locus-tag class description CEJ46_00005 PF00258 Flavodoxin CEJ46_00010 PF01926 50S ribosome-binding GTPase CEJ46_00010 PF12631 MnmE helical domain CEJ46_00010 PF10396 GTP-binding protein TrmE N-terminus CEJ46_00015 PF02096 60Kd inner membrane protein CEJ46_00015 PF14849 YidC periplasmic domain CEJ46_00020 PF01809 Putative membrane protein insertion efficiency factor CEJ46_00025 PF00825 Ribonuclease P CEJ46_00030 PF00468 Ribosomal protein L34 CEJ46_00035 PF00005 ABC transporter CEJ46_00040 PF00528 Binding-protein-dependent transport system inner membrane component CEJ46_00045 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEJ46_00050 PF08299 Bacterial dnaA protein helix-turn-helix CEJ46_00050 PF11638 DnaA N-terminal domain CEJ46_00050 PF00308 Bacterial dnaA protein CEJ46_00055 PF00712 DNA polymerase III beta subunit, N-terminal domain CEJ46_00055 PF02767 DNA polymerase III beta subunit, central domain CEJ46_00055 PF02768 DNA polymerase III beta subunit, C-terminal domain CEJ46_00060 PF02463 RecF/RecN/SMC N terminal domain CEJ46_00065 PF00204 DNA gyrase B CEJ46_00065 PF18053 DNA gyrase B subunit insert domain CEJ46_00065 PF01751 Toprim domain CEJ46_00065 PF00986 DNA gyrase B subunit, carboxyl terminus CEJ46_00065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ46_00080 PF00011 Hsp20/alpha crystallin family CEJ46_00085 PF00155 Aminotransferase class I and II CEJ46_00090 PF05746 DALR anticodon binding domain CEJ46_00090 PF02092 Glycyl-tRNA synthetase beta subunit CEJ46_00095 PF02091 Glycyl-tRNA synthetase alpha subunit CEJ46_00100 PF01169 Uncharacterized protein family UPF0016 CEJ46_00110 PF01206 Sulfurtransferase TusA CEJ46_00120 PF03466 LysR substrate binding domain CEJ46_00120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ46_00125 PF08240 Alcohol dehydrogenase GroES-like domain CEJ46_00125 PF00107 Zinc-binding dehydrogenase CEJ46_00130 PF00585 C-terminal regulatory domain of Threonine dehydratase CEJ46_00130 PF00291 Pyridoxal-phosphate dependent enzyme CEJ46_00135 PF00920 Dehydratase family CEJ46_00140 PF01063 Amino-transferase class IV CEJ46_00150 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CEJ46_00150 PF00205 Thiamine pyrophosphate enzyme, central domain CEJ46_00150 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CEJ46_00155 PF01078 Magnesium chelatase, subunit ChlI CEJ46_00155 PF13335 Magnesium chelatase, subunit ChlI C-terminal CEJ46_00175 PF02899 Phage integrase, N-terminal SAM-like domain CEJ46_00175 PF00589 Phage integrase family CEJ46_00180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ46_00180 PF12729 Four helix bundle sensory module for signal transduction CEJ46_00180 PF00672 HAMP domain CEJ46_00185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ46_00185 PF00672 HAMP domain CEJ46_00185 PF12729 Four helix bundle sensory module for signal transduction CEJ46_00195 PF13358 DDE superfamily endonuclease CEJ46_00200 PF00563 EAL domain CEJ46_00200 PF00990 Diguanylate cyclase, GGDEF domain CEJ46_00200 PF03707 Bacterial signalling protein N terminal repeat CEJ46_00210 PF01117 Aerolysin toxin CEJ46_00210 PF03440 Aerolysin/Pertussis toxin (APT) domain CEJ46_00215 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CEJ46_00225 PF13335 Magnesium chelatase, subunit ChlI C-terminal CEJ46_00225 PF01078 Magnesium chelatase, subunit ChlI CEJ46_00235 PF01323 DSBA-like thioredoxin domain CEJ46_00240 PF01636 Phosphotransferase enzyme family CEJ46_00245 PF13746 4Fe-4S dicluster domain CEJ46_00245 PF12801 4Fe-4S binding domain CEJ46_00245 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase CEJ46_00255 PF06288 Protein of unknown function (DUF1040) CEJ46_00265 PF03006 Haemolysin-III related CEJ46_00275 PF02386 Cation transport protein CEJ46_00280 PF02080 TrkA-C domain CEJ46_00280 PF02254 TrkA-N domain CEJ46_00285 PF01189 16S rRNA methyltransferase RsmB/F CEJ46_00285 PF01029 NusB family CEJ46_00290 PF02911 Formyl transferase, C-terminal domain CEJ46_00290 PF00551 Formyl transferase CEJ46_00295 PF01327 Polypeptide deformylase CEJ46_00300 PF01476 LysM domain CEJ46_00305 PF02481 DNA recombination-mediator protein A CEJ46_00305 PF17782 DprA winged helix domain CEJ46_00310 PF04361 Protein of unknown function (DUF494) CEJ46_00315 PF01396 Topoisomerase DNA binding C4 zinc finger CEJ46_00320 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CEJ46_00320 PF02222 ATP-grasp domain CEJ46_00325 PF00731 AIR carboxylase CEJ46_00330 PF01300 Telomere recombination CEJ46_00335 PF01218 Coproporphyrinogen III oxidase CEJ46_00340 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CEJ46_00340 PF08501 Shikimate dehydrogenase substrate binding domain CEJ46_00340 PF01488 Shikimate / quinate 5-dehydrogenase CEJ46_00345 PF07369 Protein of unknown function (DUF1488) CEJ46_00350 PF00132 Bacterial transferase hexapeptide (six repeats) CEJ46_00390 PF01797 Transposase IS200 like CEJ46_00395 PF07219 HemY protein N-terminus CEJ46_00400 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase CEJ46_00405 PF02602 Uroporphyrinogen-III synthase HemD CEJ46_00410 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CEJ46_00410 PF03900 Porphobilinogen deaminase, C-terminal domain CEJ46_00415 PF12633 Adenylate cyclase NT domain CEJ46_00415 PF01295 Adenylate cyclase, class-I CEJ46_00420 PF01491 Frataxin-like domain CEJ46_00430 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CEJ46_00430 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CEJ46_00435 PF01678 Diaminopimelate epimerase CEJ46_00445 PF00589 Phage integrase family CEJ46_00445 PF02899 Phage integrase, N-terminal SAM-like domain CEJ46_00450 PF13419 Haloacid dehalogenase-like hydrolase CEJ46_00470 PF12146 Serine aminopeptidase, S33 CEJ46_00475 PF01810 LysE type translocator CEJ46_00480 PF00563 EAL domain CEJ46_00480 PF08668 HDOD domain CEJ46_00485 PF00210 Ferritin-like domain CEJ46_00515 PF01914 MarC family integral membrane protein CEJ46_00530 PF00448 SRP54-type protein, GTPase domain CEJ46_00530 PF02881 SRP54-type protein, helical bundle domain CEJ46_00535 PF00005 ABC transporter CEJ46_00540 PF18075 FtsX extracellular domain CEJ46_00545 PF00140 Sigma-70 factor, region 1.2 CEJ46_00545 PF04542 Sigma-70 region 2 CEJ46_00545 PF04545 Sigma-70, region 4 CEJ46_00550 PF00581 Rhodanese-like domain CEJ46_00555 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease CEJ46_00555 PF01694 Rhomboid family CEJ46_00560 PF03748 Flagellar basal body-associated protein FliL CEJ46_00565 PF04345 Chorismate lyase CEJ46_00570 PF01040 UbiA prenyltransferase family CEJ46_00575 PF01553 Acyltransferase CEJ46_00580 PF00717 Peptidase S24-like CEJ46_00580 PF01726 LexA DNA binding domain CEJ46_00590 PF01554 MatE CEJ46_00600 PF00440 Bacterial regulatory proteins, tetR family CEJ46_00605 PF07226 Protein of unknown function (DUF1422) CEJ46_00610 PF00703 Glycosyl hydrolases family 2 CEJ46_00610 PF02929 Beta galactosidase small chain CEJ46_00610 PF02837 Glycosyl hydrolases family 2, sugar binding domain CEJ46_00610 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CEJ46_00610 PF16353 Domain of unknown function(DUF4981) CEJ46_00620 PF05958 tRNA (Uracil-5-)-methyltransferase CEJ46_00625 PF00593 TonB dependent receptor CEJ46_00625 PF07715 TonB-dependent Receptor Plug Domain CEJ46_00635 PF01177 Asp/Glu/Hydantoin racemase CEJ46_00710 PF00962 Adenosine/AMP deaminase CEJ46_00715 PF03707 Bacterial signalling protein N terminal repeat CEJ46_00715 PF00990 Diguanylate cyclase, GGDEF domain CEJ46_00715 PF00563 EAL domain CEJ46_00715 PF13188 PAS domain CEJ46_00720 PF00072 Response regulator receiver domain CEJ46_00720 PF02954 Bacterial regulatory protein, Fis family CEJ46_00720 PF00158 Sigma-54 interaction domain CEJ46_00725 PF00989 PAS fold CEJ46_00725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ46_00725 PF00512 His Kinase A (phospho-acceptor) domain CEJ46_00735 PF03951 Glutamine synthetase, beta-Grasp domain CEJ46_00735 PF00120 Glutamine synthetase, catalytic domain CEJ46_00750 PF02580 D-Tyr-tRNA(Tyr) deacylase CEJ46_00755 PF09500 Putative thioesterase (yiiD_Cterm) CEJ46_00755 PF00583 Acetyltransferase (GNAT) family CEJ46_00765 PF01293 Phosphoenolpyruvate carboxykinase CEJ46_00770 PF01430 Hsp33 protein CEJ46_00775 PF01479 S4 domain CEJ46_00780 PF11356 Type II secretion system protein C CEJ46_00785 PF00263 Bacterial type II and III secretion system protein CEJ46_00785 PF03958 Bacterial type II/III secretion system short domain CEJ46_00790 PF00437 Type II/IV secretion system protein CEJ46_00795 PF00482 Type II secretion system (T2SS), protein F CEJ46_00800 PF07963 Prokaryotic N-terminal methylation motif CEJ46_00800 PF08334 Type II secretion system (T2SS), protein G CEJ46_00805 PF12019 Type II transport protein GspH CEJ46_00810 PF02501 Type II secretion system (T2SS), protein I CEJ46_00810 PF07963 Prokaryotic N-terminal methylation motif CEJ46_00815 PF11612 Type II secretion system (T2SS), protein J CEJ46_00815 PF07963 Prokaryotic N-terminal methylation motif CEJ46_00820 PF03934 Type II secretion system (T2SS), protein K CEJ46_00825 PF12693 GspL periplasmic domain CEJ46_00825 PF05134 Type II secretion system (T2SS), protein L CEJ46_00830 PF04612 Type II secretion system (T2SS), protein M CEJ46_00835 PF01203 Type II secretion system (T2SS), protein N CEJ46_00840 PF00459 Inositol monophosphatase family CEJ46_00845 PF00293 NUDIX domain CEJ46_00850 PF01106 NifU-like domain CEJ46_00850 PF01521 Iron-sulphur cluster biosynthesis CEJ46_00855 PF00156 Phosphoribosyl transferase domain CEJ46_00860 PF00561 alpha/beta hydrolase fold CEJ46_00870 PF00575 S1 RNA binding domain CEJ46_00870 PF09371 Tex-like protein N-terminal domain CEJ46_00870 PF17674 HHH domain CEJ46_00870 PF16921 Tex protein YqgF-like domain CEJ46_00875 PF01272 Transcription elongation factor, GreA/GreB, C-term CEJ46_00875 PF03449 Transcription elongation factor, N-terminal CEJ46_00885 PF06942 GlpM protein CEJ46_00895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ46_00895 PF03466 LysR substrate binding domain CEJ46_00905 PF00881 Nitroreductase family CEJ46_00915 PF00072 Response regulator receiver domain CEJ46_00915 PF00486 Transcriptional regulatory protein, C terminal CEJ46_00920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ46_00920 PF00512 His Kinase A (phospho-acceptor) domain CEJ46_00920 PF00672 HAMP domain CEJ46_00925 PF00860 Permease family CEJ46_00930 PF17191 RecG wedge domain CEJ46_00930 PF00270 DEAD/DEAH box helicase CEJ46_00930 PF00271 Helicase conserved C-terminal domain CEJ46_00935 PF02824 TGS domain CEJ46_00935 PF04607 Region found in RelA / SpoT proteins CEJ46_00935 PF13291 ACT domain CEJ46_00940 PF01192 RNA polymerase Rpb6 CEJ46_00945 PF00625 Guanylate kinase CEJ46_00950 PF02592 Putative vitamin uptake transporter CEJ46_00955 PF02541 Ppx/GppA phosphatase family CEJ46_00960 PF00271 Helicase conserved C-terminal domain CEJ46_00960 PF00270 DEAD/DEAH box helicase CEJ46_00965 PF00085 Thioredoxin CEJ46_00970 PF07497 Rho termination factor, RNA-binding domain CEJ46_00970 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CEJ46_00970 PF07498 Rho termination factor, N-terminal domain CEJ46_00980 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CEJ46_00985 PF00175 Oxidoreductase NAD-binding domain CEJ46_00985 PF00111 2Fe-2S iron-sulfur cluster binding domain CEJ46_00985 PF00970 Oxidoreductase FAD-binding domain CEJ46_00990 PF00175 Oxidoreductase NAD-binding domain CEJ46_01030 PF13091 PLD-like domain CEJ46_01040 PF01565 FAD binding domain CEJ46_01040 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CEJ46_01045 PF08279 HTH domain CEJ46_01045 PF02237 Biotin protein ligase C terminal domain CEJ46_01045 PF03099 Biotin/lipoate A/B protein ligase family CEJ46_01050 PF00485 Phosphoribulokinase / Uridine kinase family CEJ46_01075 PF00009 Elongation factor Tu GTP binding domain CEJ46_01075 PF03144 Elongation factor Tu domain 2 CEJ46_01075 PF03143 Elongation factor Tu C-terminal domain CEJ46_01080 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CEJ46_01085 PF00467 KOW motif CEJ46_01085 PF02357 Transcription termination factor nusG CEJ46_01090 PF00298 Ribosomal protein L11, RNA binding domain CEJ46_01090 PF03946 Ribosomal protein L11, N-terminal domain CEJ46_01095 PF00687 Ribosomal protein L1p/L10e family CEJ46_01100 PF00466 Ribosomal protein L10 CEJ46_01105 PF00542 Ribosomal protein L7/L12 C-terminal domain CEJ46_01105 PF16320 Ribosomal protein L7/L12 dimerisation domain CEJ46_01110 PF10385 RNA polymerase beta subunit external 1 domain CEJ46_01110 PF00562 RNA polymerase Rpb2, domain 6 CEJ46_01110 PF04565 RNA polymerase Rpb2, domain 3 CEJ46_01110 PF04563 RNA polymerase beta subunit CEJ46_01110 PF04561 RNA polymerase Rpb2, domain 2 CEJ46_01110 PF04560 RNA polymerase Rpb2, domain 7 CEJ46_01115 PF04998 RNA polymerase Rpb1, domain 5 CEJ46_01115 PF00623 RNA polymerase Rpb1, domain 2 CEJ46_01115 PF05000 RNA polymerase Rpb1, domain 4 CEJ46_01115 PF04983 RNA polymerase Rpb1, domain 3 CEJ46_01115 PF04997 RNA polymerase Rpb1, domain 1 CEJ46_01120 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ CEJ46_01125 PF00293 NUDIX domain CEJ46_01125 PF09297 NADH pyrophosphatase zinc ribbon domain CEJ46_01130 PF01208 Uroporphyrinogen decarboxylase (URO-D) CEJ46_01135 PF08360 QacR-like protein, C-terminal region CEJ46_01135 PF00440 Bacterial regulatory proteins, tetR family CEJ46_01145 PF01551 Peptidase family M23 CEJ46_01150 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CEJ46_01150 PF01676 Metalloenzyme superfamily CEJ46_01160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ46_01160 PF02743 Cache domain CEJ46_01160 PF00672 HAMP domain CEJ46_01165 PF03600 Citrate transporter CEJ46_01165 PF02080 TrkA-C domain CEJ46_01170 PF02666 Phosphatidylserine decarboxylase CEJ46_01175 PF03193 RsgA GTPase CEJ46_01180 PF00929 Exonuclease CEJ46_01230 PF08331 Domain of unknown function (DUF1730) CEJ46_01235 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CEJ46_01240 PF01520 N-acetylmuramoyl-L-alanine amidase CEJ46_01245 PF01119 DNA mismatch repair protein, C-terminal domain CEJ46_01245 PF08676 MutL C terminal dimerisation domain CEJ46_01255 PF17209 Hfq protein CEJ46_01260 PF01926 50S ribosome-binding GTPase CEJ46_01260 PF13167 GTP-binding GTPase N-terminal CEJ46_01260 PF16360 GTP-binding GTPase Middle Region CEJ46_01265 PF12221 Bacterial membrane protein N terminal CEJ46_01265 PF01145 SPFH domain / Band 7 family CEJ46_01270 PF01145 SPFH domain / Band 7 family CEJ46_01275 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) CEJ46_01280 PF04102 SlyX CEJ46_01290 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CEJ46_01290 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CEJ46_01295 PF08348 YheO-like PAS domain CEJ46_01295 PF13309 HTH domain CEJ46_01300 PF02635 DsrE/DsrF-like family CEJ46_01305 PF02635 DsrE/DsrF-like family CEJ46_01310 PF04077 DsrH like protein CEJ46_01315 PF00164 Ribosomal protein S12/S23 CEJ46_01320 PF00177 Ribosomal protein S7p/S5e CEJ46_01325 PF14492 Elongation Factor G, domain II CEJ46_01325 PF00679 Elongation factor G C-terminus CEJ46_01325 PF03764 Elongation factor G, domain IV CEJ46_01325 PF00009 Elongation factor Tu GTP binding domain CEJ46_01325 PF03144 Elongation factor Tu domain 2 CEJ46_01330 PF00009 Elongation factor Tu GTP binding domain CEJ46_01330 PF03143 Elongation factor Tu C-terminal domain CEJ46_01330 PF03144 Elongation factor Tu domain 2 CEJ46_01335 PF01250 Ribosomal protein S6 CEJ46_01340 PF00436 Single-strand binding protein family CEJ46_01345 PF01084 Ribosomal protein S18 CEJ46_01350 PF03948 Ribosomal protein L9, C-terminal domain CEJ46_01350 PF01281 Ribosomal protein L9, N-terminal domain CEJ46_01360 PF03796 DnaB-like helicase C terminal domain CEJ46_01360 PF00772 DnaB-like helicase N terminal domain CEJ46_01365 PF00842 Alanine racemase, C-terminal domain CEJ46_01365 PF01168 Alanine racemase, N-terminal domain CEJ46_01370 PF00342 Phosphoglucose isomerase CEJ46_01380 PF01475 Ferric uptake regulator family CEJ46_01385 PF01207 Dihydrouridine synthase (Dus) CEJ46_01405 PF00175 Oxidoreductase NAD-binding domain CEJ46_01405 PF00258 Flavodoxin CEJ46_01405 PF00667 FAD binding domain CEJ46_01410 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CEJ46_01410 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CEJ46_01415 PF01507 Phosphoadenosine phosphosulfate reductase family CEJ46_01495 PF00999 Sodium/hydrogen exchanger family CEJ46_01500 PF02607 B12 binding domain CEJ46_01500 PF02965 Vitamin B12 dependent methionine synthase, activation domain CEJ46_01500 PF02310 B12 binding domain CEJ46_01500 PF00809 Pterin binding enzyme CEJ46_01500 PF02574 Homocysteine S-methyltransferase CEJ46_01505 PF01842 ACT domain CEJ46_01505 PF00696 Amino acid kinase family CEJ46_01510 PF00266 Aminotransferase class-V CEJ46_01525 PF01769 Divalent cation transporter CEJ46_01525 PF03448 MgtE intracellular N domain CEJ46_01525 PF00571 CBS domain CEJ46_01535 PF00005 ABC transporter CEJ46_01535 PF17760 UvrA interaction domain CEJ46_01535 PF17755 UvrA DNA-binding domain CEJ46_01540 PF00483 Nucleotidyl transferase CEJ46_01545 PF00196 Bacterial regulatory proteins, luxR family CEJ46_01550 PF00436 Single-strand binding protein family CEJ46_01555 PF17157 Gammaproteobacterial periplasmic sensor domain CEJ46_01555 PF00563 EAL domain CEJ46_01555 PF00990 Diguanylate cyclase, GGDEF domain CEJ46_01575 PF00263 Bacterial type II and III secretion system protein CEJ46_01575 PF03958 Bacterial type II/III secretion system short domain CEJ46_01580 PF01471 Putative peptidoglycan binding domain CEJ46_01580 PF13401 AAA domain CEJ46_01590 PF00437 Type II/IV secretion system protein CEJ46_01590 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CEJ46_01595 PF00482 Type II secretion system (T2SS), protein F CEJ46_01605 PF00114 Pilin (bacterial filament) CEJ46_01605 PF07963 Prokaryotic N-terminal methylation motif CEJ46_01645 PF04085 rod shape-determining protein MreC CEJ46_01650 PF04093 rod shape-determining protein MreD CEJ46_01655 PF02545 Maf-like protein CEJ46_01660 PF10150 Ribonuclease E/G family CEJ46_01660 PF00575 S1 RNA binding domain CEJ46_01665 PF13502 AsmA-like C-terminal region CEJ46_01665 PF13116 Protein of unknown function CEJ46_01670 PF00795 Carbon-nitrogen hydrolase CEJ46_01675 PF01523 Putative modulator of DNA gyrase CEJ46_01685 PF06877 Regulator of ribonuclease activity B CEJ46_01715 PF13358 DDE superfamily endonuclease CEJ46_01750 PF05598 Transposase domain (DUF772) CEJ46_01750 PF01609 Transposase DDE domain CEJ46_01755 PF13289 SIR2-like domain CEJ46_01770 PF00582 Universal stress protein family CEJ46_01780 PF16868 NMT1-like family CEJ46_01795 PF00056 lactate/malate dehydrogenase, NAD binding domain CEJ46_01795 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CEJ46_01800 PF13520 Amino acid permease CEJ46_01805 PF00348 Polyprenyl synthetase CEJ46_01820 PF01016 Ribosomal L27 protein CEJ46_01825 PF01018 GTP1/OBG CEJ46_01825 PF01926 50S ribosome-binding GTPase CEJ46_01830 PF06738 Putative threonine/serine exporter CEJ46_01835 PF12821 Threonine/Serine exporter, ThrE CEJ46_01840 PF00186 Dihydrofolate reductase CEJ46_01845 PF00149 Calcineurin-like phosphoesterase CEJ46_01850 PF04379 ApaG domain CEJ46_01855 PF00398 Ribosomal RNA adenine dimethylase CEJ46_01860 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CEJ46_01865 PF09312 SurA N-terminal domain CEJ46_01870 PF03968 OstA-like protein CEJ46_01870 PF04453 LPS transport system D CEJ46_01875 PF05099 Tellurite resistance protein TerB CEJ46_01875 PF00226 DnaJ domain CEJ46_01925 PF01464 Transglycosylase SLT domain CEJ46_01925 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CEJ46_01930 PF04362 Bacterial Fe(2+) trafficking CEJ46_01935 PF00730 HhH-GPD superfamily base excision DNA repair protein CEJ46_01935 PF00633 Helix-hairpin-helix motif CEJ46_01935 PF14815 NUDIX domain CEJ46_01940 PF13542 Helix-turn-helix domain of transposase family ISL3 CEJ46_01940 PF01610 Transposase CEJ46_01940 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CEJ46_01945 PF00440 Bacterial regulatory proteins, tetR family CEJ46_01960 PF01610 Transposase CEJ46_01960 PF13542 Helix-turn-helix domain of transposase family ISL3 CEJ46_01960 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CEJ46_01980 PF04227 Indigoidine synthase A like protein CEJ46_01990 PF01047 MarR family CEJ46_02000 PF00892 EamA-like transporter family CEJ46_02010 PF01361 Tautomerase enzyme CEJ46_02015 PF13419 Haloacid dehalogenase-like hydrolase CEJ46_02025 PF00730 HhH-GPD superfamily base excision DNA repair protein CEJ46_02025 PF14815 NUDIX domain CEJ46_02030 PF02390 Putative methyltransferase CEJ46_02035 PF04960 Glutaminase CEJ46_02040 PF06969 HemN C-terminal domain CEJ46_02040 PF04055 Radical SAM superfamily CEJ46_02045 PF01725 Ham1 family CEJ46_02055 PF02594 Uncharacterised ACR, YggU family COG1872 CEJ46_02060 PF02325 YGGT family CEJ46_02065 PF14748 Pyrroline-5-carboxylate reductase dimerisation CEJ46_02065 PF03807 NADP oxidoreductase coenzyme F420-dependent CEJ46_02070 PF01168 Alanine racemase, N-terminal domain CEJ46_02075 PF00437 Type II/IV secretion system protein CEJ46_02080 PF00437 Type II/IV secretion system protein CEJ46_02085 PF03652 Holliday junction resolvase CEJ46_02090 PF02622 Uncharacterized ACR, COG1678 CEJ46_02095 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CEJ46_02095 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CEJ46_02100 PF04452 RNA methyltransferase CEJ46_02105 PF04231 Endonuclease I CEJ46_02110 PF10263 SprT-like family CEJ46_02110 PF17283 SprT-like zinc ribbon domain CEJ46_02115 PF02772 S-adenosylmethionine synthetase, central domain CEJ46_02115 PF02773 S-adenosylmethionine synthetase, C-terminal domain CEJ46_02115 PF00438 S-adenosylmethionine synthetase, N-terminal domain CEJ46_02120 PF00456 Transketolase, thiamine diphosphate binding domain CEJ46_02120 PF02779 Transketolase, pyrimidine binding domain CEJ46_02120 PF02780 Transketolase, C-terminal domain CEJ46_02125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ46_02125 PF03466 LysR substrate binding domain CEJ46_02130 PF07715 TonB-dependent Receptor Plug Domain CEJ46_02130 PF00593 TonB dependent receptor CEJ46_02135 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CEJ46_02135 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CEJ46_02140 PF00162 Phosphoglycerate kinase CEJ46_02150 PF01116 Fructose-bisphosphate aldolase class-II CEJ46_02155 PF05552 Conserved TM helix CEJ46_02155 PF00924 Mechanosensitive ion channel CEJ46_02160 PF01810 LysE type translocator CEJ46_02165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ46_02165 PF03466 LysR substrate binding domain CEJ46_02175 PF00990 Diguanylate cyclase, GGDEF domain CEJ46_02175 PF17158 Membrane-associated sensor, integral membrane domain CEJ46_02180 PF00224 Pyruvate kinase, barrel domain CEJ46_02180 PF02887 Pyruvate kinase, alpha/beta domain CEJ46_02185 PF08220 DeoR-like helix-turn-helix domain CEJ46_02185 PF00455 DeoR C terminal sensor domain CEJ46_02190 PF01380 SIS domain CEJ46_02195 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CEJ46_02230 PF08721 TnsA endonuclease C terminal CEJ46_02230 PF08722 TnsA endonuclease N terminal CEJ46_02235 PF00665 Integrase core domain CEJ46_02240 PF13401 AAA domain CEJ46_02240 PF11426 Tn7 transposition regulator TnsC CEJ46_02245 PF15978 Tn7-like transposition protein D CEJ46_02245 PF06527 TniQ CEJ46_02250 PF18623 TnsE C-terminal domain CEJ46_02270 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEJ46_02270 PF00512 His Kinase A (phospho-acceptor) domain CEJ46_02270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ46_02285 PF00472 RF-1 domain CEJ46_02290 PF05638 Type VI secretion system effector, Hcp CEJ46_02295 PF16671 Actin cross-linking domain CEJ46_02295 PF04717 Type VI secretion system, phage-baseplate injector CEJ46_02325 PF00082 Subtilase family CEJ46_02360 PF00075 RNase H CEJ46_02380 PF01810 LysE type translocator CEJ46_02445 PF04002 RadC-like JAB domain CEJ46_02460 PF00176 SNF2 family N-terminal domain CEJ46_02460 PF00271 Helicase conserved C-terminal domain CEJ46_02470 PF01555 DNA methylase CEJ46_02485 PF13356 Arm DNA-binding domain CEJ46_02485 PF00589 Phage integrase family CEJ46_02495 PF04546 Sigma-70, non-essential region CEJ46_02495 PF03979 Sigma-70 factor, region 1.1 CEJ46_02495 PF00140 Sigma-70 factor, region 1.2 CEJ46_02495 PF04539 Sigma-70 region 3 CEJ46_02495 PF04545 Sigma-70, region 4 CEJ46_02495 PF04542 Sigma-70 region 2 CEJ46_02500 PF01807 CHC2 zinc finger CEJ46_02500 PF08275 DNA primase catalytic core, N-terminal domain CEJ46_02500 PF10410 DnaB-helicase binding domain of primase CEJ46_02500 PF08278 DNA primase DnaG DnaB-binding CEJ46_02505 PF09424 Yqey-like protein CEJ46_02525 PF02660 Glycerol-3-phosphate acyltransferase CEJ46_02530 PF02152 Dihydroneopterin aldolase CEJ46_02535 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CEJ46_02540 PF02673 Bacitracin resistance protein BacA CEJ46_02545 PF04977 Septum formation initiator CEJ46_02550 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CEJ46_02555 PF02542 YgbB family CEJ46_02560 PF01142 tRNA pseudouridine synthase D (TruD) CEJ46_02565 PF01975 Survival protein SurE CEJ46_02575 PF01551 Peptidase family M23 CEJ46_02575 PF01476 LysM domain CEJ46_02580 PF04545 Sigma-70, region 4 CEJ46_02580 PF04539 Sigma-70 region 3 CEJ46_02580 PF04542 Sigma-70 region 2 CEJ46_02580 PF00140 Sigma-70 factor, region 1.2 CEJ46_02585 PF01624 MutS domain I CEJ46_02585 PF05188 MutS domain II CEJ46_02585 PF05192 MutS domain III CEJ46_02585 PF05190 MutS family domain IV CEJ46_02585 PF00488 MutS domain V CEJ46_02590 PF00291 Pyridoxal-phosphate dependent enzyme CEJ46_02600 PF00528 Binding-protein-dependent transport system inner membrane component CEJ46_02605 PF00528 Binding-protein-dependent transport system inner membrane component CEJ46_02610 PF12857 TOBE-like domain CEJ46_02610 PF00005 ABC transporter CEJ46_02615 PF02464 Competence-damaged protein CEJ46_02620 PF00154 recA bacterial DNA recombination protein CEJ46_02625 PF02631 RecX family CEJ46_02630 PF02272 DHHA1 domain CEJ46_02630 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CEJ46_02630 PF01411 tRNA synthetases class II (A) CEJ46_02635 PF13840 ACT domain CEJ46_02635 PF01842 ACT domain CEJ46_02635 PF00696 Amino acid kinase family CEJ46_02685 PF04277 Oxaloacetate decarboxylase, gamma chain CEJ46_02690 PF00364 Biotin-requiring enzyme CEJ46_02690 PF00682 HMGL-like CEJ46_02690 PF02436 Conserved carboxylase domain CEJ46_02695 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit CEJ46_02705 PF09335 SNARE associated Golgi protein CEJ46_02710 PF05193 Peptidase M16 inactive domain CEJ46_02710 PF00675 Insulinase (Peptidase family M16) CEJ46_02715 PF04262 Glutamate-cysteine ligase CEJ46_02725 PF01595 Cyclin M transmembrane N-terminal domain CEJ46_02725 PF03471 Transporter associated domain CEJ46_02725 PF00571 CBS domain CEJ46_02730 PF01578 Cytochrome C assembly protein CEJ46_02735 PF00448 SRP54-type protein, GTPase domain CEJ46_02735 PF02881 SRP54-type protein, helical bundle domain CEJ46_02735 PF02978 Signal peptide binding domain CEJ46_02750 PF01746 tRNA (Guanine-1)-methyltransferase CEJ46_02755 PF01245 Ribosomal protein L19 CEJ46_02760 PF03884 DNA gyrase inhibitor YacG CEJ46_02765 PF07072 Cell division protein CEJ46_02770 PF01121 Dephospho-CoA kinase CEJ46_02775 PF06750 Bacterial Peptidase A24 N-terminal domain CEJ46_02775 PF01478 Type IV leader peptidase family CEJ46_02780 PF00482 Type II secretion system (T2SS), protein F CEJ46_02785 PF00437 Type II/IV secretion system protein CEJ46_02785 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CEJ46_02790 PF07963 Prokaryotic N-terminal methylation motif CEJ46_02790 PF00114 Pilin (bacterial filament) CEJ46_02795 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CEJ46_02795 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CEJ46_02800 PF01510 N-acetylmuramoyl-L-alanine amidase CEJ46_02805 PF00258 Flavodoxin CEJ46_02810 PF00589 Phage integrase family CEJ46_02810 PF02899 Phage integrase, N-terminal SAM-like domain CEJ46_02815 PF10411 Disulfide bond isomerase protein N-terminus CEJ46_02815 PF13098 Thioredoxin-like domain CEJ46_02820 PF01368 DHH family CEJ46_02820 PF17768 RecJ OB domain CEJ46_02820 PF02272 DHHA1 domain CEJ46_02825 PF00392 Bacterial regulatory proteins, gntR family CEJ46_02825 PF07729 FCD domain CEJ46_02830 PF00456 Transketolase, thiamine diphosphate binding domain CEJ46_02830 PF17831 Pyruvate dehydrogenase E1 component middle domain CEJ46_02835 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CEJ46_02835 PF00364 Biotin-requiring enzyme CEJ46_02835 PF02817 e3 binding domain CEJ46_02840 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEJ46_02840 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CEJ46_02845 PF00440 Bacterial regulatory proteins, tetR family CEJ46_02850 PF00156 Phosphoribosyl transferase domain CEJ46_02855 PF00484 Carbonic anhydrase CEJ46_02860 PF00916 Sulfate permease family CEJ46_02860 PF01740 STAS domain CEJ46_02865 PF00005 ABC transporter CEJ46_02870 PF01061 ABC-2 type transporter CEJ46_02875 PF14706 Transposase DNA-binding CEJ46_02875 PF02281 Transposase Tn5 dimerisation domain CEJ46_02875 PF01609 Transposase DDE domain CEJ46_02885 PF02569 Pantoate-beta-alanine ligase CEJ46_02890 PF02548 Ketopantoate hydroxymethyltransferase CEJ46_02895 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CEJ46_02900 PF12626 Polymerase A arginine-rich C-terminus CEJ46_02900 PF12627 Probable RNA and SrmB- binding site of polymerase A CEJ46_02900 PF01743 Poly A polymerase head domain CEJ46_02905 PF00749 tRNA synthetases class I (E and Q), catalytic domain CEJ46_02910 PF01258 Prokaryotic dksA/traR C4-type zinc finger CEJ46_02915 PF17746 SfsA N-terminal OB domain CEJ46_02915 PF03749 Sugar fermentation stimulation protein RE domain CEJ46_02920 PF08482 ATP-dependent helicase C-terminal CEJ46_02920 PF04408 Helicase associated domain (HA2) CEJ46_02920 PF00270 DEAD/DEAH box helicase CEJ46_02920 PF00271 Helicase conserved C-terminal domain CEJ46_02925 PF00905 Penicillin binding protein transpeptidase domain CEJ46_02925 PF00912 Transglycosylase CEJ46_02925 PF14814 Bifunctional transglycosylase second domain CEJ46_02930 PF01734 Patatin-like phospholipase CEJ46_02935 PF11791 Aconitate B N-terminal domain CEJ46_02935 PF06434 Aconitate hydratase 2 N-terminus CEJ46_02935 PF00330 Aconitase family (aconitate hydratase) CEJ46_02940 PF02595 Glycerate kinase family CEJ46_02945 PF02447 GntP family permease CEJ46_02950 PF13556 PucR C-terminal helix-turn-helix domain CEJ46_02950 PF17853 GGDEF-like domain CEJ46_02950 PF05651 Putative sugar diacid recognition CEJ46_02955 PF06062 Uncharacterised protein family (UPF0231) CEJ46_02960 PF00543 Nitrogen regulatory protein P-II CEJ46_02965 PF00909 Ammonium Transporter Family CEJ46_02970 PF13416 Bacterial extracellular solute-binding protein CEJ46_02980 PF08402 TOBE domain CEJ46_02980 PF00005 ABC transporter CEJ46_02985 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CEJ46_02985 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CEJ46_02985 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CEJ46_02990 PF06165 Glycosyltransferase family 36 CEJ46_02990 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain CEJ46_02995 PF02838 Glycosyl hydrolase family 20, domain 2 CEJ46_02995 PF00728 Glycosyl hydrolase family 20, catalytic domain CEJ46_03000 PF01869 BadF/BadG/BcrA/BcrD ATPase family CEJ46_03010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEJ46_03010 PF00005 ABC transporter CEJ46_03015 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEJ46_03015 PF00005 ABC transporter CEJ46_03020 PF00528 Binding-protein-dependent transport system inner membrane component CEJ46_03020 PF12911 N-terminal TM domain of oligopeptide transport permease C CEJ46_03025 PF00528 Binding-protein-dependent transport system inner membrane component CEJ46_03030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEJ46_03035 PF00072 Response regulator receiver domain CEJ46_03035 PF09308 LuxQ, periplasmic CEJ46_03035 PF00512 His Kinase A (phospho-acceptor) domain CEJ46_03035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ46_03040 PF08468 Methyltransferase small domain N-terminal CEJ46_03040 PF05175 Methyltransferase small domain CEJ46_03045 PF01594 AI-2E family transporter CEJ46_03050 PF00202 Aminotransferase class-III CEJ46_03055 PF01521 Iron-sulphur cluster biosynthesis CEJ46_03065 PF00873 AcrB/AcrD/AcrF family CEJ46_03070 PF01551 Peptidase family M23 CEJ46_03070 PF08525 Opacity-associated protein A N-terminal motif CEJ46_03070 PF01476 LysM domain CEJ46_03075 PF00579 tRNA synthetases class I (W and Y) CEJ46_03075 PF01479 S4 domain CEJ46_03085 PF01769 Divalent cation transporter CEJ46_03085 PF03448 MgtE intracellular N domain CEJ46_03085 PF00571 CBS domain CEJ46_03090 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CEJ46_03095 PF13609 Gram-negative porin CEJ46_03100 PF03449 Transcription elongation factor, N-terminal CEJ46_03100 PF01272 Transcription elongation factor, GreA/GreB, C-term CEJ46_03105 PF01985 CRS1 / YhbY (CRM) domain CEJ46_03110 PF01728 FtsJ-like methyltransferase CEJ46_03115 PF06480 FtsH Extracellular CEJ46_03115 PF17862 AAA+ lid domain CEJ46_03115 PF01434 Peptidase family M41 CEJ46_03115 PF00004 ATPase family associated with various cellular activities (AAA) CEJ46_03120 PF00809 Pterin binding enzyme CEJ46_03125 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CEJ46_03125 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CEJ46_03125 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CEJ46_03125 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CEJ46_03130 PF03840 Preprotein translocase SecG subunit CEJ46_03145 PF02576 RimP N-terminal domain CEJ46_03145 PF17384 RimP C-terminal SH3 domain CEJ46_03150 PF08529 NusA N-terminal domain CEJ46_03150 PF00575 S1 RNA binding domain CEJ46_03150 PF13184 NusA-like KH domain CEJ46_03155 PF04760 Translation initiation factor IF-2, N-terminal region CEJ46_03155 PF00009 Elongation factor Tu GTP binding domain CEJ46_03155 PF08364 Bacterial translation initiation factor IF-2 associated region CEJ46_03155 PF11987 Translation-initiation factor 2 CEJ46_03160 PF02033 Ribosome-binding factor A CEJ46_03165 PF09157 Pseudouridine synthase II TruB, C-terminal CEJ46_03165 PF01509 TruB family pseudouridylate synthase (N terminal domain) CEJ46_03165 PF16198 tRNA pseudouridylate synthase B C-terminal domain CEJ46_03170 PF00312 Ribosomal protein S15 CEJ46_03175 PF00013 KH domain CEJ46_03175 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CEJ46_03175 PF01138 3' exoribonuclease family, domain 1 CEJ46_03175 PF03725 3' exoribonuclease family, domain 2 CEJ46_03175 PF00575 S1 RNA binding domain CEJ46_03180 PF13181 Tetratricopeptide repeat CEJ46_03180 PF07719 Tetratricopeptide repeat CEJ46_03185 PF01047 MarR family CEJ46_03205 PF03707 Bacterial signalling protein N terminal repeat CEJ46_03205 PF00990 Diguanylate cyclase, GGDEF domain CEJ46_03205 PF00563 EAL domain CEJ46_03215 PF13508 Acetyltransferase (GNAT) domain CEJ46_03225 PF00583 Acetyltransferase (GNAT) family CEJ46_03230 PF03707 Bacterial signalling protein N terminal repeat CEJ46_03230 PF00990 Diguanylate cyclase, GGDEF domain CEJ46_03230 PF00563 EAL domain CEJ46_03235 PF00009 Elongation factor Tu GTP binding domain CEJ46_03235 PF16658 Class II release factor RF3, C-terminal domain CEJ46_03235 PF03144 Elongation factor Tu domain 2 CEJ46_03240 PF00271 Helicase conserved C-terminal domain CEJ46_03240 PF00270 DEAD/DEAH box helicase CEJ46_03245 PF05175 Methyltransferase small domain CEJ46_03250 PF05525 Branched-chain amino acid transport protein CEJ46_03260 PF00152 tRNA synthetases class II (D, K and N) CEJ46_03260 PF01336 OB-fold nucleic acid binding domain CEJ46_03265 PF00158 Sigma-54 interaction domain CEJ46_03265 PF02954 Bacterial regulatory protein, Fis family CEJ46_03265 PF00072 Response regulator receiver domain CEJ46_03275 PF00248 Aldo/keto reductase family CEJ46_03280 PF02976 DNA mismatch repair enzyme MutH CEJ46_03285 PF00293 NUDIX domain CEJ46_03290 PF00391 PEP-utilising enzyme, mobile domain CEJ46_03290 PF01590 GAF domain CEJ46_03290 PF05524 PEP-utilising enzyme, N-terminal CEJ46_03290 PF02896 PEP-utilising enzyme, TIM barrel domain CEJ46_03295 PF01925 Sulfite exporter TauE/SafE CEJ46_03300 PF01790 Prolipoprotein diacylglyceryl transferase CEJ46_03305 PF00303 Thymidylate synthase CEJ46_03310 PF02690 Na+/Pi-cotransporter CEJ46_03315 PF03466 LysR substrate binding domain CEJ46_03315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ46_03320 PF01022 Bacterial regulatory protein, arsR family CEJ46_03325 PF01649 Ribosomal protein S20 CEJ46_03330 PF03023 Lipid II flippase MurJ CEJ46_03335 PF01687 Riboflavin kinase CEJ46_03335 PF06574 FAD synthetase CEJ46_03340 PF08264 Anticodon-binding domain of tRNA CEJ46_03340 PF06827 Zinc finger found in FPG and IleRS CEJ46_03340 PF00133 tRNA synthetases class I (I, L, M and V) CEJ46_03345 PF01252 Signal peptidase (SPase) II CEJ46_03350 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CEJ46_03355 PF02401 LytB protein CEJ46_03360 PF02554 Carbon starvation protein CstA CEJ46_03370 PF13580 SIS domain CEJ46_03375 PF03702 Anhydro-N-acetylmuramic acid kinase CEJ46_03380 PF00933 Glycosyl hydrolase family 3 N terminal domain CEJ46_03385 PF04397 LytTr DNA-binding domain CEJ46_03385 PF00072 Response regulator receiver domain CEJ46_03390 PF06580 Histidine kinase CEJ46_03390 PF07694 5TMR of 5TMR-LYT CEJ46_03395 PF00793 DAHP synthetase I family CEJ46_03400 PF01817 Chorismate mutase type II CEJ46_03400 PF02153 Prephenate dehydrogenase CEJ46_03405 PF07238 PilZ domain CEJ46_03410 PF12848 ABC transporter CEJ46_03410 PF00005 ABC transporter CEJ46_03415 PF01464 Transglycosylase SLT domain CEJ46_03415 PF14718 Soluble lytic murein transglycosylase L domain CEJ46_03425 PF01931 Protein of unknown function DUF84 CEJ46_03430 PF00990 Diguanylate cyclase, GGDEF domain CEJ46_03430 PF00563 EAL domain CEJ46_03435 PF13416 Bacterial extracellular solute-binding protein CEJ46_03440 PF00800 Prephenate dehydratase CEJ46_03440 PF01817 Chorismate mutase type II CEJ46_03445 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CEJ46_03450 PF13525 Outer membrane lipoprotein CEJ46_03455 PF01479 S4 domain CEJ46_03455 PF00849 RNA pseudouridylate synthase CEJ46_03465 PF17871 AAA lid domain CEJ46_03465 PF07724 AAA domain (Cdc48 subfamily) CEJ46_03465 PF00004 ATPase family associated with various cellular activities (AAA) CEJ46_03465 PF10431 C-terminal, D2-small domain, of ClpB protein CEJ46_03465 PF02861 Clp amino terminal domain, pathogenicity island component CEJ46_03505 PF00881 Nitroreductase family CEJ46_03510 PF00037 4Fe-4S binding domain CEJ46_03520 PF04381 Putative exonuclease, RdgC CEJ46_03525 PF00072 Response regulator receiver domain CEJ46_03525 PF00486 Transcriptional regulatory protein, C terminal CEJ46_03530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ46_03530 PF11808 Phosphate regulon sensor protein PhoR CEJ46_03530 PF00989 PAS fold CEJ46_03530 PF00512 His Kinase A (phospho-acceptor) domain CEJ46_03535 PF12849 PBP superfamily domain CEJ46_03540 PF02541 Ppx/GppA phosphatase family CEJ46_03545 PF17941 Polyphosphate kinase C-terminal domain 1 CEJ46_03545 PF02503 Polyphosphate kinase middle domain CEJ46_03545 PF13089 Polyphosphate kinase N-terminal domain CEJ46_03545 PF13090 Polyphosphate kinase C-terminal domain 2 CEJ46_03550 PF00528 Binding-protein-dependent transport system inner membrane component CEJ46_03555 PF00528 Binding-protein-dependent transport system inner membrane component CEJ46_03560 PF00005 ABC transporter CEJ46_03565 PF01895 PhoU domain CEJ46_03570 PF03932 CutC family CEJ46_03575 PF00578 AhpC/TSA family CEJ46_03575 PF10417 C-terminal domain of 1-Cys peroxiredoxin CEJ46_03580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ46_03580 PF03466 LysR substrate binding domain CEJ46_03585 PF01274 Malate synthase CEJ46_03590 PF00463 Isocitrate lyase family CEJ46_03595 PF00571 CBS domain CEJ46_03600 PF02547 Queuosine biosynthesis protein CEJ46_03605 PF01702 Queuine tRNA-ribosyltransferase CEJ46_03610 PF02699 Preprotein translocase subunit CEJ46_03615 PF13721 SecD export protein N-terminal TM region CEJ46_03615 PF02355 Protein export membrane protein CEJ46_03615 PF07549 SecD/SecF GG Motif CEJ46_03620 PF02355 Protein export membrane protein CEJ46_03620 PF07549 SecD/SecF GG Motif CEJ46_03625 PF00459 Inositol monophosphatase family CEJ46_03630 PF00588 SpoU rRNA Methylase family CEJ46_03635 PF02082 Transcriptional regulator CEJ46_03640 PF00266 Aminotransferase class-V CEJ46_03645 PF01592 NifU-like N terminal domain CEJ46_03650 PF01521 Iron-sulphur cluster biosynthesis CEJ46_03655 PF07743 HSCB C-terminal oligomerisation domain CEJ46_03655 PF00226 DnaJ domain CEJ46_03660 PF00012 Hsp70 protein CEJ46_03665 PF00111 2Fe-2S iron-sulfur cluster binding domain CEJ46_03670 PF04384 Iron-sulphur cluster assembly CEJ46_03675 PF00883 Cytosol aminopeptidase family, catalytic domain CEJ46_03675 PF12404 Peptidase CEJ46_03680 PF00334 Nucleoside diphosphate kinase CEJ46_03685 PF04055 Radical SAM superfamily CEJ46_03690 PF13464 Domain of unknown function (DUF4115) CEJ46_03695 PF04551 GcpE protein CEJ46_03700 PF13393 Histidyl-tRNA synthetase CEJ46_03700 PF03129 Anticodon binding domain CEJ46_03705 PF09976 Tetratricopeptide repeat-like domain CEJ46_03710 PF13360 PQQ-like domain CEJ46_03715 PF01926 50S ribosome-binding GTPase CEJ46_03715 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CEJ46_03725 PF13742 OB-fold nucleic acid binding domain CEJ46_03725 PF02601 Exonuclease VII, large subunit CEJ46_03730 PF00571 CBS domain CEJ46_03730 PF00478 IMP dehydrogenase / GMP reductase domain CEJ46_03735 PF02540 NAD synthase CEJ46_03735 PF00117 Glutamine amidotransferase class-I CEJ46_03735 PF00958 GMP synthase C terminal domain CEJ46_03765 PF08543 Phosphomethylpyrimidine kinase CEJ46_03770 PF06483 Chitinase C CEJ46_03770 PF00704 Glycosyl hydrolases family 18 CEJ46_03775 PF01184 GPR1/FUN34/yaaH family CEJ46_03780 PF01235 Sodium:alanine symporter family CEJ46_03785 PF01266 FAD dependent oxidoreductase CEJ46_03790 PF07885 Ion channel CEJ46_03805 PF00141 Peroxidase CEJ46_03810 PF05043 Mga helix-turn-helix domain CEJ46_03810 PF08279 HTH domain CEJ46_03810 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CEJ46_03810 PF00874 PRD domain CEJ46_03815 PF07071 KDGP aldolase CEJ46_03820 PF03841 L-seryl-tRNA selenium transferase CEJ46_03825 PF01979 Amidohydrolase family CEJ46_03870 PF13358 DDE superfamily endonuclease CEJ46_03880 PF00005 ABC transporter CEJ46_03960 PF08534 Redoxin CEJ46_04005 PF04002 RadC-like JAB domain CEJ46_04015 PF13737 Transposase DDE domain CEJ46_04020 PF01116 Fructose-bisphosphate aldolase class-II CEJ46_04025 PF01979 Amidohydrolase family CEJ46_04030 PF03610 PTS system fructose IIA component CEJ46_04035 PF03613 PTS system mannose/fructose/sorbose family IID component CEJ46_04040 PF03609 PTS system sorbose-specific iic component CEJ46_04045 PF03830 PTS system sorbose subfamily IIB component CEJ46_04050 PF01380 SIS domain CEJ46_04055 PF08013 Tagatose 6 phosphate kinase CEJ46_04060 PF08220 DeoR-like helix-turn-helix domain CEJ46_04060 PF00455 DeoR C terminal sensor domain CEJ46_04065 PF00455 DeoR C terminal sensor domain CEJ46_04065 PF08220 DeoR-like helix-turn-helix domain CEJ46_04080 PF04002 RadC-like JAB domain CEJ46_04110 PF02463 RecF/RecN/SMC N terminal domain CEJ46_04135 PF00589 Phage integrase family CEJ46_04135 PF13356 Arm DNA-binding domain CEJ46_04145 PF01668 SmpB protein CEJ46_04150 PF03364 Polyketide cyclase / dehydrase and lipid transport CEJ46_04155 PF03658 RnfH family Ubiquitin CEJ46_04160 PF04355 SmpA / OmlA family CEJ46_04165 PF02463 RecF/RecN/SMC N terminal domain CEJ46_04175 PF03222 Tryptophan/tyrosine permease family CEJ46_04180 PF01212 Beta-eliminating lyase CEJ46_04185 PF01513 ATP-NAD kinase CEJ46_04190 PF01025 GrpE CEJ46_04195 PF00012 Hsp70 protein CEJ46_04200 PF00226 DnaJ domain CEJ46_04200 PF01556 DnaJ C terminal domain CEJ46_04200 PF00684 DnaJ central domain CEJ46_04205 PF00114 Pilin (bacterial filament) CEJ46_04205 PF07963 Prokaryotic N-terminal methylation motif CEJ46_04230 PF03806 AbgT putative transporter family CEJ46_04235 PF00756 Putative esterase CEJ46_04240 PF08240 Alcohol dehydrogenase GroES-like domain CEJ46_04240 PF00107 Zinc-binding dehydrogenase CEJ46_04245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ46_04245 PF03466 LysR substrate binding domain CEJ46_04250 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CEJ46_04255 PF01464 Transglycosylase SLT domain CEJ46_04255 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEJ46_04265 PF02769 AIR synthase related protein, C-terminal domain CEJ46_04265 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CEJ46_04265 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CEJ46_04280 PF06786 Uncharacterised protein family (UPF0253) CEJ46_04285 PF04391 Protein of unknown function (DUF533) CEJ46_04290 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CEJ46_04290 PF03129 Anticodon binding domain CEJ46_04290 PF04073 Aminoacyl-tRNA editing domain CEJ46_04295 PF01980 tRNA-methyltransferase O CEJ46_04295 PF18389 TrmO C-terminal domain CEJ46_04300 PF01197 Ribosomal protein L31 CEJ46_04305 PF00444 Ribosomal protein L36 CEJ46_04310 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CEJ46_04335 PF04287 tRNA pseudouridine synthase C CEJ46_04340 PF00849 RNA pseudouridylate synthase CEJ46_04345 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CEJ46_04345 PF02779 Transketolase, pyrimidine binding domain CEJ46_04345 PF02780 Transketolase, C-terminal domain CEJ46_04350 PF00348 Polyprenyl synthetase CEJ46_04355 PF02609 Exonuclease VII small subunit CEJ46_04360 PF01618 MotA/TolQ/ExbB proton channel family CEJ46_04365 PF00691 OmpA family CEJ46_04365 PF13677 Membrane MotB of proton-channel complex MotA/MotB CEJ46_04370 PF02568 Thiamine biosynthesis protein (ThiI) CEJ46_04370 PF02926 THUMP domain CEJ46_04375 PF03466 LysR substrate binding domain CEJ46_04375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ46_04380 PF04241 Protein of unknown function (DUF423) CEJ46_04390 PF01367 5'-3' exonuclease, C-terminal SAM fold CEJ46_04390 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CEJ46_04395 PF03641 Possible lysine decarboxylase CEJ46_04395 PF11892 Domain of unknown function (DUF3412) CEJ46_04395 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases CEJ46_04400 PF00990 Diguanylate cyclase, GGDEF domain CEJ46_04410 PF14489 QueF-like protein CEJ46_04410 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CEJ46_04415 PF07348 Syd protein (SUKH-2) CEJ46_04420 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) CEJ46_04425 PF03180 NLPA lipoprotein CEJ46_04430 PF00528 Binding-protein-dependent transport system inner membrane component CEJ46_04435 PF00005 ABC transporter CEJ46_04435 PF09383 NIL domain CEJ46_04450 PF00356 Bacterial regulatory proteins, lacI family CEJ46_04455 PF00367 phosphotransferase system, EIIB CEJ46_04455 PF02378 Phosphotransferase system, EIIC CEJ46_04460 PF00128 Alpha amylase, catalytic domain CEJ46_04460 PF16657 Maltogenic Amylase, C-terminal domain CEJ46_04465 PF00072 Response regulator receiver domain CEJ46_04465 PF00486 Transcriptional regulatory protein, C terminal CEJ46_04470 PF00672 HAMP domain CEJ46_04470 PF00512 His Kinase A (phospho-acceptor) domain CEJ46_04470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ46_04505 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEJ46_04510 PF00873 AcrB/AcrD/AcrF family CEJ46_04520 PF01797 Transposase IS200 like CEJ46_04525 PF13358 DDE superfamily endonuclease CEJ46_04530 PF01451 Low molecular weight phosphotyrosine protein phosphatase CEJ46_04535 PF02350 UDP-N-acetylglucosamine 2-epimerase CEJ46_04540 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CEJ46_04540 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CEJ46_04540 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CEJ46_04545 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CEJ46_04545 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CEJ46_04545 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CEJ46_04580 PF00132 Bacterial transferase hexapeptide (six repeats) CEJ46_04580 PF06426 Serine acetyltransferase, N-terminal CEJ46_04590 PF03808 Glycosyl transferase WecB/TagA/CpsF family CEJ46_04595 PF17945 Beta/Gamma crystallin CEJ46_04595 PF12561 ToxR activated gene A lipoprotein domain CEJ46_04620 PF13614 AAA domain CEJ46_04625 PF18412 Outer-membrane lipoprotein Wza C-terminal domain CEJ46_04625 PF02563 Polysaccharide biosynthesis/export protein CEJ46_04625 PF10531 SLBB domain CEJ46_04635 PF02397 Bacterial sugar transferase CEJ46_04645 PF00464 Serine hydroxymethyltransferase CEJ46_04660 PF03099 Biotin/lipoate A/B protein ligase family CEJ46_04665 PF04359 Protein of unknown function (DUF493) CEJ46_04670 PF00768 D-alanyl-D-alanine carboxypeptidase CEJ46_04670 PF07943 Penicillin-binding protein 5, C-terminal domain CEJ46_04675 PF05036 Sporulation related domain CEJ46_04675 PF03330 Lytic transglycolase CEJ46_04680 PF01098 Cell cycle protein CEJ46_04685 PF00905 Penicillin binding protein transpeptidase domain CEJ46_04685 PF03717 Penicillin-binding Protein dimerisation domain CEJ46_04690 PF02590 Predicted SPOUT methyltransferase CEJ46_04700 PF06144 DNA polymerase III, delta subunit CEJ46_04700 PF14840 Processivity clamp loader gamma complex DNA pol III C-term CEJ46_04705 PF04390 Lipopolysaccharide-assembly CEJ46_04710 PF00133 tRNA synthetases class I (I, L, M and V) CEJ46_04710 PF13603 Leucyl-tRNA synthetase, Domain 2 CEJ46_04710 PF08264 Anticodon-binding domain of tRNA CEJ46_04715 PF07295 Zinc-ribbon containing domain CEJ46_04720 PF00795 Carbon-nitrogen hydrolase CEJ46_04725 PF00571 CBS domain CEJ46_04725 PF03471 Transporter associated domain CEJ46_04735 PF02562 PhoH-like protein CEJ46_04740 PF01938 TRAM domain CEJ46_04740 PF00919 Uncharacterized protein family UPF0004 CEJ46_04740 PF04055 Radical SAM superfamily CEJ46_04745 PF01494 FAD binding domain CEJ46_04750 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CEJ46_04755 PF05524 PEP-utilising enzyme, N-terminal CEJ46_04755 PF00391 PEP-utilising enzyme, mobile domain CEJ46_04755 PF02896 PEP-utilising enzyme, TIM barrel domain CEJ46_04760 PF00381 PTS HPr component phosphorylation site CEJ46_04765 PF00291 Pyridoxal-phosphate dependent enzyme CEJ46_04775 PF04354 ZipA, C-terminal FtsZ-binding domain CEJ46_04785 PF13609 Gram-negative porin CEJ46_04795 PF13411 MerR HTH family regulatory protein CEJ46_04805 PF16200 C-terminal region of band_7 CEJ46_04805 PF01145 SPFH domain / Band 7 family CEJ46_04815 PF00085 Thioredoxin CEJ46_04820 PF01370 NAD dependent epimerase/dehydratase family CEJ46_04820 PF08338 Domain of unknown function (DUF1731) CEJ46_04825 PF12850 Calcineurin-like phosphoesterase superfamily domain CEJ46_04835 PF17323 Trans-membrane regulatory protein ToxS CEJ46_04840 PF00486 Transcriptional regulatory protein, C terminal CEJ46_04845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ46_04845 PF00183 Hsp90 protein CEJ46_04850 PF05191 Adenylate kinase, active site lid CEJ46_04855 PF00762 Ferrochelatase CEJ46_04860 PF00854 POT family CEJ46_04865 PF02357 Transcription termination factor nusG CEJ46_04870 PF00733 Asparagine synthase CEJ46_04870 PF13537 Glutamine amidotransferase domain CEJ46_04875 PF02254 TrkA-N domain CEJ46_04875 PF00999 Sodium/hydrogen exchanger family CEJ46_04880 PF01047 MarR family CEJ46_04880 PF00480 ROK family CEJ46_04885 PF01979 Amidohydrolase family CEJ46_04890 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CEJ46_04890 PF02378 Phosphotransferase system, EIIC CEJ46_04890 PF00367 phosphotransferase system, EIIB CEJ46_04895 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CEJ46_04895 PF00749 tRNA synthetases class I (E and Q), catalytic domain CEJ46_04910 PF17848 Acetyl-coA carboxylase zinc finger domain CEJ46_04910 PF01039 Carboxyl transferase domain CEJ46_04915 PF02875 Mur ligase family, glutamate ligase domain CEJ46_04915 PF08245 Mur ligase middle domain CEJ46_04920 PF05036 Sporulation related domain CEJ46_04925 PF02674 Colicin V production protein CEJ46_04930 PF00156 Phosphoribosyl transferase domain CEJ46_04935 PF03553 Na+/H+ antiporter family CEJ46_04935 PF13726 Na+-H+ antiporter family CEJ46_04940 PF00929 Exonuclease CEJ46_04945 PF18393 MotY N-terminal domain CEJ46_04945 PF00691 OmpA family CEJ46_04950 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CEJ46_04965 PF01048 Phosphorylase superfamily CEJ46_04980 PF13358 DDE superfamily endonuclease CEJ46_04990 PF01609 Transposase DDE domain CEJ46_04990 PF13808 DDE_Tnp_1-associated CEJ46_05015 PF00633 Helix-hairpin-helix motif CEJ46_05015 PF00730 HhH-GPD superfamily base excision DNA repair protein CEJ46_05015 PF10576 Iron-sulfur binding domain of endonuclease III CEJ46_05030 PF03116 NQR2, RnfD, RnfE family CEJ46_05035 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CEJ46_05035 PF12838 4Fe-4S dicluster domain CEJ46_05035 PF13375 RnfC Barrel sandwich hybrid domain CEJ46_05035 PF10531 SLBB domain CEJ46_05040 PF04060 Putative Fe-S cluster CEJ46_05045 PF02508 Rnf-Nqr subunit, membrane protein CEJ46_05050 PF17837 4'-phosphopantetheinyl transferase N-terminal domain CEJ46_05050 PF01648 4'-phosphopantetheinyl transferase superfamily CEJ46_05055 PF07715 TonB-dependent Receptor Plug Domain CEJ46_05060 PF11806 Domain of unknown function (DUF3327) CEJ46_05060 PF00756 Putative esterase CEJ46_05070 PF13193 AMP-binding enzyme C-terminal domain CEJ46_05070 PF00550 Phosphopantetheine attachment site CEJ46_05070 PF00501 AMP-binding enzyme CEJ46_05070 PF00668 Condensation domain CEJ46_05075 PF05977 Transmembrane secretion effector CEJ46_05080 PF00857 Isochorismatase family CEJ46_05080 PF00550 Phosphopantetheine attachment site CEJ46_05085 PF00501 AMP-binding enzyme CEJ46_05085 PF13193 AMP-binding enzyme C-terminal domain CEJ46_05090 PF00425 chorismate binding enzyme CEJ46_05100 PF00793 DAHP synthetase I family CEJ46_05110 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CEJ46_05120 PF07690 Major Facilitator Superfamily CEJ46_05130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ46_05130 PF03466 LysR substrate binding domain CEJ46_05140 PF17757 UvrB interaction domain CEJ46_05140 PF12344 Ultra-violet resistance protein B CEJ46_05140 PF04851 Type III restriction enzyme, res subunit CEJ46_05140 PF00271 Helicase conserved C-terminal domain CEJ46_05140 PF02151 UvrB/uvrC motif CEJ46_05145 PF02954 Bacterial regulatory protein, Fis family CEJ46_05145 PF00158 Sigma-54 interaction domain CEJ46_05145 PF00072 Response regulator receiver domain CEJ46_05150 PF01627 Hpt domain CEJ46_05155 PF01933 Uncharacterised protein family UPF0052 CEJ46_05160 PF06463 Molybdenum Cofactor Synthesis C CEJ46_05160 PF04055 Radical SAM superfamily CEJ46_05165 PF00994 Probable molybdopterin binding domain CEJ46_05170 PF01967 MoaC family CEJ46_05175 PF02597 ThiS family CEJ46_05180 PF02391 MoaE protein CEJ46_05185 PF07694 5TMR of 5TMR-LYT CEJ46_05185 PF00990 Diguanylate cyclase, GGDEF domain CEJ46_05190 PF00392 Bacterial regulatory proteins, gntR family CEJ46_05190 PF07085 DRTGG domain CEJ46_05190 PF00571 CBS domain CEJ46_05190 PF03061 Thioesterase superfamily CEJ46_05195 PF00403 Heavy-metal-associated domain CEJ46_05200 PF01048 Phosphorylase superfamily CEJ46_05210 PF09334 tRNA synthetases class I (M) CEJ46_05210 PF01588 Putative tRNA binding domain CEJ46_05215 PF10609 NUBPL iron-transfer P-loop NTPase CEJ46_05220 PF00485 Phosphoribulokinase / Uridine kinase family CEJ46_05225 PF05170 AsmA family CEJ46_05230 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CEJ46_05230 PF12557 Cob(I)alamin adenosyltransferase N terminal CEJ46_05235 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CEJ46_05240 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CEJ46_05250 PF08281 Sigma-70, region 4 CEJ46_05250 PF04542 Sigma-70 region 2 CEJ46_05260 PF00108 Thiolase, N-terminal domain CEJ46_05260 PF02803 Thiolase, C-terminal domain CEJ46_05265 PF00378 Enoyl-CoA hydratase/isomerase CEJ46_05265 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CEJ46_05265 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CEJ46_05270 PF00881 Nitroreductase family CEJ46_05275 PF03466 LysR substrate binding domain CEJ46_05275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ46_05280 PF00072 Response regulator receiver domain CEJ46_05290 PF04304 Protein of unknown function (DUF454) CEJ46_05295 PF00156 Phosphoribosyl transferase domain CEJ46_05300 PF12169 DNA polymerase III subunits gamma and tau domain III CEJ46_05300 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CEJ46_05300 PF12170 DNA polymerase III tau subunit V interacting with alpha CEJ46_05305 PF02575 YbaB/EbfC DNA-binding family CEJ46_05315 PF03692 Putative zinc- or iron-chelating domain CEJ46_05335 PF13847 Methyltransferase domain CEJ46_05340 PF01263 Aldose 1-epimerase CEJ46_05345 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CEJ46_05345 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CEJ46_05350 PF01641 SelR domain CEJ46_05360 PF07023 Protein of unknown function (DUF1315) CEJ46_05365 PF17763 Glutaminase/Asparaginase C-terminal domain CEJ46_05365 PF00710 Asparaginase, N-terminal CEJ46_05370 PF01343 Peptidase family S49 CEJ46_05375 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEJ46_05375 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CEJ46_05380 PF00551 Formyl transferase CEJ46_05380 PF01842 ACT domain CEJ46_05390 PF04851 Type III restriction enzyme, res subunit CEJ46_05390 PF13307 Helicase C-terminal domain CEJ46_05395 PF00814 Glycoprotease family CEJ46_05410 PF00561 alpha/beta hydrolase fold CEJ46_05415 PF13193 AMP-binding enzyme C-terminal domain CEJ46_05415 PF00501 AMP-binding enzyme CEJ46_05420 PF01612 3'-5' exonuclease CEJ46_05420 PF00570 HRDC domain CEJ46_05425 PF03776 Septum formation topological specificity factor MinE CEJ46_05430 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CEJ46_05435 PF03775 Septum formation inhibitor MinC, C-terminal domain CEJ46_05435 PF05209 Septum formation inhibitor MinC, N-terminal domain CEJ46_05440 PF05166 YcgL domain CEJ46_05445 PF13406 Transglycosylase SLT domain CEJ46_05450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ46_05450 PF03466 LysR substrate binding domain CEJ46_05455 PF01773 Na+ dependent nucleoside transporter N-terminus CEJ46_05455 PF07662 Na+ dependent nucleoside transporter C-terminus CEJ46_05455 PF07670 Nucleoside recognition CEJ46_05460 PF00704 Glycosyl hydrolases family 18 CEJ46_05460 PF06483 Chitinase C CEJ46_05465 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CEJ46_05465 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CEJ46_05475 PF01551 Peptidase family M23 CEJ46_05480 PF09905 DNA-binding protein VF530 CEJ46_05490 PF00809 Pterin binding enzyme CEJ46_05490 PF02310 B12 binding domain CEJ46_05490 PF02607 B12 binding domain CEJ46_05490 PF02965 Vitamin B12 dependent methionine synthase, activation domain CEJ46_05490 PF02574 Homocysteine S-methyltransferase CEJ46_05495 PF02028 BCCT, betaine/carnitine/choline family transporter CEJ46_05500 PF02903 Alpha amylase, N-terminal ig-like domain CEJ46_05500 PF00128 Alpha amylase, catalytic domain CEJ46_05500 PF16657 Maltogenic Amylase, C-terminal domain CEJ46_05505 PF00270 DEAD/DEAH box helicase CEJ46_05505 PF00271 Helicase conserved C-terminal domain CEJ46_05515 PF03315 Serine dehydratase beta chain CEJ46_05515 PF03313 Serine dehydratase alpha chain CEJ46_05525 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CEJ46_05525 PF01610 Transposase CEJ46_05525 PF13542 Helix-turn-helix domain of transposase family ISL3 CEJ46_05530 PF00486 Transcriptional regulatory protein, C terminal CEJ46_05530 PF00072 Response regulator receiver domain CEJ46_05535 PF00672 HAMP domain CEJ46_05535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ46_05535 PF00512 His Kinase A (phospho-acceptor) domain CEJ46_05540 PF01547 Bacterial extracellular solute-binding protein CEJ46_05550 PF03480 Bacterial extracellular solute-binding protein, family 7 CEJ46_05555 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CEJ46_05560 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEJ46_05565 PF00158 Sigma-54 interaction domain CEJ46_05565 PF00072 Response regulator receiver domain CEJ46_05565 PF02954 Bacterial regulatory protein, Fis family CEJ46_05570 PF02743 Cache domain CEJ46_05570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ46_05570 PF00512 His Kinase A (phospho-acceptor) domain CEJ46_05580 PF05697 Bacterial trigger factor protein (TF) CEJ46_05580 PF05698 Bacterial trigger factor protein (TF) C-terminus CEJ46_05580 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CEJ46_05585 PF00574 Clp protease CEJ46_05590 PF10431 C-terminal, D2-small domain, of ClpB protein CEJ46_05590 PF07724 AAA domain (Cdc48 subfamily) CEJ46_05590 PF06689 ClpX C4-type zinc finger CEJ46_05595 PF02190 ATP-dependent protease La (LON) substrate-binding domain CEJ46_05595 PF05362 Lon protease (S16) C-terminal proteolytic domain CEJ46_05595 PF00004 ATPase family associated with various cellular activities (AAA) CEJ46_05600 PF00216 Bacterial DNA-binding protein CEJ46_05605 PF13145 PPIC-type PPIASE domain CEJ46_05615 PF02224 Cytidylate kinase CEJ46_05620 PF00575 S1 RNA binding domain CEJ46_05630 PF06305 Lipopolysaccharide assembly protein A domain CEJ46_05635 PF18073 Rubredoxin metal binding domain CEJ46_05640 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CEJ46_05650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ46_05650 PF03466 LysR substrate binding domain CEJ46_05660 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CEJ46_05660 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CEJ46_05665 PF01037 Lrp/AsnC ligand binding domain CEJ46_05670 PF17854 FtsK alpha domain CEJ46_05670 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CEJ46_05670 PF01580 FtsK/SpoIIIE family CEJ46_05670 PF09397 Ftsk gamma domain CEJ46_05680 PF01435 Peptidase family M48 CEJ46_05690 PF00106 short chain dehydrogenase CEJ46_05715 PF16036 Chalcone isomerase-like CEJ46_05725 PF11842 Domain of unknown function (DUF3362) CEJ46_05725 PF08497 Radical SAM N-terminal CEJ46_05725 PF04055 Radical SAM superfamily CEJ46_05730 PF00089 Trypsin CEJ46_05735 PF00990 Diguanylate cyclase, GGDEF domain CEJ46_05735 PF00563 EAL domain CEJ46_05735 PF03707 Bacterial signalling protein N terminal repeat CEJ46_05750 PF03466 LysR substrate binding domain CEJ46_05750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ46_05755 PF01717 Cobalamin-independent synthase, Catalytic domain CEJ46_05755 PF08267 Cobalamin-independent synthase, N-terminal domain CEJ46_05765 PF03795 YCII-related domain CEJ46_05770 PF03061 Thioesterase superfamily CEJ46_05775 PF04279 Intracellular septation protein A CEJ46_05785 PF00375 Sodium:dicarboxylate symporter family CEJ46_05800 PF00291 Pyridoxal-phosphate dependent enzyme CEJ46_05805 PF00218 Indole-3-glycerol phosphate synthase CEJ46_05805 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CEJ46_05810 PF00591 Glycosyl transferase family, a/b domain CEJ46_05810 PF02885 Glycosyl transferase family, helical bundle domain CEJ46_05815 PF00117 Glutamine amidotransferase class-I CEJ46_05820 PF04715 Anthranilate synthase component I, N terminal region CEJ46_05820 PF00425 chorismate binding enzyme CEJ46_05825 PF08056 Tryptophan operon leader peptide CEJ46_05830 PF02811 PHP domain CEJ46_05835 PF01300 Telomere recombination CEJ46_05840 PF01479 S4 domain CEJ46_05840 PF00849 RNA pseudouridylate synthase CEJ46_05845 PF00563 EAL domain CEJ46_05845 PF00990 Diguanylate cyclase, GGDEF domain CEJ46_05845 PF03707 Bacterial signalling protein N terminal repeat CEJ46_05850 PF00005 ABC transporter CEJ46_05850 PF00664 ABC transporter transmembrane region CEJ46_05855 PF00664 ABC transporter transmembrane region CEJ46_05855 PF00005 ABC transporter CEJ46_05860 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEJ46_05865 PF00072 Response regulator receiver domain CEJ46_05865 PF00990 Diguanylate cyclase, GGDEF domain CEJ46_05875 PF00266 Aminotransferase class-V CEJ46_05880 PF02698 DUF218 domain CEJ46_05890 PF00390 Malic enzyme, N-terminal domain CEJ46_05890 PF03949 Malic enzyme, NAD binding domain CEJ46_05900 PF01259 SAICAR synthetase CEJ46_05905 PF06826 Predicted Permease Membrane Region CEJ46_05905 PF02080 TrkA-C domain CEJ46_05910 PF00462 Glutaredoxin CEJ46_05915 PF00465 Iron-containing alcohol dehydrogenase CEJ46_05920 PF01418 Helix-turn-helix domain, rpiR family CEJ46_05920 PF01380 SIS domain CEJ46_05925 PF00282 Pyridoxal-dependent decarboxylase conserved domain CEJ46_05935 PF03956 Lysine exporter LysO CEJ46_05945 PF04993 TfoX N-terminal domain CEJ46_05945 PF04994 TfoX C-terminal domain CEJ46_05960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ46_05960 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEJ46_05960 PF00512 His Kinase A (phospho-acceptor) domain CEJ46_05970 PF00266 Aminotransferase class-V CEJ46_05975 PF00206 Lyase CEJ46_05975 PF08328 Adenylosuccinate lyase C-terminal CEJ46_05980 PF04356 Protein of unknown function (DUF489) CEJ46_05995 PF00294 pfkB family carbohydrate kinase CEJ46_06000 PF00816 H-NS histone family CEJ46_06005 PF03553 Na+/H+ antiporter family CEJ46_06010 PF08029 HisG, C-terminal domain CEJ46_06010 PF01634 ATP phosphoribosyltransferase CEJ46_06015 PF00815 Histidinol dehydrogenase CEJ46_06020 PF00155 Aminotransferase class I and II CEJ46_06025 PF00475 Imidazoleglycerol-phosphate dehydratase CEJ46_06025 PF08645 Polynucleotide kinase 3 phosphatase CEJ46_06030 PF00117 Glutamine amidotransferase class-I CEJ46_06035 PF00977 Histidine biosynthesis protein CEJ46_06040 PF00977 Histidine biosynthesis protein CEJ46_06045 PF01502 Phosphoribosyl-AMP cyclohydrolase CEJ46_06045 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CEJ46_06050 PF00849 RNA pseudouridylate synthase CEJ46_06055 PF03971 Monomeric isocitrate dehydrogenase CEJ46_06060 PF00313 'Cold-shock' DNA-binding domain CEJ46_06065 PF02617 ATP-dependent Clp protease adaptor protein ClpS CEJ46_06070 PF17871 AAA lid domain CEJ46_06070 PF10431 C-terminal, D2-small domain, of ClpB protein CEJ46_06070 PF07724 AAA domain (Cdc48 subfamily) CEJ46_06070 PF02861 Clp amino terminal domain, pathogenicity island component CEJ46_06070 PF00004 ATPase family associated with various cellular activities (AAA) CEJ46_06075 PF01176 Translation initiation factor 1A / IF-1 CEJ46_06080 PF04377 Arginine-tRNA-protein transferase, C terminus CEJ46_06080 PF04376 Arginine-tRNA-protein transferase, N terminus CEJ46_06085 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CEJ46_06090 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CEJ46_06095 PF10692 Protein of unknown function (DUF2498) CEJ46_06100 PF01396 Topoisomerase DNA binding C4 zinc finger CEJ46_06100 PF01751 Toprim domain CEJ46_06100 PF08272 Topoisomerase I zinc-ribbon-like CEJ46_06100 PF01131 DNA topoisomerase CEJ46_06105 PF00483 Nucleotidyl transferase CEJ46_06110 PF08323 Starch synthase catalytic domain CEJ46_06110 PF00534 Glycosyl transferases group 1 CEJ46_06130 PF04993 TfoX N-terminal domain CEJ46_06130 PF04994 TfoX C-terminal domain CEJ46_06135 PF00356 Bacterial regulatory proteins, lacI family CEJ46_06140 PF02613 Nitrate reductase delta subunit CEJ46_06145 PF00072 Response regulator receiver domain CEJ46_06145 PF00486 Transcriptional regulatory protein, C terminal CEJ46_06150 PF02698 DUF218 domain CEJ46_06160 PF17192 MukF middle domain CEJ46_06160 PF17193 MukF C-terminal domain CEJ46_06160 PF03882 MukF winged-helix domain CEJ46_06165 PF04288 MukE-like family CEJ46_06170 PF04310 MukB N-terminal CEJ46_06170 PF16330 MukB hinge domain CEJ46_06185 PF18030 RimK PreATP-grasp domain CEJ46_06185 PF08443 RimK-like ATP-grasp domain CEJ46_06190 PF08003 Protein of unknown function (DUF1698) CEJ46_06195 PF13649 Methyltransferase domain CEJ46_06200 PF01904 Protein of unknown function DUF72 CEJ46_06205 PF00152 tRNA synthetases class II (D, K and N) CEJ46_06205 PF01336 OB-fold nucleic acid binding domain CEJ46_06205 PF02938 GAD domain CEJ46_06210 PF00265 Thymidine kinase CEJ46_06215 PF01609 Transposase DDE domain CEJ46_06215 PF14706 Transposase DNA-binding CEJ46_06215 PF02281 Transposase Tn5 dimerisation domain CEJ46_06220 PF02698 DUF218 domain CEJ46_06230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ46_06230 PF03466 LysR substrate binding domain CEJ46_06245 PF01226 Formate/nitrite transporter CEJ46_06250 PF06796 Periplasmic nitrate reductase protein NapE CEJ46_06255 PF03264 NapC/NirT cytochrome c family, N-terminal region CEJ46_06260 PF18364 Molybdopterin oxidoreductase N-terminal domain CEJ46_06260 PF01568 Molydopterin dinucleotide binding domain CEJ46_06260 PF00384 Molybdopterin oxidoreductase CEJ46_06270 PF01368 DHH family CEJ46_06270 PF02833 DHHA2 domain CEJ46_06290 PF00005 ABC transporter CEJ46_06295 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEJ46_06295 PF00005 ABC transporter CEJ46_06300 PF12911 N-terminal TM domain of oligopeptide transport permease C CEJ46_06300 PF00528 Binding-protein-dependent transport system inner membrane component CEJ46_06305 PF00528 Binding-protein-dependent transport system inner membrane component CEJ46_06310 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEJ46_06315 PF02954 Bacterial regulatory protein, Fis family CEJ46_06315 PF00158 Sigma-54 interaction domain CEJ46_06320 PF04012 PspA/IM30 family CEJ46_06325 PF06667 Phage shock protein B CEJ46_06335 PF00117 Glutamine amidotransferase class-I CEJ46_06335 PF13673 Acetyltransferase (GNAT) domain CEJ46_06335 PF00958 GMP synthase C terminal domain CEJ46_06335 PF13302 Acetyltransferase (GNAT) domain CEJ46_06335 PF03352 Methyladenine glycosylase CEJ46_06340 PF01053 Cys/Met metabolism PLP-dependent enzyme CEJ46_06345 PF13091 PLD-like domain CEJ46_06345 PF13396 Phospholipase_D-nuclease N-terminal CEJ46_06350 PF00209 Sodium:neurotransmitter symporter family CEJ46_06355 PF00849 RNA pseudouridylate synthase CEJ46_06365 PF12792 CSS motif domain associated with EAL CEJ46_06365 PF00563 EAL domain CEJ46_06370 PF01066 CDP-alcohol phosphatidyltransferase CEJ46_06375 PF00005 ABC transporter CEJ46_06380 PF00528 Binding-protein-dependent transport system inner membrane component CEJ46_06385 PF13416 Bacterial extracellular solute-binding protein CEJ46_06395 PF06945 Protein of unknown function (DUF1289) CEJ46_06405 PF00149 Calcineurin-like phosphoesterase CEJ46_06405 PF02872 5'-nucleotidase, C-terminal domain CEJ46_06415 PF00271 Helicase conserved C-terminal domain CEJ46_06415 PF00270 DEAD/DEAH box helicase CEJ46_06435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ46_06435 PF00512 His Kinase A (phospho-acceptor) domain CEJ46_06435 PF00672 HAMP domain CEJ46_06440 PF00486 Transcriptional regulatory protein, C terminal CEJ46_06440 PF00072 Response regulator receiver domain CEJ46_06450 PF00271 Helicase conserved C-terminal domain CEJ46_06450 PF04851 Type III restriction enzyme, res subunit CEJ46_06455 PF00849 RNA pseudouridylate synthase CEJ46_06455 PF01479 S4 domain CEJ46_06460 PF07690 Major Facilitator Superfamily CEJ46_06470 PF11066 Protein of unknown function (DUF2867) CEJ46_06470 PF13460 NAD(P)H-binding CEJ46_06475 PF01554 MatE CEJ46_06480 PF00005 ABC transporter CEJ46_06495 PF06965 Na+/H+ antiporter 1 CEJ46_06500 PF01609 Transposase DDE domain CEJ46_06500 PF13808 DDE_Tnp_1-associated CEJ46_06510 PF00202 Aminotransferase class-III CEJ46_06515 PF03435 Saccharopine dehydrogenase NADP binding domain CEJ46_06515 PF16653 Saccharopine dehydrogenase C-terminal domain CEJ46_06525 PF00672 HAMP domain CEJ46_06525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ46_06540 PF00994 Probable molybdopterin binding domain CEJ46_06550 PF00111 2Fe-2S iron-sulfur cluster binding domain CEJ46_06550 PF00175 Oxidoreductase NAD-binding domain CEJ46_06550 PF00970 Oxidoreductase FAD-binding domain CEJ46_06555 PF00268 Ribonucleotide reductase, small chain CEJ46_06560 PF02867 Ribonucleotide reductase, barrel domain CEJ46_06560 PF00317 Ribonucleotide reductase, all-alpha domain CEJ46_06560 PF03477 ATP cone domain CEJ46_06570 PF00521 DNA gyrase/topoisomerase IV, subunit A CEJ46_06570 PF03989 DNA gyrase C-terminal domain, beta-propeller CEJ46_06575 PF00672 HAMP domain CEJ46_06575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ46_06575 PF12729 Four helix bundle sensory module for signal transduction CEJ46_06585 PF01238 Phosphomannose isomerase type I CEJ46_06590 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CEJ46_06590 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CEJ46_06590 PF02378 Phosphotransferase system, EIIC CEJ46_06595 PF12833 Helix-turn-helix domain CEJ46_06605 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CEJ46_06615 PF02001 Protein of unknown function DUF134 CEJ46_06630 PF13407 Periplasmic binding protein domain CEJ46_06635 PF00005 ABC transporter CEJ46_06640 PF02653 Branched-chain amino acid transport system / permease component CEJ46_06650 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CEJ46_06655 PF01219 Prokaryotic diacylglycerol kinase CEJ46_06660 PF00512 His Kinase A (phospho-acceptor) domain CEJ46_06660 PF00672 HAMP domain CEJ46_06660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ46_06665 PF00486 Transcriptional regulatory protein, C terminal CEJ46_06665 PF00072 Response regulator receiver domain CEJ46_06670 PF01970 Tripartite tricarboxylate transporter TctA family CEJ46_06700 PF00285 Citrate synthase, C-terminal domain CEJ46_06705 PF00694 Aconitase C-terminal domain CEJ46_06705 PF00330 Aconitase family (aconitate hydratase) CEJ46_06710 PF04303 PrpF protein CEJ46_06715 PF00501 AMP-binding enzyme CEJ46_06715 PF13193 AMP-binding enzyme C-terminal domain CEJ46_06715 PF16177 Acetyl-coenzyme A synthetase N-terminus CEJ46_06735 PF04055 Radical SAM superfamily CEJ46_06740 PF06508 Queuosine biosynthesis protein QueC CEJ46_06765 PF10672 S-adenosylmethionine-dependent methyltransferase CEJ46_06765 PF17785 PUA-like domain CEJ46_06770 PF00708 Acylphosphatase CEJ46_06775 PF04358 DsrC like protein CEJ46_06780 PF01027 Inhibitor of apoptosis-promoting Bax1 CEJ46_06785 PF00005 ABC transporter CEJ46_06790 PF00528 Binding-protein-dependent transport system inner membrane component CEJ46_06795 PF00528 Binding-protein-dependent transport system inner membrane component CEJ46_06800 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEJ46_06805 PF14824 Sirohaem biosynthesis protein central CEJ46_06805 PF10414 Sirohaem synthase dimerisation region CEJ46_06805 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CEJ46_06810 PF00990 Diguanylate cyclase, GGDEF domain CEJ46_06815 PF04461 Protein of unknown function (DUF520) CEJ46_06820 PF00793 DAHP synthetase I family CEJ46_06825 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CEJ46_06825 PF02896 PEP-utilising enzyme, TIM barrel domain CEJ46_06825 PF00391 PEP-utilising enzyme, mobile domain CEJ46_06840 PF17783 CvfB-like winged helix domain CEJ46_06840 PF13509 S1 domain CEJ46_06845 PF01189 16S rRNA methyltransferase RsmB/F CEJ46_06845 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CEJ46_06845 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF CEJ46_06850 PF01797 Transposase IS200 like CEJ46_06860 PF02470 MlaD protein CEJ46_06865 PF04403 Paraquat-inducible protein A CEJ46_06870 PF00005 ABC transporter CEJ46_06870 PF00664 ABC transporter transmembrane region CEJ46_06875 PF13185 GAF domain CEJ46_06885 PF00595 PDZ domain CEJ46_06885 PF17804 Tail specific protease N-terminal domain CEJ46_06885 PF03572 Peptidase family S41 CEJ46_06885 PF11818 C-terminal domain of tail specific protease (DUF3340) CEJ46_06895 PF01433 Peptidase family M1 domain CEJ46_06895 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CEJ46_06895 PF11940 Domain of unknown function (DUF3458) Ig-like fold CEJ46_06905 PF05088 Bacterial NAD-glutamate dehydrogenase CEJ46_06910 PF01180 Dihydroorotate dehydrogenase CEJ46_06915 PF07126 Cell-division protein ZapC CEJ46_06920 PF01170 Putative RNA methylase family UPF0020 CEJ46_06920 PF10672 S-adenosylmethionine-dependent methyltransferase CEJ46_06920 PF02926 THUMP domain CEJ46_06940 PF04957 Ribosome modulation factor CEJ46_06945 PF07977 FabA-like domain CEJ46_06950 PF13654 AAA domain CEJ46_06950 PF05362 Lon protease (S16) C-terminal proteolytic domain CEJ46_06955 PF17414 MatP C-terminal ribbon-helix-helix domain CEJ46_06955 PF06303 MatP N-terminal domain CEJ46_06975 PF00115 Cytochrome C and Quinol oxidase polypeptide I CEJ46_06990 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CEJ46_06990 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CEJ46_07000 PF00403 Heavy-metal-associated domain CEJ46_07015 PF13545 Crp-like helix-turn-helix domain CEJ46_07015 PF00027 Cyclic nucleotide-binding domain CEJ46_07020 PF00582 Universal stress protein family CEJ46_07025 PF01171 PP-loop family CEJ46_07045 PF08402 TOBE domain CEJ46_07045 PF00005 ABC transporter CEJ46_07050 PF00528 Binding-protein-dependent transport system inner membrane component CEJ46_07055 PF00528 Binding-protein-dependent transport system inner membrane component CEJ46_07060 PF13416 Bacterial extracellular solute-binding protein CEJ46_07065 PF13416 Bacterial extracellular solute-binding protein CEJ46_07070 PF02146 Sir2 family CEJ46_07075 PF00909 Ammonium Transporter Family CEJ46_07080 PF00005 ABC transporter CEJ46_07080 PF12848 ABC transporter CEJ46_07085 PF00196 Bacterial regulatory proteins, luxR family CEJ46_07085 PF00072 Response regulator receiver domain CEJ46_07090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ46_07090 PF07730 Histidine kinase CEJ46_07090 PF05231 MASE1 CEJ46_07095 PF07690 Major Facilitator Superfamily CEJ46_07105 PF00528 Binding-protein-dependent transport system inner membrane component CEJ46_07110 PF00005 ABC transporter CEJ46_07110 PF08402 TOBE domain CEJ46_07115 PF12804 MobA-like NTP transferase domain CEJ46_07120 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CEJ46_07130 PF00480 ROK family CEJ46_07145 PF00672 HAMP domain CEJ46_07145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ46_07145 PF12729 Four helix bundle sensory module for signal transduction CEJ46_07150 PF00877 NlpC/P60 family CEJ46_07170 PF01554 MatE CEJ46_07175 PF14743 DNA ligase OB-like domain CEJ46_07175 PF01068 ATP dependent DNA ligase domain CEJ46_07180 PF01734 Patatin-like phospholipase CEJ46_07195 PF02472 Biopolymer transport protein ExbD/TolR CEJ46_07200 PF01618 MotA/TolQ/ExbB proton channel family CEJ46_07205 PF01618 MotA/TolQ/ExbB proton channel family CEJ46_07230 PF04151 Bacterial pre-peptidase C-terminal domain CEJ46_07230 PF04389 Peptidase family M28 CEJ46_07235 PF02798 Glutathione S-transferase, N-terminal domain CEJ46_07235 PF14497 Glutathione S-transferase, C-terminal domain CEJ46_07245 PF04209 homogentisate 1,2-dioxygenase CEJ46_07250 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CEJ46_07255 PF01546 Peptidase family M20/M25/M40 CEJ46_07255 PF07687 Peptidase dimerisation domain CEJ46_07270 PF01235 Sodium:alanine symporter family CEJ46_07275 PF01810 LysE type translocator CEJ46_07280 PF02074 Carboxypeptidase Taq (M32) metallopeptidase CEJ46_07285 PF07690 Major Facilitator Superfamily CEJ46_07290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ46_07290 PF03466 LysR substrate binding domain CEJ46_07300 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CEJ46_07300 PF00271 Helicase conserved C-terminal domain CEJ46_07300 PF00270 DEAD/DEAH box helicase CEJ46_07300 PF04408 Helicase associated domain (HA2) CEJ46_07300 PF11898 Domain of unknown function (DUF3418) CEJ46_07320 PF00990 Diguanylate cyclase, GGDEF domain CEJ46_07320 PF17158 Membrane-associated sensor, integral membrane domain CEJ46_07330 PF00012 Hsp70 protein CEJ46_07335 PF00012 Hsp70 protein CEJ46_07340 PF00465 Iron-containing alcohol dehydrogenase CEJ46_07355 PF02837 Glycosyl hydrolases family 2, sugar binding domain CEJ46_07355 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CEJ46_07355 PF00703 Glycosyl hydrolases family 2 CEJ46_07355 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 CEJ46_07365 PF00356 Bacterial regulatory proteins, lacI family CEJ46_07370 PF00232 Glycosyl hydrolase family 1 CEJ46_07375 PF00271 Helicase conserved C-terminal domain CEJ46_07375 PF00270 DEAD/DEAH box helicase CEJ46_07380 PF00384 Molybdopterin oxidoreductase CEJ46_07380 PF01568 Molydopterin dinucleotide binding domain CEJ46_07380 PF18364 Molybdopterin oxidoreductase N-terminal domain CEJ46_07385 PF03264 NapC/NirT cytochrome c family, N-terminal region CEJ46_07390 PF00313 'Cold-shock' DNA-binding domain CEJ46_07400 PF02954 Bacterial regulatory protein, Fis family CEJ46_07400 PF00072 Response regulator receiver domain CEJ46_07400 PF00158 Sigma-54 interaction domain CEJ46_07405 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEJ46_07405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ46_07405 PF00512 His Kinase A (phospho-acceptor) domain CEJ46_07410 PF00939 Sodium:sulfate symporter transmembrane region CEJ46_07415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ46_07415 PF00672 HAMP domain CEJ46_07420 PF01168 Alanine racemase, N-terminal domain CEJ46_07420 PF00842 Alanine racemase, C-terminal domain CEJ46_07430 PF00990 Diguanylate cyclase, GGDEF domain CEJ46_07440 PF13302 Acetyltransferase (GNAT) domain CEJ46_07445 PF00158 Sigma-54 interaction domain CEJ46_07445 PF18024 Helix-turn-helix domain CEJ46_07450 PF05128 Domain of unknown function (DUF697) CEJ46_07455 PF04317 YcjX-like family, DUF463 CEJ46_07470 PF00425 chorismate binding enzyme CEJ46_07470 PF04715 Anthranilate synthase component I, N terminal region CEJ46_07475 PF00293 NUDIX domain CEJ46_07480 PF03222 Tryptophan/tyrosine permease family CEJ46_07485 PF03313 Serine dehydratase alpha chain CEJ46_07485 PF03315 Serine dehydratase beta chain CEJ46_07490 PF00041 Fibronectin type III domain CEJ46_07490 PF12561 ToxR activated gene A lipoprotein domain CEJ46_07495 PF04231 Endonuclease I CEJ46_07500 PF01242 6-pyruvoyl tetrahydropterin synthase CEJ46_07505 PF17200 Single Cache domain 2 CEJ46_07505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ46_07505 PF00672 HAMP domain CEJ46_07510 PF00152 tRNA synthetases class II (D, K and N) CEJ46_07510 PF01336 OB-fold nucleic acid binding domain CEJ46_07520 PF01339 CheB methylesterase CEJ46_07520 PF00072 Response regulator receiver domain CEJ46_07525 PF03975 CheD chemotactic sensory transduction CEJ46_07530 PF01739 CheR methyltransferase, SAM binding domain CEJ46_07530 PF03705 CheR methyltransferase, all-alpha domain CEJ46_07535 PF01584 CheW-like domain CEJ46_07540 PF00672 HAMP domain CEJ46_07540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ46_07540 PF12729 Four helix bundle sensory module for signal transduction CEJ46_07545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ46_07545 PF09078 CheY binding CEJ46_07545 PF02895 Signal transducing histidine kinase, homodimeric domain CEJ46_07545 PF01627 Hpt domain CEJ46_07545 PF01584 CheW-like domain CEJ46_07555 PF00072 Response regulator receiver domain CEJ46_07560 PF12729 Four helix bundle sensory module for signal transduction CEJ46_07560 PF00672 HAMP domain CEJ46_07560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ46_07565 PF00672 HAMP domain CEJ46_07565 PF01966 HD domain CEJ46_07570 PF00155 Aminotransferase class I and II CEJ46_07575 PF00571 CBS domain CEJ46_07580 PF02811 PHP domain CEJ46_07580 PF00929 Exonuclease CEJ46_07580 PF07733 Bacterial DNA polymerase III alpha NTPase domain CEJ46_07580 PF11490 DNA polymerase III polC-type N-terminus II CEJ46_07580 PF14480 DNA polymerase III polC-type N-terminus I CEJ46_07580 PF14579 Helix-hairpin-helix motif CEJ46_07580 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CEJ46_07585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ46_07585 PF00672 HAMP domain CEJ46_07590 PF02028 BCCT, betaine/carnitine/choline family transporter CEJ46_07595 PF01047 MarR family CEJ46_07610 PF00753 Metallo-beta-lactamase superfamily CEJ46_07615 PF05951 Bacterial protein of unknown function (DUF882) CEJ46_07620 PF03734 L,D-transpeptidase catalytic domain CEJ46_07620 PF01471 Putative peptidoglycan binding domain CEJ46_07645 PF00925 GTP cyclohydrolase II CEJ46_07650 PF00480 ROK family CEJ46_07655 PF07715 TonB-dependent Receptor Plug Domain CEJ46_07655 PF00593 TonB dependent receptor CEJ46_07660 PF01243 Pyridoxamine 5'-phosphate oxidase CEJ46_07665 PF06228 Haem utilisation ChuX/HutX CEJ46_07670 PF03544 Gram-negative bacterial TonB protein C-terminal CEJ46_07675 PF01618 MotA/TolQ/ExbB proton channel family CEJ46_07680 PF02472 Biopolymer transport protein ExbD/TolR CEJ46_07690 PF01032 FecCD transport family CEJ46_07695 PF00005 ABC transporter CEJ46_07710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ46_07710 PF00672 HAMP domain CEJ46_07710 PF02743 Cache domain CEJ46_07715 PF01610 Transposase CEJ46_07715 PF13542 Helix-turn-helix domain of transposase family ISL3 CEJ46_07715 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CEJ46_07720 PF00251 Glycosyl hydrolases family 32 N-terminal domain CEJ46_07720 PF08244 Glycosyl hydrolases family 32 C terminal CEJ46_07725 PF00356 Bacterial regulatory proteins, lacI family CEJ46_07730 PF02378 Phosphotransferase system, EIIC CEJ46_07730 PF00367 phosphotransferase system, EIIB CEJ46_07735 PF00294 pfkB family carbohydrate kinase CEJ46_07740 PF00563 EAL domain CEJ46_07740 PF12792 CSS motif domain associated with EAL CEJ46_07745 PF07885 Ion channel CEJ46_07750 PF16591 Helical bimodular sensor domain CEJ46_07750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ46_07750 PF00672 HAMP domain CEJ46_07755 PF02322 Cytochrome bd terminal oxidase subunit II CEJ46_07760 PF01654 Cytochrome bd terminal oxidase subunit I CEJ46_07785 PF05114 Protein of unknown function (DUF692) CEJ46_07800 PF01654 Cytochrome bd terminal oxidase subunit I CEJ46_07805 PF02322 Cytochrome bd terminal oxidase subunit II CEJ46_07815 PF01042 Endoribonuclease L-PSP CEJ46_07835 PF01609 Transposase DDE domain CEJ46_07835 PF13808 DDE_Tnp_1-associated CEJ46_07860 PF01527 Transposase CEJ46_07865 PF13333 Integrase core domain CEJ46_07865 PF00665 Integrase core domain CEJ46_07865 PF13276 HTH-like domain CEJ46_07875 PF13333 Integrase core domain CEJ46_07875 PF00665 Integrase core domain CEJ46_07875 PF13276 HTH-like domain CEJ46_07890 PF00486 Transcriptional regulatory protein, C terminal CEJ46_07905 PF08534 Redoxin CEJ46_07910 PF00171 Aldehyde dehydrogenase family CEJ46_07960 PF08239 Bacterial SH3 domain CEJ46_07960 PF00069 Protein kinase domain CEJ46_07985 PF16697 Inner membrane component of T3SS, cytoplasmic domain CEJ46_08005 PF07478 D-ala D-ala ligase C-terminus CEJ46_08010 PF07724 AAA domain (Cdc48 subfamily) CEJ46_08010 PF00004 ATPase family associated with various cellular activities (AAA) CEJ46_08010 PF10431 C-terminal, D2-small domain, of ClpB protein CEJ46_08010 PF17871 AAA lid domain CEJ46_08055 PF04717 Type VI secretion system, phage-baseplate injector CEJ46_08055 PF16671 Actin cross-linking domain CEJ46_08075 PF01610 Transposase CEJ46_08075 PF13542 Helix-turn-helix domain of transposase family ISL3 CEJ46_08075 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CEJ46_08085 PF02899 Phage integrase, N-terminal SAM-like domain CEJ46_08085 PF00589 Phage integrase family CEJ46_08110 PF00072 Response regulator receiver domain CEJ46_08110 PF00990 Diguanylate cyclase, GGDEF domain CEJ46_08120 PF17967 Pullulanase N2 domain CEJ46_08120 PF18494 Pullulanase Ins domain CEJ46_08120 PF03714 Bacterial pullanase-associated domain CEJ46_08120 PF11852 Domain of unknown function (DUF3372) CEJ46_08120 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CEJ46_08130 PF00072 Response regulator receiver domain CEJ46_08130 PF01584 CheW-like domain CEJ46_08140 PF00072 Response regulator receiver domain CEJ46_08140 PF12431 Transcriptional regulator CEJ46_08145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ46_08145 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CEJ46_08145 PF17203 Single cache domain 3 CEJ46_08145 PF00989 PAS fold CEJ46_08160 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEJ46_08180 PF04204 Homoserine O-succinyltransferase CEJ46_08195 PF05971 RNA methyltransferase CEJ46_08200 PF01863 Protein of unknown function DUF45 CEJ46_08210 PF03466 LysR substrate binding domain CEJ46_08210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ46_08235 PF01032 FecCD transport family CEJ46_08240 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CEJ46_08250 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CEJ46_08255 PF02654 Cobalamin-5-phosphate synthase CEJ46_08265 PF16671 Actin cross-linking domain CEJ46_08265 PF07634 RtxA repeat CEJ46_08265 PF12146 Serine aminopeptidase, S33 CEJ46_08265 PF11647 Membrane Localization Domain CEJ46_08265 PF11713 Peptidase C80 family CEJ46_08270 PF02794 RTX toxin acyltransferase family CEJ46_08280 PF00005 ABC transporter CEJ46_08280 PF03412 Peptidase C39 family CEJ46_08280 PF00664 ABC transporter transmembrane region CEJ46_08290 PF00005 ABC transporter CEJ46_08290 PF03412 Peptidase C39 family CEJ46_08290 PF00664 ABC transporter transmembrane region CEJ46_08295 PF00672 HAMP domain CEJ46_08295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ46_08295 PF02743 Cache domain CEJ46_08300 PF13460 NAD(P)H-binding CEJ46_08310 PF08411 Exonuclease C-terminal CEJ46_08310 PF00929 Exonuclease CEJ46_08315 PF03788 LrgA family CEJ46_08320 PF04172 LrgB-like family CEJ46_08325 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region CEJ46_08325 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CEJ46_08330 PF00563 EAL domain CEJ46_08330 PF13188 PAS domain CEJ46_08330 PF03707 Bacterial signalling protein N terminal repeat CEJ46_08330 PF00990 Diguanylate cyclase, GGDEF domain CEJ46_08335 PF02222 ATP-grasp domain CEJ46_08340 PF13426 PAS domain CEJ46_08340 PF08447 PAS fold CEJ46_08340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ46_08345 PF05724 Thiopurine S-methyltransferase (TPMT) CEJ46_08360 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CEJ46_08360 PF03483 B3/4 domain CEJ46_08360 PF03147 Ferredoxin-fold anticodon binding domain CEJ46_08360 PF03484 tRNA synthetase B5 domain CEJ46_08360 PF01588 Putative tRNA binding domain CEJ46_08365 PF01409 tRNA synthetases class II core domain (F) CEJ46_08365 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CEJ46_08400 PF01066 CDP-alcohol phosphatidyltransferase CEJ46_08405 PF02151 UvrB/uvrC motif CEJ46_08405 PF01541 GIY-YIG catalytic domain CEJ46_08405 PF08459 UvrC Helix-hairpin-helix N-terminal CEJ46_08410 PF00072 Response regulator receiver domain CEJ46_08410 PF00196 Bacterial regulatory proteins, luxR family CEJ46_08415 PF03104 DNA polymerase family B, exonuclease domain CEJ46_08415 PF00136 DNA polymerase family B CEJ46_08425 PF09285 Elongation factor P, C-terminal CEJ46_08425 PF01132 Elongation factor P (EF-P) OB domain CEJ46_08425 PF08207 Elongation factor P (EF-P) KOW-like domain CEJ46_08430 PF04269 Protein of unknown function, DUF440 CEJ46_08440 PF00392 Bacterial regulatory proteins, gntR family CEJ46_08440 PF07702 UTRA domain CEJ46_08445 PF01979 Amidohydrolase family CEJ46_08450 PF00491 Arginase family CEJ46_08455 PF17391 Urocanase N-terminal domain CEJ46_08455 PF17392 Urocanase C-terminal domain CEJ46_08455 PF01175 Urocanase Rossmann-like domain CEJ46_08460 PF00221 Aromatic amino acid lyase CEJ46_08470 PF04191 Phospholipid methyltransferase CEJ46_08475 PF13183 4Fe-4S dicluster domain CEJ46_08475 PF01565 FAD binding domain CEJ46_08475 PF02913 FAD linked oxidases, C-terminal domain CEJ46_08505 PF12241 Trans-2-enoyl-CoA reductase catalytic region CEJ46_08505 PF07055 Enoyl reductase FAD binding domain CEJ46_08505 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase CEJ46_08510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CEJ46_08510 PF09317 Domain of unknown function (DUF1974) CEJ46_08510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CEJ46_08510 PF02770 Acyl-CoA dehydrogenase, middle domain CEJ46_08515 PF16295 Tetracyclin repressor-like, C-terminal domain CEJ46_08515 PF00440 Bacterial regulatory proteins, tetR family CEJ46_08525 PF01609 Transposase DDE domain CEJ46_08525 PF13808 DDE_Tnp_1-associated CEJ46_08540 PF00171 Aldehyde dehydrogenase family CEJ46_08545 PF13188 PAS domain CEJ46_08545 PF00563 EAL domain CEJ46_08545 PF00990 Diguanylate cyclase, GGDEF domain CEJ46_08545 PF03707 Bacterial signalling protein N terminal repeat CEJ46_08560 PF06610 L-alanine exporter CEJ46_08565 PF09308 LuxQ, periplasmic CEJ46_08565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ46_08565 PF00072 Response regulator receiver domain CEJ46_08565 PF00512 His Kinase A (phospho-acceptor) domain CEJ46_08575 PF02445 Quinolinate synthetase A protein CEJ46_08580 PF13525 Outer membrane lipoprotein CEJ46_08580 PF16331 TolA binding protein trimerisation CEJ46_08585 PF00691 OmpA family CEJ46_08600 PF02472 Biopolymer transport protein ExbD/TolR CEJ46_08605 PF01618 MotA/TolQ/ExbB proton channel family CEJ46_08610 PF03061 Thioesterase superfamily CEJ46_08615 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) CEJ46_08620 PF08173 Membrane bound YbgT-like protein CEJ46_08625 PF02322 Cytochrome bd terminal oxidase subunit II CEJ46_08630 PF01654 Cytochrome bd terminal oxidase subunit I CEJ46_08635 PF05496 Holliday junction DNA helicase RuvB P-loop domain CEJ46_08635 PF05491 RuvB C-terminal winged helix domain CEJ46_08635 PF17864 RuvB AAA lid domain CEJ46_08640 PF07499 RuvA, C-terminal domain CEJ46_08640 PF01330 RuvA N terminal domain CEJ46_08645 PF02075 Crossover junction endodeoxyribonuclease RuvC CEJ46_08650 PF01406 tRNA synthetases class I (C) catalytic domain CEJ46_08650 PF09190 DALR domain CEJ46_08655 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CEJ46_08660 PF00149 Calcineurin-like phosphoesterase CEJ46_08665 PF08668 HDOD domain CEJ46_08665 PF00563 EAL domain CEJ46_08670 PF02810 SEC-C motif CEJ46_08685 PF13307 Helicase C-terminal domain CEJ46_08685 PF06733 DEAD_2 CEJ46_08690 PF01925 Sulfite exporter TauE/SafE CEJ46_08695 PF07445 Primosomal replication protein priC CEJ46_08700 PF10689 Protein of unknown function (DUF2496) CEJ46_08705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ46_08705 PF00672 HAMP domain CEJ46_08710 PF03372 Endonuclease/Exonuclease/phosphatase family CEJ46_08715 PF00528 Binding-protein-dependent transport system inner membrane component CEJ46_08720 PF00528 Binding-protein-dependent transport system inner membrane component CEJ46_08725 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEJ46_08730 PF00005 ABC transporter CEJ46_08745 PF02901 Pyruvate formate lyase-like CEJ46_08745 PF01228 Glycine radical CEJ46_08755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ46_08755 PF00672 HAMP domain CEJ46_08760 PF13358 DDE superfamily endonuclease CEJ46_08770 PF04055 Radical SAM superfamily CEJ46_08785 PF08298 PrkA AAA domain CEJ46_08785 PF06798 PrkA serine protein kinase C-terminal domain CEJ46_08790 PF04285 Protein of unknown function (DUF444) CEJ46_08795 PF04293 SpoVR like protein CEJ46_08800 PF02348 Cytidylyltransferase CEJ46_08805 PF03966 Trm112p-like protein CEJ46_08810 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CEJ46_08815 PF00664 ABC transporter transmembrane region CEJ46_08815 PF00005 ABC transporter CEJ46_08820 PF00753 Metallo-beta-lactamase superfamily CEJ46_08820 PF13567 Domain of unknown function (DUF4131) CEJ46_08820 PF03772 Competence protein CEJ46_08830 PF12704 MacB-like periplasmic core domain CEJ46_08830 PF02687 FtsX-like permease family CEJ46_08835 PF00005 ABC transporter CEJ46_08840 PF12704 MacB-like periplasmic core domain CEJ46_08840 PF02687 FtsX-like permease family CEJ46_08850 PF17757 UvrB interaction domain CEJ46_08850 PF03461 TRCF domain CEJ46_08850 PF00270 DEAD/DEAH box helicase CEJ46_08850 PF02559 CarD-like/TRCF domain CEJ46_08850 PF00271 Helicase conserved C-terminal domain CEJ46_08860 PF16458 Beta-prism lectin CEJ46_08860 PF07968 Leukocidin/Hemolysin toxin family CEJ46_08860 PF12563 Hemolytic toxin N terminal CEJ46_08865 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEJ46_08880 PF13036 Peptidoglycan-synthase activator LpoB CEJ46_08880 PF08139 Prokaryotic membrane lipoprotein lipid attachment site CEJ46_08895 PF01230 HIT domain CEJ46_08900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ46_08900 PF00672 HAMP domain CEJ46_08910 PF00392 Bacterial regulatory proteins, gntR family CEJ46_08910 PF07840 FadR C-terminal domain CEJ46_08915 PF06450 Bacterial Na+/H+ antiporter B (NhaB) CEJ46_08920 PF02600 Disulfide bond formation protein DsbB CEJ46_08930 PF08241 Methyltransferase domain CEJ46_08935 PF00155 Aminotransferase class I and II CEJ46_08940 PF04055 Radical SAM superfamily CEJ46_08940 PF06968 Biotin and Thiamin Synthesis associated domain CEJ46_08945 PF00202 Aminotransferase class-III CEJ46_08950 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CEJ46_08950 PF02403 Seryl-tRNA synthetase N-terminal domain CEJ46_08955 PF00004 ATPase family associated with various cellular activities (AAA) CEJ46_08955 PF16193 AAA C-terminal domain CEJ46_08955 PF12002 MgsA AAA+ ATPase C terminal CEJ46_08960 PF03548 Outer membrane lipoprotein carrier protein LolA CEJ46_08965 PF01043 SecA preprotein cross-linking domain CEJ46_08965 PF07516 SecA Wing and Scaffold domain CEJ46_08965 PF07517 SecA DEAD-like domain CEJ46_08965 PF02810 SEC-C motif CEJ46_08970 PF01207 Dihydrouridine synthase (Dus) CEJ46_08975 PF00005 ABC transporter CEJ46_08980 PF02653 Branched-chain amino acid transport system / permease component CEJ46_08990 PF04217 Protein of unknown function, DUF412 CEJ46_08995 PF00871 Acetokinase family CEJ46_09000 PF01515 Phosphate acetyl/butaryl transferase CEJ46_09000 PF07085 DRTGG domain CEJ46_09005 PF13409 Glutathione S-transferase, N-terminal domain CEJ46_09010 PF00005 ABC transporter CEJ46_09010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEJ46_09015 PF00005 ABC transporter CEJ46_09015 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEJ46_09020 PF12911 N-terminal TM domain of oligopeptide transport permease C CEJ46_09020 PF00528 Binding-protein-dependent transport system inner membrane component CEJ46_09025 PF00528 Binding-protein-dependent transport system inner membrane component CEJ46_09030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEJ46_09035 PF03707 Bacterial signalling protein N terminal repeat CEJ46_09035 PF00990 Diguanylate cyclase, GGDEF domain CEJ46_09035 PF00563 EAL domain CEJ46_09045 PF04820 Tryptophan halogenase CEJ46_09065 PF00550 Phosphopantetheine attachment site CEJ46_09070 PF00550 Phosphopantetheine attachment site CEJ46_09080 PF00501 AMP-binding enzyme CEJ46_09080 PF13193 AMP-binding enzyme C-terminal domain CEJ46_09090 PF00535 Glycosyl transferase family 2 CEJ46_09095 PF00221 Aromatic amino acid lyase CEJ46_09120 PF02801 Beta-ketoacyl synthase, C-terminal domain CEJ46_09120 PF00109 Beta-ketoacyl synthase, N-terminal domain CEJ46_09125 PF07977 FabA-like domain CEJ46_09135 PF02801 Beta-ketoacyl synthase, C-terminal domain CEJ46_09135 PF00109 Beta-ketoacyl synthase, N-terminal domain CEJ46_09145 PF06629 MltA-interacting protein MipA CEJ46_09155 PF00990 Diguanylate cyclase, GGDEF domain CEJ46_09165 PF01081 KDPG and KHG aldolase CEJ46_09170 PF02447 GntP family permease CEJ46_09175 PF01202 Shikimate kinase CEJ46_09180 PF00920 Dehydratase family CEJ46_09185 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CEJ46_09185 PF00356 Bacterial regulatory proteins, lacI family CEJ46_09200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ46_09200 PF00672 HAMP domain CEJ46_09200 PF00512 His Kinase A (phospho-acceptor) domain CEJ46_09205 PF00072 Response regulator receiver domain CEJ46_09205 PF00486 Transcriptional regulatory protein, C terminal CEJ46_09210 PF02080 TrkA-C domain CEJ46_09210 PF06826 Predicted Permease Membrane Region CEJ46_09215 PF01810 LysE type translocator CEJ46_09220 PF01037 Lrp/AsnC ligand binding domain CEJ46_09225 PF08019 Phosphoethanolamine transferase EptA/EptB CEJ46_09225 PF00884 Sulfatase CEJ46_09230 PF00512 His Kinase A (phospho-acceptor) domain CEJ46_09230 PF08521 Two-component sensor kinase N-terminal CEJ46_09230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ46_09235 PF00072 Response regulator receiver domain CEJ46_09235 PF00486 Transcriptional regulatory protein, C terminal CEJ46_09245 PF00106 short chain dehydrogenase CEJ46_09255 PF00501 AMP-binding enzyme CEJ46_09270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ46_09270 PF03466 LysR substrate binding domain CEJ46_09295 PF02796 Helix-turn-helix domain of resolvase CEJ46_09295 PF00239 Resolvase, N terminal domain CEJ46_09300 PF01381 Helix-turn-helix CEJ46_09345 PF00990 Diguanylate cyclase, GGDEF domain CEJ46_09355 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CEJ46_09360 PF09619 Type III secretion system lipoprotein chaperone (YscW) CEJ46_09370 PF13404 AsnC-type helix-turn-helix domain CEJ46_09370 PF01037 Lrp/AsnC ligand binding domain CEJ46_09375 PF00291 Pyridoxal-phosphate dependent enzyme CEJ46_09390 PF07690 Major Facilitator Superfamily CEJ46_09405 PF00501 AMP-binding enzyme CEJ46_09410 PF13378 Enolase C-terminal domain-like CEJ46_09415 PF00378 Enoyl-CoA hydratase/isomerase CEJ46_09420 PF12697 Alpha/beta hydrolase family CEJ46_09425 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CEJ46_09425 PF16582 Middle domain of thiamine pyrophosphate CEJ46_09425 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CEJ46_09430 PF00425 chorismate binding enzyme CEJ46_09440 PF00155 Aminotransferase class I and II CEJ46_09450 PF01966 HD domain CEJ46_09450 PF13286 Phosphohydrolase-associated domain CEJ46_09465 PF01343 Peptidase family S49 CEJ46_09465 PF08496 Peptidase family S49 N-terminal CEJ46_09470 PF00106 short chain dehydrogenase CEJ46_09475 PF01584 CheW-like domain CEJ46_09475 PF00072 Response regulator receiver domain CEJ46_09480 PF00480 ROK family CEJ46_09485 PF00224 Pyruvate kinase, barrel domain CEJ46_09485 PF02887 Pyruvate kinase, alpha/beta domain CEJ46_09490 PF01734 Patatin-like phospholipase CEJ46_09500 PF00209 Sodium:neurotransmitter symporter family CEJ46_09510 PF02378 Phosphotransferase system, EIIC CEJ46_09510 PF00367 phosphotransferase system, EIIB CEJ46_09515 PF01026 TatD related DNase CEJ46_09520 PF09115 DNA polymerase III, delta subunit, C terminal CEJ46_09525 PF02223 Thymidylate kinase CEJ46_09530 PF02618 YceG-like family CEJ46_09535 PF01063 Amino-transferase class IV CEJ46_09540 PF00109 Beta-ketoacyl synthase, N-terminal domain CEJ46_09540 PF02801 Beta-ketoacyl synthase, C-terminal domain CEJ46_09545 PF00550 Phosphopantetheine attachment site CEJ46_09555 PF00698 Acyl transferase domain CEJ46_09560 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CEJ46_09560 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CEJ46_09565 PF02504 Fatty acid synthesis protein CEJ46_09570 PF01783 Ribosomal L32p protein family CEJ46_09575 PF02620 Large ribosomal RNA subunit accumulation protein YceD CEJ46_09580 PF02545 Maf-like protein CEJ46_09585 PF01479 S4 domain CEJ46_09585 PF00849 RNA pseudouridylate synthase CEJ46_09590 PF12111 Polyribonucleotide phosphorylase C terminal CEJ46_09590 PF10150 Ribonuclease E/G family CEJ46_09590 PF00575 S1 RNA binding domain CEJ46_09600 PF00465 Iron-containing alcohol dehydrogenase CEJ46_09600 PF00171 Aldehyde dehydrogenase family CEJ46_09605 PF01914 MarC family integral membrane protein CEJ46_09610 PF01118 Semialdehyde dehydrogenase, NAD binding domain CEJ46_09610 PF02774 Semialdehyde dehydrogenase, dimerisation domain CEJ46_09615 PF03553 Na+/H+ antiporter family CEJ46_09625 PF04245 37-kD nucleoid-associated bacterial protein CEJ46_09630 PF07208 Protein of unknown function (DUF1414) CEJ46_09635 PF11893 Domain of unknown function (DUF3413) CEJ46_09635 PF00884 Sulfatase CEJ46_09645 PF00384 Molybdopterin oxidoreductase CEJ46_09650 PF02634 FdhD/NarQ family CEJ46_09670 PF01131 DNA topoisomerase CEJ46_09670 PF01751 Toprim domain CEJ46_09675 PF00462 Glutaredoxin CEJ46_09680 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CEJ46_09680 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CEJ46_09695 PF04333 MlaA lipoprotein CEJ46_09705 PF03918 Cytochrome C biogenesis protein CEJ46_09710 PF08534 Redoxin CEJ46_09715 PF01578 Cytochrome C assembly protein CEJ46_09715 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CEJ46_09720 PF03100 CcmE CEJ46_09730 PF01578 Cytochrome C assembly protein CEJ46_09735 PF03379 CcmB protein CEJ46_09740 PF00005 ABC transporter CEJ46_09750 PF01584 CheW-like domain CEJ46_09760 PF13614 AAA domain CEJ46_09765 PF00072 Response regulator receiver domain CEJ46_09765 PF01339 CheB methylesterase CEJ46_09770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ46_09770 PF01584 CheW-like domain CEJ46_09770 PF02895 Signal transducing histidine kinase, homodimeric domain CEJ46_09770 PF07194 P2 response regulator binding domain CEJ46_09770 PF01627 Hpt domain CEJ46_09775 PF04344 Chemotaxis phosphatase, CheZ CEJ46_09780 PF00072 Response regulator receiver domain CEJ46_09785 PF04542 Sigma-70 region 2 CEJ46_09785 PF04545 Sigma-70, region 4 CEJ46_09785 PF04539 Sigma-70 region 3 CEJ46_09790 PF10609 NUBPL iron-transfer P-loop NTPase CEJ46_09795 PF00448 SRP54-type protein, GTPase domain CEJ46_09800 PF00771 FHIPEP family CEJ46_09805 PF00300 Histidine phosphatase superfamily (branch 1) CEJ46_09810 PF05193 Peptidase M16 inactive domain CEJ46_09810 PF00675 Insulinase (Peptidase family M16) CEJ46_09815 PF06185 YecM protein CEJ46_09820 PF03485 Arginyl tRNA synthetase N terminal domain CEJ46_09820 PF05746 DALR anticodon binding domain CEJ46_09820 PF00750 tRNA synthetases class I (R) CEJ46_09835 PF07670 Nucleoside recognition CEJ46_09835 PF02421 Ferrous iron transport protein B CEJ46_09835 PF07664 Ferrous iron transport protein B C terminus CEJ46_09840 PF04023 FeoA domain CEJ46_09845 PF02311 AraC-like ligand binding domain CEJ46_09845 PF12833 Helix-turn-helix domain CEJ46_09850 PF01297 Zinc-uptake complex component A periplasmic CEJ46_09855 PF00005 ABC transporter CEJ46_09860 PF00950 ABC 3 transport family CEJ46_09865 PF02629 CoA binding domain CEJ46_09865 PF00549 CoA-ligase CEJ46_09870 PF00549 CoA-ligase CEJ46_09870 PF08442 ATP-grasp domain CEJ46_09875 PF00364 Biotin-requiring enzyme CEJ46_09875 PF02817 e3 binding domain CEJ46_09875 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CEJ46_09880 PF02779 Transketolase, pyrimidine binding domain CEJ46_09880 PF16870 2-oxoglutarate dehydrogenase C-terminal CEJ46_09880 PF00676 Dehydrogenase E1 component CEJ46_09880 PF16078 2-oxoglutarate dehydrogenase N-terminus CEJ46_09885 PF13085 2Fe-2S iron-sulfur cluster binding domain CEJ46_09890 PF00890 FAD binding domain CEJ46_09890 PF02910 Fumarate reductase flavoprotein C-term CEJ46_09895 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CEJ46_09900 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CEJ46_09905 PF00285 Citrate synthase, C-terminal domain CEJ46_09910 PF01784 NIF3 (NGG1p interacting factor 3) CEJ46_09920 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CEJ46_09920 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CEJ46_09920 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CEJ46_09920 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CEJ46_09925 PF17206 SeqA protein N-terminal domain CEJ46_09925 PF03925 SeqA protein C-terminal domain CEJ46_09930 PF12697 Alpha/beta hydrolase family CEJ46_09940 PF00258 Flavodoxin CEJ46_09945 PF04172 LrgB-like family CEJ46_09950 PF03788 LrgA family CEJ46_09955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ46_09955 PF03466 LysR substrate binding domain CEJ46_09965 PF01475 Ferric uptake regulator family CEJ46_09970 PF01118 Semialdehyde dehydrogenase, NAD binding domain CEJ46_09970 PF02774 Semialdehyde dehydrogenase, dimerisation domain CEJ46_09975 PF11890 Domain of unknown function (DUF3410) CEJ46_09975 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEJ46_09975 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CEJ46_09980 PF02801 Beta-ketoacyl synthase, C-terminal domain CEJ46_09980 PF00109 Beta-ketoacyl synthase, N-terminal domain CEJ46_09985 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CEJ46_09985 PF01266 FAD dependent oxidoreductase CEJ46_09990 PF03358 NADPH-dependent FMN reductase CEJ46_09995 PF08891 YfcL protein CEJ46_10000 PF04315 Elongation factor P hydroxylase CEJ46_10005 PF03458 UPF0126 domain CEJ46_10010 PF01264 Chorismate synthase CEJ46_10015 PF05175 Methyltransferase small domain CEJ46_10020 PF01713 Smr domain CEJ46_10025 PF01312 FlhB HrpN YscU SpaS Family CEJ46_10030 PF01311 Bacterial export proteins, family 1 CEJ46_10035 PF01313 Bacterial export proteins, family 3 CEJ46_10040 PF00813 FliP family CEJ46_10045 PF04347 Flagellar biosynthesis protein, FliO CEJ46_10050 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CEJ46_10055 PF02154 Flagellar motor switch protein FliM CEJ46_10055 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CEJ46_10075 PF18269 T3SS EscN ATPase C-terminal domain CEJ46_10075 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CEJ46_10085 PF14842 FliG N-terminal domain CEJ46_10085 PF14841 FliG middle domain CEJ46_10085 PF01706 FliG C-terminal domain CEJ46_10090 PF01514 Secretory protein of YscJ/FliF family CEJ46_10090 PF08345 Flagellar M-ring protein C-terminal CEJ46_10095 PF02049 Flagellar hook-basal body complex protein FliE CEJ46_10100 PF00072 Response regulator receiver domain CEJ46_10100 PF00158 Sigma-54 interaction domain CEJ46_10100 PF02954 Bacterial regulatory protein, Fis family CEJ46_10105 PF00512 His Kinase A (phospho-acceptor) domain CEJ46_10105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ46_10110 PF02954 Bacterial regulatory protein, Fis family CEJ46_10110 PF00072 Response regulator receiver domain CEJ46_10110 PF00158 Sigma-54 interaction domain CEJ46_10115 PF02561 Flagellar protein FliS CEJ46_10125 PF02465 Flagellar hook-associated protein 2 N-terminus CEJ46_10125 PF07195 Flagellar hook-associated protein 2 C-terminus CEJ46_10125 PF07196 Flagellin hook IN motif CEJ46_10130 PF03646 FlaG protein CEJ46_10135 PF07196 Flagellin hook IN motif CEJ46_10135 PF00700 Bacterial flagellin C-terminal helical region CEJ46_10135 PF00669 Bacterial flagellin N-terminal helical region CEJ46_10140 PF00669 Bacterial flagellin N-terminal helical region CEJ46_10140 PF07196 Flagellin hook IN motif CEJ46_10140 PF00700 Bacterial flagellin C-terminal helical region CEJ46_10145 PF00700 Bacterial flagellin C-terminal helical region CEJ46_10145 PF00669 Bacterial flagellin N-terminal helical region CEJ46_10145 PF07196 Flagellin hook IN motif CEJ46_10150 PF04261 Dyp-type peroxidase family CEJ46_10155 PF11143 Protein of unknown function (DUF2919) CEJ46_10175 PF03960 ArsC family CEJ46_10180 PF07687 Peptidase dimerisation domain CEJ46_10180 PF01546 Peptidase family M20/M25/M40 CEJ46_10200 PF00701 Dihydrodipicolinate synthetase family CEJ46_10210 PF00578 AhpC/TSA family CEJ46_10215 PF13358 DDE superfamily endonuclease CEJ46_10225 PF00578 AhpC/TSA family CEJ46_10230 PF00672 HAMP domain CEJ46_10230 PF02743 Cache domain CEJ46_10230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ46_10235 PF01594 AI-2E family transporter CEJ46_10245 PF01435 Peptidase family M48 CEJ46_10245 PF13181 Tetratricopeptide repeat CEJ46_10250 PF03960 ArsC family CEJ46_10255 PF03358 NADPH-dependent FMN reductase CEJ46_10270 PF00860 Permease family CEJ46_10275 PF04073 Aminoacyl-tRNA editing domain CEJ46_10280 PF02872 5'-nucleotidase, C-terminal domain CEJ46_10280 PF00149 Calcineurin-like phosphoesterase CEJ46_10285 PF00793 DAHP synthetase I family CEJ46_10290 PF13369 Transglutaminase-like superfamily CEJ46_10295 PF04247 Invasion gene expression up-regulator, SirB CEJ46_10300 PF13847 Methyltransferase domain CEJ46_10300 PF17827 PrmC N-terminal domain CEJ46_10305 PF03462 PCRF domain CEJ46_10305 PF00472 RF-1 domain CEJ46_10310 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CEJ46_10310 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CEJ46_10310 PF01488 Shikimate / quinate 5-dehydrogenase CEJ46_10315 PF03550 Outer membrane lipoprotein LolB CEJ46_10325 PF14572 Phosphoribosyl synthetase-associated domain CEJ46_10325 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CEJ46_10330 PF01195 Peptidyl-tRNA hydrolase CEJ46_10335 PF01926 50S ribosome-binding GTPase CEJ46_10335 PF06071 Protein of unknown function (DUF933) CEJ46_10420 PF00700 Bacterial flagellin C-terminal helical region CEJ46_10420 PF07196 Flagellin hook IN motif CEJ46_10420 PF00669 Bacterial flagellin N-terminal helical region CEJ46_10425 PF00700 Bacterial flagellin C-terminal helical region CEJ46_10425 PF07196 Flagellin hook IN motif CEJ46_10425 PF00669 Bacterial flagellin N-terminal helical region CEJ46_10435 PF00669 Bacterial flagellin N-terminal helical region CEJ46_10440 PF07196 Flagellin hook IN motif CEJ46_10440 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEJ46_10445 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CEJ46_10445 PF10135 Rod binding protein CEJ46_10450 PF02119 Flagellar P-ring protein CEJ46_10455 PF02107 Flagellar L-ring protein CEJ46_10460 PF00460 Flagella basal body rod protein CEJ46_10460 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEJ46_10465 PF00460 Flagella basal body rod protein CEJ46_10465 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEJ46_10470 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEJ46_10470 PF00460 Flagella basal body rod protein CEJ46_10470 PF07559 Flagellar basal body protein FlaE CEJ46_10475 PF13860 FlgD Ig-like domain CEJ46_10475 PF03963 Flagellar hook capping protein - N-terminal region CEJ46_10475 PF13861 FlgD Tudor-like domain CEJ46_10480 PF00460 Flagella basal body rod protein CEJ46_10480 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEJ46_10485 PF00460 Flagella basal body rod protein CEJ46_10490 PF03705 CheR methyltransferase, all-alpha domain CEJ46_10490 PF01739 CheR methyltransferase, SAM binding domain CEJ46_10495 PF01584 CheW-like domain CEJ46_10495 PF00072 Response regulator receiver domain CEJ46_10505 PF04316 Anti-sigma-28 factor, FlgM CEJ46_10590 PF13358 DDE superfamily endonuclease CEJ46_10615 PF00589 Phage integrase family CEJ46_10630 PF00691 OmpA family CEJ46_10630 PF01389 OmpA-like transmembrane domain CEJ46_10635 PF00749 tRNA synthetases class I (E and Q), catalytic domain CEJ46_10640 PF00403 Heavy-metal-associated domain CEJ46_10650 PF02838 Glycosyl hydrolase family 20, domain 2 CEJ46_10650 PF03173 Putative carbohydrate binding domain CEJ46_10650 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain CEJ46_10650 PF00728 Glycosyl hydrolase family 20, catalytic domain CEJ46_10670 PF00849 RNA pseudouridylate synthase CEJ46_10670 PF01479 S4 domain CEJ46_10680 PF00586 AIR synthase related protein, N-terminal domain CEJ46_10680 PF02769 AIR synthase related protein, C-terminal domain CEJ46_10685 PF00551 Formyl transferase CEJ46_10690 PF13230 Glutamine amidotransferases class-II CEJ46_10695 PF13580 SIS domain CEJ46_10700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CEJ46_10700 PF09317 Domain of unknown function (DUF1974) CEJ46_10700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CEJ46_10700 PF02770 Acyl-CoA dehydrogenase, middle domain CEJ46_10710 PF00929 Exonuclease CEJ46_10715 PF00075 RNase H CEJ46_10720 PF08241 Methyltransferase domain CEJ46_10730 PF01476 LysM domain CEJ46_10730 PF01464 Transglycosylase SLT domain CEJ46_10740 PF03372 Endonuclease/Exonuclease/phosphatase family CEJ46_10745 PF00543 Nitrogen regulatory protein P-II CEJ46_10750 PF00034 Cytochrome c CEJ46_10755 PF01171 PP-loop family CEJ46_10755 PF09179 TilS substrate binding domain CEJ46_10755 PF11734 TilS substrate C-terminal domain CEJ46_10760 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CEJ46_10765 PF01336 OB-fold nucleic acid binding domain CEJ46_10765 PF02811 PHP domain CEJ46_10765 PF07733 Bacterial DNA polymerase III alpha NTPase domain CEJ46_10765 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CEJ46_10765 PF14579 Helix-hairpin-helix motif CEJ46_10770 PF01351 Ribonuclease HII CEJ46_10775 PF02684 Lipid-A-disaccharide synthetase CEJ46_10780 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CEJ46_10780 PF00132 Bacterial transferase hexapeptide (six repeats) CEJ46_10785 PF07977 FabA-like domain CEJ46_10790 PF00132 Bacterial transferase hexapeptide (six repeats) CEJ46_10790 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CEJ46_10795 PF03938 Outer membrane protein (OmpH-like) CEJ46_10800 PF01103 Surface antigen CEJ46_10800 PF07244 Surface antigen variable number repeat CEJ46_10805 PF17820 PDZ domain CEJ46_10805 PF02163 Peptidase family M50 CEJ46_10810 PF13288 DXP reductoisomerase C-terminal domain CEJ46_10810 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CEJ46_10810 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CEJ46_10820 PF01255 Putative undecaprenyl diphosphate synthase CEJ46_10825 PF01765 Ribosome recycling factor CEJ46_10830 PF00696 Amino acid kinase family CEJ46_10835 PF00889 Elongation factor TS CEJ46_10840 PF00318 Ribosomal protein S2 CEJ46_10845 PF00557 Metallopeptidase family M24 CEJ46_10855 PF11944 Protein of unknown function (DUF3461) CEJ46_10860 PF04608 Phosphatidylglycerophosphatase A CEJ46_10865 PF00586 AIR synthase related protein, N-terminal domain CEJ46_10865 PF02769 AIR synthase related protein, C-terminal domain CEJ46_10875 PF00885 6,7-dimethyl-8-ribityllumazine synthase CEJ46_10880 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CEJ46_10880 PF00925 GTP cyclohydrolase II CEJ46_10885 PF00677 Lumazine binding domain CEJ46_10890 PF01872 RibD C-terminal domain CEJ46_10890 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CEJ46_10895 PF03477 ATP cone domain CEJ46_10900 PF00171 Aldehyde dehydrogenase family CEJ46_10905 PF01472 PUA domain CEJ46_10905 PF00696 Amino acid kinase family CEJ46_10910 PF07417 Sigma factor-binding transcriptional regulator Crl CEJ46_10925 PF00860 Permease family CEJ46_10930 PF07687 Peptidase dimerisation domain CEJ46_10930 PF01546 Peptidase family M20/M25/M40 CEJ46_10935 PF18030 RimK PreATP-grasp domain CEJ46_10935 PF08443 RimK-like ATP-grasp domain CEJ46_10940 PF18030 RimK PreATP-grasp domain CEJ46_10940 PF08443 RimK-like ATP-grasp domain CEJ46_10950 PF00209 Sodium:neurotransmitter symporter family CEJ46_10955 PF00990 Diguanylate cyclase, GGDEF domain CEJ46_10955 PF00360 Phytochrome region CEJ46_10955 PF00563 EAL domain CEJ46_10955 PF01590 GAF domain CEJ46_10960 PF13358 DDE superfamily endonuclease CEJ46_10970 PF11799 impB/mucB/samB family C-terminal domain CEJ46_10970 PF00817 impB/mucB/samB family CEJ46_10970 PF11798 IMS family HHH motif CEJ46_10980 PF02424 ApbE family CEJ46_10985 PF00970 Oxidoreductase FAD-binding domain CEJ46_10985 PF00175 Oxidoreductase NAD-binding domain CEJ46_10985 PF00111 2Fe-2S iron-sulfur cluster binding domain CEJ46_10990 PF02508 Rnf-Nqr subunit, membrane protein CEJ46_10995 PF02508 Rnf-Nqr subunit, membrane protein CEJ46_11000 PF04205 FMN-binding domain CEJ46_11005 PF03116 NQR2, RnfD, RnfE family CEJ46_11010 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) CEJ46_11010 PF11973 NQRA C-terminal domain CEJ46_11015 PF01722 BolA-like protein CEJ46_11020 PF05175 Methyltransferase small domain CEJ46_11030 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CEJ46_11035 PF07690 Major Facilitator Superfamily CEJ46_11045 PF04542 Sigma-70 region 2 CEJ46_11045 PF04545 Sigma-70, region 4 CEJ46_11055 PF03502 Nucleoside-specific channel-forming protein, Tsx CEJ46_11060 PF02558 Ketopantoate reductase PanE/ApbA CEJ46_11060 PF08546 Ketopantoate reductase PanE/ApbA C terminal CEJ46_11065 PF01965 DJ-1/PfpI family CEJ46_11070 PF00266 Aminotransferase class-V CEJ46_11075 PF02657 Fe-S metabolism associated domain CEJ46_11080 PF00899 ThiF family CEJ46_11085 PF06725 3D domain CEJ46_11085 PF03562 MltA specific insert domain CEJ46_11095 PF00583 Acetyltransferase (GNAT) family CEJ46_11095 PF00696 Amino acid kinase family CEJ46_11105 PF13538 UvrD-like helicase C-terminal domain CEJ46_11110 PF13361 UvrD-like helicase C-terminal domain CEJ46_11110 PF00580 UvrD/REP helicase N-terminal domain CEJ46_11110 PF12705 PD-(D/E)XK nuclease superfamily CEJ46_11115 PF17946 RecC C-terminal domain CEJ46_11130 PF07130 YebG protein CEJ46_11135 PF14602 Hexapeptide repeat of succinyl-transferase CEJ46_11135 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle CEJ46_11145 PF00583 Acetyltransferase (GNAT) family CEJ46_11155 PF01544 CorA-like Mg2+ transporter protein CEJ46_11165 PF00356 Bacterial regulatory proteins, lacI family CEJ46_11170 PF00288 GHMP kinases N terminal domain CEJ46_11170 PF10509 Galactokinase galactose-binding signature CEJ46_11170 PF08544 GHMP kinases C terminal CEJ46_11175 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CEJ46_11175 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CEJ46_11180 PF16363 GDP-mannose 4,6 dehydratase CEJ46_11185 PF01554 MatE CEJ46_11195 PF11849 Domain of unknown function (DUF3369) CEJ46_11200 PF00501 AMP-binding enzyme CEJ46_11205 PF09905 DNA-binding protein VF530 CEJ46_11210 PF03764 Elongation factor G, domain IV CEJ46_11210 PF00679 Elongation factor G C-terminus CEJ46_11210 PF14492 Elongation Factor G, domain II CEJ46_11210 PF03144 Elongation factor Tu domain 2 CEJ46_11210 PF00009 Elongation factor Tu GTP binding domain CEJ46_11215 PF18073 Rubredoxin metal binding domain CEJ46_11225 PF18429 Domain of unknown function (DUF5609) CEJ46_11235 PF01048 Phosphorylase superfamily CEJ46_11240 PF01676 Metalloenzyme superfamily CEJ46_11245 PF00591 Glycosyl transferase family, a/b domain CEJ46_11245 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CEJ46_11245 PF02885 Glycosyl transferase family, helical bundle domain CEJ46_11250 PF01791 DeoC/LacD family aldolase CEJ46_11255 PF01773 Na+ dependent nucleoside transporter N-terminus CEJ46_11255 PF07670 Nucleoside recognition CEJ46_11255 PF07662 Na+ dependent nucleoside transporter C-terminus CEJ46_11260 PF01026 TatD related DNase CEJ46_11270 PF01235 Sodium:alanine symporter family CEJ46_11285 PF03167 Uracil DNA glycosylase superfamily CEJ46_11290 PF01261 Xylose isomerase-like TIM barrel CEJ46_11295 PF01228 Glycine radical CEJ46_11300 PF14821 Threonine synthase N terminus CEJ46_11300 PF00291 Pyridoxal-phosphate dependent enzyme CEJ46_11305 PF00288 GHMP kinases N terminal domain CEJ46_11305 PF08544 GHMP kinases C terminal CEJ46_11310 PF01842 ACT domain CEJ46_11310 PF13840 ACT domain CEJ46_11310 PF00742 Homoserine dehydrogenase CEJ46_11310 PF03447 Homoserine dehydrogenase, NAD binding domain CEJ46_11310 PF00696 Amino acid kinase family CEJ46_11320 PF03737 Aldolase/RraA CEJ46_11325 PF00486 Transcriptional regulatory protein, C terminal CEJ46_11325 PF00072 Response regulator receiver domain CEJ46_11335 PF00072 Response regulator receiver domain CEJ46_11335 PF00512 His Kinase A (phospho-acceptor) domain CEJ46_11335 PF18415 Histidine kinase receptor ArcB trans-membrane domain CEJ46_11335 PF01627 Hpt domain CEJ46_11335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ46_11335 PF00989 PAS fold CEJ46_11340 PF04055 Radical SAM superfamily CEJ46_11340 PF16199 Radical_SAM C-terminal domain CEJ46_11345 PF00310 Glutamine amidotransferases class-II CEJ46_11345 PF01645 Conserved region in glutamate synthase CEJ46_11345 PF01493 GXGXG motif CEJ46_11345 PF04898 Glutamate synthase central domain CEJ46_11350 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CEJ46_11350 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEJ46_11355 PF04898 Glutamate synthase central domain CEJ46_11355 PF01493 GXGXG motif CEJ46_11355 PF01645 Conserved region in glutamate synthase CEJ46_11355 PF00310 Glutamine amidotransferases class-II CEJ46_11360 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CEJ46_11360 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEJ46_11380 PF01497 Periplasmic binding protein CEJ46_11385 PF03458 UPF0126 domain CEJ46_11390 PF03466 LysR substrate binding domain CEJ46_11390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ46_11395 PF01925 Sulfite exporter TauE/SafE CEJ46_11400 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CEJ46_11400 PF02142 MGS-like domain CEJ46_11400 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CEJ46_11405 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CEJ46_11405 PF00117 Glutamine amidotransferase class-I CEJ46_11415 PF00293 NUDIX domain CEJ46_11420 PF07517 SecA DEAD-like domain CEJ46_11420 PF07516 SecA Wing and Scaffold domain CEJ46_11420 PF01043 SecA preprotein cross-linking domain CEJ46_11420 PF02810 SEC-C motif CEJ46_11430 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CEJ46_11435 PF00091 Tubulin/FtsZ family, GTPase domain CEJ46_11435 PF12327 FtsZ family, C-terminal domain CEJ46_11440 PF02491 SHS2 domain inserted in FTSA CEJ46_11445 PF08478 POTRA domain, FtsQ-type CEJ46_11445 PF03799 Cell division protein FtsQ CEJ46_11450 PF08245 Mur ligase middle domain CEJ46_11450 PF02875 Mur ligase family, glutamate ligase domain CEJ46_11450 PF01225 Mur ligase family, catalytic domain CEJ46_11455 PF03033 Glycosyltransferase family 28 N-terminal domain CEJ46_11455 PF04101 Glycosyltransferase family 28 C-terminal domain CEJ46_11460 PF01098 Cell cycle protein CEJ46_11465 PF08245 Mur ligase middle domain CEJ46_11465 PF02875 Mur ligase family, glutamate ligase domain CEJ46_11470 PF00953 Glycosyl transferase family 4 CEJ46_11470 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CEJ46_11475 PF01225 Mur ligase family, catalytic domain CEJ46_11475 PF08245 Mur ligase middle domain CEJ46_11475 PF02875 Mur ligase family, glutamate ligase domain CEJ46_11480 PF08245 Mur ligase middle domain CEJ46_11480 PF02875 Mur ligase family, glutamate ligase domain CEJ46_11480 PF01225 Mur ligase family, catalytic domain CEJ46_11485 PF00905 Penicillin binding protein transpeptidase domain CEJ46_11485 PF03717 Penicillin-binding Protein dimerisation domain CEJ46_11490 PF04999 Cell division protein FtsL CEJ46_11495 PF01795 MraW methylase family CEJ46_11505 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CEJ46_11510 PF04348 LppC putative lipoprotein CEJ46_11515 PF02021 Uncharacterised protein family UPF0102 CEJ46_11520 PF13580 SIS domain CEJ46_11525 PF04972 BON domain CEJ46_11530 PF04386 Stringent starvation protein B CEJ46_11535 PF00043 Glutathione S-transferase, C-terminal domain CEJ46_11535 PF02798 Glutathione S-transferase, N-terminal domain CEJ46_11540 PF02167 Cytochrome C1 family CEJ46_11545 PF00033 Cytochrome b/b6/petB CEJ46_11545 PF00032 Cytochrome b(C-terminal)/b6/petD CEJ46_11550 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CEJ46_11550 PF00355 Rieske [2Fe-2S] domain CEJ46_11555 PF00380 Ribosomal protein S9/S16 CEJ46_11560 PF00572 Ribosomal protein L13 CEJ46_11570 PF03969 AFG1-like ATPase CEJ46_11575 PF06295 Protein of unknown function (DUF1043) CEJ46_11580 PF00595 PDZ domain CEJ46_11585 PF13180 PDZ domain CEJ46_11590 PF00521 DNA gyrase/topoisomerase IV, subunit A CEJ46_11590 PF03989 DNA gyrase C-terminal domain, beta-propeller CEJ46_11595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ46_11595 PF00986 DNA gyrase B subunit, carboxyl terminus CEJ46_11595 PF00204 DNA gyrase B CEJ46_11595 PF01751 Toprim domain CEJ46_11600 PF05728 Uncharacterised protein family (UPF0227) CEJ46_11605 PF00149 Calcineurin-like phosphoesterase CEJ46_11610 PF06853 Protein of unknown function (DUF1249) CEJ46_11615 PF00293 NUDIX domain CEJ46_11620 PF02321 Outer membrane efflux protein CEJ46_11625 PF01467 Cytidylyltransferase-like CEJ46_11625 PF00294 pfkB family carbohydrate kinase CEJ46_11630 PF08335 GlnD PII-uridylyltransferase CEJ46_11630 PF03710 Glutamate-ammonia ligase adenylyltransferase CEJ46_11635 PF00672 HAMP domain CEJ46_11635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ46_11645 PF01928 CYTH domain CEJ46_11650 PF01865 Protein of unknown function DUF47 CEJ46_11655 PF01384 Phosphate transporter family CEJ46_11660 PF08239 Bacterial SH3 domain CEJ46_11670 PF01471 Putative peptidoglycan binding domain CEJ46_11670 PF13401 AAA domain CEJ46_11675 PF01743 Poly A polymerase head domain CEJ46_11675 PF01966 HD domain CEJ46_11675 PF12627 Probable RNA and SrmB- binding site of polymerase A CEJ46_11680 PF00113 Enolase, C-terminal TIM barrel domain CEJ46_11680 PF03952 Enolase, N-terminal domain CEJ46_11685 PF00117 Glutamine amidotransferase class-I CEJ46_11685 PF06418 CTP synthase N-terminus CEJ46_11690 PF03819 MazG nucleotide pyrophosphohydrolase domain CEJ46_11695 PF13291 ACT domain CEJ46_11695 PF02824 TGS domain CEJ46_11695 PF04607 Region found in RelA / SpoT proteins CEJ46_11700 PF05958 tRNA (Uracil-5-)-methyltransferase CEJ46_11700 PF01938 TRAM domain CEJ46_11705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ46_11705 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CEJ46_11705 PF00072 Response regulator receiver domain CEJ46_11705 PF00512 His Kinase A (phospho-acceptor) domain CEJ46_11705 PF00672 HAMP domain CEJ46_11705 PF01627 Hpt domain CEJ46_11710 PF01648 4'-phosphopantetheinyl transferase superfamily CEJ46_11715 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CEJ46_11725 PF01926 50S ribosome-binding GTPase CEJ46_11725 PF07650 KH domain CEJ46_11735 PF10502 Signal peptidase, peptidase S26 CEJ46_11740 PF00009 Elongation factor Tu GTP binding domain CEJ46_11740 PF06421 GTP-binding protein LepA C-terminus CEJ46_11740 PF03144 Elongation factor Tu domain 2 CEJ46_11740 PF00679 Elongation factor G C-terminus CEJ46_11750 PF03888 MucB/RseB N-terminal domain CEJ46_11750 PF17188 MucB/RseB C-terminal domain CEJ46_11755 PF03872 Anti sigma-E protein RseA, N-terminal domain CEJ46_11755 PF03873 Anti sigma-E protein RseA, C-terminal domain CEJ46_11760 PF04542 Sigma-70 region 2 CEJ46_11760 PF08281 Sigma-70, region 4 CEJ46_11765 PF00890 FAD binding domain CEJ46_11765 PF02910 Fumarate reductase flavoprotein C-term CEJ46_11775 PF03937 Flavinator of succinate dehydrogenase CEJ46_11795 PF01494 FAD binding domain CEJ46_11800 PF01494 FAD binding domain CEJ46_11810 PF05164 Cell division protein ZapA CEJ46_11820 PF01812 5-formyltetrahydrofolate cyclo-ligase family CEJ46_11825 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CEJ46_11830 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEJ46_11830 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CEJ46_11830 PF01842 ACT domain CEJ46_11835 PF10369 Small subunit of acetolactate synthase CEJ46_11840 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CEJ46_11840 PF00205 Thiamine pyrophosphate enzyme, central domain CEJ46_11840 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CEJ46_11845 PF00501 AMP-binding enzyme CEJ46_11850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ46_11850 PF03466 LysR substrate binding domain CEJ46_11860 PF01569 PAP2 superfamily CEJ46_11865 PF00682 HMGL-like CEJ46_11865 PF08502 LeuA allosteric (dimerisation) domain CEJ46_11870 PF00180 Isocitrate/isopropylmalate dehydrogenase CEJ46_11875 PF00330 Aconitase family (aconitate hydratase) CEJ46_11880 PF00694 Aconitase C-terminal domain CEJ46_11945 PF03739 Lipopolysaccharide export system permease LptF/LptG CEJ46_11950 PF03739 Lipopolysaccharide export system permease LptF/LptG CEJ46_11955 PF00883 Cytosol aminopeptidase family, catalytic domain CEJ46_11955 PF02789 Cytosol aminopeptidase family, N-terminal domain CEJ46_11960 PF04364 DNA polymerase III chi subunit, HolC CEJ46_11965 PF08264 Anticodon-binding domain of tRNA CEJ46_11965 PF00133 tRNA synthetases class I (I, L, M and V) CEJ46_11965 PF10458 Valyl tRNA synthetase tRNA binding arm CEJ46_11970 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEJ46_11970 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CEJ46_11975 PF00849 RNA pseudouridylate synthase CEJ46_11985 PF18339 RapA N-terminal Tudor like domain 1 CEJ46_11985 PF00176 SNF2 family N-terminal domain CEJ46_11985 PF18337 RapA N-terminal Tudor like domain CEJ46_11985 PF12137 RNA polymerase recycling family C-terminal CEJ46_11985 PF00271 Helicase conserved C-terminal domain CEJ46_11995 PF13638 PIN domain CEJ46_11995 PF02562 PhoH-like protein CEJ46_12000 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CEJ46_12000 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CEJ46_12005 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CEJ46_12005 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CEJ46_12010 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CEJ46_12010 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CEJ46_12015 PF01042 Endoribonuclease L-PSP CEJ46_12025 PF08448 PAS fold CEJ46_12025 PF00512 His Kinase A (phospho-acceptor) domain CEJ46_12025 PF13188 PAS domain CEJ46_12025 PF00072 Response regulator receiver domain CEJ46_12025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ46_12030 PF01553 Acyltransferase CEJ46_12035 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CEJ46_12040 PF01722 BolA-like protein CEJ46_12050 PF05494 MlaC protein CEJ46_12055 PF02470 MlaD protein CEJ46_12060 PF02405 Permease MlaE CEJ46_12065 PF00005 ABC transporter CEJ46_12070 PF01699 Sodium/calcium exchanger protein CEJ46_12075 PF01380 SIS domain CEJ46_12075 PF00571 CBS domain CEJ46_12090 PF03968 OstA-like protein CEJ46_12095 PF12399 Branched-chain amino acid ATP-binding cassette transporter CEJ46_12095 PF00005 ABC transporter CEJ46_12100 PF00309 Sigma-54 factor, Activator interacting domain (AID) CEJ46_12100 PF04963 Sigma-54 factor, core binding domain CEJ46_12100 PF04552 Sigma-54, DNA binding domain CEJ46_12105 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CEJ46_12110 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CEJ46_12115 PF03668 P-loop ATPase protein family CEJ46_12120 PF00381 PTS HPr component phosphorylation site CEJ46_12125 PF03448 MgtE intracellular N domain CEJ46_12125 PF01769 Divalent cation transporter CEJ46_12125 PF00571 CBS domain CEJ46_12130 PF01523 Putative modulator of DNA gyrase CEJ46_12135 PF04751 Protein of unknown function (DUF615) CEJ46_12140 PF00005 ABC transporter CEJ46_12145 PF00528 Binding-protein-dependent transport system inner membrane component CEJ46_12155 PF02441 Flavoprotein CEJ46_12160 PF01225 Mur ligase family, catalytic domain CEJ46_12160 PF02875 Mur ligase family, glutamate ligase domain CEJ46_12160 PF08245 Mur ligase middle domain CEJ46_12165 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CEJ46_12170 PF00719 Inorganic pyrophosphatase CEJ46_12180 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like CEJ46_12185 PF04357 TamB, inner membrane protein subunit of TAM complex CEJ46_12190 PF01103 Surface antigen CEJ46_12190 PF07244 Surface antigen variable number repeat CEJ46_12190 PF17243 POTRA domain TamA domain 1 CEJ46_12195 PF01625 Peptide methionine sulfoxide reductase CEJ46_12200 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) CEJ46_12215 PF00005 ABC transporter CEJ46_12240 PF00009 Elongation factor Tu GTP binding domain CEJ46_12245 PF01507 Phosphoadenosine phosphosulfate reductase family CEJ46_12250 PF14824 Sirohaem biosynthesis protein central CEJ46_12250 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CEJ46_12250 PF10414 Sirohaem synthase dimerisation region CEJ46_12255 PF02872 5'-nucleotidase, C-terminal domain CEJ46_12255 PF00149 Calcineurin-like phosphoesterase CEJ46_12295 PF00270 DEAD/DEAH box helicase CEJ46_12295 PF03880 DbpA RNA binding domain CEJ46_12295 PF00271 Helicase conserved C-terminal domain CEJ46_12300 PF13673 Acetyltransferase (GNAT) domain CEJ46_12305 PF08525 Opacity-associated protein A N-terminal motif CEJ46_12305 PF04225 Opacity-associated protein A LysM-like domain CEJ46_12310 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CEJ46_12310 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CEJ46_12315 PF01196 Ribosomal protein L17 CEJ46_12325 PF01479 S4 domain CEJ46_12325 PF00163 Ribosomal protein S4/S9 N-terminal domain CEJ46_12330 PF00411 Ribosomal protein S11 CEJ46_12335 PF00416 Ribosomal protein S13/S18 CEJ46_12340 PF00444 Ribosomal protein L36 CEJ46_12345 PF00344 SecY translocase CEJ46_12350 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CEJ46_12355 PF00327 Ribosomal protein L30p/L7e CEJ46_12365 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CEJ46_12370 PF00347 Ribosomal protein L6 CEJ46_12375 PF00410 Ribosomal protein S8 CEJ46_12380 PF00253 Ribosomal protein S14p/S29e CEJ46_12385 PF00673 ribosomal L5P family C-terminus CEJ46_12385 PF00281 Ribosomal protein L5 CEJ46_12395 PF00238 Ribosomal protein L14p/L23e CEJ46_12400 PF00366 Ribosomal protein S17 CEJ46_12405 PF00831 Ribosomal L29 protein CEJ46_12410 PF00252 Ribosomal protein L16p/L10e CEJ46_12415 PF00189 Ribosomal protein S3, C-terminal domain CEJ46_12415 PF07650 KH domain CEJ46_12420 PF00237 Ribosomal protein L22p/L17e CEJ46_12425 PF00203 Ribosomal protein S19 CEJ46_12430 PF03947 Ribosomal Proteins L2, C-terminal domain CEJ46_12430 PF00181 Ribosomal Proteins L2, RNA binding domain CEJ46_12435 PF00276 Ribosomal protein L23 CEJ46_12450 PF00338 Ribosomal protein S10p/S20e CEJ46_12455 PF08032 RNA 2'-O ribose methyltransferase substrate binding CEJ46_12455 PF00588 SpoU rRNA Methylase family CEJ46_12460 PF00773 RNB domain CEJ46_12460 PF08206 Ribonuclease B OB domain CEJ46_12460 PF08461 Ribonuclease R winged-helix domain CEJ46_12460 PF17876 Cold shock domain CEJ46_12460 PF00575 S1 RNA binding domain CEJ46_12465 PF08238 Sel1 repeat CEJ46_12475 PF00709 Adenylosuccinate synthetase CEJ46_12480 PF01112 Asparaginase CEJ46_12485 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CEJ46_12490 PF09526 Probable metal-binding protein (DUF2387) CEJ46_12495 PF02254 TrkA-N domain CEJ46_12495 PF00999 Sodium/hydrogen exchanger family CEJ46_12500 PF02525 Flavodoxin-like fold CEJ46_12505 PF12848 ABC transporter CEJ46_12505 PF00005 ABC transporter CEJ46_12515 PF00561 alpha/beta hydrolase fold CEJ46_12520 PF06794 Uncharacterised protein family (UPF0270) CEJ46_12525 PF00485 Phosphoribulokinase / Uridine kinase family CEJ46_12530 PF13545 Crp-like helix-turn-helix domain CEJ46_12530 PF00027 Cyclic nucleotide-binding domain CEJ46_12545 PF04958 Arginine N-succinyltransferase beta subunit CEJ46_12550 PF00202 Aminotransferase class-III CEJ46_12555 PF00117 Glutamine amidotransferase class-I CEJ46_12565 PF01494 FAD binding domain CEJ46_12575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ46_12575 PF03466 LysR substrate binding domain CEJ46_12590 PF00579 tRNA synthetases class I (W and Y) CEJ46_12595 PF13419 Haloacid dehalogenase-like hydrolase CEJ46_12600 PF00834 Ribulose-phosphate 3 epimerase family CEJ46_12605 PF13808 DDE_Tnp_1-associated CEJ46_12605 PF01609 Transposase DDE domain CEJ46_12610 PF02086 D12 class N6 adenine-specific DNA methyltransferase CEJ46_12625 PF01202 Shikimate kinase CEJ46_12630 PF11741 AMIN domain CEJ46_12630 PF07660 Secretin and TonB N terminus short domain CEJ46_12630 PF03958 Bacterial type II/III secretion system short domain CEJ46_12630 PF00263 Bacterial type II and III secretion system protein CEJ46_12655 PF17092 Penicillin-binding protein OB-like domain CEJ46_12655 PF00912 Transglycosylase CEJ46_12655 PF00905 Penicillin binding protein transpeptidase domain CEJ46_12660 PF03466 LysR substrate binding domain CEJ46_12660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ46_12665 PF00462 Glutaredoxin CEJ46_12665 PF08534 Redoxin CEJ46_12670 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEJ46_12670 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CEJ46_12680 PF00583 Acetyltransferase (GNAT) family CEJ46_12680 PF00206 Lyase CEJ46_12680 PF14698 Argininosuccinate lyase C-terminal CEJ46_12685 PF00764 Arginosuccinate synthase CEJ46_12690 PF00696 Amino acid kinase family CEJ46_12695 PF01118 Semialdehyde dehydrogenase, NAD binding domain CEJ46_12695 PF02774 Semialdehyde dehydrogenase, dimerisation domain CEJ46_12715 PF06426 Serine acetyltransferase, N-terminal CEJ46_12715 PF00132 Bacterial transferase hexapeptide (six repeats) CEJ46_12720 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CEJ46_12720 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CEJ46_12725 PF02556 Preprotein translocase subunit SecB CEJ46_12730 PF00581 Rhodanese-like domain CEJ46_12735 PF00152 tRNA synthetases class II (D, K and N) CEJ46_12740 PF02910 Fumarate reductase flavoprotein C-term CEJ46_12740 PF00890 FAD binding domain CEJ46_12745 PF13085 2Fe-2S iron-sulfur cluster binding domain CEJ46_12745 PF13183 4Fe-4S dicluster domain CEJ46_12750 PF02300 Fumarate reductase subunit C CEJ46_12755 PF02313 Fumarate reductase subunit D CEJ46_12760 PF01132 Elongation factor P (EF-P) OB domain CEJ46_12760 PF08207 Elongation factor P (EF-P) KOW-like domain CEJ46_12760 PF09285 Elongation factor P, C-terminal CEJ46_12765 PF04055 Radical SAM superfamily CEJ46_12770 PF02308 MgtC family CEJ46_12780 PF00118 TCP-1/cpn60 chaperonin family CEJ46_12785 PF00166 Chaperonin 10 Kd subunit CEJ46_12810 PF00121 Triosephosphate isomerase CEJ46_12815 PF01554 MatE CEJ46_12820 PF03737 Aldolase/RraA CEJ46_12825 PF01040 UbiA prenyltransferase family CEJ46_12830 PF00004 ATPase family associated with various cellular activities (AAA) CEJ46_12830 PF07724 AAA domain (Cdc48 subfamily) CEJ46_12835 PF00227 Proteasome subunit CEJ46_12845 PF00356 Bacterial regulatory proteins, lacI family CEJ46_12850 PF00270 DEAD/DEAH box helicase CEJ46_12850 PF00271 Helicase conserved C-terminal domain CEJ46_12850 PF17764 3′ DNA-binding domain (3′BD) CEJ46_12850 PF18074 Primosomal protein N C-terminal domain CEJ46_12850 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CEJ46_12855 PF01197 Ribosomal protein L31 CEJ46_12860 PF03949 Malic enzyme, NAD binding domain CEJ46_12860 PF00390 Malic enzyme, N-terminal domain CEJ46_12865 PF01340 Met Apo-repressor, MetJ CEJ46_12870 PF01053 Cys/Met metabolism PLP-dependent enzyme CEJ46_12875 PF00742 Homoserine dehydrogenase CEJ46_12875 PF00696 Amino acid kinase family CEJ46_12875 PF03447 Homoserine dehydrogenase, NAD binding domain CEJ46_12880 PF02219 Methylenetetrahydrofolate reductase CEJ46_12890 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CEJ46_12895 PF00365 Phosphofructokinase CEJ46_12900 PF01545 Cation efflux family CEJ46_12900 PF16916 Dimerisation domain of Zinc Transporter CEJ46_12910 PF00486 Transcriptional regulatory protein, C terminal CEJ46_12910 PF00072 Response regulator receiver domain CEJ46_12915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ46_12915 PF00672 HAMP domain CEJ46_12915 PF00512 His Kinase A (phospho-acceptor) domain CEJ46_12915 PF16527 Two-component sensor protein CpxA, periplasmic domain CEJ46_12920 PF00588 SpoU rRNA Methylase family CEJ46_12925 PF00313 'Cold-shock' DNA-binding domain CEJ46_12930 PF04186 FxsA cytoplasmic membrane protein CEJ46_12935 PF10415 Fumarase C C-terminus CEJ46_12935 PF00206 Lyase CEJ46_12940 PF03605 Anaerobic c4-dicarboxylate membrane transporter CEJ46_12945 PF03606 C4-dicarboxylate anaerobic carrier CEJ46_12955 PF00696 Amino acid kinase family CEJ46_12960 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CEJ46_12960 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CEJ46_12970 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CEJ46_12970 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CEJ46_12975 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CEJ46_12975 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CEJ46_12980 PF01316 Arginine repressor, DNA binding domain CEJ46_12980 PF02863 Arginine repressor, C-terminal domain CEJ46_12985 PF11412 Disulphide bond corrector protein DsbC CEJ46_12985 PF02683 Cytochrome C biogenesis protein transmembrane region CEJ46_12990 PF00072 Response regulator receiver domain CEJ46_12990 PF00196 Bacterial regulatory proteins, luxR family CEJ46_12995 PF03471 Transporter associated domain CEJ46_12995 PF02080 TrkA-C domain CEJ46_12995 PF00999 Sodium/hydrogen exchanger family CEJ46_13005 PF00474 Sodium:solute symporter family CEJ46_13010 PF00672 HAMP domain CEJ46_13010 PF00512 His Kinase A (phospho-acceptor) domain CEJ46_13010 PF01627 Hpt domain CEJ46_13010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ46_13010 PF00072 Response regulator receiver domain CEJ46_13015 PF12832 MFS_1 like family CEJ46_13030 PF00501 AMP-binding enzyme CEJ46_13030 PF16177 Acetyl-coenzyme A synthetase N-terminus CEJ46_13030 PF13193 AMP-binding enzyme C-terminal domain CEJ46_13035 PF01220 Dehydroquinase class II CEJ46_13040 PF00364 Biotin-requiring enzyme CEJ46_13045 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CEJ46_13045 PF00289 Biotin carboxylase, N-terminal domain CEJ46_13045 PF02785 Biotin carboxylase C-terminal domain CEJ46_13055 PF01207 Dihydrouridine synthase (Dus) CEJ46_13060 PF02954 Bacterial regulatory protein, Fis family CEJ46_13065 PF00672 HAMP domain CEJ46_13065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ46_13065 PF17200 Single Cache domain 2 CEJ46_13070 PF13411 MerR HTH family regulatory protein CEJ46_13075 PF01808 AICARFT/IMPCHase bienzyme CEJ46_13075 PF02142 MGS-like domain CEJ46_13080 PF02843 Phosphoribosylglycinamide synthetase, C domain CEJ46_13080 PF02844 Phosphoribosylglycinamide synthetase, N domain CEJ46_13080 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CEJ46_13090 PF00216 Bacterial DNA-binding protein CEJ46_13095 PF00571 CBS domain CEJ46_13095 PF01595 Cyclin M transmembrane N-terminal domain CEJ46_13100 PF04480 Protein of unknown function (DUF559) CEJ46_13105 PF02281 Transposase Tn5 dimerisation domain CEJ46_13105 PF01609 Transposase DDE domain CEJ46_13105 PF14706 Transposase DNA-binding CEJ46_13110 PF04222 Protein of unknown function (DUF416) CEJ46_13115 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEJ46_13120 PF00924 Mechanosensitive ion channel CEJ46_13125 PF00672 HAMP domain CEJ46_13125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ46_13130 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CEJ46_13130 PF00753 Metallo-beta-lactamase superfamily CEJ46_13130 PF10996 Beta-Casp domain CEJ46_13135 PF01609 Transposase DDE domain CEJ46_13135 PF13808 DDE_Tnp_1-associated CEJ46_13140 PF02397 Bacterial sugar transferase CEJ46_13145 PF00535 Glycosyl transferase family 2 CEJ46_13150 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CEJ46_13150 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CEJ46_13150 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CEJ46_13165 PF00535 Glycosyl transferase family 2 CEJ46_13180 PF13614 AAA domain CEJ46_13180 PF13807 G-rich domain on putative tyrosine kinase CEJ46_13180 PF02706 Chain length determinant protein CEJ46_13185 PF01451 Low molecular weight phosphotyrosine protein phosphatase CEJ46_13190 PF02563 Polysaccharide biosynthesis/export protein CEJ46_13190 PF18412 Outer-membrane lipoprotein Wza C-terminal domain CEJ46_13190 PF10531 SLBB domain CEJ46_13200 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF CEJ46_13210 PF06082 Exopolysaccharide biosynthesis protein YbjH CEJ46_13220 PF02397 Bacterial sugar transferase CEJ46_13225 PF01370 NAD dependent epimerase/dehydratase family CEJ46_13230 PF02719 Polysaccharide biosynthesis protein CEJ46_13240 PF00535 Glycosyl transferase family 2 CEJ46_13245 PF05045 Rhamnan synthesis protein F CEJ46_13250 PF00535 Glycosyl transferase family 2 CEJ46_13255 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CEJ46_13265 PF05523 WxcM-like, C-terminal CEJ46_13275 PF00535 Glycosyl transferase family 2 CEJ46_13295 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CEJ46_13295 PF00205 Thiamine pyrophosphate enzyme, central domain CEJ46_13295 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CEJ46_13305 PF00682 HMGL-like CEJ46_13305 PF07836 DmpG-like communication domain CEJ46_13310 PF01118 Semialdehyde dehydrogenase, NAD binding domain CEJ46_13310 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation CEJ46_13315 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CEJ46_13320 PF16363 GDP-mannose 4,6 dehydratase CEJ46_13325 PF00483 Nucleotidyl transferase CEJ46_13330 PF00175 Oxidoreductase NAD-binding domain CEJ46_13330 PF00111 2Fe-2S iron-sulfur cluster binding domain CEJ46_13330 PF00970 Oxidoreductase FAD-binding domain CEJ46_13350 PF00005 ABC transporter CEJ46_13355 PF01061 ABC-2 type transporter CEJ46_13360 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CEJ46_13365 PF04321 RmlD substrate binding domain CEJ46_13370 PF00483 Nucleotidyl transferase CEJ46_13375 PF16363 GDP-mannose 4,6 dehydratase CEJ46_13380 PF01370 NAD dependent epimerase/dehydratase family CEJ46_13390 PF04932 O-Antigen ligase CEJ46_13395 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CEJ46_13405 PF04488 Glycosyltransferase sugar-binding region containing DXD motif CEJ46_13410 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CEJ46_13415 PF00132 Bacterial transferase hexapeptide (six repeats) CEJ46_13420 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CEJ46_13440 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CEJ46_13445 PF00535 Glycosyl transferase family 2 CEJ46_13450 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CEJ46_13455 PF01467 Cytidylyltransferase-like CEJ46_13460 PF06827 Zinc finger found in FPG and IleRS CEJ46_13460 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CEJ46_13460 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CEJ46_13470 PF00471 Ribosomal protein L33 CEJ46_13480 PF04002 RadC-like JAB domain CEJ46_13485 PF02441 Flavoprotein CEJ46_13485 PF04127 DNA / pantothenate metabolism flavoprotein CEJ46_13490 PF00440 Bacterial regulatory proteins, tetR family CEJ46_13495 PF03279 Bacterial lipid A biosynthesis acyltransferase CEJ46_13500 PF03279 Bacterial lipid A biosynthesis acyltransferase CEJ46_13510 PF03725 3' exoribonuclease family, domain 2 CEJ46_13510 PF01138 3' exoribonuclease family, domain 1 CEJ46_13515 PF08340 Domain of unknown function (DUF1732) CEJ46_13515 PF03755 YicC-like family, N-terminal region CEJ46_13530 PF01381 Helix-turn-helix CEJ46_13550 PF05193 Peptidase M16 inactive domain CEJ46_13550 PF00675 Insulinase (Peptidase family M16) CEJ46_13555 PF03350 Uncharacterized protein family, UPF0114 CEJ46_13560 PF01032 FecCD transport family CEJ46_13565 PF01497 Periplasmic binding protein CEJ46_13570 PF00005 ABC transporter CEJ46_13575 PF07715 TonB-dependent Receptor Plug Domain CEJ46_13575 PF00593 TonB dependent receptor CEJ46_13580 PF00005 ABC transporter CEJ46_13580 PF00664 ABC transporter transmembrane region CEJ46_13585 PF02378 Phosphotransferase system, EIIC CEJ46_13585 PF00367 phosphotransferase system, EIIB CEJ46_13590 PF01380 SIS domain CEJ46_13595 PF01380 SIS domain CEJ46_13595 PF01418 Helix-turn-helix domain, rpiR family CEJ46_13610 PF09382 RQC domain CEJ46_13610 PF16124 RecQ zinc-binding CEJ46_13610 PF00570 HRDC domain CEJ46_13610 PF00271 Helicase conserved C-terminal domain CEJ46_13610 PF00270 DEAD/DEAH box helicase CEJ46_13615 PF00892 EamA-like transporter family CEJ46_13630 PF01810 LysE type translocator CEJ46_13635 PF00580 UvrD/REP helicase N-terminal domain CEJ46_13635 PF13361 UvrD-like helicase C-terminal domain CEJ46_13640 PF01432 Peptidase family M3 CEJ46_13645 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CEJ46_13650 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEJ46_13650 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CEJ46_13675 PF12729 Four helix bundle sensory module for signal transduction CEJ46_13675 PF00672 HAMP domain CEJ46_13675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ46_13685 PF00072 Response regulator receiver domain CEJ46_13700 PF12911 N-terminal TM domain of oligopeptide transport permease C CEJ46_13700 PF00528 Binding-protein-dependent transport system inner membrane component CEJ46_13710 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEJ46_13715 PF00005 ABC transporter CEJ46_13715 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEJ46_13745 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CEJ46_13750 PF13361 UvrD-like helicase C-terminal domain CEJ46_13750 PF00580 UvrD/REP helicase N-terminal domain CEJ46_13755 PF08359 YsiA-like protein, C-terminal region CEJ46_13755 PF00440 Bacterial regulatory proteins, tetR family CEJ46_13760 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEJ46_13765 PF00873 AcrB/AcrD/AcrF family CEJ46_13770 PF04380 Membrane fusogenic activity CEJ46_13775 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CEJ46_13775 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CEJ46_13780 PF03466 LysR substrate binding domain CEJ46_13780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ46_13785 PF04055 Radical SAM superfamily CEJ46_13785 PF06969 HemN C-terminal domain CEJ46_13790 PF10675 Protein of unknown function (DUF2489) CEJ46_13795 PF04220 Der GTPase activator (YihI) CEJ46_13805 PF00034 Cytochrome c CEJ46_13810 PF01926 50S ribosome-binding GTPase CEJ46_13815 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CEJ46_13815 PF01612 3'-5' exonuclease CEJ46_13815 PF01367 5'-3' exonuclease, C-terminal SAM fold CEJ46_13815 PF00476 DNA polymerase family A CEJ46_13820 PF00490 Delta-aminolevulinic acid dehydratase CEJ46_13825 PF01026 TatD related DNase CEJ46_13830 PF00902 Sec-independent protein translocase protein (TatC) CEJ46_13835 PF02416 mttA/Hcf106 family CEJ46_13840 PF02416 mttA/Hcf106 family CEJ46_13845 PF03109 ABC1 family CEJ46_13850 PF02036 SCP-2 sterol transfer family CEJ46_13855 PF01209 ubiE/COQ5 methyltransferase family CEJ46_13860 PF02646 RmuC family CEJ46_13870 PF02311 AraC-like ligand binding domain CEJ46_13870 PF12833 Helix-turn-helix domain CEJ46_13880 PF02610 L-arabinose isomerase CEJ46_13880 PF11762 L-arabinose isomerase C-terminal domain CEJ46_13885 PF00596 Class II Aldolase and Adducin N-terminal domain CEJ46_13890 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CEJ46_13890 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CEJ46_13900 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CEJ46_13905 PF00005 ABC transporter CEJ46_13910 PF02653 Branched-chain amino acid transport system / permease component CEJ46_13915 PF06414 Zeta toxin CEJ46_13925 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CEJ46_13925 PF13542 Helix-turn-helix domain of transposase family ISL3 CEJ46_13925 PF01610 Transposase CEJ46_13945 PF11426 Tn7 transposition regulator TnsC CEJ46_13945 PF13401 AAA domain CEJ46_14000 PF03466 LysR substrate binding domain CEJ46_14000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ46_14005 PF14031 Putative serine dehydratase domain CEJ46_14005 PF01168 Alanine racemase, N-terminal domain CEJ46_14010 PF02423 Ornithine cyclodeaminase/mu-crystallin family CEJ46_14015 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CEJ46_14015 PF13542 Helix-turn-helix domain of transposase family ISL3 CEJ46_14015 PF01610 Transposase CEJ46_14030 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CEJ46_14030 PF13542 Helix-turn-helix domain of transposase family ISL3 CEJ46_14030 PF01610 Transposase CEJ46_14095 PF11426 Tn7 transposition regulator TnsC CEJ46_14095 PF13401 AAA domain CEJ46_14120 PF10625 Universal stress protein B (UspB) CEJ46_14125 PF00210 Ferritin-like domain CEJ46_14130 PF00582 Universal stress protein family CEJ46_14135 PF00892 EamA-like transporter family CEJ46_14145 PF04445 Putative SAM-dependent methyltransferase CEJ46_14150 PF01037 Lrp/AsnC ligand binding domain CEJ46_14160 PF07690 Major Facilitator Superfamily CEJ46_14165 PF03466 LysR substrate binding domain CEJ46_14165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ46_14170 PF00557 Metallopeptidase family M24 CEJ46_14170 PF01321 Creatinase/Prolidase N-terminal domain CEJ46_14170 PF01321 Creatinase/Prolidase N-terminal domain CEJ46_14170 PF00557 Metallopeptidase family M24 CEJ46_14175 PF04055 Radical SAM superfamily CEJ46_14175 PF06968 Biotin and Thiamin Synthesis associated domain CEJ46_14180 PF05690 Thiazole biosynthesis protein ThiG CEJ46_14185 PF02597 ThiS family CEJ46_14190 PF00899 ThiF family CEJ46_14195 PF02581 Thiamine monophosphate synthase CEJ46_14200 PF13667 ThiC-associated domain CEJ46_14200 PF01964 Radical SAM ThiC family CEJ46_14205 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CEJ46_14285 PF12724 Flavodoxin domain CEJ46_14290 PF02386 Cation transport protein CEJ46_14295 PF01205 Uncharacterized protein family UPF0029 CEJ46_14295 PF09186 Domain of unknown function (DUF1949) CEJ46_14300 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CEJ46_14300 PF00378 Enoyl-CoA hydratase/isomerase CEJ46_14300 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CEJ46_14305 PF02803 Thiolase, C-terminal domain CEJ46_14305 PF00108 Thiolase, N-terminal domain CEJ46_14310 PF03466 LysR substrate binding domain CEJ46_14310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ46_14315 PF07690 Major Facilitator Superfamily CEJ46_14320 PF12804 MobA-like NTP transferase domain CEJ46_14320 PF14602 Hexapeptide repeat of succinyl-transferase CEJ46_14320 PF00132 Bacterial transferase hexapeptide (six repeats) CEJ46_14325 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CEJ46_14325 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CEJ46_14330 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CEJ46_14330 PF02874 ATP synthase alpha/beta family, beta-barrel domain CEJ46_14335 PF00231 ATP synthase CEJ46_14340 PF02874 ATP synthase alpha/beta family, beta-barrel domain CEJ46_14340 PF00306 ATP synthase alpha/beta chain, C terminal domain CEJ46_14340 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CEJ46_14345 PF00213 ATP synthase delta (OSCP) subunit CEJ46_14350 PF00430 ATP synthase B/B' CF(0) CEJ46_14355 PF00137 ATP synthase subunit C CEJ46_14360 PF00119 ATP synthase A chain CEJ46_14365 PF03899 ATP synthase I chain CEJ46_14370 PF02195 ParB-like nuclease domain CEJ46_14370 PF17762 HTH domain found in ParB protein CEJ46_14375 PF13614 AAA domain CEJ46_14380 PF02527 rRNA small subunit methyltransferase G CEJ46_14385 PF13932 GidA associated domain CEJ46_14385 PF01134 Glucose inhibited division protein A CEJ46_14410 PF01709 Transcriptional regulator CEJ46_14415 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CEJ46_14415 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CEJ46_14420 PF03222 Tryptophan/tyrosine permease family CEJ46_14450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ46_14450 PF03466 LysR substrate binding domain CEJ46_14455 PF13460 NAD(P)H-binding CEJ46_14465 PF03733 Inner membrane component domain CEJ46_14485 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CEJ46_14485 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CEJ46_14490 PF06029 AlkA N-terminal domain CEJ46_14490 PF00730 HhH-GPD superfamily base excision DNA repair protein CEJ46_14495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ46_14495 PF03466 LysR substrate binding domain CEJ46_14510 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CEJ46_14520 PF01551 Peptidase family M23 CEJ46_14520 PF04225 Opacity-associated protein A LysM-like domain CEJ46_14525 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CEJ46_14525 PF02378 Phosphotransferase system, EIIC CEJ46_14525 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CEJ46_14530 PF08125 Mannitol dehydrogenase C-terminal domain CEJ46_14530 PF01232 Mannitol dehydrogenase Rossmann domain CEJ46_14535 PF05068 Mannitol repressor CEJ46_14540 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CEJ46_14545 PF03600 Citrate transporter CEJ46_14550 PF00375 Sodium:dicarboxylate symporter family CEJ46_14555 PF07681 DoxX CEJ46_14575 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEJ46_14575 PF00529 HlyD membrane-fusion protein of T1SS CEJ46_14580 PF01047 MarR family CEJ46_14585 PF04393 Protein of unknown function (DUF535) CEJ46_14590 PF04244 Deoxyribodipyrimidine photo-lyase-related protein CEJ46_14595 PF00581 Rhodanese-like domain CEJ46_14605 PF00005 ABC transporter CEJ46_14620 PF08402 TOBE domain CEJ46_14620 PF00005 ABC transporter CEJ46_14630 PF00528 Binding-protein-dependent transport system inner membrane component CEJ46_14645 PF07702 UTRA domain CEJ46_14645 PF00392 Bacterial regulatory proteins, gntR family CEJ46_14650 PF00270 DEAD/DEAH box helicase CEJ46_14650 PF00271 Helicase conserved C-terminal domain CEJ46_14655 PF01042 Endoribonuclease L-PSP CEJ46_14660 PF13419 Haloacid dehalogenase-like hydrolase CEJ46_14670 PF04055 Radical SAM superfamily CEJ46_14675 PF11230 Protein of unknown function (DUF3029) CEJ46_14685 PF00107 Zinc-binding dehydrogenase CEJ46_14685 PF16884 N-terminal domain of oxidoreductase CEJ46_14690 PF00440 Bacterial regulatory proteins, tetR family CEJ46_14690 PF16925 Tetracyclin repressor-like, C-terminal domain CEJ46_14705 PF00486 Transcriptional regulatory protein, C terminal CEJ46_14705 PF00072 Response regulator receiver domain CEJ46_14715 PF00849 RNA pseudouridylate synthase CEJ46_14770 PF10431 C-terminal, D2-small domain, of ClpB protein CEJ46_14770 PF17871 AAA lid domain CEJ46_14770 PF07724 AAA domain (Cdc48 subfamily) CEJ46_14770 PF00004 ATPase family associated with various cellular activities (AAA) CEJ46_14800 PF04717 Type VI secretion system, phage-baseplate injector CEJ46_14800 PF16671 Actin cross-linking domain CEJ46_14850 PF00939 Sodium:sulfate symporter transmembrane region CEJ46_14855 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) CEJ46_14860 PF08329 Chitinase A, N-terminal domain CEJ46_14860 PF00704 Glycosyl hydrolases family 18 CEJ46_14865 PF00392 Bacterial regulatory proteins, gntR family CEJ46_14865 PF07702 UTRA domain CEJ46_14870 PF00005 ABC transporter CEJ46_14880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ46_14880 PF00672 HAMP domain CEJ46_14900 PF01569 PAP2 superfamily CEJ46_14905 PF04286 Protein of unknown function (DUF445) CEJ46_14910 PF00664 ABC transporter transmembrane region CEJ46_14910 PF00005 ABC transporter CEJ46_14920 PF00563 EAL domain CEJ46_14920 PF00990 Diguanylate cyclase, GGDEF domain CEJ46_14920 PF03707 Bacterial signalling protein N terminal repeat CEJ46_14930 PF01261 Xylose isomerase-like TIM barrel CEJ46_14935 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CEJ46_14945 PF00596 Class II Aldolase and Adducin N-terminal domain CEJ46_14950 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CEJ46_14955 PF03611 PTS system sugar-specific permease component CEJ46_14960 PF08220 DeoR-like helix-turn-helix domain CEJ46_14960 PF00455 DeoR C terminal sensor domain CEJ46_14970 PF00128 Alpha amylase, catalytic domain CEJ46_14970 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CEJ46_14975 PF02264 LamB porin CEJ46_14980 PF07148 Maltose operon periplasmic protein precursor (MalM) CEJ46_14995 PF00375 Sodium:dicarboxylate symporter family CEJ46_15005 PF02630 SCO1/SenC CEJ46_15020 PF03616 Sodium/glutamate symporter CEJ46_15025 PF12945 Flagellar protein YcgR CEJ46_15025 PF07238 PilZ domain CEJ46_15045 PF00529 HlyD membrane-fusion protein of T1SS CEJ46_15045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEJ46_15050 PF11742 Protein of unknown function (DUF3302) CEJ46_15055 PF00990 Diguanylate cyclase, GGDEF domain CEJ46_15070 PF01048 Phosphorylase superfamily CEJ46_15075 PF08349 Protein of unknown function (DUF1722) CEJ46_15080 PF13411 MerR HTH family regulatory protein CEJ46_15085 PF00875 DNA photolyase CEJ46_15085 PF03441 FAD binding domain of DNA photolyase CEJ46_15090 PF17969 L,D-transpeptidase C-terminal domain CEJ46_15090 PF01476 LysM domain CEJ46_15090 PF03734 L,D-transpeptidase catalytic domain CEJ46_15100 PF00271 Helicase conserved C-terminal domain CEJ46_15100 PF00270 DEAD/DEAH box helicase CEJ46_15110 PF01609 Transposase DDE domain CEJ46_15110 PF13808 DDE_Tnp_1-associated CEJ46_15120 PF00593 TonB dependent receptor CEJ46_15120 PF07715 TonB-dependent Receptor Plug Domain CEJ46_15140 PF12262 Bacterial virulence factor lipase N-terminal CEJ46_15145 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CEJ46_15150 PF00128 Alpha amylase, catalytic domain CEJ46_15155 PF00248 Aldo/keto reductase family CEJ46_15165 PF00005 ABC transporter CEJ46_15165 PF12704 MacB-like periplasmic core domain CEJ46_15165 PF02687 FtsX-like permease family CEJ46_15170 PF12704 MacB-like periplasmic core domain CEJ46_15170 PF02687 FtsX-like permease family CEJ46_15185 PF06580 Histidine kinase CEJ46_15185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ46_15190 PF04397 LytTr DNA-binding domain CEJ46_15190 PF00072 Response regulator receiver domain CEJ46_15195 PF00563 EAL domain CEJ46_15195 PF01590 GAF domain CEJ46_15195 PF00360 Phytochrome region CEJ46_15195 PF00990 Diguanylate cyclase, GGDEF domain CEJ46_15205 PF03605 Anaerobic c4-dicarboxylate membrane transporter CEJ46_15215 PF00072 Response regulator receiver domain CEJ46_15220 PF00512 His Kinase A (phospho-acceptor) domain CEJ46_15220 PF00072 Response regulator receiver domain CEJ46_15220 PF01627 Hpt domain CEJ46_15220 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CEJ46_15220 PF00672 HAMP domain CEJ46_15220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ46_15225 PF00672 HAMP domain CEJ46_15225 PF12729 Four helix bundle sensory module for signal transduction CEJ46_15225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ46_15230 PF13520 Amino acid permease CEJ46_15250 PF00175 Oxidoreductase NAD-binding domain CEJ46_15250 PF00111 2Fe-2S iron-sulfur cluster binding domain CEJ46_15250 PF00970 Oxidoreductase FAD-binding domain CEJ46_15255 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CEJ46_15255 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CEJ46_15260 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CEJ46_15260 PF00672 HAMP domain CEJ46_15260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ46_15260 PF00512 His Kinase A (phospho-acceptor) domain CEJ46_15260 PF01627 Hpt domain CEJ46_15260 PF00072 Response regulator receiver domain CEJ46_15275 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEJ46_15280 PF00873 AcrB/AcrD/AcrF family CEJ46_15290 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CEJ46_15295 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CEJ46_15300 PF02566 OsmC-like protein CEJ46_15305 PF14602 Hexapeptide repeat of succinyl-transferase CEJ46_15305 PF12464 Maltose acetyltransferase CEJ46_15310 PF00892 EamA-like transporter family CEJ46_15320 PF03466 LysR substrate binding domain CEJ46_15320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ46_15330 PF03466 LysR substrate binding domain CEJ46_15330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ46_15335 PF00501 AMP-binding enzyme CEJ46_15335 PF13193 AMP-binding enzyme C-terminal domain CEJ46_15340 PF00351 Biopterin-dependent aromatic amino acid hydroxylase CEJ46_15345 PF01329 Pterin 4 alpha carbinolamine dehydratase CEJ46_15355 PF01554 MatE CEJ46_15360 PF12833 Helix-turn-helix domain CEJ46_15360 PF02311 AraC-like ligand binding domain CEJ46_15365 PF11849 Domain of unknown function (DUF3369) CEJ46_15370 PF00512 His Kinase A (phospho-acceptor) domain CEJ46_15370 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEJ46_15370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ46_15380 PF07690 Major Facilitator Superfamily CEJ46_15390 PF00012 Hsp70 protein CEJ46_15400 PF01037 Lrp/AsnC ligand binding domain CEJ46_15405 PF00657 GDSL-like Lipase/Acylhydrolase CEJ46_15410 PF16458 Beta-prism lectin CEJ46_15410 PF07968 Leukocidin/Hemolysin toxin family CEJ46_15410 PF12563 Hemolytic toxin N terminal CEJ46_15415 PF00561 alpha/beta hydrolase fold CEJ46_15420 PF03280 Proteobacterial lipase chaperone protein CEJ46_15425 PF00801 PKD domain CEJ46_15425 PF05547 Immune inhibitor A peptidase M6 CEJ46_15440 PF01752 Collagenase CEJ46_15440 PF08453 Peptidase family M9 N-terminal CEJ46_15440 PF04151 Bacterial pre-peptidase C-terminal domain CEJ46_15450 PF01497 Periplasmic binding protein CEJ46_15455 PF01032 FecCD transport family CEJ46_15460 PF01032 FecCD transport family CEJ46_15465 PF00005 ABC transporter CEJ46_15470 PF00871 Acetokinase family CEJ46_15480 PF13673 Acetyltransferase (GNAT) domain CEJ46_15485 PF00892 EamA-like transporter family CEJ46_15490 PF01699 Sodium/calcium exchanger protein CEJ46_15495 PF03741 Integral membrane protein TerC family CEJ46_15520 PF03466 LysR substrate binding domain CEJ46_15520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ46_15530 PF00717 Peptidase S24-like CEJ46_15535 PF11799 impB/mucB/samB family C-terminal domain CEJ46_15535 PF11798 IMS family HHH motif CEJ46_15535 PF13438 Domain of unknown function (DUF4113) CEJ46_15535 PF00817 impB/mucB/samB family CEJ46_15565 PF02347 Glycine cleavage system P-protein CEJ46_15575 PF00464 Serine hydroxymethyltransferase CEJ46_15585 PF08669 Glycine cleavage T-protein C-terminal barrel domain CEJ46_15585 PF01571 Aminomethyltransferase folate-binding domain CEJ46_15600 PF00675 Insulinase (Peptidase family M16) CEJ46_15600 PF05193 Peptidase M16 inactive domain CEJ46_15615 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CEJ46_15615 PF02378 Phosphotransferase system, EIIC CEJ46_15620 PF00294 pfkB family carbohydrate kinase CEJ46_15625 PF00381 PTS HPr component phosphorylation site CEJ46_15625 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CEJ46_15630 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CEJ46_15630 PF00356 Bacterial regulatory proteins, lacI family CEJ46_15635 PF00149 Calcineurin-like phosphoesterase CEJ46_15635 PF12320 Type 5 capsule protein repressor C-terminal domain CEJ46_15640 PF13476 AAA domain CEJ46_15645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ46_15645 PF00072 Response regulator receiver domain CEJ46_15650 PF00155 Aminotransferase class I and II CEJ46_15660 PF00654 Voltage gated chloride channel CEJ46_15665 PF07683 Cobalamin synthesis protein cobW C-terminal domain CEJ46_15665 PF02492 CobW/HypB/UreG, nucleotide-binding domain CEJ46_15670 PF00005 ABC transporter CEJ46_15675 PF02687 FtsX-like permease family CEJ46_15675 PF00005 ABC transporter CEJ46_15675 PF12704 MacB-like periplasmic core domain CEJ46_15680 PF00005 ABC transporter CEJ46_15680 PF02687 FtsX-like permease family CEJ46_15680 PF12704 MacB-like periplasmic core domain CEJ46_15695 PF01926 50S ribosome-binding GTPase CEJ46_15720 PF01609 Transposase DDE domain CEJ46_15720 PF13808 DDE_Tnp_1-associated CEJ46_15735 PF03608 PTS system enzyme II sorbitol-specific factor CEJ46_15740 PF03612 Sorbitol phosphotransferase enzyme II N-terminus CEJ46_15740 PF07663 Sorbitol phosphotransferase enzyme II C-terminus CEJ46_15745 PF03829 PTS system glucitol/sorbitol-specific IIA component CEJ46_15750 PF00106 short chain dehydrogenase CEJ46_15755 PF06923 Glucitol operon activator protein (GutM) CEJ46_15760 PF08220 DeoR-like helix-turn-helix domain CEJ46_15760 PF00455 DeoR C terminal sensor domain CEJ46_15765 PF03608 PTS system enzyme II sorbitol-specific factor CEJ46_15770 PF03612 Sorbitol phosphotransferase enzyme II N-terminus CEJ46_15770 PF07663 Sorbitol phosphotransferase enzyme II C-terminus CEJ46_15775 PF03829 PTS system glucitol/sorbitol-specific IIA component CEJ46_15780 PF17912 MalK OB fold domain CEJ46_15780 PF00005 ABC transporter CEJ46_15780 PF03459 TOBE domain CEJ46_15790 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CEJ46_15790 PF00132 Bacterial transferase hexapeptide (six repeats) CEJ46_15800 PF13416 Bacterial extracellular solute-binding protein CEJ46_15805 PF00528 Binding-protein-dependent transport system inner membrane component CEJ46_15810 PF00528 Binding-protein-dependent transport system inner membrane component CEJ46_15815 PF00128 Alpha amylase, catalytic domain CEJ46_15815 PF02903 Alpha amylase, N-terminal ig-like domain CEJ46_15815 PF16657 Maltogenic Amylase, C-terminal domain CEJ46_15835 PF07549 SecD/SecF GG Motif CEJ46_15835 PF13721 SecD export protein N-terminal TM region CEJ46_15835 PF02355 Protein export membrane protein CEJ46_15840 PF02355 Protein export membrane protein CEJ46_15840 PF07549 SecD/SecF GG Motif CEJ46_15850 PF03264 NapC/NirT cytochrome c family, N-terminal region CEJ46_15855 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) CEJ46_15860 PF00384 Molybdopterin oxidoreductase CEJ46_15860 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CEJ46_15860 PF01568 Molydopterin dinucleotide binding domain CEJ46_15870 PF12838 4Fe-4S dicluster domain CEJ46_15870 PF13187 4Fe-4S dicluster domain CEJ46_15875 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CEJ46_15875 PF00672 HAMP domain CEJ46_15875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ46_15875 PF07730 Histidine kinase CEJ46_15880 PF00196 Bacterial regulatory proteins, luxR family CEJ46_15880 PF00072 Response regulator receiver domain CEJ46_15885 PF03606 C4-dicarboxylate anaerobic carrier CEJ46_15910 PF12849 PBP superfamily domain CEJ46_15920 PF00773 RNB domain CEJ46_15920 PF08206 Ribonuclease B OB domain CEJ46_15920 PF00575 S1 RNA binding domain CEJ46_15925 PF00270 DEAD/DEAH box helicase CEJ46_15925 PF00271 Helicase conserved C-terminal domain CEJ46_15925 PF03880 DbpA RNA binding domain CEJ46_15930 PF02824 TGS domain CEJ46_15930 PF03129 Anticodon binding domain CEJ46_15930 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CEJ46_15930 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CEJ46_15935 PF05198 Translation initiation factor IF-3, N-terminal domain CEJ46_15935 PF00707 Translation initiation factor IF-3, C-terminal domain CEJ46_15940 PF01632 Ribosomal protein L35 CEJ46_15945 PF00453 Ribosomal protein L20 CEJ46_15950 PF00589 Phage integrase family CEJ46_15950 PF13495 Phage integrase, N-terminal SAM-like domain CEJ46_16130 PF13417 Glutathione S-transferase, N-terminal domain CEJ46_16295 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ CEJ46_16340 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) CEJ46_16365 PF07859 alpha/beta hydrolase fold CEJ46_16390 PF00561 alpha/beta hydrolase fold CEJ46_16600 PF01636 Phosphotransferase enzyme family CEJ46_16680 PF08212 Lipocalin-like domain CEJ46_16685 PF13808 DDE_Tnp_1-associated CEJ46_16685 PF01609 Transposase DDE domain CEJ46_16810 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CEJ46_16825 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CEJ46_16865 PF03466 LysR substrate binding domain CEJ46_16865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ46_16945 PF01636 Phosphotransferase enzyme family CEJ46_16955 PF13302 Acetyltransferase (GNAT) domain CEJ46_16965 PF13358 DDE superfamily endonuclease CEJ46_16970 PF13808 DDE_Tnp_1-associated CEJ46_16970 PF01609 Transposase DDE domain CEJ46_17055 PF13417 Glutathione S-transferase, N-terminal domain CEJ46_17060 PF00561 alpha/beta hydrolase fold CEJ46_17095 PF01609 Transposase DDE domain CEJ46_17095 PF13808 DDE_Tnp_1-associated CEJ46_17115 PF01253 Translation initiation factor SUI1 CEJ46_17130 PF01820 D-ala D-ala ligase N-terminus CEJ46_17130 PF07478 D-ala D-ala ligase C-terminus CEJ46_17140 PF13380 CoA binding domain CEJ46_17140 PF13607 Succinyl-CoA ligase like flavodoxin domain CEJ46_17140 PF00583 Acetyltransferase (GNAT) family CEJ46_17145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ46_17145 PF03466 LysR substrate binding domain CEJ46_17175 PF03701 Uncharacterised protein family (UPF0181) CEJ46_17190 PF00072 Response regulator receiver domain CEJ46_17190 PF00486 Transcriptional regulatory protein, C terminal CEJ46_17200 PF02233 NAD(P) transhydrogenase beta subunit CEJ46_17205 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CEJ46_17205 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CEJ46_17205 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CEJ46_17220 PF00990 Diguanylate cyclase, GGDEF domain CEJ46_17225 PF00313 'Cold-shock' DNA-binding domain CEJ46_17235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ46_17235 PF17200 Single Cache domain 2 CEJ46_17235 PF00672 HAMP domain CEJ46_17255 PF00043 Glutathione S-transferase, C-terminal domain CEJ46_17255 PF02798 Glutathione S-transferase, N-terminal domain CEJ46_17260 PF00132 Bacterial transferase hexapeptide (six repeats) CEJ46_17260 PF03479 Plants and Prokaryotes Conserved (PCC) domain CEJ46_17260 PF12804 MobA-like NTP transferase domain CEJ46_17265 PF00005 ABC transporter CEJ46_17265 PF12848 ABC transporter CEJ46_17270 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEJ46_17270 PF12793 Sugar transport-related sRNA regulator N-term CEJ46_17280 PF03061 Thioesterase superfamily CEJ46_17290 PF03831 PhnA domain CEJ46_17290 PF08274 PhnA Zinc-Ribbon CEJ46_17300 PF03741 Integral membrane protein TerC family CEJ46_17305 PF02872 5'-nucleotidase, C-terminal domain CEJ46_17305 PF00149 Calcineurin-like phosphoesterase CEJ46_17310 PF11398 Protein of unknown function (DUF2813) CEJ46_17315 PF06496 Protein of unknown function (DUF1097) CEJ46_17320 PF03466 LysR substrate binding domain CEJ46_17320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ46_17325 PF01226 Formate/nitrite transporter CEJ46_17335 PF00854 POT family CEJ46_17345 PF07702 UTRA domain CEJ46_17345 PF00392 Bacterial regulatory proteins, gntR family CEJ46_17350 PF01272 Transcription elongation factor, GreA/GreB, C-term CEJ46_17350 PF14760 Rnk N-terminus CEJ46_17355 PF13419 Haloacid dehalogenase-like hydrolase CEJ46_17365 PF13808 DDE_Tnp_1-associated CEJ46_17365 PF01609 Transposase DDE domain CEJ46_17370 PF11953 Domain of unknown function (DUF3470) CEJ46_17370 PF00037 4Fe-4S binding domain CEJ46_17375 PF00588 SpoU rRNA Methylase family CEJ46_17375 PF08032 RNA 2'-O ribose methyltransferase substrate binding CEJ46_17380 PF01268 Formate--tetrahydrofolate ligase CEJ46_17385 PF01641 SelR domain CEJ46_17385 PF01625 Peptide methionine sulfoxide reductase CEJ46_17390 PF01227 GTP cyclohydrolase I CEJ46_17395 PF00994 Probable molybdopterin binding domain CEJ46_17395 PF03454 MoeA C-terminal region (domain IV) CEJ46_17395 PF03453 MoeA N-terminal region (domain I and II) CEJ46_17400 PF00899 ThiF family CEJ46_17405 PF00581 Rhodanese-like domain CEJ46_17410 PF00704 Glycosyl hydrolases family 18 CEJ46_17410 PF08329 Chitinase A, N-terminal domain CEJ46_17420 PF00923 Transaldolase/Fructose-6-phosphate aldolase CEJ46_17425 PF00456 Transketolase, thiamine diphosphate binding domain CEJ46_17425 PF02780 Transketolase, C-terminal domain CEJ46_17425 PF02779 Transketolase, pyrimidine binding domain CEJ46_17440 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CEJ46_17440 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CEJ46_17445 PF13419 Haloacid dehalogenase-like hydrolase CEJ46_17450 PF00672 HAMP domain CEJ46_17450 PF12729 Four helix bundle sensory module for signal transduction CEJ46_17450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ46_17455 PF04264 YceI-like domain CEJ46_17460 PF01292 Prokaryotic cytochrome b561 CEJ46_17470 PF00360 Phytochrome region CEJ46_17470 PF00990 Diguanylate cyclase, GGDEF domain CEJ46_17470 PF01590 GAF domain CEJ46_17470 PF00563 EAL domain CEJ46_17475 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEJ46_17475 PF00005 ABC transporter CEJ46_17480 PF12911 N-terminal TM domain of oligopeptide transport permease C CEJ46_17480 PF00528 Binding-protein-dependent transport system inner membrane component CEJ46_17485 PF00528 Binding-protein-dependent transport system inner membrane component CEJ46_17490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEJ46_17505 PF18030 RimK PreATP-grasp domain CEJ46_17505 PF08443 RimK-like ATP-grasp domain CEJ46_17510 PF00155 Aminotransferase class I and II CEJ46_17520 PF03477 ATP cone domain CEJ46_17520 PF13597 Anaerobic ribonucleoside-triphosphate reductase CEJ46_17525 PF07694 5TMR of 5TMR-LYT CEJ46_17525 PF00990 Diguanylate cyclase, GGDEF domain CEJ46_17530 PF01609 Transposase DDE domain CEJ46_17530 PF13808 DDE_Tnp_1-associated CEJ46_17535 PF00873 AcrB/AcrD/AcrF family CEJ46_17540 PF00529 HlyD membrane-fusion protein of T1SS CEJ46_17540 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEJ46_17550 PF04143 Sulphur transport CEJ46_17565 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEJ46_17565 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CEJ46_17570 PF00072 Response regulator receiver domain CEJ46_17570 PF02954 Bacterial regulatory protein, Fis family CEJ46_17570 PF00158 Sigma-54 interaction domain CEJ46_17575 PF13188 PAS domain CEJ46_17575 PF00563 EAL domain CEJ46_17575 PF00990 Diguanylate cyclase, GGDEF domain CEJ46_17575 PF03707 Bacterial signalling protein N terminal repeat CEJ46_17580 PF00512 His Kinase A (phospho-acceptor) domain CEJ46_17580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ46_17585 PF00989 PAS fold CEJ46_17585 PF00512 His Kinase A (phospho-acceptor) domain CEJ46_17585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ46_17595 PF00072 Response regulator receiver domain CEJ46_17615 PF13358 DDE superfamily endonuclease CEJ46_17630 PF03459 TOBE domain CEJ46_17630 PF00005 ABC transporter CEJ46_17635 PF00528 Binding-protein-dependent transport system inner membrane component CEJ46_17645 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CEJ46_17645 PF07685 CobB/CobQ-like glutamine amidotransferase domain CEJ46_17650 PF04076 Bacterial OB fold (BOF) protein CEJ46_17660 PF08447 PAS fold CEJ46_17660 PF13426 PAS domain CEJ46_17660 PF08448 PAS fold CEJ46_17660 PF05231 MASE1 CEJ46_17660 PF00563 EAL domain CEJ46_17660 PF00990 Diguanylate cyclase, GGDEF domain CEJ46_17665 PF00483 Nucleotidyl transferase CEJ46_17670 PF06483 Chitinase C CEJ46_17670 PF00704 Glycosyl hydrolases family 18 CEJ46_17675 PF12833 Helix-turn-helix domain CEJ46_17675 PF06719 AraC-type transcriptional regulator N-terminus CEJ46_17680 PF00465 Iron-containing alcohol dehydrogenase CEJ46_17710 PF03372 Endonuclease/Exonuclease/phosphatase family CEJ46_17715 PF00512 His Kinase A (phospho-acceptor) domain CEJ46_17715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ46_17715 PF00672 HAMP domain CEJ46_17715 PF00072 Response regulator receiver domain CEJ46_17715 PF01627 Hpt domain CEJ46_17720 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CEJ46_17725 PF02142 MGS-like domain CEJ46_17730 PF00580 UvrD/REP helicase N-terminal domain CEJ46_17730 PF13361 UvrD-like helicase C-terminal domain CEJ46_17730 PF12462 DNA helicase IV / RNA helicase N terminal CEJ46_17735 PF12805 FUSC-like inner membrane protein yccS CEJ46_17755 PF01266 FAD dependent oxidoreductase CEJ46_17755 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CEJ46_17765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ46_17765 PF00512 His Kinase A (phospho-acceptor) domain CEJ46_17765 PF09308 LuxQ, periplasmic CEJ46_17765 PF00072 Response regulator receiver domain CEJ46_17770 PF13407 Periplasmic binding protein domain CEJ46_17780 PF01541 GIY-YIG catalytic domain CEJ46_17785 PF04337 Protein of unknown function, DUF480 CEJ46_17795 PF04363 Protein of unknown function (DUF496) CEJ46_17805 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CEJ46_17805 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CEJ46_17810 PF00230 Major intrinsic protein CEJ46_17815 PF01266 FAD dependent oxidoreductase CEJ46_17815 PF04324 BFD-like [2Fe-2S] binding domain CEJ46_17820 PF00890 FAD binding domain CEJ46_17825 PF13183 4Fe-4S dicluster domain CEJ46_17825 PF02754 Cysteine-rich domain CEJ46_17830 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CEJ46_17830 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CEJ46_17835 PF00085 Thioredoxin CEJ46_17840 PF07690 Major Facilitator Superfamily CEJ46_17845 PF11756 Nitrous oxide-stimulated promoter CEJ46_17855 PF01513 ATP-NAD kinase CEJ46_17860 PF10414 Sirohaem synthase dimerisation region CEJ46_17860 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CEJ46_17860 PF14824 Sirohaem biosynthesis protein central CEJ46_17870 PF13806 Rieske-like [2Fe-2S] domain CEJ46_17875 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEJ46_17875 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CEJ46_17875 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CEJ46_17875 PF04324 BFD-like [2Fe-2S] binding domain CEJ46_17875 PF18267 Rubredoxin NAD+ reductase C-terminal domain CEJ46_17880 PF01610 Transposase CEJ46_17880 PF13542 Helix-turn-helix domain of transposase family ISL3 CEJ46_17880 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CEJ46_17885 PF00857 Isochorismatase family CEJ46_17895 PF13358 DDE superfamily endonuclease CEJ46_17905 PF00892 EamA-like transporter family CEJ46_17925 PF01527 Transposase CEJ46_17930 PF14706 Transposase DNA-binding CEJ46_17930 PF02281 Transposase Tn5 dimerisation domain CEJ46_17930 PF01609 Transposase DDE domain CEJ46_17950 PF05762 VWA domain containing CoxE-like protein CEJ46_17955 PF07728 AAA domain (dynein-related subfamily) CEJ46_17955 PF17868 AAA lid domain CEJ46_17955 PF12592 Protein of unknown function (DUF3763) CEJ46_17965 PF01212 Beta-eliminating lyase CEJ46_17975 PF00270 DEAD/DEAH box helicase CEJ46_17975 PF00271 Helicase conserved C-terminal domain CEJ46_17980 PF03222 Tryptophan/tyrosine permease family CEJ46_17985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ46_17985 PF00672 HAMP domain CEJ46_17990 PF16363 GDP-mannose 4,6 dehydratase CEJ46_17995 PF03746 LamB/YcsF family CEJ46_18005 PF02626 Carboxyltransferase domain, subdomain A and B CEJ46_18020 PF00005 ABC transporter CEJ46_18025 PF13472 GDSL-like Lipase/Acylhydrolase family CEJ46_18030 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase CEJ46_18030 PF07055 Enoyl reductase FAD binding domain CEJ46_18030 PF12241 Trans-2-enoyl-CoA reductase catalytic region CEJ46_18035 PF00990 Diguanylate cyclase, GGDEF domain CEJ46_18035 PF00563 EAL domain CEJ46_18035 PF00498 FHA domain CEJ46_18045 PF01556 DnaJ C terminal domain CEJ46_18045 PF00226 DnaJ domain CEJ46_18045 PF00684 DnaJ central domain CEJ46_18060 PF13419 Haloacid dehalogenase-like hydrolase CEJ46_18065 PF11849 Domain of unknown function (DUF3369) CEJ46_18115 PF00294 pfkB family carbohydrate kinase CEJ46_18120 PF00990 Diguanylate cyclase, GGDEF domain CEJ46_18120 PF03707 Bacterial signalling protein N terminal repeat CEJ46_18120 PF00563 EAL domain CEJ46_18120 PF13188 PAS domain CEJ46_18125 PF00194 Eukaryotic-type carbonic anhydrase CEJ46_18135 PF00672 HAMP domain CEJ46_18135 PF02743 Cache domain CEJ46_18135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ46_18140 PF00491 Arginase family CEJ46_18145 PF17810 Arginine decarboxylase helical bundle domain CEJ46_18145 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CEJ46_18145 PF17944 Arginine decarboxylase C-terminal helical extension CEJ46_18155 PF00005 ABC transporter CEJ46_18155 PF00571 CBS domain CEJ46_18160 PF00528 Binding-protein-dependent transport system inner membrane component CEJ46_18165 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CEJ46_18185 PF00696 Amino acid kinase family CEJ46_18185 PF13840 ACT domain CEJ46_18190 PF06339 Ectoine synthase CEJ46_18195 PF00202 Aminotransferase class-III CEJ46_18200 PF00583 Acetyltransferase (GNAT) family CEJ46_18210 PF01467 Cytidylyltransferase-like CEJ46_18215 PF02540 NAD synthase CEJ46_18245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ46_18245 PF00672 HAMP domain CEJ46_18245 PF02743 Cache domain CEJ46_18250 PF00128 Alpha amylase, catalytic domain CEJ46_18265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ46_18265 PF00672 HAMP domain CEJ46_18265 PF02743 Cache domain CEJ46_18270 PF17863 AAA lid domain CEJ46_18270 PF07726 ATPase family associated with various cellular activities (AAA) CEJ46_18275 PF01882 Protein of unknown function DUF58 CEJ46_18290 PF13519 von Willebrand factor type A domain CEJ46_18305 PF00990 Diguanylate cyclase, GGDEF domain CEJ46_18315 PF01844 HNH endonuclease CEJ46_18320 PF12843 Putative quorum-sensing-regulated virulence factor CEJ46_18325 PF00884 Sulfatase CEJ46_18335 PF01219 Prokaryotic diacylglycerol kinase CEJ46_18340 PF04151 Bacterial pre-peptidase C-terminal domain CEJ46_18340 PF02868 Thermolysin metallopeptidase, alpha-helical domain CEJ46_18340 PF01447 Thermolysin metallopeptidase, catalytic domain CEJ46_18340 PF03413 Peptidase propeptide and YPEB domain CEJ46_18340 PF07504 Fungalysin/Thermolysin Propeptide Motif CEJ46_18350 PF00155 Aminotransferase class I and II CEJ46_18350 PF00392 Bacterial regulatory proteins, gntR family CEJ46_18355 PF03475 3-alpha domain CEJ46_18355 PF03473 MOSC domain CEJ46_18365 PF11647 Membrane Localization Domain CEJ46_18385 PF00107 Zinc-binding dehydrogenase CEJ46_18385 PF08240 Alcohol dehydrogenase GroES-like domain CEJ46_18390 PF00155 Aminotransferase class I and II CEJ46_18395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ46_18395 PF03466 LysR substrate binding domain CEJ46_18400 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CEJ46_18410 PF07690 Major Facilitator Superfamily CEJ46_18415 PF00196 Bacterial regulatory proteins, luxR family CEJ46_18415 PF00072 Response regulator receiver domain CEJ46_18420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ46_18420 PF07730 Histidine kinase CEJ46_18420 PF05231 MASE1 CEJ46_18425 PF07690 Major Facilitator Superfamily CEJ46_18440 PF01966 HD domain CEJ46_18440 PF11871 Domain of unknown function (DUF3391) CEJ46_18445 PF04013 Putative SAM-dependent RNA methyltransferase CEJ46_18460 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CEJ46_18460 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CEJ46_18465 PF01022 Bacterial regulatory protein, arsR family CEJ46_18470 PF01758 Sodium Bile acid symporter family CEJ46_18475 PF01022 Bacterial regulatory protein, arsR family CEJ46_18480 PF00916 Sulfate permease family CEJ46_18480 PF01740 STAS domain CEJ46_18485 PF00582 Universal stress protein family CEJ46_18490 PF17327 Acyl homoserine lactone synthase CEJ46_18495 PF00072 Response regulator receiver domain CEJ46_18495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ46_18505 PF12833 Helix-turn-helix domain CEJ46_18510 PF02311 AraC-like ligand binding domain CEJ46_18510 PF12833 Helix-turn-helix domain CEJ46_18515 PF07715 TonB-dependent Receptor Plug Domain CEJ46_18515 PF00593 TonB dependent receptor CEJ46_18520 PF07690 Major Facilitator Superfamily CEJ46_18525 PF00550 Phosphopantetheine attachment site CEJ46_18525 PF00501 AMP-binding enzyme CEJ46_18525 PF08242 Methyltransferase domain CEJ46_18525 PF00668 Condensation domain CEJ46_18530 PF00501 AMP-binding enzyme CEJ46_18530 PF13193 AMP-binding enzyme C-terminal domain CEJ46_18530 PF00668 Condensation domain CEJ46_18530 PF00550 Phosphopantetheine attachment site CEJ46_18545 PF00425 chorismate binding enzyme CEJ46_18550 PF13193 AMP-binding enzyme C-terminal domain CEJ46_18550 PF00501 AMP-binding enzyme CEJ46_18555 PF00664 ABC transporter transmembrane region CEJ46_18555 PF00005 ABC transporter CEJ46_18560 PF00664 ABC transporter transmembrane region CEJ46_18560 PF00005 ABC transporter CEJ46_18595 PF00970 Oxidoreductase FAD-binding domain CEJ46_18595 PF00175 Oxidoreductase NAD-binding domain CEJ46_18595 PF00111 2Fe-2S iron-sulfur cluster binding domain CEJ46_18600 PF00486 Transcriptional regulatory protein, C terminal CEJ46_18600 PF00072 Response regulator receiver domain CEJ46_18605 PF00512 His Kinase A (phospho-acceptor) domain CEJ46_18605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ46_18610 PF12833 Helix-turn-helix domain CEJ46_18610 PF00072 Response regulator receiver domain CEJ46_18620 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CEJ46_18620 PF01348 Type II intron maturase CEJ46_18625 PF03466 LysR substrate binding domain CEJ46_18625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ46_18630 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CEJ46_18630 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEJ46_18635 PF00528 Binding-protein-dependent transport system inner membrane component CEJ46_18645 PF00005 ABC transporter CEJ46_18650 PF13358 DDE superfamily endonuclease CEJ46_18655 PF02423 Ornithine cyclodeaminase/mu-crystallin family CEJ46_18660 PF14031 Putative serine dehydratase domain CEJ46_18660 PF01168 Alanine racemase, N-terminal domain CEJ46_18665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ46_18665 PF03466 LysR substrate binding domain CEJ46_18690 PF07728 AAA domain (dynein-related subfamily) CEJ46_18690 PF12592 Protein of unknown function (DUF3763) CEJ46_18690 PF17868 AAA lid domain CEJ46_18735 PF02384 N-6 DNA Methylase CEJ46_18735 PF12161 HsdM N-terminal domain CEJ46_18745 PF00158 Sigma-54 interaction domain CEJ46_18745 PF00072 Response regulator receiver domain CEJ46_18745 PF02954 Bacterial regulatory protein, Fis family CEJ46_18800 PF04717 Type VI secretion system, phage-baseplate injector CEJ46_18800 PF16671 Actin cross-linking domain CEJ46_18805 PF05638 Type VI secretion system effector, Hcp CEJ46_18845 PF00478 IMP dehydrogenase / GMP reductase domain CEJ46_18850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEJ46_18850 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CEJ46_18875 PF00313 'Cold-shock' DNA-binding domain CEJ46_18880 PF07152 YaeQ protein CEJ46_18885 PF00042 Globin CEJ46_18885 PF00175 Oxidoreductase NAD-binding domain CEJ46_18885 PF00970 Oxidoreductase FAD-binding domain CEJ46_18890 PF01590 GAF domain CEJ46_18890 PF00158 Sigma-54 interaction domain CEJ46_18905 PF07670 Nucleoside recognition CEJ46_18905 PF07662 Na+ dependent nucleoside transporter C-terminus CEJ46_18905 PF01773 Na+ dependent nucleoside transporter N-terminus CEJ46_18910 PF00111 2Fe-2S iron-sulfur cluster binding domain CEJ46_18910 PF03473 MOSC domain CEJ46_18910 PF03476 MOSC N-terminal beta barrel domain CEJ46_18920 PF05958 tRNA (Uracil-5-)-methyltransferase CEJ46_18925 PF05661 Protein of unknown function (DUF808) CEJ46_18950 PF00990 Diguanylate cyclase, GGDEF domain CEJ46_18950 PF17151 Periplasmic sensor domain CEJ46_18955 PF00455 DeoR C terminal sensor domain CEJ46_18955 PF08220 DeoR-like helix-turn-helix domain CEJ46_18960 PF03472 Autoinducer binding domain CEJ46_18960 PF00196 Bacterial regulatory proteins, luxR family CEJ46_18965 PF00765 Autoinducer synthase CEJ46_18980 PF00528 Binding-protein-dependent transport system inner membrane component CEJ46_18985 PF14785 Maltose transport system permease protein MalF P2 domain CEJ46_18985 PF00528 Binding-protein-dependent transport system inner membrane component CEJ46_18990 PF01547 Bacterial extracellular solute-binding protein CEJ46_19000 PF08402 TOBE domain CEJ46_19000 PF00005 ABC transporter CEJ46_19005 PF00196 Bacterial regulatory proteins, luxR family CEJ46_19015 PF01584 CheW-like domain CEJ46_19015 PF00072 Response regulator receiver domain CEJ46_19020 PF04237 YjbR CEJ46_19025 PF00990 Diguanylate cyclase, GGDEF domain CEJ46_19040 PF00990 Diguanylate cyclase, GGDEF domain CEJ46_19040 PF03707 Bacterial signalling protein N terminal repeat CEJ46_19040 PF00563 EAL domain CEJ46_19055 PF03466 LysR substrate binding domain CEJ46_19055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ46_19060 PF00563 EAL domain CEJ46_19060 PF00990 Diguanylate cyclase, GGDEF domain CEJ46_19070 PF05726 Pirin C-terminal cupin domain CEJ46_19070 PF02678 Pirin CEJ46_19080 PF06865 Pyrimidine/purine nucleoside phosphorylase CEJ46_19090 PF00793 DAHP synthetase I family CEJ46_19095 PF00005 ABC transporter CEJ46_19100 PF00528 Binding-protein-dependent transport system inner membrane component CEJ46_19105 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEJ46_19110 PF00528 Binding-protein-dependent transport system inner membrane component CEJ46_19115 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CEJ46_19115 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CEJ46_19115 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CEJ46_19115 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CEJ46_19130 PF01557 Fumarylacetoacetate (FAA) hydrolase family CEJ46_19140 PF00892 EamA-like transporter family CEJ46_19145 PF00462 Glutaredoxin CEJ46_19160 PF07690 Major Facilitator Superfamily CEJ46_19165 PF03466 LysR substrate binding domain CEJ46_19165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ46_19170 PF08448 PAS fold CEJ46_19170 PF08447 PAS fold CEJ46_19170 PF00563 EAL domain CEJ46_19170 PF00990 Diguanylate cyclase, GGDEF domain CEJ46_19175 PF08525 Opacity-associated protein A N-terminal motif CEJ46_19175 PF01476 LysM domain CEJ46_19175 PF01551 Peptidase family M23 CEJ46_19185 PF01740 STAS domain CEJ46_19185 PF00916 Sulfate permease family CEJ46_19200 PF07694 5TMR of 5TMR-LYT CEJ46_19200 PF00990 Diguanylate cyclase, GGDEF domain CEJ46_19205 PF00005 ABC transporter CEJ46_19210 PF00528 Binding-protein-dependent transport system inner membrane component CEJ46_19215 PF00528 Binding-protein-dependent transport system inner membrane component CEJ46_19220 PF12849 PBP superfamily domain CEJ46_19230 PF00155 Aminotransferase class I and II CEJ46_19230 PF00392 Bacterial regulatory proteins, gntR family CEJ46_19235 PF13302 Acetyltransferase (GNAT) domain CEJ46_19250 PF04151 Bacterial pre-peptidase C-terminal domain CEJ46_19250 PF02868 Thermolysin metallopeptidase, alpha-helical domain CEJ46_19250 PF07504 Fungalysin/Thermolysin Propeptide Motif CEJ46_19250 PF03413 Peptidase propeptide and YPEB domain CEJ46_19250 PF01447 Thermolysin metallopeptidase, catalytic domain CEJ46_19255 PF03922 OmpW family CEJ46_19265 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CEJ46_19265 PF18416 N-acetylglucosamine binding protein domain 2 CEJ46_19270 PF07690 Major Facilitator Superfamily CEJ46_19275 PF03009 Glycerophosphoryl diester phosphodiesterase family CEJ46_19280 PF03466 LysR substrate binding domain CEJ46_19280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ46_19285 PF03306 Alpha-acetolactate decarboxylase CEJ46_19290 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CEJ46_19290 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CEJ46_19290 PF00205 Thiamine pyrophosphate enzyme, central domain CEJ46_19300 PF16326 ABC transporter C-terminal domain CEJ46_19300 PF12848 ABC transporter CEJ46_19300 PF00005 ABC transporter CEJ46_19310 PF12833 Helix-turn-helix domain CEJ46_19315 PF03466 LysR substrate binding domain CEJ46_19315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEJ46_19320 PF02652 L-lactate permease CEJ46_19325 PF01070 FMN-dependent dehydrogenase CEJ46_19340 PF01161 Phosphatidylethanolamine-binding protein CEJ46_19345 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) CEJ46_19355 PF03372 Endonuclease/Exonuclease/phosphatase family CEJ46_19370 PF08447 PAS fold CEJ46_19370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ46_19380 PF01797 Transposase IS200 like CEJ46_19385 PF00356 Bacterial regulatory proteins, lacI family CEJ46_19390 PF01915 Glycosyl hydrolase family 3 C-terminal domain CEJ46_19390 PF00933 Glycosyl hydrolase family 3 N terminal domain CEJ46_19390 PF14310 Fibronectin type III-like domain CEJ46_19395 PF17912 MalK OB fold domain CEJ46_19395 PF00005 ABC transporter CEJ46_19400 PF00528 Binding-protein-dependent transport system inner membrane component CEJ46_19405 PF00528 Binding-protein-dependent transport system inner membrane component CEJ46_19415 PF00356 Bacterial regulatory proteins, lacI family CEJ46_19420 PF02264 LamB porin CEJ46_19425 PF01554 MatE CEJ46_19440 PF07690 Major Facilitator Superfamily CEJ46_19445 PF00672 HAMP domain CEJ46_19445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ46_19450 PF13654 AAA domain CEJ46_19450 PF05362 Lon protease (S16) C-terminal proteolytic domain CEJ46_19460 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CEJ46_19460 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CEJ46_19465 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CEJ46_19470 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CEJ46_19470 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CEJ46_19485 PF00356 Bacterial regulatory proteins, lacI family CEJ46_19490 PF00294 pfkB family carbohydrate kinase CEJ46_19495 PF13407 Periplasmic binding protein domain CEJ46_19500 PF02653 Branched-chain amino acid transport system / permease component CEJ46_19505 PF00005 ABC transporter CEJ46_19510 PF05025 RbsD / FucU transport protein family CEJ46_19530 PF05638 Type VI secretion system effector, Hcp CEJ46_19535 PF00128 Alpha amylase, catalytic domain CEJ46_19535 PF02806 Alpha amylase, C-terminal all-beta domain CEJ46_19535 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CEJ46_19540 PF02446 4-alpha-glucanotransferase CEJ46_19545 PF00343 Carbohydrate phosphorylase CEJ46_19550 PF00196 Bacterial regulatory proteins, luxR family CEJ46_19550 PF17874 MalT-like TPR region CEJ46_19555 PF10928 Protein of unknown function (DUF2810) CEJ46_19560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ46_19560 PF17200 Single Cache domain 2 CEJ46_19560 PF00672 HAMP domain CEJ46_19570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ46_19570 PF02743 Cache domain CEJ46_19570 PF00672 HAMP domain CEJ46_19575 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CEJ46_19585 PF00171 Aldehyde dehydrogenase family CEJ46_19590 PF01037 Lrp/AsnC ligand binding domain CEJ46_19595 PF17200 Single Cache domain 2 CEJ46_19595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ46_19595 PF00672 HAMP domain CEJ46_19605 PF00474 Sodium:solute symporter family CEJ46_19615 PF00171 Aldehyde dehydrogenase family CEJ46_19615 PF01619 Proline dehydrogenase CEJ46_19615 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CEJ46_19615 PF14850 DNA-binding domain of Proline dehydrogenase CEJ46_19620 PF12833 Helix-turn-helix domain CEJ46_19630 PF03781 Sulfatase-modifying factor enzyme 1 CEJ46_19640 PF01243 Pyridoxamine 5'-phosphate oxidase CEJ46_19640 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CEJ46_19645 PF00529 HlyD membrane-fusion protein of T1SS CEJ46_19660 PF00005 ABC transporter CEJ46_19660 PF00664 ABC transporter transmembrane region CEJ46_19660 PF03412 Peptidase C39 family CEJ46_19670 PF00990 Diguanylate cyclase, GGDEF domain CEJ46_19670 PF00072 Response regulator receiver domain CEJ46_19680 PF17200 Single Cache domain 2 CEJ46_19680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ46_19680 PF00672 HAMP domain CEJ46_19685 PF01339 CheB methylesterase CEJ46_19685 PF00072 Response regulator receiver domain CEJ46_19690 PF03975 CheD chemotactic sensory transduction CEJ46_19695 PF03705 CheR methyltransferase, all-alpha domain CEJ46_19695 PF01739 CheR methyltransferase, SAM binding domain CEJ46_19700 PF02203 Tar ligand binding domain homologue CEJ46_19700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEJ46_19700 PF00672 HAMP domain CEJ46_19705 PF01584 CheW-like domain CEJ46_19710 PF01584 CheW-like domain CEJ46_19715 PF02895 Signal transducing histidine kinase, homodimeric domain CEJ46_19715 PF09078 CheY binding CEJ46_19715 PF01627 Hpt domain CEJ46_19715 PF01584 CheW-like domain CEJ46_19715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEJ46_19720 PF00486 Transcriptional regulatory protein, C terminal CEJ46_19720 PF00072 Response regulator receiver domain CEJ46_19730 PF13718 GNAT acetyltransferase 2 CEJ46_19730 PF05127 Helicase CEJ46_19735 PF13416 Bacterial extracellular solute-binding protein CEJ46_19740 PF02195 ParB-like nuclease domain CEJ46_19740 PF08775 ParB family CEJ46_19745 PF18607 ParA helix turn helix domain CEJ46_19745 PF13614 AAA domain