL72_01570 PF00563 EAL domain DYL72_01570 PF08668 HDOD domain DYL72_01575 PF02810 SEC-C motif DYL72_01580 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) DYL72_01590 PF06733 DEAD_2 DYL72_01590 PF13307 Helicase C-terminal domain DYL72_01595 PF01925 Sulfite exporter TauE/SafE DYL72_01600 PF07445 Primosomal replication protein priC DYL72_01605 PF10689 Protein of unknown function (DUF2496) DYL72_01610 PF00672 HAMP domain DYL72_01610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYL72_01640 PF13005 zinc-finger binding domain of transposase IS66 DYL72_01640 PF03050 Transposase IS66 family DYL72_01640 PF13007 Transposase C of IS166 homeodomain DYL72_01640 PF13817 IS66 C-terminal element DYL72_01655 PF00145 C-5 cytosine-specific DNA methylase DYL72_01660 PF03372 Endonuclease/Exonuclease/phosphatase family DYL72_01665 PF00528 Binding-protein-dependent transport system inner membrane component DYL72_01670 PF00528 Binding-protein-dependent transport system inner membrane component DYL72_01675 PF00497 Bacterial extracellular solute-binding proteins, family 3 DYL72_01680 PF00005 ABC transporter DYL72_01695 PF01228 Glycine radical DYL72_01695 PF02901 Pyruvate formate lyase-like DYL72_01705 PF00672 HAMP domain DYL72_01705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYL72_01710 PF04055 Radical SAM superfamily DYL72_01725 PF08298 PrkA AAA domain DYL72_01725 PF06798 PrkA serine protein kinase C-terminal domain DYL72_01730 PF04285 Protein of unknown function (DUF444) DYL72_01735 PF04293 SpoVR like protein DYL72_01740 PF02348 Cytidylyltransferase DYL72_01745 PF03966 Trm112p-like protein DYL72_01750 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DYL72_01755 PF00005 ABC transporter DYL72_01755 PF00664 ABC transporter transmembrane region DYL72_01760 PF13567 Domain of unknown function (DUF4131) DYL72_01760 PF00753 Metallo-beta-lactamase superfamily DYL72_01760 PF03772 Competence protein DYL72_01770 PF12704 MacB-like periplasmic core domain DYL72_01770 PF02687 FtsX-like permease family DYL72_01775 PF00005 ABC transporter DYL72_01780 PF12704 MacB-like periplasmic core domain DYL72_01780 PF02687 FtsX-like permease family DYL72_01790 PF02559 CarD-like/TRCF domain DYL72_01790 PF00270 DEAD/DEAH box helicase DYL72_01790 PF17757 UvrB interaction domain DYL72_01790 PF03461 TRCF domain DYL72_01790 PF00271 Helicase conserved C-terminal domain DYL72_01800 PF12563 Hemolytic toxin N terminal DYL72_01800 PF16458 Beta-prism lectin DYL72_01800 PF07968 Leukocidin/Hemolysin toxin family DYL72_01805 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYL72_01820 PF08139 Prokaryotic membrane lipoprotein lipid attachment site DYL72_01820 PF13036 Peptidoglycan-synthase activator LpoB DYL72_01835 PF01230 HIT domain DYL72_01840 PF00672 HAMP domain DYL72_01840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYL72_01850 PF00392 Bacterial regulatory proteins, gntR family DYL72_01850 PF07840 FadR C-terminal domain DYL72_01855 PF06450 Bacterial Na+/H+ antiporter B (NhaB) DYL72_01860 PF02600 Disulfide bond formation protein DsbB DYL72_01870 PF08241 Methyltransferase domain DYL72_01875 PF00155 Aminotransferase class I and II DYL72_01880 PF06968 Biotin and Thiamin Synthesis associated domain DYL72_01880 PF04055 Radical SAM superfamily DYL72_01885 PF00202 Aminotransferase class-III DYL72_01890 PF02403 Seryl-tRNA synthetase N-terminal domain DYL72_01890 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DYL72_01895 PF16193 AAA C-terminal domain DYL72_01895 PF12002 MgsA AAA+ ATPase C terminal DYL72_01895 PF00004 ATPase family associated with various cellular activities (AAA) DYL72_01900 PF03548 Outer membrane lipoprotein carrier protein LolA DYL72_01905 PF01043 SecA preprotein cross-linking domain DYL72_01905 PF07517 SecA DEAD-like domain DYL72_01905 PF07516 SecA Wing and Scaffold domain DYL72_01905 PF02810 SEC-C motif DYL72_01910 PF01207 Dihydrouridine synthase (Dus) DYL72_01915 PF00005 ABC transporter DYL72_01920 PF02653 Branched-chain amino acid transport system / permease component DYL72_01930 PF04217 Protein of unknown function, DUF412 DYL72_01935 PF00871 Acetokinase family DYL72_01940 PF01515 Phosphate acetyl/butaryl transferase DYL72_01940 PF07085 DRTGG domain DYL72_01945 PF13409 Glutathione S-transferase, N-terminal domain DYL72_01950 PF00005 ABC transporter DYL72_01950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DYL72_01955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DYL72_01955 PF00005 ABC transporter DYL72_01960 PF00528 Binding-protein-dependent transport system inner membrane component DYL72_01960 PF12911 N-terminal TM domain of oligopeptide transport permease C DYL72_01965 PF00528 Binding-protein-dependent transport system inner membrane component DYL72_01970 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DYL72_01975 PF00990 Diguanylate cyclase, GGDEF domain DYL72_01975 PF03707 Bacterial signalling protein N terminal repeat DYL72_01975 PF00563 EAL domain DYL72_01980 PF00512 His Kinase A (phospho-acceptor) domain DYL72_01980 PF09308 LuxQ, periplasmic DYL72_01980 PF00072 Response regulator receiver domain DYL72_01980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYL72_01985 PF04820 Tryptophan halogenase DYL72_02005 PF00550 Phosphopantetheine attachment site DYL72_02010 PF00550 Phosphopantetheine attachment site DYL72_02020 PF00501 AMP-binding enzyme DYL72_02020 PF13193 AMP-binding enzyme C-terminal domain DYL72_02030 PF00535 Glycosyl transferase family 2 DYL72_02035 PF00221 Aromatic amino acid lyase DYL72_02060 PF02801 Beta-ketoacyl synthase, C-terminal domain DYL72_02060 PF00109 Beta-ketoacyl synthase, N-terminal domain DYL72_02075 PF00109 Beta-ketoacyl synthase, N-terminal domain DYL72_02075 PF02801 Beta-ketoacyl synthase, C-terminal domain DYL72_02080 PF06629 MltA-interacting protein MipA DYL72_02085 PF01610 Transposase DYL72_02085 PF13542 Helix-turn-helix domain of transposase family ISL3 DYL72_02085 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DYL72_02120 PF01081 KDPG and KHG aldolase DYL72_02125 PF02447 GntP family permease DYL72_02130 PF01202 Shikimate kinase DYL72_02135 PF00920 Dehydratase family DYL72_02140 PF00356 Bacterial regulatory proteins, lacI family DYL72_02140 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DYL72_02155 PF00672 HAMP domain DYL72_02155 PF00512 His Kinase A (phospho-acceptor) domain DYL72_02155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYL72_02160 PF00486 Transcriptional regulatory protein, C terminal DYL72_02160 PF00072 Response regulator receiver domain DYL72_02165 PF06826 Predicted Permease Membrane Region DYL72_02165 PF02080 TrkA-C domain DYL72_02170 PF01810 LysE type translocator DYL72_02175 PF01037 Lrp/AsnC ligand binding domain DYL72_02195 PF13007 Transposase C of IS166 homeodomain DYL72_02195 PF13817 IS66 C-terminal element DYL72_02195 PF03050 Transposase IS66 family DYL72_02195 PF13005 zinc-finger binding domain of transposase IS66 DYL72_02205 PF00512 His Kinase A (phospho-acceptor) domain DYL72_02205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYL72_02205 PF08521 Two-component sensor kinase N-terminal DYL72_02210 PF00072 Response regulator receiver domain DYL72_02210 PF00486 Transcriptional regulatory protein, C terminal DYL72_02220 PF00106 short chain dehydrogenase DYL72_02230 PF00501 AMP-binding enzyme DYL72_02240 PF13358 DDE superfamily endonuclease DYL72_02280 PF13358 DDE superfamily endonuclease DYL72_02305 PF00990 Diguanylate cyclase, GGDEF domain DYL72_02315 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DYL72_02320 PF09619 Type III secretion system lipoprotein chaperone (YscW) DYL72_02330 PF01037 Lrp/AsnC ligand binding domain DYL72_02330 PF13404 AsnC-type helix-turn-helix domain DYL72_02335 PF00291 Pyridoxal-phosphate dependent enzyme DYL72_02350 PF07690 Major Facilitator Superfamily DYL72_02365 PF00501 AMP-binding enzyme DYL72_02370 PF13378 Enolase C-terminal domain-like DYL72_02375 PF00378 Enoyl-CoA hydratase/isomerase DYL72_02380 PF12697 Alpha/beta hydrolase family DYL72_02385 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DYL72_02385 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DYL72_02385 PF16582 Middle domain of thiamine pyrophosphate DYL72_02390 PF00425 chorismate binding enzyme DYL72_02400 PF00155 Aminotransferase class I and II DYL72_02410 PF13286 Phosphohydrolase-associated domain DYL72_02410 PF01966 HD domain DYL72_02425 PF01343 Peptidase family S49 DYL72_02425 PF08496 Peptidase family S49 N-terminal DYL72_02430 PF00106 short chain dehydrogenase DYL72_02435 PF00072 Response regulator receiver domain DYL72_02435 PF01584 CheW-like domain DYL72_02440 PF00480 ROK family DYL72_02445 PF02887 Pyruvate kinase, alpha/beta domain DYL72_02445 PF00224 Pyruvate kinase, barrel domain DYL72_02450 PF01734 Patatin-like phospholipase DYL72_02465 PF00209 Sodium:neurotransmitter symporter family DYL72_02475 PF02378 Phosphotransferase system, EIIC DYL72_02475 PF00367 phosphotransferase system, EIIB DYL72_02480 PF01026 TatD related DNase DYL72_02485 PF09115 DNA polymerase III, delta subunit, C terminal DYL72_02490 PF02223 Thymidylate kinase DYL72_02495 PF02618 YceG-like family DYL72_02500 PF01063 Amino-transferase class IV DYL72_02505 PF02801 Beta-ketoacyl synthase, C-terminal domain DYL72_02505 PF00109 Beta-ketoacyl synthase, N-terminal domain DYL72_02510 PF00550 Phosphopantetheine attachment site DYL72_02520 PF00698 Acyl transferase domain DYL72_02525 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DYL72_02525 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DYL72_02530 PF02504 Fatty acid synthesis protein DYL72_02535 PF01783 Ribosomal L32p protein family DYL72_02540 PF02620 Large ribosomal RNA subunit accumulation protein YceD DYL72_02545 PF02545 Maf-like protein DYL72_02550 PF01479 S4 domain DYL72_02550 PF00849 RNA pseudouridylate synthase DYL72_02555 PF10150 Ribonuclease E/G family DYL72_02555 PF00575 S1 RNA binding domain DYL72_02555 PF12111 Polyribonucleotide phosphorylase C terminal DYL72_02565 PF00171 Aldehyde dehydrogenase family DYL72_02565 PF00465 Iron-containing alcohol dehydrogenase DYL72_02570 PF01914 MarC family integral membrane protein DYL72_02575 PF02774 Semialdehyde dehydrogenase, dimerisation domain DYL72_02575 PF01118 Semialdehyde dehydrogenase, NAD binding domain DYL72_02580 PF03553 Na+/H+ antiporter family DYL72_02585 PF13006 Insertion element 4 transposase N-terminal DYL72_02585 PF01609 Transposase DDE domain DYL72_02595 PF04245 37-kD nucleoid-associated bacterial protein DYL72_02600 PF07208 Protein of unknown function (DUF1414) DYL72_02605 PF11893 Domain of unknown function (DUF3413) DYL72_02605 PF00884 Sulfatase DYL72_02615 PF00384 Molybdopterin oxidoreductase DYL72_02670 PF13358 DDE superfamily endonuclease DYL72_02685 PF04717 Type VI secretion system, phage-baseplate injector DYL72_02685 PF16671 Actin cross-linking domain DYL72_02690 PF05638 Type VI secretion system effector, Hcp DYL72_02715 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DYL72_02715 PF11867 Domain of unknown function (DUF3387) DYL72_02715 PF18766 SWI2/SNF2 ATPase DYL72_02720 PF00270 DEAD/DEAH box helicase DYL72_02720 PF13749 Putative ATP-dependent DNA helicase recG C-terminal DYL72_02720 PF17191 RecG wedge domain DYL72_02730 PF01420 Type I restriction modification DNA specificity domain DYL72_02745 PF01751 Toprim domain DYL72_02745 PF01131 DNA topoisomerase DYL72_02780 PF00462 Glutaredoxin DYL72_02785 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DYL72_02785 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DYL72_02800 PF04333 MlaA lipoprotein DYL72_02810 PF03918 Cytochrome C biogenesis protein DYL72_02815 PF08534 Redoxin DYL72_02820 PF01578 Cytochrome C assembly protein DYL72_02820 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DYL72_02825 PF03100 CcmE DYL72_02835 PF01578 Cytochrome C assembly protein DYL72_02840 PF03379 CcmB protein DYL72_02845 PF00005 ABC transporter DYL72_02855 PF01584 CheW-like domain DYL72_02865 PF13614 AAA domain DYL72_02870 PF00072 Response regulator receiver domain DYL72_02870 PF01339 CheB methylesterase DYL72_02875 PF02895 Signal transducing histidine kinase, homodimeric domain DYL72_02875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYL72_02875 PF01627 Hpt domain DYL72_02875 PF01584 CheW-like domain DYL72_02875 PF07194 P2 response regulator binding domain DYL72_02880 PF04344 Chemotaxis phosphatase, CheZ DYL72_02885 PF00072 Response regulator receiver domain DYL72_02890 PF04545 Sigma-70, region 4 DYL72_02890 PF04539 Sigma-70 region 3 DYL72_02890 PF04542 Sigma-70 region 2 DYL72_02895 PF10609 NUBPL iron-transfer P-loop NTPase DYL72_02900 PF00448 SRP54-type protein, GTPase domain DYL72_02905 PF00771 FHIPEP family DYL72_02910 PF00300 Histidine phosphatase superfamily (branch 1) DYL72_02915 PF05193 Peptidase M16 inactive domain DYL72_02915 PF00675 Insulinase (Peptidase family M16) DYL72_02920 PF06185 YecM protein DYL72_02925 PF05746 DALR anticodon binding domain DYL72_02925 PF00750 tRNA synthetases class I (R) DYL72_02925 PF03485 Arginyl tRNA synthetase N terminal domain DYL72_02940 PF07664 Ferrous iron transport protein B C terminus DYL72_02940 PF02421 Ferrous iron transport protein B DYL72_02940 PF07670 Nucleoside recognition DYL72_02945 PF04023 FeoA domain DYL72_02950 PF12833 Helix-turn-helix domain DYL72_02950 PF02311 AraC-like ligand binding domain DYL72_02955 PF01297 Zinc-uptake complex component A periplasmic DYL72_02960 PF00005 ABC transporter DYL72_02965 PF00950 ABC 3 transport family DYL72_02970 PF00549 CoA-ligase DYL72_02970 PF02629 CoA binding domain DYL72_02975 PF00549 CoA-ligase DYL72_02975 PF08442 ATP-grasp domain DYL72_02980 PF00364 Biotin-requiring enzyme DYL72_02980 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DYL72_02980 PF02817 e3 binding domain DYL72_02985 PF02779 Transketolase, pyrimidine binding domain DYL72_02985 PF16870 2-oxoglutarate dehydrogenase C-terminal DYL72_02985 PF00676 Dehydrogenase E1 component DYL72_02985 PF16078 2-oxoglutarate dehydrogenase N-terminus DYL72_02990 PF13085 2Fe-2S iron-sulfur cluster binding domain DYL72_02995 PF00890 FAD binding domain DYL72_02995 PF02910 Fumarate reductase flavoprotein C-term DYL72_03000 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DYL72_03005 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DYL72_03010 PF00285 Citrate synthase, C-terminal domain DYL72_03015 PF01784 NIF3 (NGG1p interacting factor 3) DYL72_03025 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DYL72_03025 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DYL72_03025 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DYL72_03025 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DYL72_03030 PF17206 SeqA protein N-terminal domain DYL72_03030 PF03925 SeqA protein C-terminal domain DYL72_03035 PF12697 Alpha/beta hydrolase family DYL72_03045 PF00258 Flavodoxin DYL72_03050 PF04172 LrgB-like family DYL72_03055 PF03788 LrgA family DYL72_03060 PF03466 LysR substrate binding domain DYL72_03060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_03070 PF01475 Ferric uptake regulator family DYL72_03075 PF02774 Semialdehyde dehydrogenase, dimerisation domain DYL72_03075 PF01118 Semialdehyde dehydrogenase, NAD binding domain DYL72_03080 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DYL72_03080 PF11890 Domain of unknown function (DUF3410) DYL72_03080 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DYL72_03085 PF00109 Beta-ketoacyl synthase, N-terminal domain DYL72_03085 PF02801 Beta-ketoacyl synthase, C-terminal domain DYL72_03090 PF05430 S-adenosyl-L-methionine-dependent methyltransferase DYL72_03090 PF01266 FAD dependent oxidoreductase DYL72_03095 PF03358 NADPH-dependent FMN reductase DYL72_03100 PF08891 YfcL protein DYL72_03105 PF04315 Elongation factor P hydroxylase DYL72_03110 PF01610 Transposase DYL72_03110 PF13542 Helix-turn-helix domain of transposase family ISL3 DYL72_03110 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DYL72_03115 PF03458 UPF0126 domain DYL72_03120 PF01264 Chorismate synthase DYL72_03125 PF05175 Methyltransferase small domain DYL72_03130 PF01713 Smr domain DYL72_03135 PF01312 FlhB HrpN YscU SpaS Family DYL72_03140 PF01311 Bacterial export proteins, family 1 DYL72_03145 PF01313 Bacterial export proteins, family 3 DYL72_03150 PF00813 FliP family DYL72_03155 PF04347 Flagellar biosynthesis protein, FliO DYL72_03160 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DYL72_03165 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DYL72_03165 PF02154 Flagellar motor switch protein FliM DYL72_03185 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DYL72_03185 PF18269 T3SS EscN ATPase C-terminal domain DYL72_03195 PF14841 FliG middle domain DYL72_03195 PF14842 FliG N-terminal domain DYL72_03195 PF01706 FliG C-terminal domain DYL72_03200 PF08345 Flagellar M-ring protein C-terminal DYL72_03200 PF01514 Secretory protein of YscJ/FliF family DYL72_03205 PF02049 Flagellar hook-basal body complex protein FliE DYL72_03210 PF00072 Response regulator receiver domain DYL72_03210 PF02954 Bacterial regulatory protein, Fis family DYL72_03210 PF00158 Sigma-54 interaction domain DYL72_03215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYL72_03215 PF00512 His Kinase A (phospho-acceptor) domain DYL72_03220 PF00158 Sigma-54 interaction domain DYL72_03220 PF00072 Response regulator receiver domain DYL72_03220 PF02954 Bacterial regulatory protein, Fis family DYL72_03225 PF02561 Flagellar protein FliS DYL72_03235 PF07196 Flagellin hook IN motif DYL72_03235 PF07195 Flagellar hook-associated protein 2 C-terminus DYL72_03235 PF02465 Flagellar hook-associated protein 2 N-terminus DYL72_03240 PF03646 FlaG protein DYL72_03245 PF00669 Bacterial flagellin N-terminal helical region DYL72_03245 PF07196 Flagellin hook IN motif DYL72_03245 PF00700 Bacterial flagellin C-terminal helical region DYL72_03250 PF07196 Flagellin hook IN motif DYL72_03250 PF00700 Bacterial flagellin C-terminal helical region DYL72_03250 PF00669 Bacterial flagellin N-terminal helical region DYL72_03255 PF00669 Bacterial flagellin N-terminal helical region DYL72_03255 PF07196 Flagellin hook IN motif DYL72_03255 PF00700 Bacterial flagellin C-terminal helical region DYL72_03260 PF04261 Dyp-type peroxidase family DYL72_03265 PF11143 Protein of unknown function (DUF2919) DYL72_03285 PF03960 ArsC family DYL72_03290 PF01546 Peptidase family M20/M25/M40 DYL72_03290 PF07687 Peptidase dimerisation domain DYL72_03310 PF00701 Dihydrodipicolinate synthetase family DYL72_03330 PF03050 Transposase IS66 family DYL72_03330 PF13005 zinc-finger binding domain of transposase IS66 DYL72_03330 PF13007 Transposase C of IS166 homeodomain DYL72_03330 PF13817 IS66 C-terminal element DYL72_03365 PF00578 AhpC/TSA family DYL72_03410 PF13817 IS66 C-terminal element DYL72_03410 PF13005 zinc-finger binding domain of transposase IS66 DYL72_03410 PF03050 Transposase IS66 family DYL72_03410 PF13007 Transposase C of IS166 homeodomain DYL72_03430 PF13007 Transposase C of IS166 homeodomain DYL72_03430 PF13005 zinc-finger binding domain of transposase IS66 DYL72_03430 PF13817 IS66 C-terminal element DYL72_03430 PF03050 Transposase IS66 family DYL72_03435 PF13091 PLD-like domain DYL72_03435 PF13087 AAA domain DYL72_03440 PF07804 HipA-like C-terminal domain DYL72_03440 PF13657 HipA N-terminal domain DYL72_03460 PF14464 Prokaryotic homologs of the JAB domain DYL72_03475 PF00578 AhpC/TSA family DYL72_03480 PF00672 HAMP domain DYL72_03480 PF02743 Cache domain DYL72_03480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYL72_03485 PF01594 AI-2E family transporter DYL72_03495 PF13181 Tetratricopeptide repeat DYL72_03495 PF01435 Peptidase family M48 DYL72_03500 PF03960 ArsC family DYL72_03505 PF03358 NADPH-dependent FMN reductase DYL72_03520 PF00860 Permease family DYL72_03525 PF04073 Aminoacyl-tRNA editing domain DYL72_03530 PF02872 5'-nucleotidase, C-terminal domain DYL72_03530 PF00149 Calcineurin-like phosphoesterase DYL72_03535 PF00793 DAHP synthetase I family DYL72_03540 PF13369 Transglutaminase-like superfamily DYL72_03545 PF04247 Invasion gene expression up-regulator, SirB DYL72_03550 PF13847 Methyltransferase domain DYL72_03550 PF17827 PrmC N-terminal domain DYL72_03555 PF03462 PCRF domain DYL72_03555 PF00472 RF-1 domain DYL72_03560 PF01488 Shikimate / quinate 5-dehydrogenase DYL72_03560 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DYL72_03560 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DYL72_03565 PF03550 Outer membrane lipoprotein LolB DYL72_03570 PF00288 GHMP kinases N terminal domain DYL72_03570 PF08544 GHMP kinases C terminal DYL72_03575 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DYL72_03575 PF14572 Phosphoribosyl synthetase-associated domain DYL72_03580 PF01195 Peptidyl-tRNA hydrolase DYL72_03585 PF06071 Protein of unknown function (DUF933) DYL72_03585 PF01926 50S ribosome-binding GTPase DYL72_03670 PF07196 Flagellin hook IN motif DYL72_03670 PF00669 Bacterial flagellin N-terminal helical region DYL72_03670 PF00700 Bacterial flagellin C-terminal helical region DYL72_03675 PF00700 Bacterial flagellin C-terminal helical region DYL72_03675 PF00669 Bacterial flagellin N-terminal helical region DYL72_03675 PF07196 Flagellin hook IN motif DYL72_03685 PF00669 Bacterial flagellin N-terminal helical region DYL72_03690 PF07196 Flagellin hook IN motif DYL72_03690 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DYL72_03695 PF10135 Rod binding protein DYL72_03695 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DYL72_03700 PF02119 Flagellar P-ring protein DYL72_03705 PF02107 Flagellar L-ring protein DYL72_03710 PF00460 Flagella basal body rod protein DYL72_03710 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DYL72_03715 PF00460 Flagella basal body rod protein DYL72_03715 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DYL72_03720 PF00460 Flagella basal body rod protein DYL72_03720 PF07559 Flagellar basal body protein FlaE DYL72_03720 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DYL72_03725 PF03963 Flagellar hook capping protein - N-terminal region DYL72_03725 PF13861 FlgD Tudor-like domain DYL72_03725 PF13860 FlgD Ig-like domain DYL72_03730 PF00460 Flagella basal body rod protein DYL72_03730 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DYL72_03735 PF00460 Flagella basal body rod protein DYL72_03740 PF01739 CheR methyltransferase, SAM binding domain DYL72_03740 PF03705 CheR methyltransferase, all-alpha domain DYL72_03745 PF00072 Response regulator receiver domain DYL72_03745 PF01584 CheW-like domain DYL72_03755 PF04316 Anti-sigma-28 factor, FlgM DYL72_03790 PF01389 OmpA-like transmembrane domain DYL72_03790 PF00691 OmpA family DYL72_03795 PF00749 tRNA synthetases class I (E and Q), catalytic domain DYL72_03800 PF00403 Heavy-metal-associated domain DYL72_03810 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain DYL72_03810 PF02838 Glycosyl hydrolase family 20, domain 2 DYL72_03810 PF03173 Putative carbohydrate binding domain DYL72_03810 PF00728 Glycosyl hydrolase family 20, catalytic domain DYL72_03825 PF01609 Transposase DDE domain DYL72_03825 PF13006 Insertion element 4 transposase N-terminal DYL72_03830 PF01479 S4 domain DYL72_03830 PF00849 RNA pseudouridylate synthase DYL72_03840 PF00586 AIR synthase related protein, N-terminal domain DYL72_03840 PF02769 AIR synthase related protein, C-terminal domain DYL72_03845 PF00551 Formyl transferase DYL72_03850 PF13230 Glutamine amidotransferases class-II DYL72_03855 PF13580 SIS domain DYL72_03860 PF02770 Acyl-CoA dehydrogenase, middle domain DYL72_03860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DYL72_03860 PF09317 Domain of unknown function (DUF1974) DYL72_03860 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DYL72_03870 PF00929 Exonuclease DYL72_03875 PF00075 RNase H DYL72_03880 PF08241 Methyltransferase domain DYL72_03885 PF16123 Hydroxyacylglutathione hydrolase C-terminus DYL72_03885 PF00753 Metallo-beta-lactamase superfamily DYL72_03890 PF01476 LysM domain DYL72_03890 PF01464 Transglycosylase SLT domain DYL72_03900 PF03372 Endonuclease/Exonuclease/phosphatase family DYL72_03905 PF00543 Nitrogen regulatory protein P-II DYL72_03910 PF00034 Cytochrome c DYL72_03915 PF09179 TilS substrate binding domain DYL72_03915 PF11734 TilS substrate C-terminal domain DYL72_03915 PF01171 PP-loop family DYL72_03920 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DYL72_03925 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DYL72_03925 PF14579 Helix-hairpin-helix motif DYL72_03925 PF02811 PHP domain DYL72_03925 PF01336 OB-fold nucleic acid binding domain DYL72_03925 PF07733 Bacterial DNA polymerase III alpha NTPase domain DYL72_03930 PF01351 Ribonuclease HII DYL72_03935 PF02684 Lipid-A-disaccharide synthetase DYL72_03940 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DYL72_03940 PF00132 Bacterial transferase hexapeptide (six repeats) DYL72_03945 PF07977 FabA-like domain DYL72_03950 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DYL72_03950 PF00132 Bacterial transferase hexapeptide (six repeats) DYL72_03955 PF03938 Outer membrane protein (OmpH-like) DYL72_03960 PF01103 Surface antigen DYL72_03960 PF07244 Surface antigen variable number repeat DYL72_03965 PF02163 Peptidase family M50 DYL72_03965 PF17820 PDZ domain DYL72_03970 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DYL72_03970 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DYL72_03970 PF13288 DXP reductoisomerase C-terminal domain DYL72_03980 PF01255 Putative undecaprenyl diphosphate synthase DYL72_03985 PF01765 Ribosome recycling factor DYL72_03990 PF00696 Amino acid kinase family DYL72_03995 PF00889 Elongation factor TS DYL72_04000 PF00318 Ribosomal protein S2 DYL72_04005 PF00557 Metallopeptidase family M24 DYL72_04015 PF11944 Protein of unknown function (DUF3461) DYL72_04020 PF04608 Phosphatidylglycerophosphatase A DYL72_04025 PF02769 AIR synthase related protein, C-terminal domain DYL72_04025 PF00586 AIR synthase related protein, N-terminal domain DYL72_04035 PF00885 6,7-dimethyl-8-ribityllumazine synthase DYL72_04040 PF00925 GTP cyclohydrolase II DYL72_04040 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DYL72_04045 PF00677 Lumazine binding domain DYL72_04050 PF01872 RibD C-terminal domain DYL72_04050 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DYL72_04055 PF03477 ATP cone domain DYL72_04060 PF00171 Aldehyde dehydrogenase family DYL72_04065 PF00696 Amino acid kinase family DYL72_04065 PF01472 PUA domain DYL72_04070 PF07417 Sigma factor-binding transcriptional regulator Crl DYL72_04085 PF00860 Permease family DYL72_04090 PF01546 Peptidase family M20/M25/M40 DYL72_04090 PF07687 Peptidase dimerisation domain DYL72_04095 PF18030 RimK PreATP-grasp domain DYL72_04095 PF08443 RimK-like ATP-grasp domain DYL72_04100 PF18030 RimK PreATP-grasp domain DYL72_04100 PF08443 RimK-like ATP-grasp domain DYL72_04110 PF00209 Sodium:neurotransmitter symporter family DYL72_04115 PF00563 EAL domain DYL72_04115 PF00990 Diguanylate cyclase, GGDEF domain DYL72_04115 PF01590 GAF domain DYL72_04115 PF00360 Phytochrome region DYL72_04125 PF11798 IMS family HHH motif DYL72_04125 PF11799 impB/mucB/samB family C-terminal domain DYL72_04125 PF00817 impB/mucB/samB family DYL72_04135 PF02424 ApbE family DYL72_04140 PF00111 2Fe-2S iron-sulfur cluster binding domain DYL72_04140 PF00970 Oxidoreductase FAD-binding domain DYL72_04140 PF00175 Oxidoreductase NAD-binding domain DYL72_04145 PF02508 Rnf-Nqr subunit, membrane protein DYL72_04150 PF02508 Rnf-Nqr subunit, membrane protein DYL72_04155 PF04205 FMN-binding domain DYL72_04160 PF03116 NQR2, RnfD, RnfE family DYL72_04165 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) DYL72_04165 PF11973 NQRA C-terminal domain DYL72_04170 PF01722 BolA-like protein DYL72_04175 PF05175 Methyltransferase small domain DYL72_04185 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DYL72_04190 PF07690 Major Facilitator Superfamily DYL72_04200 PF04545 Sigma-70, region 4 DYL72_04200 PF04542 Sigma-70 region 2 DYL72_04210 PF03502 Nucleoside-specific channel-forming protein, Tsx DYL72_04215 PF08546 Ketopantoate reductase PanE/ApbA C terminal DYL72_04215 PF02558 Ketopantoate reductase PanE/ApbA DYL72_04220 PF01965 DJ-1/PfpI family DYL72_04225 PF00266 Aminotransferase class-V DYL72_04230 PF02657 Fe-S metabolism associated domain DYL72_04235 PF00899 ThiF family DYL72_04240 PF06725 3D domain DYL72_04240 PF03562 MltA specific insert domain DYL72_04250 PF00583 Acetyltransferase (GNAT) family DYL72_04250 PF00696 Amino acid kinase family DYL72_04260 PF13538 UvrD-like helicase C-terminal domain DYL72_04265 PF12705 PD-(D/E)XK nuclease superfamily DYL72_04265 PF13361 UvrD-like helicase C-terminal domain DYL72_04265 PF00580 UvrD/REP helicase N-terminal domain DYL72_04270 PF17946 RecC C-terminal domain DYL72_04285 PF07130 YebG protein DYL72_04290 PF14602 Hexapeptide repeat of succinyl-transferase DYL72_04290 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle DYL72_04300 PF00583 Acetyltransferase (GNAT) family DYL72_04310 PF01544 CorA-like Mg2+ transporter protein DYL72_04320 PF00356 Bacterial regulatory proteins, lacI family DYL72_04325 PF08544 GHMP kinases C terminal DYL72_04325 PF00288 GHMP kinases N terminal domain DYL72_04325 PF10509 Galactokinase galactose-binding signature DYL72_04330 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain DYL72_04330 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain DYL72_04345 PF11849 Domain of unknown function (DUF3369) DYL72_04350 PF00501 AMP-binding enzyme DYL72_04355 PF09905 DNA-binding protein VF530 DYL72_04360 PF03144 Elongation factor Tu domain 2 DYL72_04360 PF00009 Elongation factor Tu GTP binding domain DYL72_04360 PF03764 Elongation factor G, domain IV DYL72_04360 PF14492 Elongation Factor G, domain II DYL72_04360 PF00679 Elongation factor G C-terminus DYL72_04365 PF18073 Rubredoxin metal binding domain DYL72_04375 PF18429 Domain of unknown function (DUF5609) DYL72_04385 PF01048 Phosphorylase superfamily DYL72_04390 PF01676 Metalloenzyme superfamily DYL72_04395 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DYL72_04395 PF00591 Glycosyl transferase family, a/b domain DYL72_04395 PF02885 Glycosyl transferase family, helical bundle domain DYL72_04400 PF01791 DeoC/LacD family aldolase DYL72_04405 PF01773 Na+ dependent nucleoside transporter N-terminus DYL72_04405 PF07662 Na+ dependent nucleoside transporter C-terminus DYL72_04405 PF07670 Nucleoside recognition DYL72_04410 PF01026 TatD related DNase DYL72_04420 PF01235 Sodium:alanine symporter family DYL72_04435 PF03167 Uracil DNA glycosylase superfamily DYL72_04440 PF01261 Xylose isomerase-like TIM barrel DYL72_04445 PF01228 Glycine radical DYL72_04450 PF14821 Threonine synthase N terminus DYL72_04450 PF00291 Pyridoxal-phosphate dependent enzyme DYL72_04455 PF08544 GHMP kinases C terminal DYL72_04455 PF00288 GHMP kinases N terminal domain DYL72_04460 PF01842 ACT domain DYL72_04460 PF03447 Homoserine dehydrogenase, NAD binding domain DYL72_04460 PF13840 ACT domain DYL72_04460 PF00742 Homoserine dehydrogenase DYL72_04460 PF00696 Amino acid kinase family DYL72_04475 PF03737 Aldolase/RraA DYL72_04480 PF13358 DDE superfamily endonuclease DYL72_04485 PF00072 Response regulator receiver domain DYL72_04485 PF00486 Transcriptional regulatory protein, C terminal DYL72_04495 PF00072 Response regulator receiver domain DYL72_04495 PF18415 Histidine kinase receptor ArcB trans-membrane domain DYL72_04495 PF00512 His Kinase A (phospho-acceptor) domain DYL72_04495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYL72_04495 PF00989 PAS fold DYL72_04495 PF01627 Hpt domain DYL72_04500 PF04055 Radical SAM superfamily DYL72_04500 PF16199 Radical_SAM C-terminal domain DYL72_04505 PF01645 Conserved region in glutamate synthase DYL72_04505 PF04898 Glutamate synthase central domain DYL72_04505 PF01493 GXGXG motif DYL72_04505 PF00310 Glutamine amidotransferases class-II DYL72_04510 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DYL72_04510 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYL72_04515 PF04898 Glutamate synthase central domain DYL72_04515 PF00310 Glutamine amidotransferases class-II DYL72_04515 PF01645 Conserved region in glutamate synthase DYL72_04515 PF01493 GXGXG motif DYL72_04520 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DYL72_04520 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYL72_04540 PF01497 Periplasmic binding protein DYL72_04545 PF03458 UPF0126 domain DYL72_04550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_04550 PF03466 LysR substrate binding domain DYL72_04555 PF01925 Sulfite exporter TauE/SafE DYL72_04560 PF02142 MGS-like domain DYL72_04560 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DYL72_04560 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DYL72_04565 PF00117 Glutamine amidotransferase class-I DYL72_04565 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DYL72_04575 PF00293 NUDIX domain DYL72_04580 PF07516 SecA Wing and Scaffold domain DYL72_04580 PF07517 SecA DEAD-like domain DYL72_04580 PF02810 SEC-C motif DYL72_04580 PF01043 SecA preprotein cross-linking domain DYL72_04590 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DYL72_04595 PF00091 Tubulin/FtsZ family, GTPase domain DYL72_04595 PF12327 FtsZ family, C-terminal domain DYL72_04600 PF02491 SHS2 domain inserted in FTSA DYL72_04605 PF08478 POTRA domain, FtsQ-type DYL72_04605 PF03799 Cell division protein FtsQ DYL72_04610 PF08245 Mur ligase middle domain DYL72_04610 PF01225 Mur ligase family, catalytic domain DYL72_04610 PF02875 Mur ligase family, glutamate ligase domain DYL72_04615 PF03033 Glycosyltransferase family 28 N-terminal domain DYL72_04615 PF04101 Glycosyltransferase family 28 C-terminal domain DYL72_04620 PF01098 Cell cycle protein DYL72_04625 PF02875 Mur ligase family, glutamate ligase domain DYL72_04625 PF08245 Mur ligase middle domain DYL72_04630 PF00953 Glycosyl transferase family 4 DYL72_04630 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DYL72_04635 PF08245 Mur ligase middle domain DYL72_04635 PF01225 Mur ligase family, catalytic domain DYL72_04635 PF02875 Mur ligase family, glutamate ligase domain DYL72_04640 PF08245 Mur ligase middle domain DYL72_04640 PF02875 Mur ligase family, glutamate ligase domain DYL72_04640 PF01225 Mur ligase family, catalytic domain DYL72_04645 PF03717 Penicillin-binding Protein dimerisation domain DYL72_04645 PF00905 Penicillin binding protein transpeptidase domain DYL72_04650 PF04999 Cell division protein FtsL DYL72_04655 PF01795 MraW methylase family DYL72_04665 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DYL72_04670 PF04348 LppC putative lipoprotein DYL72_04675 PF02021 Uncharacterised protein family UPF0102 DYL72_04680 PF13580 SIS domain DYL72_04685 PF04972 BON domain DYL72_04690 PF04386 Stringent starvation protein B DYL72_04695 PF02798 Glutathione S-transferase, N-terminal domain DYL72_04695 PF00043 Glutathione S-transferase, C-terminal domain DYL72_04700 PF02167 Cytochrome C1 family DYL72_04705 PF00032 Cytochrome b(C-terminal)/b6/petD DYL72_04705 PF00033 Cytochrome b/b6/petB DYL72_04710 PF00355 Rieske [2Fe-2S] domain DYL72_04710 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal DYL72_04715 PF00380 Ribosomal protein S9/S16 DYL72_04720 PF00572 Ribosomal protein L13 DYL72_04730 PF03969 AFG1-like ATPase DYL72_04735 PF06295 Protein of unknown function (DUF1043) DYL72_04740 PF00595 PDZ domain DYL72_04745 PF13180 PDZ domain DYL72_04750 PF03989 DNA gyrase C-terminal domain, beta-propeller DYL72_04750 PF00521 DNA gyrase/topoisomerase IV, subunit A DYL72_04755 PF00204 DNA gyrase B DYL72_04755 PF01751 Toprim domain DYL72_04755 PF00986 DNA gyrase B subunit, carboxyl terminus DYL72_04755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYL72_04760 PF05728 Uncharacterised protein family (UPF0227) DYL72_04765 PF00149 Calcineurin-like phosphoesterase DYL72_04770 PF06853 Protein of unknown function (DUF1249) DYL72_04775 PF00293 NUDIX domain DYL72_04780 PF02321 Outer membrane efflux protein DYL72_04785 PF00294 pfkB family carbohydrate kinase DYL72_04785 PF01467 Cytidylyltransferase-like DYL72_04790 PF08335 GlnD PII-uridylyltransferase DYL72_04790 PF03710 Glutamate-ammonia ligase adenylyltransferase DYL72_04795 PF00672 HAMP domain DYL72_04795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYL72_04805 PF01928 CYTH domain DYL72_04810 PF01865 Protein of unknown function DUF47 DYL72_04815 PF01384 Phosphate transporter family DYL72_04820 PF08239 Bacterial SH3 domain DYL72_04830 PF13401 AAA domain DYL72_04830 PF01471 Putative peptidoglycan binding domain DYL72_04835 PF01743 Poly A polymerase head domain DYL72_04835 PF01966 HD domain DYL72_04835 PF12627 Probable RNA and SrmB- binding site of polymerase A DYL72_04840 PF03952 Enolase, N-terminal domain DYL72_04840 PF00113 Enolase, C-terminal TIM barrel domain DYL72_04845 PF06418 CTP synthase N-terminus DYL72_04845 PF00117 Glutamine amidotransferase class-I DYL72_04850 PF03819 MazG nucleotide pyrophosphohydrolase domain DYL72_04855 PF13291 ACT domain DYL72_04855 PF04607 Region found in RelA / SpoT proteins DYL72_04855 PF02824 TGS domain DYL72_04860 PF05958 tRNA (Uracil-5-)-methyltransferase DYL72_04860 PF01938 TRAM domain DYL72_04865 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DYL72_04865 PF00672 HAMP domain DYL72_04865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYL72_04865 PF00512 His Kinase A (phospho-acceptor) domain DYL72_04865 PF01627 Hpt domain DYL72_04865 PF00072 Response regulator receiver domain DYL72_04870 PF01648 4'-phosphopantetheinyl transferase superfamily DYL72_04875 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DYL72_04885 PF07650 KH domain DYL72_04885 PF01926 50S ribosome-binding GTPase DYL72_04895 PF10502 Signal peptidase, peptidase S26 DYL72_04900 PF03144 Elongation factor Tu domain 2 DYL72_04900 PF00009 Elongation factor Tu GTP binding domain DYL72_04900 PF00679 Elongation factor G C-terminus DYL72_04900 PF06421 GTP-binding protein LepA C-terminus DYL72_04910 PF17188 MucB/RseB C-terminal domain DYL72_04910 PF03888 MucB/RseB N-terminal domain DYL72_04915 PF03872 Anti sigma-E protein RseA, N-terminal domain DYL72_04915 PF03873 Anti sigma-E protein RseA, C-terminal domain DYL72_04920 PF04542 Sigma-70 region 2 DYL72_04920 PF08281 Sigma-70, region 4 DYL72_04925 PF02910 Fumarate reductase flavoprotein C-term DYL72_04925 PF00890 FAD binding domain DYL72_04935 PF03937 Flavinator of succinate dehydrogenase DYL72_04955 PF01494 FAD binding domain DYL72_04960 PF01494 FAD binding domain DYL72_04970 PF05164 Cell division protein ZapA DYL72_04980 PF01812 5-formyltetrahydrofolate cyclo-ligase family DYL72_04985 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DYL72_04990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DYL72_04990 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DYL72_04990 PF01842 ACT domain DYL72_04995 PF10369 Small subunit of acetolactate synthase DYL72_05000 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DYL72_05000 PF00205 Thiamine pyrophosphate enzyme, central domain DYL72_05000 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DYL72_05005 PF00501 AMP-binding enzyme DYL72_05010 PF03466 LysR substrate binding domain DYL72_05010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_05015 PF13358 DDE superfamily endonuclease DYL72_05025 PF01569 PAP2 superfamily DYL72_05030 PF00682 HMGL-like DYL72_05030 PF08502 LeuA allosteric (dimerisation) domain DYL72_05035 PF00180 Isocitrate/isopropylmalate dehydrogenase DYL72_05040 PF00330 Aconitase family (aconitate hydratase) DYL72_05045 PF00694 Aconitase C-terminal domain DYL72_05095 PF00872 Transposase, Mutator family DYL72_05115 PF03739 Lipopolysaccharide export system permease LptF/LptG DYL72_05120 PF03739 Lipopolysaccharide export system permease LptF/LptG DYL72_05125 PF00883 Cytosol aminopeptidase family, catalytic domain DYL72_05125 PF02789 Cytosol aminopeptidase family, N-terminal domain DYL72_05130 PF04364 DNA polymerase III chi subunit, HolC DYL72_05135 PF08264 Anticodon-binding domain of tRNA DYL72_05135 PF10458 Valyl tRNA synthetase tRNA binding arm DYL72_05135 PF00133 tRNA synthetases class I (I, L, M and V) DYL72_05140 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DYL72_05140 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DYL72_05145 PF00849 RNA pseudouridylate synthase DYL72_05155 PF00176 SNF2 family N-terminal domain DYL72_05155 PF18337 RapA N-terminal Tudor like domain DYL72_05155 PF12137 RNA polymerase recycling family C-terminal DYL72_05155 PF00271 Helicase conserved C-terminal domain DYL72_05155 PF18339 RapA N-terminal Tudor like domain 1 DYL72_05165 PF13638 PIN domain DYL72_05165 PF02562 PhoH-like protein DYL72_05170 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DYL72_05170 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DYL72_05175 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DYL72_05175 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DYL72_05180 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain DYL72_05180 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain DYL72_05185 PF01042 Endoribonuclease L-PSP DYL72_05195 PF00512 His Kinase A (phospho-acceptor) domain DYL72_05195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYL72_05195 PF08448 PAS fold DYL72_05195 PF00072 Response regulator receiver domain DYL72_05195 PF13188 PAS domain DYL72_05200 PF01553 Acyltransferase DYL72_05205 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DYL72_05210 PF01722 BolA-like protein DYL72_05220 PF05494 MlaC protein DYL72_05225 PF02470 MlaD protein DYL72_05230 PF02405 Permease MlaE DYL72_05235 PF00005 ABC transporter DYL72_05240 PF01699 Sodium/calcium exchanger protein DYL72_05245 PF01380 SIS domain DYL72_05245 PF00571 CBS domain DYL72_05260 PF03968 OstA-like protein DYL72_05265 PF00005 ABC transporter DYL72_05265 PF12399 Branched-chain amino acid ATP-binding cassette transporter DYL72_05270 PF04963 Sigma-54 factor, core binding domain DYL72_05270 PF04552 Sigma-54, DNA binding domain DYL72_05270 PF00309 Sigma-54 factor, Activator interacting domain (AID) DYL72_05275 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DYL72_05280 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DYL72_05285 PF03668 P-loop ATPase protein family DYL72_05290 PF00381 PTS HPr component phosphorylation site DYL72_05295 PF00571 CBS domain DYL72_05295 PF01769 Divalent cation transporter DYL72_05295 PF03448 MgtE intracellular N domain DYL72_05300 PF01523 Putative modulator of DNA gyrase DYL72_05305 PF04751 Protein of unknown function (DUF615) DYL72_05310 PF00005 ABC transporter DYL72_05315 PF00528 Binding-protein-dependent transport system inner membrane component DYL72_05325 PF02441 Flavoprotein DYL72_05330 PF02875 Mur ligase family, glutamate ligase domain DYL72_05330 PF01225 Mur ligase family, catalytic domain DYL72_05330 PF08245 Mur ligase middle domain DYL72_05335 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain DYL72_05340 PF00719 Inorganic pyrophosphatase DYL72_05345 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like DYL72_05350 PF04357 TamB, inner membrane protein subunit of TAM complex DYL72_05355 PF07244 Surface antigen variable number repeat DYL72_05355 PF17243 POTRA domain TamA domain 1 DYL72_05355 PF01103 Surface antigen DYL72_05360 PF01625 Peptide methionine sulfoxide reductase DYL72_05365 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) DYL72_05380 PF00005 ABC transporter DYL72_05405 PF00009 Elongation factor Tu GTP binding domain DYL72_05410 PF01507 Phosphoadenosine phosphosulfate reductase family DYL72_05415 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DYL72_05415 PF14824 Sirohaem biosynthesis protein central DYL72_05415 PF10414 Sirohaem synthase dimerisation region DYL72_05445 PF13358 DDE superfamily endonuclease DYL72_05470 PF03880 DbpA RNA binding domain DYL72_05470 PF00270 DEAD/DEAH box helicase DYL72_05470 PF00271 Helicase conserved C-terminal domain DYL72_05475 PF13673 Acetyltransferase (GNAT) domain DYL72_05480 PF04225 Opacity-associated protein A LysM-like domain DYL72_05480 PF08525 Opacity-associated protein A N-terminal motif DYL72_05485 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DYL72_05485 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DYL72_05490 PF01196 Ribosomal protein L17 DYL72_05500 PF00163 Ribosomal protein S4/S9 N-terminal domain DYL72_05500 PF01479 S4 domain DYL72_05505 PF00411 Ribosomal protein S11 DYL72_05510 PF00416 Ribosomal protein S13/S18 DYL72_05515 PF00444 Ribosomal protein L36 DYL72_05520 PF00344 SecY translocase DYL72_05525 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DYL72_05530 PF00327 Ribosomal protein L30p/L7e DYL72_05540 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DYL72_05545 PF00347 Ribosomal protein L6 DYL72_05550 PF00410 Ribosomal protein S8 DYL72_05555 PF00253 Ribosomal protein S14p/S29e DYL72_05560 PF00281 Ribosomal protein L5 DYL72_05560 PF00673 ribosomal L5P family C-terminus DYL72_05570 PF00238 Ribosomal protein L14p/L23e DYL72_05575 PF00366 Ribosomal protein S17 DYL72_05580 PF00831 Ribosomal L29 protein DYL72_05585 PF00252 Ribosomal protein L16p/L10e DYL72_05590 PF00189 Ribosomal protein S3, C-terminal domain DYL72_05590 PF07650 KH domain DYL72_05595 PF00237 Ribosomal protein L22p/L17e DYL72_05600 PF00203 Ribosomal protein S19 DYL72_05605 PF03947 Ribosomal Proteins L2, C-terminal domain DYL72_05605 PF00181 Ribosomal Proteins L2, RNA binding domain DYL72_05610 PF00276 Ribosomal protein L23 DYL72_05625 PF00338 Ribosomal protein S10p/S20e DYL72_05630 PF00588 SpoU rRNA Methylase family DYL72_05630 PF08032 RNA 2'-O ribose methyltransferase substrate binding DYL72_05635 PF08206 Ribonuclease B OB domain DYL72_05635 PF00575 S1 RNA binding domain DYL72_05635 PF00773 RNB domain DYL72_05635 PF08461 Ribonuclease R winged-helix domain DYL72_05635 PF17876 Cold shock domain DYL72_05640 PF08238 Sel1 repeat DYL72_05650 PF00709 Adenylosuccinate synthetase DYL72_05655 PF01112 Asparaginase DYL72_05660 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DYL72_05665 PF09526 Probable metal-binding protein (DUF2387) DYL72_05670 PF02254 TrkA-N domain DYL72_05670 PF00999 Sodium/hydrogen exchanger family DYL72_05675 PF02525 Flavodoxin-like fold DYL72_05680 PF00005 ABC transporter DYL72_05680 PF12848 ABC transporter DYL72_05690 PF00561 alpha/beta hydrolase fold DYL72_05695 PF06794 Uncharacterised protein family (UPF0270) DYL72_05700 PF00485 Phosphoribulokinase / Uridine kinase family DYL72_05705 PF00027 Cyclic nucleotide-binding domain DYL72_05705 PF13545 Crp-like helix-turn-helix domain DYL72_05720 PF04958 Arginine N-succinyltransferase beta subunit DYL72_05725 PF00202 Aminotransferase class-III DYL72_05730 PF00117 Glutamine amidotransferase class-I DYL72_05740 PF01494 FAD binding domain DYL72_05750 PF03466 LysR substrate binding domain DYL72_05750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_05765 PF00579 tRNA synthetases class I (W and Y) DYL72_05770 PF13419 Haloacid dehalogenase-like hydrolase DYL72_05775 PF00834 Ribulose-phosphate 3 epimerase family DYL72_05780 PF02086 D12 class N6 adenine-specific DNA methyltransferase DYL72_05795 PF01202 Shikimate kinase DYL72_05800 PF11741 AMIN domain DYL72_05800 PF00263 Bacterial type II and III secretion system protein DYL72_05800 PF03958 Bacterial type II/III secretion system short domain DYL72_05800 PF07660 Secretin and TonB N terminus short domain DYL72_05825 PF17092 Penicillin-binding protein OB-like domain DYL72_05825 PF00912 Transglycosylase DYL72_05825 PF00905 Penicillin binding protein transpeptidase domain DYL72_05830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_05830 PF03466 LysR substrate binding domain DYL72_05835 PF08534 Redoxin DYL72_05835 PF00462 Glutaredoxin DYL72_05840 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYL72_05840 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DYL72_05850 PF00206 Lyase DYL72_05850 PF14698 Argininosuccinate lyase C-terminal DYL72_05850 PF00583 Acetyltransferase (GNAT) family DYL72_05855 PF00764 Arginosuccinate synthase DYL72_05860 PF00696 Amino acid kinase family DYL72_05865 PF02774 Semialdehyde dehydrogenase, dimerisation domain DYL72_05865 PF01118 Semialdehyde dehydrogenase, NAD binding domain DYL72_05885 PF06426 Serine acetyltransferase, N-terminal DYL72_05885 PF00132 Bacterial transferase hexapeptide (six repeats) DYL72_05890 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DYL72_05890 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DYL72_05895 PF02556 Preprotein translocase subunit SecB DYL72_05900 PF00581 Rhodanese-like domain DYL72_05905 PF00152 tRNA synthetases class II (D, K and N) DYL72_05910 PF02910 Fumarate reductase flavoprotein C-term DYL72_05910 PF00890 FAD binding domain DYL72_05915 PF13183 4Fe-4S dicluster domain DYL72_05915 PF13085 2Fe-2S iron-sulfur cluster binding domain DYL72_05920 PF02300 Fumarate reductase subunit C DYL72_05925 PF02313 Fumarate reductase subunit D DYL72_05930 PF08207 Elongation factor P (EF-P) KOW-like domain DYL72_05930 PF09285 Elongation factor P, C-terminal DYL72_05930 PF01132 Elongation factor P (EF-P) OB domain DYL72_05940 PF02308 MgtC family DYL72_05955 PF01348 Type II intron maturase DYL72_05955 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DYL72_05960 PF00118 TCP-1/cpn60 chaperonin family DYL72_05965 PF00166 Chaperonin 10 Kd subunit DYL72_05990 PF00121 Triosephosphate isomerase DYL72_05995 PF01554 MatE DYL72_06065 PF03737 Aldolase/RraA DYL72_06070 PF01040 UbiA prenyltransferase family DYL72_06075 PF10431 C-terminal, D2-small domain, of ClpB protein DYL72_06075 PF00004 ATPase family associated with various cellular activities (AAA) DYL72_06075 PF07724 AAA domain (Cdc48 subfamily) DYL72_06080 PF00227 Proteasome subunit DYL72_06090 PF00356 Bacterial regulatory proteins, lacI family DYL72_06095 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DYL72_06095 PF18074 Primosomal protein N C-terminal domain DYL72_06095 PF00270 DEAD/DEAH box helicase DYL72_06095 PF00271 Helicase conserved C-terminal domain DYL72_06095 PF17764 3′ DNA-binding domain (3′BD) DYL72_06100 PF01197 Ribosomal protein L31 DYL72_06105 PF03949 Malic enzyme, NAD binding domain DYL72_06105 PF00390 Malic enzyme, N-terminal domain DYL72_06110 PF01340 Met Apo-repressor, MetJ DYL72_06115 PF01053 Cys/Met metabolism PLP-dependent enzyme DYL72_06120 PF03447 Homoserine dehydrogenase, NAD binding domain DYL72_06120 PF00742 Homoserine dehydrogenase DYL72_06120 PF00696 Amino acid kinase family DYL72_06125 PF01609 Transposase DDE domain DYL72_06125 PF13006 Insertion element 4 transposase N-terminal DYL72_06130 PF02219 Methylenetetrahydrofolate reductase DYL72_06140 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DYL72_06145 PF00365 Phosphofructokinase DYL72_06150 PF16916 Dimerisation domain of Zinc Transporter DYL72_06150 PF01545 Cation efflux family DYL72_06160 PF00072 Response regulator receiver domain DYL72_06160 PF00486 Transcriptional regulatory protein, C terminal DYL72_06165 PF16527 Two-component sensor protein CpxA, periplasmic domain DYL72_06165 PF00672 HAMP domain DYL72_06165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYL72_06165 PF00512 His Kinase A (phospho-acceptor) domain DYL72_06170 PF00588 SpoU rRNA Methylase family DYL72_06175 PF00313 'Cold-shock' DNA-binding domain DYL72_06180 PF04186 FxsA cytoplasmic membrane protein DYL72_06185 PF00206 Lyase DYL72_06185 PF10415 Fumarase C C-terminus DYL72_06190 PF03605 Anaerobic c4-dicarboxylate membrane transporter DYL72_06195 PF03606 C4-dicarboxylate anaerobic carrier DYL72_06200 PF13358 DDE superfamily endonuclease DYL72_06210 PF00696 Amino acid kinase family DYL72_06215 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DYL72_06215 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DYL72_06220 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DYL72_06220 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DYL72_06225 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain DYL72_06225 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain DYL72_06230 PF02863 Arginine repressor, C-terminal domain DYL72_06230 PF01316 Arginine repressor, DNA binding domain DYL72_06235 PF02683 Cytochrome C biogenesis protein transmembrane region DYL72_06235 PF11412 Disulphide bond corrector protein DsbC DYL72_06240 PF00072 Response regulator receiver domain DYL72_06240 PF00196 Bacterial regulatory proteins, luxR family DYL72_06245 PF00999 Sodium/hydrogen exchanger family DYL72_06245 PF03471 Transporter associated domain DYL72_06245 PF02080 TrkA-C domain DYL72_06255 PF00474 Sodium:solute symporter family DYL72_06260 PF00072 Response regulator receiver domain DYL72_06260 PF00672 HAMP domain DYL72_06260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYL72_06260 PF01627 Hpt domain DYL72_06260 PF00512 His Kinase A (phospho-acceptor) domain DYL72_06265 PF12832 MFS_1 like family DYL72_06280 PF00501 AMP-binding enzyme DYL72_06280 PF13193 AMP-binding enzyme C-terminal domain DYL72_06280 PF16177 Acetyl-coenzyme A synthetase N-terminus DYL72_06285 PF01220 Dehydroquinase class II DYL72_06290 PF00364 Biotin-requiring enzyme DYL72_06295 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DYL72_06295 PF02785 Biotin carboxylase C-terminal domain DYL72_06295 PF00289 Biotin carboxylase, N-terminal domain DYL72_06305 PF01207 Dihydrouridine synthase (Dus) DYL72_06310 PF02954 Bacterial regulatory protein, Fis family DYL72_06315 PF00672 HAMP domain DYL72_06315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYL72_06315 PF17200 Single Cache domain 2 DYL72_06320 PF13411 MerR HTH family regulatory protein DYL72_06325 PF01808 AICARFT/IMPCHase bienzyme DYL72_06325 PF02142 MGS-like domain DYL72_06330 PF02843 Phosphoribosylglycinamide synthetase, C domain DYL72_06330 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DYL72_06330 PF02844 Phosphoribosylglycinamide synthetase, N domain DYL72_06340 PF00216 Bacterial DNA-binding protein DYL72_06345 PF00571 CBS domain DYL72_06345 PF01595 Cyclin M transmembrane N-terminal domain DYL72_06370 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF DYL72_06375 PF06251 Capsule biosynthesis GfcC DYL72_06380 PF06082 Exopolysaccharide biosynthesis protein YbjH DYL72_06390 PF04222 Protein of unknown function (DUF416) DYL72_06395 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DYL72_06400 PF00924 Mechanosensitive ion channel DYL72_06405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYL72_06405 PF00672 HAMP domain DYL72_06405 PF02743 Cache domain DYL72_06415 PF03050 Transposase IS66 family DYL72_06415 PF13005 zinc-finger binding domain of transposase IS66 DYL72_06415 PF13007 Transposase C of IS166 homeodomain DYL72_06415 PF13817 IS66 C-terminal element DYL72_06425 PF13005 zinc-finger binding domain of transposase IS66 DYL72_06425 PF13007 Transposase C of IS166 homeodomain DYL72_06425 PF13817 IS66 C-terminal element DYL72_06425 PF03050 Transposase IS66 family DYL72_06455 PF02719 Polysaccharide biosynthesis protein DYL72_06460 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DYL72_06470 PF02397 Bacterial sugar transferase DYL72_06485 PF02350 UDP-N-acetylglucosamine 2-epimerase DYL72_06505 PF00977 Histidine biosynthesis protein DYL72_06510 PF00117 Glutamine amidotransferase class-I DYL72_06540 PF00733 Asparagine synthase DYL72_06540 PF13537 Glutamine amidotransferase domain DYL72_06550 PF01757 Acyltransferase family DYL72_06555 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DYL72_06560 PF00132 Bacterial transferase hexapeptide (six repeats) DYL72_06565 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DYL72_06565 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DYL72_06565 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DYL72_06570 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DYL72_06570 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DYL72_06585 PF01370 NAD dependent epimerase/dehydratase family DYL72_06600 PF04932 O-Antigen ligase DYL72_06610 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DYL72_06620 PF04488 Glycosyltransferase sugar-binding region containing DXD motif DYL72_06625 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DYL72_06655 PF01757 Acyltransferase family DYL72_06665 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DYL72_06670 PF00535 Glycosyl transferase family 2 DYL72_06675 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DYL72_06680 PF01467 Cytidylyltransferase-like DYL72_06685 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DYL72_06685 PF06827 Zinc finger found in FPG and IleRS DYL72_06685 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DYL72_06695 PF00471 Ribosomal protein L33 DYL72_06705 PF04002 RadC-like JAB domain DYL72_06710 PF02441 Flavoprotein DYL72_06710 PF04127 DNA / pantothenate metabolism flavoprotein DYL72_06715 PF00440 Bacterial regulatory proteins, tetR family DYL72_06720 PF03279 Bacterial lipid A biosynthesis acyltransferase DYL72_06725 PF03279 Bacterial lipid A biosynthesis acyltransferase DYL72_06735 PF03725 3' exoribonuclease family, domain 2 DYL72_06735 PF01138 3' exoribonuclease family, domain 1 DYL72_06740 PF03755 YicC-like family, N-terminal region DYL72_06740 PF08340 Domain of unknown function (DUF1732) DYL72_06760 PF00675 Insulinase (Peptidase family M16) DYL72_06760 PF05193 Peptidase M16 inactive domain DYL72_06765 PF03350 Uncharacterized protein family, UPF0114 DYL72_06770 PF01032 FecCD transport family DYL72_06775 PF01497 Periplasmic binding protein DYL72_06780 PF00005 ABC transporter DYL72_06785 PF00593 TonB dependent receptor DYL72_06785 PF07715 TonB-dependent Receptor Plug Domain DYL72_06790 PF00005 ABC transporter DYL72_06790 PF00664 ABC transporter transmembrane region DYL72_06795 PF02378 Phosphotransferase system, EIIC DYL72_06795 PF00367 phosphotransferase system, EIIB DYL72_06800 PF01380 SIS domain DYL72_06805 PF01380 SIS domain DYL72_06805 PF01418 Helix-turn-helix domain, rpiR family DYL72_06820 PF00271 Helicase conserved C-terminal domain DYL72_06820 PF00570 HRDC domain DYL72_06820 PF16124 RecQ zinc-binding DYL72_06820 PF00270 DEAD/DEAH box helicase DYL72_06820 PF09382 RQC domain DYL72_06825 PF00892 EamA-like transporter family DYL72_06835 PF01810 LysE type translocator DYL72_06845 PF13361 UvrD-like helicase C-terminal domain DYL72_06845 PF00580 UvrD/REP helicase N-terminal domain DYL72_06850 PF01432 Peptidase family M3 DYL72_06855 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ DYL72_06860 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYL72_06860 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DYL72_06905 PF13007 Transposase C of IS166 homeodomain DYL72_06905 PF03050 Transposase IS66 family DYL72_06905 PF13817 IS66 C-terminal element DYL72_06905 PF13005 zinc-finger binding domain of transposase IS66 DYL72_06940 PF13007 Transposase C of IS166 homeodomain DYL72_06940 PF13817 IS66 C-terminal element DYL72_06940 PF03050 Transposase IS66 family DYL72_06940 PF13005 zinc-finger binding domain of transposase IS66 DYL72_06950 PF01032 FecCD transport family DYL72_06955 PF01497 Periplasmic binding protein DYL72_06960 PF13542 Helix-turn-helix domain of transposase family ISL3 DYL72_06960 PF01610 Transposase DYL72_06960 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DYL72_06965 PF00593 TonB dependent receptor DYL72_06965 PF07715 TonB-dependent Receptor Plug Domain DYL72_06970 PF00005 ABC transporter DYL72_06975 PF00005 ABC transporter DYL72_06975 PF00664 ABC transporter transmembrane region DYL72_06990 PF02899 Phage integrase, N-terminal SAM-like domain DYL72_06990 PF00589 Phage integrase family DYL72_07015 PF00072 Response regulator receiver domain DYL72_07030 PF00528 Binding-protein-dependent transport system inner membrane component DYL72_07030 PF12911 N-terminal TM domain of oligopeptide transport permease C DYL72_07040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DYL72_07045 PF00005 ABC transporter DYL72_07045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DYL72_07075 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DYL72_07080 PF13361 UvrD-like helicase C-terminal domain DYL72_07080 PF00580 UvrD/REP helicase N-terminal domain DYL72_07085 PF00440 Bacterial regulatory proteins, tetR family DYL72_07085 PF08359 YsiA-like protein, C-terminal region DYL72_07090 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DYL72_07095 PF00873 AcrB/AcrD/AcrF family DYL72_07100 PF04380 Membrane fusogenic activity DYL72_07105 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DYL72_07105 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DYL72_07110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_07110 PF03466 LysR substrate binding domain DYL72_07115 PF04055 Radical SAM superfamily DYL72_07115 PF06969 HemN C-terminal domain DYL72_07120 PF10675 Protein of unknown function (DUF2489) DYL72_07125 PF04220 Der GTPase activator (YihI) DYL72_07135 PF00034 Cytochrome c DYL72_07140 PF01926 50S ribosome-binding GTPase DYL72_07145 PF00476 DNA polymerase family A DYL72_07145 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DYL72_07145 PF01367 5'-3' exonuclease, C-terminal SAM fold DYL72_07145 PF01612 3'-5' exonuclease DYL72_07150 PF00490 Delta-aminolevulinic acid dehydratase DYL72_07155 PF01026 TatD related DNase DYL72_07160 PF00902 Sec-independent protein translocase protein (TatC) DYL72_07165 PF02416 mttA/Hcf106 family DYL72_07170 PF02416 mttA/Hcf106 family DYL72_07175 PF03109 ABC1 family DYL72_07180 PF02036 SCP-2 sterol transfer family DYL72_07185 PF01209 ubiE/COQ5 methyltransferase family DYL72_07190 PF02646 RmuC family DYL72_07195 PF00892 EamA-like transporter family DYL72_07200 PF00563 EAL domain DYL72_07200 PF00990 Diguanylate cyclase, GGDEF domain DYL72_07200 PF03707 Bacterial signalling protein N terminal repeat DYL72_07260 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DYL72_07260 PF13542 Helix-turn-helix domain of transposase family ISL3 DYL72_07260 PF01610 Transposase DYL72_07275 PF13817 IS66 C-terminal element DYL72_07275 PF13007 Transposase C of IS166 homeodomain DYL72_07275 PF13005 zinc-finger binding domain of transposase IS66 DYL72_07275 PF03050 Transposase IS66 family DYL72_07295 PF00665 Integrase core domain DYL72_07305 PF13335 Magnesium chelatase, subunit ChlI C-terminal DYL72_07305 PF01078 Magnesium chelatase, subunit ChlI DYL72_07310 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DYL72_07310 PF00205 Thiamine pyrophosphate enzyme, central domain DYL72_07310 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DYL72_07320 PF01063 Amino-transferase class IV DYL72_07325 PF00920 Dehydratase family DYL72_07330 PF00291 Pyridoxal-phosphate dependent enzyme DYL72_07330 PF00585 C-terminal regulatory domain of Threonine dehydratase DYL72_07335 PF08240 Alcohol dehydrogenase GroES-like domain DYL72_07335 PF00107 Zinc-binding dehydrogenase DYL72_07340 PF03466 LysR substrate binding domain DYL72_07340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_07350 PF01206 Sulfurtransferase TusA DYL72_07360 PF01169 Uncharacterized protein family UPF0016 DYL72_07365 PF02091 Glycyl-tRNA synthetase alpha subunit DYL72_07370 PF02092 Glycyl-tRNA synthetase beta subunit DYL72_07370 PF05746 DALR anticodon binding domain DYL72_07380 PF00011 Hsp20/alpha crystallin family DYL72_07395 PF00986 DNA gyrase B subunit, carboxyl terminus DYL72_07395 PF01751 Toprim domain DYL72_07395 PF18053 DNA gyrase B subunit insert domain DYL72_07395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYL72_07395 PF00204 DNA gyrase B DYL72_07400 PF02463 RecF/RecN/SMC N terminal domain DYL72_07405 PF02767 DNA polymerase III beta subunit, central domain DYL72_07405 PF00712 DNA polymerase III beta subunit, N-terminal domain DYL72_07405 PF02768 DNA polymerase III beta subunit, C-terminal domain DYL72_07410 PF00308 Bacterial dnaA protein DYL72_07410 PF08299 Bacterial dnaA protein helix-turn-helix DYL72_07410 PF11638 DnaA N-terminal domain DYL72_07415 PF00497 Bacterial extracellular solute-binding proteins, family 3 DYL72_07420 PF00528 Binding-protein-dependent transport system inner membrane component DYL72_07425 PF00005 ABC transporter DYL72_07430 PF00468 Ribosomal protein L34 DYL72_07435 PF00825 Ribonuclease P DYL72_07440 PF01809 Putative membrane protein insertion efficiency factor DYL72_07445 PF02096 60Kd inner membrane protein DYL72_07445 PF14849 YidC periplasmic domain DYL72_07450 PF01926 50S ribosome-binding GTPase DYL72_07450 PF12631 MnmE helical domain DYL72_07450 PF10396 GTP-binding protein TrmE N-terminus DYL72_07455 PF00258 Flavodoxin DYL72_07460 PF13932 GidA associated domain DYL72_07460 PF01134 Glucose inhibited division protein A DYL72_07465 PF02527 rRNA small subunit methyltransferase G DYL72_07470 PF13614 AAA domain DYL72_07475 PF17762 HTH domain found in ParB protein DYL72_07475 PF02195 ParB-like nuclease domain DYL72_07480 PF03899 ATP synthase I chain DYL72_07485 PF00119 ATP synthase A chain DYL72_07490 PF00137 ATP synthase subunit C DYL72_07495 PF00430 ATP synthase B/B' CF(0) DYL72_07500 PF00213 ATP synthase delta (OSCP) subunit DYL72_07505 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DYL72_07505 PF00306 ATP synthase alpha/beta chain, C terminal domain DYL72_07505 PF02874 ATP synthase alpha/beta family, beta-barrel domain DYL72_07510 PF00231 ATP synthase DYL72_07515 PF02874 ATP synthase alpha/beta family, beta-barrel domain DYL72_07515 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DYL72_07520 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DYL72_07520 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DYL72_07525 PF14602 Hexapeptide repeat of succinyl-transferase DYL72_07525 PF12804 MobA-like NTP transferase domain DYL72_07525 PF00132 Bacterial transferase hexapeptide (six repeats) DYL72_07530 PF07690 Major Facilitator Superfamily DYL72_07535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_07535 PF03466 LysR substrate binding domain DYL72_07540 PF02803 Thiolase, C-terminal domain DYL72_07540 PF00108 Thiolase, N-terminal domain DYL72_07545 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DYL72_07545 PF00378 Enoyl-CoA hydratase/isomerase DYL72_07545 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DYL72_07550 PF01205 Uncharacterized protein family UPF0029 DYL72_07550 PF09186 Domain of unknown function (DUF1949) DYL72_07555 PF02386 Cation transport protein DYL72_07560 PF12724 Flavodoxin domain DYL72_07610 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DYL72_07615 PF13667 ThiC-associated domain DYL72_07615 PF01964 Radical SAM ThiC family DYL72_07620 PF02581 Thiamine monophosphate synthase DYL72_07625 PF00899 ThiF family DYL72_07630 PF02597 ThiS family DYL72_07635 PF05690 Thiazole biosynthesis protein ThiG DYL72_07640 PF04055 Radical SAM superfamily DYL72_07640 PF06968 Biotin and Thiamin Synthesis associated domain DYL72_07645 PF00557 Metallopeptidase family M24 DYL72_07645 PF01321 Creatinase/Prolidase N-terminal domain DYL72_07645 PF00557 Metallopeptidase family M24 DYL72_07645 PF01321 Creatinase/Prolidase N-terminal domain DYL72_07650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_07650 PF03466 LysR substrate binding domain DYL72_07655 PF07690 Major Facilitator Superfamily DYL72_07665 PF01037 Lrp/AsnC ligand binding domain DYL72_07670 PF04445 Putative SAM-dependent methyltransferase DYL72_07680 PF00892 EamA-like transporter family DYL72_07685 PF00582 Universal stress protein family DYL72_07690 PF00210 Ferritin-like domain DYL72_07695 PF10625 Universal stress protein B (UspB) DYL72_07740 PF01048 Phosphorylase superfamily DYL72_07770 PF01323 DSBA-like thioredoxin domain DYL72_07775 PF01636 Phosphotransferase enzyme family DYL72_07780 PF13006 Insertion element 4 transposase N-terminal DYL72_07780 PF01609 Transposase DDE domain DYL72_07785 PF12801 4Fe-4S binding domain DYL72_07785 PF13746 4Fe-4S dicluster domain DYL72_07785 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase DYL72_07795 PF06288 Protein of unknown function (DUF1040) DYL72_07805 PF03006 Haemolysin-III related DYL72_07815 PF02386 Cation transport protein DYL72_07820 PF02254 TrkA-N domain DYL72_07820 PF02080 TrkA-C domain DYL72_07825 PF01189 16S rRNA methyltransferase RsmB/F DYL72_07825 PF01029 NusB family DYL72_07830 PF02911 Formyl transferase, C-terminal domain DYL72_07830 PF00551 Formyl transferase DYL72_07835 PF01327 Polypeptide deformylase DYL72_07840 PF01476 LysM domain DYL72_07845 PF02481 DNA recombination-mediator protein A DYL72_07845 PF17782 DprA winged helix domain DYL72_07850 PF04361 Protein of unknown function (DUF494) DYL72_07855 PF01396 Topoisomerase DNA binding C4 zinc finger DYL72_07860 PF02222 ATP-grasp domain DYL72_07860 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DYL72_07865 PF00731 AIR carboxylase DYL72_07870 PF01300 Telomere recombination DYL72_07875 PF01218 Coproporphyrinogen III oxidase DYL72_07880 PF01488 Shikimate / quinate 5-dehydrogenase DYL72_07880 PF08501 Shikimate dehydrogenase substrate binding domain DYL72_07880 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DYL72_07885 PF07369 Protein of unknown function (DUF1488) DYL72_07890 PF00132 Bacterial transferase hexapeptide (six repeats) DYL72_07925 PF07219 HemY protein N-terminus DYL72_07930 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase DYL72_07935 PF02602 Uroporphyrinogen-III synthase HemD DYL72_07940 PF03900 Porphobilinogen deaminase, C-terminal domain DYL72_07940 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DYL72_07950 PF01295 Adenylate cyclase, class-I DYL72_07950 PF12633 Adenylate cyclase NT domain DYL72_07955 PF01491 Frataxin-like domain DYL72_07965 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DYL72_07965 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DYL72_07970 PF01678 Diaminopimelate epimerase DYL72_07980 PF02899 Phage integrase, N-terminal SAM-like domain DYL72_07980 PF00589 Phage integrase family DYL72_07985 PF13419 Haloacid dehalogenase-like hydrolase DYL72_08005 PF12146 Serine aminopeptidase, S33 DYL72_08010 PF01810 LysE type translocator DYL72_08015 PF08668 HDOD domain DYL72_08015 PF00563 EAL domain DYL72_08020 PF00210 Ferritin-like domain DYL72_08050 PF01914 MarC family integral membrane protein DYL72_08065 PF13005 zinc-finger binding domain of transposase IS66 DYL72_08065 PF13817 IS66 C-terminal element DYL72_08065 PF13007 Transposase C of IS166 homeodomain DYL72_08065 PF03050 Transposase IS66 family DYL72_08080 PF05958 tRNA (Uracil-5-)-methyltransferase DYL72_08120 PF13005 zinc-finger binding domain of transposase IS66 DYL72_08120 PF13817 IS66 C-terminal element DYL72_08120 PF13007 Transposase C of IS166 homeodomain DYL72_08120 PF03050 Transposase IS66 family DYL72_08150 PF04002 RadC-like JAB domain DYL72_08210 PF13005 zinc-finger binding domain of transposase IS66 DYL72_08210 PF13007 Transposase C of IS166 homeodomain DYL72_08210 PF13817 IS66 C-terminal element DYL72_08210 PF03050 Transposase IS66 family DYL72_08215 PF00075 RNase H DYL72_08250 PF13007 Transposase C of IS166 homeodomain DYL72_08250 PF03050 Transposase IS66 family DYL72_08250 PF13817 IS66 C-terminal element DYL72_08250 PF13005 zinc-finger binding domain of transposase IS66 DYL72_08275 PF02929 Beta galactosidase small chain DYL72_08275 PF02837 Glycosyl hydrolases family 2, sugar binding domain DYL72_08275 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DYL72_08275 PF00703 Glycosyl hydrolases family 2 DYL72_08275 PF16353 Domain of unknown function(DUF4981) DYL72_08285 PF07226 Protein of unknown function (DUF1422) DYL72_08290 PF00440 Bacterial regulatory proteins, tetR family DYL72_08300 PF01554 MatE DYL72_08310 PF01726 LexA DNA binding domain DYL72_08310 PF00717 Peptidase S24-like DYL72_08315 PF01553 Acyltransferase DYL72_08320 PF01040 UbiA prenyltransferase family DYL72_08325 PF04345 Chorismate lyase DYL72_08330 PF03748 Flagellar basal body-associated protein FliL DYL72_08335 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease DYL72_08335 PF01694 Rhomboid family DYL72_08340 PF00581 Rhodanese-like domain DYL72_08345 PF00140 Sigma-70 factor, region 1.2 DYL72_08345 PF04542 Sigma-70 region 2 DYL72_08345 PF04545 Sigma-70, region 4 DYL72_08350 PF18075 FtsX extracellular domain DYL72_08355 PF00005 ABC transporter DYL72_08360 PF02881 SRP54-type protein, helical bundle domain DYL72_08360 PF00448 SRP54-type protein, GTPase domain DYL72_08385 PF13358 DDE superfamily endonuclease DYL72_08420 PF13817 IS66 C-terminal element DYL72_08420 PF13007 Transposase C of IS166 homeodomain DYL72_08420 PF03050 Transposase IS66 family DYL72_08420 PF13005 zinc-finger binding domain of transposase IS66 DYL72_08430 PF13817 IS66 C-terminal element DYL72_08430 PF13007 Transposase C of IS166 homeodomain DYL72_08430 PF03050 Transposase IS66 family DYL72_08430 PF13005 zinc-finger binding domain of transposase IS66 DYL72_08445 PF13007 Transposase C of IS166 homeodomain DYL72_08445 PF03050 Transposase IS66 family DYL72_08445 PF13005 zinc-finger binding domain of transposase IS66 DYL72_08445 PF13817 IS66 C-terminal element DYL72_08455 PF13361 UvrD-like helicase C-terminal domain DYL72_08455 PF00580 UvrD/REP helicase N-terminal domain DYL72_08475 PF00593 TonB dependent receptor DYL72_08475 PF07715 TonB-dependent Receptor Plug Domain DYL72_08485 PF01177 Asp/Glu/Hydantoin racemase DYL72_08525 PF00962 Adenosine/AMP deaminase DYL72_08530 PF03707 Bacterial signalling protein N terminal repeat DYL72_08530 PF00990 Diguanylate cyclase, GGDEF domain DYL72_08530 PF00563 EAL domain DYL72_08530 PF13188 PAS domain DYL72_08535 PF02954 Bacterial regulatory protein, Fis family DYL72_08535 PF00072 Response regulator receiver domain DYL72_08535 PF00158 Sigma-54 interaction domain DYL72_08540 PF00512 His Kinase A (phospho-acceptor) domain DYL72_08540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYL72_08540 PF00989 PAS fold DYL72_08550 PF03951 Glutamine synthetase, beta-Grasp domain DYL72_08550 PF00120 Glutamine synthetase, catalytic domain DYL72_08565 PF02580 D-Tyr-tRNA(Tyr) deacylase DYL72_08570 PF00583 Acetyltransferase (GNAT) family DYL72_08570 PF09500 Putative thioesterase (yiiD_Cterm) DYL72_08580 PF01293 Phosphoenolpyruvate carboxykinase DYL72_08585 PF01430 Hsp33 protein DYL72_08590 PF01479 S4 domain DYL72_08595 PF11356 Type II secretion system protein C DYL72_08605 PF00437 Type II/IV secretion system protein DYL72_08610 PF00482 Type II secretion system (T2SS), protein F DYL72_08615 PF08334 Type II secretion system (T2SS), protein G DYL72_08615 PF07963 Prokaryotic N-terminal methylation motif DYL72_08620 PF12019 Type II transport protein GspH DYL72_08625 PF02501 Type II secretion system (T2SS), protein I DYL72_08625 PF07963 Prokaryotic N-terminal methylation motif DYL72_08630 PF11612 Type II secretion system (T2SS), protein J DYL72_08630 PF07963 Prokaryotic N-terminal methylation motif DYL72_08635 PF03934 Type II secretion system (T2SS), protein K DYL72_08640 PF12693 GspL periplasmic domain DYL72_08640 PF05134 Type II secretion system (T2SS), protein L DYL72_08645 PF04612 Type II secretion system (T2SS), protein M DYL72_08650 PF01203 Type II secretion system (T2SS), protein N DYL72_08655 PF00459 Inositol monophosphatase family DYL72_08660 PF00293 NUDIX domain DYL72_08665 PF01521 Iron-sulphur cluster biosynthesis DYL72_08665 PF01106 NifU-like domain DYL72_08670 PF00156 Phosphoribosyl transferase domain DYL72_08675 PF00561 alpha/beta hydrolase fold DYL72_08685 PF00575 S1 RNA binding domain DYL72_08685 PF16921 Tex protein YqgF-like domain DYL72_08685 PF09371 Tex-like protein N-terminal domain DYL72_08685 PF17674 HHH domain DYL72_08690 PF01272 Transcription elongation factor, GreA/GreB, C-term DYL72_08690 PF03449 Transcription elongation factor, N-terminal DYL72_08700 PF06942 GlpM protein DYL72_08710 PF03466 LysR substrate binding domain DYL72_08710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_08720 PF00881 Nitroreductase family DYL72_08730 PF00486 Transcriptional regulatory protein, C terminal DYL72_08730 PF00072 Response regulator receiver domain DYL72_08735 PF00512 His Kinase A (phospho-acceptor) domain DYL72_08735 PF00672 HAMP domain DYL72_08735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYL72_08740 PF00860 Permease family DYL72_08745 PF00271 Helicase conserved C-terminal domain DYL72_08745 PF17191 RecG wedge domain DYL72_08745 PF00270 DEAD/DEAH box helicase DYL72_08750 PF02824 TGS domain DYL72_08750 PF13291 ACT domain DYL72_08750 PF04607 Region found in RelA / SpoT proteins DYL72_08755 PF01192 RNA polymerase Rpb6 DYL72_08760 PF00625 Guanylate kinase DYL72_08765 PF02592 Putative vitamin uptake transporter DYL72_08770 PF02541 Ppx/GppA phosphatase family DYL72_08775 PF00270 DEAD/DEAH box helicase DYL72_08775 PF00271 Helicase conserved C-terminal domain DYL72_08780 PF00085 Thioredoxin DYL72_08785 PF07497 Rho termination factor, RNA-binding domain DYL72_08785 PF07498 Rho termination factor, N-terminal domain DYL72_08785 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DYL72_08795 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DYL72_08800 PF00111 2Fe-2S iron-sulfur cluster binding domain DYL72_08800 PF00970 Oxidoreductase FAD-binding domain DYL72_08800 PF00175 Oxidoreductase NAD-binding domain DYL72_08805 PF00175 Oxidoreductase NAD-binding domain DYL72_08880 PF13091 PLD-like domain DYL72_08890 PF01565 FAD binding domain DYL72_08890 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DYL72_08895 PF03099 Biotin/lipoate A/B protein ligase family DYL72_08895 PF02237 Biotin protein ligase C terminal domain DYL72_08895 PF08279 HTH domain DYL72_08900 PF00485 Phosphoribulokinase / Uridine kinase family DYL72_08925 PF03143 Elongation factor Tu C-terminal domain DYL72_08925 PF03144 Elongation factor Tu domain 2 DYL72_08925 PF00009 Elongation factor Tu GTP binding domain DYL72_08930 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DYL72_08935 PF00467 KOW motif DYL72_08935 PF02357 Transcription termination factor nusG DYL72_08940 PF00298 Ribosomal protein L11, RNA binding domain DYL72_08940 PF03946 Ribosomal protein L11, N-terminal domain DYL72_08945 PF00687 Ribosomal protein L1p/L10e family DYL72_08950 PF00466 Ribosomal protein L10 DYL72_08955 PF16320 Ribosomal protein L7/L12 dimerisation domain DYL72_08955 PF00542 Ribosomal protein L7/L12 C-terminal domain DYL72_08960 PF04560 RNA polymerase Rpb2, domain 7 DYL72_08960 PF04565 RNA polymerase Rpb2, domain 3 DYL72_08960 PF04563 RNA polymerase beta subunit DYL72_08960 PF04561 RNA polymerase Rpb2, domain 2 DYL72_08960 PF00562 RNA polymerase Rpb2, domain 6 DYL72_08960 PF10385 RNA polymerase beta subunit external 1 domain DYL72_08965 PF04998 RNA polymerase Rpb1, domain 5 DYL72_08965 PF00623 RNA polymerase Rpb1, domain 2 DYL72_08965 PF04983 RNA polymerase Rpb1, domain 3 DYL72_08965 PF05000 RNA polymerase Rpb1, domain 4 DYL72_08965 PF04997 RNA polymerase Rpb1, domain 1 DYL72_08970 PF13006 Insertion element 4 transposase N-terminal DYL72_08970 PF01609 Transposase DDE domain DYL72_08975 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ DYL72_08980 PF00293 NUDIX domain DYL72_08980 PF09297 NADH pyrophosphatase zinc ribbon domain DYL72_08985 PF01208 Uroporphyrinogen decarboxylase (URO-D) DYL72_08990 PF08360 QacR-like protein, C-terminal region DYL72_08990 PF00440 Bacterial regulatory proteins, tetR family DYL72_09000 PF01551 Peptidase family M23 DYL72_09005 PF01676 Metalloenzyme superfamily DYL72_09005 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DYL72_09015 PF02743 Cache domain DYL72_09015 PF00672 HAMP domain DYL72_09015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYL72_09020 PF03600 Citrate transporter DYL72_09020 PF02080 TrkA-C domain DYL72_09025 PF02666 Phosphatidylserine decarboxylase DYL72_09030 PF03193 RsgA GTPase DYL72_09035 PF00929 Exonuclease DYL72_09090 PF08331 Domain of unknown function (DUF1730) DYL72_09095 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DYL72_09100 PF01520 N-acetylmuramoyl-L-alanine amidase DYL72_09105 PF08676 MutL C terminal dimerisation domain DYL72_09105 PF01119 DNA mismatch repair protein, C-terminal domain DYL72_09115 PF17209 Hfq protein DYL72_09120 PF16360 GTP-binding GTPase Middle Region DYL72_09120 PF13167 GTP-binding GTPase N-terminal DYL72_09120 PF01926 50S ribosome-binding GTPase DYL72_09125 PF01145 SPFH domain / Band 7 family DYL72_09125 PF12221 Bacterial membrane protein N terminal DYL72_09130 PF01145 SPFH domain / Band 7 family DYL72_09135 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) DYL72_09140 PF04102 SlyX DYL72_09150 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DYL72_09150 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DYL72_09155 PF08348 YheO-like PAS domain DYL72_09155 PF13309 HTH domain DYL72_09160 PF02635 DsrE/DsrF-like family DYL72_09165 PF02635 DsrE/DsrF-like family DYL72_09170 PF04077 DsrH like protein DYL72_09175 PF00164 Ribosomal protein S12/S23 DYL72_09180 PF00177 Ribosomal protein S7p/S5e DYL72_09185 PF00679 Elongation factor G C-terminus DYL72_09185 PF14492 Elongation Factor G, domain II DYL72_09185 PF03764 Elongation factor G, domain IV DYL72_09185 PF00009 Elongation factor Tu GTP binding domain DYL72_09185 PF03144 Elongation factor Tu domain 2 DYL72_09190 PF00009 Elongation factor Tu GTP binding domain DYL72_09190 PF03143 Elongation factor Tu C-terminal domain DYL72_09190 PF03144 Elongation factor Tu domain 2 DYL72_09195 PF01250 Ribosomal protein S6 DYL72_09200 PF00436 Single-strand binding protein family DYL72_09205 PF01084 Ribosomal protein S18 DYL72_09210 PF03948 Ribosomal protein L9, C-terminal domain DYL72_09210 PF01281 Ribosomal protein L9, N-terminal domain DYL72_09220 PF00772 DnaB-like helicase N terminal domain DYL72_09220 PF03796 DnaB-like helicase C terminal domain DYL72_09225 PF01168 Alanine racemase, N-terminal domain DYL72_09225 PF00842 Alanine racemase, C-terminal domain DYL72_09230 PF00342 Phosphoglucose isomerase DYL72_09240 PF01475 Ferric uptake regulator family DYL72_09245 PF01207 Dihydrouridine synthase (Dus) DYL72_09265 PF00258 Flavodoxin DYL72_09265 PF00667 FAD binding domain DYL72_09265 PF00175 Oxidoreductase NAD-binding domain DYL72_09270 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DYL72_09270 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DYL72_09275 PF01507 Phosphoadenosine phosphosulfate reductase family DYL72_09355 PF00999 Sodium/hydrogen exchanger family DYL72_09360 PF02310 B12 binding domain DYL72_09360 PF02607 B12 binding domain DYL72_09360 PF02965 Vitamin B12 dependent methionine synthase, activation domain DYL72_09360 PF00809 Pterin binding enzyme DYL72_09360 PF02574 Homocysteine S-methyltransferase DYL72_09365 PF00696 Amino acid kinase family DYL72_09365 PF01842 ACT domain DYL72_09370 PF00266 Aminotransferase class-V DYL72_09385 PF01769 Divalent cation transporter DYL72_09385 PF03448 MgtE intracellular N domain DYL72_09385 PF00571 CBS domain DYL72_09390 PF13005 zinc-finger binding domain of transposase IS66 DYL72_09390 PF03050 Transposase IS66 family DYL72_09390 PF13817 IS66 C-terminal element DYL72_09390 PF13007 Transposase C of IS166 homeodomain DYL72_09410 PF00005 ABC transporter DYL72_09410 PF17760 UvrA interaction domain DYL72_09410 PF17755 UvrA DNA-binding domain DYL72_09415 PF00483 Nucleotidyl transferase DYL72_09420 PF00196 Bacterial regulatory proteins, luxR family DYL72_09425 PF00436 Single-strand binding protein family DYL72_09430 PF00563 EAL domain DYL72_09430 PF00990 Diguanylate cyclase, GGDEF domain DYL72_09430 PF17157 Gammaproteobacterial periplasmic sensor domain DYL72_09450 PF00263 Bacterial type II and III secretion system protein DYL72_09450 PF03958 Bacterial type II/III secretion system short domain DYL72_09455 PF01471 Putative peptidoglycan binding domain DYL72_09455 PF13401 AAA domain DYL72_09465 PF00437 Type II/IV secretion system protein DYL72_09465 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DYL72_09470 PF00482 Type II secretion system (T2SS), protein F DYL72_09480 PF07963 Prokaryotic N-terminal methylation motif DYL72_09480 PF00114 Pilin (bacterial filament) DYL72_09520 PF04085 rod shape-determining protein MreC DYL72_09525 PF04093 rod shape-determining protein MreD DYL72_09530 PF02545 Maf-like protein DYL72_09535 PF10150 Ribonuclease E/G family DYL72_09535 PF00575 S1 RNA binding domain DYL72_09540 PF13502 AsmA-like C-terminal region DYL72_09540 PF13116 Protein of unknown function DYL72_09545 PF00795 Carbon-nitrogen hydrolase DYL72_09550 PF01523 Putative modulator of DNA gyrase DYL72_09560 PF06877 Regulator of ribonuclease activity B DYL72_09575 PF00582 Universal stress protein family DYL72_09585 PF16868 NMT1-like family DYL72_09600 PF00056 lactate/malate dehydrogenase, NAD binding domain DYL72_09600 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DYL72_09605 PF13520 Amino acid permease DYL72_09610 PF01609 Transposase DDE domain DYL72_09610 PF13006 Insertion element 4 transposase N-terminal DYL72_09615 PF00348 Polyprenyl synthetase DYL72_09630 PF01016 Ribosomal L27 protein DYL72_09635 PF01018 GTP1/OBG DYL72_09635 PF01926 50S ribosome-binding GTPase DYL72_09640 PF06738 Putative threonine/serine exporter DYL72_09645 PF12821 Threonine/Serine exporter, ThrE DYL72_09650 PF00186 Dihydrofolate reductase DYL72_09655 PF00149 Calcineurin-like phosphoesterase DYL72_09660 PF04379 ApaG domain DYL72_09665 PF00398 Ribosomal RNA adenine dimethylase DYL72_09670 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DYL72_09675 PF09312 SurA N-terminal domain DYL72_09680 PF03968 OstA-like protein DYL72_09680 PF04453 LPS transport system D DYL72_09685 PF05099 Tellurite resistance protein TerB DYL72_09685 PF00226 DnaJ domain DYL72_09735 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain DYL72_09735 PF01464 Transglycosylase SLT domain DYL72_09740 PF04362 Bacterial Fe(2+) trafficking DYL72_09745 PF00730 HhH-GPD superfamily base excision DNA repair protein DYL72_09745 PF00633 Helix-hairpin-helix motif DYL72_09745 PF14815 NUDIX domain DYL72_09750 PF02390 Putative methyltransferase DYL72_09755 PF04960 Glutaminase DYL72_09760 PF06969 HemN C-terminal domain DYL72_09760 PF04055 Radical SAM superfamily DYL72_09765 PF01725 Ham1 family DYL72_09785 PF03807 NADP oxidoreductase coenzyme F420-dependent DYL72_09785 PF14748 Pyrroline-5-carboxylate reductase dimerisation DYL72_09790 PF01168 Alanine racemase, N-terminal domain DYL72_09795 PF00437 Type II/IV secretion system protein DYL72_09800 PF00437 Type II/IV secretion system protein DYL72_09805 PF03652 Holliday junction resolvase DYL72_09810 PF02622 Uncharacterized ACR, COG1678 DYL72_09815 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain DYL72_09815 PF02951 Prokaryotic glutathione synthetase, N-terminal domain DYL72_09820 PF04452 RNA methyltransferase DYL72_09825 PF04231 Endonuclease I DYL72_09830 PF17283 SprT-like zinc ribbon domain DYL72_09830 PF10263 SprT-like family DYL72_09835 PF00438 S-adenosylmethionine synthetase, N-terminal domain DYL72_09835 PF02772 S-adenosylmethionine synthetase, central domain DYL72_09835 PF02773 S-adenosylmethionine synthetase, C-terminal domain DYL72_09840 PF02779 Transketolase, pyrimidine binding domain DYL72_09840 PF02780 Transketolase, C-terminal domain DYL72_09840 PF00456 Transketolase, thiamine diphosphate binding domain DYL72_09845 PF03466 LysR substrate binding domain DYL72_09845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_09850 PF00593 TonB dependent receptor DYL72_09850 PF07715 TonB-dependent Receptor Plug Domain DYL72_09855 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DYL72_09855 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DYL72_09860 PF00162 Phosphoglycerate kinase DYL72_09865 PF01116 Fructose-bisphosphate aldolase class-II DYL72_09870 PF05552 Conserved TM helix DYL72_09870 PF00924 Mechanosensitive ion channel DYL72_09875 PF01810 LysE type translocator DYL72_09880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_09880 PF03466 LysR substrate binding domain DYL72_09890 PF17158 Membrane-associated sensor, integral membrane domain DYL72_09890 PF00990 Diguanylate cyclase, GGDEF domain DYL72_09895 PF13006 Insertion element 4 transposase N-terminal DYL72_09895 PF01609 Transposase DDE domain DYL72_09900 PF00224 Pyruvate kinase, barrel domain DYL72_09900 PF02887 Pyruvate kinase, alpha/beta domain DYL72_09905 PF08220 DeoR-like helix-turn-helix domain DYL72_09905 PF00455 DeoR C terminal sensor domain DYL72_09910 PF01380 SIS domain DYL72_09920 PF13274 Protein of unknown function (DUF4065) DYL72_09930 PF06527 TniQ DYL72_09930 PF15978 Tn7-like transposition protein D DYL72_09950 PF02384 N-6 DNA Methylase DYL72_09950 PF12161 HsdM N-terminal domain DYL72_09960 PF08463 EcoEI R protein C-terminal DYL72_09960 PF04851 Type III restriction enzyme, res subunit DYL72_09960 PF00271 Helicase conserved C-terminal domain DYL72_09960 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) DYL72_09965 PF11426 Tn7 transposition regulator TnsC DYL72_09965 PF13401 AAA domain DYL72_09970 PF00665 Integrase core domain DYL72_09980 PF13358 DDE superfamily endonuclease DYL72_09990 PF03466 LysR substrate binding domain DYL72_09990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_09995 PF17848 Acetyl-coA carboxylase zinc finger domain DYL72_09995 PF01039 Carboxyl transferase domain DYL72_10005 PF00472 RF-1 domain DYL72_10010 PF05638 Type VI secretion system effector, Hcp DYL72_10015 PF04717 Type VI secretion system, phage-baseplate injector DYL72_10015 PF16671 Actin cross-linking domain DYL72_10060 PF04542 Sigma-70 region 2 DYL72_10060 PF04539 Sigma-70 region 3 DYL72_10060 PF04545 Sigma-70, region 4 DYL72_10060 PF04546 Sigma-70, non-essential region DYL72_10060 PF00140 Sigma-70 factor, region 1.2 DYL72_10060 PF03979 Sigma-70 factor, region 1.1 DYL72_10065 PF08278 DNA primase DnaG DnaB-binding DYL72_10065 PF08275 DNA primase catalytic core, N-terminal domain DYL72_10065 PF01807 CHC2 zinc finger DYL72_10065 PF10410 DnaB-helicase binding domain of primase DYL72_10070 PF09424 Yqey-like protein DYL72_10090 PF02660 Glycerol-3-phosphate acyltransferase DYL72_10095 PF02152 Dihydroneopterin aldolase DYL72_10100 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DYL72_10105 PF02673 Bacitracin resistance protein BacA DYL72_10110 PF04977 Septum formation initiator DYL72_10115 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DYL72_10120 PF02542 YgbB family DYL72_10125 PF01142 tRNA pseudouridine synthase D (TruD) DYL72_10130 PF01975 Survival protein SurE DYL72_10140 PF01476 LysM domain DYL72_10140 PF01551 Peptidase family M23 DYL72_10145 PF00140 Sigma-70 factor, region 1.2 DYL72_10145 PF04542 Sigma-70 region 2 DYL72_10145 PF04539 Sigma-70 region 3 DYL72_10145 PF04545 Sigma-70, region 4 DYL72_10150 PF05190 MutS family domain IV DYL72_10150 PF01624 MutS domain I DYL72_10150 PF00488 MutS domain V DYL72_10150 PF05188 MutS domain II DYL72_10150 PF05192 MutS domain III DYL72_10155 PF00291 Pyridoxal-phosphate dependent enzyme DYL72_10165 PF00528 Binding-protein-dependent transport system inner membrane component DYL72_10170 PF00528 Binding-protein-dependent transport system inner membrane component DYL72_10175 PF00005 ABC transporter DYL72_10175 PF12857 TOBE-like domain DYL72_10180 PF02464 Competence-damaged protein DYL72_10185 PF00154 recA bacterial DNA recombination protein DYL72_10190 PF02631 RecX family DYL72_10195 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DYL72_10195 PF01411 tRNA synthetases class II (A) DYL72_10195 PF02272 DHHA1 domain DYL72_10200 PF13840 ACT domain DYL72_10200 PF01842 ACT domain DYL72_10200 PF00696 Amino acid kinase family DYL72_10250 PF04277 Oxaloacetate decarboxylase, gamma chain DYL72_10255 PF02436 Conserved carboxylase domain DYL72_10255 PF00364 Biotin-requiring enzyme DYL72_10255 PF00682 HMGL-like DYL72_10260 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit DYL72_10265 PF00107 Zinc-binding dehydrogenase DYL72_10265 PF08240 Alcohol dehydrogenase GroES-like domain DYL72_10270 PF09335 SNARE associated Golgi protein DYL72_10275 PF00675 Insulinase (Peptidase family M16) DYL72_10275 PF05193 Peptidase M16 inactive domain DYL72_10280 PF04262 Glutamate-cysteine ligase DYL72_10290 PF03471 Transporter associated domain DYL72_10290 PF01595 Cyclin M transmembrane N-terminal domain DYL72_10290 PF00571 CBS domain DYL72_10295 PF01578 Cytochrome C assembly protein DYL72_10300 PF02978 Signal peptide binding domain DYL72_10300 PF02881 SRP54-type protein, helical bundle domain DYL72_10300 PF00448 SRP54-type protein, GTPase domain DYL72_10315 PF01746 tRNA (Guanine-1)-methyltransferase DYL72_10320 PF01245 Ribosomal protein L19 DYL72_10325 PF03884 DNA gyrase inhibitor YacG DYL72_10330 PF07072 Cell division protein DYL72_10335 PF01121 Dephospho-CoA kinase DYL72_10340 PF06750 Bacterial Peptidase A24 N-terminal domain DYL72_10340 PF01478 Type IV leader peptidase family DYL72_10345 PF00482 Type II secretion system (T2SS), protein F DYL72_10350 PF00437 Type II/IV secretion system protein DYL72_10350 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DYL72_10355 PF00114 Pilin (bacterial filament) DYL72_10355 PF07963 Prokaryotic N-terminal methylation motif DYL72_10360 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DYL72_10360 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DYL72_10365 PF01510 N-acetylmuramoyl-L-alanine amidase DYL72_10370 PF00258 Flavodoxin DYL72_10375 PF00589 Phage integrase family DYL72_10375 PF02899 Phage integrase, N-terminal SAM-like domain DYL72_10380 PF10411 Disulfide bond isomerase protein N-terminus DYL72_10380 PF13098 Thioredoxin-like domain DYL72_10385 PF02272 DHHA1 domain DYL72_10385 PF01368 DHH family DYL72_10385 PF17768 RecJ OB domain DYL72_10390 PF00392 Bacterial regulatory proteins, gntR family DYL72_10390 PF07729 FCD domain DYL72_10395 PF17831 Pyruvate dehydrogenase E1 component middle domain DYL72_10395 PF00456 Transketolase, thiamine diphosphate binding domain DYL72_10400 PF02817 e3 binding domain DYL72_10400 PF00364 Biotin-requiring enzyme DYL72_10400 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DYL72_10405 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYL72_10405 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DYL72_10410 PF00440 Bacterial regulatory proteins, tetR family DYL72_10415 PF00156 Phosphoribosyl transferase domain DYL72_10420 PF00484 Carbonic anhydrase DYL72_10425 PF00916 Sulfate permease family DYL72_10425 PF01740 STAS domain DYL72_10430 PF00005 ABC transporter DYL72_10475 PF01610 Transposase DYL72_10475 PF13542 Helix-turn-helix domain of transposase family ISL3 DYL72_10475 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DYL72_10485 PF02899 Phage integrase, N-terminal SAM-like domain DYL72_10485 PF00589 Phage integrase family DYL72_10505 PF02569 Pantoate-beta-alanine ligase DYL72_10510 PF02548 Ketopantoate hydroxymethyltransferase DYL72_10515 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DYL72_10520 PF12626 Polymerase A arginine-rich C-terminus DYL72_10520 PF12627 Probable RNA and SrmB- binding site of polymerase A DYL72_10520 PF01743 Poly A polymerase head domain DYL72_10525 PF00749 tRNA synthetases class I (E and Q), catalytic domain DYL72_10530 PF01258 Prokaryotic dksA/traR C4-type zinc finger DYL72_10535 PF03749 Sugar fermentation stimulation protein RE domain DYL72_10535 PF17746 SfsA N-terminal OB domain DYL72_10540 PF00271 Helicase conserved C-terminal domain DYL72_10540 PF04408 Helicase associated domain (HA2) DYL72_10540 PF08482 ATP-dependent helicase C-terminal DYL72_10540 PF00270 DEAD/DEAH box helicase DYL72_10545 PF00905 Penicillin binding protein transpeptidase domain DYL72_10545 PF14814 Bifunctional transglycosylase second domain DYL72_10545 PF00912 Transglycosylase DYL72_10550 PF01734 Patatin-like phospholipase DYL72_10555 PF00330 Aconitase family (aconitate hydratase) DYL72_10555 PF11791 Aconitate B N-terminal domain DYL72_10555 PF06434 Aconitate hydratase 2 N-terminus DYL72_10560 PF02595 Glycerate kinase family DYL72_10565 PF02447 GntP family permease DYL72_10570 PF05651 Putative sugar diacid recognition DYL72_10570 PF17853 GGDEF-like domain DYL72_10570 PF13556 PucR C-terminal helix-turn-helix domain DYL72_10575 PF06062 Uncharacterised protein family (UPF0231) DYL72_10580 PF00543 Nitrogen regulatory protein P-II DYL72_10585 PF00909 Ammonium Transporter Family DYL72_10590 PF13416 Bacterial extracellular solute-binding protein DYL72_10600 PF00005 ABC transporter DYL72_10600 PF08402 TOBE domain DYL72_10605 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DYL72_10605 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DYL72_10605 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DYL72_10610 PF06165 Glycosyltransferase family 36 DYL72_10610 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain DYL72_10615 PF00728 Glycosyl hydrolase family 20, catalytic domain DYL72_10615 PF02838 Glycosyl hydrolase family 20, domain 2 DYL72_10620 PF01869 BadF/BadG/BcrA/BcrD ATPase family DYL72_10630 PF00005 ABC transporter DYL72_10630 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DYL72_10635 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DYL72_10635 PF00005 ABC transporter DYL72_10640 PF00528 Binding-protein-dependent transport system inner membrane component DYL72_10640 PF12911 N-terminal TM domain of oligopeptide transport permease C DYL72_10645 PF00528 Binding-protein-dependent transport system inner membrane component DYL72_10650 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DYL72_10655 PF00512 His Kinase A (phospho-acceptor) domain DYL72_10655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYL72_10655 PF09308 LuxQ, periplasmic DYL72_10655 PF00072 Response regulator receiver domain DYL72_10660 PF05175 Methyltransferase small domain DYL72_10660 PF08468 Methyltransferase small domain N-terminal DYL72_10665 PF01594 AI-2E family transporter DYL72_10670 PF00202 Aminotransferase class-III DYL72_10675 PF01521 Iron-sulphur cluster biosynthesis DYL72_10685 PF00873 AcrB/AcrD/AcrF family DYL72_10690 PF01551 Peptidase family M23 DYL72_10690 PF08525 Opacity-associated protein A N-terminal motif DYL72_10690 PF01476 LysM domain DYL72_10695 PF01479 S4 domain DYL72_10695 PF00579 tRNA synthetases class I (W and Y) DYL72_10705 PF03448 MgtE intracellular N domain DYL72_10705 PF01769 Divalent cation transporter DYL72_10705 PF00571 CBS domain DYL72_10710 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family DYL72_10715 PF13609 Gram-negative porin DYL72_10720 PF01272 Transcription elongation factor, GreA/GreB, C-term DYL72_10720 PF03449 Transcription elongation factor, N-terminal DYL72_10725 PF01985 CRS1 / YhbY (CRM) domain DYL72_10730 PF01728 FtsJ-like methyltransferase DYL72_10735 PF06480 FtsH Extracellular DYL72_10735 PF00004 ATPase family associated with various cellular activities (AAA) DYL72_10735 PF17862 AAA+ lid domain DYL72_10735 PF01434 Peptidase family M41 DYL72_10740 PF00809 Pterin binding enzyme DYL72_10745 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DYL72_10745 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DYL72_10745 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DYL72_10745 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DYL72_10750 PF03840 Preprotein translocase SecG subunit DYL72_10765 PF17384 RimP C-terminal SH3 domain DYL72_10765 PF02576 RimP N-terminal domain DYL72_10770 PF00575 S1 RNA binding domain DYL72_10770 PF13184 NusA-like KH domain DYL72_10770 PF08529 NusA N-terminal domain DYL72_10775 PF00009 Elongation factor Tu GTP binding domain DYL72_10775 PF11987 Translation-initiation factor 2 DYL72_10775 PF08364 Bacterial translation initiation factor IF-2 associated region DYL72_10775 PF04760 Translation initiation factor IF-2, N-terminal region DYL72_10780 PF02033 Ribosome-binding factor A DYL72_10785 PF16198 tRNA pseudouridylate synthase B C-terminal domain DYL72_10785 PF01509 TruB family pseudouridylate synthase (N terminal domain) DYL72_10785 PF09157 Pseudouridine synthase II TruB, C-terminal DYL72_10790 PF00312 Ribosomal protein S15 DYL72_10795 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DYL72_10795 PF01138 3' exoribonuclease family, domain 1 DYL72_10795 PF03725 3' exoribonuclease family, domain 2 DYL72_10795 PF00575 S1 RNA binding domain DYL72_10795 PF00013 KH domain DYL72_10800 PF13181 Tetratricopeptide repeat DYL72_10800 PF07719 Tetratricopeptide repeat DYL72_10805 PF01047 MarR family DYL72_10825 PF00990 Diguanylate cyclase, GGDEF domain DYL72_10825 PF00563 EAL domain DYL72_10825 PF03707 Bacterial signalling protein N terminal repeat DYL72_10835 PF13508 Acetyltransferase (GNAT) domain DYL72_10845 PF00583 Acetyltransferase (GNAT) family DYL72_10850 PF00563 EAL domain DYL72_10850 PF03707 Bacterial signalling protein N terminal repeat DYL72_10850 PF00990 Diguanylate cyclase, GGDEF domain DYL72_10855 PF16658 Class II release factor RF3, C-terminal domain DYL72_10855 PF03144 Elongation factor Tu domain 2 DYL72_10855 PF00009 Elongation factor Tu GTP binding domain DYL72_10860 PF00270 DEAD/DEAH box helicase DYL72_10860 PF00271 Helicase conserved C-terminal domain DYL72_10865 PF05175 Methyltransferase small domain DYL72_10870 PF05525 Branched-chain amino acid transport protein DYL72_10880 PF00152 tRNA synthetases class II (D, K and N) DYL72_10880 PF01336 OB-fold nucleic acid binding domain DYL72_10885 PF02954 Bacterial regulatory protein, Fis family DYL72_10885 PF00158 Sigma-54 interaction domain DYL72_10885 PF00072 Response regulator receiver domain DYL72_10895 PF00248 Aldo/keto reductase family DYL72_10900 PF02976 DNA mismatch repair enzyme MutH DYL72_10905 PF00293 NUDIX domain DYL72_10910 PF05524 PEP-utilising enzyme, N-terminal DYL72_10910 PF00391 PEP-utilising enzyme, mobile domain DYL72_10910 PF02896 PEP-utilising enzyme, TIM barrel domain DYL72_10910 PF01590 GAF domain DYL72_10915 PF01925 Sulfite exporter TauE/SafE DYL72_10920 PF01790 Prolipoprotein diacylglyceryl transferase DYL72_10925 PF00303 Thymidylate synthase DYL72_10930 PF02690 Na+/Pi-cotransporter DYL72_10935 PF03466 LysR substrate binding domain DYL72_10935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_10940 PF01022 Bacterial regulatory protein, arsR family DYL72_10945 PF01649 Ribosomal protein S20 DYL72_10950 PF03023 Lipid II flippase MurJ DYL72_10955 PF06574 FAD synthetase DYL72_10955 PF01687 Riboflavin kinase DYL72_10960 PF08264 Anticodon-binding domain of tRNA DYL72_10960 PF00133 tRNA synthetases class I (I, L, M and V) DYL72_10960 PF06827 Zinc finger found in FPG and IleRS DYL72_10965 PF01252 Signal peptidase (SPase) II DYL72_10970 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DYL72_10975 PF02401 LytB protein DYL72_10980 PF02554 Carbon starvation protein CstA DYL72_10995 PF13580 SIS domain DYL72_11000 PF03702 Anhydro-N-acetylmuramic acid kinase DYL72_11005 PF00933 Glycosyl hydrolase family 3 N terminal domain DYL72_11010 PF04397 LytTr DNA-binding domain DYL72_11010 PF00072 Response regulator receiver domain DYL72_11015 PF06580 Histidine kinase DYL72_11015 PF07694 5TMR of 5TMR-LYT DYL72_11020 PF00793 DAHP synthetase I family DYL72_11025 PF01817 Chorismate mutase type II DYL72_11025 PF02153 Prephenate dehydrogenase DYL72_11030 PF07238 PilZ domain DYL72_11035 PF12848 ABC transporter DYL72_11035 PF00005 ABC transporter DYL72_11040 PF01464 Transglycosylase SLT domain DYL72_11040 PF14718 Soluble lytic murein transglycosylase L domain DYL72_11050 PF01931 Protein of unknown function DUF84 DYL72_11055 PF00563 EAL domain DYL72_11055 PF00990 Diguanylate cyclase, GGDEF domain DYL72_11060 PF13416 Bacterial extracellular solute-binding protein DYL72_11065 PF01817 Chorismate mutase type II DYL72_11065 PF00800 Prephenate dehydratase DYL72_11070 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DYL72_11075 PF13525 Outer membrane lipoprotein DYL72_11080 PF00849 RNA pseudouridylate synthase DYL72_11080 PF01479 S4 domain DYL72_11090 PF00004 ATPase family associated with various cellular activities (AAA) DYL72_11090 PF17871 AAA lid domain DYL72_11090 PF02861 Clp amino terminal domain, pathogenicity island component DYL72_11090 PF10431 C-terminal, D2-small domain, of ClpB protein DYL72_11090 PF07724 AAA domain (Cdc48 subfamily) DYL72_11125 PF00881 Nitroreductase family DYL72_11130 PF00037 4Fe-4S binding domain DYL72_11140 PF04381 Putative exonuclease, RdgC DYL72_11145 PF00486 Transcriptional regulatory protein, C terminal DYL72_11145 PF00072 Response regulator receiver domain DYL72_11150 PF00512 His Kinase A (phospho-acceptor) domain DYL72_11150 PF00989 PAS fold DYL72_11150 PF11808 Phosphate regulon sensor protein PhoR DYL72_11150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYL72_11155 PF12849 PBP superfamily domain DYL72_11160 PF02541 Ppx/GppA phosphatase family DYL72_11165 PF02503 Polyphosphate kinase middle domain DYL72_11165 PF17941 Polyphosphate kinase C-terminal domain 1 DYL72_11165 PF13089 Polyphosphate kinase N-terminal domain DYL72_11165 PF13090 Polyphosphate kinase C-terminal domain 2 DYL72_11170 PF00528 Binding-protein-dependent transport system inner membrane component DYL72_11175 PF00528 Binding-protein-dependent transport system inner membrane component DYL72_11180 PF00005 ABC transporter DYL72_11185 PF01895 PhoU domain DYL72_11190 PF03932 CutC family DYL72_11195 PF10417 C-terminal domain of 1-Cys peroxiredoxin DYL72_11195 PF00578 AhpC/TSA family DYL72_11200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_11200 PF03466 LysR substrate binding domain DYL72_11205 PF01274 Malate synthase DYL72_11210 PF00463 Isocitrate lyase family DYL72_11215 PF00571 CBS domain DYL72_11220 PF02547 Queuosine biosynthesis protein DYL72_11225 PF01702 Queuine tRNA-ribosyltransferase DYL72_11230 PF02699 Preprotein translocase subunit DYL72_11235 PF13721 SecD export protein N-terminal TM region DYL72_11235 PF07549 SecD/SecF GG Motif DYL72_11235 PF02355 Protein export membrane protein DYL72_11240 PF07549 SecD/SecF GG Motif DYL72_11240 PF02355 Protein export membrane protein DYL72_11245 PF00459 Inositol monophosphatase family DYL72_11250 PF00588 SpoU rRNA Methylase family DYL72_11255 PF02082 Transcriptional regulator DYL72_11260 PF00266 Aminotransferase class-V DYL72_11265 PF01592 NifU-like N terminal domain DYL72_11270 PF01521 Iron-sulphur cluster biosynthesis DYL72_11275 PF07743 HSCB C-terminal oligomerisation domain DYL72_11275 PF00226 DnaJ domain DYL72_11280 PF00012 Hsp70 protein DYL72_11285 PF00111 2Fe-2S iron-sulfur cluster binding domain DYL72_11290 PF04384 Iron-sulphur cluster assembly DYL72_11295 PF12404 Peptidase DYL72_11295 PF00883 Cytosol aminopeptidase family, catalytic domain DYL72_11300 PF00334 Nucleoside diphosphate kinase DYL72_11305 PF04055 Radical SAM superfamily DYL72_11310 PF13464 Domain of unknown function (DUF4115) DYL72_11315 PF04551 GcpE protein DYL72_11320 PF03129 Anticodon binding domain DYL72_11320 PF13393 Histidyl-tRNA synthetase DYL72_11325 PF09976 Tetratricopeptide repeat-like domain DYL72_11330 PF13360 PQQ-like domain DYL72_11335 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DYL72_11335 PF01926 50S ribosome-binding GTPase DYL72_11345 PF13742 OB-fold nucleic acid binding domain DYL72_11345 PF02601 Exonuclease VII, large subunit DYL72_11350 PF00571 CBS domain DYL72_11350 PF00478 IMP dehydrogenase / GMP reductase domain DYL72_11355 PF02540 NAD synthase DYL72_11355 PF00958 GMP synthase C terminal domain DYL72_11355 PF00117 Glutamine amidotransferase class-I DYL72_11360 PF08543 Phosphomethylpyrimidine kinase DYL72_11365 PF00704 Glycosyl hydrolases family 18 DYL72_11365 PF06483 Chitinase C DYL72_11370 PF01184 GPR1/FUN34/yaaH family DYL72_11375 PF01235 Sodium:alanine symporter family DYL72_11380 PF01266 FAD dependent oxidoreductase DYL72_11395 PF00141 Peroxidase DYL72_11400 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DYL72_11400 PF00381 PTS HPr component phosphorylation site DYL72_11405 PF07071 KDGP aldolase DYL72_11410 PF03841 L-seryl-tRNA selenium transferase DYL72_11415 PF01979 Amidohydrolase family DYL72_11445 PF00271 Helicase conserved C-terminal domain DYL72_11445 PF04851 Type III restriction enzyme, res subunit DYL72_11445 PF17757 UvrB interaction domain DYL72_11445 PF12344 Ultra-violet resistance protein B DYL72_11445 PF02151 UvrB/uvrC motif DYL72_11515 PF04002 RadC-like JAB domain DYL72_11540 PF00145 C-5 cytosine-specific DNA methylase DYL72_11545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYL72_11545 PF00672 HAMP domain DYL72_11545 PF00512 His Kinase A (phospho-acceptor) domain DYL72_11565 PF13007 Transposase C of IS166 homeodomain DYL72_11565 PF13817 IS66 C-terminal element DYL72_11565 PF03050 Transposase IS66 family DYL72_11565 PF13005 zinc-finger binding domain of transposase IS66 DYL72_11620 PF04002 RadC-like JAB domain DYL72_11630 PF09264 Vibrio cholerae sialidase, lectin insertion DYL72_11630 PF13088 BNR repeat-like domain DYL72_11635 PF01979 Amidohydrolase family DYL72_11640 PF00480 ROK family DYL72_11645 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase DYL72_11655 PF03480 Bacterial extracellular solute-binding protein, family 7 DYL72_11660 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DYL72_11665 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DYL72_11670 PF00701 Dihydrodipicolinate synthetase family DYL72_11675 PF01380 SIS domain DYL72_11675 PF01418 Helix-turn-helix domain, rpiR family DYL72_11680 PF01344 Kelch motif DYL72_11685 PF07646 Kelch motif DYL72_11690 PF01116 Fructose-bisphosphate aldolase class-II DYL72_11695 PF01979 Amidohydrolase family DYL72_11700 PF03610 PTS system fructose IIA component DYL72_11705 PF03613 PTS system mannose/fructose/sorbose family IID component DYL72_11710 PF03609 PTS system sorbose-specific iic component DYL72_11715 PF03830 PTS system sorbose subfamily IIB component DYL72_11720 PF01380 SIS domain DYL72_11725 PF08013 Tagatose 6 phosphate kinase DYL72_11730 PF08220 DeoR-like helix-turn-helix domain DYL72_11730 PF00455 DeoR C terminal sensor domain DYL72_11735 PF00455 DeoR C terminal sensor domain DYL72_11735 PF08220 DeoR-like helix-turn-helix domain DYL72_11750 PF04002 RadC-like JAB domain DYL72_11770 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DYL72_11770 PF13542 Helix-turn-helix domain of transposase family ISL3 DYL72_11770 PF01610 Transposase DYL72_11815 PF03050 Transposase IS66 family DYL72_11815 PF13817 IS66 C-terminal element DYL72_11815 PF13005 zinc-finger binding domain of transposase IS66 DYL72_11815 PF13007 Transposase C of IS166 homeodomain DYL72_11830 PF04471 Restriction endonuclease DYL72_11830 PF14338 Mrr N-terminal domain DYL72_11835 PF00271 Helicase conserved C-terminal domain DYL72_11835 PF04851 Type III restriction enzyme, res subunit DYL72_11835 PF08463 EcoEI R protein C-terminal DYL72_11835 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DYL72_11840 PF02384 N-6 DNA Methylase DYL72_11845 PF01420 Type I restriction modification DNA specificity domain DYL72_11850 PF02463 RecF/RecN/SMC N terminal domain DYL72_11865 PF13005 zinc-finger binding domain of transposase IS66 DYL72_11865 PF13007 Transposase C of IS166 homeodomain DYL72_11865 PF13817 IS66 C-terminal element DYL72_11865 PF03050 Transposase IS66 family DYL72_11875 PF13356 Arm DNA-binding domain DYL72_11875 PF00589 Phage integrase family DYL72_11885 PF01668 SmpB protein DYL72_11890 PF03364 Polyketide cyclase / dehydrase and lipid transport DYL72_11895 PF03658 RnfH family Ubiquitin DYL72_11900 PF04355 SmpA / OmlA family DYL72_11905 PF02463 RecF/RecN/SMC N terminal domain DYL72_11910 PF01212 Beta-eliminating lyase DYL72_11915 PF01513 ATP-NAD kinase DYL72_11920 PF01025 GrpE DYL72_11925 PF00012 Hsp70 protein DYL72_11930 PF01556 DnaJ C terminal domain DYL72_11930 PF00226 DnaJ domain DYL72_11930 PF00684 DnaJ central domain DYL72_11935 PF07963 Prokaryotic N-terminal methylation motif DYL72_11935 PF00114 Pilin (bacterial filament) DYL72_11965 PF00756 Putative esterase DYL72_11970 PF08240 Alcohol dehydrogenase GroES-like domain DYL72_11970 PF00107 Zinc-binding dehydrogenase DYL72_11975 PF03466 LysR substrate binding domain DYL72_11975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_11980 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DYL72_11985 PF01464 Transglycosylase SLT domain DYL72_11985 PF00497 Bacterial extracellular solute-binding proteins, family 3 DYL72_11990 PF02769 AIR synthase related protein, C-terminal domain DYL72_11990 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DYL72_11990 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal DYL72_12005 PF06786 Uncharacterised protein family (UPF0253) DYL72_12010 PF04391 Protein of unknown function (DUF533) DYL72_12015 PF03129 Anticodon binding domain DYL72_12015 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DYL72_12015 PF04073 Aminoacyl-tRNA editing domain DYL72_12020 PF01980 tRNA-methyltransferase O DYL72_12020 PF18389 TrmO C-terminal domain DYL72_12025 PF01197 Ribosomal protein L31 DYL72_12030 PF00444 Ribosomal protein L36 DYL72_12035 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DYL72_12060 PF04287 tRNA pseudouridine synthase C DYL72_12065 PF00849 RNA pseudouridylate synthase DYL72_12070 PF02780 Transketolase, C-terminal domain DYL72_12070 PF02779 Transketolase, pyrimidine binding domain DYL72_12070 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DYL72_12075 PF00348 Polyprenyl synthetase DYL72_12080 PF02609 Exonuclease VII small subunit DYL72_12085 PF01618 MotA/TolQ/ExbB proton channel family DYL72_12090 PF00691 OmpA family DYL72_12090 PF13677 Membrane MotB of proton-channel complex MotA/MotB DYL72_12095 PF02568 Thiamine biosynthesis protein (ThiI) DYL72_12095 PF02926 THUMP domain DYL72_12100 PF03466 LysR substrate binding domain DYL72_12100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_12105 PF04241 Protein of unknown function (DUF423) DYL72_12115 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DYL72_12115 PF01367 5'-3' exonuclease, C-terminal SAM fold DYL72_12120 PF03641 Possible lysine decarboxylase DYL72_12120 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases DYL72_12120 PF11892 Domain of unknown function (DUF3412) DYL72_12125 PF00990 Diguanylate cyclase, GGDEF domain DYL72_12135 PF14489 QueF-like protein DYL72_12135 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term DYL72_12140 PF07348 Syd protein (SUKH-2) DYL72_12145 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) DYL72_12150 PF03180 NLPA lipoprotein DYL72_12155 PF00528 Binding-protein-dependent transport system inner membrane component DYL72_12160 PF00005 ABC transporter DYL72_12160 PF09383 NIL domain DYL72_12175 PF00356 Bacterial regulatory proteins, lacI family DYL72_12180 PF00367 phosphotransferase system, EIIB DYL72_12180 PF02378 Phosphotransferase system, EIIC DYL72_12185 PF16657 Maltogenic Amylase, C-terminal domain DYL72_12185 PF00128 Alpha amylase, catalytic domain DYL72_12190 PF00072 Response regulator receiver domain DYL72_12190 PF00486 Transcriptional regulatory protein, C terminal DYL72_12195 PF00672 HAMP domain DYL72_12195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYL72_12195 PF00512 His Kinase A (phospho-acceptor) domain DYL72_12230 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DYL72_12235 PF00873 AcrB/AcrD/AcrF family DYL72_12240 PF01451 Low molecular weight phosphotyrosine protein phosphatase DYL72_12245 PF02350 UDP-N-acetylglucosamine 2-epimerase DYL72_12250 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DYL72_12250 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DYL72_12250 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DYL72_12265 PF00535 Glycosyl transferase family 2 DYL72_12270 PF00534 Glycosyl transferases group 1 DYL72_12270 PF13439 Glycosyltransferase Family 4 DYL72_12275 PF00132 Bacterial transferase hexapeptide (six repeats) DYL72_12290 PF03808 Glycosyl transferase WecB/TagA/CpsF family DYL72_12295 PF12561 ToxR activated gene A lipoprotein domain DYL72_12295 PF17945 Beta/Gamma crystallin DYL72_12325 PF13614 AAA domain DYL72_12330 PF02563 Polysaccharide biosynthesis/export protein DYL72_12330 PF10531 SLBB domain DYL72_12330 PF18412 Outer-membrane lipoprotein Wza C-terminal domain DYL72_12340 PF02397 Bacterial sugar transferase DYL72_12350 PF00464 Serine hydroxymethyltransferase DYL72_12365 PF03099 Biotin/lipoate A/B protein ligase family DYL72_12370 PF04359 Protein of unknown function (DUF493) DYL72_12375 PF00768 D-alanyl-D-alanine carboxypeptidase DYL72_12375 PF07943 Penicillin-binding protein 5, C-terminal domain DYL72_12380 PF05036 Sporulation related domain DYL72_12380 PF03330 Lytic transglycolase DYL72_12385 PF01098 Cell cycle protein DYL72_12390 PF00905 Penicillin binding protein transpeptidase domain DYL72_12390 PF03717 Penicillin-binding Protein dimerisation domain DYL72_12395 PF02590 Predicted SPOUT methyltransferase DYL72_12405 PF14840 Processivity clamp loader gamma complex DNA pol III C-term DYL72_12405 PF06144 DNA polymerase III, delta subunit DYL72_12410 PF04390 Lipopolysaccharide-assembly DYL72_12415 PF08264 Anticodon-binding domain of tRNA DYL72_12415 PF00133 tRNA synthetases class I (I, L, M and V) DYL72_12415 PF13603 Leucyl-tRNA synthetase, Domain 2 DYL72_12420 PF07295 Zinc-ribbon containing domain DYL72_12425 PF00795 Carbon-nitrogen hydrolase DYL72_12430 PF00571 CBS domain DYL72_12430 PF03471 Transporter associated domain DYL72_12440 PF02562 PhoH-like protein DYL72_12445 PF00919 Uncharacterized protein family UPF0004 DYL72_12445 PF01938 TRAM domain DYL72_12445 PF04055 Radical SAM superfamily DYL72_12450 PF01494 FAD binding domain DYL72_12455 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DYL72_12460 PF05524 PEP-utilising enzyme, N-terminal DYL72_12460 PF00391 PEP-utilising enzyme, mobile domain DYL72_12460 PF02896 PEP-utilising enzyme, TIM barrel domain DYL72_12465 PF00381 PTS HPr component phosphorylation site DYL72_12470 PF00291 Pyridoxal-phosphate dependent enzyme DYL72_12480 PF04354 ZipA, C-terminal FtsZ-binding domain DYL72_12490 PF13609 Gram-negative porin DYL72_12500 PF13358 DDE superfamily endonuclease DYL72_12505 PF13411 MerR HTH family regulatory protein DYL72_12515 PF01145 SPFH domain / Band 7 family DYL72_12515 PF16200 C-terminal region of band_7 DYL72_12520 PF00085 Thioredoxin DYL72_12530 PF08338 Domain of unknown function (DUF1731) DYL72_12530 PF01370 NAD dependent epimerase/dehydratase family DYL72_12535 PF12850 Calcineurin-like phosphoesterase superfamily domain DYL72_12545 PF17323 Trans-membrane regulatory protein ToxS DYL72_12550 PF00486 Transcriptional regulatory protein, C terminal DYL72_12555 PF00183 Hsp90 protein DYL72_12555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYL72_12560 PF05191 Adenylate kinase, active site lid DYL72_12565 PF00762 Ferrochelatase DYL72_12575 PF01609 Transposase DDE domain DYL72_12575 PF13006 Insertion element 4 transposase N-terminal DYL72_12580 PF02357 Transcription termination factor nusG DYL72_12585 PF00733 Asparagine synthase DYL72_12585 PF13537 Glutamine amidotransferase domain DYL72_12590 PF02254 TrkA-N domain DYL72_12590 PF00999 Sodium/hydrogen exchanger family DYL72_12595 PF00480 ROK family DYL72_12595 PF01047 MarR family DYL72_12600 PF01979 Amidohydrolase family DYL72_12605 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DYL72_12605 PF02378 Phosphotransferase system, EIIC DYL72_12605 PF00367 phosphotransferase system, EIIB DYL72_12610 PF00749 tRNA synthetases class I (E and Q), catalytic domain DYL72_12610 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DYL72_12625 PF17848 Acetyl-coA carboxylase zinc finger domain DYL72_12625 PF01039 Carboxyl transferase domain DYL72_12630 PF08245 Mur ligase middle domain DYL72_12630 PF02875 Mur ligase family, glutamate ligase domain DYL72_12635 PF05036 Sporulation related domain DYL72_12640 PF02674 Colicin V production protein DYL72_12645 PF00156 Phosphoribosyl transferase domain DYL72_12650 PF13726 Na+-H+ antiporter family DYL72_12650 PF03553 Na+/H+ antiporter family DYL72_12655 PF00929 Exonuclease DYL72_12660 PF18393 MotY N-terminal domain DYL72_12660 PF00691 OmpA family DYL72_12665 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DYL72_12690 PF13005 zinc-finger binding domain of transposase IS66 DYL72_12690 PF13007 Transposase C of IS166 homeodomain DYL72_12690 PF13817 IS66 C-terminal element DYL72_12690 PF03050 Transposase IS66 family DYL72_12710 PF00633 Helix-hairpin-helix motif DYL72_12710 PF00730 HhH-GPD superfamily base excision DNA repair protein DYL72_12710 PF10576 Iron-sulfur binding domain of endonuclease III DYL72_12725 PF03116 NQR2, RnfD, RnfE family DYL72_12730 PF13375 RnfC Barrel sandwich hybrid domain DYL72_12730 PF10531 SLBB domain DYL72_12730 PF12838 4Fe-4S dicluster domain DYL72_12730 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DYL72_12735 PF04060 Putative Fe-S cluster DYL72_12740 PF02508 Rnf-Nqr subunit, membrane protein DYL72_12745 PF17837 4'-phosphopantetheinyl transferase N-terminal domain DYL72_12745 PF01648 4'-phosphopantetheinyl transferase superfamily DYL72_12750 PF07715 TonB-dependent Receptor Plug Domain DYL72_12755 PF00756 Putative esterase DYL72_12755 PF11806 Domain of unknown function (DUF3327) DYL72_12765 PF00668 Condensation domain DYL72_12765 PF00550 Phosphopantetheine attachment site DYL72_12765 PF13193 AMP-binding enzyme C-terminal domain DYL72_12765 PF00501 AMP-binding enzyme DYL72_12770 PF05977 Transmembrane secretion effector DYL72_12775 PF00857 Isochorismatase family DYL72_12775 PF00550 Phosphopantetheine attachment site DYL72_12780 PF13193 AMP-binding enzyme C-terminal domain DYL72_12780 PF00501 AMP-binding enzyme DYL72_12785 PF00425 chorismate binding enzyme DYL72_12795 PF00793 DAHP synthetase I family DYL72_12800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_12800 PF03466 LysR substrate binding domain DYL72_12805 PF00593 TonB dependent receptor DYL72_12805 PF07715 TonB-dependent Receptor Plug Domain DYL72_12820 PF03466 LysR substrate binding domain DYL72_12820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_12825 PF13737 Transposase DDE domain DYL72_12830 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DYL72_12835 PF00873 AcrB/AcrD/AcrF family DYL72_12840 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DYL72_12850 PF07690 Major Facilitator Superfamily DYL72_12860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_12860 PF03466 LysR substrate binding domain DYL72_12870 PF00271 Helicase conserved C-terminal domain DYL72_12870 PF12344 Ultra-violet resistance protein B DYL72_12870 PF17757 UvrB interaction domain DYL72_12870 PF02151 UvrB/uvrC motif DYL72_12870 PF04851 Type III restriction enzyme, res subunit DYL72_12875 PF00072 Response regulator receiver domain DYL72_12875 PF00158 Sigma-54 interaction domain DYL72_12875 PF02954 Bacterial regulatory protein, Fis family DYL72_12880 PF01627 Hpt domain DYL72_12885 PF01933 Uncharacterised protein family UPF0052 DYL72_12890 PF04055 Radical SAM superfamily DYL72_12890 PF06463 Molybdenum Cofactor Synthesis C DYL72_12895 PF00994 Probable molybdopterin binding domain DYL72_12900 PF01967 MoaC family DYL72_12905 PF02597 ThiS family DYL72_12910 PF02391 MoaE protein DYL72_12915 PF07694 5TMR of 5TMR-LYT DYL72_12915 PF00990 Diguanylate cyclase, GGDEF domain DYL72_12920 PF07085 DRTGG domain DYL72_12920 PF00392 Bacterial regulatory proteins, gntR family DYL72_12920 PF00571 CBS domain DYL72_12920 PF03061 Thioesterase superfamily DYL72_12925 PF13358 DDE superfamily endonuclease DYL72_12930 PF00403 Heavy-metal-associated domain DYL72_12935 PF01048 Phosphorylase superfamily DYL72_12945 PF09334 tRNA synthetases class I (M) DYL72_12945 PF01588 Putative tRNA binding domain DYL72_12950 PF10609 NUBPL iron-transfer P-loop NTPase DYL72_12955 PF00485 Phosphoribulokinase / Uridine kinase family DYL72_12960 PF05170 AsmA family DYL72_12965 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP DYL72_12965 PF12557 Cob(I)alamin adenosyltransferase N terminal DYL72_12970 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) DYL72_12975 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) DYL72_12985 PF08281 Sigma-70, region 4 DYL72_12985 PF04542 Sigma-70 region 2 DYL72_12995 PF00108 Thiolase, N-terminal domain DYL72_12995 PF02803 Thiolase, C-terminal domain DYL72_13000 PF00378 Enoyl-CoA hydratase/isomerase DYL72_13000 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DYL72_13000 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DYL72_13005 PF00881 Nitroreductase family DYL72_13010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_13010 PF03466 LysR substrate binding domain DYL72_13015 PF00072 Response regulator receiver domain DYL72_13025 PF04304 Protein of unknown function (DUF454) DYL72_13030 PF00156 Phosphoribosyl transferase domain DYL72_13035 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding DYL72_13035 PF12169 DNA polymerase III subunits gamma and tau domain III DYL72_13035 PF12170 DNA polymerase III tau subunit V interacting with alpha DYL72_13040 PF02575 YbaB/EbfC DNA-binding family DYL72_13050 PF03692 Putative zinc- or iron-chelating domain DYL72_13055 PF03692 Putative zinc- or iron-chelating domain DYL72_13105 PF13817 IS66 C-terminal element DYL72_13105 PF13005 zinc-finger binding domain of transposase IS66 DYL72_13105 PF13007 Transposase C of IS166 homeodomain DYL72_13105 PF03050 Transposase IS66 family DYL72_13125 PF13542 Helix-turn-helix domain of transposase family ISL3 DYL72_13125 PF01610 Transposase DYL72_13125 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DYL72_13140 PF13847 Methyltransferase domain DYL72_13145 PF01263 Aldose 1-epimerase DYL72_13150 PF13006 Insertion element 4 transposase N-terminal DYL72_13150 PF01609 Transposase DDE domain DYL72_13155 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DYL72_13155 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DYL72_13160 PF01641 SelR domain DYL72_13170 PF07023 Protein of unknown function (DUF1315) DYL72_13175 PF17763 Glutaminase/Asparaginase C-terminal domain DYL72_13175 PF00710 Asparaginase, N-terminal DYL72_13180 PF01343 Peptidase family S49 DYL72_13185 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYL72_13185 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DYL72_13190 PF01842 ACT domain DYL72_13190 PF00551 Formyl transferase DYL72_13200 PF04851 Type III restriction enzyme, res subunit DYL72_13200 PF13307 Helicase C-terminal domain DYL72_13205 PF00814 Glycoprotease family DYL72_13220 PF00561 alpha/beta hydrolase fold DYL72_13225 PF13193 AMP-binding enzyme C-terminal domain DYL72_13225 PF00501 AMP-binding enzyme DYL72_13230 PF00570 HRDC domain DYL72_13230 PF01612 3'-5' exonuclease DYL72_13235 PF01609 Transposase DDE domain DYL72_13235 PF13006 Insertion element 4 transposase N-terminal DYL72_13240 PF03776 Septum formation topological specificity factor MinE DYL72_13245 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DYL72_13250 PF05209 Septum formation inhibitor MinC, N-terminal domain DYL72_13250 PF03775 Septum formation inhibitor MinC, C-terminal domain DYL72_13255 PF05166 YcgL domain DYL72_13260 PF13406 Transglycosylase SLT domain DYL72_13265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_13265 PF03466 LysR substrate binding domain DYL72_13270 PF07670 Nucleoside recognition DYL72_13270 PF01773 Na+ dependent nucleoside transporter N-terminus DYL72_13270 PF07662 Na+ dependent nucleoside transporter C-terminus DYL72_13275 PF06483 Chitinase C DYL72_13275 PF00704 Glycosyl hydrolases family 18 DYL72_13280 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DYL72_13280 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DYL72_13290 PF01551 Peptidase family M23 DYL72_13295 PF09905 DNA-binding protein VF530 DYL72_13305 PF00809 Pterin binding enzyme DYL72_13305 PF02574 Homocysteine S-methyltransferase DYL72_13305 PF02310 B12 binding domain DYL72_13305 PF02607 B12 binding domain DYL72_13305 PF02965 Vitamin B12 dependent methionine synthase, activation domain DYL72_13310 PF02028 BCCT, betaine/carnitine/choline family transporter DYL72_13315 PF16657 Maltogenic Amylase, C-terminal domain DYL72_13315 PF02903 Alpha amylase, N-terminal ig-like domain DYL72_13315 PF00128 Alpha amylase, catalytic domain DYL72_13320 PF00270 DEAD/DEAH box helicase DYL72_13320 PF00271 Helicase conserved C-terminal domain DYL72_13330 PF03315 Serine dehydratase beta chain DYL72_13330 PF03313 Serine dehydratase alpha chain DYL72_13335 PF02696 Uncharacterized ACR, YdiU/UPF0061 family DYL72_13340 PF00486 Transcriptional regulatory protein, C terminal DYL72_13340 PF00072 Response regulator receiver domain DYL72_13345 PF00672 HAMP domain DYL72_13345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYL72_13345 PF00512 His Kinase A (phospho-acceptor) domain DYL72_13350 PF01547 Bacterial extracellular solute-binding protein DYL72_13360 PF03480 Bacterial extracellular solute-binding protein, family 7 DYL72_13365 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DYL72_13370 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DYL72_13375 PF00072 Response regulator receiver domain DYL72_13375 PF00158 Sigma-54 interaction domain DYL72_13375 PF02954 Bacterial regulatory protein, Fis family DYL72_13380 PF00512 His Kinase A (phospho-acceptor) domain DYL72_13380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYL72_13380 PF02743 Cache domain DYL72_13390 PF05698 Bacterial trigger factor protein (TF) C-terminus DYL72_13390 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DYL72_13390 PF05697 Bacterial trigger factor protein (TF) DYL72_13395 PF00574 Clp protease DYL72_13400 PF06689 ClpX C4-type zinc finger DYL72_13400 PF10431 C-terminal, D2-small domain, of ClpB protein DYL72_13400 PF07724 AAA domain (Cdc48 subfamily) DYL72_13405 PF00004 ATPase family associated with various cellular activities (AAA) DYL72_13405 PF05362 Lon protease (S16) C-terminal proteolytic domain DYL72_13405 PF02190 ATP-dependent protease La (LON) substrate-binding domain DYL72_13410 PF00216 Bacterial DNA-binding protein DYL72_13415 PF13145 PPIC-type PPIASE domain DYL72_13425 PF02224 Cytidylate kinase DYL72_13430 PF00575 S1 RNA binding domain DYL72_13440 PF06305 Lipopolysaccharide assembly protein A domain DYL72_13445 PF18073 Rubredoxin metal binding domain DYL72_13450 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DYL72_13470 PF03466 LysR substrate binding domain DYL72_13470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_13480 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DYL72_13480 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DYL72_13485 PF01037 Lrp/AsnC ligand binding domain DYL72_13490 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DYL72_13490 PF17854 FtsK alpha domain DYL72_13490 PF09397 Ftsk gamma domain DYL72_13490 PF01580 FtsK/SpoIIIE family DYL72_13500 PF01435 Peptidase family M48 DYL72_13510 PF00106 short chain dehydrogenase DYL72_13535 PF16036 Chalcone isomerase-like DYL72_13545 PF08497 Radical SAM N-terminal DYL72_13545 PF11842 Domain of unknown function (DUF3362) DYL72_13545 PF04055 Radical SAM superfamily DYL72_13550 PF00089 Trypsin DYL72_13555 PF03707 Bacterial signalling protein N terminal repeat DYL72_13555 PF00990 Diguanylate cyclase, GGDEF domain DYL72_13555 PF00563 EAL domain DYL72_13570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_13570 PF03466 LysR substrate binding domain DYL72_13575 PF08267 Cobalamin-independent synthase, N-terminal domain DYL72_13575 PF01717 Cobalamin-independent synthase, Catalytic domain DYL72_13585 PF03795 YCII-related domain DYL72_13590 PF03061 Thioesterase superfamily DYL72_13595 PF04279 Intracellular septation protein A DYL72_13605 PF00375 Sodium:dicarboxylate symporter family DYL72_13620 PF00291 Pyridoxal-phosphate dependent enzyme DYL72_13625 PF00218 Indole-3-glycerol phosphate synthase DYL72_13625 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DYL72_13630 PF00591 Glycosyl transferase family, a/b domain DYL72_13630 PF02885 Glycosyl transferase family, helical bundle domain DYL72_13635 PF00117 Glutamine amidotransferase class-I DYL72_13640 PF04715 Anthranilate synthase component I, N terminal region DYL72_13640 PF00425 chorismate binding enzyme DYL72_13645 PF08056 Tryptophan operon leader peptide DYL72_13650 PF02811 PHP domain DYL72_13655 PF01300 Telomere recombination DYL72_13660 PF01479 S4 domain DYL72_13660 PF00849 RNA pseudouridylate synthase DYL72_13665 PF00664 ABC transporter transmembrane region DYL72_13665 PF00005 ABC transporter DYL72_13670 PF00664 ABC transporter transmembrane region DYL72_13670 PF00005 ABC transporter DYL72_13675 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYL72_13680 PF00990 Diguanylate cyclase, GGDEF domain DYL72_13680 PF00072 Response regulator receiver domain DYL72_13690 PF00266 Aminotransferase class-V DYL72_13695 PF02698 DUF218 domain DYL72_13705 PF00390 Malic enzyme, N-terminal domain DYL72_13705 PF03949 Malic enzyme, NAD binding domain DYL72_13715 PF01259 SAICAR synthetase DYL72_13720 PF02080 TrkA-C domain DYL72_13720 PF06826 Predicted Permease Membrane Region DYL72_13725 PF00462 Glutaredoxin DYL72_13730 PF00465 Iron-containing alcohol dehydrogenase DYL72_13735 PF01418 Helix-turn-helix domain, rpiR family DYL72_13735 PF01380 SIS domain DYL72_13740 PF00282 Pyridoxal-dependent decarboxylase conserved domain DYL72_13750 PF03956 Lysine exporter LysO DYL72_13760 PF04993 TfoX N-terminal domain DYL72_13760 PF04994 TfoX C-terminal domain DYL72_13775 PF00497 Bacterial extracellular solute-binding proteins, family 3 DYL72_13775 PF00512 His Kinase A (phospho-acceptor) domain DYL72_13775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYL72_13785 PF00266 Aminotransferase class-V DYL72_13790 PF00206 Lyase DYL72_13790 PF08328 Adenylosuccinate lyase C-terminal DYL72_13795 PF04356 Protein of unknown function (DUF489) DYL72_13810 PF00294 pfkB family carbohydrate kinase DYL72_13815 PF00816 H-NS histone family DYL72_13820 PF03553 Na+/H+ antiporter family DYL72_13825 PF01634 ATP phosphoribosyltransferase DYL72_13825 PF08029 HisG, C-terminal domain DYL72_13830 PF00815 Histidinol dehydrogenase DYL72_13835 PF00155 Aminotransferase class I and II DYL72_13840 PF00475 Imidazoleglycerol-phosphate dehydratase DYL72_13840 PF08645 Polynucleotide kinase 3 phosphatase DYL72_13845 PF00117 Glutamine amidotransferase class-I DYL72_13850 PF00977 Histidine biosynthesis protein DYL72_13855 PF00977 Histidine biosynthesis protein DYL72_13860 PF01502 Phosphoribosyl-AMP cyclohydrolase DYL72_13860 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DYL72_13865 PF00849 RNA pseudouridylate synthase DYL72_13870 PF03971 Monomeric isocitrate dehydrogenase DYL72_13875 PF00313 'Cold-shock' DNA-binding domain DYL72_13880 PF02617 ATP-dependent Clp protease adaptor protein ClpS DYL72_13885 PF07724 AAA domain (Cdc48 subfamily) DYL72_13885 PF00004 ATPase family associated with various cellular activities (AAA) DYL72_13885 PF17871 AAA lid domain DYL72_13885 PF10431 C-terminal, D2-small domain, of ClpB protein DYL72_13885 PF02861 Clp amino terminal domain, pathogenicity island component DYL72_13890 PF01176 Translation initiation factor 1A / IF-1 DYL72_13895 PF04377 Arginine-tRNA-protein transferase, C terminus DYL72_13895 PF04376 Arginine-tRNA-protein transferase, N terminus DYL72_13900 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DYL72_13905 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DYL72_13910 PF10692 Protein of unknown function (DUF2498) DYL72_13915 PF01131 DNA topoisomerase DYL72_13915 PF08272 Topoisomerase I zinc-ribbon-like DYL72_13915 PF01751 Toprim domain DYL72_13915 PF01396 Topoisomerase DNA binding C4 zinc finger DYL72_13920 PF01610 Transposase DYL72_13920 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DYL72_13920 PF13542 Helix-turn-helix domain of transposase family ISL3 DYL72_13925 PF00483 Nucleotidyl transferase DYL72_13930 PF00534 Glycosyl transferases group 1 DYL72_13930 PF08323 Starch synthase catalytic domain DYL72_13950 PF04993 TfoX N-terminal domain DYL72_13950 PF04994 TfoX C-terminal domain DYL72_13955 PF00356 Bacterial regulatory proteins, lacI family DYL72_13960 PF02613 Nitrate reductase delta subunit DYL72_13965 PF00072 Response regulator receiver domain DYL72_13965 PF00486 Transcriptional regulatory protein, C terminal DYL72_13970 PF02698 DUF218 domain DYL72_13980 PF17192 MukF middle domain DYL72_13980 PF17193 MukF C-terminal domain DYL72_13980 PF03882 MukF winged-helix domain DYL72_13985 PF04288 MukE-like family DYL72_13990 PF04310 MukB N-terminal DYL72_13990 PF16330 MukB hinge domain DYL72_14005 PF08443 RimK-like ATP-grasp domain DYL72_14005 PF18030 RimK PreATP-grasp domain DYL72_14010 PF08003 Protein of unknown function (DUF1698) DYL72_14015 PF13649 Methyltransferase domain DYL72_14020 PF01904 Protein of unknown function DUF72 DYL72_14025 PF01336 OB-fold nucleic acid binding domain DYL72_14025 PF00152 tRNA synthetases class II (D, K and N) DYL72_14025 PF02938 GAD domain DYL72_14030 PF00265 Thymidine kinase DYL72_14035 PF02281 Transposase Tn5 dimerisation domain DYL72_14035 PF01609 Transposase DDE domain DYL72_14035 PF14706 Transposase DNA-binding DYL72_14040 PF02698 DUF218 domain DYL72_14050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_14050 PF03466 LysR substrate binding domain DYL72_14065 PF01226 Formate/nitrite transporter DYL72_14070 PF06796 Periplasmic nitrate reductase protein NapE DYL72_14075 PF03264 NapC/NirT cytochrome c family, N-terminal region DYL72_14080 PF18364 Molybdopterin oxidoreductase N-terminal domain DYL72_14080 PF01568 Molydopterin dinucleotide binding domain DYL72_14080 PF00384 Molybdopterin oxidoreductase DYL72_14090 PF01368 DHH family DYL72_14090 PF02833 DHHA2 domain DYL72_14100 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DYL72_14100 PF13542 Helix-turn-helix domain of transposase family ISL3 DYL72_14100 PF01610 Transposase DYL72_14120 PF03793 PASTA domain DYL72_14120 PF00069 Protein kinase domain DYL72_14135 PF13817 IS66 C-terminal element DYL72_14135 PF03050 Transposase IS66 family DYL72_14135 PF13005 zinc-finger binding domain of transposase IS66 DYL72_14135 PF13007 Transposase C of IS166 homeodomain DYL72_14140 PF00589 Phage integrase family DYL72_14140 PF02899 Phage integrase, N-terminal SAM-like domain DYL72_14165 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DYL72_14175 PF13005 zinc-finger binding domain of transposase IS66 DYL72_14175 PF13817 IS66 C-terminal element DYL72_14175 PF03050 Transposase IS66 family DYL72_14175 PF13007 Transposase C of IS166 homeodomain DYL72_14195 PF00005 ABC transporter DYL72_14200 PF00005 ABC transporter DYL72_14200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DYL72_14205 PF00528 Binding-protein-dependent transport system inner membrane component DYL72_14205 PF12911 N-terminal TM domain of oligopeptide transport permease C DYL72_14210 PF00528 Binding-protein-dependent transport system inner membrane component DYL72_14215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DYL72_14220 PF00158 Sigma-54 interaction domain DYL72_14220 PF02954 Bacterial regulatory protein, Fis family DYL72_14225 PF04012 PspA/IM30 family DYL72_14230 PF06667 Phage shock protein B DYL72_14240 PF00958 GMP synthase C terminal domain DYL72_14240 PF03352 Methyladenine glycosylase DYL72_14240 PF13673 Acetyltransferase (GNAT) domain DYL72_14240 PF13302 Acetyltransferase (GNAT) domain DYL72_14240 PF00117 Glutamine amidotransferase class-I DYL72_14245 PF01053 Cys/Met metabolism PLP-dependent enzyme DYL72_14250 PF13091 PLD-like domain DYL72_14250 PF13396 Phospholipase_D-nuclease N-terminal DYL72_14255 PF00209 Sodium:neurotransmitter symporter family DYL72_14260 PF00849 RNA pseudouridylate synthase DYL72_14275 PF01066 CDP-alcohol phosphatidyltransferase DYL72_14280 PF00005 ABC transporter DYL72_14285 PF00528 Binding-protein-dependent transport system inner membrane component DYL72_14290 PF13416 Bacterial extracellular solute-binding protein DYL72_14300 PF06945 Protein of unknown function (DUF1289) DYL72_14310 PF02872 5'-nucleotidase, C-terminal domain DYL72_14310 PF00149 Calcineurin-like phosphoesterase DYL72_14320 PF00270 DEAD/DEAH box helicase DYL72_14320 PF00271 Helicase conserved C-terminal domain DYL72_14340 PF00512 His Kinase A (phospho-acceptor) domain DYL72_14340 PF00672 HAMP domain DYL72_14340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYL72_14345 PF00486 Transcriptional regulatory protein, C terminal DYL72_14345 PF00072 Response regulator receiver domain DYL72_14355 PF00271 Helicase conserved C-terminal domain DYL72_14355 PF04851 Type III restriction enzyme, res subunit DYL72_14360 PF00849 RNA pseudouridylate synthase DYL72_14360 PF01479 S4 domain DYL72_14365 PF07690 Major Facilitator Superfamily DYL72_14375 PF13460 NAD(P)H-binding DYL72_14375 PF11066 Protein of unknown function (DUF2867) DYL72_14380 PF01554 MatE DYL72_14385 PF00005 ABC transporter DYL72_14400 PF06965 Na+/H+ antiporter 1 DYL72_14410 PF00202 Aminotransferase class-III DYL72_14415 PF16653 Saccharopine dehydrogenase C-terminal domain DYL72_14415 PF03435 Saccharopine dehydrogenase NADP binding domain DYL72_14425 PF17200 Single Cache domain 2 DYL72_14425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYL72_14425 PF00672 HAMP domain DYL72_14440 PF00994 Probable molybdopterin binding domain DYL72_14450 PF00970 Oxidoreductase FAD-binding domain DYL72_14450 PF00175 Oxidoreductase NAD-binding domain DYL72_14450 PF00111 2Fe-2S iron-sulfur cluster binding domain DYL72_14455 PF00268 Ribonucleotide reductase, small chain DYL72_14460 PF02867 Ribonucleotide reductase, barrel domain DYL72_14460 PF03477 ATP cone domain DYL72_14460 PF00317 Ribonucleotide reductase, all-alpha domain DYL72_14470 PF00521 DNA gyrase/topoisomerase IV, subunit A DYL72_14470 PF03989 DNA gyrase C-terminal domain, beta-propeller DYL72_14475 PF00672 HAMP domain DYL72_14475 PF12729 Four helix bundle sensory module for signal transduction DYL72_14475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYL72_14480 PF01238 Phosphomannose isomerase type I DYL72_14485 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DYL72_14485 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DYL72_14485 PF02378 Phosphotransferase system, EIIC DYL72_14490 PF12833 Helix-turn-helix domain DYL72_14500 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DYL72_14510 PF02001 Protein of unknown function DUF134 DYL72_14525 PF13407 Periplasmic binding protein domain DYL72_14530 PF00005 ABC transporter DYL72_14535 PF02653 Branched-chain amino acid transport system / permease component DYL72_14540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_14540 PF03466 LysR substrate binding domain DYL72_14545 PF13358 DDE superfamily endonuclease DYL72_14550 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DYL72_14555 PF01219 Prokaryotic diacylglycerol kinase DYL72_14560 PF00672 HAMP domain DYL72_14560 PF00512 His Kinase A (phospho-acceptor) domain DYL72_14560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYL72_14565 PF00072 Response regulator receiver domain DYL72_14565 PF00486 Transcriptional regulatory protein, C terminal DYL72_14570 PF01970 Tripartite tricarboxylate transporter TctA family DYL72_14600 PF00285 Citrate synthase, C-terminal domain DYL72_14605 PF00330 Aconitase family (aconitate hydratase) DYL72_14605 PF00694 Aconitase C-terminal domain DYL72_14610 PF04303 PrpF protein DYL72_14615 PF16177 Acetyl-coenzyme A synthetase N-terminus DYL72_14615 PF13193 AMP-binding enzyme C-terminal domain DYL72_14615 PF00501 AMP-binding enzyme DYL72_14635 PF04055 Radical SAM superfamily DYL72_14640 PF06508 Queuosine biosynthesis protein QueC DYL72_14665 PF17785 PUA-like domain DYL72_14665 PF10672 S-adenosylmethionine-dependent methyltransferase DYL72_14670 PF00708 Acylphosphatase DYL72_14675 PF00872 Transposase, Mutator family DYL72_14680 PF04358 DsrC like protein DYL72_14685 PF01027 Inhibitor of apoptosis-promoting Bax1 DYL72_14690 PF00005 ABC transporter DYL72_14695 PF00528 Binding-protein-dependent transport system inner membrane component DYL72_14700 PF00528 Binding-protein-dependent transport system inner membrane component DYL72_14705 PF00497 Bacterial extracellular solute-binding proteins, family 3 DYL72_14710 PF14824 Sirohaem biosynthesis protein central DYL72_14710 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DYL72_14710 PF10414 Sirohaem synthase dimerisation region DYL72_14715 PF04461 Protein of unknown function (DUF520) DYL72_14720 PF00793 DAHP synthetase I family DYL72_14725 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DYL72_14725 PF02896 PEP-utilising enzyme, TIM barrel domain DYL72_14725 PF00391 PEP-utilising enzyme, mobile domain DYL72_14740 PF13509 S1 domain DYL72_14740 PF17783 CvfB-like winged helix domain DYL72_14745 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF DYL72_14745 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF DYL72_14745 PF01189 16S rRNA methyltransferase RsmB/F DYL72_14750 PF02470 MlaD protein DYL72_14755 PF04403 Paraquat-inducible protein A DYL72_14760 PF00664 ABC transporter transmembrane region DYL72_14760 PF00005 ABC transporter DYL72_14765 PF13185 GAF domain DYL72_14775 PF00595 PDZ domain DYL72_14775 PF03572 Peptidase family S41 DYL72_14775 PF17804 Tail specific protease N-terminal domain DYL72_14775 PF11818 C-terminal domain of tail specific protease (DUF3340) DYL72_14785 PF01433 Peptidase family M1 domain DYL72_14785 PF17432 Domain of unknown function (DUF3458_C) ARM repeats DYL72_14785 PF11940 Domain of unknown function (DUF3458) Ig-like fold DYL72_14795 PF05088 Bacterial NAD-glutamate dehydrogenase DYL72_14800 PF01180 Dihydroorotate dehydrogenase DYL72_14805 PF07126 Cell-division protein ZapC DYL72_14810 PF02926 THUMP domain DYL72_14810 PF10672 S-adenosylmethionine-dependent methyltransferase DYL72_14810 PF01170 Putative RNA methylase family UPF0020 DYL72_14830 PF04957 Ribosome modulation factor DYL72_14835 PF07977 FabA-like domain DYL72_14840 PF05362 Lon protease (S16) C-terminal proteolytic domain DYL72_14840 PF13654 AAA domain DYL72_14845 PF17414 MatP C-terminal ribbon-helix-helix domain DYL72_14845 PF06303 MatP N-terminal domain DYL72_14860 PF13817 IS66 C-terminal element DYL72_14860 PF03050 Transposase IS66 family DYL72_14860 PF13007 Transposase C of IS166 homeodomain DYL72_14860 PF13005 zinc-finger binding domain of transposase IS66 DYL72_14890 PF13817 IS66 C-terminal element DYL72_14890 PF13005 zinc-finger binding domain of transposase IS66 DYL72_14890 PF13007 Transposase C of IS166 homeodomain DYL72_14890 PF03050 Transposase IS66 family DYL72_14895 PF00582 Universal stress protein family DYL72_14900 PF00027 Cyclic nucleotide-binding domain DYL72_14900 PF13545 Crp-like helix-turn-helix domain DYL72_14915 PF00403 Heavy-metal-associated domain DYL72_14925 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP DYL72_14925 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DYL72_14940 PF00115 Cytochrome C and Quinol oxidase polypeptide I DYL72_14960 PF03050 Transposase IS66 family DYL72_14960 PF13005 zinc-finger binding domain of transposase IS66 DYL72_14960 PF13007 Transposase C of IS166 homeodomain DYL72_14960 PF13817 IS66 C-terminal element DYL72_14980 PF13737 Transposase DDE domain DYL72_15180 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system DYL72_15410 PF13005 zinc-finger binding domain of transposase IS66 DYL72_15410 PF13007 Transposase C of IS166 homeodomain DYL72_15410 PF03050 Transposase IS66 family DYL72_15410 PF13817 IS66 C-terminal element DYL72_15425 PF13362 Toprim domain DYL72_15425 PF18818 Metallopeptidase superfamily domain DYL72_15425 PF08401 Domain of unknown function (DUF1738) DYL72_15530 PF00589 Phage integrase family DYL72_15530 PF02899 Phage integrase, N-terminal SAM-like domain DYL72_15595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_15595 PF03466 LysR substrate binding domain DYL72_15630 PF05861 Bacterial phosphonate metabolism protein (PhnI) DYL72_15635 PF06007 Phosphonate metabolism protein PhnJ DYL72_15640 PF00005 ABC transporter DYL72_15645 PF00005 ABC transporter DYL72_15650 PF13609 Gram-negative porin DYL72_16000 PF01557 Fumarylacetoacetate (FAA) hydrolase family DYL72_16015 PF00462 Glutaredoxin DYL72_16025 PF07690 Major Facilitator Superfamily DYL72_16030 PF03466 LysR substrate binding domain DYL72_16030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_16035 PF00990 Diguanylate cyclase, GGDEF domain DYL72_16035 PF00563 EAL domain DYL72_16035 PF08448 PAS fold DYL72_16035 PF08447 PAS fold DYL72_16040 PF01551 Peptidase family M23 DYL72_16040 PF08525 Opacity-associated protein A N-terminal motif DYL72_16040 PF01476 LysM domain DYL72_16050 PF01740 STAS domain DYL72_16050 PF00916 Sulfate permease family DYL72_16065 PF07694 5TMR of 5TMR-LYT DYL72_16065 PF00990 Diguanylate cyclase, GGDEF domain DYL72_16070 PF01610 Transposase DYL72_16070 PF13542 Helix-turn-helix domain of transposase family ISL3 DYL72_16070 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DYL72_16075 PF00005 ABC transporter DYL72_16080 PF00528 Binding-protein-dependent transport system inner membrane component DYL72_16085 PF00528 Binding-protein-dependent transport system inner membrane component DYL72_16090 PF12849 PBP superfamily domain DYL72_16100 PF00392 Bacterial regulatory proteins, gntR family DYL72_16100 PF00155 Aminotransferase class I and II DYL72_16105 PF13302 Acetyltransferase (GNAT) domain DYL72_16120 PF02868 Thermolysin metallopeptidase, alpha-helical domain DYL72_16120 PF03413 Peptidase propeptide and YPEB domain DYL72_16120 PF01447 Thermolysin metallopeptidase, catalytic domain DYL72_16120 PF07504 Fungalysin/Thermolysin Propeptide Motif DYL72_16120 PF04151 Bacterial pre-peptidase C-terminal domain DYL72_16140 PF07690 Major Facilitator Superfamily DYL72_16145 PF03009 Glycerophosphoryl diester phosphodiesterase family DYL72_16150 PF03466 LysR substrate binding domain DYL72_16150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_16155 PF03306 Alpha-acetolactate decarboxylase DYL72_16160 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DYL72_16160 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DYL72_16160 PF00205 Thiamine pyrophosphate enzyme, central domain DYL72_16175 PF03466 LysR substrate binding domain DYL72_16175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_16180 PF02652 L-lactate permease DYL72_16185 PF01070 FMN-dependent dehydrogenase DYL72_16200 PF01161 Phosphatidylethanolamine-binding protein DYL72_16215 PF01545 Cation efflux family DYL72_16220 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) DYL72_16230 PF03372 Endonuclease/Exonuclease/phosphatase family DYL72_16245 PF13358 DDE superfamily endonuclease DYL72_16255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYL72_16255 PF08447 PAS fold DYL72_16270 PF01554 MatE DYL72_16285 PF07690 Major Facilitator Superfamily DYL72_16290 PF00672 HAMP domain DYL72_16290 PF12729 Four helix bundle sensory module for signal transduction DYL72_16290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYL72_16295 PF13654 AAA domain DYL72_16295 PF05362 Lon protease (S16) C-terminal proteolytic domain DYL72_16305 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DYL72_16305 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DYL72_16310 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DYL72_16315 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DYL72_16315 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DYL72_16320 PF03466 LysR substrate binding domain DYL72_16320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_16335 PF00356 Bacterial regulatory proteins, lacI family DYL72_16340 PF00294 pfkB family carbohydrate kinase DYL72_16345 PF13407 Periplasmic binding protein domain DYL72_16350 PF02653 Branched-chain amino acid transport system / permease component DYL72_16355 PF00005 ABC transporter DYL72_16360 PF05025 RbsD / FucU transport protein family DYL72_16375 PF13007 Transposase C of IS166 homeodomain DYL72_16375 PF13817 IS66 C-terminal element DYL72_16375 PF03050 Transposase IS66 family DYL72_16375 PF13005 zinc-finger binding domain of transposase IS66 DYL72_16415 PF16671 Actin cross-linking domain DYL72_16415 PF04717 Type VI secretion system, phage-baseplate injector DYL72_16420 PF05638 Type VI secretion system effector, Hcp DYL72_16425 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DYL72_16425 PF02806 Alpha amylase, C-terminal all-beta domain DYL72_16425 PF00128 Alpha amylase, catalytic domain DYL72_16430 PF02446 4-alpha-glucanotransferase DYL72_16435 PF00343 Carbohydrate phosphorylase DYL72_16440 PF00196 Bacterial regulatory proteins, luxR family DYL72_16440 PF17874 MalT-like TPR region DYL72_16445 PF10928 Protein of unknown function (DUF2810) DYL72_16450 PF00672 HAMP domain DYL72_16450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYL72_16450 PF17200 Single Cache domain 2 DYL72_16460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYL72_16460 PF16591 Helical bimodular sensor domain DYL72_16460 PF00672 HAMP domain DYL72_16465 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DYL72_16475 PF00171 Aldehyde dehydrogenase family DYL72_16480 PF01037 Lrp/AsnC ligand binding domain DYL72_16490 PF13358 DDE superfamily endonuclease DYL72_16505 PF00474 Sodium:solute symporter family DYL72_16515 PF18327 Proline utilization A proline dehydrogenase N-terminal domain DYL72_16515 PF14850 DNA-binding domain of Proline dehydrogenase DYL72_16515 PF01619 Proline dehydrogenase DYL72_16515 PF00171 Aldehyde dehydrogenase family DYL72_16520 PF12833 Helix-turn-helix domain DYL72_16530 PF03781 Sulfatase-modifying factor enzyme 1 DYL72_16540 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DYL72_16540 PF01243 Pyridoxamine 5'-phosphate oxidase DYL72_16545 PF00529 HlyD membrane-fusion protein of T1SS DYL72_16560 PF00664 ABC transporter transmembrane region DYL72_16560 PF00005 ABC transporter DYL72_16560 PF03412 Peptidase C39 family DYL72_16570 PF13358 DDE superfamily endonuclease DYL72_16575 PF00072 Response regulator receiver domain DYL72_16575 PF00990 Diguanylate cyclase, GGDEF domain DYL72_16585 PF02743 Cache domain DYL72_16585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYL72_16585 PF00672 HAMP domain DYL72_16590 PF00072 Response regulator receiver domain DYL72_16590 PF01339 CheB methylesterase DYL72_16595 PF03975 CheD chemotactic sensory transduction DYL72_16600 PF03705 CheR methyltransferase, all-alpha domain DYL72_16600 PF01739 CheR methyltransferase, SAM binding domain DYL72_16605 PF02203 Tar ligand binding domain homologue DYL72_16605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYL72_16605 PF00672 HAMP domain DYL72_16610 PF01584 CheW-like domain DYL72_16615 PF01584 CheW-like domain DYL72_16620 PF09078 CheY binding DYL72_16620 PF02895 Signal transducing histidine kinase, homodimeric domain DYL72_16620 PF01584 CheW-like domain DYL72_16620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYL72_16620 PF01627 Hpt domain DYL72_16625 PF00486 Transcriptional regulatory protein, C terminal DYL72_16625 PF00072 Response regulator receiver domain DYL72_16635 PF13718 GNAT acetyltransferase 2 DYL72_16635 PF05127 Helicase DYL72_16640 PF13416 Bacterial extracellular solute-binding protein DYL72_16645 PF08775 ParB family DYL72_16645 PF02195 ParB-like nuclease domain DYL72_16650 PF18607 ParA helix turn helix domain DYL72_16650 PF13614 AAA domain DYL72_16675 PF01709 Transcriptional regulator DYL72_16680 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DYL72_16680 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DYL72_16685 PF03222 Tryptophan/tyrosine permease family DYL72_16715 PF03466 LysR substrate binding domain DYL72_16715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_16720 PF13460 NAD(P)H-binding DYL72_16730 PF03733 Inner membrane component domain DYL72_16750 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DYL72_16750 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DYL72_16755 PF00730 HhH-GPD superfamily base excision DNA repair protein DYL72_16755 PF06029 AlkA N-terminal domain DYL72_16760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_16760 PF03466 LysR substrate binding domain DYL72_16775 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DYL72_16785 PF01551 Peptidase family M23 DYL72_16785 PF04225 Opacity-associated protein A LysM-like domain DYL72_16790 PF02378 Phosphotransferase system, EIIC DYL72_16790 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DYL72_16790 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DYL72_16795 PF01232 Mannitol dehydrogenase Rossmann domain DYL72_16795 PF08125 Mannitol dehydrogenase C-terminal domain DYL72_16800 PF05068 Mannitol repressor DYL72_16805 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DYL72_16810 PF03600 Citrate transporter DYL72_16815 PF00375 Sodium:dicarboxylate symporter family DYL72_16820 PF07681 DoxX DYL72_16840 PF13533 Biotin-lipoyl like DYL72_16845 PF01047 MarR family DYL72_16850 PF04393 Protein of unknown function (DUF535) DYL72_16855 PF04244 Deoxyribodipyrimidine photo-lyase-related protein DYL72_16860 PF00581 Rhodanese-like domain DYL72_16870 PF00005 ABC transporter DYL72_16885 PF08402 TOBE domain DYL72_16885 PF00005 ABC transporter DYL72_16895 PF00528 Binding-protein-dependent transport system inner membrane component DYL72_16910 PF00392 Bacterial regulatory proteins, gntR family DYL72_16910 PF07702 UTRA domain DYL72_16915 PF00270 DEAD/DEAH box helicase DYL72_16915 PF00271 Helicase conserved C-terminal domain DYL72_16920 PF01042 Endoribonuclease L-PSP DYL72_16925 PF13419 Haloacid dehalogenase-like hydrolase DYL72_16935 PF04055 Radical SAM superfamily DYL72_16940 PF11230 Protein of unknown function (DUF3029) DYL72_16950 PF16884 N-terminal domain of oxidoreductase DYL72_16950 PF00107 Zinc-binding dehydrogenase DYL72_16955 PF00440 Bacterial regulatory proteins, tetR family DYL72_16955 PF16925 Tetracyclin repressor-like, C-terminal domain DYL72_16970 PF00486 Transcriptional regulatory protein, C terminal DYL72_16970 PF00072 Response regulator receiver domain DYL72_16980 PF00849 RNA pseudouridylate synthase DYL72_16985 PF13358 DDE superfamily endonuclease DYL72_16995 PF13358 DDE superfamily endonuclease DYL72_17035 PF13358 DDE superfamily endonuclease DYL72_17055 PF00004 ATPase family associated with various cellular activities (AAA) DYL72_17055 PF07724 AAA domain (Cdc48 subfamily) DYL72_17055 PF17871 AAA lid domain DYL72_17055 PF10431 C-terminal, D2-small domain, of ClpB protein DYL72_17085 PF16671 Actin cross-linking domain DYL72_17085 PF04717 Type VI secretion system, phage-baseplate injector DYL72_17130 PF13005 zinc-finger binding domain of transposase IS66 DYL72_17130 PF03050 Transposase IS66 family DYL72_17130 PF13817 IS66 C-terminal element DYL72_17130 PF13007 Transposase C of IS166 homeodomain DYL72_17155 PF00939 Sodium:sulfate symporter transmembrane region DYL72_17160 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) DYL72_17165 PF13358 DDE superfamily endonuclease DYL72_17170 PF00704 Glycosyl hydrolases family 18 DYL72_17170 PF08329 Chitinase A, N-terminal domain DYL72_17175 PF00392 Bacterial regulatory proteins, gntR family DYL72_17175 PF07702 UTRA domain DYL72_17180 PF00005 ABC transporter DYL72_17190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYL72_17190 PF00672 HAMP domain DYL72_17190 PF02743 Cache domain DYL72_17210 PF01569 PAP2 superfamily DYL72_17215 PF04286 Protein of unknown function (DUF445) DYL72_17220 PF00005 ABC transporter DYL72_17220 PF00664 ABC transporter transmembrane region DYL72_17230 PF03707 Bacterial signalling protein N terminal repeat DYL72_17230 PF00563 EAL domain DYL72_17230 PF00990 Diguanylate cyclase, GGDEF domain DYL72_17240 PF01261 Xylose isomerase-like TIM barrel DYL72_17245 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DYL72_17255 PF00596 Class II Aldolase and Adducin N-terminal domain DYL72_17260 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DYL72_17265 PF03611 PTS system sugar-specific permease component DYL72_17270 PF00455 DeoR C terminal sensor domain DYL72_17270 PF08220 DeoR-like helix-turn-helix domain DYL72_17280 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DYL72_17280 PF00128 Alpha amylase, catalytic domain DYL72_17285 PF02264 LamB porin DYL72_17300 PF13358 DDE superfamily endonuclease DYL72_17305 PF01547 Bacterial extracellular solute-binding protein DYL72_17310 PF03466 LysR substrate binding domain DYL72_17310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_17315 PF00128 Alpha amylase, catalytic domain DYL72_17315 PF16657 Maltogenic Amylase, C-terminal domain DYL72_17325 PF00375 Sodium:dicarboxylate symporter family DYL72_17335 PF02630 SCO1/SenC DYL72_17350 PF03616 Sodium/glutamate symporter DYL72_17355 PF07238 PilZ domain DYL72_17355 PF12945 Flagellar protein YcgR DYL72_17380 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DYL72_17380 PF00529 HlyD membrane-fusion protein of T1SS DYL72_17385 PF11742 Protein of unknown function (DUF3302) DYL72_17390 PF00990 Diguanylate cyclase, GGDEF domain DYL72_17405 PF01048 Phosphorylase superfamily DYL72_17410 PF08349 Protein of unknown function (DUF1722) DYL72_17415 PF13411 MerR HTH family regulatory protein DYL72_17420 PF03441 FAD binding domain of DNA photolyase DYL72_17420 PF00875 DNA photolyase DYL72_17425 PF03734 L,D-transpeptidase catalytic domain DYL72_17425 PF01476 LysM domain DYL72_17425 PF17969 L,D-transpeptidase C-terminal domain DYL72_17435 PF00270 DEAD/DEAH box helicase DYL72_17435 PF00271 Helicase conserved C-terminal domain DYL72_17440 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DYL72_17440 PF00326 Prolyl oligopeptidase family DYL72_17465 PF12262 Bacterial virulence factor lipase N-terminal DYL72_17470 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) DYL72_17475 PF00128 Alpha amylase, catalytic domain DYL72_17480 PF00248 Aldo/keto reductase family DYL72_17490 PF00005 ABC transporter DYL72_17490 PF02687 FtsX-like permease family DYL72_17490 PF12704 MacB-like periplasmic core domain DYL72_17495 PF00005 ABC transporter DYL72_17495 PF02687 FtsX-like permease family DYL72_17495 PF12704 MacB-like periplasmic core domain DYL72_17510 PF06580 Histidine kinase DYL72_17510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYL72_17515 PF04397 LytTr DNA-binding domain DYL72_17515 PF00072 Response regulator receiver domain DYL72_17520 PF00990 Diguanylate cyclase, GGDEF domain DYL72_17520 PF00360 Phytochrome region DYL72_17520 PF01590 GAF domain DYL72_17520 PF00563 EAL domain DYL72_17530 PF03605 Anaerobic c4-dicarboxylate membrane transporter DYL72_17540 PF00072 Response regulator receiver domain DYL72_17545 PF00512 His Kinase A (phospho-acceptor) domain DYL72_17545 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DYL72_17545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYL72_17545 PF01627 Hpt domain DYL72_17545 PF00072 Response regulator receiver domain DYL72_17545 PF00672 HAMP domain DYL72_17555 PF13520 Amino acid permease DYL72_17575 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DYL72_17575 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DYL72_17600 PF00873 AcrB/AcrD/AcrF family DYL72_17610 PF00356 Bacterial regulatory proteins, lacI family DYL72_17615 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DYL72_17625 PF03611 PTS system sugar-specific permease component DYL72_17630 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DYL72_17635 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DYL72_17640 PF02566 OsmC-like protein DYL72_17645 PF14602 Hexapeptide repeat of succinyl-transferase DYL72_17645 PF12464 Maltose acetyltransferase DYL72_17650 PF00892 EamA-like transporter family DYL72_17660 PF03466 LysR substrate binding domain DYL72_17660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_17670 PF03466 LysR substrate binding domain DYL72_17670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_17675 PF00501 AMP-binding enzyme DYL72_17675 PF13193 AMP-binding enzyme C-terminal domain DYL72_17680 PF00351 Biopterin-dependent aromatic amino acid hydroxylase DYL72_17685 PF01329 Pterin 4 alpha carbinolamine dehydratase DYL72_17690 PF12729 Four helix bundle sensory module for signal transduction DYL72_17690 PF00672 HAMP domain DYL72_17690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYL72_17695 PF01554 MatE DYL72_17700 PF12833 Helix-turn-helix domain DYL72_17700 PF02311 AraC-like ligand binding domain DYL72_17705 PF11849 Domain of unknown function (DUF3369) DYL72_17715 PF00497 Bacterial extracellular solute-binding proteins, family 3 DYL72_17715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYL72_17715 PF00512 His Kinase A (phospho-acceptor) domain DYL72_17730 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DYL72_17730 PF13542 Helix-turn-helix domain of transposase family ISL3 DYL72_17730 PF01610 Transposase DYL72_17755 PF01037 Lrp/AsnC ligand binding domain DYL72_17760 PF00657 GDSL-like Lipase/Acylhydrolase DYL72_17765 PF16458 Beta-prism lectin DYL72_17765 PF07968 Leukocidin/Hemolysin toxin family DYL72_17765 PF12563 Hemolytic toxin N terminal DYL72_17770 PF00561 alpha/beta hydrolase fold DYL72_17775 PF03280 Proteobacterial lipase chaperone protein DYL72_17780 PF00801 PKD domain DYL72_17780 PF05547 Immune inhibitor A peptidase M6 DYL72_17795 PF01752 Collagenase DYL72_17795 PF08453 Peptidase family M9 N-terminal DYL72_17795 PF04151 Bacterial pre-peptidase C-terminal domain DYL72_17805 PF01497 Periplasmic binding protein DYL72_17810 PF01032 FecCD transport family DYL72_17815 PF01032 FecCD transport family DYL72_17820 PF00005 ABC transporter DYL72_17825 PF00871 Acetokinase family DYL72_17835 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DYL72_17840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_17840 PF03466 LysR substrate binding domain DYL72_17845 PF07690 Major Facilitator Superfamily DYL72_17850 PF00144 Beta-lactamase DYL72_17855 PF03466 LysR substrate binding domain DYL72_17855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_17860 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DYL72_17860 PF01610 Transposase DYL72_17860 PF13542 Helix-turn-helix domain of transposase family ISL3 DYL72_17865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYL72_17865 PF00672 HAMP domain DYL72_17870 PF03741 Integral membrane protein TerC family DYL72_17885 PF00892 EamA-like transporter family DYL72_17910 PF02347 Glycine cleavage system P-protein DYL72_17920 PF00464 Serine hydroxymethyltransferase DYL72_17930 PF01571 Aminomethyltransferase folate-binding domain DYL72_17930 PF08669 Glycine cleavage T-protein C-terminal barrel domain DYL72_17945 PF05193 Peptidase M16 inactive domain DYL72_17945 PF00675 Insulinase (Peptidase family M16) DYL72_17960 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DYL72_17960 PF02378 Phosphotransferase system, EIIC DYL72_17965 PF00294 pfkB family carbohydrate kinase DYL72_17970 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DYL72_17970 PF00381 PTS HPr component phosphorylation site DYL72_17975 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DYL72_17975 PF00356 Bacterial regulatory proteins, lacI family DYL72_17980 PF00149 Calcineurin-like phosphoesterase DYL72_17980 PF12320 Type 5 capsule protein repressor C-terminal domain DYL72_17985 PF13476 AAA domain DYL72_17990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYL72_17990 PF00072 Response regulator receiver domain DYL72_17995 PF00155 Aminotransferase class I and II DYL72_18005 PF00654 Voltage gated chloride channel DYL72_18010 PF07683 Cobalamin synthesis protein cobW C-terminal domain DYL72_18010 PF02492 CobW/HypB/UreG, nucleotide-binding domain DYL72_18015 PF00005 ABC transporter DYL72_18020 PF00005 ABC transporter DYL72_18020 PF12704 MacB-like periplasmic core domain DYL72_18020 PF02687 FtsX-like permease family DYL72_18025 PF12704 MacB-like periplasmic core domain DYL72_18025 PF02687 FtsX-like permease family DYL72_18025 PF00005 ABC transporter DYL72_18040 PF01926 50S ribosome-binding GTPase DYL72_18060 PF13358 DDE superfamily endonuclease DYL72_18100 PF03608 PTS system enzyme II sorbitol-specific factor DYL72_18105 PF03612 Sorbitol phosphotransferase enzyme II N-terminus DYL72_18105 PF07663 Sorbitol phosphotransferase enzyme II C-terminus DYL72_18110 PF03829 PTS system glucitol/sorbitol-specific IIA component DYL72_18115 PF00106 short chain dehydrogenase DYL72_18120 PF06923 Glucitol operon activator protein (GutM) DYL72_18125 PF08220 DeoR-like helix-turn-helix domain DYL72_18125 PF00455 DeoR C terminal sensor domain DYL72_18130 PF03608 PTS system enzyme II sorbitol-specific factor DYL72_18135 PF03612 Sorbitol phosphotransferase enzyme II N-terminus DYL72_18135 PF07663 Sorbitol phosphotransferase enzyme II C-terminus DYL72_18140 PF03829 PTS system glucitol/sorbitol-specific IIA component DYL72_18155 PF07549 SecD/SecF GG Motif DYL72_18155 PF13721 SecD export protein N-terminal TM region DYL72_18155 PF02355 Protein export membrane protein DYL72_18160 PF02355 Protein export membrane protein DYL72_18160 PF07549 SecD/SecF GG Motif DYL72_18170 PF03264 NapC/NirT cytochrome c family, N-terminal region DYL72_18175 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) DYL72_18180 PF01568 Molydopterin dinucleotide binding domain DYL72_18180 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DYL72_18180 PF00384 Molybdopterin oxidoreductase DYL72_18190 PF12838 4Fe-4S dicluster domain DYL72_18190 PF13187 4Fe-4S dicluster domain DYL72_18195 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term DYL72_18195 PF00672 HAMP domain DYL72_18195 PF07730 Histidine kinase DYL72_18195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYL72_18200 PF00072 Response regulator receiver domain DYL72_18200 PF00196 Bacterial regulatory proteins, luxR family DYL72_18205 PF03606 C4-dicarboxylate anaerobic carrier DYL72_18230 PF12849 PBP superfamily domain DYL72_18240 PF00575 S1 RNA binding domain DYL72_18240 PF00773 RNB domain DYL72_18240 PF08206 Ribonuclease B OB domain DYL72_18245 PF00271 Helicase conserved C-terminal domain DYL72_18245 PF00270 DEAD/DEAH box helicase DYL72_18245 PF03880 DbpA RNA binding domain DYL72_18290 PF13276 HTH-like domain DYL72_18290 PF00665 Integrase core domain DYL72_18290 PF13333 Integrase core domain DYL72_18295 PF13333 Integrase core domain DYL72_18295 PF13276 HTH-like domain DYL72_18295 PF00665 Integrase core domain DYL72_18335 PF05360 yiaA/B two helix domain DYL72_18350 PF03129 Anticodon binding domain DYL72_18350 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DYL72_18350 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DYL72_18350 PF02824 TGS domain DYL72_18355 PF00707 Translation initiation factor IF-3, C-terminal domain DYL72_18355 PF05198 Translation initiation factor IF-3, N-terminal domain DYL72_18360 PF01632 Ribosomal protein L35 DYL72_18365 PF00453 Ribosomal protein L20 DYL72_18370 PF00589 Phage integrase family DYL72_18370 PF13495 Phage integrase, N-terminal SAM-like domain DYL72_18385 PF13005 zinc-finger binding domain of transposase IS66 DYL72_18385 PF13007 Transposase C of IS166 homeodomain DYL72_18385 PF03050 Transposase IS66 family DYL72_18385 PF13817 IS66 C-terminal element DYL72_18540 PF03050 Transposase IS66 family DYL72_18540 PF13817 IS66 C-terminal element DYL72_18540 PF13005 zinc-finger binding domain of transposase IS66 DYL72_18540 PF13007 Transposase C of IS166 homeodomain DYL72_18565 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH DYL72_18580 PF01327 Polypeptide deformylase DYL72_18655 PF13302 Acetyltransferase (GNAT) domain DYL72_18670 PF13005 zinc-finger binding domain of transposase IS66 DYL72_18670 PF03050 Transposase IS66 family DYL72_18670 PF13007 Transposase C of IS166 homeodomain DYL72_18670 PF13817 IS66 C-terminal element DYL72_18750 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB DYL72_18755 PF01381 Helix-turn-helix DYL72_18765 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DYL72_18800 PF13007 Transposase C of IS166 homeodomain DYL72_18800 PF03050 Transposase IS66 family DYL72_18800 PF13005 zinc-finger binding domain of transposase IS66 DYL72_18800 PF13817 IS66 C-terminal element DYL72_18805 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system DYL72_18810 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system DYL72_18885 PF03050 Transposase IS66 family DYL72_18885 PF13817 IS66 C-terminal element DYL72_18885 PF13007 Transposase C of IS166 homeodomain DYL72_18885 PF13005 zinc-finger binding domain of transposase IS66 DYL72_18900 PF13005 zinc-finger binding domain of transposase IS66 DYL72_18900 PF13007 Transposase C of IS166 homeodomain DYL72_18900 PF13817 IS66 C-terminal element DYL72_18900 PF03050 Transposase IS66 family DYL72_18935 PF13597 Anaerobic ribonucleoside-triphosphate reductase DYL72_18935 PF03477 ATP cone domain DYL72_18940 PF03477 ATP cone domain DYL72_18940 PF13597 Anaerobic ribonucleoside-triphosphate reductase DYL72_18960 PF13817 IS66 C-terminal element DYL72_18960 PF03050 Transposase IS66 family DYL72_18960 PF13007 Transposase C of IS166 homeodomain DYL72_18960 PF13005 zinc-finger binding domain of transposase IS66 DYL72_18980 PF13302 Acetyltransferase (GNAT) domain DYL72_19050 PF13005 zinc-finger binding domain of transposase IS66 DYL72_19050 PF03050 Transposase IS66 family DYL72_19050 PF13817 IS66 C-terminal element DYL72_19050 PF13007 Transposase C of IS166 homeodomain DYL72_19120 PF13358 DDE superfamily endonuclease DYL72_19190 PF13005 zinc-finger binding domain of transposase IS66 DYL72_19190 PF13007 Transposase C of IS166 homeodomain DYL72_19190 PF13817 IS66 C-terminal element DYL72_19190 PF03050 Transposase IS66 family DYL72_19230 PF08212 Lipocalin-like domain DYL72_19270 PF00155 Aminotransferase class I and II DYL72_19275 PF08443 RimK-like ATP-grasp domain DYL72_19275 PF18030 RimK PreATP-grasp domain DYL72_19290 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DYL72_19295 PF00528 Binding-protein-dependent transport system inner membrane component DYL72_19300 PF12911 N-terminal TM domain of oligopeptide transport permease C DYL72_19300 PF00528 Binding-protein-dependent transport system inner membrane component DYL72_19305 PF00005 ABC transporter DYL72_19305 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DYL72_19310 PF00360 Phytochrome region DYL72_19310 PF00990 Diguanylate cyclase, GGDEF domain DYL72_19310 PF01590 GAF domain DYL72_19310 PF00563 EAL domain DYL72_19325 PF01292 Prokaryotic cytochrome b561 DYL72_19330 PF04264 YceI-like domain DYL72_19335 PF00672 HAMP domain DYL72_19335 PF12729 Four helix bundle sensory module for signal transduction DYL72_19335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYL72_19340 PF13358 DDE superfamily endonuclease DYL72_19345 PF13419 Haloacid dehalogenase-like hydrolase DYL72_19350 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DYL72_19350 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DYL72_19365 PF00456 Transketolase, thiamine diphosphate binding domain DYL72_19365 PF02779 Transketolase, pyrimidine binding domain DYL72_19365 PF02780 Transketolase, C-terminal domain DYL72_19370 PF00923 Transaldolase/Fructose-6-phosphate aldolase DYL72_19385 PF00581 Rhodanese-like domain DYL72_19390 PF00899 ThiF family DYL72_19395 PF00994 Probable molybdopterin binding domain DYL72_19395 PF03454 MoeA C-terminal region (domain IV) DYL72_19395 PF03453 MoeA N-terminal region (domain I and II) DYL72_19400 PF01227 GTP cyclohydrolase I DYL72_19405 PF01641 SelR domain DYL72_19405 PF01625 Peptide methionine sulfoxide reductase DYL72_19410 PF01268 Formate--tetrahydrofolate ligase DYL72_19415 PF00588 SpoU rRNA Methylase family DYL72_19415 PF08032 RNA 2'-O ribose methyltransferase substrate binding DYL72_19420 PF11953 Domain of unknown function (DUF3470) DYL72_19420 PF00037 4Fe-4S binding domain DYL72_19435 PF13419 Haloacid dehalogenase-like hydrolase DYL72_19440 PF01272 Transcription elongation factor, GreA/GreB, C-term DYL72_19440 PF14760 Rnk N-terminus DYL72_19445 PF00392 Bacterial regulatory proteins, gntR family DYL72_19445 PF07702 UTRA domain DYL72_19455 PF00854 POT family DYL72_19465 PF01226 Formate/nitrite transporter DYL72_19470 PF03466 LysR substrate binding domain DYL72_19470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_19475 PF06496 Protein of unknown function (DUF1097) DYL72_19480 PF11398 Protein of unknown function (DUF2813) DYL72_19485 PF00149 Calcineurin-like phosphoesterase DYL72_19485 PF02872 5'-nucleotidase, C-terminal domain DYL72_19490 PF03741 Integral membrane protein TerC family DYL72_19495 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DYL72_19495 PF13542 Helix-turn-helix domain of transposase family ISL3 DYL72_19495 PF01610 Transposase DYL72_19505 PF03831 PhnA domain DYL72_19505 PF08274 PhnA Zinc-Ribbon DYL72_19515 PF03061 Thioesterase superfamily DYL72_19525 PF12793 Sugar transport-related sRNA regulator N-term DYL72_19525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DYL72_19530 PF00005 ABC transporter DYL72_19530 PF12848 ABC transporter DYL72_19550 PF00043 Glutathione S-transferase, C-terminal domain DYL72_19550 PF02798 Glutathione S-transferase, N-terminal domain DYL72_19560 PF00872 Transposase, Mutator family DYL72_19575 PF17200 Single Cache domain 2 DYL72_19575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYL72_19575 PF00672 HAMP domain DYL72_19585 PF00313 'Cold-shock' DNA-binding domain DYL72_19595 PF13358 DDE superfamily endonuclease DYL72_19615 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DYL72_19615 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DYL72_19615 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DYL72_19620 PF02233 NAD(P) transhydrogenase beta subunit DYL72_19630 PF00486 Transcriptional regulatory protein, C terminal DYL72_19630 PF00072 Response regulator receiver domain DYL72_19645 PF03701 Uncharacterised protein family (UPF0181) DYL72_19670 PF13005 zinc-finger binding domain of transposase IS66 DYL72_19670 PF13007 Transposase C of IS166 homeodomain DYL72_19670 PF13817 IS66 C-terminal element DYL72_19670 PF03050 Transposase IS66 family DYL72_19705 PF13817 IS66 C-terminal element DYL72_19705 PF03050 Transposase IS66 family DYL72_19705 PF13005 zinc-finger binding domain of transposase IS66 DYL72_19705 PF13007 Transposase C of IS166 homeodomain DYL72_19725 PF01610 Transposase DYL72_19725 PF13542 Helix-turn-helix domain of transposase family ISL3 DYL72_19725 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DYL72_19735 PF03466 LysR substrate binding domain DYL72_19735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_19740 PF13380 CoA binding domain DYL72_19740 PF00583 Acetyltransferase (GNAT) family DYL72_19740 PF13607 Succinyl-CoA ligase like flavodoxin domain DYL72_19750 PF07478 D-ala D-ala ligase C-terminus DYL72_19750 PF01820 D-ala D-ala ligase N-terminus DYL72_19765 PF01253 Translation initiation factor SUI1 DYL72_19870 PF13358 DDE superfamily endonuclease DYL72_19900 PF13005 zinc-finger binding domain of transposase IS66 DYL72_19900 PF13007 Transposase C of IS166 homeodomain DYL72_19900 PF03050 Transposase IS66 family DYL72_19900 PF13817 IS66 C-terminal element DYL72_19950 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DYL72_19965 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ DYL72_19985 PF13005 zinc-finger binding domain of transposase IS66 DYL72_19985 PF13817 IS66 C-terminal element DYL72_19985 PF13007 Transposase C of IS166 homeodomain DYL72_19985 PF03050 Transposase IS66 family DYL72_19995 PF13005 zinc-finger binding domain of transposase IS66 DYL72_19995 PF13007 Transposase C of IS166 homeodomain DYL72_19995 PF13817 IS66 C-terminal element DYL72_19995 PF03050 Transposase IS66 family DYL72_20015 PF00158 Sigma-54 interaction domain DYL72_20015 PF00072 Response regulator receiver domain DYL72_20015 PF02954 Bacterial regulatory protein, Fis family DYL72_20020 PF00563 EAL domain DYL72_20020 PF00990 Diguanylate cyclase, GGDEF domain DYL72_20020 PF13188 PAS domain DYL72_20020 PF03707 Bacterial signalling protein N terminal repeat DYL72_20030 PF13188 PAS domain DYL72_20030 PF13426 PAS domain DYL72_20030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYL72_20030 PF00512 His Kinase A (phospho-acceptor) domain DYL72_20030 PF00989 PAS fold DYL72_20040 PF00072 Response regulator receiver domain DYL72_20055 PF00563 EAL domain DYL72_20055 PF00360 Phytochrome region DYL72_20055 PF00990 Diguanylate cyclase, GGDEF domain DYL72_20055 PF01590 GAF domain DYL72_20065 PF03459 TOBE domain DYL72_20065 PF00005 ABC transporter DYL72_20070 PF00528 Binding-protein-dependent transport system inner membrane component DYL72_20080 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DYL72_20080 PF07685 CobB/CobQ-like glutamine amidotransferase domain DYL72_20085 PF04076 Bacterial OB fold (BOF) protein DYL72_20095 PF08447 PAS fold DYL72_20095 PF13426 PAS domain DYL72_20095 PF00563 EAL domain DYL72_20095 PF00990 Diguanylate cyclase, GGDEF domain DYL72_20095 PF05231 MASE1 DYL72_20095 PF08448 PAS fold DYL72_20100 PF00483 Nucleotidyl transferase DYL72_20105 PF00704 Glycosyl hydrolases family 18 DYL72_20105 PF06483 Chitinase C DYL72_20110 PF12833 Helix-turn-helix domain DYL72_20110 PF06719 AraC-type transcriptional regulator N-terminus DYL72_20115 PF00465 Iron-containing alcohol dehydrogenase DYL72_20120 PF02954 Bacterial regulatory protein, Fis family DYL72_20120 PF00072 Response regulator receiver domain DYL72_20120 PF14532 Sigma-54 interaction domain DYL72_20125 PF00512 His Kinase A (phospho-acceptor) domain DYL72_20125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYL72_20125 PF00672 HAMP domain DYL72_20140 PF07690 Major Facilitator Superfamily DYL72_20145 PF02887 Pyruvate kinase, alpha/beta domain DYL72_20145 PF00224 Pyruvate kinase, barrel domain DYL72_20150 PF00672 HAMP domain DYL72_20150 PF00072 Response regulator receiver domain DYL72_20150 PF01627 Hpt domain DYL72_20150 PF00512 His Kinase A (phospho-acceptor) domain DYL72_20150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYL72_20155 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DYL72_20160 PF02142 MGS-like domain DYL72_20165 PF13361 UvrD-like helicase C-terminal domain DYL72_20165 PF00580 UvrD/REP helicase N-terminal domain DYL72_20165 PF12462 DNA helicase IV / RNA helicase N terminal DYL72_20170 PF12805 FUSC-like inner membrane protein yccS DYL72_20190 PF01266 FAD dependent oxidoreductase DYL72_20190 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DYL72_20200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYL72_20200 PF00512 His Kinase A (phospho-acceptor) domain DYL72_20200 PF00072 Response regulator receiver domain DYL72_20200 PF09308 LuxQ, periplasmic DYL72_20205 PF13407 Periplasmic binding protein domain DYL72_20215 PF01541 GIY-YIG catalytic domain DYL72_20230 PF04363 Protein of unknown function (DUF496) DYL72_20240 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DYL72_20240 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DYL72_20245 PF00230 Major intrinsic protein DYL72_20250 PF04324 BFD-like [2Fe-2S] binding domain DYL72_20250 PF01266 FAD dependent oxidoreductase DYL72_20255 PF00890 FAD binding domain DYL72_20260 PF02754 Cysteine-rich domain DYL72_20260 PF13183 4Fe-4S dicluster domain DYL72_20265 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DYL72_20265 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DYL72_20270 PF00085 Thioredoxin DYL72_20275 PF02810 SEC-C motif DYL72_20275 PF07517 SecA DEAD-like domain DYL72_20275 PF01043 SecA preprotein cross-linking domain DYL72_20275 PF07516 SecA Wing and Scaffold domain DYL72_20290 PF13005 zinc-finger binding domain of transposase IS66 DYL72_20290 PF13817 IS66 C-terminal element DYL72_20290 PF13007 Transposase C of IS166 homeodomain DYL72_20290 PF03050 Transposase IS66 family DYL72_20315 PF00085 Thioredoxin DYL72_20320 PF07690 Major Facilitator Superfamily DYL72_20325 PF11756 Nitrous oxide-stimulated promoter DYL72_20335 PF01513 ATP-NAD kinase DYL72_20340 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DYL72_20340 PF14824 Sirohaem biosynthesis protein central DYL72_20340 PF10414 Sirohaem synthase dimerisation region DYL72_20350 PF13806 Rieske-like [2Fe-2S] domain DYL72_20355 PF18267 Rubredoxin NAD+ reductase C-terminal domain DYL72_20355 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYL72_20355 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DYL72_20355 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DYL72_20355 PF04324 BFD-like [2Fe-2S] binding domain DYL72_20360 PF00872 Transposase, Mutator family DYL72_20390 PF05762 VWA domain containing CoxE-like protein DYL72_20395 PF07728 AAA domain (dynein-related subfamily) DYL72_20395 PF17868 AAA lid domain DYL72_20395 PF12592 Protein of unknown function (DUF3763) DYL72_20405 PF01212 Beta-eliminating lyase DYL72_20415 PF00270 DEAD/DEAH box helicase DYL72_20415 PF00271 Helicase conserved C-terminal domain DYL72_20420 PF03222 Tryptophan/tyrosine permease family DYL72_20425 PF00672 HAMP domain DYL72_20425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYL72_20430 PF16363 GDP-mannose 4,6 dehydratase DYL72_20435 PF03746 LamB/YcsF family DYL72_20445 PF02626 Carboxyltransferase domain, subdomain A and B DYL72_20460 PF00005 ABC transporter DYL72_20465 PF13472 GDSL-like Lipase/Acylhydrolase family DYL72_20470 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase DYL72_20470 PF12241 Trans-2-enoyl-CoA reductase catalytic region DYL72_20470 PF07055 Enoyl reductase FAD binding domain DYL72_20475 PF00498 FHA domain DYL72_20475 PF00990 Diguanylate cyclase, GGDEF domain DYL72_20475 PF00563 EAL domain DYL72_20485 PF00226 DnaJ domain DYL72_20485 PF01556 DnaJ C terminal domain DYL72_20485 PF00684 DnaJ central domain DYL72_20505 PF13419 Haloacid dehalogenase-like hydrolase DYL72_20520 PF00294 pfkB family carbohydrate kinase DYL72_20530 PF00194 Eukaryotic-type carbonic anhydrase DYL72_20540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYL72_20540 PF00672 HAMP domain DYL72_20540 PF02743 Cache domain DYL72_20545 PF00491 Arginase family DYL72_20550 PF17944 Arginine decarboxylase C-terminal helical extension DYL72_20550 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DYL72_20550 PF17810 Arginine decarboxylase helical bundle domain DYL72_20560 PF00005 ABC transporter DYL72_20560 PF00571 CBS domain DYL72_20565 PF00528 Binding-protein-dependent transport system inner membrane component DYL72_20570 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DYL72_20575 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DYL72_20590 PF00571 CBS domain DYL72_20590 PF03448 MgtE intracellular N domain DYL72_20590 PF01769 Divalent cation transporter DYL72_20595 PF13840 ACT domain DYL72_20595 PF00696 Amino acid kinase family DYL72_20600 PF06339 Ectoine synthase DYL72_20605 PF00202 Aminotransferase class-III DYL72_20610 PF00583 Acetyltransferase (GNAT) family DYL72_20620 PF01467 Cytidylyltransferase-like DYL72_20625 PF02540 NAD synthase DYL72_20655 PF13358 DDE superfamily endonuclease DYL72_20660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYL72_20660 PF00672 HAMP domain DYL72_20660 PF02743 Cache domain DYL72_20665 PF00128 Alpha amylase, catalytic domain DYL72_20685 PF17863 AAA lid domain DYL72_20685 PF07726 ATPase family associated with various cellular activities (AAA) DYL72_20720 PF00990 Diguanylate cyclase, GGDEF domain DYL72_20730 PF01844 HNH endonuclease DYL72_20735 PF12843 Putative quorum-sensing-regulated virulence factor DYL72_20740 PF00884 Sulfatase DYL72_20750 PF01219 Prokaryotic diacylglycerol kinase DYL72_20760 PF13737 Transposase DDE domain DYL72_20790 PF00107 Zinc-binding dehydrogenase DYL72_20790 PF08240 Alcohol dehydrogenase GroES-like domain DYL72_20795 PF00155 Aminotransferase class I and II DYL72_20800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_20800 PF03466 LysR substrate binding domain DYL72_20805 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DYL72_20815 PF07690 Major Facilitator Superfamily DYL72_20820 PF00196 Bacterial regulatory proteins, luxR family DYL72_20820 PF00072 Response regulator receiver domain DYL72_20825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYL72_20825 PF07730 Histidine kinase DYL72_20825 PF05231 MASE1 DYL72_20830 PF07690 Major Facilitator Superfamily DYL72_20845 PF11871 Domain of unknown function (DUF3391) DYL72_20845 PF01966 HD domain DYL72_20850 PF04013 Putative SAM-dependent RNA methyltransferase DYL72_20865 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DYL72_20865 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DYL72_20870 PF01022 Bacterial regulatory protein, arsR family DYL72_20875 PF01758 Sodium Bile acid symporter family DYL72_20880 PF01022 Bacterial regulatory protein, arsR family DYL72_20885 PF01740 STAS domain DYL72_20885 PF00916 Sulfate permease family DYL72_20890 PF00582 Universal stress protein family DYL72_20895 PF17327 Acyl homoserine lactone synthase DYL72_20900 PF00072 Response regulator receiver domain DYL72_20900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYL72_20910 PF12833 Helix-turn-helix domain DYL72_20915 PF02311 AraC-like ligand binding domain DYL72_20915 PF12833 Helix-turn-helix domain DYL72_20920 PF07715 TonB-dependent Receptor Plug Domain DYL72_20920 PF00593 TonB dependent receptor DYL72_20925 PF07690 Major Facilitator Superfamily DYL72_20930 PF00550 Phosphopantetheine attachment site DYL72_20930 PF00668 Condensation domain DYL72_20930 PF00501 AMP-binding enzyme DYL72_20930 PF08242 Methyltransferase domain DYL72_20935 PF13193 AMP-binding enzyme C-terminal domain DYL72_20935 PF00550 Phosphopantetheine attachment site DYL72_20935 PF00501 AMP-binding enzyme DYL72_20935 PF00668 Condensation domain DYL72_20950 PF00425 chorismate binding enzyme DYL72_20955 PF13193 AMP-binding enzyme C-terminal domain DYL72_20955 PF00501 AMP-binding enzyme DYL72_20960 PF00664 ABC transporter transmembrane region DYL72_20960 PF00005 ABC transporter DYL72_20965 PF00664 ABC transporter transmembrane region DYL72_20965 PF00005 ABC transporter DYL72_21040 PF13358 DDE superfamily endonuclease DYL72_21050 PF01420 Type I restriction modification DNA specificity domain DYL72_21055 PF12161 HsdM N-terminal domain DYL72_21055 PF02384 N-6 DNA Methylase DYL72_21065 PF02954 Bacterial regulatory protein, Fis family DYL72_21065 PF00072 Response regulator receiver domain DYL72_21065 PF00158 Sigma-54 interaction domain DYL72_21115 PF04717 Type VI secretion system, phage-baseplate injector DYL72_21115 PF16671 Actin cross-linking domain DYL72_21120 PF05638 Type VI secretion system effector, Hcp DYL72_21140 PF13737 Transposase DDE domain DYL72_21165 PF00478 IMP dehydrogenase / GMP reductase domain DYL72_21170 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DYL72_21170 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DYL72_21195 PF00313 'Cold-shock' DNA-binding domain DYL72_21200 PF07152 YaeQ protein DYL72_21205 PF00175 Oxidoreductase NAD-binding domain DYL72_21205 PF00042 Globin DYL72_21205 PF00970 Oxidoreductase FAD-binding domain DYL72_21210 PF00158 Sigma-54 interaction domain DYL72_21210 PF01590 GAF domain DYL72_21230 PF07670 Nucleoside recognition DYL72_21230 PF07662 Na+ dependent nucleoside transporter C-terminus DYL72_21230 PF01773 Na+ dependent nucleoside transporter N-terminus DYL72_21235 PF03473 MOSC domain DYL72_21235 PF00111 2Fe-2S iron-sulfur cluster binding domain DYL72_21235 PF03476 MOSC N-terminal beta barrel domain DYL72_21245 PF05958 tRNA (Uracil-5-)-methyltransferase DYL72_21250 PF05661 Protein of unknown function (DUF808) DYL72_21275 PF17151 Periplasmic sensor domain DYL72_21275 PF00990 Diguanylate cyclase, GGDEF domain DYL72_21280 PF00455 DeoR C terminal sensor domain DYL72_21280 PF08220 DeoR-like helix-turn-helix domain DYL72_21285 PF03472 Autoinducer binding domain DYL72_21285 PF00196 Bacterial regulatory proteins, luxR family DYL72_21290 PF00765 Autoinducer synthase DYL72_21305 PF00528 Binding-protein-dependent transport system inner membrane component DYL72_21310 PF14785 Maltose transport system permease protein MalF P2 domain DYL72_21310 PF00528 Binding-protein-dependent transport system inner membrane component DYL72_21315 PF01547 Bacterial extracellular solute-binding protein DYL72_21325 PF00005 ABC transporter DYL72_21325 PF08402 TOBE domain DYL72_21330 PF00196 Bacterial regulatory proteins, luxR family DYL72_21340 PF13358 DDE superfamily endonuclease DYL72_21345 PF01584 CheW-like domain DYL72_21345 PF00072 Response regulator receiver domain DYL72_21350 PF04237 YjbR DYL72_21355 PF13358 DDE superfamily endonuclease DYL72_21360 PF00990 Diguanylate cyclase, GGDEF domain DYL72_21375 PF00990 Diguanylate cyclase, GGDEF domain DYL72_21375 PF03707 Bacterial signalling protein N terminal repeat DYL72_21375 PF00563 EAL domain DYL72_21395 PF00990 Diguanylate cyclase, GGDEF domain DYL72_21395 PF00563 EAL domain DYL72_21405 PF02678 Pirin DYL72_21405 PF05726 Pirin C-terminal cupin domain DYL72_21425 PF00793 DAHP synthetase I family DYL72_21430 PF00005 ABC transporter DYL72_21435 PF00528 Binding-protein-dependent transport system inner membrane component DYL72_21440 PF00497 Bacterial extracellular solute-binding proteins, family 3 DYL72_21445 PF00528 Binding-protein-dependent transport system inner membrane component DYL72_21450 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DYL72_21450 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DYL72_21450 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DYL72_21450 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DYL72_21470 PF01557 Fumarylacetoacetate (FAA) hydrolase family DYL72_21485 PF00462 Glutaredoxin DYL72_21495 PF07690 Major Facilitator Superfamily DYL72_21500 PF03466 LysR substrate binding domain DYL72_21500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYL72_21550 PF07015 VirC1 protein DYL72_21620 PF02796 Helix-turn-helix domain of resolvase DYL72_21620 PF00239 Resolvase, N terminal domain DYL72_21650 PF07015 VirC1 protein DYL72_21735 PF02796 Helix-turn-helix domain of resolvase DYL72_21735 PF00239 Resolvase, N terminal domain DYL72_21765 PF07015 VirC1 protein DYL72_21850 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DYL72_21850 PF07685 CobB/CobQ-like glutamine amidotransferase domain