CEJ46_00020	SM01234	CEJ46_00020
CEJ46_00035	SM00382	ATPases associated with a variety of cellular activities
CEJ46_00045	SM00062	Bacterial periplasmic substrate-binding proteins
CEJ46_00050	SM00382	ATPases associated with a variety of cellular activities
CEJ46_00050	SM00760	Bacterial dnaA protein helix-turn-helix domain
CEJ46_00055	SM00480	DNA polymerase III beta subunit
CEJ46_00065	SM00387	Histidine kinase-like ATPases
CEJ46_00065	SM00433	TopoisomeraseII
CEJ46_00125	SM00829	Enoylreductase
CEJ46_00180	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_00180	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_00185	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_00185	SM01358	CEJ46_00185
CEJ46_00200	SM00052	Putative diguanylate phosphodiesterase
CEJ46_00210	SM00999	Aerolysin toxin
CEJ46_00300	SM00257	Lysin motif
CEJ46_00325	SM01001	AIR carboxylase
CEJ46_00390	SM01321	CEJ46_00390
CEJ46_00420	SM01219	CEJ46_00420
CEJ46_00455	SM01144	CEJ46_00455
CEJ46_00480	SM00052	Putative diguanylate phosphodiesterase
CEJ46_00530	SM00382	ATPases associated with a variety of cellular activities
CEJ46_00530	SM00962	SRP54-type protein, GTPase domain
CEJ46_00530	SM00963	SRP54-type protein, helical bundle domain
CEJ46_00535	SM00382	ATPases associated with a variety of cellular activities
CEJ46_00550	SM00450	Rhodanese Homology Domain
CEJ46_00575	SM00563	Phosphate acyltransferases
CEJ46_00610	SM01038	Beta galactosidase small chain
CEJ46_00640	SM00360	RNA recognition motif
CEJ46_00715	SM00052	Putative diguanylate phosphodiesterase
CEJ46_00715	SM00267	diguanylate cyclase
CEJ46_00715	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_00720	SM00382	ATPases associated with a variety of cellular activities
CEJ46_00720	SM00448	cheY-homologous receiver domain
CEJ46_00725	SM00091	PAS domain
CEJ46_00725	SM00387	Histidine kinase-like ATPases
CEJ46_00725	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_00735	SM01230	CEJ46_00735
CEJ46_00775	SM00363	S4 RNA-binding domain
CEJ46_00790	SM00382	ATPases associated with a variety of cellular activities
CEJ46_00870	SM00316	Ribosomal protein S1-like RNA-binding domain
CEJ46_00870	SM00732	Likely ribonuclease with RNase H fold.
CEJ46_00915	SM00448	cheY-homologous receiver domain
CEJ46_00915	SM00862	Transcriptional regulatory protein, C terminal
CEJ46_00920	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_00920	SM00387	Histidine kinase-like ATPases
CEJ46_00920	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_00930	SM00487	DEAD-like helicases superfamily
CEJ46_00930	SM00490	helicase superfamily c-terminal domain
CEJ46_00935	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CEJ46_00935	SM00954	Region found in RelA / SpoT proteins
CEJ46_00940	SM01409	CEJ46_00940
CEJ46_00945	SM00072	Guanylate kinase homologues.
CEJ46_00960	SM00487	DEAD-like helicases superfamily
CEJ46_00960	SM00490	helicase superfamily c-terminal domain
CEJ46_00970	SM00357	Cold shock protein domain
CEJ46_00970	SM00382	ATPases associated with a variety of cellular activities
CEJ46_00970	SM00959	Rho termination factor, N-terminal domain
CEJ46_01030	SM00155	Phospholipase D. Active site motifs.
CEJ46_01085	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CEJ46_01085	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CEJ46_01090	SM00649	Ribosomal protein L11/L12
CEJ46_01115	SM00663	RNA polymerase I subunit A N-terminus
CEJ46_01160	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_01160	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_01180	SM00479	CEJ46_01180
CEJ46_01240	SM00257	Lysin motif
CEJ46_01240	SM00646	CEJ46_01240
CEJ46_01245	SM00853	MutL C terminal dimerisation domain
CEJ46_01245	SM01340	CEJ46_01245
CEJ46_01265	SM00244	prohibitin homologues
CEJ46_01270	SM00244	prohibitin homologues
CEJ46_01285	SM00320	WD40 repeats
CEJ46_01325	SM00838	Elongation factor G C-terminus
CEJ46_01325	SM00889	Elongation factor G, domain IV
CEJ46_01360	SM00382	ATPases associated with a variety of cellular activities
CEJ46_01365	SM01005	Alanine racemase, C-terminal domain
CEJ46_01500	SM01018	B12 binding domain
CEJ46_01525	SM00116	Domain in cystathionine beta-synthase and other proteins.
CEJ46_01525	SM00924	MgtE intracellular N domain
CEJ46_01545	SM00421	helix_turn_helix, Lux Regulon
CEJ46_01555	SM00052	Putative diguanylate phosphodiesterase
CEJ46_01555	SM00267	diguanylate cyclase
CEJ46_01575	SM00965	Secretin and TonB N terminus short domain
CEJ46_01580	SM00382	ATPases associated with a variety of cellular activities
CEJ46_01585	SM00028	Tetratricopeptide repeats
CEJ46_01590	SM00382	ATPases associated with a variety of cellular activities
CEJ46_01660	SM00316	Ribosomal protein S1-like RNA-binding domain
CEJ46_01725	SM00530	Helix-turn-helix XRE-family like proteins 
CEJ46_01735	SM00487	DEAD-like helicases superfamily
CEJ46_01855	SM00650	Ribosomal RNA adenine dimethylases
CEJ46_01875	SM00271	DnaJ molecular chaperone homology domain
CEJ46_01935	SM00478	endonuclease III
CEJ46_01935	SM00525	CEJ46_01935
CEJ46_01975	SM00347	helix_turn_helix multiple antibiotic resistance protein
CEJ46_01990	SM00347	helix_turn_helix multiple antibiotic resistance protein
CEJ46_02025	SM00478	endonuclease III
CEJ46_02040	SM00729	Elongator protein 3, MiaB family, Radical SAM
CEJ46_02055	SM01152	CEJ46_02055
CEJ46_02085	SM00732	Likely ribonuclease with RNase H fold.
CEJ46_02110	SM00731	SprT homologues.
CEJ46_02120	SM00861	Transketolase, pyrimidine binding domain
CEJ46_02135	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CEJ46_02175	SM00091	PAS domain
CEJ46_02175	SM00267	diguanylate cyclase
CEJ46_02185	SM00420	helix_turn_helix, Deoxyribose operon repressor
CEJ46_02185	SM01134	CEJ46_02185
CEJ46_02200	SM00530	Helix-turn-helix XRE-family like proteins 
CEJ46_02210	SM00487	DEAD-like helicases superfamily
CEJ46_02270	SM00387	Histidine kinase-like ATPases
CEJ46_02280	SM00563	Phosphate acyltransferases
CEJ46_02320	SM00886	Stress responsive A/B Barrel Domain
CEJ46_02400	SM00028	Tetratricopeptide repeats
CEJ46_02410	SM00671	Sel1-like repeats.
CEJ46_02460	SM00487	DEAD-like helicases superfamily
CEJ46_02460	SM00490	helicase superfamily c-terminal domain
CEJ46_02500	SM00400	zinc finger
CEJ46_02500	SM00493	CEJ46_02500
CEJ46_02500	SM00766	DNA primase DnaG DnaB-binding
CEJ46_02525	SM01207	CEJ46_02525
CEJ46_02530	SM00905	Dihydroneopterin aldolase
CEJ46_02575	SM00257	Lysin motif
CEJ46_02585	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CEJ46_02585	SM00534	ATPase domain of DNA mismatch repair MUTS family
CEJ46_02610	SM00382	ATPases associated with a variety of cellular activities
CEJ46_02620	SM00382	ATPases associated with a variety of cellular activities
CEJ46_02630	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CEJ46_02700	SM00829	Enoylreductase
CEJ46_02725	SM01091	Transporter associated domain
CEJ46_02735	SM00382	ATPases associated with a variety of cellular activities
CEJ46_02735	SM00962	SRP54-type protein, GTPase domain
CEJ46_02735	SM00963	SRP54-type protein, helical bundle domain
CEJ46_02800	SM00644	CEJ46_02800
CEJ46_02825	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CEJ46_02825	SM00895	CEJ46_02825
CEJ46_02855	SM00947	Carbonic anhydrase
CEJ46_02865	SM00382	ATPases associated with a variety of cellular activities
CEJ46_02920	SM00487	DEAD-like helicases superfamily
CEJ46_02920	SM00490	helicase superfamily c-terminal domain
CEJ46_02920	SM00847	Helicase associated domain (HA2)  Add an annotation
CEJ46_02960	SM00938	Nitrogen regulatory protein P-II
CEJ46_02980	SM00382	ATPases associated with a variety of cellular activities
CEJ46_02990	SM01068	Putative carbohydrate binding domain
CEJ46_03010	SM00382	ATPases associated with a variety of cellular activities
CEJ46_03015	SM00382	ATPases associated with a variety of cellular activities
CEJ46_03035	SM00091	PAS domain
CEJ46_03035	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_03035	SM00387	Histidine kinase-like ATPases
CEJ46_03035	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_03035	SM00448	cheY-homologous receiver domain
CEJ46_03105	SM01103	CEJ46_03105
CEJ46_03115	SM00382	ATPases associated with a variety of cellular activities
CEJ46_03150	SM00316	Ribosomal protein S1-like RNA-binding domain
CEJ46_03150	SM00322	K homology RNA-binding domain
CEJ46_03170	SM01387	CEJ46_03170
CEJ46_03175	SM00316	Ribosomal protein S1-like RNA-binding domain
CEJ46_03175	SM00322	K homology RNA-binding domain
CEJ46_03180	SM00028	Tetratricopeptide repeats
CEJ46_03185	SM00347	helix_turn_helix multiple antibiotic resistance protein
CEJ46_03205	SM00052	Putative diguanylate phosphodiesterase
CEJ46_03205	SM00091	PAS domain
CEJ46_03205	SM00267	diguanylate cyclase
CEJ46_03230	SM00052	Putative diguanylate phosphodiesterase
CEJ46_03230	SM00267	diguanylate cyclase
CEJ46_03240	SM00487	DEAD-like helicases superfamily
CEJ46_03240	SM00490	helicase superfamily c-terminal domain
CEJ46_03265	SM00382	ATPases associated with a variety of cellular activities
CEJ46_03280	SM00927	DNA mismatch repair enzyme MutH
CEJ46_03290	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CEJ46_03320	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CEJ46_03335	SM00904	Riboflavin kinase
CEJ46_03385	SM00448	cheY-homologous receiver domain
CEJ46_03385	SM00850	LytTr DNA-binding domain
CEJ46_03400	SM00830	Chorismate mutase type II
CEJ46_03410	SM00382	ATPases associated with a variety of cellular activities
CEJ46_03430	SM00052	Putative diguanylate phosphodiesterase
CEJ46_03430	SM00267	diguanylate cyclase
CEJ46_03440	SM00830	Chorismate mutase type II
CEJ46_03455	SM00363	S4 RNA-binding domain
CEJ46_03465	SM00382	ATPases associated with a variety of cellular activities
CEJ46_03465	SM01086	C-terminal, D2-small domain, of ClpB protein
CEJ46_03525	SM00448	cheY-homologous receiver domain
CEJ46_03525	SM00862	Transcriptional regulatory protein, C terminal
CEJ46_03530	SM00091	PAS domain
CEJ46_03530	SM00387	Histidine kinase-like ATPases
CEJ46_03530	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_03560	SM00382	ATPases associated with a variety of cellular activities
CEJ46_03595	SM00116	Domain in cystathionine beta-synthase and other proteins.
CEJ46_03610	SM01323	CEJ46_03610
CEJ46_03655	SM00271	DnaJ molecular chaperone homology domain
CEJ46_03680	SM00562	CEJ46_03680
CEJ46_03710	SM00564	beta-propeller repeat
CEJ46_03715	SM00382	ATPases associated with a variety of cellular activities
CEJ46_03730	SM00116	Domain in cystathionine beta-synthase and other proteins.
CEJ46_03730	SM01240	CEJ46_03730
CEJ46_03770	SM00495	Chitin-binding domain type 3
CEJ46_03935	SM00347	helix_turn_helix multiple antibiotic resistance protein
CEJ46_03950	SM00862	Transcriptional regulatory protein, C terminal
CEJ46_04060	SM00420	helix_turn_helix, Deoxyribose operon repressor
CEJ46_04060	SM01134	CEJ46_04060
CEJ46_04065	SM00420	helix_turn_helix, Deoxyribose operon repressor
CEJ46_04065	SM01134	CEJ46_04065
CEJ46_04200	SM00271	DnaJ molecular chaperone homology domain
CEJ46_04240	SM00829	Enoylreductase
CEJ46_04255	SM00062	Bacterial periplasmic substrate-binding proteins
CEJ46_04265	SM01211	CEJ46_04265
CEJ46_04345	SM00861	Transketolase, pyrimidine binding domain
CEJ46_04370	SM00981	CEJ46_04370
CEJ46_04390	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CEJ46_04390	SM00475	5'-3' exonuclease
CEJ46_04400	SM00267	diguanylate cyclase
CEJ46_04405	SM00028	Tetratricopeptide repeats
CEJ46_04435	SM00382	ATPases associated with a variety of cellular activities
CEJ46_04435	SM00930	CEJ46_04435
CEJ46_04450	SM00354	helix_turn _helix lactose operon repressor
CEJ46_04460	SM00642	Alpha-amylase domain
CEJ46_04465	SM00448	cheY-homologous receiver domain
CEJ46_04465	SM00862	Transcriptional regulatory protein, C terminal
CEJ46_04470	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_04470	SM00387	Histidine kinase-like ATPases
CEJ46_04470	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_04520	SM01321	CEJ46_04520
CEJ46_04530	SM00226	Low molecular weight phosphatase family
CEJ46_04540	SM00984	UDP binding domain
CEJ46_04545	SM00984	UDP binding domain
CEJ46_04655	SM00729	Elongator protein 3, MiaB family, Radical SAM
CEJ46_04670	SM00936	Penicillin-binding protein 5, C-terminal domain 
CEJ46_04725	SM00116	Domain in cystathionine beta-synthase and other proteins.
CEJ46_04725	SM01091	Transporter associated domain
CEJ46_04740	SM00729	Elongator protein 3, MiaB family, Radical SAM
CEJ46_04775	SM00771	ZipA, C-terminal domain (FtsZ-binding)
CEJ46_04780	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CEJ46_04780	SM00292	breast cancer carboxy-terminal domain
CEJ46_04780	SM00532	Ligase N family
CEJ46_04795	SM00422	helix_turn_helix, mercury resistance
CEJ46_04805	SM00244	prohibitin homologues
CEJ46_04840	SM00862	Transcriptional regulatory protein, C terminal
CEJ46_04845	SM00387	Histidine kinase-like ATPases
CEJ46_04865	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CEJ46_04940	SM00479	CEJ46_04940
CEJ46_05015	SM00478	endonuclease III
CEJ46_05015	SM00525	CEJ46_05015
CEJ46_05025	SM00900	CEJ46_05025
CEJ46_05065	SM00923	MbtH-like protein
CEJ46_05070	SM00823	Phosphopantetheine attachment site
CEJ46_05070	SM00824	Thioesterase
CEJ46_05140	SM00487	DEAD-like helicases superfamily
CEJ46_05140	SM00490	helicase superfamily c-terminal domain
CEJ46_05145	SM00382	ATPases associated with a variety of cellular activities
CEJ46_05145	SM00448	cheY-homologous receiver domain
CEJ46_05160	SM00729	Elongator protein 3, MiaB family, Radical SAM
CEJ46_05165	SM00852	Probable molybdopterin binding domain
CEJ46_05185	SM00267	diguanylate cyclase
CEJ46_05190	SM00116	Domain in cystathionine beta-synthase and other proteins.
CEJ46_05280	SM00448	cheY-homologous receiver domain
CEJ46_05300	SM00382	ATPases associated with a variety of cellular activities
CEJ46_05310	SM00493	CEJ46_05310
CEJ46_05345	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CEJ46_05365	SM00870	CEJ46_05365
CEJ46_05390	SM00487	DEAD-like helicases superfamily
CEJ46_05390	SM00491	CEJ46_05390
CEJ46_05420	SM00474	3'-5' exonuclease
CEJ46_05460	SM00495	Chitin-binding domain type 3
CEJ46_05460	SM00636	CEJ46_05460
CEJ46_05500	SM00642	Alpha-amylase domain
CEJ46_05505	SM00487	DEAD-like helicases superfamily
CEJ46_05505	SM00490	helicase superfamily c-terminal domain
CEJ46_05530	SM00448	cheY-homologous receiver domain
CEJ46_05530	SM00862	Transcriptional regulatory protein, C terminal
CEJ46_05535	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_05535	SM00387	Histidine kinase-like ATPases
CEJ46_05565	SM00382	ATPases associated with a variety of cellular activities
CEJ46_05565	SM00448	cheY-homologous receiver domain
CEJ46_05570	SM00387	Histidine kinase-like ATPases
CEJ46_05570	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_05590	SM00382	ATPases associated with a variety of cellular activities
CEJ46_05590	SM00994	ClpX C4-type zinc finger
CEJ46_05590	SM01086	C-terminal, D2-small domain, of ClpB protein
CEJ46_05595	SM00382	ATPases associated with a variety of cellular activities
CEJ46_05595	SM00464	Found in ATP-dependent protease La (LON)
CEJ46_05600	SM00411	bacterial (prokaryotic) histone like domain
CEJ46_05620	SM00316	Ribosomal protein S1-like RNA-binding domain
CEJ46_05625	SM00411	bacterial (prokaryotic) histone like domain
CEJ46_05635	SM00028	Tetratricopeptide repeats
CEJ46_05640	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CEJ46_05660	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CEJ46_05660	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CEJ46_05665	SM00344	helix_turn_helix ASNC type
CEJ46_05670	SM00843	CEJ46_05670
CEJ46_05725	SM00729	Elongator protein 3, MiaB family, Radical SAM
CEJ46_05730	SM00020	Trypsin-like serine protease
CEJ46_05735	SM00052	Putative diguanylate phosphodiesterase
CEJ46_05735	SM00091	PAS domain
CEJ46_05830	SM00481	DNA polymerase alpha chain like domain
CEJ46_05840	SM00363	S4 RNA-binding domain
CEJ46_05845	SM00052	Putative diguanylate phosphodiesterase
CEJ46_05845	SM00267	diguanylate cyclase
CEJ46_05850	SM00382	ATPases associated with a variety of cellular activities
CEJ46_05855	SM00382	ATPases associated with a variety of cellular activities
CEJ46_05865	SM00267	diguanylate cyclase
CEJ46_05890	SM00919	Malic enzyme, NAD binding domain
CEJ46_05890	SM01274	CEJ46_05890
CEJ46_05955	SM00448	cheY-homologous receiver domain
CEJ46_05960	SM00387	Histidine kinase-like ATPases
CEJ46_06000	SM00528	Domain in histone-like proteins of HNS family
CEJ46_06060	SM00357	Cold shock protein domain
CEJ46_06070	SM00382	ATPases associated with a variety of cellular activities
CEJ46_06070	SM01086	C-terminal, D2-small domain, of ClpB protein
CEJ46_06075	SM00316	Ribosomal protein S1-like RNA-binding domain
CEJ46_06100	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CEJ46_06100	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CEJ46_06100	SM00493	CEJ46_06100
CEJ46_06135	SM00354	helix_turn _helix lactose operon repressor
CEJ46_06145	SM00448	cheY-homologous receiver domain
CEJ46_06145	SM00862	Transcriptional regulatory protein, C terminal
CEJ46_06270	SM01131	CEJ46_06270
CEJ46_06285	SM00382	ATPases associated with a variety of cellular activities
CEJ46_06290	SM00382	ATPases associated with a variety of cellular activities
CEJ46_06295	SM00382	ATPases associated with a variety of cellular activities
CEJ46_06315	SM00382	ATPases associated with a variety of cellular activities
CEJ46_06345	SM00155	Phospholipase D. Active site motifs.
CEJ46_06365	SM00052	Putative diguanylate phosphodiesterase
CEJ46_06375	SM00382	ATPases associated with a variety of cellular activities
CEJ46_06415	SM00487	DEAD-like helicases superfamily
CEJ46_06415	SM00490	helicase superfamily c-terminal domain
CEJ46_06435	SM00387	Histidine kinase-like ATPases
CEJ46_06440	SM00448	cheY-homologous receiver domain
CEJ46_06440	SM00862	Transcriptional regulatory protein, C terminal
CEJ46_06450	SM00487	DEAD-like helicases superfamily
CEJ46_06450	SM00490	helicase superfamily c-terminal domain
CEJ46_06455	SM00363	S4 RNA-binding domain
CEJ46_06480	SM00382	ATPases associated with a variety of cellular activities
CEJ46_06525	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_06525	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_06525	SM01049	CEJ46_06525
CEJ46_06540	SM00852	Probable molybdopterin binding domain
CEJ46_06570	SM00434	DNA Topoisomerase IV
CEJ46_06575	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_06595	SM00342	helix_turn_helix, arabinose operon control protein
CEJ46_06635	SM00382	ATPases associated with a variety of cellular activities
CEJ46_06660	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_06660	SM00387	Histidine kinase-like ATPases
CEJ46_06660	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_06665	SM00448	cheY-homologous receiver domain
CEJ46_06665	SM00862	Transcriptional regulatory protein, C terminal
CEJ46_06690	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CEJ46_06690	SM00895	CEJ46_06690
CEJ46_06760	SM00327	von Willebrand factor (vWF) type A domain
CEJ46_06765	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CEJ46_06785	SM00382	ATPases associated with a variety of cellular activities
CEJ46_06800	SM00062	Bacterial periplasmic substrate-binding proteins
CEJ46_06810	SM00028	Tetratricopeptide repeats
CEJ46_06810	SM00267	diguanylate cyclase
CEJ46_06840	SM00316	Ribosomal protein S1-like RNA-binding domain
CEJ46_06850	SM01321	CEJ46_06850
CEJ46_06870	SM00382	ATPases associated with a variety of cellular activities
CEJ46_06880	SM00945	ProQ/FINO family
CEJ46_06885	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CEJ46_06885	SM00245	tail specific protease
CEJ46_06920	SM00981	CEJ46_06920
CEJ46_06930	SM00382	ATPases associated with a variety of cellular activities
CEJ46_07015	SM00100	Cyclic nucleotide-monophosphate binding domain
CEJ46_07015	SM00419	helix_turn_helix, cAMP Regulatory protein
CEJ46_07045	SM00382	ATPases associated with a variety of cellular activities
CEJ46_07080	SM00382	ATPases associated with a variety of cellular activities
CEJ46_07085	SM00421	helix_turn_helix, Lux Regulon
CEJ46_07085	SM00448	cheY-homologous receiver domain
CEJ46_07090	SM00387	Histidine kinase-like ATPases
CEJ46_07110	SM00382	ATPases associated with a variety of cellular activities
CEJ46_07135	SM01144	CEJ46_07135
CEJ46_07145	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_07215	SM00849	Metallo-beta-lactamase superfamily
CEJ46_07300	SM00382	ATPases associated with a variety of cellular activities
CEJ46_07300	SM00487	DEAD-like helicases superfamily
CEJ46_07300	SM00490	helicase superfamily c-terminal domain
CEJ46_07300	SM00847	Helicase associated domain (HA2)  Add an annotation
CEJ46_07315	SM00479	CEJ46_07315
CEJ46_07320	SM00267	diguanylate cyclase
CEJ46_07320	SM01079	CEJ46_07320
CEJ46_07365	SM00354	helix_turn _helix lactose operon repressor
CEJ46_07375	SM00487	DEAD-like helicases superfamily
CEJ46_07375	SM00490	helicase superfamily c-terminal domain
CEJ46_07390	SM00357	Cold shock protein domain
CEJ46_07400	SM00448	cheY-homologous receiver domain
CEJ46_07405	SM00387	Histidine kinase-like ATPases
CEJ46_07415	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_07415	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_07420	SM01005	Alanine racemase, C-terminal domain
CEJ46_07430	SM00267	diguanylate cyclase
CEJ46_07445	SM00091	PAS domain
CEJ46_07445	SM00382	ATPases associated with a variety of cellular activities
CEJ46_07505	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_07505	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_07520	SM00448	cheY-homologous receiver domain
CEJ46_07530	SM00138	Methyltransferase, chemotaxis proteins 
CEJ46_07535	SM00260	Two component signalling adaptor domain
CEJ46_07540	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_07540	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_07545	SM00073	Histidine Phosphotransfer domain
CEJ46_07545	SM00260	Two component signalling adaptor domain
CEJ46_07545	SM00387	Histidine kinase-like ATPases
CEJ46_07545	SM01231	CEJ46_07545
CEJ46_07555	SM00448	cheY-homologous receiver domain
CEJ46_07560	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_07565	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CEJ46_07575	SM00100	Cyclic nucleotide-monophosphate binding domain
CEJ46_07575	SM00116	Domain in cystathionine beta-synthase and other proteins.
CEJ46_07580	SM00479	CEJ46_07580
CEJ46_07585	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_07585	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_07595	SM00347	helix_turn_helix multiple antibiotic resistance protein
CEJ46_07610	SM00849	Metallo-beta-lactamase superfamily
CEJ46_07695	SM00382	ATPases associated with a variety of cellular activities
CEJ46_07700	SM00450	Rhodanese Homology Domain
CEJ46_07705	SM00062	Bacterial periplasmic substrate-binding proteins
CEJ46_07710	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_07710	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_07720	SM00640	Glycosyl hydrolases family 32
CEJ46_07725	SM00354	helix_turn _helix lactose operon repressor
CEJ46_07740	SM00052	Putative diguanylate phosphodiesterase
CEJ46_07750	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_07750	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_07880	SM00342	helix_turn_helix, arabinose operon control protein
CEJ46_07890	SM00862	Transcriptional regulatory protein, C terminal
CEJ46_07960	SM00220	Serine/Threonine protein kinases, catalytic domain
CEJ46_07985	SM00240	Forkhead associated domain
CEJ46_08010	SM00382	ATPases associated with a variety of cellular activities
CEJ46_08010	SM01086	C-terminal, D2-small domain, of ClpB protein
CEJ46_08095	SM00530	Helix-turn-helix XRE-family like proteins 
CEJ46_08110	SM00267	diguanylate cyclase
CEJ46_08120	SM00642	Alpha-amylase domain
CEJ46_08130	SM00260	Two component signalling adaptor domain
CEJ46_08130	SM00448	cheY-homologous receiver domain
CEJ46_08135	SM00062	Bacterial periplasmic substrate-binding proteins
CEJ46_08140	SM00448	cheY-homologous receiver domain
CEJ46_08145	SM00387	Histidine kinase-like ATPases
CEJ46_08185	SM00028	Tetratricopeptide repeats
CEJ46_08185	SM00386	HAT (Half-A-TPR) repeats
CEJ46_08230	SM00382	ATPases associated with a variety of cellular activities
CEJ46_08245	SM00855	Phosphoglycerate mutase family
CEJ46_08280	SM00382	ATPases associated with a variety of cellular activities
CEJ46_08290	SM00382	ATPases associated with a variety of cellular activities
CEJ46_08295	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_08295	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_08310	SM00479	CEJ46_08310
CEJ46_08330	SM00052	Putative diguanylate phosphodiesterase
CEJ46_08330	SM00267	diguanylate cyclase
CEJ46_08340	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CEJ46_08340	SM00091	PAS domain
CEJ46_08340	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_08355	SM00411	bacterial (prokaryotic) histone like domain
CEJ46_08360	SM00873	B3/4 domain
CEJ46_08360	SM00874	tRNA synthetase B5 domain
CEJ46_08360	SM00896	Ferredoxin-fold anticodon binding domain
CEJ46_08405	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CEJ46_08405	SM00465	GIY-YIG type nucleases (URI domain)
CEJ46_08410	SM00421	helix_turn_helix, Lux Regulon
CEJ46_08410	SM00448	cheY-homologous receiver domain
CEJ46_08415	SM00486	DNA polymerase type-B family
CEJ46_08425	SM00841	Elongation factor P, C-terminal
CEJ46_08425	SM01185	CEJ46_08425
CEJ46_08435	SM01022	CEJ46_08435
CEJ46_08440	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CEJ46_08440	SM00866	CEJ46_08440
CEJ46_08490	SM00671	Sel1-like repeats.
CEJ46_08545	SM00267	diguanylate cyclase
CEJ46_08565	SM00387	Histidine kinase-like ATPases
CEJ46_08565	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_08565	SM00448	cheY-homologous receiver domain
CEJ46_08580	SM00028	Tetratricopeptide repeats
CEJ46_08635	SM00382	ATPases associated with a variety of cellular activities
CEJ46_08640	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CEJ46_08650	SM00840	CEJ46_08650
CEJ46_08665	SM00052	Putative diguanylate phosphodiesterase
CEJ46_08685	SM00491	CEJ46_08685
CEJ46_08705	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_08705	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_08725	SM00062	Bacterial periplasmic substrate-binding proteins
CEJ46_08725	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CEJ46_08730	SM00382	ATPases associated with a variety of cellular activities
CEJ46_08755	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_08755	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_08785	SM00763	PrkA AAA domain
CEJ46_08815	SM00382	ATPases associated with a variety of cellular activities
CEJ46_08820	SM00849	Metallo-beta-lactamase superfamily
CEJ46_08835	SM00382	ATPases associated with a variety of cellular activities
CEJ46_08850	SM00487	DEAD-like helicases superfamily
CEJ46_08850	SM00490	helicase superfamily c-terminal domain
CEJ46_08850	SM00982	CEJ46_08850
CEJ46_08850	SM01058	CarD-like/TRCF domain
CEJ46_08900	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_08900	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_08910	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CEJ46_08940	SM00729	Elongator protein 3, MiaB family, Radical SAM
CEJ46_08940	SM00876	Biotin and Thiamin Synthesis associated domain
CEJ46_08955	SM00382	ATPases associated with a variety of cellular activities
CEJ46_08975	SM00382	ATPases associated with a variety of cellular activities
CEJ46_09010	SM00382	ATPases associated with a variety of cellular activities
CEJ46_09015	SM00382	ATPases associated with a variety of cellular activities
CEJ46_09035	SM00052	Putative diguanylate phosphodiesterase
CEJ46_09035	SM00421	helix_turn_helix, Lux Regulon
CEJ46_09035	SM00448	cheY-homologous receiver domain
CEJ46_09060	SM00563	Phosphate acyltransferases
CEJ46_09120	SM00825	Beta-ketoacyl synthase
CEJ46_09130	SM00822	CEJ46_09130
CEJ46_09135	SM00825	Beta-ketoacyl synthase
CEJ46_09155	SM00267	diguanylate cyclase
CEJ46_09185	SM00354	helix_turn _helix lactose operon repressor
CEJ46_09200	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_09200	SM00387	Histidine kinase-like ATPases
CEJ46_09200	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_09205	SM00448	cheY-homologous receiver domain
CEJ46_09205	SM00862	Transcriptional regulatory protein, C terminal
CEJ46_09220	SM00344	helix_turn_helix ASNC type
CEJ46_09230	SM00387	Histidine kinase-like ATPases
CEJ46_09230	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_09235	SM00448	cheY-homologous receiver domain
CEJ46_09235	SM00862	Transcriptional regulatory protein, C terminal
CEJ46_09250	SM01236	CEJ46_09250
CEJ46_09295	SM00857	Resolvase, N terminal domain
CEJ46_09300	SM00530	Helix-turn-helix XRE-family like proteins 
CEJ46_09345	SM00062	Bacterial periplasmic substrate-binding proteins
CEJ46_09345	SM00267	diguanylate cyclase
CEJ46_09370	SM00344	helix_turn_helix ASNC type
CEJ46_09380	SM00978	CEJ46_09380
CEJ46_09390	SM00563	Phosphate acyltransferases
CEJ46_09410	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CEJ46_09445	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CEJ46_09450	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CEJ46_09455	SM01144	CEJ46_09455
CEJ46_09475	SM00260	Two component signalling adaptor domain
CEJ46_09475	SM00448	cheY-homologous receiver domain
CEJ46_09540	SM00825	Beta-ketoacyl synthase
CEJ46_09550	SM00822	CEJ46_09550
CEJ46_09555	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CEJ46_09585	SM00363	S4 RNA-binding domain
CEJ46_09590	SM00316	Ribosomal protein S1-like RNA-binding domain
CEJ46_09610	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CEJ46_09670	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CEJ46_09670	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CEJ46_09670	SM00493	CEJ46_09670
CEJ46_09740	SM00382	ATPases associated with a variety of cellular activities
CEJ46_09750	SM00260	Two component signalling adaptor domain
CEJ46_09755	SM00260	Two component signalling adaptor domain
CEJ46_09765	SM00448	cheY-homologous receiver domain
CEJ46_09770	SM00073	Histidine Phosphotransfer domain
CEJ46_09770	SM00260	Two component signalling adaptor domain
CEJ46_09770	SM00387	Histidine kinase-like ATPases
CEJ46_09770	SM01231	CEJ46_09770
CEJ46_09780	SM00448	cheY-homologous receiver domain
CEJ46_09795	SM00382	ATPases associated with a variety of cellular activities
CEJ46_09795	SM00962	SRP54-type protein, GTPase domain
CEJ46_09805	SM00855	Phosphoglycerate mutase family
CEJ46_09820	SM00836	DALR anticodon binding domain
CEJ46_09820	SM01016	Arginyl tRNA synthetase N terminal dom
CEJ46_09840	SM00899	CEJ46_09840
CEJ46_09845	SM00342	helix_turn_helix, arabinose operon control protein
CEJ46_09855	SM00382	ATPases associated with a variety of cellular activities
CEJ46_09865	SM00881	CoA binding domain
CEJ46_09880	SM00861	Transketolase, pyrimidine binding domain
CEJ46_09970	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CEJ46_09980	SM00825	Beta-ketoacyl synthase
CEJ46_10020	SM00463	Small MutS-related domain
CEJ46_10075	SM00382	ATPases associated with a variety of cellular activities
CEJ46_10100	SM00382	ATPases associated with a variety of cellular activities
CEJ46_10100	SM00448	cheY-homologous receiver domain
CEJ46_10105	SM00091	PAS domain
CEJ46_10105	SM00387	Histidine kinase-like ATPases
CEJ46_10105	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_10110	SM00382	ATPases associated with a variety of cellular activities
CEJ46_10200	SM01130	CEJ46_10200
CEJ46_10230	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_10230	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_10305	SM00937	CEJ46_10305
CEJ46_10325	SM01400	CEJ46_10325
CEJ46_10445	SM00047	Lysozyme subfamily 2
CEJ46_10490	SM00138	Methyltransferase, chemotaxis proteins 
CEJ46_10495	SM00260	Two component signalling adaptor domain
CEJ46_10495	SM00448	cheY-homologous receiver domain
CEJ46_10500	SM00858	CEJ46_10500
CEJ46_10650	SM01081	Putative carbohydrate binding domain
CEJ46_10670	SM00363	S4 RNA-binding domain
CEJ46_10710	SM00479	CEJ46_10710
CEJ46_10725	SM00849	Metallo-beta-lactamase superfamily
CEJ46_10730	SM00257	Lysin motif
CEJ46_10745	SM00938	Nitrogen regulatory protein P-II
CEJ46_10755	SM00977	TilS substrate C-terminal domain
CEJ46_10765	SM00481	DNA polymerase alpha chain like domain
CEJ46_10795	SM00935	Outer membrane protein (OmpH-like)
CEJ46_10805	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CEJ46_10850	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CEJ46_10905	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CEJ46_10955	SM00267	diguanylate cyclase
CEJ46_11000	SM00900	CEJ46_11000
CEJ46_11050	SM00464	Found in ATP-dependent protease La (LON)
CEJ46_11085	SM00925	MltA specific insert domain
CEJ46_11105	SM00382	ATPases associated with a variety of cellular activities
CEJ46_11165	SM00354	helix_turn _helix lactose operon repressor
CEJ46_11210	SM00838	Elongation factor G C-terminus
CEJ46_11210	SM00889	Elongation factor G, domain IV
CEJ46_11215	SM00382	ATPases associated with a variety of cellular activities
CEJ46_11245	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
CEJ46_11250	SM01133	CEJ46_11250
CEJ46_11285	SM00986	Uracil DNA glycosylase superfamily
CEJ46_11285	SM00987	UreE urease accessory protein, C-terminal domain 
CEJ46_11290	SM00518	AP endonuclease family 2
CEJ46_11325	SM00448	cheY-homologous receiver domain
CEJ46_11325	SM00862	Transcriptional regulatory protein, C terminal
CEJ46_11335	SM00073	Histidine Phosphotransfer domain
CEJ46_11335	SM00091	PAS domain
CEJ46_11335	SM00387	Histidine kinase-like ATPases
CEJ46_11335	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_11335	SM00448	cheY-homologous receiver domain
CEJ46_11340	SM00729	Elongator protein 3, MiaB family, Radical SAM
CEJ46_11400	SM00851	MGS-like domain
CEJ46_11400	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CEJ46_11405	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CEJ46_11420	SM00957	SecA DEAD-like domain
CEJ46_11420	SM00958	SecA preprotein cross-linking domain
CEJ46_11435	SM00864	Tubulin/FtsZ family, GTPase domain
CEJ46_11435	SM00865	Tubulin/FtsZ family, C-terminal domain
CEJ46_11440	SM00842	Cell division protein FtsA
CEJ46_11525	SM00749	bacterial OsmY and nodulation domain
CEJ46_11580	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CEJ46_11585	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CEJ46_11590	SM00434	DNA Topoisomerase IV
CEJ46_11595	SM00387	Histidine kinase-like ATPases
CEJ46_11595	SM00433	TopoisomeraseII
CEJ46_11635	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_11645	SM00880	CEJ46_11645
CEJ46_11645	SM01118	CEJ46_11645
CEJ46_11660	SM00287	Bacterial SH3 domain homologues
CEJ46_11670	SM00382	ATPases associated with a variety of cellular activities
CEJ46_11680	SM01192	CEJ46_11680
CEJ46_11680	SM01193	CEJ46_11680
CEJ46_11695	SM00954	Region found in RelA / SpoT proteins
CEJ46_11705	SM00073	Histidine Phosphotransfer domain
CEJ46_11705	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_11705	SM00387	Histidine kinase-like ATPases
CEJ46_11705	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_11705	SM00448	cheY-homologous receiver domain
CEJ46_11730	SM00358	Double-stranded RNA binding motif
CEJ46_11730	SM00535	Ribonuclease III family
CEJ46_11860	SM00014	Acid phosphatase homologues
CEJ46_11865	SM00917	LeuA allosteric (dimerisation) domain
CEJ46_11870	SM01329	CEJ46_11870
CEJ46_11930	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CEJ46_11985	SM00487	DEAD-like helicases superfamily
CEJ46_11985	SM00490	helicase superfamily c-terminal domain
CEJ46_11995	SM00670	Large family of predicted nucleotide-binding domains
CEJ46_12020	SM00989	CEJ46_12020
CEJ46_12025	SM00387	Histidine kinase-like ATPases
CEJ46_12030	SM00563	Phosphate acyltransferases
CEJ46_12065	SM00382	ATPases associated with a variety of cellular activities
CEJ46_12075	SM00116	Domain in cystathionine beta-synthase and other proteins.
CEJ46_12095	SM00382	ATPases associated with a variety of cellular activities
CEJ46_12125	SM00116	Domain in cystathionine beta-synthase and other proteins.
CEJ46_12125	SM00924	MgtE intracellular N domain
CEJ46_12140	SM00382	ATPases associated with a variety of cellular activities
CEJ46_12215	SM00382	ATPases associated with a variety of cellular activities
CEJ46_12290	SM00563	Phosphate acyltransferases
CEJ46_12295	SM00487	DEAD-like helicases superfamily
CEJ46_12295	SM00490	helicase superfamily c-terminal domain
CEJ46_12320	SM00662	RNA polymerases D
CEJ46_12325	SM00363	S4 RNA-binding domain
CEJ46_12325	SM01390	CEJ46_12325
CEJ46_12390	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CEJ46_12395	SM01374	CEJ46_12395
CEJ46_12415	SM00322	K homology RNA-binding domain
CEJ46_12430	SM01382	CEJ46_12430
CEJ46_12430	SM01383	CEJ46_12430
CEJ46_12450	SM01403	CEJ46_12450
CEJ46_12455	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CEJ46_12460	SM00316	Ribosomal protein S1-like RNA-binding domain
CEJ46_12460	SM00357	Cold shock protein domain
CEJ46_12460	SM00955	CEJ46_12460
CEJ46_12465	SM00671	Sel1-like repeats.
CEJ46_12475	SM00788	Adenylosuccinate synthetase
CEJ46_12505	SM00382	ATPases associated with a variety of cellular activities
CEJ46_12530	SM00100	Cyclic nucleotide-monophosphate binding domain
CEJ46_12530	SM00419	helix_turn_helix, cAMP Regulatory protein
CEJ46_12535	SM01150	CEJ46_12535
CEJ46_12630	SM00965	Secretin and TonB N terminus short domain
CEJ46_12695	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CEJ46_12715	SM00971	Serine acetyltransferase, N-terminal
CEJ46_12730	SM00450	Rhodanese Homology Domain
CEJ46_12760	SM00841	Elongation factor P, C-terminal
CEJ46_12760	SM01185	CEJ46_12760
CEJ46_12785	SM00883	Chaperonin 10 Kd subunit
CEJ46_12830	SM00382	ATPases associated with a variety of cellular activities
CEJ46_12830	SM01086	C-terminal, D2-small domain, of ClpB protein
CEJ46_12845	SM00354	helix_turn _helix lactose operon repressor
CEJ46_12850	SM00487	DEAD-like helicases superfamily
CEJ46_12850	SM00490	helicase superfamily c-terminal domain
CEJ46_12860	SM00919	Malic enzyme, NAD binding domain
CEJ46_12860	SM01274	CEJ46_12860
CEJ46_12910	SM00448	cheY-homologous receiver domain
CEJ46_12910	SM00862	Transcriptional regulatory protein, C terminal
CEJ46_12915	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_12915	SM00387	Histidine kinase-like ATPases
CEJ46_12915	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_12925	SM00357	Cold shock protein domain
CEJ46_12990	SM00421	helix_turn_helix, Lux Regulon
CEJ46_12990	SM00448	cheY-homologous receiver domain
CEJ46_12995	SM01091	Transporter associated domain
CEJ46_13010	SM00387	Histidine kinase-like ATPases
CEJ46_13010	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_13010	SM00448	cheY-homologous receiver domain
CEJ46_13025	SM00479	CEJ46_13025
CEJ46_13045	SM00878	Biotin carboxylase C-terminal domain
CEJ46_13065	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_13065	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_13065	SM01049	CEJ46_13065
CEJ46_13070	SM00422	helix_turn_helix, mercury resistance
CEJ46_13075	SM00798	AICARFT/IMPCHase bienzyme
CEJ46_13075	SM00851	MGS-like domain
CEJ46_13080	SM01209	CEJ46_13080
CEJ46_13080	SM01210	CEJ46_13080
CEJ46_13090	SM00411	bacterial (prokaryotic) histone like domain
CEJ46_13125	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_13125	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_13130	SM00849	Metallo-beta-lactamase superfamily
CEJ46_13130	SM01027	Beta-Casp domain
CEJ46_13150	SM00984	UDP binding domain
CEJ46_13185	SM00226	Low molecular weight phosphatase family
CEJ46_13310	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CEJ46_13350	SM00382	ATPases associated with a variety of cellular activities
CEJ46_13460	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CEJ46_13460	SM01232	CEJ46_13460
CEJ46_13530	SM00530	Helix-turn-helix XRE-family like proteins 
CEJ46_13570	SM00382	ATPases associated with a variety of cellular activities
CEJ46_13580	SM00382	ATPases associated with a variety of cellular activities
CEJ46_13610	SM00341	Helicase and RNase D C-terminal
CEJ46_13610	SM00487	DEAD-like helicases superfamily
CEJ46_13610	SM00490	helicase superfamily c-terminal domain
CEJ46_13610	SM00956	CEJ46_13610
CEJ46_13625	SM00342	helix_turn_helix, arabinose operon control protein
CEJ46_13675	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_13675	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_13685	SM00448	cheY-homologous receiver domain
CEJ46_13715	SM00382	ATPases associated with a variety of cellular activities
CEJ46_13785	SM00729	Elongator protein 3, MiaB family, Radical SAM
CEJ46_13815	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CEJ46_13815	SM00474	3'-5' exonuclease
CEJ46_13815	SM00475	5'-3' exonuclease
CEJ46_13815	SM00482	DNA polymerase A domain
CEJ46_13820	SM01004	Delta-aminolevulinic acid dehydratase
CEJ46_13870	SM00342	helix_turn_helix, arabinose operon control protein
CEJ46_13885	SM01007	Class II Aldolase and Adducin N-terminal domain
CEJ46_13905	SM00382	ATPases associated with a variety of cellular activities
CEJ46_13945	SM00382	ATPases associated with a variety of cellular activities
CEJ46_13990	SM00020	Trypsin-like serine protease
CEJ46_14005	SM01119	CEJ46_14005
CEJ46_14045	SM00487	DEAD-like helicases superfamily
CEJ46_14055	SM00530	Helix-turn-helix XRE-family like proteins 
CEJ46_14095	SM00382	ATPases associated with a variety of cellular activities
CEJ46_14150	SM00344	helix_turn_helix ASNC type
CEJ46_14175	SM00876	Biotin and Thiamin Synthesis associated domain
CEJ46_14330	SM00382	ATPases associated with a variety of cellular activities
CEJ46_14370	SM00470	ParB-like nuclease domain
CEJ46_14385	SM01228	CEJ46_14385
CEJ46_14475	SM00849	Metallo-beta-lactamase superfamily
CEJ46_14490	SM00342	helix_turn_helix, arabinose operon control protein
CEJ46_14490	SM00478	endonuclease III
CEJ46_14490	SM01009	AlkA N-terminal domain
CEJ46_14580	SM00347	helix_turn_helix multiple antibiotic resistance protein
CEJ46_14595	SM00450	Rhodanese Homology Domain
CEJ46_14605	SM00382	ATPases associated with a variety of cellular activities
CEJ46_14620	SM00382	ATPases associated with a variety of cellular activities
CEJ46_14645	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CEJ46_14645	SM00866	CEJ46_14645
CEJ46_14650	SM00487	DEAD-like helicases superfamily
CEJ46_14650	SM00490	helicase superfamily c-terminal domain
CEJ46_14685	SM00829	Enoylreductase
CEJ46_14705	SM00448	cheY-homologous receiver domain
CEJ46_14705	SM00862	Transcriptional regulatory protein, C terminal
CEJ46_14710	SM00387	Histidine kinase-like ATPases
CEJ46_14770	SM00382	ATPases associated with a variety of cellular activities
CEJ46_14770	SM01086	C-terminal, D2-small domain, of ClpB protein
CEJ46_14775	SM00382	ATPases associated with a variety of cellular activities
CEJ46_14860	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
CEJ46_14860	SM00495	Chitin-binding domain type 3
CEJ46_14860	SM00636	CEJ46_14860
CEJ46_14865	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CEJ46_14870	SM00382	ATPases associated with a variety of cellular activities
CEJ46_14880	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_14880	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_14900	SM00014	Acid phosphatase homologues
CEJ46_14910	SM00382	ATPases associated with a variety of cellular activities
CEJ46_14920	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CEJ46_14920	SM00267	diguanylate cyclase
CEJ46_14935	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CEJ46_14945	SM01007	Class II Aldolase and Adducin N-terminal domain
CEJ46_14960	SM00420	helix_turn_helix, Deoxyribose operon repressor
CEJ46_14960	SM01134	CEJ46_14960
CEJ46_14970	SM00642	Alpha-amylase domain
CEJ46_14985	SM00642	Alpha-amylase domain
CEJ46_14990	SM00671	Sel1-like repeats.
CEJ46_15055	SM00267	diguanylate cyclase
CEJ46_15060	SM00028	Tetratricopeptide repeats
CEJ46_15080	SM00422	helix_turn_helix, mercury resistance
CEJ46_15090	SM00257	Lysin motif
CEJ46_15100	SM00487	DEAD-like helicases superfamily
CEJ46_15100	SM00490	helicase superfamily c-terminal domain
CEJ46_15150	SM00642	Alpha-amylase domain
CEJ46_15165	SM00382	ATPases associated with a variety of cellular activities
CEJ46_15190	SM00448	cheY-homologous receiver domain
CEJ46_15190	SM00850	LytTr DNA-binding domain
CEJ46_15195	SM00052	Putative diguanylate phosphodiesterase
CEJ46_15215	SM00448	cheY-homologous receiver domain
CEJ46_15215	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CEJ46_15220	SM00073	Histidine Phosphotransfer domain
CEJ46_15220	SM00091	PAS domain
CEJ46_15220	SM00387	Histidine kinase-like ATPases
CEJ46_15220	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_15220	SM00448	cheY-homologous receiver domain
CEJ46_15225	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_15225	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_15255	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CEJ46_15260	SM00387	Histidine kinase-like ATPases
CEJ46_15260	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_15260	SM00448	cheY-homologous receiver domain
CEJ46_15305	SM01266	CEJ46_15305
CEJ46_15360	SM00342	helix_turn_helix, arabinose operon control protein
CEJ46_15365	SM00448	cheY-homologous receiver domain
CEJ46_15370	SM00387	Histidine kinase-like ATPases
CEJ46_15400	SM00344	helix_turn_helix ASNC type
CEJ46_15410	SM00458	Ricin-type beta-trefoil
CEJ46_15425	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
CEJ46_15465	SM00382	ATPases associated with a variety of cellular activities
CEJ46_15580	SM00530	Helix-turn-helix XRE-family like proteins 
CEJ46_15590	SM00020	Trypsin-like serine protease
CEJ46_15630	SM00354	helix_turn _helix lactose operon repressor
CEJ46_15645	SM00387	Histidine kinase-like ATPases
CEJ46_15645	SM00448	cheY-homologous receiver domain
CEJ46_15670	SM00382	ATPases associated with a variety of cellular activities
CEJ46_15760	SM00420	helix_turn_helix, Deoxyribose operon repressor
CEJ46_15760	SM01134	CEJ46_15760
CEJ46_15780	SM00382	ATPases associated with a variety of cellular activities
CEJ46_15815	SM00642	Alpha-amylase domain
CEJ46_15860	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CEJ46_15875	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_15875	SM00387	Histidine kinase-like ATPases
CEJ46_15880	SM00421	helix_turn_helix, Lux Regulon
CEJ46_15880	SM00448	cheY-homologous receiver domain
CEJ46_15920	SM00316	Ribosomal protein S1-like RNA-binding domain
CEJ46_15920	SM00357	Cold shock protein domain
CEJ46_15920	SM00955	CEJ46_15920
CEJ46_15925	SM00487	DEAD-like helicases superfamily
CEJ46_15925	SM00490	helicase superfamily c-terminal domain
CEJ46_15930	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CEJ46_16340	SM00360	RNA recognition motif
CEJ46_16345	SM01022	CEJ46_16345
CEJ46_16570	SM01022	CEJ46_16570
CEJ46_16610	SM01022	CEJ46_16610
CEJ46_16715	SM00507	HNH nucleases
CEJ46_16985	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CEJ46_16990	SM00506	Appr-1"-p processing enzyme
CEJ46_17040	SM01022	CEJ46_17040
CEJ46_17140	SM00881	CoA binding domain
CEJ46_17190	SM00448	cheY-homologous receiver domain
CEJ46_17190	SM00862	Transcriptional regulatory protein, C terminal
CEJ46_17195	SM00387	Histidine kinase-like ATPases
CEJ46_17195	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_17205	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CEJ46_17205	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CEJ46_17220	SM00267	diguanylate cyclase
CEJ46_17225	SM00357	Cold shock protein domain
CEJ46_17235	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_17235	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_17265	SM00382	ATPases associated with a variety of cellular activities
CEJ46_17290	SM00782	PhnA Zinc-Ribbon
CEJ46_17325	SM00116	Domain in cystathionine beta-synthase and other proteins.
CEJ46_17345	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CEJ46_17345	SM00866	CEJ46_17345
CEJ46_17395	SM00852	Probable molybdopterin binding domain
CEJ46_17405	SM00450	Rhodanese Homology Domain
CEJ46_17410	SM00636	CEJ46_17410
CEJ46_17425	SM00861	Transketolase, pyrimidine binding domain
CEJ46_17450	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_17455	SM00867	YceI-like domain 
CEJ46_17470	SM00052	Putative diguanylate phosphodiesterase
CEJ46_17475	SM00382	ATPases associated with a variety of cellular activities
CEJ46_17525	SM00062	Bacterial periplasmic substrate-binding proteins
CEJ46_17525	SM00267	diguanylate cyclase
CEJ46_17555	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CEJ46_17565	SM00450	Rhodanese Homology Domain
CEJ46_17570	SM00448	cheY-homologous receiver domain
CEJ46_17575	SM00052	Putative diguanylate phosphodiesterase
CEJ46_17575	SM00267	diguanylate cyclase
CEJ46_17575	SM00448	cheY-homologous receiver domain
CEJ46_17580	SM00387	Histidine kinase-like ATPases
CEJ46_17580	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_17585	SM00387	Histidine kinase-like ATPases
CEJ46_17595	SM00448	cheY-homologous receiver domain
CEJ46_17600	SM00448	cheY-homologous receiver domain
CEJ46_17630	SM00382	ATPases associated with a variety of cellular activities
CEJ46_17660	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CEJ46_17660	SM00267	diguanylate cyclase
CEJ46_17670	SM00495	Chitin-binding domain type 3
CEJ46_17670	SM00636	CEJ46_17670
CEJ46_17675	SM00342	helix_turn_helix, arabinose operon control protein
CEJ46_17695	SM00862	Transcriptional regulatory protein, C terminal
CEJ46_17715	SM00073	Histidine Phosphotransfer domain
CEJ46_17715	SM00387	Histidine kinase-like ATPases
CEJ46_17715	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_17715	SM00448	cheY-homologous receiver domain
CEJ46_17725	SM00851	MGS-like domain
CEJ46_17765	SM00387	Histidine kinase-like ATPases
CEJ46_17765	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_17765	SM00448	cheY-homologous receiver domain
CEJ46_17915	SM00347	helix_turn_helix multiple antibiotic resistance protein
CEJ46_17950	SM00327	von Willebrand factor (vWF) type A domain
CEJ46_17955	SM00382	ATPases associated with a variety of cellular activities
CEJ46_17975	SM00487	DEAD-like helicases superfamily
CEJ46_17975	SM00490	helicase superfamily c-terminal domain
CEJ46_17985	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_18000	SM00796	Allophanate hydrolase subunit 1
CEJ46_18005	SM00797	Allophanate hydrolase subunit 2
CEJ46_18020	SM00382	ATPases associated with a variety of cellular activities
CEJ46_18035	SM00052	Putative diguanylate phosphodiesterase
CEJ46_18035	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CEJ46_18035	SM00267	diguanylate cyclase
CEJ46_18045	SM00271	DnaJ molecular chaperone homology domain
CEJ46_18065	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CEJ46_18095	SM00248	ankyrin repeats
CEJ46_18095	SM00530	Helix-turn-helix XRE-family like proteins 
CEJ46_18095	SM00670	Large family of predicted nucleotide-binding domains
CEJ46_18120	SM00052	Putative diguanylate phosphodiesterase
CEJ46_18120	SM00267	diguanylate cyclase
CEJ46_18125	SM01057	Eukaryotic-type carbonic anhydrase
CEJ46_18135	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_18135	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_18150	SM00028	Tetratricopeptide repeats
CEJ46_18155	SM00116	Domain in cystathionine beta-synthase and other proteins.
CEJ46_18155	SM00382	ATPases associated with a variety of cellular activities
CEJ46_18170	SM00347	helix_turn_helix multiple antibiotic resistance protein
CEJ46_18245	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_18245	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_18250	SM00642	Alpha-amylase domain
CEJ46_18265	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_18265	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_18285	SM00327	von Willebrand factor (vWF) type A domain
CEJ46_18290	SM00028	Tetratricopeptide repeats
CEJ46_18305	SM00267	diguanylate cyclase
CEJ46_18315	SM00507	HNH nucleases
CEJ46_18350	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CEJ46_18385	SM00829	Enoylreductase
CEJ46_18415	SM00421	helix_turn_helix, Lux Regulon
CEJ46_18415	SM00448	cheY-homologous receiver domain
CEJ46_18420	SM00387	Histidine kinase-like ATPases
CEJ46_18435	SM00481	DNA polymerase alpha chain like domain
CEJ46_18440	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CEJ46_18460	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CEJ46_18465	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CEJ46_18475	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CEJ46_18495	SM00387	Histidine kinase-like ATPases
CEJ46_18495	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_18495	SM00448	cheY-homologous receiver domain
CEJ46_18505	SM00342	helix_turn_helix, arabinose operon control protein
CEJ46_18510	SM00342	helix_turn_helix, arabinose operon control protein
CEJ46_18525	SM00823	Phosphopantetheine attachment site
CEJ46_18530	SM00822	CEJ46_18530
CEJ46_18530	SM00823	Phosphopantetheine attachment site
CEJ46_18530	SM00825	Beta-ketoacyl synthase
CEJ46_18530	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CEJ46_18555	SM00382	ATPases associated with a variety of cellular activities
CEJ46_18560	SM00382	ATPases associated with a variety of cellular activities
CEJ46_18600	SM00448	cheY-homologous receiver domain
CEJ46_18600	SM00862	Transcriptional regulatory protein, C terminal
CEJ46_18605	SM00387	Histidine kinase-like ATPases
CEJ46_18605	SM00388	His Kinase A (phosphoacceptor) domain
CEJ46_18610	SM00342	helix_turn_helix, arabinose operon control protein
CEJ46_18645	SM00382	ATPases associated with a variety of cellular activities
CEJ46_18660	SM01119	CEJ46_18660
CEJ46_18675	SM00020	Trypsin-like serine protease
CEJ46_18720	SM00487	DEAD-like helicases superfamily
CEJ46_18720	SM00490	helicase superfamily c-terminal domain
CEJ46_18740	SM00487	DEAD-like helicases superfamily
CEJ46_18745	SM00382	ATPases associated with a variety of cellular activities
CEJ46_18770	SM00530	Helix-turn-helix XRE-family like proteins 
CEJ46_18810	SM00530	Helix-turn-helix XRE-family like proteins 
CEJ46_18820	SM00487	DEAD-like helicases superfamily
CEJ46_18830	SM00382	ATPases associated with a variety of cellular activities
CEJ46_18845	SM01240	CEJ46_18845
CEJ46_18860	SM00448	cheY-homologous receiver domain
CEJ46_18875	SM00357	Cold shock protein domain
CEJ46_18880	SM01322	CEJ46_18880
CEJ46_18890	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CEJ46_18890	SM00382	ATPases associated with a variety of cellular activities
CEJ46_18940	SM00342	helix_turn_helix, arabinose operon control protein
CEJ46_18950	SM00091	PAS domain
CEJ46_18950	SM00267	diguanylate cyclase
CEJ46_18955	SM00420	helix_turn_helix, Deoxyribose operon repressor
CEJ46_18955	SM01134	CEJ46_18955
CEJ46_18960	SM00421	helix_turn_helix, Lux Regulon
CEJ46_19000	SM00382	ATPases associated with a variety of cellular activities
CEJ46_19005	SM00421	helix_turn_helix, Lux Regulon
CEJ46_19015	SM00260	Two component signalling adaptor domain
CEJ46_19015	SM00448	cheY-homologous receiver domain
CEJ46_19025	SM00267	diguanylate cyclase
CEJ46_19035	SM00530	Helix-turn-helix XRE-family like proteins 
CEJ46_19040	SM00267	diguanylate cyclase
CEJ46_19040	SM01079	CEJ46_19040
CEJ46_19060	SM00267	diguanylate cyclase
CEJ46_19075	SM00062	Bacterial periplasmic substrate-binding proteins
CEJ46_19095	SM00382	ATPases associated with a variety of cellular activities
CEJ46_19105	SM00062	Bacterial periplasmic substrate-binding proteins
CEJ46_19105	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CEJ46_19170	SM00052	Putative diguanylate phosphodiesterase
CEJ46_19170	SM00267	diguanylate cyclase
CEJ46_19200	SM00267	diguanylate cyclase
CEJ46_19205	SM00382	ATPases associated with a variety of cellular activities
CEJ46_19230	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CEJ46_19245	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
CEJ46_19265	SM00495	Chitin-binding domain type 3
CEJ46_19295	SM00822	CEJ46_19295
CEJ46_19300	SM00382	ATPases associated with a variety of cellular activities
CEJ46_19310	SM00342	helix_turn_helix, arabinose operon control protein
CEJ46_19335	SM00342	helix_turn_helix, arabinose operon control protein
CEJ46_19370	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_19380	SM01321	CEJ46_19380
CEJ46_19385	SM00354	helix_turn _helix lactose operon repressor
CEJ46_19395	SM00382	ATPases associated with a variety of cellular activities
CEJ46_19415	SM00354	helix_turn _helix lactose operon repressor
CEJ46_19435	SM00849	Metallo-beta-lactamase superfamily
CEJ46_19445	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_19445	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_19470	SM01350	CEJ46_19470
CEJ46_19475	SM00849	Metallo-beta-lactamase superfamily
CEJ46_19485	SM00354	helix_turn _helix lactose operon repressor
CEJ46_19505	SM00382	ATPases associated with a variety of cellular activities
CEJ46_19535	SM00642	Alpha-amylase domain
CEJ46_19550	SM00421	helix_turn_helix, Lux Regulon
CEJ46_19560	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_19560	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_19560	SM01049	CEJ46_19560
CEJ46_19570	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_19590	SM00344	helix_turn_helix ASNC type
CEJ46_19595	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_19595	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_19620	SM00342	helix_turn_helix, arabinose operon control protein
CEJ46_19635	SM00421	helix_turn_helix, Lux Regulon
CEJ46_19655	SM00052	Putative diguanylate phosphodiesterase
CEJ46_19655	SM00267	diguanylate cyclase
CEJ46_19660	SM00382	ATPases associated with a variety of cellular activities
CEJ46_19670	SM00331	Sigma factor PP2C-like phosphatases
CEJ46_19670	SM00448	cheY-homologous receiver domain
CEJ46_19680	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_19685	SM00448	cheY-homologous receiver domain
CEJ46_19695	SM00138	Methyltransferase, chemotaxis proteins 
CEJ46_19700	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CEJ46_19700	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CEJ46_19705	SM00260	Two component signalling adaptor domain
CEJ46_19710	SM00260	Two component signalling adaptor domain
CEJ46_19715	SM00073	Histidine Phosphotransfer domain
CEJ46_19715	SM00260	Two component signalling adaptor domain
CEJ46_19715	SM00387	Histidine kinase-like ATPases
CEJ46_19715	SM01231	CEJ46_19715
CEJ46_19720	SM00448	cheY-homologous receiver domain
CEJ46_19740	SM00470	ParB-like nuclease domain
