locus-tag class description N175_00010 PF00175 Oxidoreductase NAD-binding domain N175_00015 PF00970 Oxidoreductase FAD-binding domain N175_00015 PF00111 2Fe-2S iron-sulfur cluster binding domain N175_00015 PF00175 Oxidoreductase NAD-binding domain N175_00020 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase N175_00030 PF07497 Rho termination factor, RNA-binding domain N175_00030 PF07498 Rho termination factor, N-terminal domain N175_00030 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N175_00035 PF00085 Thioredoxin N175_00040 PF00271 Helicase conserved C-terminal domain N175_00040 PF00270 DEAD/DEAH box helicase N175_00045 PF02541 Ppx/GppA phosphatase family N175_00050 PF02592 Putative vitamin uptake transporter N175_00060 PF00625 Guanylate kinase N175_00065 PF01192 RNA polymerase Rpb6 N175_00070 PF02824 TGS domain N175_00070 PF04607 Region found in RelA / SpoT proteins N175_00070 PF13291 ACT domain N175_00075 PF17191 RecG wedge domain N175_00075 PF00271 Helicase conserved C-terminal domain N175_00075 PF00270 DEAD/DEAH box helicase N175_00080 PF00860 Permease family N175_00085 PF00512 His Kinase A (phospho-acceptor) domain N175_00085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N175_00085 PF00672 HAMP domain N175_00090 PF00486 Transcriptional regulatory protein, C terminal N175_00090 PF00072 Response regulator receiver domain N175_00095 PF00704 Glycosyl hydrolases family 18 N175_00095 PF06483 Chitinase C N175_00105 PF00881 Nitroreductase family N175_00115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N175_00115 PF03466 LysR substrate binding domain N175_00125 PF06942 GlpM protein N175_00140 PF01272 Transcription elongation factor, GreA/GreB, C-term N175_00140 PF03449 Transcription elongation factor, N-terminal N175_00145 PF16921 Tex protein YqgF-like domain N175_00145 PF09371 Tex-like protein N-terminal domain N175_00145 PF00575 S1 RNA binding domain N175_00145 PF17674 HHH domain N175_00155 PF00561 alpha/beta hydrolase fold N175_00165 PF00156 Phosphoribosyl transferase domain N175_00170 PF01521 Iron-sulphur cluster biosynthesis N175_00170 PF01106 NifU-like domain N175_00175 PF00293 NUDIX domain N175_00180 PF00459 Inositol monophosphatase family N175_00190 PF04612 Type II secretion system (T2SS), protein M N175_00195 PF05134 Type II secretion system (T2SS), protein L N175_00195 PF12693 GspL periplasmic domain N175_00200 PF03934 Type II secretion system (T2SS), protein K N175_00205 PF07963 Prokaryotic N-terminal methylation motif N175_00205 PF11612 Type II secretion system (T2SS), protein J N175_00210 PF02501 Type II secretion system (T2SS), protein I N175_00210 PF07963 Prokaryotic N-terminal methylation motif N175_00215 PF12019 Type II transport protein GspH N175_00220 PF07963 Prokaryotic N-terminal methylation motif N175_00220 PF08334 Type II secretion system (T2SS), protein G N175_00225 PF00482 Type II secretion system (T2SS), protein F N175_00230 PF00437 Type II/IV secretion system protein N175_00235 PF03958 Bacterial type II/III secretion system short domain N175_00235 PF00263 Bacterial type II and III secretion system protein N175_00240 PF11356 Type II secretion system protein C N175_00245 PF01479 S4 domain N175_00250 PF01430 Hsp33 protein N175_00260 PF01293 Phosphoenolpyruvate carboxykinase N175_00270 PF00583 Acetyltransferase (GNAT) family N175_00270 PF09500 Putative thioesterase (yiiD_Cterm) N175_00275 PF02580 D-Tyr-tRNA(Tyr) deacylase N175_00280 PF03631 Virulence factor BrkB N175_00290 PF03951 Glutamine synthetase, beta-Grasp domain N175_00290 PF00120 Glutamine synthetase, catalytic domain N175_00300 PF00512 His Kinase A (phospho-acceptor) domain N175_00300 PF00989 PAS fold N175_00300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N175_00305 PF00072 Response regulator receiver domain N175_00305 PF02954 Bacterial regulatory protein, Fis family N175_00305 PF00158 Sigma-54 interaction domain N175_00310 PF03707 Bacterial signalling protein N terminal repeat N175_00310 PF13188 PAS domain N175_00310 PF00563 EAL domain N175_00310 PF00990 Diguanylate cyclase, GGDEF domain N175_00315 PF00962 Adenosine/AMP deaminase N175_00355 PF01177 Asp/Glu/Hydantoin racemase N175_00365 PF00593 TonB dependent receptor N175_00365 PF07715 TonB-dependent Receptor Plug Domain N175_00390 PF01381 Helix-turn-helix N175_00400 PF07804 HipA-like C-terminal domain N175_00400 PF13657 HipA N-terminal domain N175_00440 PF02796 Helix-turn-helix domain of resolvase N175_00440 PF00239 Resolvase, N terminal domain N175_00465 PF05958 tRNA (Uracil-5-)-methyltransferase N175_00475 PF16353 Domain of unknown function(DUF4981) N175_00475 PF02836 Glycosyl hydrolases family 2, TIM barrel domain N175_00475 PF02929 Beta galactosidase small chain N175_00475 PF02837 Glycosyl hydrolases family 2, sugar binding domain N175_00475 PF00703 Glycosyl hydrolases family 2 N175_00480 PF07226 Protein of unknown function (DUF1422) N175_00485 PF00440 Bacterial regulatory proteins, tetR family N175_00490 PF01554 MatE N175_00510 PF01553 Acyltransferase N175_00515 PF01040 UbiA prenyltransferase family N175_00520 PF04345 Chorismate lyase N175_00525 PF03748 Flagellar basal body-associated protein FliL N175_00530 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease N175_00530 PF01694 Rhomboid family N175_00535 PF00581 Rhodanese-like domain N175_00545 PF04545 Sigma-70, region 4 N175_00545 PF04542 Sigma-70 region 2 N175_00545 PF00140 Sigma-70 factor, region 1.2 N175_00550 PF18075 FtsX extracellular domain N175_00555 PF00005 ABC transporter N175_00560 PF02881 SRP54-type protein, helical bundle domain N175_00560 PF00448 SRP54-type protein, GTPase domain N175_00575 PF01914 MarC family integral membrane protein N175_00585 PF13737 Transposase DDE domain N175_00610 PF13005 zinc-finger binding domain of transposase IS66 N175_00610 PF13007 Transposase C of IS166 homeodomain N175_00610 PF13817 IS66 C-terminal element N175_00610 PF03050 Transposase IS66 family N175_00615 PF01914 MarC family integral membrane protein N175_00645 PF00210 Ferritin-like domain N175_00650 PF08668 HDOD domain N175_00650 PF00563 EAL domain N175_00655 PF01810 LysE type translocator N175_00660 PF12146 Serine aminopeptidase, S33 N175_00685 PF13419 Haloacid dehalogenase-like hydrolase N175_00690 PF00589 Phage integrase family N175_00690 PF02899 Phage integrase, N-terminal SAM-like domain N175_00700 PF01678 Diaminopimelate epimerase N175_00705 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain N175_00705 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain N175_00715 PF01491 Frataxin-like domain N175_00720 PF01295 Adenylate cyclase, class-I N175_00720 PF12633 Adenylate cyclase NT domain N175_00725 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain N175_00725 PF03900 Porphobilinogen deaminase, C-terminal domain N175_00730 PF02602 Uroporphyrinogen-III synthase HemD N175_00735 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase N175_00740 PF07219 HemY protein N-terminus N175_00770 PF00132 Bacterial transferase hexapeptide (six repeats) N175_00775 PF07369 Protein of unknown function (DUF1488) N175_00780 PF08501 Shikimate dehydrogenase substrate binding domain N175_00780 PF18317 Shikimate 5'-dehydrogenase C-terminal domain N175_00780 PF01488 Shikimate / quinate 5-dehydrogenase N175_00785 PF01218 Coproporphyrinogen III oxidase N175_00790 PF01300 Telomere recombination N175_00795 PF00731 AIR carboxylase N175_00800 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain N175_00800 PF02222 ATP-grasp domain N175_00805 PF01396 Topoisomerase DNA binding C4 zinc finger N175_00810 PF04361 Protein of unknown function (DUF494) N175_00815 PF02481 DNA recombination-mediator protein A N175_00815 PF17782 DprA winged helix domain N175_00820 PF01476 LysM domain N175_00825 PF01327 Polypeptide deformylase N175_00830 PF02911 Formyl transferase, C-terminal domain N175_00830 PF00551 Formyl transferase N175_00835 PF01189 16S rRNA methyltransferase RsmB/F N175_00835 PF01029 NusB family N175_00840 PF02080 TrkA-C domain N175_00840 PF02254 TrkA-N domain N175_00845 PF02386 Cation transport protein N175_00855 PF03006 Haemolysin-III related N175_00865 PF06288 Protein of unknown function (DUF1040) N175_00870 PF13746 4Fe-4S dicluster domain N175_00870 PF12801 4Fe-4S binding domain N175_00870 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase N175_00875 PF01636 Phosphotransferase enzyme family N175_00880 PF01323 DSBA-like thioredoxin domain N175_00890 PF13005 zinc-finger binding domain of transposase IS66 N175_00890 PF03050 Transposase IS66 family N175_00890 PF13817 IS66 C-terminal element N175_00890 PF13007 Transposase C of IS166 homeodomain N175_00965 PF13335 Magnesium chelatase, subunit ChlI C-terminal N175_00965 PF01078 Magnesium chelatase, subunit ChlI N175_00970 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N175_00970 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N175_00970 PF00205 Thiamine pyrophosphate enzyme, central domain N175_00980 PF01063 Amino-transferase class IV N175_00985 PF00920 Dehydratase family N175_00990 PF00585 C-terminal regulatory domain of Threonine dehydratase N175_00990 PF00291 Pyridoxal-phosphate dependent enzyme N175_00995 PF08240 Alcohol dehydrogenase GroES-like domain N175_00995 PF00107 Zinc-binding dehydrogenase N175_01000 PF03466 LysR substrate binding domain N175_01000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N175_01010 PF01206 Sulfurtransferase TusA N175_01020 PF01169 Uncharacterized protein family UPF0016 N175_01025 PF02091 Glycyl-tRNA synthetase alpha subunit N175_01030 PF05746 DALR anticodon binding domain N175_01030 PF02092 Glycyl-tRNA synthetase beta subunit N175_01035 PF00155 Aminotransferase class I and II N175_01040 PF00011 Hsp20/alpha crystallin family N175_01055 PF01751 Toprim domain N175_01055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N175_01055 PF18053 DNA gyrase B subunit insert domain N175_01055 PF00986 DNA gyrase B subunit, carboxyl terminus N175_01055 PF00204 DNA gyrase B N175_01060 PF02463 RecF/RecN/SMC N terminal domain N175_01065 PF02768 DNA polymerase III beta subunit, C-terminal domain N175_01065 PF00712 DNA polymerase III beta subunit, N-terminal domain N175_01065 PF02767 DNA polymerase III beta subunit, central domain N175_01070 PF08299 Bacterial dnaA protein helix-turn-helix N175_01070 PF00308 Bacterial dnaA protein N175_01070 PF11638 DnaA N-terminal domain N175_01075 PF00497 Bacterial extracellular solute-binding proteins, family 3 N175_01085 PF00005 ABC transporter N175_01090 PF00468 Ribosomal protein L34 N175_01095 PF00825 Ribonuclease P N175_01100 PF01809 Putative membrane protein insertion efficiency factor N175_01105 PF02096 60Kd inner membrane protein N175_01105 PF14849 YidC periplasmic domain N175_01110 PF12631 MnmE helical domain N175_01110 PF10396 GTP-binding protein TrmE N-terminus N175_01110 PF01926 50S ribosome-binding GTPase N175_01115 PF00258 Flavodoxin N175_01120 PF01134 Glucose inhibited division protein A N175_01120 PF13932 GidA associated domain N175_01125 PF02527 rRNA small subunit methyltransferase G N175_01130 PF13614 AAA domain N175_01135 PF02195 ParB-like nuclease domain N175_01135 PF17762 HTH domain found in ParB protein N175_01140 PF03899 ATP synthase I chain N175_01145 PF00119 ATP synthase A chain N175_01150 PF00137 ATP synthase subunit C N175_01155 PF00430 ATP synthase B/B' CF(0) N175_01160 PF00213 ATP synthase delta (OSCP) subunit N175_01165 PF02874 ATP synthase alpha/beta family, beta-barrel domain N175_01165 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N175_01165 PF00306 ATP synthase alpha/beta chain, C terminal domain N175_01170 PF00231 ATP synthase N175_01175 PF02874 ATP synthase alpha/beta family, beta-barrel domain N175_01175 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N175_01180 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain N175_01180 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain N175_01185 PF12804 MobA-like NTP transferase domain N175_01185 PF14602 Hexapeptide repeat of succinyl-transferase N175_01185 PF00132 Bacterial transferase hexapeptide (six repeats) N175_01190 PF07690 Major Facilitator Superfamily N175_01195 PF03466 LysR substrate binding domain N175_01195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N175_01200 PF02803 Thiolase, C-terminal domain N175_01200 PF00108 Thiolase, N-terminal domain N175_01205 PF00378 Enoyl-CoA hydratase/isomerase N175_01205 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain N175_01205 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain N175_01210 PF01205 Uncharacterized protein family UPF0029 N175_01210 PF09186 Domain of unknown function (DUF1949) N175_01215 PF02386 Cation transport protein N175_01220 PF12724 Flavodoxin domain N175_01260 PF02537 CrcB-like protein, Camphor Resistance (CrcB) N175_01265 PF13667 ThiC-associated domain N175_01265 PF01964 Radical SAM ThiC family N175_01270 PF02581 Thiamine monophosphate synthase N175_01275 PF00899 ThiF family N175_01280 PF02597 ThiS family N175_01285 PF05690 Thiazole biosynthesis protein ThiG N175_01290 PF06968 Biotin and Thiamin Synthesis associated domain N175_01290 PF04055 Radical SAM superfamily N175_01295 PF01321 Creatinase/Prolidase N-terminal domain N175_01295 PF00557 Metallopeptidase family M24 N175_01295 PF01321 Creatinase/Prolidase N-terminal domain N175_01295 PF00557 Metallopeptidase family M24 N175_01300 PF03466 LysR substrate binding domain N175_01300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N175_01305 PF07690 Major Facilitator Superfamily N175_01310 PF13737 Transposase DDE domain N175_01320 PF01037 Lrp/AsnC ligand binding domain N175_01325 PF04445 Putative SAM-dependent methyltransferase N175_01335 PF00892 EamA-like transporter family N175_01340 PF00582 Universal stress protein family N175_01345 PF00210 Ferritin-like domain N175_01350 PF10625 Universal stress protein B (UspB) N175_01365 PF06414 Zeta toxin N175_01370 PF02653 Branched-chain amino acid transport system / permease component N175_01375 PF00005 ABC transporter N175_01380 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family N175_01385 PF00370 FGGY family of carbohydrate kinases, N-terminal domain N175_01385 PF02782 FGGY family of carbohydrate kinases, C-terminal domain N175_01390 PF00596 Class II Aldolase and Adducin N-terminal domain N175_01395 PF11762 L-arabinose isomerase C-terminal domain N175_01395 PF02610 L-arabinose isomerase N175_01405 PF02311 AraC-like ligand binding domain N175_01405 PF12833 Helix-turn-helix domain N175_01415 PF02646 RmuC family N175_01420 PF01209 ubiE/COQ5 methyltransferase family N175_01425 PF02036 SCP-2 sterol transfer family N175_01430 PF03109 ABC1 family N175_01435 PF02416 mttA/Hcf106 family N175_01440 PF02416 mttA/Hcf106 family N175_01445 PF00902 Sec-independent protein translocase protein (TatC) N175_01450 PF01026 TatD related DNase N175_01455 PF00490 Delta-aminolevulinic acid dehydratase N175_01460 PF01612 3'-5' exonuclease N175_01460 PF00476 DNA polymerase family A N175_01460 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain N175_01460 PF01367 5'-3' exonuclease, C-terminal SAM fold N175_01465 PF01926 50S ribosome-binding GTPase N175_01470 PF00034 Cytochrome c N175_01480 PF04220 Der GTPase activator (YihI) N175_01485 PF10675 Protein of unknown function (DUF2489) N175_01490 PF06969 HemN C-terminal domain N175_01490 PF04055 Radical SAM superfamily N175_01495 PF03466 LysR substrate binding domain N175_01495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N175_01500 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain N175_01500 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain N175_01505 PF04380 Membrane fusogenic activity N175_01510 PF00873 AcrB/AcrD/AcrF family N175_01515 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N175_01520 PF00440 Bacterial regulatory proteins, tetR family N175_01520 PF08359 YsiA-like protein, C-terminal region N175_01525 PF13361 UvrD-like helicase C-terminal domain N175_01525 PF00580 UvrD/REP helicase N-terminal domain N175_01530 PF13442 Cytochrome C oxidase, cbb3-type, subunit III N175_01565 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N175_01565 PF00005 ABC transporter N175_01570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N175_01580 PF12911 N-terminal TM domain of oligopeptide transport permease C N175_01580 PF00528 Binding-protein-dependent transport system inner membrane component N175_01595 PF00072 Response regulator receiver domain N175_01635 PF03050 Transposase IS66 family N175_01635 PF13005 zinc-finger binding domain of transposase IS66 N175_01635 PF13007 Transposase C of IS166 homeodomain N175_01635 PF13817 IS66 C-terminal element N175_01655 PF04245 37-kD nucleoid-associated bacterial protein N175_01680 PF03050 Transposase IS66 family N175_01680 PF13817 IS66 C-terminal element N175_01680 PF13007 Transposase C of IS166 homeodomain N175_01680 PF13005 zinc-finger binding domain of transposase IS66 N175_01690 PF07693 KAP family P-loop domain N175_01705 PF13737 Transposase DDE domain N175_01730 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N175_01730 PF07992 Pyridine nucleotide-disulphide oxidoreductase N175_01735 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ N175_01740 PF01432 Peptidase family M3 N175_01745 PF00580 UvrD/REP helicase N-terminal domain N175_01745 PF13361 UvrD-like helicase C-terminal domain N175_01755 PF01810 LysE type translocator N175_01765 PF00892 EamA-like transporter family N175_01770 PF16124 RecQ zinc-binding N175_01770 PF09382 RQC domain N175_01770 PF00271 Helicase conserved C-terminal domain N175_01770 PF00270 DEAD/DEAH box helicase N175_01770 PF00570 HRDC domain N175_01785 PF01418 Helix-turn-helix domain, rpiR family N175_01785 PF01380 SIS domain N175_01790 PF01380 SIS domain N175_01795 PF00367 phosphotransferase system, EIIB N175_01795 PF02378 Phosphotransferase system, EIIC N175_01800 PF00005 ABC transporter N175_01800 PF00664 ABC transporter transmembrane region N175_01805 PF00593 TonB dependent receptor N175_01805 PF07715 TonB-dependent Receptor Plug Domain N175_01810 PF00005 ABC transporter N175_01815 PF01497 Periplasmic binding protein N175_01820 PF01032 FecCD transport family N175_01825 PF03350 Uncharacterized protein family, UPF0114 N175_01830 PF03350 Uncharacterized protein family, UPF0114 N175_01835 PF13737 Transposase DDE domain N175_01840 PF05193 Peptidase M16 inactive domain N175_01840 PF00675 Insulinase (Peptidase family M16) N175_01935 PF08340 Domain of unknown function (DUF1732) N175_01935 PF03755 YicC-like family, N-terminal region N175_01940 PF03725 3' exoribonuclease family, domain 2 N175_01940 PF01138 3' exoribonuclease family, domain 1 N175_01950 PF03279 Bacterial lipid A biosynthesis acyltransferase N175_01955 PF03279 Bacterial lipid A biosynthesis acyltransferase N175_01960 PF00440 Bacterial regulatory proteins, tetR family N175_01965 PF04127 DNA / pantothenate metabolism flavoprotein N175_01965 PF02441 Flavoprotein N175_01970 PF04002 RadC-like JAB domain N175_01980 PF00471 Ribosomal protein L33 N175_01990 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain N175_01990 PF06827 Zinc finger found in FPG and IleRS N175_01990 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain N175_01995 PF01467 Cytidylyltransferase-like N175_02000 PF01075 Glycosyltransferase family 9 (heptosyltransferase) N175_02005 PF00535 Glycosyl transferase family 2 N175_02010 PF01075 Glycosyltransferase family 9 (heptosyltransferase) N175_02030 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family N175_02035 PF00132 Bacterial transferase hexapeptide (six repeats) N175_02040 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) N175_02045 PF04488 Glycosyltransferase sugar-binding region containing DXD motif N175_02055 PF01075 Glycosyltransferase family 9 (heptosyltransferase) N175_02060 PF04932 O-Antigen ligase N175_02070 PF01370 NAD dependent epimerase/dehydratase family N175_02075 PF16363 GDP-mannose 4,6 dehydratase N175_02080 PF00483 Nucleotidyl transferase N175_02085 PF04321 RmlD substrate binding domain N175_02090 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase N175_02095 PF01061 ABC-2 type transporter N175_02100 PF00005 ABC transporter N175_02110 PF01609 Transposase DDE domain N175_02110 PF13808 DDE_Tnp_1-associated N175_02115 PF01609 Transposase DDE domain N175_02115 PF13808 DDE_Tnp_1-associated N175_02130 PF00970 Oxidoreductase FAD-binding domain N175_02130 PF00111 2Fe-2S iron-sulfur cluster binding domain N175_02130 PF00175 Oxidoreductase NAD-binding domain N175_02135 PF00483 Nucleotidyl transferase N175_02140 PF16363 GDP-mannose 4,6 dehydratase N175_02145 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family N175_02150 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N175_02150 PF00205 Thiamine pyrophosphate enzyme, central domain N175_02150 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N175_02160 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family N175_02165 PF00535 Glycosyl transferase family 2 N175_02175 PF05523 WxcM-like, C-terminal N175_02185 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family N175_02190 PF00535 Glycosyl transferase family 2 N175_02195 PF05045 Rhamnan synthesis protein F N175_02200 PF00535 Glycosyl transferase family 2 N175_02210 PF02719 Polysaccharide biosynthesis protein N175_02215 PF01370 NAD dependent epimerase/dehydratase family N175_02220 PF02397 Bacterial sugar transferase N175_02230 PF06082 Exopolysaccharide biosynthesis protein YbjH N175_02240 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF N175_02250 PF10531 SLBB domain N175_02250 PF18412 Outer-membrane lipoprotein Wza C-terminal domain N175_02250 PF02563 Polysaccharide biosynthesis/export protein N175_02255 PF01451 Low molecular weight phosphotyrosine protein phosphatase N175_02260 PF02706 Chain length determinant protein N175_02260 PF13614 AAA domain N175_02260 PF13807 G-rich domain on putative tyrosine kinase N175_02295 PF13439 Glycosyltransferase Family 4 N175_02295 PF00534 Glycosyl transferases group 1 N175_02300 PF01370 NAD dependent epimerase/dehydratase family N175_02305 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain N175_02305 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain N175_02305 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain N175_02310 PF00953 Glycosyl transferase family 4 N175_02315 PF00753 Metallo-beta-lactamase superfamily N175_02315 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain N175_02315 PF10996 Beta-Casp domain N175_02320 PF00672 HAMP domain N175_02320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N175_02325 PF00924 Mechanosensitive ion channel N175_02330 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N175_02335 PF04222 Protein of unknown function (DUF416) N175_02340 PF04480 Protein of unknown function (DUF559) N175_02345 PF00571 CBS domain N175_02345 PF01595 Cyclin M transmembrane N-terminal domain N175_02355 PF00216 Bacterial DNA-binding protein N175_02365 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain N175_02365 PF02844 Phosphoribosylglycinamide synthetase, N domain N175_02365 PF02843 Phosphoribosylglycinamide synthetase, C domain N175_02370 PF01808 AICARFT/IMPCHase bienzyme N175_02370 PF02142 MGS-like domain N175_02380 PF13411 MerR HTH family regulatory protein N175_02385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N175_02385 PF00672 HAMP domain N175_02385 PF13426 PAS domain N175_02390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N175_02390 PF00672 HAMP domain N175_02390 PF17200 Single Cache domain 2 N175_02400 PF02954 Bacterial regulatory protein, Fis family N175_02405 PF01207 Dihydrouridine synthase (Dus) N175_02420 PF02785 Biotin carboxylase C-terminal domain N175_02420 PF00289 Biotin carboxylase, N-terminal domain N175_02420 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain N175_02425 PF00364 Biotin-requiring enzyme N175_02430 PF01220 Dehydroquinase class II N175_02435 PF16177 Acetyl-coenzyme A synthetase N-terminus N175_02435 PF00501 AMP-binding enzyme N175_02435 PF13193 AMP-binding enzyme C-terminal domain N175_02450 PF12832 MFS_1 like family N175_02455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N175_02455 PF00072 Response regulator receiver domain N175_02455 PF01627 Hpt domain N175_02455 PF00512 His Kinase A (phospho-acceptor) domain N175_02455 PF00672 HAMP domain N175_02460 PF00474 Sodium:solute symporter family N175_02470 PF02080 TrkA-C domain N175_02470 PF00999 Sodium/hydrogen exchanger family N175_02470 PF03471 Transporter associated domain N175_02475 PF00196 Bacterial regulatory proteins, luxR family N175_02475 PF00072 Response regulator receiver domain N175_02480 PF11412 Disulphide bond corrector protein DsbC N175_02480 PF02683 Cytochrome C biogenesis protein transmembrane region N175_02485 PF01316 Arginine repressor, DNA binding domain N175_02485 PF02863 Arginine repressor, C-terminal domain N175_02490 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain N175_02490 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain N175_02495 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain N175_02495 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain N175_02505 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain N175_02505 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain N175_02510 PF00696 Amino acid kinase family N175_02520 PF03606 C4-dicarboxylate anaerobic carrier N175_02525 PF03605 Anaerobic c4-dicarboxylate membrane transporter N175_02530 PF10415 Fumarase C C-terminus N175_02530 PF00206 Lyase N175_02535 PF04186 FxsA cytoplasmic membrane protein N175_02540 PF00313 'Cold-shock' DNA-binding domain N175_02545 PF00588 SpoU rRNA Methylase family N175_02550 PF16527 Two-component sensor protein CpxA, periplasmic domain N175_02550 PF00672 HAMP domain N175_02550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N175_02550 PF00512 His Kinase A (phospho-acceptor) domain N175_02555 PF00486 Transcriptional regulatory protein, C terminal N175_02555 PF00072 Response regulator receiver domain N175_02565 PF01545 Cation efflux family N175_02565 PF16916 Dimerisation domain of Zinc Transporter N175_02570 PF00365 Phosphofructokinase N175_02575 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded N175_02585 PF02219 Methylenetetrahydrofolate reductase N175_02590 PF00696 Amino acid kinase family N175_02590 PF00742 Homoserine dehydrogenase N175_02590 PF03447 Homoserine dehydrogenase, NAD binding domain N175_02595 PF01053 Cys/Met metabolism PLP-dependent enzyme N175_02600 PF01340 Met Apo-repressor, MetJ N175_02605 PF00390 Malic enzyme, N-terminal domain N175_02605 PF03949 Malic enzyme, NAD binding domain N175_02610 PF01197 Ribosomal protein L31 N175_02615 PF00270 DEAD/DEAH box helicase N175_02615 PF00271 Helicase conserved C-terminal domain N175_02615 PF17764 3′ DNA-binding domain (3′BD) N175_02615 PF18074 Primosomal protein N C-terminal domain N175_02615 PF18319 PriA DNA helicase Cys-rich region (CRR) domain N175_02620 PF00356 Bacterial regulatory proteins, lacI family N175_02630 PF00227 Proteasome subunit N175_02635 PF10431 C-terminal, D2-small domain, of ClpB protein N175_02635 PF00004 ATPase family associated with various cellular activities (AAA) N175_02635 PF07724 AAA domain (Cdc48 subfamily) N175_02640 PF01040 UbiA prenyltransferase family N175_02645 PF03737 Aldolase/RraA N175_02650 PF01554 MatE N175_02655 PF00121 Triosephosphate isomerase N175_02680 PF00166 Chaperonin 10 Kd subunit N175_02685 PF00118 TCP-1/cpn60 chaperonin family N175_02695 PF02308 MgtC family N175_02700 PF04055 Radical SAM superfamily N175_02705 PF01132 Elongation factor P (EF-P) OB domain N175_02705 PF08207 Elongation factor P (EF-P) KOW-like domain N175_02705 PF09285 Elongation factor P, C-terminal N175_02710 PF02313 Fumarate reductase subunit D N175_02715 PF02300 Fumarate reductase subunit C N175_02720 PF13183 4Fe-4S dicluster domain N175_02720 PF13085 2Fe-2S iron-sulfur cluster binding domain N175_02725 PF02910 Fumarate reductase flavoprotein C-term N175_02725 PF00890 FAD binding domain N175_02730 PF00152 tRNA synthetases class II (D, K and N) N175_02735 PF00581 Rhodanese-like domain N175_02740 PF02556 Preprotein translocase subunit SecB N175_02745 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus N175_02745 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus N175_02750 PF00132 Bacterial transferase hexapeptide (six repeats) N175_02750 PF06426 Serine acetyltransferase, N-terminal N175_02770 PF01118 Semialdehyde dehydrogenase, NAD binding domain N175_02770 PF02774 Semialdehyde dehydrogenase, dimerisation domain N175_02775 PF00696 Amino acid kinase family N175_02780 PF00583 Acetyltransferase (GNAT) family N175_02780 PF14698 Argininosuccinate lyase C-terminal N175_02780 PF00206 Lyase N175_02790 PF07992 Pyridine nucleotide-disulphide oxidoreductase N175_02790 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N175_02795 PF08534 Redoxin N175_02795 PF00462 Glutaredoxin N175_02800 PF03466 LysR substrate binding domain N175_02800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N175_02805 PF00905 Penicillin binding protein transpeptidase domain N175_02805 PF00912 Transglycosylase N175_02805 PF17092 Penicillin-binding protein OB-like domain N175_02830 PF07660 Secretin and TonB N terminus short domain N175_02830 PF11741 AMIN domain N175_02830 PF03958 Bacterial type II/III secretion system short domain N175_02830 PF00263 Bacterial type II and III secretion system protein N175_02835 PF01202 Shikimate kinase N175_02850 PF02086 D12 class N6 adenine-specific DNA methyltransferase N175_02855 PF00834 Ribulose-phosphate 3 epimerase family N175_02860 PF13419 Haloacid dehalogenase-like hydrolase N175_02865 PF00579 tRNA synthetases class I (W and Y) N175_02880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N175_02880 PF03466 LysR substrate binding domain N175_02890 PF01494 FAD binding domain N175_02900 PF00117 Glutamine amidotransferase class-I N175_02905 PF00202 Aminotransferase class-III N175_02910 PF04958 Arginine N-succinyltransferase beta subunit N175_02925 PF00027 Cyclic nucleotide-binding domain N175_02925 PF13545 Crp-like helix-turn-helix domain N175_02930 PF00485 Phosphoribulokinase / Uridine kinase family N175_02935 PF06794 Uncharacterised protein family (UPF0270) N175_02940 PF00561 alpha/beta hydrolase fold N175_02950 PF00005 ABC transporter N175_02950 PF12848 ABC transporter N175_02955 PF02525 Flavodoxin-like fold N175_02965 PF09526 Probable metal-binding protein (DUF2387) N175_02970 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N175_02975 PF01112 Asparaginase N175_02980 PF00709 Adenylosuccinate synthetase N175_02985 PF08238 Sel1 repeat N175_02990 PF08206 Ribonuclease B OB domain N175_02990 PF08461 Ribonuclease R winged-helix domain N175_02990 PF17876 Cold shock domain N175_02990 PF00575 S1 RNA binding domain N175_02990 PF00773 RNB domain N175_02995 PF08032 RNA 2'-O ribose methyltransferase substrate binding N175_02995 PF00588 SpoU rRNA Methylase family N175_03000 PF00338 Ribosomal protein S10p/S20e N175_03015 PF00276 Ribosomal protein L23 N175_03020 PF00181 Ribosomal Proteins L2, RNA binding domain N175_03020 PF03947 Ribosomal Proteins L2, C-terminal domain N175_03025 PF00203 Ribosomal protein S19 N175_03030 PF00237 Ribosomal protein L22p/L17e N175_03035 PF07650 KH domain N175_03035 PF00189 Ribosomal protein S3, C-terminal domain N175_03040 PF00252 Ribosomal protein L16p/L10e N175_03045 PF00831 Ribosomal L29 protein N175_03050 PF00366 Ribosomal protein S17 N175_03055 PF00238 Ribosomal protein L14p/L23e N175_03065 PF00281 Ribosomal protein L5 N175_03065 PF00673 ribosomal L5P family C-terminus N175_03070 PF00253 Ribosomal protein S14p/S29e N175_03075 PF00410 Ribosomal protein S8 N175_03080 PF00347 Ribosomal protein L6 N175_03085 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast N175_03095 PF00327 Ribosomal protein L30p/L7e N175_03100 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A N175_03105 PF00344 SecY translocase N175_03110 PF00444 Ribosomal protein L36 N175_03115 PF00416 Ribosomal protein S13/S18 N175_03120 PF00411 Ribosomal protein S11 N175_03125 PF01479 S4 domain N175_03125 PF00163 Ribosomal protein S4/S9 N-terminal domain N175_03135 PF01196 Ribosomal protein L17 N175_03140 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N175_03140 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase N175_03145 PF04225 Opacity-associated protein A LysM-like domain N175_03145 PF08525 Opacity-associated protein A N-terminal motif N175_03150 PF13673 Acetyltransferase (GNAT) domain N175_03155 PF03880 DbpA RNA binding domain N175_03155 PF00270 DEAD/DEAH box helicase N175_03155 PF00271 Helicase conserved C-terminal domain N175_03195 PF02872 5'-nucleotidase, C-terminal domain N175_03195 PF00149 Calcineurin-like phosphoesterase N175_03200 PF14824 Sirohaem biosynthesis protein central N175_03200 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases N175_03200 PF10414 Sirohaem synthase dimerisation region N175_03205 PF01507 Phosphoadenosine phosphosulfate reductase family N175_03210 PF00009 Elongation factor Tu GTP binding domain N175_03235 PF00005 ABC transporter N175_03250 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) N175_03255 PF01625 Peptide methionine sulfoxide reductase N175_03265 PF01103 Surface antigen N175_03265 PF07244 Surface antigen variable number repeat N175_03265 PF17243 POTRA domain TamA domain 1 N175_03270 PF04357 TamB, inner membrane protein subunit of TAM complex N175_03275 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like N175_03285 PF00719 Inorganic pyrophosphatase N175_03290 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain N175_03295 PF08245 Mur ligase middle domain N175_03295 PF02875 Mur ligase family, glutamate ligase domain N175_03295 PF01225 Mur ligase family, catalytic domain N175_03300 PF02441 Flavoprotein N175_03310 PF00528 Binding-protein-dependent transport system inner membrane component N175_03315 PF00005 ABC transporter N175_03320 PF04751 Protein of unknown function (DUF615) N175_03325 PF01523 Putative modulator of DNA gyrase N175_03330 PF03448 MgtE intracellular N domain N175_03330 PF01769 Divalent cation transporter N175_03330 PF00571 CBS domain N175_03335 PF00381 PTS HPr component phosphorylation site N175_03340 PF03668 P-loop ATPase protein family N175_03345 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N175_03350 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein N175_03355 PF04552 Sigma-54, DNA binding domain N175_03355 PF04963 Sigma-54 factor, core binding domain N175_03355 PF00309 Sigma-54 factor, Activator interacting domain (AID) N175_03360 PF00005 ABC transporter N175_03360 PF12399 Branched-chain amino acid ATP-binding cassette transporter N175_03365 PF03968 OstA-like protein N175_03380 PF00571 CBS domain N175_03380 PF01380 SIS domain N175_03385 PF01699 Sodium/calcium exchanger protein N175_03395 PF00005 ABC transporter N175_03400 PF02405 Permease MlaE N175_03405 PF02470 MlaD protein N175_03410 PF05494 MlaC protein N175_03420 PF01722 BolA-like protein N175_03425 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) N175_03430 PF01553 Acyltransferase N175_03435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N175_03435 PF00512 His Kinase A (phospho-acceptor) domain N175_03435 PF08448 PAS fold N175_03435 PF13188 PAS domain N175_03435 PF00072 Response regulator receiver domain N175_03445 PF01042 Endoribonuclease L-PSP N175_03450 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain N175_03450 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain N175_03455 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain N175_03455 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain N175_03460 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain N175_03460 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain N175_03465 PF02562 PhoH-like protein N175_03465 PF13638 PIN domain N175_03475 PF00271 Helicase conserved C-terminal domain N175_03475 PF12137 RNA polymerase recycling family C-terminal N175_03475 PF18339 RapA N-terminal Tudor like domain 1 N175_03475 PF00176 SNF2 family N-terminal domain N175_03475 PF18337 RapA N-terminal Tudor like domain N175_03485 PF00849 RNA pseudouridylate synthase N175_03490 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N175_03490 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N175_03495 PF08264 Anticodon-binding domain of tRNA N175_03495 PF00133 tRNA synthetases class I (I, L, M and V) N175_03495 PF10458 Valyl tRNA synthetase tRNA binding arm N175_03500 PF04364 DNA polymerase III chi subunit, HolC N175_03505 PF00883 Cytosol aminopeptidase family, catalytic domain N175_03505 PF02789 Cytosol aminopeptidase family, N-terminal domain N175_03510 PF03739 Lipopolysaccharide export system permease LptF/LptG N175_03515 PF03739 Lipopolysaccharide export system permease LptF/LptG N175_03615 PF00694 Aconitase C-terminal domain N175_03620 PF00330 Aconitase family (aconitate hydratase) N175_03625 PF00180 Isocitrate/isopropylmalate dehydrogenase N175_03630 PF00682 HMGL-like N175_03630 PF08502 LeuA allosteric (dimerisation) domain N175_03635 PF01569 PAP2 superfamily N175_03645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N175_03645 PF03466 LysR substrate binding domain N175_03650 PF00501 AMP-binding enzyme N175_03655 PF00205 Thiamine pyrophosphate enzyme, central domain N175_03655 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N175_03655 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N175_03660 PF10369 Small subunit of acetolactate synthase N175_03665 PF01842 ACT domain N175_03665 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N175_03665 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N175_03670 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) N175_03675 PF01812 5-formyltetrahydrofolate cyclo-ligase family N175_03680 PF05164 Cell division protein ZapA N175_03690 PF01494 FAD binding domain N175_03695 PF01494 FAD binding domain N175_03715 PF03937 Flavinator of succinate dehydrogenase N175_03725 PF02910 Fumarate reductase flavoprotein C-term N175_03725 PF00890 FAD binding domain N175_03730 PF08281 Sigma-70, region 4 N175_03730 PF04542 Sigma-70 region 2 N175_03735 PF03872 Anti sigma-E protein RseA, N-terminal domain N175_03735 PF03873 Anti sigma-E protein RseA, C-terminal domain N175_03740 PF17188 MucB/RseB C-terminal domain N175_03740 PF03888 MucB/RseB N-terminal domain N175_03750 PF00679 Elongation factor G C-terminus N175_03750 PF00009 Elongation factor Tu GTP binding domain N175_03750 PF03144 Elongation factor Tu domain 2 N175_03750 PF06421 GTP-binding protein LepA C-terminus N175_03755 PF10502 Signal peptidase, peptidase S26 N175_03765 PF07650 KH domain N175_03765 PF01926 50S ribosome-binding GTPase N175_03775 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ N175_03780 PF01648 4'-phosphopantetheinyl transferase superfamily N175_03785 PF00672 HAMP domain N175_03785 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) N175_03785 PF00072 Response regulator receiver domain N175_03785 PF01627 Hpt domain N175_03785 PF00512 His Kinase A (phospho-acceptor) domain N175_03785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N175_03790 PF05958 tRNA (Uracil-5-)-methyltransferase N175_03790 PF01938 TRAM domain N175_03795 PF04607 Region found in RelA / SpoT proteins N175_03795 PF02824 TGS domain N175_03795 PF13291 ACT domain N175_03800 PF03819 MazG nucleotide pyrophosphohydrolase domain N175_03805 PF00117 Glutamine amidotransferase class-I N175_03805 PF06418 CTP synthase N-terminus N175_03810 PF00113 Enolase, C-terminal TIM barrel domain N175_03810 PF03952 Enolase, N-terminal domain N175_03815 PF12627 Probable RNA and SrmB- binding site of polymerase A N175_03815 PF01966 HD domain N175_03815 PF01743 Poly A polymerase head domain N175_03820 PF01471 Putative peptidoglycan binding domain N175_03820 PF13401 AAA domain N175_03830 PF08239 Bacterial SH3 domain N175_03835 PF01384 Phosphate transporter family N175_03840 PF01865 Protein of unknown function DUF47 N175_03850 PF01928 CYTH domain N175_03860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N175_03860 PF00672 HAMP domain N175_03865 PF08335 GlnD PII-uridylyltransferase N175_03865 PF03710 Glutamate-ammonia ligase adenylyltransferase N175_03870 PF08335 GlnD PII-uridylyltransferase N175_03870 PF03710 Glutamate-ammonia ligase adenylyltransferase N175_03875 PF00294 pfkB family carbohydrate kinase N175_03875 PF01467 Cytidylyltransferase-like N175_03880 PF02321 Outer membrane efflux protein N175_03885 PF00293 NUDIX domain N175_03890 PF06853 Protein of unknown function (DUF1249) N175_03895 PF00149 Calcineurin-like phosphoesterase N175_03900 PF05728 Uncharacterised protein family (UPF0227) N175_03905 PF00204 DNA gyrase B N175_03905 PF00986 DNA gyrase B subunit, carboxyl terminus N175_03905 PF01751 Toprim domain N175_03905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N175_03910 PF00521 DNA gyrase/topoisomerase IV, subunit A N175_03910 PF03989 DNA gyrase C-terminal domain, beta-propeller N175_03915 PF13180 PDZ domain N175_03920 PF00595 PDZ domain N175_03925 PF06295 Protein of unknown function (DUF1043) N175_03930 PF03969 AFG1-like ATPase N175_03940 PF00572 Ribosomal protein L13 N175_03945 PF00380 Ribosomal protein S9/S16 N175_03950 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal N175_03950 PF00355 Rieske [2Fe-2S] domain N175_03955 PF00032 Cytochrome b(C-terminal)/b6/petD N175_03955 PF00033 Cytochrome b/b6/petB N175_03960 PF02167 Cytochrome C1 family N175_03965 PF00043 Glutathione S-transferase, C-terminal domain N175_03965 PF02798 Glutathione S-transferase, N-terminal domain N175_03970 PF04386 Stringent starvation protein B N175_03975 PF04972 BON domain N175_03980 PF13580 SIS domain N175_03985 PF02021 Uncharacterised protein family UPF0102 N175_03990 PF04348 LppC putative lipoprotein N175_03995 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases N175_04005 PF01795 MraW methylase family N175_04010 PF04999 Cell division protein FtsL N175_04015 PF00905 Penicillin binding protein transpeptidase domain N175_04015 PF03717 Penicillin-binding Protein dimerisation domain N175_04020 PF01225 Mur ligase family, catalytic domain N175_04020 PF02875 Mur ligase family, glutamate ligase domain N175_04020 PF08245 Mur ligase middle domain N175_04025 PF08245 Mur ligase middle domain N175_04025 PF02875 Mur ligase family, glutamate ligase domain N175_04025 PF01225 Mur ligase family, catalytic domain N175_04030 PF00953 Glycosyl transferase family 4 N175_04030 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 N175_04035 PF02875 Mur ligase family, glutamate ligase domain N175_04035 PF08245 Mur ligase middle domain N175_04040 PF01098 Cell cycle protein N175_04045 PF04101 Glycosyltransferase family 28 C-terminal domain N175_04045 PF03033 Glycosyltransferase family 28 N-terminal domain N175_04050 PF01225 Mur ligase family, catalytic domain N175_04050 PF02875 Mur ligase family, glutamate ligase domain N175_04050 PF08245 Mur ligase middle domain N175_04055 PF03799 Cell division protein FtsQ N175_04055 PF08478 POTRA domain, FtsQ-type N175_04060 PF02491 SHS2 domain inserted in FTSA N175_04065 PF00091 Tubulin/FtsZ family, GTPase domain N175_04065 PF12327 FtsZ family, C-terminal domain N175_04070 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase N175_04080 PF07517 SecA DEAD-like domain N175_04080 PF02810 SEC-C motif N175_04080 PF07516 SecA Wing and Scaffold domain N175_04080 PF01043 SecA preprotein cross-linking domain N175_04085 PF00293 NUDIX domain N175_04100 PF00117 Glutamine amidotransferase class-I N175_04100 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain N175_04105 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain N175_04105 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain N175_04105 PF02142 MGS-like domain N175_04110 PF01925 Sulfite exporter TauE/SafE N175_04115 PF03466 LysR substrate binding domain N175_04115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N175_04120 PF03458 UPF0126 domain N175_04125 PF01497 Periplasmic binding protein N175_04150 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster N175_04150 PF07992 Pyridine nucleotide-disulphide oxidoreductase N175_04155 PF01645 Conserved region in glutamate synthase N175_04155 PF01493 GXGXG motif N175_04155 PF04898 Glutamate synthase central domain N175_04155 PF00310 Glutamine amidotransferases class-II N175_04160 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster N175_04160 PF07992 Pyridine nucleotide-disulphide oxidoreductase N175_04165 PF01645 Conserved region in glutamate synthase N175_04165 PF04898 Glutamate synthase central domain N175_04165 PF01493 GXGXG motif N175_04165 PF00310 Glutamine amidotransferases class-II N175_04170 PF04055 Radical SAM superfamily N175_04170 PF16199 Radical_SAM C-terminal domain N175_04175 PF18415 Histidine kinase receptor ArcB trans-membrane domain N175_04175 PF01627 Hpt domain N175_04175 PF00989 PAS fold N175_04175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N175_04175 PF00072 Response regulator receiver domain N175_04175 PF00512 His Kinase A (phospho-acceptor) domain N175_04185 PF00072 Response regulator receiver domain N175_04185 PF00486 Transcriptional regulatory protein, C terminal N175_04190 PF03737 Aldolase/RraA N175_04200 PF00742 Homoserine dehydrogenase N175_04200 PF01842 ACT domain N175_04200 PF13840 ACT domain N175_04200 PF03447 Homoserine dehydrogenase, NAD binding domain N175_04200 PF00696 Amino acid kinase family N175_04205 PF08544 GHMP kinases C terminal N175_04205 PF00288 GHMP kinases N terminal domain N175_04210 PF00291 Pyridoxal-phosphate dependent enzyme N175_04210 PF14821 Threonine synthase N terminus N175_04215 PF01228 Glycine radical N175_04220 PF01261 Xylose isomerase-like TIM barrel N175_04225 PF03167 Uracil DNA glycosylase superfamily N175_04240 PF01235 Sodium:alanine symporter family N175_04250 PF03883 Peroxide stress protein YaaA N175_04260 PF01026 TatD related DNase N175_04265 PF01773 Na+ dependent nucleoside transporter N-terminus N175_04265 PF07662 Na+ dependent nucleoside transporter C-terminus N175_04265 PF07670 Nucleoside recognition N175_04270 PF01791 DeoC/LacD family aldolase N175_04275 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain N175_04275 PF00591 Glycosyl transferase family, a/b domain N175_04275 PF02885 Glycosyl transferase family, helical bundle domain N175_04280 PF01676 Metalloenzyme superfamily N175_04285 PF01048 Phosphorylase superfamily N175_04295 PF18429 Domain of unknown function (DUF5609) N175_04305 PF18073 Rubredoxin metal binding domain N175_04310 PF00679 Elongation factor G C-terminus N175_04310 PF14492 Elongation Factor G, domain II N175_04310 PF03764 Elongation factor G, domain IV N175_04310 PF00009 Elongation factor Tu GTP binding domain N175_04310 PF03144 Elongation factor Tu domain 2 N175_04315 PF09905 DNA-binding protein VF530 N175_04320 PF00501 AMP-binding enzyme N175_04325 PF11849 Domain of unknown function (DUF3369) N175_04335 PF01554 MatE N175_04345 PF16363 GDP-mannose 4,6 dehydratase N175_04350 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain N175_04350 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain N175_04355 PF00288 GHMP kinases N terminal domain N175_04355 PF10509 Galactokinase galactose-binding signature N175_04355 PF08544 GHMP kinases C terminal N175_04360 PF01263 Aldose 1-epimerase N175_04365 PF00356 Bacterial regulatory proteins, lacI family N175_04375 PF01544 CorA-like Mg2+ transporter protein N175_04385 PF00583 Acetyltransferase (GNAT) family N175_04395 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle N175_04395 PF14602 Hexapeptide repeat of succinyl-transferase N175_04400 PF07130 YebG protein N175_04415 PF17946 RecC C-terminal domain N175_04420 PF00580 UvrD/REP helicase N-terminal domain N175_04420 PF12705 PD-(D/E)XK nuclease superfamily N175_04420 PF13361 UvrD-like helicase C-terminal domain N175_04425 PF13538 UvrD-like helicase C-terminal domain N175_04435 PF00696 Amino acid kinase family N175_04435 PF00583 Acetyltransferase (GNAT) family N175_04445 PF03562 MltA specific insert domain N175_04445 PF06725 3D domain N175_04450 PF00899 ThiF family N175_04455 PF02657 Fe-S metabolism associated domain N175_04460 PF00266 Aminotransferase class-V N175_04465 PF01965 DJ-1/PfpI family N175_04470 PF08546 Ketopantoate reductase PanE/ApbA C terminal N175_04470 PF02558 Ketopantoate reductase PanE/ApbA N175_04475 PF03502 Nucleoside-specific channel-forming protein, Tsx N175_04485 PF04542 Sigma-70 region 2 N175_04485 PF04545 Sigma-70, region 4 N175_04495 PF07690 Major Facilitator Superfamily N175_04500 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD N175_04510 PF05175 Methyltransferase small domain N175_04515 PF01722 BolA-like protein N175_04520 PF11973 NQRA C-terminal domain N175_04520 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) N175_04525 PF03116 NQR2, RnfD, RnfE family N175_04530 PF04205 FMN-binding domain N175_04535 PF02508 Rnf-Nqr subunit, membrane protein N175_04540 PF02508 Rnf-Nqr subunit, membrane protein N175_04545 PF00175 Oxidoreductase NAD-binding domain N175_04545 PF00111 2Fe-2S iron-sulfur cluster binding domain N175_04545 PF00970 Oxidoreductase FAD-binding domain N175_04550 PF02424 ApbE family N175_04560 PF11798 IMS family HHH motif N175_04560 PF00817 impB/mucB/samB family N175_04560 PF11799 impB/mucB/samB family C-terminal domain N175_04575 PF01590 GAF domain N175_04575 PF00360 Phytochrome region N175_04575 PF00990 Diguanylate cyclase, GGDEF domain N175_04575 PF00563 EAL domain N175_04580 PF00209 Sodium:neurotransmitter symporter family N175_04590 PF18030 RimK PreATP-grasp domain N175_04590 PF08443 RimK-like ATP-grasp domain N175_04595 PF08443 RimK-like ATP-grasp domain N175_04595 PF18030 RimK PreATP-grasp domain N175_04600 PF01546 Peptidase family M20/M25/M40 N175_04600 PF07687 Peptidase dimerisation domain N175_04610 PF00860 Permease family N175_04625 PF07417 Sigma factor-binding transcriptional regulator Crl N175_04630 PF00696 Amino acid kinase family N175_04630 PF01472 PUA domain N175_04635 PF00171 Aldehyde dehydrogenase family N175_04640 PF03477 ATP cone domain N175_04645 PF01872 RibD C-terminal domain N175_04645 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region N175_04650 PF00677 Lumazine binding domain N175_04655 PF00925 GTP cyclohydrolase II N175_04655 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase N175_04660 PF00885 6,7-dimethyl-8-ribityllumazine synthase N175_04670 PF02769 AIR synthase related protein, C-terminal domain N175_04670 PF00586 AIR synthase related protein, N-terminal domain N175_04675 PF04608 Phosphatidylglycerophosphatase A N175_04680 PF11944 Protein of unknown function (DUF3461) N175_04690 PF00557 Metallopeptidase family M24 N175_04695 PF00318 Ribosomal protein S2 N175_04700 PF00889 Elongation factor TS N175_04705 PF00696 Amino acid kinase family N175_04710 PF01765 Ribosome recycling factor N175_04715 PF01255 Putative undecaprenyl diphosphate synthase N175_04725 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain N175_04725 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase N175_04725 PF13288 DXP reductoisomerase C-terminal domain N175_04730 PF02163 Peptidase family M50 N175_04730 PF17820 PDZ domain N175_04735 PF07244 Surface antigen variable number repeat N175_04735 PF01103 Surface antigen N175_04740 PF03938 Outer membrane protein (OmpH-like) N175_04745 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD N175_04745 PF00132 Bacterial transferase hexapeptide (six repeats) N175_04750 PF07977 FabA-like domain N175_04755 PF00132 Bacterial transferase hexapeptide (six repeats) N175_04755 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 N175_04760 PF02684 Lipid-A-disaccharide synthetase N175_04765 PF01351 Ribonuclease HII N175_04770 PF01336 OB-fold nucleic acid binding domain N175_04770 PF02811 PHP domain N175_04770 PF07733 Bacterial DNA polymerase III alpha NTPase domain N175_04770 PF14579 Helix-hairpin-helix motif N175_04770 PF17657 Bacterial DNA polymerase III alpha subunit finger domain N175_04775 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit N175_04780 PF11734 TilS substrate C-terminal domain N175_04780 PF09179 TilS substrate binding domain N175_04780 PF01171 PP-loop family N175_04785 PF00034 Cytochrome c N175_04795 PF00543 Nitrogen regulatory protein P-II N175_04800 PF03372 Endonuclease/Exonuclease/phosphatase family N175_04810 PF01476 LysM domain N175_04810 PF01464 Transglycosylase SLT domain N175_04815 PF00753 Metallo-beta-lactamase superfamily N175_04815 PF16123 Hydroxyacylglutathione hydrolase C-terminus N175_04820 PF08241 Methyltransferase domain N175_04825 PF00075 RNase H N175_04830 PF00929 Exonuclease N175_04840 PF02770 Acyl-CoA dehydrogenase, middle domain N175_04840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N175_04840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N175_04840 PF09317 Domain of unknown function (DUF1974) N175_04845 PF13580 SIS domain N175_04850 PF13230 Glutamine amidotransferases class-II N175_04855 PF00551 Formyl transferase N175_04860 PF00586 AIR synthase related protein, N-terminal domain N175_04860 PF02769 AIR synthase related protein, C-terminal domain N175_04870 PF01479 S4 domain N175_04870 PF00849 RNA pseudouridylate synthase N175_04890 PF00728 Glycosyl hydrolase family 20, catalytic domain N175_04890 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain N175_04890 PF03173 Putative carbohydrate binding domain N175_04890 PF02838 Glycosyl hydrolase family 20, domain 2 N175_04900 PF00403 Heavy-metal-associated domain N175_04905 PF00749 tRNA synthetases class I (E and Q), catalytic domain N175_04910 PF01389 OmpA-like transmembrane domain N175_04910 PF00691 OmpA family N175_04945 PF04316 Anti-sigma-28 factor, FlgM N175_04955 PF00072 Response regulator receiver domain N175_04955 PF01584 CheW-like domain N175_04960 PF03705 CheR methyltransferase, all-alpha domain N175_04960 PF01739 CheR methyltransferase, SAM binding domain N175_04965 PF00460 Flagella basal body rod protein N175_04970 PF00460 Flagella basal body rod protein N175_04970 PF06429 Flagellar basal body rod FlgEFG protein C-terminal N175_04975 PF13860 FlgD Ig-like domain N175_04975 PF13861 FlgD Tudor-like domain N175_04975 PF03963 Flagellar hook capping protein - N-terminal region N175_04985 PF07559 Flagellar basal body protein FlaE N175_04985 PF06429 Flagellar basal body rod FlgEFG protein C-terminal N175_04985 PF00460 Flagella basal body rod protein N175_04990 PF06429 Flagellar basal body rod FlgEFG protein C-terminal N175_04990 PF00460 Flagella basal body rod protein N175_04995 PF06429 Flagellar basal body rod FlgEFG protein C-terminal N175_04995 PF00460 Flagella basal body rod protein N175_05000 PF02107 Flagellar L-ring protein N175_05005 PF02119 Flagellar P-ring protein N175_05010 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase N175_05010 PF10135 Rod binding protein N175_05015 PF06429 Flagellar basal body rod FlgEFG protein C-terminal N175_05015 PF07196 Flagellin hook IN motif N175_05020 PF00669 Bacterial flagellin N-terminal helical region N175_05025 PF00669 Bacterial flagellin N-terminal helical region N175_05025 PF07196 Flagellin hook IN motif N175_05025 PF00700 Bacterial flagellin C-terminal helical region N175_05030 PF00669 Bacterial flagellin N-terminal helical region N175_05030 PF07196 Flagellin hook IN motif N175_05030 PF00700 Bacterial flagellin C-terminal helical region N175_05105 PF01926 50S ribosome-binding GTPase N175_05105 PF06071 Protein of unknown function (DUF933) N175_05110 PF01195 Peptidyl-tRNA hydrolase N175_05115 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase N175_05115 PF14572 Phosphoribosyl synthetase-associated domain N175_05120 PF00288 GHMP kinases N terminal domain N175_05120 PF08544 GHMP kinases C terminal N175_05125 PF03550 Outer membrane lipoprotein LolB N175_05130 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain N175_05130 PF01488 Shikimate / quinate 5-dehydrogenase N175_05130 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain N175_05135 PF03462 PCRF domain N175_05135 PF00472 RF-1 domain N175_05140 PF17827 PrmC N-terminal domain N175_05140 PF13847 Methyltransferase domain N175_05145 PF04247 Invasion gene expression up-regulator, SirB N175_05150 PF13369 Transglutaminase-like superfamily N175_05155 PF00793 DAHP synthetase I family N175_05160 PF00149 Calcineurin-like phosphoesterase N175_05160 PF02872 5'-nucleotidase, C-terminal domain N175_05165 PF04073 Aminoacyl-tRNA editing domain N175_05170 PF00860 Permease family N175_05185 PF03358 NADPH-dependent FMN reductase N175_05190 PF03960 ArsC family N175_05195 PF01435 Peptidase family M48 N175_05195 PF13181 Tetratricopeptide repeat N175_05205 PF01594 AI-2E family transporter N175_05210 PF02743 Cache domain N175_05210 PF00672 HAMP domain N175_05210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N175_05215 PF00578 AhpC/TSA family N175_05225 PF00701 Dihydrodipicolinate synthetase family N175_05245 PF07687 Peptidase dimerisation domain N175_05245 PF01546 Peptidase family M20/M25/M40 N175_05250 PF03960 ArsC family N175_05270 PF11143 Protein of unknown function (DUF2919) N175_05275 PF04261 Dyp-type peroxidase family N175_05280 PF00700 Bacterial flagellin C-terminal helical region N175_05280 PF07196 Flagellin hook IN motif N175_05280 PF00669 Bacterial flagellin N-terminal helical region N175_05285 PF00700 Bacterial flagellin C-terminal helical region N175_05285 PF00669 Bacterial flagellin N-terminal helical region N175_05285 PF07196 Flagellin hook IN motif N175_05290 PF00700 Bacterial flagellin C-terminal helical region N175_05290 PF07196 Flagellin hook IN motif N175_05290 PF00669 Bacterial flagellin N-terminal helical region N175_05295 PF03646 FlaG protein N175_05300 PF02465 Flagellar hook-associated protein 2 N-terminus N175_05300 PF07196 Flagellin hook IN motif N175_05300 PF07195 Flagellar hook-associated protein 2 C-terminus N175_05310 PF02561 Flagellar protein FliS N175_05315 PF02954 Bacterial regulatory protein, Fis family N175_05315 PF00072 Response regulator receiver domain N175_05315 PF00158 Sigma-54 interaction domain N175_05320 PF00512 His Kinase A (phospho-acceptor) domain N175_05320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N175_05325 PF00072 Response regulator receiver domain N175_05325 PF00158 Sigma-54 interaction domain N175_05325 PF02954 Bacterial regulatory protein, Fis family N175_05330 PF02049 Flagellar hook-basal body complex protein FliE N175_05335 PF01514 Secretory protein of YscJ/FliF family N175_05335 PF08345 Flagellar M-ring protein C-terminal N175_05340 PF01706 FliG C-terminal domain N175_05340 PF14841 FliG middle domain N175_05340 PF14842 FliG N-terminal domain N175_05350 PF18269 T3SS EscN ATPase C-terminal domain N175_05350 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N175_05370 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term N175_05370 PF02154 Flagellar motor switch protein FliM N175_05375 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term N175_05380 PF04347 Flagellar biosynthesis protein, FliO N175_05385 PF00813 FliP family N175_05390 PF01313 Bacterial export proteins, family 3 N175_05395 PF01311 Bacterial export proteins, family 1 N175_05400 PF01312 FlhB HrpN YscU SpaS Family N175_05405 PF01713 Smr domain N175_05410 PF05175 Methyltransferase small domain N175_05415 PF01264 Chorismate synthase N175_05420 PF03458 UPF0126 domain N175_05425 PF04315 Elongation factor P hydroxylase N175_05430 PF08891 YfcL protein N175_05435 PF03358 NADPH-dependent FMN reductase N175_05440 PF01266 FAD dependent oxidoreductase N175_05440 PF05430 S-adenosyl-L-methionine-dependent methyltransferase N175_05445 PF00109 Beta-ketoacyl synthase, N-terminal domain N175_05445 PF02801 Beta-ketoacyl synthase, C-terminal domain N175_05450 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N175_05450 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N175_05450 PF11890 Domain of unknown function (DUF3410) N175_05455 PF01118 Semialdehyde dehydrogenase, NAD binding domain N175_05455 PF02774 Semialdehyde dehydrogenase, dimerisation domain N175_05460 PF01475 Ferric uptake regulator family N175_05470 PF03466 LysR substrate binding domain N175_05470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N175_05475 PF03788 LrgA family N175_05480 PF04172 LrgB-like family N175_05485 PF00258 Flavodoxin N175_05495 PF12697 Alpha/beta hydrolase family N175_05500 PF17206 SeqA protein N-terminal domain N175_05500 PF03925 SeqA protein C-terminal domain N175_05505 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N175_05505 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N175_05505 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N175_05505 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N175_05515 PF01784 NIF3 (NGG1p interacting factor 3) N175_05520 PF00285 Citrate synthase, C-terminal domain N175_05525 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit N175_05530 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit N175_05535 PF02910 Fumarate reductase flavoprotein C-term N175_05535 PF00890 FAD binding domain N175_05540 PF13085 2Fe-2S iron-sulfur cluster binding domain N175_05545 PF02779 Transketolase, pyrimidine binding domain N175_05545 PF00676 Dehydrogenase E1 component N175_05545 PF16870 2-oxoglutarate dehydrogenase C-terminal N175_05545 PF16078 2-oxoglutarate dehydrogenase N-terminus N175_05550 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) N175_05550 PF00364 Biotin-requiring enzyme N175_05550 PF02817 e3 binding domain N175_05555 PF00549 CoA-ligase N175_05555 PF08442 ATP-grasp domain N175_05560 PF02629 CoA binding domain N175_05560 PF00549 CoA-ligase N175_05565 PF00950 ABC 3 transport family N175_05570 PF00005 ABC transporter N175_05575 PF01297 Zinc-uptake complex component A periplasmic N175_05580 PF02311 AraC-like ligand binding domain N175_05580 PF12833 Helix-turn-helix domain N175_05585 PF04023 FeoA domain N175_05590 PF02421 Ferrous iron transport protein B N175_05590 PF07664 Ferrous iron transport protein B C terminus N175_05590 PF07670 Nucleoside recognition N175_05605 PF05746 DALR anticodon binding domain N175_05605 PF03485 Arginyl tRNA synthetase N terminal domain N175_05605 PF00750 tRNA synthetases class I (R) N175_05610 PF06185 YecM protein N175_05615 PF00675 Insulinase (Peptidase family M16) N175_05615 PF05193 Peptidase M16 inactive domain N175_05620 PF00300 Histidine phosphatase superfamily (branch 1) N175_05625 PF00771 FHIPEP family N175_05630 PF00448 SRP54-type protein, GTPase domain N175_05635 PF10609 NUBPL iron-transfer P-loop NTPase N175_05640 PF04542 Sigma-70 region 2 N175_05640 PF04539 Sigma-70 region 3 N175_05640 PF04545 Sigma-70, region 4 N175_05645 PF00072 Response regulator receiver domain N175_05650 PF04344 Chemotaxis phosphatase, CheZ N175_05655 PF07194 P2 response regulator binding domain N175_05655 PF01584 CheW-like domain N175_05655 PF01627 Hpt domain N175_05655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N175_05655 PF02895 Signal transducing histidine kinase, homodimeric domain N175_05660 PF01339 CheB methylesterase N175_05660 PF00072 Response regulator receiver domain N175_05665 PF13614 AAA domain N175_05675 PF01584 CheW-like domain N175_05685 PF00005 ABC transporter N175_05690 PF03379 CcmB protein N175_05695 PF01578 Cytochrome C assembly protein N175_05705 PF03100 CcmE N175_05710 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal N175_05710 PF01578 Cytochrome C assembly protein N175_05715 PF08534 Redoxin N175_05720 PF03918 Cytochrome C biogenesis protein N175_05730 PF04333 MlaA lipoprotein N175_05745 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain N175_05745 PF02777 Iron/manganese superoxide dismutases, C-terminal domain N175_05750 PF00462 Glutaredoxin N175_05755 PF01751 Toprim domain N175_05755 PF01131 DNA topoisomerase N175_05780 PF02634 FdhD/NarQ family N175_05785 PF00384 Molybdopterin oxidoreductase N175_05795 PF11893 Domain of unknown function (DUF3413) N175_05795 PF00884 Sulfatase N175_05800 PF07208 Protein of unknown function (DUF1414) N175_05805 PF04245 37-kD nucleoid-associated bacterial protein N175_05815 PF03553 Na+/H+ antiporter family N175_05820 PF02774 Semialdehyde dehydrogenase, dimerisation domain N175_05820 PF01118 Semialdehyde dehydrogenase, NAD binding domain N175_05825 PF01914 MarC family integral membrane protein N175_05830 PF00465 Iron-containing alcohol dehydrogenase N175_05830 PF00171 Aldehyde dehydrogenase family N175_05840 PF00575 S1 RNA binding domain N175_05840 PF10150 Ribonuclease E/G family N175_05840 PF12111 Polyribonucleotide phosphorylase C terminal N175_05845 PF01479 S4 domain N175_05845 PF00849 RNA pseudouridylate synthase N175_05850 PF02545 Maf-like protein N175_05855 PF02620 Large ribosomal RNA subunit accumulation protein YceD N175_05860 PF01783 Ribosomal L32p protein family N175_05865 PF02504 Fatty acid synthesis protein N175_05870 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III N175_05870 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal N175_05875 PF00698 Acyl transferase domain N175_05885 PF00550 Phosphopantetheine attachment site N175_05890 PF00109 Beta-ketoacyl synthase, N-terminal domain N175_05890 PF02801 Beta-ketoacyl synthase, C-terminal domain N175_05895 PF01063 Amino-transferase class IV N175_05900 PF02618 YceG-like family N175_05905 PF02223 Thymidylate kinase N175_05910 PF09115 DNA polymerase III, delta subunit, C terminal N175_05915 PF01026 TatD related DNase N175_05920 PF00367 phosphotransferase system, EIIB N175_05920 PF02378 Phosphotransferase system, EIIC N175_05930 PF00209 Sodium:neurotransmitter symporter family N175_05945 PF01734 Patatin-like phospholipase N175_05950 PF00224 Pyruvate kinase, barrel domain N175_05950 PF02887 Pyruvate kinase, alpha/beta domain N175_05955 PF00480 ROK family N175_05960 PF00072 Response regulator receiver domain N175_05960 PF01584 CheW-like domain N175_05965 PF00106 short chain dehydrogenase N175_05970 PF08496 Peptidase family S49 N-terminal N175_05970 PF01343 Peptidase family S49 N175_05985 PF13286 Phosphohydrolase-associated domain N175_05985 PF01966 HD domain N175_05995 PF00155 Aminotransferase class I and II N175_06000 PF00425 chorismate binding enzyme N175_06005 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N175_06005 PF16582 Middle domain of thiamine pyrophosphate N175_06005 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N175_06010 PF12697 Alpha/beta hydrolase family N175_06015 PF00378 Enoyl-CoA hydratase/isomerase N175_06020 PF13378 Enolase C-terminal domain-like N175_06025 PF13193 AMP-binding enzyme C-terminal domain N175_06025 PF00501 AMP-binding enzyme N175_06045 PF07690 Major Facilitator Superfamily N175_06060 PF00291 Pyridoxal-phosphate dependent enzyme N175_06065 PF01037 Lrp/AsnC ligand binding domain N175_06065 PF13404 AsnC-type helix-turn-helix domain N175_06080 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain N175_06090 PF00990 Diguanylate cyclase, GGDEF domain N175_06095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N175_06095 PF03466 LysR substrate binding domain N175_06110 PF00501 AMP-binding enzyme N175_06120 PF00106 short chain dehydrogenase N175_06130 PF00072 Response regulator receiver domain N175_06130 PF00486 Transcriptional regulatory protein, C terminal N175_06135 PF00512 His Kinase A (phospho-acceptor) domain N175_06135 PF08521 Two-component sensor kinase N-terminal N175_06135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N175_06140 PF08019 Phosphoethanolamine transferase EptA/EptB N175_06140 PF00884 Sulfatase N175_06145 PF01037 Lrp/AsnC ligand binding domain N175_06150 PF01810 LysE type translocator N175_06155 PF06826 Predicted Permease Membrane Region N175_06155 PF02080 TrkA-C domain N175_06160 PF00072 Response regulator receiver domain N175_06160 PF00486 Transcriptional regulatory protein, C terminal N175_06165 PF00512 His Kinase A (phospho-acceptor) domain N175_06165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N175_06165 PF00672 HAMP domain N175_06180 PF00356 Bacterial regulatory proteins, lacI family N175_06180 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family N175_06185 PF00920 Dehydratase family N175_06190 PF01202 Shikimate kinase N175_06195 PF02447 GntP family permease N175_06200 PF01081 KDPG and KHG aldolase N175_06215 PF06629 MltA-interacting protein MipA N175_06220 PF02801 Beta-ketoacyl synthase, C-terminal domain N175_06220 PF00109 Beta-ketoacyl synthase, N-terminal domain N175_06230 PF07977 FabA-like domain N175_06235 PF00109 Beta-ketoacyl synthase, N-terminal domain N175_06235 PF02801 Beta-ketoacyl synthase, C-terminal domain N175_06260 PF00221 Aromatic amino acid lyase N175_06265 PF00535 Glycosyl transferase family 2 N175_06275 PF00501 AMP-binding enzyme N175_06275 PF13193 AMP-binding enzyme C-terminal domain N175_06285 PF00550 Phosphopantetheine attachment site N175_06290 PF00550 Phosphopantetheine attachment site N175_06310 PF04820 Tryptophan halogenase N175_06315 PF00072 Response regulator receiver domain N175_06315 PF09308 LuxQ, periplasmic N175_06315 PF00512 His Kinase A (phospho-acceptor) domain N175_06315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N175_06320 PF00990 Diguanylate cyclase, GGDEF domain N175_06320 PF03707 Bacterial signalling protein N terminal repeat N175_06320 PF00563 EAL domain N175_06325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N175_06330 PF00528 Binding-protein-dependent transport system inner membrane component N175_06335 PF00528 Binding-protein-dependent transport system inner membrane component N175_06335 PF12911 N-terminal TM domain of oligopeptide transport permease C N175_06340 PF00005 ABC transporter N175_06340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N175_06345 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N175_06345 PF00005 ABC transporter N175_06350 PF13409 Glutathione S-transferase, N-terminal domain N175_06355 PF01515 Phosphate acetyl/butaryl transferase N175_06355 PF07085 DRTGG domain N175_06360 PF00871 Acetokinase family N175_06365 PF04217 Protein of unknown function, DUF412 N175_06375 PF02653 Branched-chain amino acid transport system / permease component N175_06380 PF00005 ABC transporter N175_06385 PF01207 Dihydrouridine synthase (Dus) N175_06390 PF02810 SEC-C motif N175_06390 PF01043 SecA preprotein cross-linking domain N175_06390 PF07517 SecA DEAD-like domain N175_06390 PF07516 SecA Wing and Scaffold domain N175_06395 PF03548 Outer membrane lipoprotein carrier protein LolA N175_06400 PF00004 ATPase family associated with various cellular activities (AAA) N175_06400 PF16193 AAA C-terminal domain N175_06400 PF12002 MgsA AAA+ ATPase C terminal N175_06405 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) N175_06405 PF02403 Seryl-tRNA synthetase N-terminal domain N175_06410 PF00202 Aminotransferase class-III N175_06415 PF06968 Biotin and Thiamin Synthesis associated domain N175_06415 PF04055 Radical SAM superfamily N175_06420 PF00155 Aminotransferase class I and II N175_06425 PF08241 Methyltransferase domain N175_06435 PF02600 Disulfide bond formation protein DsbB N175_06440 PF06450 Bacterial Na+/H+ antiporter B (NhaB) N175_06445 PF00392 Bacterial regulatory proteins, gntR family N175_06445 PF07840 FadR C-terminal domain N175_06455 PF00672 HAMP domain N175_06455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N175_06460 PF01230 HIT domain N175_06475 PF13036 Peptidoglycan-synthase activator LpoB N175_06475 PF08139 Prokaryotic membrane lipoprotein lipid attachment site N175_06490 PF07992 Pyridine nucleotide-disulphide oxidoreductase N175_06495 PF12563 Hemolytic toxin N terminal N175_06495 PF16458 Beta-prism lectin N175_06495 PF07968 Leukocidin/Hemolysin toxin family N175_06505 PF02559 CarD-like/TRCF domain N175_06505 PF03461 TRCF domain N175_06505 PF17757 UvrB interaction domain N175_06505 PF00271 Helicase conserved C-terminal domain N175_06505 PF00270 DEAD/DEAH box helicase N175_06515 PF12704 MacB-like periplasmic core domain N175_06515 PF02687 FtsX-like permease family N175_06520 PF00005 ABC transporter N175_06525 PF12704 MacB-like periplasmic core domain N175_06525 PF02687 FtsX-like permease family N175_06535 PF00753 Metallo-beta-lactamase superfamily N175_06535 PF13567 Domain of unknown function (DUF4131) N175_06535 PF03772 Competence protein N175_06540 PF00664 ABC transporter transmembrane region N175_06540 PF00005 ABC transporter N175_06545 PF02606 Tetraacyldisaccharide-1-P 4'-kinase N175_06550 PF03966 Trm112p-like protein N175_06555 PF02348 Cytidylyltransferase N175_06565 PF04293 SpoVR like protein N175_06570 PF04285 Protein of unknown function (DUF444) N175_06575 PF08298 PrkA AAA domain N175_06575 PF06798 PrkA serine protein kinase C-terminal domain N175_06590 PF04055 Radical SAM superfamily N175_06595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N175_06595 PF00672 HAMP domain N175_06605 PF02901 Pyruvate formate lyase-like N175_06605 PF01228 Glycine radical N175_06620 PF00005 ABC transporter N175_06625 PF00497 Bacterial extracellular solute-binding proteins, family 3 N175_06630 PF00528 Binding-protein-dependent transport system inner membrane component N175_06635 PF00528 Binding-protein-dependent transport system inner membrane component N175_06640 PF03372 Endonuclease/Exonuclease/phosphatase family N175_06645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N175_06645 PF00672 HAMP domain N175_06650 PF10689 Protein of unknown function (DUF2496) N175_06655 PF07445 Primosomal replication protein priC N175_06660 PF01925 Sulfite exporter TauE/SafE N175_06665 PF13307 Helicase C-terminal domain N175_06665 PF06733 DEAD_2 N175_06675 PF02810 SEC-C motif N175_06680 PF08668 HDOD domain N175_06680 PF00563 EAL domain N175_06685 PF00149 Calcineurin-like phosphoesterase N175_06690 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD N175_06695 PF01406 tRNA synthetases class I (C) catalytic domain N175_06695 PF09190 DALR domain N175_06700 PF02075 Crossover junction endodeoxyribonuclease RuvC N175_06705 PF01330 RuvA N terminal domain N175_06705 PF07499 RuvA, C-terminal domain N175_06710 PF17864 RuvB AAA lid domain N175_06710 PF05496 Holliday junction DNA helicase RuvB P-loop domain N175_06710 PF05491 RuvB C-terminal winged helix domain N175_06720 PF01654 Cytochrome bd terminal oxidase subunit I N175_06725 PF02322 Cytochrome bd terminal oxidase subunit II N175_06730 PF08173 Membrane bound YbgT-like protein N175_06735 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) N175_06740 PF03061 Thioesterase superfamily N175_06745 PF01618 MotA/TolQ/ExbB proton channel family N175_06750 PF02472 Biopolymer transport protein ExbD/TolR N175_06765 PF00691 OmpA family N175_06770 PF13525 Outer membrane lipoprotein N175_06770 PF16331 TolA binding protein trimerisation N175_06775 PF02445 Quinolinate synthetase A protein N175_06780 PF13817 IS66 C-terminal element N175_06780 PF03050 Transposase IS66 family N175_06780 PF13005 zinc-finger binding domain of transposase IS66 N175_06780 PF13007 Transposase C of IS166 homeodomain N175_06800 PF00072 Response regulator receiver domain N175_06800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N175_06800 PF09308 LuxQ, periplasmic N175_06800 PF00512 His Kinase A (phospho-acceptor) domain N175_06805 PF06610 L-alanine exporter N175_06820 PF13737 Transposase DDE domain N175_06830 PF12102 Domain of unknown function (DUF3578) N175_06830 PF07728 AAA domain (dynein-related subfamily) N175_06855 PF00990 Diguanylate cyclase, GGDEF domain N175_06855 PF13188 PAS domain N175_06855 PF00563 EAL domain N175_06855 PF03707 Bacterial signalling protein N terminal repeat N175_06860 PF00171 Aldehyde dehydrogenase family N175_06875 PF00440 Bacterial regulatory proteins, tetR family N175_06875 PF16295 Tetracyclin repressor-like, C-terminal domain N175_06880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N175_06880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N175_06880 PF02770 Acyl-CoA dehydrogenase, middle domain N175_06880 PF09317 Domain of unknown function (DUF1974) N175_06885 PF07055 Enoyl reductase FAD binding domain N175_06885 PF12241 Trans-2-enoyl-CoA reductase catalytic region N175_06885 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase N175_06915 PF02913 FAD linked oxidases, C-terminal domain N175_06915 PF01565 FAD binding domain N175_06915 PF13183 4Fe-4S dicluster domain N175_06920 PF04191 Phospholipid methyltransferase N175_06930 PF00221 Aromatic amino acid lyase N175_06935 PF17391 Urocanase N-terminal domain N175_06935 PF17392 Urocanase C-terminal domain N175_06935 PF01175 Urocanase Rossmann-like domain N175_06940 PF00491 Arginase family N175_06945 PF01979 Amidohydrolase family N175_06950 PF07702 UTRA domain N175_06950 PF00392 Bacterial regulatory proteins, gntR family N175_06960 PF04269 Protein of unknown function, DUF440 N175_06965 PF09285 Elongation factor P, C-terminal N175_06965 PF01132 Elongation factor P (EF-P) OB domain N175_06965 PF08207 Elongation factor P (EF-P) KOW-like domain N175_06975 PF03104 DNA polymerase family B, exonuclease domain N175_06975 PF00136 DNA polymerase family B N175_06980 PF00072 Response regulator receiver domain N175_06980 PF00196 Bacterial regulatory proteins, luxR family N175_06985 PF01541 GIY-YIG catalytic domain N175_06985 PF02151 UvrB/uvrC motif N175_06985 PF08459 UvrC Helix-hairpin-helix N-terminal N175_06990 PF01066 CDP-alcohol phosphatidyltransferase N175_07025 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain N175_07025 PF01409 tRNA synthetases class II core domain (F) N175_07030 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain N175_07030 PF03147 Ferredoxin-fold anticodon binding domain N175_07030 PF03483 B3/4 domain N175_07030 PF01588 Putative tRNA binding domain N175_07030 PF03484 tRNA synthetase B5 domain N175_07045 PF05724 Thiopurine S-methyltransferase (TPMT) N175_07050 PF13426 PAS domain N175_07050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N175_07050 PF08447 PAS fold N175_07055 PF02222 ATP-grasp domain N175_07060 PF00990 Diguanylate cyclase, GGDEF domain N175_07060 PF08448 PAS fold N175_07060 PF00563 EAL domain N175_07060 PF08447 PAS fold N175_07065 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region N175_07065 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region N175_07070 PF04172 LrgB-like family N175_07075 PF03788 LrgA family N175_07080 PF08411 Exonuclease C-terminal N175_07080 PF00929 Exonuclease N175_07090 PF13460 NAD(P)H-binding N175_07095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N175_07095 PF00672 HAMP domain N175_07095 PF02743 Cache domain N175_07100 PF03412 Peptidase C39 family N175_07100 PF00664 ABC transporter transmembrane region N175_07100 PF00005 ABC transporter N175_07110 PF00664 ABC transporter transmembrane region N175_07110 PF00005 ABC transporter N175_07110 PF03412 Peptidase C39 family N175_07120 PF02794 RTX toxin acyltransferase family N175_07125 PF07634 RtxA repeat N175_07125 PF16671 Actin cross-linking domain N175_07125 PF11713 Peptidase C80 family N175_07125 PF11647 Membrane Localization Domain N175_07125 PF12146 Serine aminopeptidase, S33 N175_07135 PF02654 Cobalamin-5-phosphate synthase N175_07140 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase N175_07150 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family N175_07155 PF01032 FecCD transport family N175_07180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N175_07180 PF03466 LysR substrate binding domain N175_07190 PF01863 Protein of unknown function DUF45 N175_07195 PF05971 RNA methyltransferase N175_07210 PF04204 Homoserine O-succinyltransferase N175_07230 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N175_07245 PF17203 Single cache domain 3 N175_07245 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain N175_07245 PF00989 PAS fold N175_07245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N175_07250 PF00072 Response regulator receiver domain N175_07250 PF12431 Transcriptional regulator N175_07260 PF00072 Response regulator receiver domain N175_07260 PF01584 CheW-like domain N175_07265 PF18494 Pullulanase Ins domain N175_07265 PF03714 Bacterial pullanase-associated domain N175_07265 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) N175_07265 PF11852 Domain of unknown function (DUF3372) N175_07265 PF17967 Pullulanase N2 domain N175_07275 PF00072 Response regulator receiver domain N175_07275 PF00990 Diguanylate cyclase, GGDEF domain N175_07300 PF02899 Phage integrase, N-terminal SAM-like domain N175_07300 PF00589 Phage integrase family N175_07330 PF04717 Type VI secretion system, phage-baseplate injector N175_07330 PF16671 Actin cross-linking domain N175_07375 PF07724 AAA domain (Cdc48 subfamily) N175_07375 PF17871 AAA lid domain N175_07375 PF00004 ATPase family associated with various cellular activities (AAA) N175_07375 PF10431 C-terminal, D2-small domain, of ClpB protein N175_07380 PF07478 D-ala D-ala ligase C-terminus N175_07400 PF16697 Inner membrane component of T3SS, cytoplasmic domain N175_07425 PF00069 Protein kinase domain N175_07425 PF08239 Bacterial SH3 domain N175_07440 PF00665 Integrase core domain N175_07455 PF00486 Transcriptional regulatory protein, C terminal N175_07470 PF13276 HTH-like domain N175_07470 PF00665 Integrase core domain N175_07470 PF13333 Integrase core domain N175_07475 PF13007 Transposase C of IS166 homeodomain N175_07475 PF13817 IS66 C-terminal element N175_07475 PF03050 Transposase IS66 family N175_07475 PF13005 zinc-finger binding domain of transposase IS66 N175_07495 PF01042 Endoribonuclease L-PSP N175_07505 PF02322 Cytochrome bd terminal oxidase subunit II N175_07510 PF01654 Cytochrome bd terminal oxidase subunit I N175_07525 PF05114 Protein of unknown function (DUF692) N175_07550 PF00672 HAMP domain N175_07550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N175_07550 PF17200 Single Cache domain 2 N175_07560 PF07885 Ion channel N175_07565 PF12792 CSS motif domain associated with EAL N175_07565 PF00563 EAL domain N175_07570 PF00294 pfkB family carbohydrate kinase N175_07575 PF02378 Phosphotransferase system, EIIC N175_07575 PF00367 phosphotransferase system, EIIB N175_07580 PF00356 Bacterial regulatory proteins, lacI family N175_07585 PF00251 Glycosyl hydrolases family 32 N-terminal domain N175_07585 PF08244 Glycosyl hydrolases family 32 C terminal N175_07590 PF02743 Cache domain N175_07590 PF00672 HAMP domain N175_07590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N175_07605 PF00005 ABC transporter N175_07610 PF01032 FecCD transport family N175_07620 PF02472 Biopolymer transport protein ExbD/TolR N175_07625 PF01618 MotA/TolQ/ExbB proton channel family N175_07630 PF03544 Gram-negative bacterial TonB protein C-terminal N175_07635 PF06228 Haem utilisation ChuX/HutX N175_07640 PF01243 Pyridoxamine 5'-phosphate oxidase N175_07645 PF07715 TonB-dependent Receptor Plug Domain N175_07645 PF00593 TonB dependent receptor N175_07645 PF04886 PT repeat N175_07650 PF00480 ROK family N175_07655 PF00925 GTP cyclohydrolase II N175_07680 PF03734 L,D-transpeptidase catalytic domain N175_07680 PF01471 Putative peptidoglycan binding domain N175_07685 PF05951 Bacterial protein of unknown function (DUF882) N175_07690 PF00753 Metallo-beta-lactamase superfamily N175_07705 PF01047 MarR family N175_07710 PF02028 BCCT, betaine/carnitine/choline family transporter N175_07715 PF02743 Cache domain N175_07715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N175_07715 PF00672 HAMP domain N175_07720 PF14579 Helix-hairpin-helix motif N175_07720 PF17657 Bacterial DNA polymerase III alpha subunit finger domain N175_07720 PF14480 DNA polymerase III polC-type N-terminus I N175_07720 PF02811 PHP domain N175_07720 PF07733 Bacterial DNA polymerase III alpha NTPase domain N175_07720 PF00929 Exonuclease N175_07720 PF11490 DNA polymerase III polC-type N-terminus II N175_07725 PF00571 CBS domain N175_07730 PF00155 Aminotransferase class I and II N175_07735 PF00672 HAMP domain N175_07735 PF01966 HD domain N175_07740 PF12729 Four helix bundle sensory module for signal transduction N175_07740 PF00672 HAMP domain N175_07740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N175_07745 PF00072 Response regulator receiver domain N175_07755 PF02895 Signal transducing histidine kinase, homodimeric domain N175_07755 PF01584 CheW-like domain N175_07755 PF01627 Hpt domain N175_07755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N175_07755 PF09078 CheY binding N175_07760 PF12729 Four helix bundle sensory module for signal transduction N175_07760 PF00672 HAMP domain N175_07760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N175_07765 PF01584 CheW-like domain N175_07770 PF01739 CheR methyltransferase, SAM binding domain N175_07770 PF03705 CheR methyltransferase, all-alpha domain N175_07775 PF03975 CheD chemotactic sensory transduction N175_07780 PF01339 CheB methylesterase N175_07780 PF00072 Response regulator receiver domain N175_07790 PF01336 OB-fold nucleic acid binding domain N175_07790 PF00152 tRNA synthetases class II (D, K and N) N175_07795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N175_07795 PF00672 HAMP domain N175_07795 PF17200 Single Cache domain 2 N175_07800 PF01242 6-pyruvoyl tetrahydropterin synthase N175_07805 PF04231 Endonuclease I N175_07810 PF00041 Fibronectin type III domain N175_07810 PF12561 ToxR activated gene A lipoprotein domain N175_07815 PF03313 Serine dehydratase alpha chain N175_07815 PF03315 Serine dehydratase beta chain N175_07820 PF03222 Tryptophan/tyrosine permease family N175_07825 PF00293 NUDIX domain N175_07830 PF04715 Anthranilate synthase component I, N terminal region N175_07830 PF00425 chorismate binding enzyme N175_07845 PF04317 YcjX-like family, DUF463 N175_07850 PF05128 Domain of unknown function (DUF697) N175_07855 PF18024 Helix-turn-helix domain N175_07855 PF00158 Sigma-54 interaction domain N175_07860 PF13302 Acetyltransferase (GNAT) domain N175_07870 PF00990 Diguanylate cyclase, GGDEF domain N175_07875 PF00892 EamA-like transporter family N175_07880 PF01168 Alanine racemase, N-terminal domain N175_07880 PF00842 Alanine racemase, C-terminal domain N175_07885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N175_07885 PF00672 HAMP domain N175_07890 PF00939 Sodium:sulfate symporter transmembrane region N175_07895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N175_07895 PF00512 His Kinase A (phospho-acceptor) domain N175_07895 PF00497 Bacterial extracellular solute-binding proteins, family 3 N175_07900 PF02954 Bacterial regulatory protein, Fis family N175_07900 PF00072 Response regulator receiver domain N175_07900 PF00158 Sigma-54 interaction domain N175_07910 PF00313 'Cold-shock' DNA-binding domain N175_07915 PF03264 NapC/NirT cytochrome c family, N-terminal region N175_07920 PF00270 DEAD/DEAH box helicase N175_07920 PF00271 Helicase conserved C-terminal domain N175_07925 PF00232 Glycosyl hydrolase family 1 N175_07930 PF00356 Bacterial regulatory proteins, lacI family N175_07955 PF00465 Iron-containing alcohol dehydrogenase N175_07960 PF00012 Hsp70 protein N175_07965 PF00012 Hsp70 protein N175_07975 PF00563 EAL domain N175_07975 PF00990 Diguanylate cyclase, GGDEF domain N175_07975 PF08448 PAS fold N175_07995 PF00270 DEAD/DEAH box helicase N175_07995 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold N175_07995 PF11898 Domain of unknown function (DUF3418) N175_07995 PF00271 Helicase conserved C-terminal domain N175_07995 PF04408 Helicase associated domain (HA2) N175_08005 PF03466 LysR substrate binding domain N175_08005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N175_08010 PF07690 Major Facilitator Superfamily N175_08025 PF02894 Oxidoreductase family, C-terminal alpha/beta domain N175_08025 PF01408 Oxidoreductase family, NAD-binding Rossmann fold N175_08030 PF00474 Sodium:solute symporter family N175_08035 PF01380 SIS domain N175_08035 PF00571 CBS domain N175_08040 PF07733 Bacterial DNA polymerase III alpha NTPase domain N175_08040 PF00929 Exonuclease N175_08040 PF17657 Bacterial DNA polymerase III alpha subunit finger domain N175_08040 PF14579 Helix-hairpin-helix motif N175_08040 PF02811 PHP domain N175_08050 PF04962 KduI/IolB family N175_08055 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N175_08055 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N175_08055 PF00205 Thiamine pyrophosphate enzyme, central domain N175_08060 PF00294 pfkB family carbohydrate kinase N175_08065 PF01261 Xylose isomerase-like TIM barrel N175_08075 PF00171 Aldehyde dehydrogenase family N175_08085 PF02894 Oxidoreductase family, C-terminal alpha/beta domain N175_08085 PF01408 Oxidoreductase family, NAD-binding Rossmann fold N175_08090 PF02074 Carboxypeptidase Taq (M32) metallopeptidase N175_08105 PF13737 Transposase DDE domain N175_08165 PF00271 Helicase conserved C-terminal domain N175_08185 PF03050 Transposase IS66 family N175_08185 PF13817 IS66 C-terminal element N175_08185 PF13007 Transposase C of IS166 homeodomain N175_08185 PF13005 zinc-finger binding domain of transposase IS66 N175_08195 PF02074 Carboxypeptidase Taq (M32) metallopeptidase N175_08200 PF01810 LysE type translocator N175_08205 PF01235 Sodium:alanine symporter family N175_08220 PF01546 Peptidase family M20/M25/M40 N175_08220 PF07687 Peptidase dimerisation domain N175_08225 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N175_08230 PF04209 homogentisate 1,2-dioxygenase N175_08240 PF02798 Glutathione S-transferase, N-terminal domain N175_08240 PF14497 Glutathione S-transferase, C-terminal domain N175_08245 PF04151 Bacterial pre-peptidase C-terminal domain N175_08245 PF04389 Peptidase family M28 N175_08270 PF01618 MotA/TolQ/ExbB proton channel family N175_08275 PF01618 MotA/TolQ/ExbB proton channel family N175_08280 PF02472 Biopolymer transport protein ExbD/TolR N175_08295 PF01734 Patatin-like phospholipase N175_08300 PF01068 ATP dependent DNA ligase domain N175_08300 PF14743 DNA ligase OB-like domain N175_08305 PF01554 MatE N175_08325 PF00877 NlpC/P60 family N175_08330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N175_08330 PF00672 HAMP domain N175_08330 PF12729 Four helix bundle sensory module for signal transduction N175_08345 PF00480 ROK family N175_08355 PF03205 Molybdopterin guanine dinucleotide synthesis protein B N175_08360 PF12804 MobA-like NTP transferase domain N175_08365 PF08402 TOBE domain N175_08365 PF00005 ABC transporter N175_08370 PF00528 Binding-protein-dependent transport system inner membrane component N175_08380 PF07690 Major Facilitator Superfamily N175_08385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N175_08385 PF07730 Histidine kinase N175_08385 PF05231 MASE1 N175_08390 PF00072 Response regulator receiver domain N175_08390 PF00196 Bacterial regulatory proteins, luxR family N175_08395 PF12848 ABC transporter N175_08395 PF00005 ABC transporter N175_08400 PF00909 Ammonium Transporter Family N175_08405 PF02146 Sir2 family N175_08410 PF13416 Bacterial extracellular solute-binding protein N175_08415 PF13416 Bacterial extracellular solute-binding protein N175_08420 PF00528 Binding-protein-dependent transport system inner membrane component N175_08425 PF00528 Binding-protein-dependent transport system inner membrane component N175_08430 PF00005 ABC transporter N175_08430 PF08402 TOBE domain N175_08450 PF01171 PP-loop family N175_08455 PF00582 Universal stress protein family N175_08460 PF00027 Cyclic nucleotide-binding domain N175_08460 PF13545 Crp-like helix-turn-helix domain N175_08475 PF00403 Heavy-metal-associated domain N175_08485 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP N175_08485 PF13442 Cytochrome C oxidase, cbb3-type, subunit III N175_08500 PF00115 Cytochrome C and Quinol oxidase polypeptide I N175_08525 PF06303 MatP N-terminal domain N175_08525 PF17414 MatP C-terminal ribbon-helix-helix domain N175_08530 PF13654 AAA domain N175_08530 PF05362 Lon protease (S16) C-terminal proteolytic domain N175_08535 PF07977 FabA-like domain N175_08540 PF04957 Ribosome modulation factor N175_08560 PF10672 S-adenosylmethionine-dependent methyltransferase N175_08560 PF02926 THUMP domain N175_08560 PF01170 Putative RNA methylase family UPF0020 N175_08565 PF07126 Cell-division protein ZapC N175_08570 PF01180 Dihydroorotate dehydrogenase N175_08575 PF05088 Bacterial NAD-glutamate dehydrogenase N175_08585 PF11940 Domain of unknown function (DUF3458) Ig-like fold N175_08585 PF17432 Domain of unknown function (DUF3458_C) ARM repeats N175_08585 PF01433 Peptidase family M1 domain N175_08595 PF17804 Tail specific protease N-terminal domain N175_08595 PF00595 PDZ domain N175_08595 PF03572 Peptidase family S41 N175_08595 PF11818 C-terminal domain of tail specific protease (DUF3340) N175_08605 PF13185 GAF domain N175_08610 PF00005 ABC transporter N175_08610 PF00664 ABC transporter transmembrane region N175_08615 PF04403 Paraquat-inducible protein A N175_08620 PF02470 MlaD protein N175_08625 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF N175_08625 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF N175_08625 PF01189 16S rRNA methyltransferase RsmB/F N175_08630 PF17783 CvfB-like winged helix domain N175_08630 PF13509 S1 domain N175_08645 PF00391 PEP-utilising enzyme, mobile domain N175_08645 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain N175_08645 PF02896 PEP-utilising enzyme, TIM barrel domain N175_08650 PF00793 DAHP synthetase I family N175_08655 PF04461 Protein of unknown function (DUF520) N175_08660 PF00072 Response regulator receiver domain N175_08660 PF00990 Diguanylate cyclase, GGDEF domain N175_08670 PF14824 Sirohaem biosynthesis protein central N175_08670 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases N175_08670 PF10414 Sirohaem synthase dimerisation region N175_08675 PF00497 Bacterial extracellular solute-binding proteins, family 3 N175_08680 PF00528 Binding-protein-dependent transport system inner membrane component N175_08685 PF00528 Binding-protein-dependent transport system inner membrane component N175_08690 PF00005 ABC transporter N175_08695 PF01027 Inhibitor of apoptosis-promoting Bax1 N175_08700 PF04358 DsrC like protein N175_08705 PF00708 Acylphosphatase N175_08710 PF10672 S-adenosylmethionine-dependent methyltransferase N175_08710 PF17785 PUA-like domain N175_08715 PF04986 Putative transposase N175_08715 PF14319 Transposase zinc-binding domain N175_08720 PF17785 PUA-like domain N175_08720 PF10672 S-adenosylmethionine-dependent methyltransferase N175_08745 PF06508 Queuosine biosynthesis protein QueC N175_08750 PF04055 Radical SAM superfamily N175_08770 PF16177 Acetyl-coenzyme A synthetase N-terminus N175_08770 PF13193 AMP-binding enzyme C-terminal domain N175_08770 PF00501 AMP-binding enzyme N175_08775 PF04303 PrpF protein N175_08780 PF00330 Aconitase family (aconitate hydratase) N175_08780 PF00694 Aconitase C-terminal domain N175_08785 PF00285 Citrate synthase, C-terminal domain N175_08815 PF01970 Tripartite tricarboxylate transporter TctA family N175_08820 PF00486 Transcriptional regulatory protein, C terminal N175_08820 PF00072 Response regulator receiver domain N175_08825 PF00672 HAMP domain N175_08825 PF00512 His Kinase A (phospho-acceptor) domain N175_08825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N175_08830 PF01219 Prokaryotic diacylglycerol kinase N175_08835 PF00724 NADH:flavin oxidoreductase / NADH oxidase family N175_08840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N175_08840 PF03466 LysR substrate binding domain N175_08845 PF02653 Branched-chain amino acid transport system / permease component N175_08850 PF00005 ABC transporter N175_08855 PF13407 Periplasmic binding protein domain N175_08880 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit N175_08890 PF12833 Helix-turn-helix domain N175_08900 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N175_08900 PF02378 Phosphotransferase system, EIIC N175_08900 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit N175_08905 PF01238 Phosphomannose isomerase type I N175_08925 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase N175_08930 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase N175_08935 PF04223 Citrate lyase, alpha subunit (CitF) N175_08940 PF03328 HpcH/HpaI aldolase/citrate lyase family N175_08945 PF06857 Malonate decarboxylase delta subunit (MdcD) N175_08950 PF00072 Response regulator receiver domain N175_08950 PF12431 Transcriptional regulator N175_08955 PF17203 Single cache domain 3 N175_08955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N175_08960 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit N175_08965 PF00682 HMGL-like N175_08965 PF00364 Biotin-requiring enzyme N175_08965 PF02436 Conserved carboxylase domain N175_08975 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase N175_08980 PF08218 Citrate lyase ligase C-terminal domain N175_08985 PF01970 Tripartite tricarboxylate transporter TctA family N175_09000 PF00672 HAMP domain N175_09000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N175_09000 PF12729 Four helix bundle sensory module for signal transduction N175_09005 PF13737 Transposase DDE domain N175_09010 PF00672 HAMP domain N175_09010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N175_09010 PF12729 Four helix bundle sensory module for signal transduction N175_09015 PF00521 DNA gyrase/topoisomerase IV, subunit A N175_09015 PF03989 DNA gyrase C-terminal domain, beta-propeller N175_09025 PF02867 Ribonucleotide reductase, barrel domain N175_09025 PF00317 Ribonucleotide reductase, all-alpha domain N175_09025 PF03477 ATP cone domain N175_09030 PF00268 Ribonucleotide reductase, small chain N175_09035 PF00175 Oxidoreductase NAD-binding domain N175_09035 PF00970 Oxidoreductase FAD-binding domain N175_09035 PF00111 2Fe-2S iron-sulfur cluster binding domain N175_09045 PF00994 Probable molybdopterin binding domain N175_09060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N175_09060 PF00672 HAMP domain N175_09060 PF17200 Single Cache domain 2 N175_09070 PF16653 Saccharopine dehydrogenase C-terminal domain N175_09070 PF03435 Saccharopine dehydrogenase NADP binding domain N175_09075 PF00202 Aminotransferase class-III N175_09085 PF06965 Na+/H+ antiporter 1 N175_09100 PF00005 ABC transporter N175_09105 PF01554 MatE N175_09110 PF13460 NAD(P)H-binding N175_09110 PF11066 Protein of unknown function (DUF2867) N175_09120 PF07690 Major Facilitator Superfamily N175_09125 PF01479 S4 domain N175_09125 PF00849 RNA pseudouridylate synthase N175_09130 PF00271 Helicase conserved C-terminal domain N175_09130 PF04851 Type III restriction enzyme, res subunit N175_09140 PF00486 Transcriptional regulatory protein, C terminal N175_09140 PF00072 Response regulator receiver domain N175_09145 PF00672 HAMP domain N175_09145 PF00512 His Kinase A (phospho-acceptor) domain N175_09145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N175_09175 PF13737 Transposase DDE domain N175_09190 PF00849 RNA pseudouridylate synthase N175_09195 PF00209 Sodium:neurotransmitter symporter family N175_09200 PF13396 Phospholipase_D-nuclease N-terminal N175_09200 PF13091 PLD-like domain N175_09205 PF01053 Cys/Met metabolism PLP-dependent enzyme N175_09210 PF13673 Acetyltransferase (GNAT) domain N175_09210 PF13302 Acetyltransferase (GNAT) domain N175_09210 PF00958 GMP synthase C terminal domain N175_09210 PF00117 Glutamine amidotransferase class-I N175_09210 PF03352 Methyladenine glycosylase N175_09220 PF06667 Phage shock protein B N175_09225 PF04012 PspA/IM30 family N175_09230 PF00158 Sigma-54 interaction domain N175_09230 PF02954 Bacterial regulatory protein, Fis family N175_09235 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N175_09240 PF00528 Binding-protein-dependent transport system inner membrane component N175_09245 PF12911 N-terminal TM domain of oligopeptide transport permease C N175_09245 PF00528 Binding-protein-dependent transport system inner membrane component N175_09250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N175_09250 PF00005 ABC transporter N175_09255 PF00005 ABC transporter N175_09270 PF02833 DHHA2 domain N175_09270 PF01368 DHH family N175_09280 PF01568 Molydopterin dinucleotide binding domain N175_09280 PF18364 Molybdopterin oxidoreductase N-terminal domain N175_09280 PF00384 Molybdopterin oxidoreductase N175_09285 PF03264 NapC/NirT cytochrome c family, N-terminal region N175_09290 PF06796 Periplasmic nitrate reductase protein NapE N175_09295 PF01226 Formate/nitrite transporter N175_09310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N175_09310 PF03466 LysR substrate binding domain N175_09320 PF02698 DUF218 domain N175_09325 PF00265 Thymidine kinase N175_09330 PF02938 GAD domain N175_09330 PF00152 tRNA synthetases class II (D, K and N) N175_09330 PF01336 OB-fold nucleic acid binding domain N175_09335 PF01904 Protein of unknown function DUF72 N175_09340 PF05925 Enterobacterial virulence protein IpgD N175_09345 PF13649 Methyltransferase domain N175_09355 PF08443 RimK-like ATP-grasp domain N175_09355 PF18030 RimK PreATP-grasp domain N175_09370 PF04310 MukB N-terminal N175_09370 PF16330 MukB hinge domain N175_09375 PF04288 MukE-like family N175_09380 PF17193 MukF C-terminal domain N175_09380 PF17192 MukF middle domain N175_09380 PF03882 MukF winged-helix domain N175_09390 PF02698 DUF218 domain N175_09395 PF00072 Response regulator receiver domain N175_09395 PF00486 Transcriptional regulatory protein, C terminal N175_09405 PF02613 Nitrate reductase delta subunit N175_09410 PF00356 Bacterial regulatory proteins, lacI family N175_09415 PF04993 TfoX N-terminal domain N175_09415 PF04994 TfoX C-terminal domain N175_09435 PF00534 Glycosyl transferases group 1 N175_09435 PF08323 Starch synthase catalytic domain N175_09440 PF00483 Nucleotidyl transferase N175_09445 PF08272 Topoisomerase I zinc-ribbon-like N175_09445 PF01131 DNA topoisomerase N175_09445 PF01751 Toprim domain N175_09445 PF01396 Topoisomerase DNA binding C4 zinc finger N175_09450 PF10692 Protein of unknown function (DUF2498) N175_09455 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) N175_09460 PF03588 Leucyl/phenylalanyl-tRNA protein transferase N175_09465 PF04376 Arginine-tRNA-protein transferase, N terminus N175_09465 PF04377 Arginine-tRNA-protein transferase, C terminus N175_09470 PF01176 Translation initiation factor 1A / IF-1 N175_09475 PF00004 ATPase family associated with various cellular activities (AAA) N175_09475 PF17871 AAA lid domain N175_09475 PF02861 Clp amino terminal domain, pathogenicity island component N175_09475 PF10431 C-terminal, D2-small domain, of ClpB protein N175_09475 PF07724 AAA domain (Cdc48 subfamily) N175_09480 PF02617 ATP-dependent Clp protease adaptor protein ClpS N175_09485 PF00313 'Cold-shock' DNA-binding domain N175_09490 PF03971 Monomeric isocitrate dehydrogenase N175_09495 PF00849 RNA pseudouridylate synthase N175_09500 PF01502 Phosphoribosyl-AMP cyclohydrolase N175_09500 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase N175_09505 PF00977 Histidine biosynthesis protein N175_09510 PF00977 Histidine biosynthesis protein N175_09515 PF00117 Glutamine amidotransferase class-I N175_09520 PF00475 Imidazoleglycerol-phosphate dehydratase N175_09520 PF08645 Polynucleotide kinase 3 phosphatase N175_09525 PF00155 Aminotransferase class I and II N175_09530 PF00815 Histidinol dehydrogenase N175_09535 PF08029 HisG, C-terminal domain N175_09535 PF01634 ATP phosphoribosyltransferase N175_09540 PF03553 Na+/H+ antiporter family N175_09545 PF00816 H-NS histone family N175_09550 PF00294 pfkB family carbohydrate kinase N175_09565 PF04356 Protein of unknown function (DUF489) N175_09570 PF08328 Adenylosuccinate lyase C-terminal N175_09570 PF00206 Lyase N175_09575 PF00266 Aminotransferase class-V N175_09585 PF00497 Bacterial extracellular solute-binding proteins, family 3 N175_09585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N175_09585 PF00512 His Kinase A (phospho-acceptor) domain N175_09600 PF04994 TfoX C-terminal domain N175_09600 PF04993 TfoX N-terminal domain N175_09610 PF03956 Lysine exporter LysO N175_09620 PF00282 Pyridoxal-dependent decarboxylase conserved domain N175_09625 PF01380 SIS domain N175_09625 PF01418 Helix-turn-helix domain, rpiR family N175_09630 PF00465 Iron-containing alcohol dehydrogenase N175_09635 PF00462 Glutaredoxin N175_09640 PF06826 Predicted Permease Membrane Region N175_09640 PF02080 TrkA-C domain N175_09645 PF01259 SAICAR synthetase N175_09655 PF00390 Malic enzyme, N-terminal domain N175_09655 PF03949 Malic enzyme, NAD binding domain N175_09665 PF02698 DUF218 domain N175_09670 PF00266 Aminotransferase class-V N175_09680 PF00990 Diguanylate cyclase, GGDEF domain N175_09680 PF00072 Response regulator receiver domain N175_09685 PF07992 Pyridine nucleotide-disulphide oxidoreductase N175_09690 PF00005 ABC transporter N175_09690 PF00664 ABC transporter transmembrane region N175_09695 PF00664 ABC transporter transmembrane region N175_09695 PF00005 ABC transporter N175_09710 PF04542 Sigma-70 region 2 N175_09710 PF08281 Sigma-70, region 4 N175_09720 PF00563 EAL domain N175_09720 PF03707 Bacterial signalling protein N terminal repeat N175_09720 PF00990 Diguanylate cyclase, GGDEF domain N175_09725 PF01479 S4 domain N175_09725 PF00849 RNA pseudouridylate synthase N175_09730 PF01300 Telomere recombination N175_09735 PF02811 PHP domain N175_09740 PF08056 Tryptophan operon leader peptide N175_09745 PF00425 chorismate binding enzyme N175_09745 PF04715 Anthranilate synthase component I, N terminal region N175_09750 PF00117 Glutamine amidotransferase class-I N175_09755 PF00591 Glycosyl transferase family, a/b domain N175_09755 PF02885 Glycosyl transferase family, helical bundle domain N175_09760 PF00218 Indole-3-glycerol phosphate synthase N175_09760 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase N175_09765 PF00291 Pyridoxal-phosphate dependent enzyme N175_09775 PF00375 Sodium:dicarboxylate symporter family N175_09790 PF04279 Intracellular septation protein A N175_09795 PF03061 Thioesterase superfamily N175_09800 PF03795 YCII-related domain N175_09810 PF08267 Cobalamin-independent synthase, N-terminal domain N175_09810 PF01717 Cobalamin-independent synthase, Catalytic domain N175_09815 PF03466 LysR substrate binding domain N175_09815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N175_09830 PF00989 PAS fold N175_09830 PF00990 Diguanylate cyclase, GGDEF domain N175_09830 PF01590 GAF domain N175_09830 PF00563 EAL domain N175_09835 PF00089 Trypsin N175_09840 PF04055 Radical SAM superfamily N175_09840 PF08497 Radical SAM N-terminal N175_09840 PF11842 Domain of unknown function (DUF3362) N175_09850 PF16036 Chalcone isomerase-like N175_09875 PF00106 short chain dehydrogenase N175_09885 PF01435 Peptidase family M48 N175_09895 PF13491 4TM region of DNA translocase FtsK/SpoIIIE N175_09895 PF17854 FtsK alpha domain N175_09895 PF09397 Ftsk gamma domain N175_09895 PF01580 FtsK/SpoIIIE family N175_09900 PF01037 Lrp/AsnC ligand binding domain N175_09905 PF05222 Alanine dehydrogenase/PNT, N-terminal domain N175_09905 PF01262 Alanine dehydrogenase/PNT, C-terminal domain N175_09915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N175_09915 PF03466 LysR substrate binding domain N175_09925 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family N175_09930 PF18073 Rubredoxin metal binding domain N175_09935 PF06305 Lipopolysaccharide assembly protein A domain N175_09945 PF00575 S1 RNA binding domain N175_09950 PF02224 Cytidylate kinase N175_09960 PF13145 PPIC-type PPIASE domain N175_09965 PF00216 Bacterial DNA-binding protein N175_09970 PF00004 ATPase family associated with various cellular activities (AAA) N175_09970 PF05362 Lon protease (S16) C-terminal proteolytic domain N175_09970 PF02190 ATP-dependent protease La (LON) substrate-binding domain N175_09975 PF07724 AAA domain (Cdc48 subfamily) N175_09975 PF10431 C-terminal, D2-small domain, of ClpB protein N175_09975 PF06689 ClpX C4-type zinc finger N175_09980 PF00574 Clp protease N175_09985 PF05697 Bacterial trigger factor protein (TF) N175_09985 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N175_09985 PF05698 Bacterial trigger factor protein (TF) C-terminus N175_09995 PF02743 Cache domain N175_09995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N175_09995 PF00512 His Kinase A (phospho-acceptor) domain N175_10000 PF02954 Bacterial regulatory protein, Fis family N175_10000 PF00072 Response regulator receiver domain N175_10000 PF00158 Sigma-54 interaction domain N175_10005 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component N175_10010 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component N175_10015 PF03480 Bacterial extracellular solute-binding protein, family 7 N175_10020 PF01547 Bacterial extracellular solute-binding protein N175_10025 PF00512 His Kinase A (phospho-acceptor) domain N175_10025 PF00672 HAMP domain N175_10025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N175_10030 PF00072 Response regulator receiver domain N175_10030 PF00486 Transcriptional regulatory protein, C terminal N175_10035 PF02696 Uncharacterized ACR, YdiU/UPF0061 family N175_10040 PF03315 Serine dehydratase beta chain N175_10040 PF03313 Serine dehydratase alpha chain N175_10050 PF00270 DEAD/DEAH box helicase N175_10050 PF00271 Helicase conserved C-terminal domain N175_10055 PF00128 Alpha amylase, catalytic domain N175_10055 PF02903 Alpha amylase, N-terminal ig-like domain N175_10055 PF16657 Maltogenic Amylase, C-terminal domain N175_10060 PF02028 BCCT, betaine/carnitine/choline family transporter N175_10065 PF02310 B12 binding domain N175_10065 PF02607 B12 binding domain N175_10065 PF02574 Homocysteine S-methyltransferase N175_10065 PF02965 Vitamin B12 dependent methionine synthase, activation domain N175_10065 PF00809 Pterin binding enzyme N175_10075 PF09905 DNA-binding protein VF530 N175_10080 PF01551 Peptidase family M23 N175_10095 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain N175_10095 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain N175_10100 PF06483 Chitinase C N175_10100 PF00704 Glycosyl hydrolases family 18 N175_10105 PF07662 Na+ dependent nucleoside transporter C-terminus N175_10105 PF01773 Na+ dependent nucleoside transporter N-terminus N175_10105 PF07670 Nucleoside recognition N175_10110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N175_10110 PF03466 LysR substrate binding domain N175_10115 PF13406 Transglycosylase SLT domain N175_10120 PF05166 YcgL domain N175_10125 PF05209 Septum formation inhibitor MinC, N-terminal domain N175_10125 PF03775 Septum formation inhibitor MinC, C-terminal domain N175_10130 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain N175_10135 PF03776 Septum formation topological specificity factor MinE N175_10140 PF01612 3'-5' exonuclease N175_10140 PF00570 HRDC domain N175_10145 PF13193 AMP-binding enzyme C-terminal domain N175_10145 PF00501 AMP-binding enzyme N175_10150 PF00561 alpha/beta hydrolase fold N175_10165 PF00814 Glycoprotease family N175_10170 PF04851 Type III restriction enzyme, res subunit N175_10170 PF13307 Helicase C-terminal domain N175_10180 PF01842 ACT domain N175_10180 PF00551 Formyl transferase N175_10185 PF00724 NADH:flavin oxidoreductase / NADH oxidase family N175_10185 PF07992 Pyridine nucleotide-disulphide oxidoreductase N175_10190 PF01343 Peptidase family S49 N175_10195 PF17763 Glutaminase/Asparaginase C-terminal domain N175_10195 PF00710 Asparaginase, N-terminal N175_10200 PF07023 Protein of unknown function (DUF1315) N175_10210 PF01641 SelR domain N175_10215 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain N175_10215 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain N175_10220 PF01263 Aldose 1-epimerase N175_10225 PF13847 Methyltransferase domain N175_10245 PF03692 Putative zinc- or iron-chelating domain N175_10255 PF02575 YbaB/EbfC DNA-binding family N175_10260 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding N175_10260 PF12169 DNA polymerase III subunits gamma and tau domain III N175_10260 PF12170 DNA polymerase III tau subunit V interacting with alpha N175_10265 PF00156 Phosphoribosyl transferase domain N175_10270 PF04304 Protein of unknown function (DUF454) N175_10280 PF00072 Response regulator receiver domain N175_10285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N175_10285 PF03466 LysR substrate binding domain N175_10290 PF00881 Nitroreductase family N175_10295 PF00378 Enoyl-CoA hydratase/isomerase N175_10295 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain N175_10295 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain N175_10300 PF02803 Thiolase, C-terminal domain N175_10300 PF00108 Thiolase, N-terminal domain N175_10310 PF04542 Sigma-70 region 2 N175_10310 PF08281 Sigma-70, region 4 N175_10320 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) N175_10325 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) N175_10330 PF12557 Cob(I)alamin adenosyltransferase N terminal N175_10330 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP N175_10335 PF05170 AsmA family N175_10340 PF00485 Phosphoribulokinase / Uridine kinase family N175_10345 PF10609 NUBPL iron-transfer P-loop NTPase N175_10350 PF01588 Putative tRNA binding domain N175_10350 PF09334 tRNA synthetases class I (M) N175_10360 PF01048 Phosphorylase superfamily N175_10365 PF00403 Heavy-metal-associated domain N175_10375 PF00392 Bacterial regulatory proteins, gntR family N175_10375 PF03061 Thioesterase superfamily N175_10375 PF00571 CBS domain N175_10375 PF07085 DRTGG domain N175_10380 PF00990 Diguanylate cyclase, GGDEF domain N175_10380 PF07694 5TMR of 5TMR-LYT N175_10385 PF02391 MoaE protein N175_10390 PF02597 ThiS family N175_10395 PF01967 MoaC family N175_10400 PF00994 Probable molybdopterin binding domain N175_10405 PF04055 Radical SAM superfamily N175_10405 PF06463 Molybdenum Cofactor Synthesis C N175_10410 PF01933 Uncharacterised protein family UPF0052 N175_10415 PF01627 Hpt domain N175_10425 PF17757 UvrB interaction domain N175_10425 PF00271 Helicase conserved C-terminal domain N175_10425 PF12344 Ultra-violet resistance protein B N175_10425 PF02151 UvrB/uvrC motif N175_10425 PF04851 Type III restriction enzyme, res subunit N175_10435 PF02018 Carbohydrate binding domain N175_10435 PF02927 Cellulase N-terminal ig-like domain N175_10435 PF00759 Glycosyl hydrolase family 9 N175_10445 PF00793 DAHP synthetase I family N175_10455 PF00425 chorismate binding enzyme N175_10460 PF00501 AMP-binding enzyme N175_10460 PF13193 AMP-binding enzyme C-terminal domain N175_10465 PF00550 Phosphopantetheine attachment site N175_10465 PF00857 Isochorismatase family N175_10470 PF05977 Transmembrane secretion effector N175_10475 PF00501 AMP-binding enzyme N175_10475 PF13193 AMP-binding enzyme C-terminal domain N175_10475 PF00668 Condensation domain N175_10475 PF00550 Phosphopantetheine attachment site N175_10480 PF04986 Putative transposase N175_10480 PF14319 Transposase zinc-binding domain N175_10485 PF00501 AMP-binding enzyme N175_10485 PF00668 Condensation domain N175_10485 PF13193 AMP-binding enzyme C-terminal domain N175_10485 PF00975 Thioesterase domain N175_10485 PF00550 Phosphopantetheine attachment site N175_10495 PF00756 Putative esterase N175_10495 PF11806 Domain of unknown function (DUF3327) N175_10505 PF07715 TonB-dependent Receptor Plug Domain N175_10510 PF01648 4'-phosphopantetheinyl transferase superfamily N175_10510 PF17837 4'-phosphopantetheinyl transferase N-terminal domain N175_10515 PF02508 Rnf-Nqr subunit, membrane protein N175_10520 PF04060 Putative Fe-S cluster N175_10525 PF13375 RnfC Barrel sandwich hybrid domain N175_10525 PF10531 SLBB domain N175_10525 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit N175_10525 PF12838 4Fe-4S dicluster domain N175_10530 PF03116 NQR2, RnfD, RnfE family N175_10545 PF00730 HhH-GPD superfamily base excision DNA repair protein N175_10545 PF00633 Helix-hairpin-helix motif N175_10545 PF10576 Iron-sulfur binding domain of endonuclease III N175_10550 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N175_10555 PF00691 OmpA family N175_10555 PF18393 MotY N-terminal domain N175_10560 PF00929 Exonuclease N175_10565 PF03553 Na+/H+ antiporter family N175_10565 PF13726 Na+-H+ antiporter family N175_10570 PF00156 Phosphoribosyl transferase domain N175_10575 PF02674 Colicin V production protein N175_10580 PF05036 Sporulation related domain N175_10585 PF02875 Mur ligase family, glutamate ligase domain N175_10585 PF08245 Mur ligase middle domain N175_10590 PF01039 Carboxyl transferase domain N175_10590 PF17848 Acetyl-coA carboxylase zinc finger domain N175_10610 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain N175_10610 PF00749 tRNA synthetases class I (E and Q), catalytic domain N175_10615 PF02378 Phosphotransferase system, EIIC N175_10615 PF00367 phosphotransferase system, EIIB N175_10615 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 N175_10620 PF01979 Amidohydrolase family N175_10625 PF00480 ROK family N175_10625 PF01047 MarR family N175_10630 PF00999 Sodium/hydrogen exchanger family N175_10630 PF02254 TrkA-N domain N175_10640 PF13537 Glutamine amidotransferase domain N175_10640 PF00733 Asparagine synthase N175_10645 PF02357 Transcription termination factor nusG N175_10650 PF00854 POT family N175_10655 PF00762 Ferrochelatase N175_10660 PF05191 Adenylate kinase, active site lid N175_10665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N175_10665 PF00183 Hsp90 protein N175_10675 PF00486 Transcriptional regulatory protein, C terminal N175_10680 PF17323 Trans-membrane regulatory protein ToxS N175_10690 PF12850 Calcineurin-like phosphoesterase superfamily domain N175_10695 PF01370 NAD dependent epimerase/dehydratase family N175_10695 PF08338 Domain of unknown function (DUF1731) N175_10700 PF00085 Thioredoxin N175_10710 PF16200 C-terminal region of band_7 N175_10710 PF01145 SPFH domain / Band 7 family N175_10720 PF13411 MerR HTH family regulatory protein N175_10725 PF14319 Transposase zinc-binding domain N175_10725 PF04986 Putative transposase N175_10730 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) N175_10735 PF13609 Gram-negative porin N175_10745 PF04354 ZipA, C-terminal FtsZ-binding domain N175_10755 PF00291 Pyridoxal-phosphate dependent enzyme N175_10760 PF00381 PTS HPr component phosphorylation site N175_10765 PF02896 PEP-utilising enzyme, TIM barrel domain N175_10765 PF05524 PEP-utilising enzyme, N-terminal N175_10765 PF00391 PEP-utilising enzyme, mobile domain N175_10770 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 N175_10775 PF01494 FAD binding domain N175_10780 PF04055 Radical SAM superfamily N175_10780 PF01938 TRAM domain N175_10780 PF00919 Uncharacterized protein family UPF0004 N175_10785 PF02562 PhoH-like protein N175_10795 PF00571 CBS domain N175_10795 PF03471 Transporter associated domain N175_10800 PF00795 Carbon-nitrogen hydrolase N175_10805 PF07295 Zinc-ribbon containing domain N175_10810 PF08264 Anticodon-binding domain of tRNA N175_10810 PF00133 tRNA synthetases class I (I, L, M and V) N175_10810 PF13603 Leucyl-tRNA synthetase, Domain 2 N175_10815 PF04390 Lipopolysaccharide-assembly N175_10820 PF06144 DNA polymerase III, delta subunit N175_10820 PF14840 Processivity clamp loader gamma complex DNA pol III C-term N175_10830 PF02590 Predicted SPOUT methyltransferase N175_10835 PF03717 Penicillin-binding Protein dimerisation domain N175_10835 PF00905 Penicillin binding protein transpeptidase domain N175_10840 PF01098 Cell cycle protein N175_10845 PF05036 Sporulation related domain N175_10845 PF03330 Lytic transglycolase N175_10850 PF07943 Penicillin-binding protein 5, C-terminal domain N175_10850 PF00768 D-alanyl-D-alanine carboxypeptidase N175_10855 PF04359 Protein of unknown function (DUF493) N175_10860 PF03099 Biotin/lipoate A/B protein ligase family N175_10875 PF00464 Serine hydroxymethyltransferase N175_10885 PF02397 Bacterial sugar transferase N175_10895 PF10531 SLBB domain N175_10895 PF02563 Polysaccharide biosynthesis/export protein N175_10895 PF18412 Outer-membrane lipoprotein Wza C-terminal domain N175_10900 PF13614 AAA domain N175_10920 PF12561 ToxR activated gene A lipoprotein domain N175_10920 PF17945 Beta/Gamma crystallin N175_10925 PF03808 Glycosyl transferase WecB/TagA/CpsF family N175_10935 PF06426 Serine acetyltransferase, N-terminal N175_10935 PF00132 Bacterial transferase hexapeptide (six repeats) N175_10970 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain N175_10970 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain N175_10970 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain N175_10975 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain N175_10975 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain N175_10975 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain N175_10980 PF02350 UDP-N-acetylglucosamine 2-epimerase N175_10990 PF01451 Low molecular weight phosphotyrosine protein phosphatase N175_10995 PF00873 AcrB/AcrD/AcrF family N175_11000 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N175_11040 PF00672 HAMP domain N175_11040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N175_11040 PF00512 His Kinase A (phospho-acceptor) domain N175_11045 PF00486 Transcriptional regulatory protein, C terminal N175_11045 PF00072 Response regulator receiver domain N175_11050 PF16657 Maltogenic Amylase, C-terminal domain N175_11050 PF00128 Alpha amylase, catalytic domain N175_11055 PF00367 phosphotransferase system, EIIB N175_11055 PF02378 Phosphotransferase system, EIIC N175_11060 PF00356 Bacterial regulatory proteins, lacI family N175_11075 PF00005 ABC transporter N175_11075 PF09383 NIL domain N175_11080 PF00528 Binding-protein-dependent transport system inner membrane component N175_11085 PF03180 NLPA lipoprotein N175_11090 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) N175_11095 PF07348 Syd protein (SUKH-2) N175_11100 PF14489 QueF-like protein N175_11100 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term N175_11110 PF00990 Diguanylate cyclase, GGDEF domain N175_11120 PF03641 Possible lysine decarboxylase N175_11120 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases N175_11120 PF11892 Domain of unknown function (DUF3412) N175_11125 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain N175_11125 PF01367 5'-3' exonuclease, C-terminal SAM fold N175_11135 PF04241 Protein of unknown function (DUF423) N175_11140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N175_11140 PF03466 LysR substrate binding domain N175_11145 PF02568 Thiamine biosynthesis protein (ThiI) N175_11145 PF02926 THUMP domain N175_11150 PF13677 Membrane MotB of proton-channel complex MotA/MotB N175_11150 PF00691 OmpA family N175_11155 PF01618 MotA/TolQ/ExbB proton channel family N175_11165 PF02609 Exonuclease VII small subunit N175_11170 PF00348 Polyprenyl synthetase N175_11175 PF02780 Transketolase, C-terminal domain N175_11175 PF13292 1-deoxy-D-xylulose-5-phosphate synthase N175_11175 PF02779 Transketolase, pyrimidine binding domain N175_11180 PF00849 RNA pseudouridylate synthase N175_11185 PF04287 tRNA pseudouridine synthase C N175_11215 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 N175_11220 PF00444 Ribosomal protein L36 N175_11225 PF01197 Ribosomal protein L31 N175_11230 PF18389 TrmO C-terminal domain N175_11230 PF01980 tRNA-methyltransferase O N175_11235 PF04073 Aminoacyl-tRNA editing domain N175_11235 PF03129 Anticodon binding domain N175_11235 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) N175_11240 PF04391 Protein of unknown function (DUF533) N175_11245 PF06786 Uncharacterised protein family (UPF0253) N175_11260 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain N175_11260 PF02769 AIR synthase related protein, C-terminal domain N175_11260 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal N175_11265 PF00497 Bacterial extracellular solute-binding proteins, family 3 N175_11265 PF01464 Transglycosylase SLT domain N175_11275 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region N175_11280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N175_11280 PF03466 LysR substrate binding domain N175_11285 PF08240 Alcohol dehydrogenase GroES-like domain N175_11285 PF00107 Zinc-binding dehydrogenase N175_11290 PF00756 Putative esterase N175_11295 PF03806 AbgT putative transporter family N175_11320 PF07963 Prokaryotic N-terminal methylation motif N175_11320 PF00114 Pilin (bacterial filament) N175_11325 PF01556 DnaJ C terminal domain N175_11325 PF00226 DnaJ domain N175_11325 PF00684 DnaJ central domain N175_11330 PF00012 Hsp70 protein N175_11335 PF01025 GrpE N175_11340 PF01513 ATP-NAD kinase N175_11345 PF13737 Transposase DDE domain N175_11350 PF01212 Beta-eliminating lyase N175_11355 PF02463 RecF/RecN/SMC N terminal domain N175_11360 PF04355 SmpA / OmlA family N175_11365 PF03658 RnfH family Ubiquitin N175_11370 PF03364 Polyketide cyclase / dehydrase and lipid transport N175_11375 PF01668 SmpB protein N175_11380 PF13356 Arm DNA-binding domain N175_11380 PF00589 Phage integrase family N175_11385 PF12161 HsdM N-terminal domain N175_11385 PF02384 N-6 DNA Methylase N175_11400 PF01420 Type I restriction modification DNA specificity domain N175_11405 PF00271 Helicase conserved C-terminal domain N175_11405 PF08463 EcoEI R protein C-terminal N175_11405 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) N175_11405 PF04851 Type III restriction enzyme, res subunit N175_11410 PF04471 Restriction endonuclease N175_11410 PF14338 Mrr N-terminal domain N175_11425 PF04002 RadC-like JAB domain N175_11535 PF13737 Transposase DDE domain N175_11550 PF01066 CDP-alcohol phosphatidyltransferase N175_11555 PF00005 ABC transporter N175_11560 PF00528 Binding-protein-dependent transport system inner membrane component N175_11565 PF13416 Bacterial extracellular solute-binding protein N175_11575 PF06945 Protein of unknown function (DUF1289) N175_11585 PF02872 5'-nucleotidase, C-terminal domain N175_11585 PF00149 Calcineurin-like phosphoesterase N175_11590 PF13737 Transposase DDE domain N175_11595 PF02028 BCCT, betaine/carnitine/choline family transporter N175_11600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N175_11600 PF03466 LysR substrate binding domain N175_11605 PF01266 FAD dependent oxidoreductase N175_11610 PF01235 Sodium:alanine symporter family N175_11615 PF01184 GPR1/FUN34/yaaH family N175_11620 PF06483 Chitinase C N175_11620 PF00704 Glycosyl hydrolases family 18 N175_11625 PF08543 Phosphomethylpyrimidine kinase N175_11630 PF00958 GMP synthase C terminal domain N175_11630 PF00117 Glutamine amidotransferase class-I N175_11630 PF02540 NAD synthase N175_11635 PF00571 CBS domain N175_11635 PF00478 IMP dehydrogenase / GMP reductase domain N175_11640 PF13742 OB-fold nucleic acid binding domain N175_11640 PF02601 Exonuclease VII, large subunit N175_11650 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal N175_11650 PF01926 50S ribosome-binding GTPase N175_11655 PF13360 PQQ-like domain N175_11660 PF09976 Tetratricopeptide repeat-like domain N175_11665 PF03129 Anticodon binding domain N175_11665 PF13393 Histidyl-tRNA synthetase N175_11670 PF04551 GcpE protein N175_11675 PF13464 Domain of unknown function (DUF4115) N175_11680 PF04055 Radical SAM superfamily N175_11685 PF00334 Nucleoside diphosphate kinase N175_11690 PF00883 Cytosol aminopeptidase family, catalytic domain N175_11690 PF12404 Peptidase N175_11695 PF04384 Iron-sulphur cluster assembly N175_11700 PF00111 2Fe-2S iron-sulfur cluster binding domain N175_11705 PF00012 Hsp70 protein N175_11710 PF07743 HSCB C-terminal oligomerisation domain N175_11710 PF00226 DnaJ domain N175_11715 PF01521 Iron-sulphur cluster biosynthesis N175_11720 PF01592 NifU-like N terminal domain N175_11725 PF00266 Aminotransferase class-V N175_11730 PF02082 Transcriptional regulator N175_11735 PF00588 SpoU rRNA Methylase family N175_11740 PF00459 Inositol monophosphatase family N175_11745 PF07549 SecD/SecF GG Motif N175_11745 PF02355 Protein export membrane protein N175_11750 PF02355 Protein export membrane protein N175_11750 PF13721 SecD export protein N-terminal TM region N175_11750 PF07549 SecD/SecF GG Motif N175_11755 PF02699 Preprotein translocase subunit N175_11760 PF01702 Queuine tRNA-ribosyltransferase N175_11765 PF02547 Queuosine biosynthesis protein N175_11770 PF00571 CBS domain N175_11775 PF00463 Isocitrate lyase family N175_11785 PF01274 Malate synthase N175_11790 PF03466 LysR substrate binding domain N175_11790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N175_11795 PF10417 C-terminal domain of 1-Cys peroxiredoxin N175_11795 PF00578 AhpC/TSA family N175_11800 PF03932 CutC family N175_11805 PF01895 PhoU domain N175_11810 PF00005 ABC transporter N175_11815 PF00528 Binding-protein-dependent transport system inner membrane component N175_11820 PF00528 Binding-protein-dependent transport system inner membrane component N175_11825 PF02503 Polyphosphate kinase middle domain N175_11825 PF13089 Polyphosphate kinase N-terminal domain N175_11825 PF13090 Polyphosphate kinase C-terminal domain 2 N175_11825 PF17941 Polyphosphate kinase C-terminal domain 1 N175_11830 PF02541 Ppx/GppA phosphatase family N175_11835 PF12849 PBP superfamily domain N175_11840 PF00989 PAS fold N175_11840 PF00512 His Kinase A (phospho-acceptor) domain N175_11840 PF11808 Phosphate regulon sensor protein PhoR N175_11840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N175_11845 PF00486 Transcriptional regulatory protein, C terminal N175_11845 PF00072 Response regulator receiver domain N175_11850 PF04381 Putative exonuclease, RdgC N175_11860 PF00037 4Fe-4S binding domain N175_11865 PF00881 Nitroreductase family N175_11910 PF07724 AAA domain (Cdc48 subfamily) N175_11910 PF17871 AAA lid domain N175_11910 PF00004 ATPase family associated with various cellular activities (AAA) N175_11910 PF02861 Clp amino terminal domain, pathogenicity island component N175_11910 PF10431 C-terminal, D2-small domain, of ClpB protein N175_11920 PF01479 S4 domain N175_11920 PF00849 RNA pseudouridylate synthase N175_11925 PF13525 Outer membrane lipoprotein N175_11935 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein N175_11940 PF00800 Prephenate dehydratase N175_11940 PF01817 Chorismate mutase type II N175_11945 PF13416 Bacterial extracellular solute-binding protein N175_11950 PF00563 EAL domain N175_11950 PF00990 Diguanylate cyclase, GGDEF domain N175_11955 PF01931 Protein of unknown function DUF84 N175_11965 PF14718 Soluble lytic murein transglycosylase L domain N175_11965 PF01464 Transglycosylase SLT domain N175_11970 PF00005 ABC transporter N175_11970 PF12848 ABC transporter N175_11975 PF07238 PilZ domain N175_11980 PF01817 Chorismate mutase type II N175_11980 PF02153 Prephenate dehydrogenase N175_11985 PF00793 DAHP synthetase I family N175_11990 PF07694 5TMR of 5TMR-LYT N175_11990 PF06580 Histidine kinase N175_11995 PF04397 LytTr DNA-binding domain N175_11995 PF00072 Response regulator receiver domain N175_12000 PF00072 Response regulator receiver domain N175_12000 PF04397 LytTr DNA-binding domain N175_12005 PF00933 Glycosyl hydrolase family 3 N terminal domain N175_12010 PF03702 Anhydro-N-acetylmuramic acid kinase N175_12015 PF13580 SIS domain N175_12030 PF02554 Carbon starvation protein CstA N175_12035 PF02401 LytB protein N175_12040 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N175_12045 PF01252 Signal peptidase (SPase) II N175_12050 PF08264 Anticodon-binding domain of tRNA N175_12050 PF06827 Zinc finger found in FPG and IleRS N175_12050 PF00133 tRNA synthetases class I (I, L, M and V) N175_12055 PF01687 Riboflavin kinase N175_12055 PF06574 FAD synthetase N175_12060 PF03023 Lipid II flippase MurJ N175_12065 PF01649 Ribosomal protein S20 N175_12070 PF01022 Bacterial regulatory protein, arsR family N175_12075 PF03466 LysR substrate binding domain N175_12075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N175_12080 PF02690 Na+/Pi-cotransporter N175_12090 PF00303 Thymidylate synthase N175_12100 PF00665 Integrase core domain N175_12105 PF01527 Transposase N175_12125 PF13007 Transposase C of IS166 homeodomain N175_12125 PF13005 zinc-finger binding domain of transposase IS66 N175_12125 PF03050 Transposase IS66 family N175_12125 PF13817 IS66 C-terminal element N175_12185 PF13817 IS66 C-terminal element N175_12185 PF13007 Transposase C of IS166 homeodomain N175_12185 PF03050 Transposase IS66 family N175_12185 PF13005 zinc-finger binding domain of transposase IS66 N175_12250 PF00303 Thymidylate synthase N175_12255 PF01790 Prolipoprotein diacylglyceryl transferase N175_12260 PF01925 Sulfite exporter TauE/SafE N175_12265 PF05524 PEP-utilising enzyme, N-terminal N175_12265 PF00391 PEP-utilising enzyme, mobile domain N175_12265 PF02896 PEP-utilising enzyme, TIM barrel domain N175_12265 PF01590 GAF domain N175_12270 PF00293 NUDIX domain N175_12275 PF02976 DNA mismatch repair enzyme MutH N175_12280 PF00248 Aldo/keto reductase family N175_12290 PF00158 Sigma-54 interaction domain N175_12290 PF00072 Response regulator receiver domain N175_12290 PF02954 Bacterial regulatory protein, Fis family N175_12295 PF01336 OB-fold nucleic acid binding domain N175_12295 PF00152 tRNA synthetases class II (D, K and N) N175_12300 PF03462 PCRF domain N175_12300 PF00472 RF-1 domain N175_12305 PF05525 Branched-chain amino acid transport protein N175_12310 PF05175 Methyltransferase small domain N175_12315 PF00270 DEAD/DEAH box helicase N175_12315 PF00271 Helicase conserved C-terminal domain N175_12320 PF16658 Class II release factor RF3, C-terminal domain N175_12320 PF00009 Elongation factor Tu GTP binding domain N175_12320 PF03144 Elongation factor Tu domain 2 N175_12325 PF00990 Diguanylate cyclase, GGDEF domain N175_12325 PF00563 EAL domain N175_12325 PF03707 Bacterial signalling protein N terminal repeat N175_12330 PF00583 Acetyltransferase (GNAT) family N175_12345 PF13508 Acetyltransferase (GNAT) domain N175_12355 PF03707 Bacterial signalling protein N terminal repeat N175_12355 PF00563 EAL domain N175_12355 PF00990 Diguanylate cyclase, GGDEF domain N175_12375 PF01047 MarR family N175_12380 PF07719 Tetratricopeptide repeat N175_12380 PF13181 Tetratricopeptide repeat N175_12385 PF00013 KH domain N175_12385 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain N175_12385 PF01138 3' exoribonuclease family, domain 1 N175_12385 PF03725 3' exoribonuclease family, domain 2 N175_12385 PF00575 S1 RNA binding domain N175_12390 PF00312 Ribosomal protein S15 N175_12395 PF09157 Pseudouridine synthase II TruB, C-terminal N175_12395 PF01509 TruB family pseudouridylate synthase (N terminal domain) N175_12395 PF16198 tRNA pseudouridylate synthase B C-terminal domain N175_12400 PF02033 Ribosome-binding factor A N175_12405 PF04760 Translation initiation factor IF-2, N-terminal region N175_12405 PF00009 Elongation factor Tu GTP binding domain N175_12405 PF11987 Translation-initiation factor 2 N175_12405 PF08364 Bacterial translation initiation factor IF-2 associated region N175_12410 PF13184 NusA-like KH domain N175_12410 PF08529 NusA N-terminal domain N175_12410 PF00575 S1 RNA binding domain N175_12415 PF17384 RimP C-terminal SH3 domain N175_12415 PF02576 RimP N-terminal domain N175_12430 PF03840 Preprotein translocase SecG subunit N175_12435 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N175_12435 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N175_12435 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N175_12435 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N175_12440 PF00809 Pterin binding enzyme N175_12445 PF00004 ATPase family associated with various cellular activities (AAA) N175_12445 PF17862 AAA+ lid domain N175_12445 PF06480 FtsH Extracellular N175_12445 PF01434 Peptidase family M41 N175_12450 PF01728 FtsJ-like methyltransferase N175_12455 PF01985 CRS1 / YhbY (CRM) domain N175_12460 PF01272 Transcription elongation factor, GreA/GreB, C-term N175_12460 PF03449 Transcription elongation factor, N-terminal N175_12465 PF13609 Gram-negative porin N175_12470 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family N175_12475 PF03448 MgtE intracellular N domain N175_12475 PF01769 Divalent cation transporter N175_12475 PF00571 CBS domain N175_12485 PF00579 tRNA synthetases class I (W and Y) N175_12485 PF01479 S4 domain N175_12490 PF01551 Peptidase family M23 N175_12490 PF01476 LysM domain N175_12490 PF08525 Opacity-associated protein A N-terminal motif N175_12495 PF00873 AcrB/AcrD/AcrF family N175_12510 PF00202 Aminotransferase class-III N175_12520 PF01594 AI-2E family transporter N175_12525 PF05175 Methyltransferase small domain N175_12525 PF08468 Methyltransferase small domain N-terminal N175_12530 PF09308 LuxQ, periplasmic N175_12530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N175_12530 PF00512 His Kinase A (phospho-acceptor) domain N175_12530 PF00072 Response regulator receiver domain N175_12535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N175_12540 PF00528 Binding-protein-dependent transport system inner membrane component N175_12545 PF12911 N-terminal TM domain of oligopeptide transport permease C N175_12545 PF00528 Binding-protein-dependent transport system inner membrane component N175_12550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N175_12550 PF00005 ABC transporter N175_12555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N175_12555 PF00005 ABC transporter N175_12565 PF01869 BadF/BadG/BcrA/BcrD ATPase family N175_12570 PF02838 Glycosyl hydrolase family 20, domain 2 N175_12570 PF00728 Glycosyl hydrolase family 20, catalytic domain N175_12575 PF06165 Glycosyltransferase family 36 N175_12575 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain N175_12580 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N175_12580 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N175_12580 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N175_12585 PF08402 TOBE domain N175_12585 PF00005 ABC transporter N175_12595 PF13416 Bacterial extracellular solute-binding protein N175_12600 PF00909 Ammonium Transporter Family N175_12605 PF00543 Nitrogen regulatory protein P-II N175_12610 PF06062 Uncharacterised protein family (UPF0231) N175_12615 PF05651 Putative sugar diacid recognition N175_12615 PF17853 GGDEF-like domain N175_12615 PF13556 PucR C-terminal helix-turn-helix domain N175_12620 PF02447 GntP family permease N175_12625 PF02595 Glycerate kinase family N175_12630 PF11791 Aconitate B N-terminal domain N175_12630 PF06434 Aconitate hydratase 2 N-terminus N175_12630 PF00330 Aconitase family (aconitate hydratase) N175_12635 PF01734 Patatin-like phospholipase N175_12640 PF00905 Penicillin binding protein transpeptidase domain N175_12640 PF14814 Bifunctional transglycosylase second domain N175_12640 PF00912 Transglycosylase N175_12645 PF08482 ATP-dependent helicase C-terminal N175_12645 PF04408 Helicase associated domain (HA2) N175_12645 PF00271 Helicase conserved C-terminal domain N175_12645 PF00270 DEAD/DEAH box helicase N175_12650 PF03749 Sugar fermentation stimulation protein RE domain N175_12650 PF17746 SfsA N-terminal OB domain N175_12655 PF01258 Prokaryotic dksA/traR C4-type zinc finger N175_12660 PF00749 tRNA synthetases class I (E and Q), catalytic domain N175_12665 PF12627 Probable RNA and SrmB- binding site of polymerase A N175_12665 PF12626 Polymerase A arginine-rich C-terminus N175_12665 PF01743 Poly A polymerase head domain N175_12670 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) N175_12675 PF02548 Ketopantoate hydroxymethyltransferase N175_12680 PF02569 Pantoate-beta-alanine ligase N175_12690 PF01061 ABC-2 type transporter N175_12695 PF00005 ABC transporter N175_12700 PF01740 STAS domain N175_12700 PF00916 Sulfate permease family N175_12705 PF00484 Carbonic anhydrase N175_12710 PF00156 Phosphoribosyl transferase domain N175_12715 PF00440 Bacterial regulatory proteins, tetR family N175_12720 PF07992 Pyridine nucleotide-disulphide oxidoreductase N175_12720 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N175_12725 PF00364 Biotin-requiring enzyme N175_12725 PF02817 e3 binding domain N175_12725 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) N175_12730 PF00456 Transketolase, thiamine diphosphate binding domain N175_12730 PF17831 Pyruvate dehydrogenase E1 component middle domain N175_12735 PF00392 Bacterial regulatory proteins, gntR family N175_12735 PF07729 FCD domain N175_12740 PF01368 DHH family N175_12740 PF02272 DHHA1 domain N175_12740 PF17768 RecJ OB domain N175_12745 PF10411 Disulfide bond isomerase protein N-terminus N175_12745 PF13098 Thioredoxin-like domain N175_12750 PF02899 Phage integrase, N-terminal SAM-like domain N175_12750 PF00589 Phage integrase family N175_12755 PF00258 Flavodoxin N175_12760 PF01510 N-acetylmuramoyl-L-alanine amidase N175_12765 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain N175_12765 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain N175_12785 PF00482 Type II secretion system (T2SS), protein F N175_12790 PF06750 Bacterial Peptidase A24 N-terminal domain N175_12790 PF01478 Type IV leader peptidase family N175_12795 PF01121 Dephospho-CoA kinase N175_12800 PF07072 Cell division protein N175_12805 PF03884 DNA gyrase inhibitor YacG N175_12810 PF01245 Ribosomal protein L19 N175_12815 PF01746 tRNA (Guanine-1)-methyltransferase N175_12830 PF02978 Signal peptide binding domain N175_12830 PF00448 SRP54-type protein, GTPase domain N175_12830 PF02881 SRP54-type protein, helical bundle domain N175_12835 PF01578 Cytochrome C assembly protein N175_12840 PF03471 Transporter associated domain N175_12840 PF01595 Cyclin M transmembrane N-terminal domain N175_12840 PF00571 CBS domain N175_12850 PF04262 Glutamate-cysteine ligase N175_12855 PF05193 Peptidase M16 inactive domain N175_12855 PF00675 Insulinase (Peptidase family M16) N175_12860 PF09335 SNARE associated Golgi protein N175_12865 PF00107 Zinc-binding dehydrogenase N175_12865 PF08240 Alcohol dehydrogenase GroES-like domain N175_12870 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit N175_12875 PF00682 HMGL-like N175_12875 PF02436 Conserved carboxylase domain N175_12875 PF00364 Biotin-requiring enzyme N175_12880 PF04277 Oxaloacetate decarboxylase, gamma chain N175_12930 PF13840 ACT domain N175_12930 PF00696 Amino acid kinase family N175_12930 PF01842 ACT domain N175_12935 PF01411 tRNA synthetases class II (A) N175_12935 PF02272 DHHA1 domain N175_12935 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain N175_12940 PF02631 RecX family N175_12945 PF00154 recA bacterial DNA recombination protein N175_12950 PF02464 Competence-damaged protein N175_12955 PF00005 ABC transporter N175_12955 PF12857 TOBE-like domain N175_12960 PF00528 Binding-protein-dependent transport system inner membrane component N175_12965 PF00528 Binding-protein-dependent transport system inner membrane component N175_12975 PF00291 Pyridoxal-phosphate dependent enzyme N175_12980 PF00488 MutS domain V N175_12980 PF05188 MutS domain II N175_12980 PF05192 MutS domain III N175_12980 PF01624 MutS domain I N175_12980 PF05190 MutS family domain IV N175_12985 PF04542 Sigma-70 region 2 N175_12985 PF04545 Sigma-70, region 4 N175_12985 PF00140 Sigma-70 factor, region 1.2 N175_12985 PF04539 Sigma-70 region 3 N175_12990 PF01551 Peptidase family M23 N175_12990 PF01476 LysM domain N175_13000 PF01975 Survival protein SurE N175_13005 PF01142 tRNA pseudouridine synthase D (TruD) N175_13010 PF02542 YgbB family N175_13015 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase N175_13020 PF04977 Septum formation initiator N175_13025 PF02673 Bacitracin resistance protein BacA N175_13030 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) N175_13035 PF02152 Dihydroneopterin aldolase N175_13040 PF02660 Glycerol-3-phosphate acyltransferase N175_13060 PF09424 Yqey-like protein N175_13065 PF10410 DnaB-helicase binding domain of primase N175_13065 PF08275 DNA primase catalytic core, N-terminal domain N175_13065 PF01807 CHC2 zinc finger N175_13065 PF08278 DNA primase DnaG DnaB-binding N175_13070 PF04545 Sigma-70, region 4 N175_13070 PF04539 Sigma-70 region 3 N175_13070 PF04546 Sigma-70, non-essential region N175_13070 PF00140 Sigma-70 factor, region 1.2 N175_13070 PF03979 Sigma-70 factor, region 1.1 N175_13070 PF04542 Sigma-70 region 2 N175_13085 PF13657 HipA N-terminal domain N175_13085 PF07804 HipA-like C-terminal domain N175_13105 PF00580 UvrD/REP helicase N-terminal domain N175_13105 PF13361 UvrD-like helicase C-terminal domain N175_13135 PF13333 Integrase core domain N175_13135 PF13276 HTH-like domain N175_13135 PF00665 Integrase core domain N175_13210 PF13276 HTH-like domain N175_13210 PF00665 Integrase core domain N175_13210 PF13333 Integrase core domain N175_13215 PF12161 HsdM N-terminal domain N175_13215 PF02384 N-6 DNA Methylase N175_13220 PF01420 Type I restriction modification DNA specificity domain N175_13235 PF00239 Resolvase, N terminal domain N175_13235 PF02796 Helix-turn-helix domain of resolvase N175_13275 PF00665 Integrase core domain N175_13280 PF01695 IstB-like ATP binding protein N175_13305 PF15935 RNase LS, bacterial toxin N175_13310 PF15933 Antitoxin to bacterial toxin RNase LS or RnlA N175_13315 PF00589 Phage integrase family N175_13315 PF02899 Phage integrase, N-terminal SAM-like domain N175_13360 PF01527 Transposase N175_13365 PF00665 Integrase core domain N175_13430 PF16671 Actin cross-linking domain N175_13430 PF04717 Type VI secretion system, phage-baseplate injector N175_13435 PF05638 Type VI secretion system effector, Hcp N175_13440 PF00472 RF-1 domain N175_13450 PF02368 Bacterial Ig-like domain (group 2) N175_13450 PF11999 Protein of unknown function (DUF3494) N175_13455 PF01380 SIS domain N175_13460 PF00455 DeoR C terminal sensor domain N175_13460 PF08220 DeoR-like helix-turn-helix domain N175_13475 PF02887 Pyruvate kinase, alpha/beta domain N175_13475 PF00224 Pyruvate kinase, barrel domain N175_13480 PF00990 Diguanylate cyclase, GGDEF domain N175_13480 PF17158 Membrane-associated sensor, integral membrane domain N175_13490 PF03466 LysR substrate binding domain N175_13490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N175_13495 PF01810 LysE type translocator N175_13500 PF00924 Mechanosensitive ion channel N175_13500 PF05552 Conserved TM helix N175_13505 PF01116 Fructose-bisphosphate aldolase class-II N175_13510 PF00162 Phosphoglycerate kinase N175_13515 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain N175_13515 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain N175_13520 PF00593 TonB dependent receptor N175_13520 PF07715 TonB-dependent Receptor Plug Domain N175_13525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N175_13525 PF03466 LysR substrate binding domain N175_13530 PF00438 S-adenosylmethionine synthetase, N-terminal domain N175_13530 PF02773 S-adenosylmethionine synthetase, C-terminal domain N175_13530 PF02772 S-adenosylmethionine synthetase, central domain N175_13535 PF10263 SprT-like family N175_13535 PF17283 SprT-like zinc ribbon domain N175_13540 PF04231 Endonuclease I N175_13545 PF04452 RNA methyltransferase N175_13550 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain N175_13550 PF02951 Prokaryotic glutathione synthetase, N-terminal domain N175_13555 PF02622 Uncharacterized ACR, COG1678 N175_13560 PF03652 Holliday junction resolvase N175_13565 PF00437 Type II/IV secretion system protein N175_13570 PF00437 Type II/IV secretion system protein N175_13575 PF01168 Alanine racemase, N-terminal domain N175_13580 PF03807 NADP oxidoreductase coenzyme F420-dependent N175_13580 PF14748 Pyrroline-5-carboxylate reductase dimerisation N175_13585 PF02325 YGGT family N175_13590 PF02594 Uncharacterised ACR, YggU family COG1872 N175_13600 PF01725 Ham1 family N175_13605 PF04055 Radical SAM superfamily N175_13605 PF06969 HemN C-terminal domain N175_13610 PF04960 Glutaminase N175_13615 PF02390 Putative methyltransferase N175_13620 PF00633 Helix-hairpin-helix motif N175_13620 PF00730 HhH-GPD superfamily base excision DNA repair protein N175_13620 PF14815 NUDIX domain N175_13625 PF04362 Bacterial Fe(2+) trafficking N175_13630 PF01464 Transglycosylase SLT domain N175_13630 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain N175_13680 PF05099 Tellurite resistance protein TerB N175_13680 PF00226 DnaJ domain N175_13685 PF05099 Tellurite resistance protein TerB N175_13685 PF00226 DnaJ domain N175_13695 PF09312 SurA N-terminal domain N175_13700 PF04166 Pyridoxal phosphate biosynthetic protein PdxA N175_13705 PF00398 Ribosomal RNA adenine dimethylase N175_13710 PF04379 ApaG domain N175_13715 PF00149 Calcineurin-like phosphoesterase N175_13720 PF00186 Dihydrofolate reductase N175_13725 PF12821 Threonine/Serine exporter, ThrE N175_13730 PF06738 Putative threonine/serine exporter N175_13735 PF01926 50S ribosome-binding GTPase N175_13735 PF01018 GTP1/OBG N175_13740 PF01016 Ribosomal L27 protein N175_13750 PF00348 Polyprenyl synthetase N175_13755 PF13520 Amino acid permease N175_13760 PF00056 lactate/malate dehydrogenase, NAD binding domain N175_13760 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain N175_13775 PF16868 NMT1-like family N175_13785 PF00582 Universal stress protein family N175_13910 PF01523 Putative modulator of DNA gyrase N175_13915 PF00795 Carbon-nitrogen hydrolase N175_13920 PF13502 AsmA-like C-terminal region N175_13920 PF13116 Protein of unknown function N175_13925 PF00575 S1 RNA binding domain N175_13925 PF10150 Ribonuclease E/G family N175_13935 PF04093 rod shape-determining protein MreD N175_13940 PF04085 rod shape-determining protein MreC N175_13980 PF07963 Prokaryotic N-terminal methylation motif N175_13980 PF00114 Pilin (bacterial filament) N175_13990 PF00482 Type II secretion system (T2SS), protein F N175_13995 PF00437 Type II/IV secretion system protein N175_13995 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain N175_14005 PF13401 AAA domain N175_14005 PF01471 Putative peptidoglycan binding domain N175_14010 PF03958 Bacterial type II/III secretion system short domain N175_14010 PF00263 Bacterial type II and III secretion system protein N175_14030 PF00990 Diguanylate cyclase, GGDEF domain N175_14030 PF17157 Gammaproteobacterial periplasmic sensor domain N175_14030 PF00563 EAL domain N175_14035 PF00436 Single-strand binding protein family N175_14040 PF00196 Bacterial regulatory proteins, luxR family N175_14045 PF00483 Nucleotidyl transferase N175_14050 PF17755 UvrA DNA-binding domain N175_14050 PF00005 ABC transporter N175_14050 PF17760 UvrA interaction domain N175_14060 PF00571 CBS domain N175_14060 PF01769 Divalent cation transporter N175_14060 PF03448 MgtE intracellular N domain N175_14075 PF00266 Aminotransferase class-V N175_14080 PF01842 ACT domain N175_14080 PF00696 Amino acid kinase family N175_14085 PF02574 Homocysteine S-methyltransferase N175_14085 PF02965 Vitamin B12 dependent methionine synthase, activation domain N175_14085 PF02607 B12 binding domain N175_14085 PF00809 Pterin binding enzyme N175_14085 PF02310 B12 binding domain N175_14090 PF00999 Sodium/hydrogen exchanger family N175_14120 PF01507 Phosphoadenosine phosphosulfate reductase family N175_14125 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain N175_14125 PF01077 Nitrite and sulphite reductase 4Fe-4S domain N175_14130 PF00175 Oxidoreductase NAD-binding domain N175_14130 PF00258 Flavodoxin N175_14130 PF00667 FAD binding domain N175_14150 PF01207 Dihydrouridine synthase (Dus) N175_14155 PF01475 Ferric uptake regulator family N175_14165 PF00342 Phosphoglucose isomerase N175_14170 PF00842 Alanine racemase, C-terminal domain N175_14170 PF01168 Alanine racemase, N-terminal domain N175_14175 PF00772 DnaB-like helicase N terminal domain N175_14175 PF03796 DnaB-like helicase C terminal domain N175_14185 PF03948 Ribosomal protein L9, C-terminal domain N175_14185 PF01281 Ribosomal protein L9, N-terminal domain N175_14190 PF01084 Ribosomal protein S18 N175_14195 PF00436 Single-strand binding protein family N175_14200 PF01250 Ribosomal protein S6 N175_14205 PF03144 Elongation factor Tu domain 2 N175_14205 PF03143 Elongation factor Tu C-terminal domain N175_14205 PF00009 Elongation factor Tu GTP binding domain N175_14210 PF03764 Elongation factor G, domain IV N175_14210 PF00679 Elongation factor G C-terminus N175_14210 PF00009 Elongation factor Tu GTP binding domain N175_14210 PF03144 Elongation factor Tu domain 2 N175_14210 PF14492 Elongation Factor G, domain II N175_14215 PF00177 Ribosomal protein S7p/S5e N175_14220 PF00164 Ribosomal protein S12/S23 N175_14225 PF04077 DsrH like protein N175_14230 PF02635 DsrE/DsrF-like family N175_14235 PF02635 DsrE/DsrF-like family N175_14240 PF13309 HTH domain N175_14240 PF08348 YheO-like PAS domain N175_14245 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N175_14245 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase N175_14255 PF04102 SlyX N175_14260 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) N175_14265 PF01145 SPFH domain / Band 7 family N175_14270 PF12221 Bacterial membrane protein N terminal N175_14270 PF01145 SPFH domain / Band 7 family N175_14275 PF16360 GTP-binding GTPase Middle Region N175_14275 PF01926 50S ribosome-binding GTPase N175_14275 PF13167 GTP-binding GTPase N-terminal N175_14280 PF17209 Hfq protein N175_14290 PF01119 DNA mismatch repair protein, C-terminal domain N175_14290 PF08676 MutL C terminal dimerisation domain N175_14295 PF01520 N-acetylmuramoyl-L-alanine amidase N175_14300 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE N175_14320 PF00929 Exonuclease N175_14325 PF03193 RsgA GTPase N175_14330 PF02666 Phosphatidylserine decarboxylase N175_14335 PF02080 TrkA-C domain N175_14335 PF03600 Citrate transporter N175_14340 PF00672 HAMP domain N175_14340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N175_14340 PF02743 Cache domain N175_14350 PF01676 Metalloenzyme superfamily N175_14350 PF06415 BPG-independent PGAM N-terminus (iPGM_N) N175_14355 PF01551 Peptidase family M23 N175_14365 PF08360 QacR-like protein, C-terminal region N175_14365 PF00440 Bacterial regulatory proteins, tetR family N175_14370 PF01208 Uroporphyrinogen decarboxylase (URO-D) N175_14375 PF00293 NUDIX domain N175_14375 PF09297 NADH pyrophosphatase zinc ribbon domain N175_14380 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ N175_14385 PF04998 RNA polymerase Rpb1, domain 5 N175_14385 PF05000 RNA polymerase Rpb1, domain 4 N175_14385 PF04983 RNA polymerase Rpb1, domain 3 N175_14385 PF00623 RNA polymerase Rpb1, domain 2 N175_14385 PF04997 RNA polymerase Rpb1, domain 1 N175_14390 PF10385 RNA polymerase beta subunit external 1 domain N175_14390 PF04563 RNA polymerase beta subunit N175_14390 PF04565 RNA polymerase Rpb2, domain 3 N175_14390 PF00562 RNA polymerase Rpb2, domain 6 N175_14390 PF04560 RNA polymerase Rpb2, domain 7 N175_14390 PF04561 RNA polymerase Rpb2, domain 2 N175_14395 PF00542 Ribosomal protein L7/L12 C-terminal domain N175_14395 PF16320 Ribosomal protein L7/L12 dimerisation domain N175_14400 PF00466 Ribosomal protein L10 N175_14405 PF00687 Ribosomal protein L1p/L10e family N175_14410 PF03946 Ribosomal protein L11, N-terminal domain N175_14410 PF00298 Ribosomal protein L11, RNA binding domain N175_14415 PF00467 KOW motif N175_14415 PF02357 Transcription termination factor nusG N175_14420 PF00584 SecE/Sec61-gamma subunits of protein translocation complex N175_14425 PF00009 Elongation factor Tu GTP binding domain N175_14425 PF03144 Elongation factor Tu domain 2 N175_14425 PF03143 Elongation factor Tu C-terminal domain N175_14450 PF00485 Phosphoribulokinase / Uridine kinase family N175_14455 PF02237 Biotin protein ligase C terminal domain N175_14455 PF03099 Biotin/lipoate A/B protein ligase family N175_14455 PF08279 HTH domain N175_14460 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain N175_14460 PF01565 FAD binding domain N175_14470 PF13091 PLD-like domain N175_14555 PF13007 Transposase C of IS166 homeodomain N175_14555 PF03050 Transposase IS66 family N175_14555 PF13817 IS66 C-terminal element N175_14555 PF13005 zinc-finger binding domain of transposase IS66 N175_14580 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) N175_14620 PF13737 Transposase DDE domain N175_14640 PF13276 HTH-like domain N175_14640 PF13333 Integrase core domain N175_14640 PF00665 Integrase core domain N175_14645 PF01527 Transposase N175_14705 PF01253 Translation initiation factor SUI1 N175_14720 PF01820 D-ala D-ala ligase N-terminus N175_14720 PF07478 D-ala D-ala ligase C-terminus N175_14730 PF13380 CoA binding domain N175_14730 PF13607 Succinyl-CoA ligase like flavodoxin domain N175_14730 PF00583 Acetyltransferase (GNAT) family N175_14735 PF03466 LysR substrate binding domain N175_14735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N175_14750 PF03701 Uncharacterised protein family (UPF0181) N175_14765 PF00072 Response regulator receiver domain N175_14765 PF00486 Transcriptional regulatory protein, C terminal N175_14775 PF02233 NAD(P) transhydrogenase beta subunit N175_14780 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch N175_14780 PF05222 Alanine dehydrogenase/PNT, N-terminal domain N175_14780 PF01262 Alanine dehydrogenase/PNT, C-terminal domain N175_14795 PF00990 Diguanylate cyclase, GGDEF domain N175_14800 PF00313 'Cold-shock' DNA-binding domain N175_14810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N175_14810 PF17200 Single Cache domain 2 N175_14810 PF00672 HAMP domain N175_14830 PF00043 Glutathione S-transferase, C-terminal domain N175_14830 PF02798 Glutathione S-transferase, N-terminal domain N175_14845 PF00132 Bacterial transferase hexapeptide (six repeats) N175_14845 PF12804 MobA-like NTP transferase domain N175_14845 PF03479 Plants and Prokaryotes Conserved (PCC) domain N175_14850 PF12848 ABC transporter N175_14850 PF00005 ABC transporter N175_14855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N175_14855 PF12793 Sugar transport-related sRNA regulator N-term N175_14865 PF03061 Thioesterase superfamily N175_14875 PF08274 PhnA Zinc-Ribbon N175_14875 PF03831 PhnA domain N175_14885 PF03741 Integral membrane protein TerC family N175_14890 PF02872 5'-nucleotidase, C-terminal domain N175_14890 PF00149 Calcineurin-like phosphoesterase N175_14895 PF11398 Protein of unknown function (DUF2813) N175_14900 PF06496 Protein of unknown function (DUF1097) N175_14905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N175_14905 PF03466 LysR substrate binding domain N175_14910 PF01226 Formate/nitrite transporter N175_14920 PF00854 POT family N175_14930 PF07702 UTRA domain N175_14930 PF00392 Bacterial regulatory proteins, gntR family N175_14935 PF01272 Transcription elongation factor, GreA/GreB, C-term N175_14935 PF14760 Rnk N-terminus N175_14940 PF13419 Haloacid dehalogenase-like hydrolase N175_14950 PF11953 Domain of unknown function (DUF3470) N175_14950 PF00037 4Fe-4S binding domain N175_14955 PF00588 SpoU rRNA Methylase family N175_14955 PF08032 RNA 2'-O ribose methyltransferase substrate binding N175_14965 PF01268 Formate--tetrahydrofolate ligase N175_14970 PF01625 Peptide methionine sulfoxide reductase N175_14970 PF01641 SelR domain N175_14975 PF01227 GTP cyclohydrolase I N175_14980 PF03454 MoeA C-terminal region (domain IV) N175_14980 PF03453 MoeA N-terminal region (domain I and II) N175_14980 PF00994 Probable molybdopterin binding domain N175_14985 PF00899 ThiF family N175_14990 PF00581 Rhodanese-like domain N175_14995 PF00704 Glycosyl hydrolases family 18 N175_14995 PF08329 Chitinase A, N-terminal domain N175_15005 PF00923 Transaldolase/Fructose-6-phosphate aldolase N175_15010 PF02779 Transketolase, pyrimidine binding domain N175_15010 PF02780 Transketolase, C-terminal domain N175_15010 PF00456 Transketolase, thiamine diphosphate binding domain N175_15025 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase N175_15025 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N175_15030 PF13419 Haloacid dehalogenase-like hydrolase N175_15035 PF12729 Four helix bundle sensory module for signal transduction N175_15035 PF00672 HAMP domain N175_15035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N175_15040 PF04264 YceI-like domain N175_15045 PF01292 Prokaryotic cytochrome b561 N175_15055 PF00990 Diguanylate cyclase, GGDEF domain N175_15055 PF00360 Phytochrome region N175_15055 PF01590 GAF domain N175_15055 PF00563 EAL domain N175_15060 PF00005 ABC transporter N175_15060 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N175_15065 PF12911 N-terminal TM domain of oligopeptide transport permease C N175_15065 PF00528 Binding-protein-dependent transport system inner membrane component N175_15070 PF00528 Binding-protein-dependent transport system inner membrane component N175_15075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N175_15090 PF08443 RimK-like ATP-grasp domain N175_15090 PF18030 RimK PreATP-grasp domain N175_15095 PF00155 Aminotransferase class I and II N175_15105 PF13597 Anaerobic ribonucleoside-triphosphate reductase N175_15105 PF03477 ATP cone domain N175_15110 PF07694 5TMR of 5TMR-LYT N175_15110 PF00990 Diguanylate cyclase, GGDEF domain N175_15115 PF00873 AcrB/AcrD/AcrF family N175_15120 PF00529 HlyD membrane-fusion protein of T1SS N175_15120 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N175_15130 PF04143 Sulphur transport N175_15145 PF00158 Sigma-54 interaction domain N175_15145 PF00072 Response regulator receiver domain N175_15145 PF02954 Bacterial regulatory protein, Fis family N175_15150 PF00563 EAL domain N175_15150 PF00990 Diguanylate cyclase, GGDEF domain N175_15150 PF03707 Bacterial signalling protein N terminal repeat N175_15150 PF13188 PAS domain N175_15155 PF00512 His Kinase A (phospho-acceptor) domain N175_15155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N175_15160 PF00512 His Kinase A (phospho-acceptor) domain N175_15160 PF00989 PAS fold N175_15160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N175_15170 PF00072 Response regulator receiver domain N175_15185 PF00360 Phytochrome region N175_15185 PF00990 Diguanylate cyclase, GGDEF domain N175_15185 PF01590 GAF domain N175_15185 PF00563 EAL domain N175_15195 PF00005 ABC transporter N175_15195 PF03459 TOBE domain N175_15200 PF00528 Binding-protein-dependent transport system inner membrane component N175_15210 PF07685 CobB/CobQ-like glutamine amidotransferase domain N175_15210 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain N175_15215 PF04076 Bacterial OB fold (BOF) protein N175_15225 PF13426 PAS domain N175_15225 PF00563 EAL domain N175_15225 PF08448 PAS fold N175_15225 PF05231 MASE1 N175_15225 PF08447 PAS fold N175_15225 PF00990 Diguanylate cyclase, GGDEF domain N175_15230 PF00483 Nucleotidyl transferase N175_15235 PF00704 Glycosyl hydrolases family 18 N175_15235 PF06483 Chitinase C N175_15240 PF12833 Helix-turn-helix domain N175_15240 PF06719 AraC-type transcriptional regulator N-terminus N175_15245 PF00465 Iron-containing alcohol dehydrogenase N175_15250 PF02954 Bacterial regulatory protein, Fis family N175_15250 PF00072 Response regulator receiver domain N175_15250 PF14532 Sigma-54 interaction domain N175_15255 PF00672 HAMP domain N175_15255 PF00512 His Kinase A (phospho-acceptor) domain N175_15255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N175_15265 PF07690 Major Facilitator Superfamily N175_15270 PF00224 Pyruvate kinase, barrel domain N175_15270 PF02887 Pyruvate kinase, alpha/beta domain N175_15275 PF00512 His Kinase A (phospho-acceptor) domain N175_15275 PF00072 Response regulator receiver domain N175_15275 PF00672 HAMP domain N175_15275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N175_15275 PF01627 Hpt domain N175_15280 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family N175_15285 PF02142 MGS-like domain N175_15290 PF12462 DNA helicase IV / RNA helicase N terminal N175_15290 PF13361 UvrD-like helicase C-terminal domain N175_15290 PF00580 UvrD/REP helicase N-terminal domain N175_15295 PF12805 FUSC-like inner membrane protein yccS N175_15315 PF16901 C-terminal domain of alpha-glycerophosphate oxidase N175_15315 PF01266 FAD dependent oxidoreductase N175_15325 PF00072 Response regulator receiver domain N175_15325 PF09308 LuxQ, periplasmic N175_15325 PF00512 His Kinase A (phospho-acceptor) domain N175_15325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N175_15330 PF13407 Periplasmic binding protein domain N175_15340 PF01541 GIY-YIG catalytic domain N175_15355 PF04363 Protein of unknown function (DUF496) N175_15365 PF02782 FGGY family of carbohydrate kinases, C-terminal domain N175_15365 PF00370 FGGY family of carbohydrate kinases, N-terminal domain N175_15370 PF00230 Major intrinsic protein N175_15375 PF01266 FAD dependent oxidoreductase N175_15375 PF04324 BFD-like [2Fe-2S] binding domain N175_15380 PF00890 FAD binding domain N175_15385 PF02754 Cysteine-rich domain N175_15385 PF13183 4Fe-4S dicluster domain N175_15390 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III N175_15390 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal N175_15395 PF00085 Thioredoxin N175_15400 PF07690 Major Facilitator Superfamily N175_15405 PF11756 Nitrous oxide-stimulated promoter N175_15415 PF01513 ATP-NAD kinase N175_15420 PF10414 Sirohaem synthase dimerisation region N175_15420 PF14824 Sirohaem biosynthesis protein central N175_15420 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases N175_15430 PF13806 Rieske-like [2Fe-2S] domain N175_15435 PF04324 BFD-like [2Fe-2S] binding domain N175_15435 PF18267 Rubredoxin NAD+ reductase C-terminal domain N175_15435 PF07992 Pyridine nucleotide-disulphide oxidoreductase N175_15435 PF01077 Nitrite and sulphite reductase 4Fe-4S domain N175_15435 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain N175_15445 PF13977 BetI-type transcriptional repressor, C-terminal N175_15445 PF00440 Bacterial regulatory proteins, tetR family N175_15450 PF00171 Aldehyde dehydrogenase family N175_15455 PF00732 GMC oxidoreductase N175_15455 PF05199 GMC oxidoreductase N175_15460 PF04069 Substrate binding domain of ABC-type glycine betaine transport system N175_15465 PF00528 Binding-protein-dependent transport system inner membrane component N175_15470 PF00005 ABC transporter N175_15470 PF00571 CBS domain N175_15485 PF05762 VWA domain containing CoxE-like protein N175_15490 PF07728 AAA domain (dynein-related subfamily) N175_15490 PF17868 AAA lid domain N175_15490 PF12592 Protein of unknown function (DUF3763) N175_15500 PF01212 Beta-eliminating lyase N175_15510 PF00271 Helicase conserved C-terminal domain N175_15510 PF00270 DEAD/DEAH box helicase N175_15520 PF03222 Tryptophan/tyrosine permease family N175_15525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N175_15525 PF00672 HAMP domain N175_15530 PF16363 GDP-mannose 4,6 dehydratase N175_15535 PF03746 LamB/YcsF family N175_15545 PF02626 Carboxyltransferase domain, subdomain A and B N175_15560 PF00005 ABC transporter N175_15565 PF13472 GDSL-like Lipase/Acylhydrolase family N175_15570 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase N175_15570 PF12241 Trans-2-enoyl-CoA reductase catalytic region N175_15570 PF07055 Enoyl reductase FAD binding domain N175_15575 PF00498 FHA domain N175_15575 PF00990 Diguanylate cyclase, GGDEF domain N175_15575 PF00563 EAL domain N175_15585 PF01556 DnaJ C terminal domain N175_15585 PF00226 DnaJ domain N175_15585 PF00684 DnaJ central domain N175_15595 PF13419 Haloacid dehalogenase-like hydrolase N175_15600 PF11849 Domain of unknown function (DUF3369) N175_15605 PF04986 Putative transposase N175_15605 PF14319 Transposase zinc-binding domain N175_15625 PF00294 pfkB family carbohydrate kinase N175_15630 PF13188 PAS domain N175_15630 PF00990 Diguanylate cyclase, GGDEF domain N175_15630 PF03707 Bacterial signalling protein N terminal repeat N175_15630 PF00563 EAL domain N175_15635 PF00194 Eukaryotic-type carbonic anhydrase N175_15645 PF00672 HAMP domain N175_15645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N175_15645 PF02743 Cache domain N175_15650 PF00491 Arginase family N175_15655 PF17944 Arginine decarboxylase C-terminal helical extension N175_15655 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain N175_15655 PF17810 Arginine decarboxylase helical bundle domain N175_15665 PF00005 ABC transporter N175_15665 PF00571 CBS domain N175_15670 PF00528 Binding-protein-dependent transport system inner membrane component N175_15675 PF04069 Substrate binding domain of ABC-type glycine betaine transport system N175_15695 PF03448 MgtE intracellular N domain N175_15695 PF01769 Divalent cation transporter N175_15695 PF00571 CBS domain N175_15700 PF13840 ACT domain N175_15700 PF00696 Amino acid kinase family N175_15705 PF06339 Ectoine synthase N175_15710 PF00202 Aminotransferase class-III N175_15715 PF00583 Acetyltransferase (GNAT) family N175_15725 PF01467 Cytidylyltransferase-like N175_15730 PF02540 NAD synthase N175_15765 PF00672 HAMP domain N175_15765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N175_15765 PF02743 Cache domain N175_15770 PF00128 Alpha amylase, catalytic domain N175_15785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N175_15785 PF02743 Cache domain N175_15785 PF00672 HAMP domain N175_15790 PF07726 ATPase family associated with various cellular activities (AAA) N175_15790 PF17863 AAA lid domain N175_15795 PF01882 Protein of unknown function DUF58 N175_15810 PF13519 von Willebrand factor type A domain N175_15825 PF00990 Diguanylate cyclase, GGDEF domain N175_15835 PF01844 HNH endonuclease N175_15840 PF12843 Putative quorum-sensing-regulated virulence factor N175_15845 PF00884 Sulfatase N175_15855 PF01219 Prokaryotic diacylglycerol kinase N175_15860 PF00107 Zinc-binding dehydrogenase N175_15860 PF08240 Alcohol dehydrogenase GroES-like domain N175_15865 PF00155 Aminotransferase class I and II N175_15870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N175_15870 PF03466 LysR substrate binding domain N175_15875 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N175_15885 PF07690 Major Facilitator Superfamily N175_15890 PF00072 Response regulator receiver domain N175_15890 PF00196 Bacterial regulatory proteins, luxR family N175_15900 PF07690 Major Facilitator Superfamily N175_15920 PF04013 Putative SAM-dependent RNA methyltransferase N175_15935 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain N175_15935 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain N175_15940 PF01022 Bacterial regulatory protein, arsR family N175_15945 PF01758 Sodium Bile acid symporter family N175_15960 PF00916 Sulfate permease family N175_15960 PF01740 STAS domain N175_15965 PF00582 Universal stress protein family N175_15970 PF17327 Acyl homoserine lactone synthase N175_15975 PF00072 Response regulator receiver domain N175_15975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N175_15980 PF00478 IMP dehydrogenase / GMP reductase domain N175_15985 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N175_15985 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N175_16015 PF00313 'Cold-shock' DNA-binding domain N175_16020 PF07152 YaeQ protein N175_16030 PF00175 Oxidoreductase NAD-binding domain N175_16030 PF00042 Globin N175_16030 PF00970 Oxidoreductase FAD-binding domain N175_16035 PF00158 Sigma-54 interaction domain N175_16035 PF01590 GAF domain N175_16050 PF07670 Nucleoside recognition N175_16050 PF07662 Na+ dependent nucleoside transporter C-terminus N175_16050 PF01773 Na+ dependent nucleoside transporter N-terminus N175_16055 PF03476 MOSC N-terminal beta barrel domain N175_16055 PF00111 2Fe-2S iron-sulfur cluster binding domain N175_16055 PF03473 MOSC domain N175_16065 PF05958 tRNA (Uracil-5-)-methyltransferase N175_16070 PF05661 Protein of unknown function (DUF808) N175_16100 PF00196 Bacterial regulatory proteins, luxR family N175_16100 PF00072 Response regulator receiver domain N175_16110 PF13737 Transposase DDE domain N175_16130 PF17151 Periplasmic sensor domain N175_16130 PF00990 Diguanylate cyclase, GGDEF domain N175_16135 PF08220 DeoR-like helix-turn-helix domain N175_16135 PF00455 DeoR C terminal sensor domain N175_16140 PF03472 Autoinducer binding domain N175_16140 PF00196 Bacterial regulatory proteins, luxR family N175_16145 PF00765 Autoinducer synthase N175_16160 PF00528 Binding-protein-dependent transport system inner membrane component N175_16165 PF14785 Maltose transport system permease protein MalF P2 domain N175_16165 PF00528 Binding-protein-dependent transport system inner membrane component N175_16170 PF01547 Bacterial extracellular solute-binding protein N175_16175 PF00005 ABC transporter N175_16175 PF08402 TOBE domain N175_16180 PF00196 Bacterial regulatory proteins, luxR family N175_16190 PF00072 Response regulator receiver domain N175_16190 PF01584 CheW-like domain N175_16195 PF04237 YjbR N175_16200 PF00990 Diguanylate cyclase, GGDEF domain N175_16215 PF03707 Bacterial signalling protein N terminal repeat N175_16215 PF00563 EAL domain N175_16215 PF00990 Diguanylate cyclase, GGDEF domain N175_16230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N175_16230 PF03466 LysR substrate binding domain N175_16235 PF00563 EAL domain N175_16235 PF00990 Diguanylate cyclase, GGDEF domain N175_16245 PF02678 Pirin N175_16245 PF05726 Pirin C-terminal cupin domain N175_16255 PF06865 Pyrimidine/purine nucleoside phosphorylase N175_16265 PF00793 DAHP synthetase I family N175_16270 PF00005 ABC transporter N175_16275 PF00528 Binding-protein-dependent transport system inner membrane component N175_16280 PF00497 Bacterial extracellular solute-binding proteins, family 3 N175_16285 PF00528 Binding-protein-dependent transport system inner membrane component N175_16290 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N175_16290 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N175_16290 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N175_16290 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N175_16310 PF01557 Fumarylacetoacetate (FAA) hydrolase family N175_16320 PF00892 EamA-like transporter family N175_16325 PF00462 Glutaredoxin N175_16340 PF07690 Major Facilitator Superfamily N175_16345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N175_16345 PF03466 LysR substrate binding domain N175_16350 PF00563 EAL domain N175_16350 PF00990 Diguanylate cyclase, GGDEF domain N175_16350 PF08447 PAS fold N175_16350 PF08448 PAS fold N175_16355 PF01551 Peptidase family M23 N175_16355 PF08525 Opacity-associated protein A N-terminal motif N175_16355 PF01476 LysM domain N175_16365 PF00916 Sulfate permease family N175_16365 PF01740 STAS domain N175_16380 PF00990 Diguanylate cyclase, GGDEF domain N175_16380 PF07694 5TMR of 5TMR-LYT N175_16385 PF00005 ABC transporter N175_16390 PF00528 Binding-protein-dependent transport system inner membrane component N175_16395 PF00528 Binding-protein-dependent transport system inner membrane component N175_16400 PF12849 PBP superfamily domain N175_16410 PF00155 Aminotransferase class I and II N175_16410 PF00392 Bacterial regulatory proteins, gntR family N175_16415 PF13302 Acetyltransferase (GNAT) domain N175_16430 PF03413 Peptidase propeptide and YPEB domain N175_16430 PF02868 Thermolysin metallopeptidase, alpha-helical domain N175_16430 PF04151 Bacterial pre-peptidase C-terminal domain N175_16430 PF01447 Thermolysin metallopeptidase, catalytic domain N175_16430 PF07504 Fungalysin/Thermolysin Propeptide Motif N175_16440 PF03922 OmpW family N175_16450 PF18416 N-acetylglucosamine binding protein domain 2 N175_16450 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading N175_16455 PF07690 Major Facilitator Superfamily N175_16460 PF03009 Glycerophosphoryl diester phosphodiesterase family N175_16465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N175_16465 PF03466 LysR substrate binding domain N175_16470 PF03306 Alpha-acetolactate decarboxylase N175_16475 PF00205 Thiamine pyrophosphate enzyme, central domain N175_16475 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N175_16475 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N175_16495 PF03466 LysR substrate binding domain N175_16495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N175_16500 PF02652 L-lactate permease N175_16505 PF01070 FMN-dependent dehydrogenase N175_16520 PF01161 Phosphatidylethanolamine-binding protein N175_16525 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) N175_16535 PF03372 Endonuclease/Exonuclease/phosphatase family N175_16550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N175_16550 PF08447 PAS fold N175_16560 PF02743 Cache domain N175_16560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N175_16560 PF00672 HAMP domain N175_16565 PF00356 Bacterial regulatory proteins, lacI family N175_16570 PF00933 Glycosyl hydrolase family 3 N terminal domain N175_16570 PF01915 Glycosyl hydrolase family 3 C-terminal domain N175_16570 PF14310 Fibronectin type III-like domain N175_16575 PF00005 ABC transporter N175_16575 PF17912 MalK OB fold domain N175_16580 PF00528 Binding-protein-dependent transport system inner membrane component N175_16585 PF00528 Binding-protein-dependent transport system inner membrane component N175_16595 PF00356 Bacterial regulatory proteins, lacI family N175_16600 PF02264 LamB porin N175_16605 PF01554 MatE N175_16620 PF07690 Major Facilitator Superfamily N175_16625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N175_16625 PF00672 HAMP domain N175_16630 PF13654 AAA domain N175_16630 PF05362 Lon protease (S16) C-terminal proteolytic domain N175_16640 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain N175_16640 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain N175_16645 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase N175_16650 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain N175_16650 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase N175_16660 PF03466 LysR substrate binding domain N175_16660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N175_16675 PF00356 Bacterial regulatory proteins, lacI family N175_16680 PF00294 pfkB family carbohydrate kinase N175_16685 PF13407 Periplasmic binding protein domain N175_16690 PF02653 Branched-chain amino acid transport system / permease component N175_16695 PF00005 ABC transporter N175_16700 PF05025 RbsD / FucU transport protein family N175_16720 PF16671 Actin cross-linking domain N175_16720 PF04717 Type VI secretion system, phage-baseplate injector N175_16725 PF05638 Type VI secretion system effector, Hcp N175_16735 PF02806 Alpha amylase, C-terminal all-beta domain N175_16735 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) N175_16735 PF00128 Alpha amylase, catalytic domain N175_16740 PF02446 4-alpha-glucanotransferase N175_16745 PF00343 Carbohydrate phosphorylase N175_16750 PF17874 MalT-like TPR region N175_16750 PF00196 Bacterial regulatory proteins, luxR family N175_16755 PF10928 Protein of unknown function (DUF2810) N175_16760 PF00672 HAMP domain N175_16760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N175_16760 PF17200 Single Cache domain 2 N175_16770 PF00672 HAMP domain N175_16770 PF02743 Cache domain N175_16770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N175_16775 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase N175_16795 PF00171 Aldehyde dehydrogenase family N175_16800 PF01037 Lrp/AsnC ligand binding domain N175_16805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N175_16805 PF00672 HAMP domain N175_16805 PF17200 Single Cache domain 2 N175_16815 PF00474 Sodium:solute symporter family N175_16825 PF00171 Aldehyde dehydrogenase family N175_16825 PF18327 Proline utilization A proline dehydrogenase N-terminal domain N175_16825 PF14850 DNA-binding domain of Proline dehydrogenase N175_16825 PF01619 Proline dehydrogenase N175_16830 PF12833 Helix-turn-helix domain N175_16840 PF03781 Sulfatase-modifying factor enzyme 1 N175_16850 PF01243 Pyridoxamine 5'-phosphate oxidase N175_16850 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region N175_16855 PF00529 HlyD membrane-fusion protein of T1SS N175_16870 PF03412 Peptidase C39 family N175_16870 PF00664 ABC transporter transmembrane region N175_16870 PF00005 ABC transporter N175_16880 PF00072 Response regulator receiver domain N175_16880 PF00990 Diguanylate cyclase, GGDEF domain N175_16890 PF02743 Cache domain N175_16890 PF00672 HAMP domain N175_16890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N175_16895 PF00072 Response regulator receiver domain N175_16895 PF01339 CheB methylesterase N175_16900 PF03975 CheD chemotactic sensory transduction N175_16905 PF03705 CheR methyltransferase, all-alpha domain N175_16905 PF01739 CheR methyltransferase, SAM binding domain N175_16910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N175_16910 PF00672 HAMP domain N175_16910 PF02203 Tar ligand binding domain homologue N175_16915 PF01584 CheW-like domain N175_16920 PF01584 CheW-like domain N175_16925 PF09078 CheY binding N175_16925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N175_16925 PF01584 CheW-like domain N175_16925 PF01627 Hpt domain N175_16925 PF02895 Signal transducing histidine kinase, homodimeric domain N175_16930 PF00072 Response regulator receiver domain N175_16930 PF00486 Transcriptional regulatory protein, C terminal N175_16940 PF13718 GNAT acetyltransferase 2 N175_16940 PF05127 Helicase N175_16945 PF13416 Bacterial extracellular solute-binding protein N175_16950 PF04986 Putative transposase N175_16950 PF14319 Transposase zinc-binding domain N175_16960 PF02195 ParB-like nuclease domain N175_16960 PF08775 ParB family N175_16965 PF18607 ParA helix turn helix domain N175_16965 PF13614 AAA domain N175_16975 PF14319 Transposase zinc-binding domain N175_16975 PF04986 Putative transposase N175_16995 PF01709 Transcriptional regulator N175_17000 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase N175_17000 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase N175_17005 PF03222 Tryptophan/tyrosine permease family N175_17035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N175_17035 PF03466 LysR substrate binding domain N175_17040 PF13460 NAD(P)H-binding N175_17050 PF03733 Inner membrane component domain N175_17065 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain N175_17065 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain N175_17070 PF00730 HhH-GPD superfamily base excision DNA repair protein N175_17070 PF06029 AlkA N-terminal domain N175_17075 PF04986 Putative transposase N175_17075 PF14319 Transposase zinc-binding domain N175_17085 PF03466 LysR substrate binding domain N175_17085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N175_17100 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase N175_17110 PF04225 Opacity-associated protein A LysM-like domain N175_17110 PF01551 Peptidase family M23 N175_17120 PF02378 Phosphotransferase system, EIIC N175_17120 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit N175_17120 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N175_17125 PF01232 Mannitol dehydrogenase Rossmann domain N175_17125 PF08125 Mannitol dehydrogenase C-terminal domain N175_17130 PF05068 Mannitol repressor N175_17135 PF01408 Oxidoreductase family, NAD-binding Rossmann fold N175_17140 PF03600 Citrate transporter N175_17145 PF00375 Sodium:dicarboxylate symporter family N175_17150 PF07681 DoxX N175_17175 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N175_17175 PF00529 HlyD membrane-fusion protein of T1SS N175_17180 PF01047 MarR family N175_17185 PF04393 Protein of unknown function (DUF535) N175_17190 PF00563 EAL domain N175_17190 PF12792 CSS motif domain associated with EAL N175_17195 PF04244 Deoxyribodipyrimidine photo-lyase-related protein N175_17200 PF00581 Rhodanese-like domain N175_17210 PF00005 ABC transporter N175_17225 PF08402 TOBE domain N175_17225 PF00005 ABC transporter N175_17235 PF00528 Binding-protein-dependent transport system inner membrane component N175_17250 PF07702 UTRA domain N175_17250 PF00392 Bacterial regulatory proteins, gntR family N175_17255 PF00270 DEAD/DEAH box helicase N175_17255 PF00271 Helicase conserved C-terminal domain N175_17260 PF01042 Endoribonuclease L-PSP N175_17265 PF13419 Haloacid dehalogenase-like hydrolase N175_17275 PF04055 Radical SAM superfamily N175_17280 PF11230 Protein of unknown function (DUF3029) N175_17290 PF16884 N-terminal domain of oxidoreductase N175_17290 PF00107 Zinc-binding dehydrogenase N175_17295 PF00440 Bacterial regulatory proteins, tetR family N175_17295 PF16925 Tetracyclin repressor-like, C-terminal domain N175_17310 PF00072 Response regulator receiver domain N175_17310 PF00486 Transcriptional regulatory protein, C terminal N175_17320 PF00849 RNA pseudouridylate synthase N175_17335 PF13737 Transposase DDE domain N175_17385 PF00004 ATPase family associated with various cellular activities (AAA) N175_17385 PF10431 C-terminal, D2-small domain, of ClpB protein N175_17385 PF17871 AAA lid domain N175_17385 PF07724 AAA domain (Cdc48 subfamily) N175_17415 PF16671 Actin cross-linking domain N175_17415 PF04717 Type VI secretion system, phage-baseplate injector N175_17475 PF00939 Sodium:sulfate symporter transmembrane region N175_17480 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) N175_17485 PF00704 Glycosyl hydrolases family 18 N175_17485 PF08329 Chitinase A, N-terminal domain N175_17490 PF00392 Bacterial regulatory proteins, gntR family N175_17490 PF07702 UTRA domain N175_17495 PF00005 ABC transporter N175_17505 PF00672 HAMP domain N175_17505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N175_17520 PF00672 HAMP domain N175_17520 PF02743 Cache domain N175_17520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N175_17535 PF01569 PAP2 superfamily N175_17540 PF04286 Protein of unknown function (DUF445) N175_17545 PF00005 ABC transporter N175_17545 PF00664 ABC transporter transmembrane region N175_17565 PF01261 Xylose isomerase-like TIM barrel N175_17570 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family N175_17580 PF00596 Class II Aldolase and Adducin N-terminal domain N175_17585 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N175_17590 PF03611 PTS system sugar-specific permease component N175_17595 PF08220 DeoR-like helix-turn-helix domain N175_17595 PF00455 DeoR C terminal sensor domain N175_17605 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) N175_17605 PF00128 Alpha amylase, catalytic domain N175_17610 PF02264 LamB porin N175_17625 PF01547 Bacterial extracellular solute-binding protein N175_17630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N175_17630 PF03466 LysR substrate binding domain N175_17645 PF00375 Sodium:dicarboxylate symporter family N175_17655 PF02630 SCO1/SenC N175_17670 PF03616 Sodium/glutamate symporter N175_17675 PF12945 Flagellar protein YcgR N175_17675 PF07238 PilZ domain N175_17695 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N175_17695 PF00529 HlyD membrane-fusion protein of T1SS N175_17700 PF11742 Protein of unknown function (DUF3302) N175_17705 PF00990 Diguanylate cyclase, GGDEF domain N175_17720 PF01048 Phosphorylase superfamily N175_17725 PF08349 Protein of unknown function (DUF1722) N175_17730 PF13411 MerR HTH family regulatory protein N175_17735 PF00875 DNA photolyase N175_17735 PF03441 FAD binding domain of DNA photolyase N175_17740 PF03734 L,D-transpeptidase catalytic domain N175_17740 PF01476 LysM domain N175_17740 PF17969 L,D-transpeptidase C-terminal domain N175_17750 PF00271 Helicase conserved C-terminal domain N175_17750 PF00270 DEAD/DEAH box helicase N175_17755 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain N175_17755 PF00326 Prolyl oligopeptidase family N175_17760 PF07715 TonB-dependent Receptor Plug Domain N175_17760 PF00593 TonB dependent receptor N175_17800 PF10941 Protein of unknown function DUF2620 N175_17820 PF12262 Bacterial virulence factor lipase N-terminal N175_17825 PF12262 Bacterial virulence factor lipase N-terminal N175_17830 PF12262 Bacterial virulence factor lipase N-terminal N175_17835 PF12262 Bacterial virulence factor lipase N-terminal N175_17850 PF00128 Alpha amylase, catalytic domain N175_17855 PF00248 Aldo/keto reductase family N175_17865 PF12704 MacB-like periplasmic core domain N175_17865 PF02687 FtsX-like permease family N175_17865 PF00005 ABC transporter N175_17870 PF02687 FtsX-like permease family N175_17870 PF12704 MacB-like periplasmic core domain N175_17885 PF06580 Histidine kinase N175_17885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N175_17890 PF00072 Response regulator receiver domain N175_17890 PF04397 LytTr DNA-binding domain N175_17895 PF00360 Phytochrome region N175_17895 PF00990 Diguanylate cyclase, GGDEF domain N175_17895 PF01590 GAF domain N175_17895 PF00563 EAL domain N175_17905 PF03605 Anaerobic c4-dicarboxylate membrane transporter N175_17915 PF00072 Response regulator receiver domain N175_17920 PF00672 HAMP domain N175_17920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N175_17920 PF00512 His Kinase A (phospho-acceptor) domain N175_17920 PF01627 Hpt domain N175_17920 PF00072 Response regulator receiver domain N175_17920 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) N175_17925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N175_17925 PF00672 HAMP domain N175_17930 PF13520 Amino acid permease N175_17950 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain N175_17950 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain N175_17955 PF00072 Response regulator receiver domain N175_17955 PF00512 His Kinase A (phospho-acceptor) domain N175_17955 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) N175_17955 PF01627 Hpt domain N175_17955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N175_17955 PF00672 HAMP domain N175_17970 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N175_17975 PF00873 AcrB/AcrD/AcrF family N175_17985 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region N175_17995 PF01408 Oxidoreductase family, NAD-binding Rossmann fold N175_18005 PF12464 Maltose acetyltransferase N175_18005 PF14602 Hexapeptide repeat of succinyl-transferase N175_18010 PF00892 EamA-like transporter family N175_18020 PF03466 LysR substrate binding domain N175_18020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N175_18030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N175_18030 PF03466 LysR substrate binding domain N175_18035 PF00501 AMP-binding enzyme N175_18035 PF13193 AMP-binding enzyme C-terminal domain N175_18040 PF00351 Biopterin-dependent aromatic amino acid hydroxylase N175_18045 PF01329 Pterin 4 alpha carbinolamine dehydratase N175_18055 PF02743 Cache domain N175_18055 PF00672 HAMP domain N175_18055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N175_18060 PF01554 MatE N175_18065 PF02311 AraC-like ligand binding domain N175_18065 PF12833 Helix-turn-helix domain N175_18070 PF11849 Domain of unknown function (DUF3369) N175_18075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N175_18075 PF00512 His Kinase A (phospho-acceptor) domain N175_18075 PF00497 Bacterial extracellular solute-binding proteins, family 3 N175_18085 PF07690 Major Facilitator Superfamily N175_18095 PF00012 Hsp70 protein N175_18105 PF01037 Lrp/AsnC ligand binding domain N175_18110 PF00657 GDSL-like Lipase/Acylhydrolase N175_18115 PF07968 Leukocidin/Hemolysin toxin family N175_18115 PF12563 Hemolytic toxin N terminal N175_18115 PF16458 Beta-prism lectin N175_18120 PF00561 alpha/beta hydrolase fold N175_18125 PF03280 Proteobacterial lipase chaperone protein N175_18130 PF05547 Immune inhibitor A peptidase M6 N175_18130 PF00801 PKD domain N175_18145 PF08453 Peptidase family M9 N-terminal N175_18145 PF04151 Bacterial pre-peptidase C-terminal domain N175_18145 PF01752 Collagenase N175_18155 PF01497 Periplasmic binding protein N175_18160 PF01032 FecCD transport family N175_18165 PF01032 FecCD transport family N175_18170 PF00005 ABC transporter N175_18175 PF00871 Acetokinase family N175_18180 PF00579 tRNA synthetases class I (W and Y) N175_18185 PF00196 Bacterial regulatory proteins, luxR family N175_18215 PF13005 zinc-finger binding domain of transposase IS66 N175_18215 PF13817 IS66 C-terminal element N175_18215 PF03050 Transposase IS66 family N175_18215 PF13007 Transposase C of IS166 homeodomain N175_18220 PF03193 RsgA GTPase N175_18230 PF08241 Methyltransferase domain N175_18235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N175_18235 PF12729 Four helix bundle sensory module for signal transduction N175_18235 PF00672 HAMP domain N175_18240 PF03741 Integral membrane protein TerC family N175_18250 PF02525 Flavodoxin-like fold N175_18255 PF00248 Aldo/keto reductase family N175_18260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N175_18260 PF03466 LysR substrate binding domain N175_18285 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N175_18285 PF00529 HlyD membrane-fusion protein of T1SS N175_18300 PF02347 Glycine cleavage system P-protein N175_18310 PF00464 Serine hydroxymethyltransferase N175_18320 PF01571 Aminomethyltransferase folate-binding domain N175_18320 PF08669 Glycine cleavage T-protein C-terminal barrel domain N175_18335 PF05193 Peptidase M16 inactive domain N175_18335 PF00675 Insulinase (Peptidase family M16) N175_18345 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit N175_18345 PF02378 Phosphotransferase system, EIIC N175_18350 PF00294 pfkB family carbohydrate kinase N175_18355 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N175_18355 PF00381 PTS HPr component phosphorylation site N175_18360 PF00356 Bacterial regulatory proteins, lacI family N175_18360 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family N175_18365 PF12320 Type 5 capsule protein repressor C-terminal domain N175_18365 PF00149 Calcineurin-like phosphoesterase N175_18370 PF13476 AAA domain N175_18375 PF00072 Response regulator receiver domain N175_18375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N175_18380 PF00155 Aminotransferase class I and II N175_18390 PF00654 Voltage gated chloride channel N175_18395 PF02492 CobW/HypB/UreG, nucleotide-binding domain N175_18395 PF07683 Cobalamin synthesis protein cobW C-terminal domain N175_18400 PF00005 ABC transporter N175_18405 PF02687 FtsX-like permease family N175_18405 PF12704 MacB-like periplasmic core domain N175_18405 PF00005 ABC transporter N175_18410 PF02687 FtsX-like permease family N175_18410 PF12704 MacB-like periplasmic core domain N175_18410 PF00005 ABC transporter N175_18425 PF01926 50S ribosome-binding GTPase N175_18460 PF03608 PTS system enzyme II sorbitol-specific factor N175_18465 PF03612 Sorbitol phosphotransferase enzyme II N-terminus N175_18465 PF07663 Sorbitol phosphotransferase enzyme II C-terminus N175_18470 PF03829 PTS system glucitol/sorbitol-specific IIA component N175_18475 PF00106 short chain dehydrogenase N175_18480 PF06923 Glucitol operon activator protein (GutM) N175_18485 PF08220 DeoR-like helix-turn-helix domain N175_18485 PF00455 DeoR C terminal sensor domain N175_18490 PF03608 PTS system enzyme II sorbitol-specific factor N175_18495 PF07663 Sorbitol phosphotransferase enzyme II C-terminus N175_18495 PF03612 Sorbitol phosphotransferase enzyme II N-terminus N175_18500 PF03829 PTS system glucitol/sorbitol-specific IIA component N175_18505 PF03459 TOBE domain N175_18505 PF17912 MalK OB fold domain N175_18505 PF00005 ABC transporter N175_18515 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD N175_18515 PF00132 Bacterial transferase hexapeptide (six repeats) N175_18525 PF13416 Bacterial extracellular solute-binding protein N175_18530 PF00528 Binding-protein-dependent transport system inner membrane component N175_18535 PF00528 Binding-protein-dependent transport system inner membrane component N175_18540 PF02903 Alpha amylase, N-terminal ig-like domain N175_18540 PF00128 Alpha amylase, catalytic domain N175_18560 PF07549 SecD/SecF GG Motif N175_18560 PF02355 Protein export membrane protein N175_18560 PF13721 SecD export protein N-terminal TM region N175_18565 PF02355 Protein export membrane protein N175_18565 PF07549 SecD/SecF GG Motif N175_18575 PF03264 NapC/NirT cytochrome c family, N-terminal region N175_18580 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) N175_18585 PF01568 Molydopterin dinucleotide binding domain N175_18585 PF00384 Molybdopterin oxidoreductase N175_18585 PF04879 Molybdopterin oxidoreductase Fe4S4 domain N175_18595 PF13187 4Fe-4S dicluster domain N175_18595 PF12838 4Fe-4S dicluster domain N175_18600 PF07730 Histidine kinase N175_18600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N175_18600 PF00672 HAMP domain N175_18600 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term N175_18605 PF00072 Response regulator receiver domain N175_18605 PF00196 Bacterial regulatory proteins, luxR family N175_18610 PF03606 C4-dicarboxylate anaerobic carrier N175_18635 PF12849 PBP superfamily domain N175_18645 PF00773 RNB domain N175_18645 PF08206 Ribonuclease B OB domain N175_18645 PF00575 S1 RNA binding domain N175_18650 PF03880 DbpA RNA binding domain N175_18650 PF00271 Helicase conserved C-terminal domain N175_18650 PF00270 DEAD/DEAH box helicase N175_18655 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) N175_18655 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain N175_18655 PF02824 TGS domain N175_18655 PF03129 Anticodon binding domain N175_18660 PF00707 Translation initiation factor IF-3, C-terminal domain N175_18660 PF05198 Translation initiation factor IF-3, N-terminal domain N175_18665 PF01632 Ribosomal protein L35 N175_18670 PF00453 Ribosomal protein L20 N175_18675 PF00589 Phage integrase family N175_18675 PF13495 Phage integrase, N-terminal SAM-like domain N175_18680 PF13005 zinc-finger binding domain of transposase IS66 N175_18680 PF13007 Transposase C of IS166 homeodomain N175_18680 PF13817 IS66 C-terminal element N175_18680 PF03050 Transposase IS66 family N175_18695 PF01479 S4 domain N175_18695 PF00849 RNA pseudouridylate synthase N175_18700 PF08242 Methyltransferase domain N175_18745 PF05016 ParE toxin of type II toxin-antitoxin system, parDE N175_18835 PF02631 RecX family N175_18940 PF08212 Lipocalin-like domain N175_19235 PF13737 Transposase DDE domain N175_19245 PF00005 ABC transporter N175_19250 PF00550 Phosphopantetheine attachment site N175_19250 PF00857 Isochorismatase family N175_19255 PF00501 AMP-binding enzyme N175_19255 PF13193 AMP-binding enzyme C-terminal domain N175_19260 PF00425 chorismate binding enzyme N175_19265 PF13737 Transposase DDE domain N175_19270 PF00793 DAHP synthetase I family N175_19275 PF13007 Transposase C of IS166 homeodomain N175_19275 PF13005 zinc-finger binding domain of transposase IS66 N175_19275 PF13817 IS66 C-terminal element N175_19275 PF03050 Transposase IS66 family N175_19295 PF02371 Transposase IS116/IS110/IS902 family N175_19295 PF01548 Transposase N175_19315 PF13700 Domain of unknown function (DUF4158) N175_19315 PF01526 Tn3 transposase DDE domain N175_19320 PF02796 Helix-turn-helix domain of resolvase N175_19320 PF00239 Resolvase, N terminal domain N175_19330 PF02631 RecX family N175_19335 PF13737 Transposase DDE domain N175_19345 PF00501 AMP-binding enzyme N175_19345 PF13193 AMP-binding enzyme C-terminal domain N175_19345 PF00668 Condensation domain N175_19345 PF00550 Phosphopantetheine attachment site N175_19350 PF13737 Transposase DDE domain N175_19355 PF01032 FecCD transport family N175_19360 PF01032 FecCD transport family N175_19365 PF01497 Periplasmic binding protein N175_19370 PF00593 TonB dependent receptor N175_19370 PF07715 TonB-dependent Receptor Plug Domain N175_19375 PF13193 AMP-binding enzyme C-terminal domain N175_19375 PF00501 AMP-binding enzyme N175_19375 PF00668 Condensation domain N175_19380 PF00975 Thioesterase domain N175_19385 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) N175_19395 PF00975 Thioesterase domain N175_19395 PF00501 AMP-binding enzyme N175_19395 PF13193 AMP-binding enzyme C-terminal domain N175_19395 PF00668 Condensation domain N175_19395 PF00550 Phosphopantetheine attachment site N175_19400 PF13737 Transposase DDE domain N175_19410 PF00282 Pyridoxal-dependent decarboxylase conserved domain N175_19415 PF00005 ABC transporter N175_19420 PF00664 ABC transporter transmembrane region N175_19420 PF00005 ABC transporter N175_19435 PF13005 zinc-finger binding domain of transposase IS66 N175_19435 PF03050 Transposase IS66 family N175_19435 PF13007 Transposase C of IS166 homeodomain N175_19435 PF13817 IS66 C-terminal element N175_19450 PF14319 Transposase zinc-binding domain N175_19450 PF04986 Putative transposase N175_19460 PF05973 Phage derived protein Gp49-like (DUF891) N175_19480 PF08535 KorB domain N175_19480 PF06613 KorB C-terminal beta-barrel domain N175_19480 PF02195 ParB-like nuclease domain N175_19485 PF13614 AAA domain N175_19505 PF14319 Transposase zinc-binding domain N175_19505 PF04986 Putative transposase