locus-tag	class	description
DYL72_00025	COG2433	Pfam Transposase IS66
DYL72_00080	COG2433	Pfam Transposase IS66
DYL72_00115	COG3842	ATPase activity
DYL72_00120	COG1176	ABC-type spermidine putrescine transport system, permease component I
DYL72_00125	COG1177	transmembrane transport
DYL72_00130	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
DYL72_00135	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
DYL72_00140	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
DYL72_00145	COG0004	ammonium transporteR
DYL72_00150	COG0488	(ABC) transporter
DYL72_00165	COG2271	Major facilitator Superfamily
DYL72_00170	COG1840	ABC-type Fe3 transport system, periplasmic component
DYL72_00180	COG3842	ATPase activity
DYL72_00185	COG0746	molybdenum cofactor guanylyltransferase activity
DYL72_00190	COG1763	Mo-molybdopterin cofactor biosynthetic process
DYL72_00215	COG0840	transmembrane signaling receptor activity
DYL72_00220	COG0791	NLP P60 protein
DYL72_00245	COG1793	dna ligase
DYL72_00250	COG4667	esterase of the alpha-beta hydrolase superfamily
DYL72_00265	COG0848	biopolymer transport protein
DYL72_00270	COG0811	peptide transport
DYL72_00275	COG0811	peptide transport
DYL72_00305	COG0625	glutathione transferase activity
DYL72_00315	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
DYL72_00330	COG1115	amino acid carrier protein
DYL72_00335	COG1280	lysine exporter protein (LysE YggA)
DYL72_00340	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
DYL72_00345	COG0477	Major facilitator Superfamily
DYL72_00360	COG1643	Atp-dependent helicase
DYL72_00380	COG3706	GGDEF domain
DYL72_00395	COG0443	Heat shock 70 kDa protein
DYL72_00425	COG1609	Transcriptional regulator
DYL72_00430	COG2723	6-phospho-beta-galactosidase activity
DYL72_00435	COG0513	Belongs to the DEAD box helicase family
DYL72_00440	COG0243	molybdopterin cofactor binding
DYL72_00445	COG3005	denitrification pathway
DYL72_00450	COG1278	Cold shock
DYL72_00465	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DYL72_00465	COG4191	Histidine kinase
DYL72_00490	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
DYL72_00500	COG3706	GGDEF domain
DYL72_00510	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DYL72_00520	COG3768	UPF0283 membrane protein
DYL72_00525	COG3106	COG3106 Predicted ATPase
DYL72_00540	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
DYL72_00545	COG0494	nUDIX hydrolase
DYL72_00555	COG0814	amino acid
DYL72_00560	COG1760	l-serine dehydratase
DYL72_00570	COG2356	endonuclease I
DYL72_00575	COG0720	synthase
DYL72_00580	COG0840	transmembrane signaling receptor activity
DYL72_00585	COG0017	Asparaginyl-tRNA synthetase
DYL72_00595	COG2201	protein-glutamate methylesterase activity
DYL72_00600	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
DYL72_00605	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
DYL72_00610	COG0835	chemotaxis
DYL72_00620	COG2198	Histidine kinase
DYL72_00620	COG0643	Histidine kinase
DYL72_00630	COG0745	RESPONSE REGULATOR receiver
DYL72_00635	COG0840	transmembrane signaling receptor activity
DYL72_00640	COG3437	response regulator, receiver
DYL72_00640	COG2770	Histidine kinase
DYL72_00645	COG1448	Aminotransferase
DYL72_00650	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
DYL72_00665	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DYL72_00670	COG1846	Transcriptional regulator
DYL72_00685	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DYL72_00690	COG3108	Peptidase M15
DYL72_00695	COG2989	Protein conserved in bacteria
DYL72_00725	COG1940	carbohydrate kinase activity
DYL72_00735	COG0748	coenzyme F420 binding
DYL72_00740	COG3721	Heme iron utilization protein
DYL72_00745	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
DYL72_00750	COG0811	peptide transport
DYL72_00755	COG0848	biopolymer transport protein
DYL72_00765	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DYL72_00770	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
DYL72_00785	COG0840	transmembrane signaling receptor activity
DYL72_00790	COG1621	beta-fructofuranosidase activity
DYL72_00800	COG1263	PTS System
DYL72_00800	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DYL72_00805	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DYL72_00810	COG2200	EAL domain
DYL72_00815	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
DYL72_00820	COG3335	DDE superfamily endonuclease
DYL72_00880	COG3064	Membrane
DYL72_00880	COG4991	sh3 domain protein
DYL72_00880	COG0515	serine threonine protein kinase
DYL72_00905	COG1716	ATPase activity
DYL72_00925	COG1181	Belongs to the D-alanine--D-alanine ligase family
DYL72_00975	COG3501	Rhs element vgr protein
DYL72_01000	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
DYL72_01025	COG0745	RESPONSE REGULATOR receiver
DYL72_01025	COG3706	GGDEF domain
DYL72_01045	COG0835	chemotaxis
DYL72_01045	COG0784	Response regulator, receiver
DYL72_01055	COG4565	transcriptional regulatory protein
DYL72_01060	COG3290	protein histidine kinase activity
DYL72_01075	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DYL72_01100	COG3063	Type IV pilus biogenesis stability protein PilW
DYL72_01115	COG1451	nucleotide metabolic process
DYL72_01125	COG0583	DNA-binding transcription factor activity
DYL72_01150	COG4139	cobalamin transport
DYL72_01155	COG2988	succinylglutamate desuccinylase activity
DYL72_01170	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
DYL72_01180	COG1073	alpha beta
DYL72_01180	COG3064	Membrane
DYL72_01180	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
DYL72_01185	COG2994	toxin metabolic process
DYL72_01215	COG0702	epimerase
DYL72_01225	COG2925	Exonuclease
DYL72_01235	COG1346	cytolysis
DYL72_01240	COG0295	cytidine deaminase activity
DYL72_01245	COG3300	MHYT domain
DYL72_01245	COG5001	Diguanylate cyclase
DYL72_01250	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
DYL72_01275	COG0072	phenylalanine-tRNA ligase activity
DYL72_01275	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DYL72_01320	COG0322	excinuclease ABC activity
DYL72_01325	COG2197	response regulator
DYL72_01330	COG0417	DNA replication proofreading
DYL72_01340	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
DYL72_01345	COG3099	Belongs to the UPF0263 family
DYL72_01355	COG2188	Transcriptional regulator
DYL72_01360	COG1228	amidohydrolase
DYL72_01365	COG0010	Belongs to the arginase family
DYL72_01375	COG2986	histidine ammonia-lyase
DYL72_01390	COG0277	FAD linked oxidase domain protein
DYL72_01390	COG0247	lactate metabolic process
DYL72_01420	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
DYL72_01425	COG1960	acyl-CoA dehydrogenase activity
DYL72_01470	COG0784	Response regulator, receiver
DYL72_01470	COG5002	protein histidine kinase activity
DYL72_01485	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
DYL72_01490	COG2885	chlorophyll binding
DYL72_01510	COG0811	peptide transport
DYL72_01515	COG0824	Thioesterase
DYL72_01520	COG3790	cyd operon protein YbgE
DYL72_01525	COG4890	Cyd operon protein YbgT
DYL72_01530	COG1294	oxidase, subunit
DYL72_01535	COG1271	oxidase subunit
DYL72_01540	COG2255	four-way junction helicase activity
DYL72_01545	COG0632	four-way junction helicase activity
DYL72_01550	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
DYL72_01555	COG0215	cysteine-tRNA ligase activity
DYL72_01560	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
DYL72_01565	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
DYL72_01570	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
DYL72_01575	COG3012	SEC-C Motif Domain Protein
DYL72_01590	COG1199	ATP-dependent helicase activity
DYL72_01600	COG3923	Primosomal replication protein n
DYL72_01610	COG0840	transmembrane signaling receptor activity
DYL72_01640	COG2433	Pfam Transposase IS66
DYL72_01660	COG0708	Exodeoxyribonuclease III
DYL72_01665	COG4160	amino acid transport
DYL72_01670	COG4215	(ABC) transporter
DYL72_01695	COG1882	Formate acetyltransferase
DYL72_01710	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DYL72_01725	COG2766	serine protein kinase
DYL72_01730	COG2718	Belongs to the UPF0229 family
DYL72_01735	COG2719	SpoVR family
DYL72_01740	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
DYL72_01755	COG1132	(ABC) transporter
DYL72_01760	COG2333	competence protein COMEC
DYL72_01760	COG0658	competence protein
DYL72_01770	COG4591	ABC-type transport system involved in lipoprotein release permease component
DYL72_01775	COG1136	(ABC) transporter
DYL72_01780	COG4591	ABC-type transport system involved in lipoprotein release permease component
DYL72_01790	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
DYL72_01805	COG1252	NADH dehydrogenase
DYL72_01835	COG0537	adenosine 5'-monophosphoramidase activity
DYL72_01850	COG2186	Transcriptional regulator
DYL72_01855	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
DYL72_01865	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
DYL72_01870	COG2226	methyltransferase
DYL72_01885	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
DYL72_01895	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
DYL72_01900	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
DYL72_01910	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DYL72_01920	COG4120	Belongs to the binding-protein-dependent transport system permease family
DYL72_01930	COG3092	negative regulation of chromosome organization
DYL72_01935	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DYL72_01940	COG0280	phosphate acetyltransferase
DYL72_01940	COG0857	belongs to the CobB CobQ family
DYL72_01945	COG0435	Glutathione S-transferase
DYL72_01955	COG0444	Belongs to the ABC transporter superfamily
DYL72_01960	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DYL72_01965	COG0601	transmembrane transport
DYL72_01980	COG5002	protein histidine kinase activity
DYL72_01980	COG0784	Response regulator, receiver
DYL72_02005	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DYL72_02010	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DYL72_02030	COG1216	Glycosyl transferase, family 2
DYL72_02060	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DYL72_02070	COG1028	Short-chain dehydrogenase reductase Sdr
DYL72_02120	COG0800	Aldolase
DYL72_02125	COG2610	gluconate transmembrane transporter activity
DYL72_02130	COG3265	gluconokinase activity
DYL72_02135	COG0129	dihydroxy-acid dehydratase activity
DYL72_02140	COG1609	Transcriptional regulator
DYL72_02155	COG5002	protein histidine kinase activity
DYL72_02155	COG3850	Histidine kinase
DYL72_02165	COG2985	domain, Protein
DYL72_02195	COG2433	Pfam Transposase IS66
DYL72_02205	COG0642	Histidine kinase
DYL72_02210	COG0745	RESPONSE REGULATOR receiver
DYL72_02220	COG0300	oxidoreductase activity
DYL72_02230	COG1022	Amp-dependent synthetase and ligase
DYL72_02240	COG3335	DDE superfamily endonuclease
DYL72_02260	COG1061	Type III restriction enzyme res subunit
DYL72_02280	COG3335	DDE superfamily endonuclease
DYL72_02305	COG3706	GGDEF domain
DYL72_02320	COG3126	Type III secretion system lipoprotein chaperone (YscW)
DYL72_02325	COG1946	Acyl-CoA thioesterase
DYL72_02330	COG1522	sequence-specific DNA binding
DYL72_02365	COG0318	PFAM AMP-dependent synthetase and ligase
DYL72_02370	COG1441	menaquinone biosynthetic process
DYL72_02375	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
DYL72_02385	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
DYL72_02390	COG1169	isochorismate synthase
DYL72_02400	COG0436	Aminotransferase
DYL72_02405	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
DYL72_02410	COG0232	Belongs to the dGTPase family. Type 2 subfamily
DYL72_02425	COG0616	signal peptide processing
DYL72_02430	COG1028	Short-chain dehydrogenase reductase Sdr
DYL72_02435	COG0835	chemotaxis
DYL72_02435	COG0784	Response regulator, receiver
DYL72_02440	COG1940	carbohydrate kinase activity
DYL72_02450	COG4667	esterase of the alpha-beta hydrolase superfamily
DYL72_02465	COG0733	neurotransmitter:sodium symporter activity
DYL72_02475	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DYL72_02475	COG1263	PTS System
DYL72_02480	COG0084	hydrolase, TatD family'
DYL72_02485	COG0470	DNA polymerase III
DYL72_02490	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
DYL72_02495	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
DYL72_02500	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DYL72_02525	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DYL72_02535	COG0333	Belongs to the bacterial ribosomal protein bL32 family
DYL72_02540	COG1399	metal-binding, possibly nucleic acid-binding protein
DYL72_02545	COG0424	maF-like protein
DYL72_02550	COG0564	pseudouridine synthase activity
DYL72_02555	COG1530	ribonuclease E activity
DYL72_02565	COG1012	belongs to the aldehyde dehydrogenase family
DYL72_02565	COG1454	alcohol dehydrogenase
DYL72_02570	COG2095	MarC family integral membrane protein
DYL72_02575	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DYL72_02580	COG1757	Na H antiporter
DYL72_02585	COG3385	transposase activity
DYL72_02600	COG3082	Protein of unknown function (DUF1414)
DYL72_02605	COG3083	sulfuric ester hydrolase activity
DYL72_02615	COG0243	molybdopterin cofactor binding
DYL72_02670	COG3335	DDE superfamily endonuclease
DYL72_02685	COG3501	Rhs element vgr protein
DYL72_02715	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
DYL72_02725	COG1196	nuclear chromosome segregation
DYL72_02730	COG0732	type I restriction modification DNA specificity domain
DYL72_02780	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
DYL72_02800	COG2853	Lipoprotein
DYL72_02815	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DYL72_02820	COG1138	Cytochrome C-type biogenesis protein
DYL72_02825	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
DYL72_02835	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
DYL72_02840	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
DYL72_02845	COG4133	protoheme IX ABC transporter activity
DYL72_02855	COG0835	chemotaxis
DYL72_02865	COG1192	Involved in chromosome partitioning
DYL72_02870	COG2201	protein-glutamate methylesterase activity
DYL72_02875	COG2198	Histidine kinase
DYL72_02875	COG0643	Histidine kinase
DYL72_02880	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
DYL72_02895	COG0455	bacterial-type flagellum organization
DYL72_02905	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
DYL72_02910	COG2062	phosphohistidine phosphatase, SixA
DYL72_02915	COG1025	Belongs to the peptidase M16 family
DYL72_02920	COG3102	Protein conserved in bacteria
DYL72_02945	COG1918	ferrous iron import across plasma membrane
DYL72_02950	COG4977	sequence-specific DNA binding
DYL72_02955	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
DYL72_02960	COG1121	(ABC) transporter
DYL72_02965	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DYL72_02980	COG0508	dehydrogenase complex catalyzes the overall conversion of
DYL72_02985	COG0567	Dehydrogenase, E1 component
DYL72_03000	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
DYL72_03005	COG2009	succinate dehydrogenase
DYL72_03015	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
DYL72_03025	COG0033	Phosphoglucomutase
DYL72_03030	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
DYL72_03035	COG0596	Alpha beta hydrolase
DYL72_03045	COG0716	FMN binding
DYL72_03050	COG1346	cytolysis
DYL72_03060	COG0583	DNA-binding transcription factor activity
DYL72_03070	COG0735	belongs to the Fur family
DYL72_03075	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DYL72_03080	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
DYL72_03085	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DYL72_03090	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DYL72_03090	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
DYL72_03095	COG0431	NADPH-dependent FMN reductase
DYL72_03105	COG3101	peptidyl-lysine hydroxylation
DYL72_03115	COG2860	membrane
DYL72_03120	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
DYL72_03125	COG2890	protein-(glutamine-N5) methyltransferase activity
DYL72_03130	COG2840	Smr protein MutS2
DYL72_03140	COG1684	flagellar biosynthetic protein fliR
DYL72_03145	COG1987	bacterial-type flagellum assembly
DYL72_03195	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
DYL72_03205	COG1677	Flagellar hook-basal body complex protein FliE
DYL72_03210	COG2204	response regulator
DYL72_03215	COG4191	Histidine kinase
DYL72_03220	COG2204	response regulator
DYL72_03225	COG1516	flagellar protein fliS
DYL72_03235	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
DYL72_03260	COG2837	iron assimilation
DYL72_03285	COG1393	Belongs to the ArsC family
DYL72_03290	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
DYL72_03310	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DYL72_03330	COG2433	Pfam Transposase IS66
DYL72_03365	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
DYL72_03410	COG2433	Pfam Transposase IS66
DYL72_03430	COG2433	Pfam Transposase IS66
DYL72_03435	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DYL72_03435	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
DYL72_03440	COG3550	peptidyl-serine autophosphorylation
DYL72_03475	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
DYL72_03495	COG4783	chaperone-mediated protein folding
DYL72_03500	COG1393	Belongs to the ArsC family
DYL72_03520	COG2233	PERMEase
DYL72_03525	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
DYL72_03535	COG2877	3-deoxy-8-phosphooctulonate synthase activity
DYL72_03540	COG2912	Transglutaminase-like superfamily
DYL72_03545	COG3094	Invasion gene expression up-regulator, SirB
DYL72_03550	COG2890	protein-(glutamine-N5) methyltransferase activity
DYL72_03555	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
DYL72_03560	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
DYL72_03565	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
DYL72_03580	COG0193	aminoacyl-tRNA hydrolase activity
DYL72_03685	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
DYL72_03695	COG3951	Flagellar rod assembly protein muramidase FlgJ
DYL72_03695	COG1705	Flagellar rod assembly protein muramidase FlgJ
DYL72_03700	COG1706	bacterial-type flagellum-dependent cell motility
DYL72_03705	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
DYL72_03710	COG4786	Flagellar basal body rod
DYL72_03715	COG4787	bacterial-type flagellum-dependent cell motility
DYL72_03720	COG1749	Flagellar hook protein flgE
DYL72_03725	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
DYL72_03730	COG1558	bacterial-type flagellum-dependent cell motility
DYL72_03735	COG1815	bacterial-type flagellum-dependent cell motility
DYL72_03745	COG0835	chemotaxis
DYL72_03745	COG0784	Response regulator, receiver
DYL72_03755	COG2747	anti-sigma28 factor FlgM
DYL72_03800	COG2217	Heavy metal translocating P-type atpase
DYL72_03800	COG2608	mercury ion transmembrane transporter activity
DYL72_03825	COG3385	transposase activity
DYL72_03830	COG1187	pseudouridine synthase activity
DYL72_03835	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
DYL72_03840	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
DYL72_03845	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
DYL72_03850	COG0121	glutamine amidotransferase
DYL72_03855	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
DYL72_03870	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
DYL72_03880	COG2226	methyltransferase
DYL72_03885	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DYL72_03890	COG0741	lytic transglycosylase activity
DYL72_03890	COG1388	LysM domain
DYL72_03905	COG0347	Belongs to the P(II) protein family
DYL72_03915	COG0037	tRNA processing
DYL72_03920	COG0825	malonyl-CoA metabolic process
DYL72_03925	COG0587	DNA-directed DNA polymerase activity
DYL72_03935	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
DYL72_03945	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
DYL72_03950	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
DYL72_03955	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
DYL72_03965	COG0750	zinc metalloprotease
DYL72_03970	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
DYL72_03975	COG0575	Belongs to the CDS family
DYL72_03980	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
DYL72_03985	COG0233	cytoplasmic translational termination
DYL72_03995	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
DYL72_04000	COG0052	Belongs to the universal ribosomal protein uS2 family
DYL72_04005	COG0024	Methionine aminopeptidase
DYL72_04020	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
DYL72_04025	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
DYL72_04050	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DYL72_04050	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DYL72_04060	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
DYL72_04085	COG2252	PERMEase
DYL72_04090	COG2195	Cleaves the N-terminal amino acid of tripeptides
DYL72_04095	COG4067	protein conserved in archaea
DYL72_04095	COG0189	ligase activity
DYL72_04100	COG0189	ligase activity
DYL72_04110	COG0733	neurotransmitter:sodium symporter activity
DYL72_04115	COG5001	Diguanylate cyclase
DYL72_04115	COG2203	Gaf domain
DYL72_04115	COG3706	GGDEF domain
DYL72_04115	COG4251	negative regulation of phosphorylation
DYL72_04125	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
DYL72_04135	COG1477	protein flavinylation
DYL72_04170	COG0271	Belongs to the BolA IbaG family
DYL72_04190	COG2211	Major facilitator Superfamily
DYL72_04200	COG1595	DNA-templated transcription, initiation
DYL72_04215	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
DYL72_04225	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
DYL72_04230	COG2166	iron-sulfur cluster assembly
DYL72_04235	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
DYL72_04240	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
DYL72_04250	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
DYL72_04250	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
DYL72_04260	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
DYL72_04265	COG1074	ATP-dependent DNA helicase activity
DYL72_04270	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
DYL72_04285	COG3141	response to X-ray
DYL72_04290	COG2171	N-acyltransferase activity
DYL72_04320	COG1609	Transcriptional regulator
DYL72_04330	COG1085	galactose-1-phosphate uridylyltransferase
DYL72_04345	COG0784	Response regulator, receiver
DYL72_04345	COG3437	response regulator, receiver
DYL72_04350	COG1022	Amp-dependent synthetase and ligase
DYL72_04355	COG4628	conserved protein (DUF2132)
DYL72_04360	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
DYL72_04365	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
DYL72_04375	COG0560	Phosphoserine phosphatase
DYL72_04385	COG0813	purine-nucleoside phosphorylase activity
DYL72_04390	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
DYL72_04400	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
DYL72_04405	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DYL72_04410	COG0084	hydrolase, TatD family'
DYL72_04420	COG1115	amino acid carrier protein
DYL72_04435	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
DYL72_04440	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
DYL72_04445	COG3445	Acts as a radical domain for damaged PFL and possibly other radical proteins
DYL72_04450	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
DYL72_04455	COG0083	homoserine kinase activity
DYL72_04475	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
DYL72_04480	COG3335	DDE superfamily endonuclease
DYL72_04485	COG0745	RESPONSE REGULATOR receiver
DYL72_04495	COG0784	Response regulator, receiver
DYL72_04495	COG2198	Histidine kinase
DYL72_04495	COG5002	protein histidine kinase activity
DYL72_04500	COG1242	4 iron, 4 sulfur cluster binding
DYL72_04505	COG0069	glutamate synthase activity
DYL72_04505	COG0070	glutamate synthase
DYL72_04505	COG0067	glutamate synthase
DYL72_04515	COG0067	glutamate synthase
DYL72_04515	COG0070	glutamate synthase
DYL72_04515	COG0069	glutamate synthase activity
DYL72_04520	COG0493	'glutamate synthase
DYL72_04540	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DYL72_04545	COG2860	membrane
DYL72_04550	COG0583	DNA-binding transcription factor activity
DYL72_04555	COG0730	response to heat
DYL72_04565	COG0505	Belongs to the CarA family
DYL72_04575	COG0494	nUDIX hydrolase
DYL72_04580	COG0653	protein targeting
DYL72_04590	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
DYL72_04595	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
DYL72_04600	COG0849	cell division
DYL72_04605	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
DYL72_04610	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
DYL72_04615	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
DYL72_04620	COG0772	Belongs to the SEDS family
DYL72_04625	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
DYL72_04630	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
DYL72_04635	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
DYL72_04640	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
DYL72_04645	COG0768	penicillin binding
DYL72_04650	COG3116	cell division
DYL72_04665	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
DYL72_04670	COG3107	peptidoglycan biosynthetic process
DYL72_04680	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
DYL72_04690	COG2969	positive regulation of protein catabolic process
DYL72_04695	COG0625	glutathione transferase activity
DYL72_04700	COG2857	Cytochrome c1
DYL72_04705	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
DYL72_04710	COG0723	plastoquinol--plastocyanin reductase activity
DYL72_04730	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
DYL72_04735	COG3105	Protein conserved in bacteria
DYL72_04740	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DYL72_04745	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DYL72_04750	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DYL72_04755	COG0187	DNA topoisomerase II activity
DYL72_04760	COG3150	esterase
DYL72_04770	COG3151	Protein conserved in bacteria
DYL72_04775	COG0494	nUDIX hydrolase
DYL72_04780	COG1538	Outer membrane efflux protein
DYL72_04790	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
DYL72_04805	COG3025	triphosphatase activity
DYL72_04810	COG1392	Phosphate transport regulator
DYL72_04815	COG0306	phosphate transporter
DYL72_04820	COG4991	sh3 domain protein
DYL72_04830	COG3409	Peptidoglycan-binding domain 1 protein
DYL72_04830	COG3267	Type II secretory pathway component ExeA
DYL72_04835	COG0617	tRNA 3'-terminal CCA addition
DYL72_04845	COG0504	CTP synthase activity
DYL72_04850	COG3956	TIGRFAM MazG family protein
DYL72_04855	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DYL72_04860	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DYL72_04865	COG4999	Histidine kinase
DYL72_04865	COG3850	Histidine kinase
DYL72_04865	COG3437	response regulator, receiver
DYL72_04865	COG2205	protein histidine kinase activity
DYL72_04870	COG0736	holo-[acyl-carrier-protein] synthase activity
DYL72_04895	COG0681	Belongs to the peptidase S26 family
DYL72_04900	COG0481	GTPase activity
DYL72_04905	COG3086	response to oxidative stress
DYL72_04920	COG1595	DNA-templated transcription, initiation
DYL72_04925	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
DYL72_04935	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
DYL72_04940	COG0354	folic acid binding
DYL72_04955	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DYL72_04960	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DYL72_04970	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
DYL72_04980	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
DYL72_04990	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
DYL72_05000	COG0028	Belongs to the TPP enzyme family
DYL72_05005	COG1022	Amp-dependent synthetase and ligase
DYL72_05010	COG0583	DNA-binding transcription factor activity
DYL72_05015	COG3335	DDE superfamily endonuclease
DYL72_05030	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
DYL72_05035	COG0473	3-isopropylmalate dehydrogenase activity
DYL72_05045	COG0066	3-isopropylmalate dehydratase activity
DYL72_05095	COG3328	transposase activity
DYL72_05115	COG0795	lipopolysaccharide-transporting ATPase activity
DYL72_05120	COG0795	lipopolysaccharide-transporting ATPase activity
DYL72_05125	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
DYL72_05130	COG2927	DNA polymerase III (CHI subunit)
DYL72_05135	COG0525	valine-tRNA ligase activity
DYL72_05140	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DYL72_05145	COG0564	pseudouridine synthase activity
DYL72_05155	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
DYL72_05165	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
DYL72_05180	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
DYL72_05185	COG0251	oxidation-reduction process
DYL72_05200	COG0204	Acyl-transferase
DYL72_05205	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
DYL72_05210	COG5007	Belongs to the BolA IbaG family
DYL72_05220	COG2854	intermembrane phospholipid transfer
DYL72_05225	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
DYL72_05230	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
DYL72_05235	COG1127	ABC transporter
DYL72_05245	COG0517	IMP dehydrogenase activity
DYL72_05245	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
DYL72_05260	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
DYL72_05265	COG1137	ATPase activity
DYL72_05275	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
DYL72_05280	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DYL72_05290	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
DYL72_05295	COG2239	Acts as a magnesium transporter
DYL72_05300	COG0312	modulator of DNA gyrase
DYL72_05305	COG3028	Belongs to the UPF0307 family
DYL72_05310	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
DYL72_05315	COG1178	ABC-type Fe3 transport system permease component
DYL72_05320	COG4143	(ABC) transporter
DYL72_05325	COG0163	prenyltransferase activity
DYL72_05330	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
DYL72_05335	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
DYL72_05340	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
DYL72_05345	COG2105	PFAM AIG2 family protein
DYL72_05350	COG2911	Protein conserved in bacteria
DYL72_05355	COG0729	surface antigen
DYL72_05360	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DYL72_05365	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
DYL72_05400	COG0529	Catalyzes the synthesis of activated sulfate
DYL72_05405	COG2895	sulfate adenylyltransferase (ATP) activity
DYL72_05410	COG0175	sulfate reduction
DYL72_05415	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
DYL72_05415	COG1648	precorrin-2 dehydrogenase activity
DYL72_05445	COG3335	DDE superfamily endonuclease
DYL72_05470	COG0513	Belongs to the DEAD box helicase family
DYL72_05475	COG2153	protein acetylation
DYL72_05480	COG3061	Opacity-associated protein A
DYL72_05480	COG3266	domain, Protein
DYL72_05485	COG0545	Peptidyl-prolyl cis-trans isomerase
DYL72_05490	COG0203	ribosomal protein L17
DYL72_05500	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
DYL72_05505	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
DYL72_05510	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
DYL72_05520	COG0201	protein transport
DYL72_05545	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
DYL72_05550	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
DYL72_05570	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
DYL72_05575	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
DYL72_05600	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
DYL72_05625	COG0051	transcription antitermination factor activity, RNA binding
DYL72_05630	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DYL72_05635	COG0557	exoribonuclease II activity
DYL72_05640	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
DYL72_05650	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
DYL72_05660	COG1047	Peptidyl-prolyl cis-trans
DYL72_05665	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
DYL72_05675	COG2249	NAD(P)H dehydrogenase (quinone) activity
DYL72_05680	COG0488	(ABC) transporter
DYL72_05690	COG0429	hydrolase of the alpha beta-hydrolase fold
DYL72_05700	COG3954	Phosphoribulokinase
DYL72_05705	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DYL72_05725	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
DYL72_05740	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DYL72_05750	COG0583	DNA-binding transcription factor activity
DYL72_05765	COG0180	Tryptophanyl-tRNA synthetase
DYL72_05770	COG0546	phosphoglycolate phosphatase activity
DYL72_05775	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
DYL72_05780	COG0338	D12 class N6 adenine-specific DNA methyltransferase
DYL72_05795	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
DYL72_05825	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
DYL72_05835	COG0678	peroxiredoxin activity
DYL72_05835	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
DYL72_05840	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DYL72_05850	COG0165	Argininosuccinate lyase
DYL72_05850	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
DYL72_05860	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
DYL72_05865	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
DYL72_05885	COG1045	serine acetyltransferase
DYL72_05890	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
DYL72_05900	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DYL72_05905	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
DYL72_05910	COG1053	succinate dehydrogenase
DYL72_05915	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
DYL72_05920	COG3029	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
DYL72_05930	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
DYL72_05960	COG0459	protein refolding
DYL72_05990	COG0149	triose-phosphate isomerase activity
DYL72_05995	COG0534	Mate efflux family protein
DYL72_06065	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
DYL72_06070	COG1575	Belongs to the MenA family. Type 1 subfamily
DYL72_06090	COG1609	Transcriptional regulator
DYL72_06095	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
DYL72_06105	COG0281	malic enzyme
DYL72_06115	COG0626	cystathionine gamma-synthase activity
DYL72_06120	COG0527	aspartate kinase activity
DYL72_06120	COG0460	homoserine dehydrogenase
DYL72_06125	COG3385	transposase activity
DYL72_06130	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
DYL72_06140	COG1494	fructose-1,6-bisphosphatase
DYL72_06145	COG0205	6-phosphofructokinase activity
DYL72_06150	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
DYL72_06160	COG0745	RESPONSE REGULATOR receiver
DYL72_06165	COG2205	protein histidine kinase activity
DYL72_06170	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
DYL72_06175	COG1278	Cold shock
DYL72_06180	COG3030	protein affecting phage T7 exclusion by the F plasmid
DYL72_06185	COG1027	Aspartate ammonia-lyase
DYL72_06190	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
DYL72_06195	COG1288	antiporter activity
DYL72_06200	COG3335	DDE superfamily endonuclease
DYL72_06210	COG0549	Belongs to the carbamate kinase family
DYL72_06215	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
DYL72_06220	COG0540	Belongs to the ATCase OTCase family
DYL72_06225	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
DYL72_06230	COG1438	arginine binding
DYL72_06235	COG4232	protein-disulfide reductase activity
DYL72_06245	COG3263	regulation of cellular component size
DYL72_06255	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DYL72_06260	COG2198	Histidine kinase
DYL72_06260	COG0784	Response regulator, receiver
DYL72_06260	COG2205	protein histidine kinase activity
DYL72_06265	COG2814	Major facilitator Superfamily
DYL72_06280	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
DYL72_06285	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
DYL72_06290	COG0511	ligase activity, forming carbon-carbon bonds
DYL72_06295	COG0439	Biotin carboxylase
DYL72_06300	COG2264	protein methyltransferase activity
DYL72_06305	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DYL72_06310	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
DYL72_06315	COG0840	transmembrane signaling receptor activity
DYL72_06320	COG0789	Transcriptional regulator
DYL72_06330	COG0151	Belongs to the GarS family
DYL72_06340	COG0776	regulation of translation
DYL72_06345	COG1253	flavin adenine dinucleotide binding
DYL72_06380	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DYL72_06390	COG3068	Protein conserved in bacteria
DYL72_06395	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
DYL72_06400	COG0668	transmembrane transport
DYL72_06415	COG4372	Transposase
DYL72_06425	COG2433	Pfam Transposase IS66
DYL72_06460	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
DYL72_06470	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
DYL72_06540	COG0367	asparagine synthase
DYL72_06565	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
DYL72_06600	COG3307	-O-antigen
DYL72_06610	COG0859	PFAM glycosyl transferase family 9
DYL72_06625	COG1519	Transferase
DYL72_06655	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
DYL72_06655	COG2755	lipolytic protein G-D-S-L family
DYL72_06660	COG3642	lipopolysaccharide core region biosynthetic process
DYL72_06665	COG0859	PFAM glycosyl transferase family 9
DYL72_06670	COG0463	Glycosyl transferase, family 2
DYL72_06675	COG0859	PFAM glycosyl transferase family 9
DYL72_06680	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
DYL72_06685	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
DYL72_06695	COG0267	Belongs to the bacterial ribosomal protein bL33 family
DYL72_06710	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
DYL72_06715	COG1309	transcriptional regulator
DYL72_06720	COG1560	Kdo2-lipid A biosynthetic process
DYL72_06725	COG1560	Kdo2-lipid A biosynthetic process
DYL72_06735	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
DYL72_06740	COG1561	YicC-like family, N-terminal region
DYL72_06760	COG0612	Peptidase, M16
DYL72_06780	COG1120	ATPase activity
DYL72_06785	COG4774	siderophore transport
DYL72_06790	COG1132	(ABC) transporter
DYL72_06795	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DYL72_06795	COG1263	PTS System
DYL72_06800	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
DYL72_06820	COG0514	ATP-dependent DNA helicase (RecQ)
DYL72_06825	COG2962	Rard protein
DYL72_06835	COG1280	lysine exporter protein (LysE YggA)
DYL72_06845	COG0210	DNA helicase
DYL72_06850	COG0339	signal peptide processing
DYL72_06855	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
DYL72_06860	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DYL72_06905	COG2433	Pfam Transposase IS66
DYL72_06940	COG2433	Pfam Transposase IS66
DYL72_06950	COG4605	iron ion homeostasis
DYL72_06955	COG4607	ABC-type enterochelin transport system periplasmic component
DYL72_06965	COG4774	siderophore transport
DYL72_06970	COG1122	ATPase activity
DYL72_07030	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DYL72_07085	COG1309	transcriptional regulator
DYL72_07090	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DYL72_07095	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DYL72_07100	COG2960	long-chain fatty acid transporting porin activity
DYL72_07110	COG0583	DNA-binding transcription factor activity
DYL72_07115	COG0635	Involved in the biosynthesis of porphyrin-containing compound
DYL72_07140	COG0218	Necessary for normal cell division and for the maintenance of normal septation
DYL72_07145	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DYL72_07145	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DYL72_07155	COG0084	hydrolase, TatD family'
DYL72_07160	COG0805	protein transport
DYL72_07165	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
DYL72_07175	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
DYL72_07190	COG1322	Protein conserved in bacteria
DYL72_07195	COG0697	spore germination
DYL72_07275	COG2433	Pfam Transposase IS66
DYL72_07305	COG0606	chelatase, subunit chli
DYL72_07315	COG3978	acetolactate synthase activity
DYL72_07320	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DYL72_07325	COG0129	dihydroxy-acid dehydratase activity
DYL72_07335	COG0604	alcohol dehydrogenase
DYL72_07360	COG2119	membrane
DYL72_07365	COG0752	glycyl-tRNA synthetase alpha subunit
DYL72_07380	COG0071	Belongs to the small heat shock protein (HSP20) family
DYL72_07395	COG0187	DNA topoisomerase II activity
DYL72_07400	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
DYL72_07405	COG0592	DNA-directed DNA polymerase activity
DYL72_07425	COG1126	abc transporter atp-binding protein
DYL72_07440	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
DYL72_07445	COG0706	membrane insertase activity
DYL72_07455	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
DYL72_07460	COG0445	tRNA wobble uridine modification
DYL72_07470	COG1192	Involved in chromosome partitioning
DYL72_07475	COG1475	DNA binding
DYL72_07480	COG3312	ion transport
DYL72_07485	COG0356	it plays a direct role in the translocation of protons across the membrane
DYL72_07495	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
DYL72_07500	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
DYL72_07505	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
DYL72_07510	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
DYL72_07515	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
DYL72_07520	COG0355	proton-transporting ATP synthase activity, rotational mechanism
DYL72_07530	COG2814	Major facilitator Superfamily
DYL72_07535	COG0583	DNA-binding transcription factor activity
DYL72_07540	COG0183	Belongs to the thiolase family
DYL72_07550	COG1739	Uncharacterized protein family UPF0029
DYL72_07555	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
DYL72_07560	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
DYL72_07620	COG0352	thiamine-phosphate diphosphorylase activity
DYL72_07630	COG2104	thiamine diphosphate biosynthetic process
DYL72_07640	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
DYL72_07645	COG0006	proline dipeptidase activity
DYL72_07645	COG0006	proline dipeptidase activity
DYL72_07665	COG1522	sequence-specific DNA binding
DYL72_07670	COG0742	ribosomal rna small subunit methyltransferase
DYL72_07680	COG0697	spore germination
DYL72_07685	COG0589	response to stress
DYL72_07690	COG1528	Iron-storage protein
DYL72_07705	COG2081	HI0933 family
DYL72_07740	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
DYL72_07740	COG0784	Response regulator, receiver
DYL72_07770	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
DYL72_07775	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
DYL72_07780	COG3385	transposase activity
DYL72_07795	COG3084	Protein conserved in bacteria
DYL72_07805	COG1272	protein, Hemolysin III
DYL72_07815	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
DYL72_07820	COG0569	domain protein
DYL72_07825	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
DYL72_07825	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
DYL72_07830	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
DYL72_07835	COG0242	peptide deformylase activity
DYL72_07840	COG1652	LysM domain
DYL72_07845	COG0758	DNA mediated transformation
DYL72_07850	COG2922	Belongs to the Smg family
DYL72_07855	COG0551	DNA topoisomerase type I activity
DYL72_07860	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
DYL72_07865	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
DYL72_07870	COG0009	L-threonylcarbamoyladenylate synthase
DYL72_07875	COG0408	coproporphyrinogen oxidase activity
DYL72_07880	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
DYL72_07890	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
DYL72_07925	COG3071	HemY protein
DYL72_07930	COG2959	enzyme of heme biosynthesis
DYL72_07935	COG1587	Uroporphyrinogen-III synthase
DYL72_07950	COG3072	Adenylate cyclase
DYL72_07965	COG0019	diaminopimelate decarboxylase activity
DYL72_07980	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
DYL72_07985	COG1011	Hydrolase
DYL72_08000	COG0561	phosphatase activity
DYL72_08005	COG2267	carboxylic ester hydrolase activity
DYL72_08010	COG1280	lysine exporter protein (LysE YggA)
DYL72_08015	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
DYL72_08020	COG0783	Belongs to the Dps family
DYL72_08050	COG2095	MarC family integral membrane protein
DYL72_08065	COG2433	Pfam Transposase IS66
DYL72_08120	COG2433	Pfam Transposase IS66
DYL72_08150	COG2003	Belongs to the UPF0758 family
DYL72_08210	COG2433	Pfam Transposase IS66
DYL72_08215	COG0328	RNA-DNA hybrid ribonuclease activity
DYL72_08250	COG2433	Pfam Transposase IS66
DYL72_08275	COG3250	beta-galactosidase activity
DYL72_08300	COG0534	Mate efflux family protein
DYL72_08315	COG2937	Belongs to the GPAT DAPAT family
DYL72_08325	COG3161	chorismate lyase activity
DYL72_08330	COG1580	Controls the rotational direction of flagella during chemotaxis
DYL72_08335	COG0705	Rhomboid family
DYL72_08345	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
DYL72_08350	COG2177	Part of the ABC transporter FtsEX involved in
DYL72_08355	COG2884	Cell division ATP-binding protein ftsE
DYL72_08360	COG0552	protein localization to endoplasmic reticulum
DYL72_08365	COG0742	ribosomal rna small subunit methyltransferase
DYL72_08385	COG3335	DDE superfamily endonuclease
DYL72_08420	COG2433	Pfam Transposase IS66
DYL72_08430	COG4372	Transposase
DYL72_08445	COG2433	Pfam Transposase IS66
DYL72_08455	COG0210	DNA helicase
DYL72_08475	COG4206	TonB-dependent receptor
DYL72_08485	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
DYL72_08525	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
DYL72_08530	COG5001	Diguanylate cyclase
DYL72_08530	COG3300	MHYT domain
DYL72_08540	COG3852	Histidine kinase
DYL72_08550	COG0174	glutamine synthetase
DYL72_08565	COG1490	D-aminoacyl-tRNA deacylase activity
DYL72_08570	COG0456	acetyltransferase
DYL72_08580	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
DYL72_08585	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
DYL72_08590	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
DYL72_08595	COG3031	protein transport across the cell outer membrane
DYL72_08605	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
DYL72_08610	COG1459	type II secretion system
DYL72_08615	COG2165	general secretion pathway protein
DYL72_08620	COG2165	general secretion pathway protein
DYL72_08625	COG2165	general secretion pathway protein
DYL72_08630	COG4795	General secretion pathway protein
DYL72_08635	COG3156	type II secretion system protein K
DYL72_08640	COG3297	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
DYL72_08645	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
DYL72_08655	COG1218	3'(2'),5'-bisphosphate nucleotidase
DYL72_08660	COG0494	nUDIX hydrolase
DYL72_08665	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
DYL72_08665	COG0316	Belongs to the HesB IscA family
DYL72_08670	COG1040	competence protein
DYL72_08675	COG0596	Alpha beta hydrolase
DYL72_08685	COG2183	response to ionizing radiation
DYL72_08690	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
DYL72_08710	COG0583	DNA-binding transcription factor activity
DYL72_08730	COG0745	RESPONSE REGULATOR receiver
DYL72_08740	COG2233	PERMEase
DYL72_08745	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
DYL72_08750	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DYL72_08755	COG1758	RNA polymerase activity
DYL72_08760	COG0194	GDP metabolic process
DYL72_08765	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
DYL72_08770	COG0248	Ppx GppA phosphatase
DYL72_08780	COG3118	belongs to the thioredoxin family
DYL72_08785	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
DYL72_08795	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
DYL72_08880	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DYL72_08890	COG0812	UDP-N-acetylmuramate dehydrogenase activity
DYL72_08895	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
DYL72_08895	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
DYL72_08900	COG1072	(Pantothenic acid kinase))
DYL72_08925	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
DYL72_08930	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
DYL72_08935	COG0250	Participates in transcription elongation, termination and antitermination
DYL72_08945	COG0081	regulation of translation
DYL72_08950	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
DYL72_08955	COG0222	ribosome binding
DYL72_08960	COG0085	RNA polymerase activity
DYL72_08965	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DYL72_08970	COG3385	transposase activity
DYL72_08975	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
DYL72_08980	COG2816	NAD+ diphosphatase activity
DYL72_09000	COG4942	peptidase
DYL72_09005	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
DYL72_09020	COG0490	domain, Protein
DYL72_09020	COG0471	metal ion transport
DYL72_09030	COG1162	GTPase activity
DYL72_09035	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
DYL72_09090	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
DYL72_09095	COG0802	atpase or kinase
DYL72_09100	COG0860	N-Acetylmuramoyl-L-alanine amidase
DYL72_09105	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
DYL72_09110	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
DYL72_09115	COG1923	regulation of RNA biosynthetic process
DYL72_09120	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
DYL72_09125	COG0330	HflC and HflK could
DYL72_09130	COG0330	HflC and HflK could
DYL72_09135	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
DYL72_09150	COG0545	Peptidyl-prolyl cis-trans isomerase
DYL72_09155	COG2964	Protein conserved in bacteria
DYL72_09160	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
DYL72_09165	COG2923	Belongs to the DsrF TusC family
DYL72_09180	COG0049	tRNA binding
DYL72_09185	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
DYL72_09190	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
DYL72_09195	COG0360	Binds together with S18 to 16S ribosomal RNA
DYL72_09200	COG2965	DNA replication, synthesis of RNA primer
DYL72_09210	COG0359	binds to the 23S rRNA
DYL72_09220	COG0305	Participates in initiation and elongation during chromosome replication
DYL72_09225	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
DYL72_09230	COG0166	Belongs to the GPI family
DYL72_09240	COG0735	belongs to the Fur family
DYL72_09245	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DYL72_09265	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
DYL72_09270	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
DYL72_09275	COG0175	sulfate reduction
DYL72_09360	COG0646	methionine synthase
DYL72_09360	COG1410	methionine synthase
DYL72_09365	COG0527	aspartate kinase activity
DYL72_09370	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
DYL72_09385	COG2239	Acts as a magnesium transporter
DYL72_09390	COG2433	Pfam Transposase IS66
DYL72_09410	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
DYL72_09425	COG0629	single-stranded DNA binding
DYL72_09430	COG2199	diguanylate cyclase activity
DYL72_09430	COG2200	EAL domain
DYL72_09455	COG3409	Peptidoglycan-binding domain 1 protein
DYL72_09455	COG3267	Type II secretory pathway component ExeA
DYL72_09465	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
DYL72_09470	COG1459	type II secretion system
DYL72_09515	COG1077	Cell shape determining protein MreB Mrl
DYL72_09520	COG1792	Involved in formation and maintenance of cell shape
DYL72_09525	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
DYL72_09530	COG0424	maF-like protein
DYL72_09535	COG1530	ribonuclease E activity
DYL72_09540	COG3164	Protein of unknown function
DYL72_09545	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DYL72_09550	COG0312	modulator of DNA gyrase
DYL72_09555	COG2235	arginine
DYL72_09575	COG0589	response to stress
DYL72_09605	COG0531	amino acid
DYL72_09610	COG3385	transposase activity
DYL72_09615	COG0142	geranyltranstransferase activity
DYL72_09630	COG0211	Belongs to the bacterial ribosomal protein bL27 family
DYL72_09635	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
DYL72_09640	COG2966	Psort location CytoplasmicMembrane, score
DYL72_09645	COG3610	response to peptide
DYL72_09660	COG2967	ApaG domain
DYL72_09670	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
DYL72_09675	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DYL72_09680	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
DYL72_09685	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
DYL72_09735	COG0741	lytic transglycosylase activity
DYL72_09750	COG0220	tRNA (guanine-N7-)-methyltransferase activity
DYL72_09755	COG2066	Belongs to the glutaminase family
DYL72_09760	COG0635	Involved in the biosynthesis of porphyrin-containing compound
DYL72_09785	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DYL72_09790	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
DYL72_09810	COG1678	Uncharacterized ACR, COG1678
DYL72_09820	COG1385	rRNA (uridine-N3-)-methyltransferase activity
DYL72_09825	COG2356	endonuclease I
DYL72_09830	COG3091	SprT-like family
DYL72_09835	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
DYL72_09840	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
DYL72_09845	COG0583	DNA-binding transcription factor activity
DYL72_09850	COG4771	TonB-dependent receptor
DYL72_09855	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
DYL72_09860	COG0126	phosphoglycerate kinase activity
DYL72_09865	COG0191	fructose-bisphosphate aldolase activity
DYL72_09870	COG0668	transmembrane transport
DYL72_09890	COG3706	GGDEF domain
DYL72_09895	COG3385	transposase activity
DYL72_09900	COG0469	pyruvate kinase activity
DYL72_09905	COG1349	DNA-binding transcription factor activity
DYL72_09980	COG3335	DDE superfamily endonuclease
DYL72_09990	COG0583	DNA-binding transcription factor activity
DYL72_09995	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
DYL72_10015	COG3501	Rhs element vgr protein
DYL72_10060	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
DYL72_10065	COG0358	DNA primase activity
DYL72_10070	COG1610	YqeY-like protein
DYL72_10090	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
DYL72_10095	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
DYL72_10100	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
DYL72_10105	COG1968	undecaprenyl-diphosphatase activity
DYL72_10110	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
DYL72_10115	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
DYL72_10120	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
DYL72_10125	COG0585	pseudouridine synthase activity
DYL72_10130	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
DYL72_10135	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
DYL72_10140	COG4942	peptidase
DYL72_10140	COG1388	LysM domain
DYL72_10145	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
DYL72_10150	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
DYL72_10160	COG4150	thiosulfate binding
DYL72_10170	COG4208	sulfate ABC transporter
DYL72_10175	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
DYL72_10180	COG1546	Belongs to the CinA family
DYL72_10185	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
DYL72_10190	COG2137	regulation of response to DNA damage stimulus
DYL72_10195	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
DYL72_10200	COG0527	aspartate kinase activity
DYL72_10250	COG3630	sodium ion export across plasma membrane
DYL72_10255	COG5016	pyruvate
DYL72_10255	COG0511	ligase activity, forming carbon-carbon bonds
DYL72_10260	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
DYL72_10265	COG1063	alcohol dehydrogenase
DYL72_10270	COG1238	metal cluster binding
DYL72_10275	COG0612	Peptidase, M16
DYL72_10290	COG4536	flavin adenine dinucleotide binding
DYL72_10295	COG4137	Cytochrome C assembly protein
DYL72_10300	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
DYL72_10320	COG0335	large ribosomal subunit rRNA binding
DYL72_10325	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
DYL72_10330	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
DYL72_10335	COG0237	dephospho-CoA kinase activity
DYL72_10345	COG1459	type II secretion system
DYL72_10350	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
DYL72_10360	COG0157	Belongs to the NadC ModD family
DYL72_10370	COG0716	FMN binding
DYL72_10375	COG4974	Belongs to the 'phage' integrase family
DYL72_10380	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
DYL72_10385	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
DYL72_10390	COG2186	Transcriptional regulator
DYL72_10395	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
DYL72_10400	COG0508	dehydrogenase complex catalyzes the overall conversion of
DYL72_10405	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DYL72_10420	COG0288	reversible hydration of carbon dioxide
DYL72_10425	COG0659	secondary active sulfate transmembrane transporter activity
DYL72_10430	COG1131	(ABC) transporter
DYL72_10485	COG4974	Belongs to the 'phage' integrase family
DYL72_10505	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
DYL72_10515	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
DYL72_10525	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
DYL72_10530	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
DYL72_10535	COG1489	DNA binding
DYL72_10540	COG1643	Atp-dependent helicase
DYL72_10545	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DYL72_10550	COG1752	Esterase of the alpha-beta hydrolase superfamily
DYL72_10555	COG1049	propionate catabolic process, 2-methylcitrate cycle
DYL72_10560	COG1929	Belongs to the glycerate kinase type-1 family
DYL72_10565	COG2610	gluconate transmembrane transporter activity
DYL72_10570	COG3835	regulator
DYL72_10585	COG0004	ammonium transporteR
DYL72_10590	COG1840	ABC-type Fe3 transport system, periplasmic component
DYL72_10605	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DYL72_10620	COG2971	BadF BadG BcrA BcrD
DYL72_10630	COG4608	Belongs to the ABC transporter superfamily
DYL72_10635	COG0444	Belongs to the ABC transporter superfamily
DYL72_10640	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DYL72_10650	COG0747	negative chemotaxis
DYL72_10665	COG0628	permease
DYL72_10670	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
DYL72_10675	COG0316	Belongs to the HesB IscA family
DYL72_10690	COG0739	heme binding
DYL72_10695	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
DYL72_10705	COG2239	Acts as a magnesium transporter
DYL72_10710	COG2027	D-alanyl-D-alanine carboxypeptidase
DYL72_10715	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
DYL72_10720	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
DYL72_10725	COG1534	Rna-binding protein
DYL72_10735	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DYL72_10740	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
DYL72_10745	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DYL72_10750	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
DYL72_10765	COG0779	Required for maturation of 30S ribosomal subunits
DYL72_10770	COG0195	Participates in both transcription termination and antitermination
DYL72_10785	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
DYL72_10805	COG1846	Transcriptional regulator
DYL72_10835	COG3153	acetyltransferase
DYL72_10860	COG0513	Belongs to the DEAD box helicase family
DYL72_10865	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
DYL72_10880	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
DYL72_10885	COG2204	response regulator
DYL72_10895	COG0667	Aldo Keto reductase
DYL72_10900	COG3066	DNA modification
DYL72_10905	COG0494	nUDIX hydrolase
DYL72_10910	COG3605	phosphoenolpyruvate-protein phosphotransferase activity
DYL72_10915	COG0730	response to heat
DYL72_10925	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
DYL72_10930	COG1283	sodium-dependent phosphate transmembrane transporter activity
DYL72_10935	COG0583	DNA-binding transcription factor activity
DYL72_10940	COG0640	Transcriptional regulator
DYL72_10950	COG0728	peptidoglycan biosynthetic process
DYL72_10955	COG0196	riboflavin kinase activity
DYL72_10965	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
DYL72_10970	COG1047	Peptidyl-prolyl cis-trans
DYL72_10980	COG1966	Carbon starvation protein
DYL72_10995	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
DYL72_11000	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
DYL72_11005	COG1472	Belongs to the glycosyl hydrolase 3 family
DYL72_11010	COG3279	Response regulator of the LytR AlgR family
DYL72_11015	COG3275	phosphorelay sensor kinase activity
DYL72_11020	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
DYL72_11025	COG1605	Chorismate mutase
DYL72_11025	COG0287	Prephenate dehydrogenase
DYL72_11035	COG0488	(ABC) transporter
DYL72_11050	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
DYL72_11055	COG5001	Diguanylate cyclase
DYL72_11060	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
DYL72_11065	COG0077	Prephenate dehydratase
DYL72_11065	COG1605	Chorismate mutase
DYL72_11070	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
DYL72_11075	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DYL72_11080	COG0564	pseudouridine synthase activity
DYL72_11090	COG0542	response to heat
DYL72_11130	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
DYL72_11145	COG0745	RESPONSE REGULATOR receiver
DYL72_11150	COG5002	protein histidine kinase activity
DYL72_11160	COG0248	Ppx GppA phosphatase
DYL72_11165	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
DYL72_11175	COG0581	inorganic phosphate transmembrane transporter activity
DYL72_11180	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
DYL72_11185	COG0704	Plays a role in the regulation of phosphate uptake
DYL72_11190	COG3142	Participates in the control of copper homeostasis
DYL72_11195	COG0450	alkyl hydroperoxide reductase
DYL72_11200	COG0583	DNA-binding transcription factor activity
DYL72_11205	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
DYL72_11215	COG0517	IMP dehydrogenase activity
DYL72_11220	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
DYL72_11230	COG1862	Preprotein translocase
DYL72_11235	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DYL72_11240	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DYL72_11245	COG0483	inositol monophosphate 1-phosphatase activity
DYL72_11250	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
DYL72_11255	COG1959	2 iron, 2 sulfur cluster binding
DYL72_11265	COG0822	iron-sulfur transferase activity
DYL72_11270	COG0316	Belongs to the HesB IscA family
DYL72_11280	COG0443	Heat shock 70 kDa protein
DYL72_11285	COG0633	Ferredoxin
DYL72_11290	COG2975	iron-sulfur cluster assembly
DYL72_11295	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
DYL72_11310	COG1426	Protein conserved in bacteria
DYL72_11315	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
DYL72_11320	COG0124	histidyl-tRNA synthetase
DYL72_11325	COG2976	Protein conserved in bacteria
DYL72_11330	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DYL72_11335	COG1160	GTP binding
DYL72_11350	COG0516	GMP reductase activity
DYL72_11350	COG0517	IMP dehydrogenase activity
DYL72_11355	COG0519	Catalyzes the synthesis of GMP from XMP
DYL72_11355	COG0518	GMP synthase (glutamine-hydrolyzing) activity
DYL72_11360	COG0351	phosphomethylpyrimidine kinase
DYL72_11370	COG1584	GPR1 FUN34 yaaH family protein
DYL72_11375	COG1115	amino acid carrier protein
DYL72_11380	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DYL72_11395	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
DYL72_11400	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
DYL72_11400	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
DYL72_11415	COG3964	amidohydrolase
DYL72_11445	COG0556	nucleotide-excision repair
DYL72_11515	COG2003	Belongs to the UPF0758 family
DYL72_11565	COG2433	Pfam Transposase IS66
DYL72_11620	COG2003	Belongs to the UPF0758 family
DYL72_11630	COG4409	exo-alpha-(2->6)-sialidase activity
DYL72_11635	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
DYL72_11640	COG1940	carbohydrate kinase activity
DYL72_11645	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
DYL72_11655	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
DYL72_11660	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
DYL72_11665	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
DYL72_11670	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DYL72_11675	COG1737	Transcriptional regulator
DYL72_11680	COG3055	Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses
DYL72_11685	COG3055	Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses
DYL72_11700	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
DYL72_11705	COG3716	PTS system mannose fructose sorbose family IID component
DYL72_11710	COG3715	PTS system
DYL72_11715	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DYL72_11720	COG2222	sugar isomerase
DYL72_11730	COG1349	DNA-binding transcription factor activity
DYL72_11735	COG1349	DNA-binding transcription factor activity
DYL72_11750	COG2003	Belongs to the UPF0758 family
DYL72_11815	COG2433	Pfam Transposase IS66
DYL72_11830	COG1715	Restriction endonuclease
DYL72_11835	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
DYL72_11840	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
DYL72_11845	COG0732	type I restriction modification DNA specificity domain
DYL72_11850	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
DYL72_11865	COG2433	Pfam Transposase IS66
DYL72_11875	COG0582	viral genome integration into host DNA
DYL72_11890	COG2867	negative regulation of translational initiation
DYL72_11895	COG2914	Belongs to the UPF0125 (RnfH) family
DYL72_11900	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DYL72_11905	COG0497	DNA recombination
DYL72_11915	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
DYL72_11920	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
DYL72_11925	COG0443	Heat shock 70 kDa protein
DYL72_11930	COG0484	heat shock protein binding
DYL72_11965	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
DYL72_11975	COG0583	DNA-binding transcription factor activity
DYL72_11980	COG0590	tRNA wobble adenosine to inosine editing
DYL72_11985	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
DYL72_12010	COG2979	Protein of unknown function (DUF533)
DYL72_12015	COG0442	prolyl-tRNA aminoacylation
DYL72_12020	COG1720	tRNA m6t6A37 methyltransferase activity
DYL72_12030	COG0257	Belongs to the bacterial ribosomal protein bL36 family
DYL72_12060	COG3098	single-species biofilm formation
DYL72_12065	COG0564	pseudouridine synthase activity
DYL72_12070	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
DYL72_12075	COG0142	geranyltranstransferase activity
DYL72_12085	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
DYL72_12095	COG0301	tRNA thio-modification
DYL72_12095	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DYL72_12100	COG0583	DNA-binding transcription factor activity
DYL72_12105	COG2363	Small membrane protein
DYL72_12115	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DYL72_12120	COG1611	Belongs to the LOG family
DYL72_12125	COG3706	GGDEF domain
DYL72_12145	COG5595	Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310)
DYL72_12150	COG1464	Belongs to the NlpA lipoprotein family
DYL72_12155	COG2011	ABC-type metal ion transport system permease component
DYL72_12160	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
DYL72_12165	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
DYL72_12180	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DYL72_12180	COG1263	PTS System
DYL72_12185	COG0366	Alpha amylase catalytic
DYL72_12190	COG0745	RESPONSE REGULATOR receiver
DYL72_12195	COG2205	protein histidine kinase activity
DYL72_12230	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DYL72_12235	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DYL72_12240	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DYL72_12245	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
DYL72_12250	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
DYL72_12265	COG1215	transferase activity, transferring glycosyl groups
DYL72_12270	COG0438	transferase activity, transferring glycosyl groups
DYL72_12290	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
DYL72_12325	COG0489	protein tyrosine kinase activity
DYL72_12330	COG1596	polysaccharide export
DYL72_12350	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
DYL72_12365	COG0321	lipoyl(octanoyl) transferase activity
DYL72_12370	COG2921	Belongs to the UPF0250 family
DYL72_12375	COG1686	Belongs to the peptidase S11 family
DYL72_12380	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
DYL72_12385	COG0772	Belongs to the SEDS family
DYL72_12390	COG0768	penicillin binding
DYL72_12395	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
DYL72_12400	COG0799	negative regulation of ribosome biogenesis
DYL72_12405	COG1466	dna polymerase III delta subunit
DYL72_12410	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
DYL72_12415	COG0495	leucyl-tRNA aminoacylation
DYL72_12420	COG2888	peptidyl-tyrosine sulfation
DYL72_12425	COG0815	Transfers the fatty acyl group on membrane lipoproteins
DYL72_12430	COG4535	Mg2 and Co2 transporter CorC
DYL72_12440	COG1702	phosphate starvation-inducible protein PhoH
DYL72_12445	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
DYL72_12450	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DYL72_12455	COG2190	(PTS) system
DYL72_12460	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DYL72_12465	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
DYL72_12470	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
DYL72_12475	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
DYL72_12480	COG3115	cell septum assembly
DYL72_12500	COG3335	DDE superfamily endonuclease
DYL72_12505	COG0789	Transcriptional regulator
DYL72_12515	COG0330	HflC and HflK could
DYL72_12520	COG3118	belongs to the thioredoxin family
DYL72_12530	COG1090	epimerase
DYL72_12535	COG0622	Phosphoesterase
DYL72_12550	COG3710	Transcriptional regulator
DYL72_12555	COG0326	Molecular chaperone. Has ATPase activity
DYL72_12565	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
DYL72_12575	COG3385	transposase activity
DYL72_12585	COG0367	asparagine synthase
DYL72_12590	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
DYL72_12590	COG4651	solute:proton antiporter activity
DYL72_12595	COG1846	Transcriptional regulator
DYL72_12595	COG1940	carbohydrate kinase activity
DYL72_12600	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
DYL72_12605	COG2190	(PTS) system
DYL72_12605	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DYL72_12605	COG1263	PTS System
DYL72_12610	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
DYL72_12630	COG0285	dihydrofolate synthase activity
DYL72_12635	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
DYL72_12640	COG1286	toxin biosynthetic process
DYL72_12645	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
DYL72_12650	COG2056	Na+-H+ antiporter family
DYL72_12655	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
DYL72_12665	COG0346	lactoylglutathione lyase activity
DYL72_12690	COG2433	Pfam Transposase IS66
DYL72_12710	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
DYL72_12725	COG4658	electron transport chain
DYL72_12730	COG4656	Part of a membrane complex involved in electron transport
DYL72_12735	COG2878	Part of a membrane complex involved in electron transport
DYL72_12740	COG4657	Part of a membrane complex involved in electron transport
DYL72_12750	COG4774	siderophore transport
DYL72_12750	COG1629	transport
DYL72_12755	COG2382	esterase
DYL72_12775	COG1535	isochorismatase
DYL72_12775	COG3433	isochorismatase activity
DYL72_12780	COG1021	2,3-dihydroxybenzoate-AMP ligase
DYL72_12785	COG1169	isochorismate synthase
DYL72_12790	COG1028	Short-chain dehydrogenase reductase Sdr
DYL72_12795	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
DYL72_12805	COG4771	TonB-dependent receptor
DYL72_12820	COG0583	DNA-binding transcription factor activity
DYL72_12830	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DYL72_12835	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DYL72_12840	COG1902	pentaerythritol trinitrate reductase activity
DYL72_12850	COG2814	Major facilitator Superfamily
DYL72_12855	COG1028	Short-chain dehydrogenase reductase Sdr
DYL72_12870	COG0556	nucleotide-excision repair
DYL72_12875	COG2204	response regulator
DYL72_12880	COG2198	Histidine kinase
DYL72_12885	COG0391	Required for morphogenesis under gluconeogenic growth conditions
DYL72_12890	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
DYL72_12895	COG0521	Mo-molybdopterin cofactor biosynthetic process
DYL72_12905	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
DYL72_12910	COG0314	molybdopterin synthase activity
DYL72_12915	COG2199	diguanylate cyclase activity
DYL72_12920	COG4109	DRTGG domain
DYL72_12925	COG3335	DDE superfamily endonuclease
DYL72_12935	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
DYL72_12945	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DYL72_12945	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DYL72_12950	COG0489	protein tyrosine kinase activity
DYL72_12955	COG0572	uridine kinase
DYL72_12960	COG2982	Protein involved in outer membrane biogenesis
DYL72_12965	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
DYL72_12970	COG2067	long-chain fatty acid transport protein
DYL72_12975	COG2067	long-chain fatty acid transport protein
DYL72_12985	COG1595	DNA-templated transcription, initiation
DYL72_12995	COG0183	Belongs to the thiolase family
DYL72_13000	COG1250	3-hydroxyacyl-CoA dehydrogenase
DYL72_13000	COG1024	Enoyl-CoA hydratase
DYL72_13005	COG0778	Nitroreductase
DYL72_13010	COG0583	DNA-binding transcription factor activity
DYL72_13015	COG0745	RESPONSE REGULATOR receiver
DYL72_13025	COG2832	Protein of unknown function (DUF454)
DYL72_13030	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
DYL72_13040	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
DYL72_13105	COG2433	Pfam Transposase IS66
DYL72_13140	COG2226	methyltransferase
DYL72_13150	COG3385	transposase activity
DYL72_13160	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DYL72_13170	COG3139	Protein of unknown function (DUF1315)
DYL72_13175	COG0252	asparaginase activity
DYL72_13180	COG0616	signal peptide processing
DYL72_13185	COG1902	pentaerythritol trinitrate reductase activity
DYL72_13185	COG0446	pyridine nucleotide-disulphide oxidoreductase
DYL72_13190	COG0788	formyltetrahydrofolate deformylase activity
DYL72_13200	COG1199	ATP-dependent helicase activity
DYL72_13205	COG1214	PFAM Peptidase M22, glycoprotease
DYL72_13220	COG0596	Alpha beta hydrolase
DYL72_13225	COG0318	PFAM AMP-dependent synthetase and ligase
DYL72_13230	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
DYL72_13235	COG3385	transposase activity
DYL72_13245	COG2894	cell division
DYL72_13255	COG3100	YcgL domain-containing protein
DYL72_13260	COG2951	lytic endotransglycosylase activity
DYL72_13265	COG0583	DNA-binding transcription factor activity
DYL72_13270	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DYL72_13295	COG4628	conserved protein (DUF2132)
DYL72_13310	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DYL72_13320	COG0513	Belongs to the DEAD box helicase family
DYL72_13330	COG1760	l-serine dehydratase
DYL72_13335	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
DYL72_13340	COG0745	RESPONSE REGULATOR receiver
DYL72_13345	COG2205	protein histidine kinase activity
DYL72_13350	COG1653	transport
DYL72_13360	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
DYL72_13365	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
DYL72_13370	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
DYL72_13390	COG0544	peptidyl-prolyl cis-trans isomerase activity
DYL72_13405	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
DYL72_13410	COG0776	regulation of translation
DYL72_13415	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DYL72_13420	COG1555	photosystem II stabilization
DYL72_13425	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
DYL72_13430	COG0539	negative regulation of cytoplasmic translation
DYL72_13440	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
DYL72_13445	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
DYL72_13470	COG0583	DNA-binding transcription factor activity
DYL72_13480	COG0686	Belongs to the AlaDH PNT family
DYL72_13485	COG1522	sequence-specific DNA binding
DYL72_13490	COG1674	ftsk spoiiie
DYL72_13500	COG0501	Belongs to the peptidase M48B family
DYL72_13510	COG0300	oxidoreductase activity
DYL72_13525	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
DYL72_13535	COG2268	Band 7 protein
DYL72_13545	COG1032	radical SAM domain protein
DYL72_13570	COG0583	DNA-binding transcription factor activity
DYL72_13575	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
DYL72_13585	COG2350	Protein conserved in bacteria
DYL72_13590	COG1607	acyl-coa hydrolase
DYL72_13620	COG0133	tryptophan synthase activity
DYL72_13625	COG0135	phosphoribosylanthranilate isomerase activity
DYL72_13625	COG0134	indole-3-glycerol-phosphate synthase activity
DYL72_13630	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
DYL72_13635	COG0512	Glutamine amidotransferase of anthranilate synthase
DYL72_13640	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
DYL72_13650	COG0613	PHP domain protein
DYL72_13655	COG0009	L-threonylcarbamoyladenylate synthase
DYL72_13660	COG1187	pseudouridine synthase activity
DYL72_13665	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
DYL72_13670	COG4988	ABC transporter
DYL72_13675	COG0492	ferredoxin-NADP+ reductase activity
DYL72_13680	COG3706	GGDEF domain
DYL72_13680	COG0745	RESPONSE REGULATOR receiver
DYL72_13695	COG2949	membrane
DYL72_13705	COG0281	malic enzyme
DYL72_13725	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
DYL72_13735	COG1737	Transcriptional regulator
DYL72_13740	COG0076	glutamate decarboxylase activity
DYL72_13750	COG2431	L-lysine efflux transmembrane transporter activity
DYL72_13760	COG3070	regulator of competence-specific genes
DYL72_13775	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DYL72_13775	COG4191	Histidine kinase
DYL72_13785	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
DYL72_13790	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
DYL72_13795	COG2915	High frequency lysogenization protein hflD homolog
DYL72_13800	COG0482	sulfurtransferase activity
DYL72_13810	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DYL72_13815	COG2916	Histone family protein nucleoid-structuring protein H-NS
DYL72_13820	COG1757	Na H antiporter
DYL72_13830	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
DYL72_13835	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
DYL72_13840	COG0131	Imidazoleglycerol-phosphate dehydratase
DYL72_13840	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
DYL72_13845	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
DYL72_13850	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
DYL72_13855	COG0107	imidazoleglycerol-phosphate synthase activity
DYL72_13860	COG0140	phosphoribosyl-ATP diphosphatase activity
DYL72_13860	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
DYL72_13865	COG1187	pseudouridine synthase activity
DYL72_13875	COG1278	Cold shock
DYL72_13880	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
DYL72_13885	COG0542	response to heat
DYL72_13890	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
DYL72_13895	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
DYL72_13900	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
DYL72_13905	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
DYL72_13915	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DYL72_13925	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
DYL72_13930	COG0297	glycogen (starch) synthase activity
DYL72_13950	COG3070	regulator of competence-specific genes
DYL72_13955	COG1609	Transcriptional regulator
DYL72_13965	COG0745	RESPONSE REGULATOR receiver
DYL72_13970	COG1434	Gram-negative-bacterium-type cell wall biogenesis
DYL72_13975	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
DYL72_13985	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
DYL72_13990	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
DYL72_14005	COG0189	ligase activity
DYL72_14005	COG4067	protein conserved in archaea
DYL72_14010	COG0500	methyltransferase
DYL72_14020	COG1801	Protein of unknown function DUF72
DYL72_14025	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
DYL72_14030	COG1435	thymidine kinase activity
DYL72_14040	COG1434	Gram-negative-bacterium-type cell wall biogenesis
DYL72_14065	COG2116	formate transmembrane transporter activity
DYL72_14070	COG4459	periplasmic nitrate reductase
DYL72_14075	COG3005	denitrification pathway
DYL72_14080	COG0243	molybdopterin cofactor binding
DYL72_14090	COG1227	inorganic diphosphatase activity
DYL72_14120	COG0515	serine threonine protein kinase
DYL72_14120	COG2815	serine threonine protein kinase
DYL72_14135	COG2433	Pfam Transposase IS66
DYL72_14140	COG4974	Belongs to the 'phage' integrase family
DYL72_14165	COG3344	reverse transcriptase
DYL72_14175	COG2433	Pfam Transposase IS66
DYL72_14195	COG4172	Belongs to the ABC transporter superfamily
DYL72_14205	COG4171	peptide transport system, permease
DYL72_14210	COG4168	peptide transport system, permease
DYL72_14220	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
DYL72_14225	COG1842	Phage shock protein A
DYL72_14240	COG0519	Catalyzes the synthesis of GMP from XMP
DYL72_14245	COG0626	cystathionine gamma-synthase activity
DYL72_14255	COG0733	neurotransmitter:sodium symporter activity
DYL72_14260	COG0564	pseudouridine synthase activity
DYL72_14275	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
DYL72_14280	COG4136	ATPase activity
DYL72_14285	COG4135	transport system, permease component
DYL72_14290	COG4134	Bacterial extracellular solute-binding protein
DYL72_14300	COG3313	Fe-S protein
DYL72_14310	COG0737	Belongs to the 5'-nucleotidase family
DYL72_14320	COG0513	Belongs to the DEAD box helicase family
DYL72_14340	COG2205	protein histidine kinase activity
DYL72_14355	COG1061	Type III restriction enzyme res subunit
DYL72_14360	COG1187	pseudouridine synthase activity
DYL72_14365	COG2814	Major facilitator Superfamily
DYL72_14375	COG0702	epimerase
DYL72_14380	COG0534	Mate efflux family protein
DYL72_14385	COG4181	ATPase activity
DYL72_14400	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
DYL72_14420	COG0019	diaminopimelate decarboxylase activity
DYL72_14425	COG0840	transmembrane signaling receptor activity
DYL72_14455	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DYL72_14460	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DYL72_14465	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
DYL72_14475	COG0840	transmembrane signaling receptor activity
DYL72_14485	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DYL72_14485	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DYL72_14485	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DYL72_14490	COG2207	Transcriptional regulator
DYL72_14500	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DYL72_14510	COG1342	Belongs to the UPF0251 family
DYL72_14530	COG1129	ABC transporter
DYL72_14540	COG0583	DNA-binding transcription factor activity
DYL72_14545	COG3335	DDE superfamily endonuclease
DYL72_14550	COG1902	pentaerythritol trinitrate reductase activity
DYL72_14555	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
DYL72_14560	COG5002	protein histidine kinase activity
DYL72_14565	COG0745	RESPONSE REGULATOR receiver
DYL72_14595	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
DYL72_14600	COG0372	Belongs to the citrate synthase family
DYL72_14605	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
DYL72_14610	COG2828	Protein conserved in bacteria
DYL72_14630	COG0561	phosphatase activity
DYL72_14635	COG0602	queuosine metabolic process
DYL72_14665	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
DYL72_14670	COG1254	Belongs to the acylphosphatase family
DYL72_14675	COG3328	transposase activity
DYL72_14680	COG2920	part of a sulfur-relay system
DYL72_14685	COG0670	Belongs to the BI1 family
DYL72_14690	COG1126	abc transporter atp-binding protein
DYL72_14695	COG0765	amino acid transport
DYL72_14700	COG4597	amino acid ABC transporter
DYL72_14705	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DYL72_14710	COG1648	precorrin-2 dehydrogenase activity
DYL72_14710	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
DYL72_14720	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
DYL72_14725	COG0574	Belongs to the PEP-utilizing enzyme family
DYL72_14725	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DYL72_14740	COG2996	Protein conserved in bacteria
DYL72_14750	COG3008	intermembrane lipid transfer
DYL72_14755	COG2995	paraquat-inducible protein a
DYL72_14760	COG1132	(ABC) transporter
DYL72_14765	COG1956	GAF domain-containing protein
DYL72_14785	COG0308	aminopeptidase N
DYL72_14795	COG2902	Dehydrogenase
DYL72_14800	COG0167	dihydroorotate dehydrogenase activity
DYL72_14810	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
DYL72_14810	COG0116	Belongs to the methyltransferase superfamily
DYL72_14835	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
DYL72_14840	COG1067	ATP-dependent peptidase activity
DYL72_14845	COG3120	sequence-specific DNA binding
DYL72_14860	COG2433	Pfam Transposase IS66
DYL72_14890	COG2433	Pfam Transposase IS66
DYL72_14895	COG0589	response to stress
DYL72_14900	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DYL72_14915	COG2217	Heavy metal translocating P-type atpase
DYL72_14925	COG2010	Cytochrome c
DYL72_14940	COG3278	Belongs to the heme-copper respiratory oxidase family
DYL72_14960	COG2433	Pfam Transposase IS66
DYL72_15180	COG2337	Toxic component of a toxin-antitoxin (TA) module
DYL72_15410	COG2433	Pfam Transposase IS66
DYL72_15530	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
DYL72_15595	COG0583	DNA-binding transcription factor activity
DYL72_15630	COG3626	phosphonate metabolism
DYL72_15635	COG3627	carbon phosphorus lyase activity
DYL72_15640	COG4107	phosphonate C-P lyase system protein PhnK
DYL72_15645	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
DYL72_15650	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
DYL72_16000	COG0179	Fumarylacetoacetate (FAA) hydrolase
DYL72_16025	COG2814	Major facilitator Superfamily
DYL72_16030	COG0583	DNA-binding transcription factor activity
DYL72_16035	COG5001	Diguanylate cyclase
DYL72_16040	COG0739	heme binding
DYL72_16050	COG0659	secondary active sulfate transmembrane transporter activity
DYL72_16075	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
DYL72_16080	COG0581	inorganic phosphate transmembrane transporter activity
DYL72_16085	COG0573	inorganic phosphate transmembrane transporter activity
DYL72_16090	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
DYL72_16100	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DYL72_16105	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DYL72_16140	COG2271	Major facilitator Superfamily
DYL72_16145	COG0584	glycerophosphoryl diester phosphodiesterase
DYL72_16155	COG3527	Alpha-acetolactate decarboxylase
DYL72_16175	COG0583	DNA-binding transcription factor activity
DYL72_16180	COG1620	l-lactate permease
DYL72_16185	COG1304	FMN binding
DYL72_16200	COG1881	PFAM PEBP family protein
DYL72_16215	COG1230	cation diffusion facilitator family transporter
DYL72_16220	COG3122	Protein conserved in bacteria
DYL72_16230	COG3568	Endonuclease Exonuclease Phosphatase
DYL72_16245	COG3335	DDE superfamily endonuclease
DYL72_16255	COG0840	transmembrane signaling receptor activity
DYL72_16285	COG2211	Major facilitator Superfamily
DYL72_16295	COG1067	ATP-dependent peptidase activity
DYL72_16305	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
DYL72_16310	COG0363	glucosamine-6-phosphate deaminase activity
DYL72_16320	COG0583	DNA-binding transcription factor activity
DYL72_16335	COG1609	Transcriptional regulator
DYL72_16340	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DYL72_16345	COG1879	ABC-type sugar transport system periplasmic component
DYL72_16350	COG1172	Belongs to the binding-protein-dependent transport system permease family
DYL72_16355	COG1129	ABC transporter
DYL72_16360	COG1869	D-ribose catabolic process
DYL72_16375	COG2433	Pfam Transposase IS66
DYL72_16415	COG3501	Rhs element vgr protein
DYL72_16425	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
DYL72_16430	COG1640	4-alpha-glucanotransferase
DYL72_16435	COG0058	SHG alpha-glucan phosphorylase activity
DYL72_16440	COG2909	trisaccharide binding
DYL72_16460	COG0840	transmembrane signaling receptor activity
DYL72_16465	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
DYL72_16490	COG3335	DDE superfamily endonuclease
DYL72_16530	COG1262	PFAM Formylglycine-generating sulfatase enzyme
DYL72_16540	COG0259	pyridoxamine-phosphate oxidase activity
DYL72_16570	COG3335	DDE superfamily endonuclease
DYL72_16575	COG0745	RESPONSE REGULATOR receiver
DYL72_16575	COG3706	GGDEF domain
DYL72_16595	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
DYL72_16600	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
DYL72_16605	COG0840	transmembrane signaling receptor activity
DYL72_16615	COG0835	chemotaxis
DYL72_16625	COG0745	RESPONSE REGULATOR receiver
DYL72_16635	COG1444	tRNA N-acetyltransferase activity
DYL72_16640	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
DYL72_16680	COG2084	Dehydrogenase
DYL72_16685	COG0814	amino acid
DYL72_16715	COG0583	DNA-binding transcription factor activity
DYL72_16720	COG2910	NAD(P)H-binding
DYL72_16730	COG3304	Inner membrane component domain
DYL72_16750	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DYL72_16755	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
DYL72_16775	COG0363	glucosamine-6-phosphate deaminase activity
DYL72_16785	COG0739	heme binding
DYL72_16790	COG2213	PTS system mannitol-specific
DYL72_16790	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
DYL72_16795	COG0246	Mannitol dehydrogenase
DYL72_16800	COG3722	fumarate hydratase activity
DYL72_16810	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
DYL72_16815	COG1301	dicarboxylic acid transport
DYL72_16820	COG2259	Doxx family
DYL72_16840	COG1566	PFAM secretion protein HlyD family protein
DYL72_16845	COG1846	Transcriptional regulator
DYL72_16855	COG3046	protein related to deoxyribodipyrimidine photolyase
DYL72_16860	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DYL72_16865	COG0842	Transport permease protein
DYL72_16870	COG1131	(ABC) transporter
DYL72_16885	COG3842	ATPase activity
DYL72_16895	COG1176	ABC-type spermidine putrescine transport system, permease component I
DYL72_16915	COG0513	Belongs to the DEAD box helicase family
DYL72_16920	COG0251	oxidation-reduction process
DYL72_16925	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DYL72_16935	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DYL72_16940	COG1328	CTP reductase activity
DYL72_16950	COG2130	NADP-dependent
DYL72_16955	COG1309	transcriptional regulator
DYL72_16970	COG0745	RESPONSE REGULATOR receiver
DYL72_16980	COG0564	pseudouridine synthase activity
DYL72_16985	COG3335	DDE superfamily endonuclease
DYL72_16995	COG3335	DDE superfamily endonuclease
DYL72_17035	COG3335	DDE superfamily endonuclease
DYL72_17085	COG3501	Rhs element vgr protein
DYL72_17130	COG2433	Pfam Transposase IS66
DYL72_17155	COG0471	metal ion transport
DYL72_17160	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
DYL72_17165	COG3335	DDE superfamily endonuclease
DYL72_17175	COG2188	Transcriptional regulator
DYL72_17180	COG1131	(ABC) transporter
DYL72_17210	COG0671	phosphoesterase, PA-phosphatase related
DYL72_17215	COG4399	Belongs to the UPF0754 family
DYL72_17220	COG1132	(ABC) transporter
DYL72_17240	COG3623	hexulose-6-phosphate isomerase
DYL72_17245	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
DYL72_17250	COG0561	phosphatase activity
DYL72_17300	COG3335	DDE superfamily endonuclease
DYL72_17315	COG0366	Alpha amylase catalytic
DYL72_17325	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
DYL72_17335	COG1999	signal sequence binding
DYL72_17350	COG0786	glutamate:sodium symporter activity
DYL72_17380	COG1566	PFAM secretion protein HlyD family protein
DYL72_17390	COG3706	GGDEF domain
DYL72_17405	COG0813	purine-nucleoside phosphorylase activity
DYL72_17410	COG3272	Protein of unknown function (DUF1722)
DYL72_17415	COG0789	Transcriptional regulator
DYL72_17420	COG0415	Belongs to the DNA photolyase family
DYL72_17425	COG1388	LysM domain
DYL72_17425	COG1376	ErfK ybiS ycfS ynhG family protein
DYL72_17435	COG0513	Belongs to the DEAD box helicase family
DYL72_17465	COG2267	carboxylic ester hydrolase activity
DYL72_17475	COG0366	Alpha amylase catalytic
DYL72_17480	COG4989	oxidoreductase activity
DYL72_17490	COG0577	efflux transmembrane transporter activity
DYL72_17490	COG1136	(ABC) transporter
DYL72_17495	COG0577	efflux transmembrane transporter activity
DYL72_17495	COG1136	(ABC) transporter
DYL72_17510	COG2972	Histidine kinase
DYL72_17510	COG0745	RESPONSE REGULATOR receiver
DYL72_17515	COG3279	Response regulator of the LytR AlgR family
DYL72_17520	COG2203	Gaf domain
DYL72_17520	COG3706	GGDEF domain
DYL72_17520	COG4251	negative regulation of phosphorylation
DYL72_17520	COG5001	Diguanylate cyclase
DYL72_17530	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
DYL72_17540	COG3437	response regulator, receiver
DYL72_17545	COG3850	Histidine kinase
DYL72_17545	COG2205	protein histidine kinase activity
DYL72_17545	COG4999	Histidine kinase
DYL72_17545	COG3437	response regulator, receiver
DYL72_17555	COG0531	amino acid
DYL72_17600	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DYL72_17610	COG1609	Transcriptional regulator
DYL72_17615	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DYL72_17635	COG0673	inositol 2-dehydrogenase activity
DYL72_17640	COG1765	OsmC-like protein
DYL72_17645	COG0110	maltose O-acetyltransferase activity
DYL72_17660	COG0583	DNA-binding transcription factor activity
DYL72_17670	COG0583	DNA-binding transcription factor activity
DYL72_17675	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
DYL72_17680	COG3186	Phenylalanine-4-hydroxylase
DYL72_17690	COG0840	transmembrane signaling receptor activity
DYL72_17695	COG0534	Mate efflux family protein
DYL72_17700	COG2207	Transcriptional regulator
DYL72_17705	COG0784	Response regulator, receiver
DYL72_17705	COG3437	response regulator, receiver
DYL72_17715	COG4191	Histidine kinase
DYL72_17715	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DYL72_17760	COG3240	lipase activity
DYL72_17770	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
DYL72_17775	COG5380	lipid catabolic process
DYL72_17780	COG3291	Pkd domain containing protein
DYL72_17780	COG4412	M6 family metalloprotease domain protein
DYL72_17805	COG4607	ABC-type enterochelin transport system periplasmic component
DYL72_17810	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DYL72_17815	COG4605	iron ion homeostasis
DYL72_17820	COG4604	ABC transporter, ATP-binding protein
DYL72_17835	COG3344	reverse transcriptase
DYL72_17845	COG2814	Major facilitator Superfamily
DYL72_17870	COG0861	Integral membrane protein TerC family
DYL72_17885	COG0697	spore germination
DYL72_17920	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
DYL72_17945	COG0612	Peptidase, M16
DYL72_17960	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
DYL72_17960	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DYL72_17960	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DYL72_17965	COG1105	Belongs to the carbohydrate kinase PfkB family
DYL72_17970	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
DYL72_17970	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
DYL72_17975	COG1609	Transcriptional regulator
DYL72_17980	COG0420	3'-5' exonuclease activity
DYL72_17985	COG0419	ATPase involved in DNA repair
DYL72_17990	COG2205	protein histidine kinase activity
DYL72_17990	COG0784	Response regulator, receiver
DYL72_17995	COG0156	8-amino-7-oxononanoate synthase activity
DYL72_18005	COG0038	chloride channel
DYL72_18010	COG0523	cobalamin synthesis protein
DYL72_18015	COG1136	(ABC) transporter
DYL72_18025	COG1136	(ABC) transporter
DYL72_18025	COG0577	efflux transmembrane transporter activity
DYL72_18040	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
DYL72_18060	COG3335	DDE superfamily endonuclease
DYL72_18100	COG3730	PTS system glucitol sorbitol-specific
DYL72_18115	COG1028	Short-chain dehydrogenase reductase Sdr
DYL72_18120	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
DYL72_18125	COG1349	DNA-binding transcription factor activity
DYL72_18130	COG3730	PTS system glucitol sorbitol-specific
DYL72_18155	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DYL72_18160	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DYL72_18170	COG3005	denitrification pathway
DYL72_18180	COG0243	molybdopterin cofactor binding
DYL72_18190	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
DYL72_18195	COG3850	Histidine kinase
DYL72_18200	COG2197	response regulator
DYL72_18205	COG3069	C4-dicarboxylate transmembrane transporter activity
DYL72_18230	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
DYL72_18240	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
DYL72_18245	COG0513	Belongs to the DEAD box helicase family
DYL72_18295	COG2801	Transposase and inactivated derivatives
DYL72_18335	COG4682	membrane
DYL72_18350	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
DYL72_18385	COG2433	Pfam Transposase IS66
DYL72_18540	COG2433	Pfam Transposase IS66
DYL72_18580	COG0242	peptide deformylase activity
DYL72_18670	COG2433	Pfam Transposase IS66
DYL72_18750	COG3549	Plasmid maintenance system killer
DYL72_18755	COG3093	addiction module antidote protein HigA
DYL72_18765	COG0346	lactoylglutathione lyase activity
DYL72_18800	COG2433	Pfam Transposase IS66
DYL72_18805	COG2161	toxin-antitoxin pair type II binding
DYL72_18810	COG4115	mRNA cleavage
DYL72_18885	COG2433	Pfam Transposase IS66
DYL72_18900	COG2433	Pfam Transposase IS66
DYL72_18930	COG0602	queuosine metabolic process
DYL72_18935	COG1328	CTP reductase activity
DYL72_18940	COG1328	CTP reductase activity
DYL72_18960	COG2433	Pfam Transposase IS66
DYL72_18980	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DYL72_19050	COG2433	Pfam Transposase IS66
DYL72_19120	COG3335	DDE superfamily endonuclease
DYL72_19190	COG2433	Pfam Transposase IS66
DYL72_19230	COG3040	lipid binding
DYL72_19275	COG4067	protein conserved in archaea
DYL72_19275	COG0189	ligase activity
DYL72_19290	COG4166	transmembrane transport
DYL72_19295	COG4174	ABC transporter (Permease)
DYL72_19300	COG4239	(ABC) transporter, permease
DYL72_19305	COG4172	Belongs to the ABC transporter superfamily
DYL72_19310	COG3706	GGDEF domain
DYL72_19310	COG4251	negative regulation of phosphorylation
DYL72_19310	COG5001	Diguanylate cyclase
DYL72_19310	COG2203	Gaf domain
DYL72_19325	COG3038	cytochrome b561
DYL72_19330	COG2353	YceI-like domain
DYL72_19335	COG0840	transmembrane signaling receptor activity
DYL72_19340	COG3335	DDE superfamily endonuclease
DYL72_19345	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DYL72_19350	COG0545	Peptidyl-prolyl cis-trans isomerase
DYL72_19365	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
DYL72_19385	COG2897	thiosulfate sulfurtransferase activity
DYL72_19390	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
DYL72_19395	COG0303	'Molybdopterin
DYL72_19400	COG0302	gtp cyclohydrolase
DYL72_19405	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DYL72_19405	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DYL72_19410	COG2759	Belongs to the formate--tetrahydrofolate ligase family
DYL72_19415	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DYL72_19420	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
DYL72_19430	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
DYL72_19435	COG1011	Hydrolase
DYL72_19440	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
DYL72_19445	COG2188	Transcriptional regulator
DYL72_19465	COG2116	formate transmembrane transporter activity
DYL72_19470	COG0583	DNA-binding transcription factor activity
DYL72_19480	COG3593	DNA synthesis involved in DNA repair
DYL72_19485	COG0737	Belongs to the 5'-nucleotidase family
DYL72_19490	COG0861	Integral membrane protein TerC family
DYL72_19505	COG2824	Alkylphosphonate utilization operon protein PhnA
DYL72_19515	COG2050	protein possibly involved in aromatic compounds catabolism
DYL72_19530	COG0488	(ABC) transporter
DYL72_19550	COG0625	glutathione transferase activity
DYL72_19555	COG2501	S4 domain
DYL72_19560	COG3328	transposase activity
DYL72_19575	COG0840	transmembrane signaling receptor activity
DYL72_19585	COG1278	Cold shock
DYL72_19595	COG3335	DDE superfamily endonuclease
DYL72_19615	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
DYL72_19620	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
DYL72_19630	COG0745	RESPONSE REGULATOR receiver
DYL72_19645	COG3140	Belongs to the UPF0181 family
DYL72_19670	COG2433	Pfam Transposase IS66
DYL72_19705	COG2433	Pfam Transposase IS66
DYL72_19735	COG0583	DNA-binding transcription factor activity
DYL72_19740	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DYL72_19740	COG1042	CoA-binding domain protein
DYL72_19740	COG0045	succinate-CoA ligase (ADP-forming) activity
DYL72_19750	COG1181	Belongs to the D-alanine--D-alanine ligase family
DYL72_19765	COG0023	Translation Initiation Factor
DYL72_19870	COG3335	DDE superfamily endonuclease
DYL72_19900	COG2433	Pfam Transposase IS66
DYL72_19950	COG0724	RNA recognition motif
DYL72_19965	COG3041	Addiction module toxin RelE StbE family
DYL72_19985	COG2433	Pfam Transposase IS66
DYL72_19995	COG2433	Pfam Transposase IS66
DYL72_20020	COG3300	MHYT domain
DYL72_20020	COG5001	Diguanylate cyclase
DYL72_20030	COG5002	protein histidine kinase activity
DYL72_20040	COG0745	RESPONSE REGULATOR receiver
DYL72_20055	COG2203	Gaf domain
DYL72_20055	COG5001	Diguanylate cyclase
DYL72_20055	COG3706	GGDEF domain
DYL72_20055	COG4251	negative regulation of phosphorylation
DYL72_20065	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
DYL72_20070	COG4149	molybdate abc transporter
DYL72_20075	COG0725	ABC transporter, periplasmic molybdate-binding protein
DYL72_20080	COG1492	cobalamin metabolic process
DYL72_20085	COG3111	PFAM Bacterial OB fold (BOF) protein
DYL72_20095	COG3447	MASE1 domain protein
DYL72_20095	COG5001	Diguanylate cyclase
DYL72_20095	COG5002	protein histidine kinase activity
DYL72_20100	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
DYL72_20110	COG2207	Transcriptional regulator
DYL72_20115	COG1979	alcohol dehydrogenase
DYL72_20130	COG1840	ABC-type Fe3 transport system, periplasmic component
DYL72_20140	COG2271	Major facilitator Superfamily
DYL72_20145	COG0469	pyruvate kinase activity
DYL72_20150	COG2198	Histidine kinase
DYL72_20150	COG0784	Response regulator, receiver
DYL72_20150	COG2205	protein histidine kinase activity
DYL72_20155	COG1879	ABC-type sugar transport system periplasmic component
DYL72_20160	COG1803	Methylglyoxal synthase
DYL72_20165	COG0210	DNA helicase
DYL72_20170	COG1289	transmembrane transporter activity
DYL72_20200	COG5002	protein histidine kinase activity
DYL72_20200	COG0784	Response regulator, receiver
DYL72_20215	COG2827	Endonuclease containing a URI domain
DYL72_20240	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
DYL72_20245	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
DYL72_20250	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
DYL72_20255	COG3075	Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor
DYL72_20260	COG0247	lactate metabolic process
DYL72_20265	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DYL72_20275	COG0653	protein targeting
DYL72_20290	COG2433	Pfam Transposase IS66
DYL72_20315	COG3118	belongs to the thioredoxin family
DYL72_20335	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
DYL72_20350	COG2146	nitrite reductase [NAD(P)H] activity
DYL72_20355	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
DYL72_20360	COG3328	transposase activity
DYL72_20390	COG2425	protein containing a von Willebrand factor type A (vWA) domain
DYL72_20405	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
DYL72_20415	COG0513	Belongs to the DEAD box helicase family
DYL72_20420	COG0814	amino acid
DYL72_20430	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
DYL72_20435	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
DYL72_20445	COG1984	allophanate hydrolase subunit 2
DYL72_20455	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
DYL72_20460	COG4181	ATPase activity
DYL72_20470	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
DYL72_20475	COG1716	ATPase activity
DYL72_20475	COG5001	Diguanylate cyclase
DYL72_20485	COG0484	heat shock protein binding
DYL72_20520	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DYL72_20545	COG0010	Belongs to the arginase family
DYL72_20550	COG1166	arginine decarboxylase activity
DYL72_20565	COG4176	ABC-type proline glycine betaine transport system permease component
DYL72_20570	COG3344	reverse transcriptase
DYL72_20575	COG2113	Glycine betaine
DYL72_20590	COG2239	Acts as a magnesium transporter
DYL72_20595	COG0527	aspartate kinase activity
DYL72_20600	COG0662	Cupin 2, conserved barrel domain protein
DYL72_20605	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
DYL72_20610	COG0456	acetyltransferase
DYL72_20620	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
DYL72_20655	COG3335	DDE superfamily endonuclease
DYL72_20665	COG0366	Alpha amylase catalytic
DYL72_20685	COG0714	Associated with various cellular activities
DYL72_20720	COG3706	GGDEF domain
DYL72_20730	COG1403	HNH endonuclease
DYL72_20735	COG3530	Putative quorum-sensing-regulated virulence factor
DYL72_20740	COG1368	sulfuric ester hydrolase activity
DYL72_20750	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
DYL72_20790	COG1063	alcohol dehydrogenase
DYL72_20795	COG0156	8-amino-7-oxononanoate synthase activity
DYL72_20805	COG0346	lactoylglutathione lyase activity
DYL72_20820	COG2197	response regulator
DYL72_20825	COG3851	Histidine kinase
DYL72_20830	COG2271	Major facilitator Superfamily
DYL72_20865	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
DYL72_20870	COG0640	Transcriptional regulator
DYL72_20875	COG0798	PFAM Bile acid sodium symporter
DYL72_20880	COG0640	Transcriptional regulator
DYL72_20885	COG0659	secondary active sulfate transmembrane transporter activity
DYL72_20890	COG0589	response to stress
DYL72_20915	COG4977	sequence-specific DNA binding
DYL72_20915	COG1917	Cupin 2, conserved barrel domain protein
DYL72_20920	COG4771	TonB-dependent receptor
DYL72_20925	COG2814	Major facilitator Superfamily
DYL72_20930	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DYL72_20930	COG2226	methyltransferase
DYL72_20930	COG3433	isochorismatase activity
DYL72_20955	COG1021	2,3-dihydroxybenzoate-AMP ligase
DYL72_20960	COG1132	(ABC) transporter
DYL72_20965	COG1132	(ABC) transporter
DYL72_21040	COG3335	DDE superfamily endonuclease
DYL72_21045	COG1196	nuclear chromosome segregation
DYL72_21050	COG0732	type I restriction modification DNA specificity domain
DYL72_21055	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
DYL72_21065	COG2204	response regulator
DYL72_21115	COG3501	Rhs element vgr protein
DYL72_21165	COG0516	GMP reductase activity
DYL72_21170	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DYL72_21195	COG1278	Cold shock
DYL72_21200	COG4681	YaeQ
DYL72_21205	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DYL72_21205	COG1017	nitric oxide dioxygenase activity
DYL72_21210	COG3604	Transcriptional regulator
DYL72_21230	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DYL72_21235	COG3217	Mosc domain protein beta barrel domain protein
DYL72_21235	COG0633	Ferredoxin
DYL72_21245	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DYL72_21250	COG2354	Protein conserved in bacteria
DYL72_21275	COG3706	GGDEF domain
DYL72_21280	COG1349	DNA-binding transcription factor activity
DYL72_21310	COG1175	transmembrane transport
DYL72_21325	COG3842	ATPase activity
DYL72_21335	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DYL72_21340	COG3335	DDE superfamily endonuclease
DYL72_21345	COG0784	Response regulator, receiver
DYL72_21345	COG0835	chemotaxis
DYL72_21350	COG2315	Protein conserved in bacteria
DYL72_21355	COG3335	DDE superfamily endonuclease
DYL72_21360	COG3706	GGDEF domain
DYL72_21395	COG5001	Diguanylate cyclase
DYL72_21405	COG1741	Belongs to the pirin family
DYL72_21425	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
DYL72_21435	COG0765	amino acid transport
DYL72_21440	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DYL72_21445	COG0765	amino acid transport
DYL72_21450	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DYL72_21470	COG0179	Fumarylacetoacetate (FAA) hydrolase
DYL72_21495	COG2814	Major facilitator Superfamily
DYL72_21500	COG0583	DNA-binding transcription factor activity
DYL72_21850	COG1797	cobyrinic acid a,c-diamide synthase activity