N175_00030 SM00357 Cold shock protein domain N175_00030 SM00382 ATPases associated with a variety of cellular activities N175_00030 SM00959 Rho termination factor, N-terminal domain N175_00040 SM00487 DEAD-like helicases superfamily N175_00040 SM00490 helicase superfamily c-terminal domain N175_00060 SM00072 Guanylate kinase homologues. N175_00065 SM01409 N175_00065 N175_00070 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. N175_00070 SM00954 Region found in RelA / SpoT proteins N175_00075 SM00487 DEAD-like helicases superfamily N175_00075 SM00490 helicase superfamily c-terminal domain N175_00085 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N175_00085 SM00387 Histidine kinase-like ATPases N175_00085 SM00388 His Kinase A (phosphoacceptor) domain N175_00090 SM00448 cheY-homologous receiver domain N175_00090 SM00862 Transcriptional regulatory protein, C terminal N175_00095 SM00495 Chitin-binding domain type 3 N175_00145 SM00316 Ribosomal protein S1-like RNA-binding domain N175_00145 SM00732 Likely ribonuclease with RNase H fold. N175_00230 SM00382 ATPases associated with a variety of cellular activities N175_00245 SM00363 S4 RNA-binding domain N175_00290 SM01230 N175_00290 N175_00300 SM00091 PAS domain N175_00300 SM00387 Histidine kinase-like ATPases N175_00300 SM00388 His Kinase A (phosphoacceptor) domain N175_00305 SM00382 ATPases associated with a variety of cellular activities N175_00305 SM00448 cheY-homologous receiver domain N175_00310 SM00052 Putative diguanylate phosphodiesterase N175_00310 SM00267 diguanylate cyclase N175_00310 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N175_00350 SM00360 RNA recognition motif N175_00390 SM00530 Helix-turn-helix XRE-family like proteins N175_00440 SM00857 Resolvase, N terminal domain N175_00475 SM01038 Beta galactosidase small chain N175_00510 SM00563 Phosphate acyltransferases N175_00535 SM00450 Rhodanese Homology Domain N175_00555 SM00382 ATPases associated with a variety of cellular activities N175_00560 SM00382 ATPases associated with a variety of cellular activities N175_00560 SM00962 SRP54-type protein, GTPase domain N175_00560 SM00963 SRP54-type protein, helical bundle domain N175_00650 SM00052 Putative diguanylate phosphodiesterase N175_00680 SM01144 N175_00680 N175_00715 SM01219 N175_00715 N175_00795 SM01001 AIR carboxylase N175_00820 SM00257 Lysin motif N175_00885 SM00491 N175_00885 N175_00995 SM00829 Enoylreductase N175_01055 SM00387 Histidine kinase-like ATPases N175_01055 SM00433 TopoisomeraseII N175_01065 SM00480 DNA polymerase III beta subunit N175_01070 SM00382 ATPases associated with a variety of cellular activities N175_01070 SM00760 Bacterial dnaA protein helix-turn-helix domain N175_01075 SM00062 Bacterial periplasmic substrate-binding proteins N175_01085 SM00382 ATPases associated with a variety of cellular activities N175_01100 SM01234 N175_01100 N175_01120 SM01228 N175_01120 N175_01135 SM00470 ParB-like nuclease domain N175_01175 SM00382 ATPases associated with a variety of cellular activities N175_01290 SM00876 Biotin and Thiamin Synthesis associated domain N175_01320 SM00344 helix_turn_helix ASNC type N175_01375 SM00382 ATPases associated with a variety of cellular activities N175_01390 SM01007 Class II Aldolase and Adducin N-terminal domain N175_01405 SM00342 helix_turn_helix, arabinose operon control protein N175_01455 SM01004 Delta-aminolevulinic acid dehydratase N175_01460 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs N175_01460 SM00474 3'-5' exonuclease N175_01460 SM00475 5'-3' exonuclease N175_01460 SM00482 DNA polymerase A domain N175_01490 SM00729 Elongator protein 3, MiaB family, Radical SAM N175_01565 SM00382 ATPases associated with a variety of cellular activities N175_01595 SM00448 cheY-homologous receiver domain N175_01610 SM00530 Helix-turn-helix XRE-family like proteins N175_01620 SM00487 DEAD-like helicases superfamily N175_01760 SM00342 helix_turn_helix, arabinose operon control protein N175_01770 SM00341 Helicase and RNase D C-terminal N175_01770 SM00487 DEAD-like helicases superfamily N175_01770 SM00490 helicase superfamily c-terminal domain N175_01770 SM00956 N175_01770 N175_01800 SM00382 ATPases associated with a variety of cellular activities N175_01810 SM00382 ATPases associated with a variety of cellular activities N175_01845 SM00636 N175_01845 N175_01920 SM00530 Helix-turn-helix XRE-family like proteins N175_01990 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain N175_01990 SM01232 N175_01990 N175_02100 SM00382 ATPases associated with a variety of cellular activities N175_02255 SM00226 Low molecular weight phosphatase family N175_02305 SM00984 UDP binding domain N175_02315 SM00849 Metallo-beta-lactamase superfamily N175_02315 SM01027 Beta-Casp domain N175_02320 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N175_02320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N175_02355 SM00411 bacterial (prokaryotic) histone like domain N175_02365 SM01209 N175_02365 N175_02365 SM01210 N175_02365 N175_02370 SM00798 AICARFT/IMPCHase bienzyme N175_02370 SM00851 MGS-like domain N175_02380 SM00422 helix_turn_helix, mercury resistance N175_02385 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N175_02390 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N175_02390 SM01049 N175_02390 N175_02420 SM00878 Biotin carboxylase C-terminal domain N175_02440 SM00479 N175_02440 N175_02455 SM00387 Histidine kinase-like ATPases N175_02455 SM00388 His Kinase A (phosphoacceptor) domain N175_02455 SM00448 cheY-homologous receiver domain N175_02470 SM01091 Transporter associated domain N175_02475 SM00421 helix_turn_helix, Lux Regulon N175_02475 SM00448 cheY-homologous receiver domain N175_02540 SM00357 Cold shock protein domain N175_02550 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N175_02550 SM00387 Histidine kinase-like ATPases N175_02550 SM00388 His Kinase A (phosphoacceptor) domain N175_02555 SM00448 cheY-homologous receiver domain N175_02555 SM00862 Transcriptional regulatory protein, C terminal N175_02605 SM00919 Malic enzyme, NAD binding domain N175_02605 SM01274 N175_02605 N175_02615 SM00487 DEAD-like helicases superfamily N175_02615 SM00490 helicase superfamily c-terminal domain N175_02620 SM00354 helix_turn _helix lactose operon repressor N175_02635 SM00382 ATPases associated with a variety of cellular activities N175_02635 SM01086 C-terminal, D2-small domain, of ClpB protein N175_02680 SM00883 Chaperonin 10 Kd subunit N175_02705 SM00841 Elongation factor P, C-terminal N175_02705 SM01185 N175_02705 N175_02735 SM00450 Rhodanese Homology Domain N175_02750 SM00971 Serine acetyltransferase, N-terminal N175_02770 SM00859 Semialdehyde dehydrogenase, NAD binding domain N175_02830 SM00965 Secretin and TonB N terminus short domain N175_02920 SM01150 N175_02920 N175_02925 SM00100 Cyclic nucleotide-monophosphate binding domain N175_02925 SM00419 helix_turn_helix, cAMP Regulatory protein N175_02950 SM00382 ATPases associated with a variety of cellular activities N175_02980 SM00788 Adenylosuccinate synthetase N175_02985 SM00671 Sel1-like repeats. N175_02990 SM00316 Ribosomal protein S1-like RNA-binding domain N175_02990 SM00357 Cold shock protein domain N175_02990 SM00955 N175_02990 N175_02995 SM00967 RNA 2'-O ribose methyltransferase substrate binding N175_03000 SM01403 N175_03000 N175_03020 SM01382 N175_03020 N175_03020 SM01383 N175_03020 N175_03035 SM00322 K homology RNA-binding domain N175_03055 SM01374 N175_03055 N175_03060 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. N175_03125 SM00363 S4 RNA-binding domain N175_03125 SM01390 N175_03125 N175_03130 SM00662 RNA polymerases D N175_03155 SM00487 DEAD-like helicases superfamily N175_03155 SM00490 helicase superfamily c-terminal domain N175_03160 SM00563 Phosphate acyltransferases N175_03235 SM00382 ATPases associated with a variety of cellular activities N175_03315 SM00382 ATPases associated with a variety of cellular activities N175_03330 SM00116 Domain in cystathionine beta-synthase and other proteins. N175_03330 SM00924 MgtE intracellular N domain N175_03360 SM00382 ATPases associated with a variety of cellular activities N175_03380 SM00116 Domain in cystathionine beta-synthase and other proteins. N175_03395 SM00382 ATPases associated with a variety of cellular activities N175_03430 SM00563 Phosphate acyltransferases N175_03435 SM00387 Histidine kinase-like ATPases N175_03440 SM00989 N175_03440 N175_03465 SM00670 Large family of predicted nucleotide-binding domains N175_03475 SM00487 DEAD-like helicases superfamily N175_03475 SM00490 helicase superfamily c-terminal domain N175_03560 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. N175_03625 SM01329 N175_03625 N175_03630 SM00917 LeuA allosteric (dimerisation) domain N175_03635 SM00014 Acid phosphatase homologues N175_03760 SM00358 Double-stranded RNA binding motif N175_03760 SM00535 Ribonuclease III family N175_03785 SM00073 Histidine Phosphotransfer domain N175_03785 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N175_03785 SM00387 Histidine kinase-like ATPases N175_03785 SM00388 His Kinase A (phosphoacceptor) domain N175_03785 SM00448 cheY-homologous receiver domain N175_03795 SM00954 Region found in RelA / SpoT proteins N175_03810 SM01192 N175_03810 N175_03810 SM01193 N175_03810 N175_03820 SM00382 ATPases associated with a variety of cellular activities N175_03830 SM00287 Bacterial SH3 domain homologues N175_03850 SM00880 N175_03850 N175_03850 SM01118 N175_03850 N175_03860 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N175_03905 SM00387 Histidine kinase-like ATPases N175_03905 SM00433 TopoisomeraseII N175_03910 SM00434 DNA Topoisomerase IV N175_03915 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. N175_03920 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. N175_03975 SM00749 bacterial OsmY and nodulation domain N175_04060 SM00842 Cell division protein FtsA N175_04065 SM00864 Tubulin/FtsZ family, GTPase domain N175_04065 SM00865 Tubulin/FtsZ family, C-terminal domain N175_04080 SM00957 SecA DEAD-like domain N175_04080 SM00958 SecA preprotein cross-linking domain N175_04100 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain N175_04105 SM00851 MGS-like domain N175_04105 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain N175_04170 SM00729 Elongator protein 3, MiaB family, Radical SAM N175_04175 SM00073 Histidine Phosphotransfer domain N175_04175 SM00091 PAS domain N175_04175 SM00387 Histidine kinase-like ATPases N175_04175 SM00388 His Kinase A (phosphoacceptor) domain N175_04175 SM00448 cheY-homologous receiver domain N175_04185 SM00448 cheY-homologous receiver domain N175_04185 SM00862 Transcriptional regulatory protein, C terminal N175_04220 SM00518 AP endonuclease family 2 N175_04225 SM00986 Uracil DNA glycosylase superfamily N175_04225 SM00987 UreE urease accessory protein, C-terminal domain N175_04270 SM01133 N175_04270 N175_04275 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain N175_04305 SM00382 ATPases associated with a variety of cellular activities N175_04310 SM00838 Elongation factor G C-terminus N175_04310 SM00889 Elongation factor G, domain IV N175_04365 SM00354 helix_turn _helix lactose operon repressor N175_04445 SM00925 MltA specific insert domain N175_04480 SM00464 Found in ATP-dependent protease La (LON) N175_04530 SM00900 N175_04530 N175_04575 SM00267 diguanylate cyclase N175_04630 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase N175_04685 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. N175_04730 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. N175_04740 SM00935 Outer membrane protein (OmpH-like) N175_04770 SM00481 DNA polymerase alpha chain like domain N175_04780 SM00977 TilS substrate C-terminal domain N175_04795 SM00938 Nitrogen regulatory protein P-II N175_04810 SM00257 Lysin motif N175_04815 SM00849 Metallo-beta-lactamase superfamily N175_04830 SM00479 N175_04830 N175_04870 SM00363 S4 RNA-binding domain N175_04890 SM01081 Putative carbohydrate binding domain N175_04950 SM00858 N175_04950 N175_04955 SM00260 Two component signalling adaptor domain N175_04955 SM00448 cheY-homologous receiver domain N175_04960 SM00138 Methyltransferase, chemotaxis proteins N175_05010 SM00047 Lysozyme subfamily 2 N175_05115 SM01400 N175_05115 N175_05135 SM00937 N175_05135 N175_05210 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N175_05210 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N175_05225 SM01130 N175_05225 N175_05315 SM00382 ATPases associated with a variety of cellular activities N175_05320 SM00091 PAS domain N175_05320 SM00387 Histidine kinase-like ATPases N175_05320 SM00388 His Kinase A (phosphoacceptor) domain N175_05325 SM00382 ATPases associated with a variety of cellular activities N175_05325 SM00448 cheY-homologous receiver domain N175_05350 SM00382 ATPases associated with a variety of cellular activities N175_05405 SM00463 Small MutS-related domain N175_05445 SM00825 Beta-ketoacyl synthase N175_05455 SM00859 Semialdehyde dehydrogenase, NAD binding domain N175_05545 SM00861 Transketolase, pyrimidine binding domain N175_05560 SM00881 CoA binding domain N175_05570 SM00382 ATPases associated with a variety of cellular activities N175_05580 SM00342 helix_turn_helix, arabinose operon control protein N175_05585 SM00899 N175_05585 N175_05605 SM00836 DALR anticodon binding domain N175_05605 SM01016 Arginyl tRNA synthetase N terminal dom N175_05620 SM00855 Phosphoglycerate mutase family N175_05630 SM00382 ATPases associated with a variety of cellular activities N175_05630 SM00962 SRP54-type protein, GTPase domain N175_05645 SM00448 cheY-homologous receiver domain N175_05655 SM00073 Histidine Phosphotransfer domain N175_05655 SM00260 Two component signalling adaptor domain N175_05655 SM00387 Histidine kinase-like ATPases N175_05655 SM01231 N175_05655 N175_05660 SM00448 cheY-homologous receiver domain N175_05670 SM00260 Two component signalling adaptor domain N175_05675 SM00260 Two component signalling adaptor domain N175_05685 SM00382 ATPases associated with a variety of cellular activities N175_05755 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain N175_05755 SM00437 Bacterial DNA topoisomerase I DNA-binding domain N175_05755 SM00493 N175_05755 N175_05820 SM00859 Semialdehyde dehydrogenase, NAD binding domain N175_05840 SM00316 Ribosomal protein S1-like RNA-binding domain N175_05845 SM00363 S4 RNA-binding domain N175_05875 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. N175_05880 SM00822 N175_05880 N175_05890 SM00825 Beta-ketoacyl synthase N175_05960 SM00260 Two component signalling adaptor domain N175_05960 SM00448 cheY-homologous receiver domain N175_05980 SM01144 N175_05980 N175_05985 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. N175_05990 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. N175_06020 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain N175_06045 SM00563 Phosphate acyltransferases N175_06055 SM00978 N175_06055 N175_06065 SM00344 helix_turn_helix ASNC type N175_06090 SM00062 Bacterial periplasmic substrate-binding proteins N175_06090 SM00267 diguanylate cyclase N175_06115 SM01236 N175_06115 N175_06130 SM00448 cheY-homologous receiver domain N175_06130 SM00862 Transcriptional regulatory protein, C terminal N175_06135 SM00387 Histidine kinase-like ATPases N175_06135 SM00388 His Kinase A (phosphoacceptor) domain N175_06145 SM00344 helix_turn_helix ASNC type N175_06160 SM00448 cheY-homologous receiver domain N175_06160 SM00862 Transcriptional regulatory protein, C terminal N175_06165 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N175_06165 SM00387 Histidine kinase-like ATPases N175_06165 SM00388 His Kinase A (phosphoacceptor) domain N175_06180 SM00354 helix_turn _helix lactose operon repressor N175_06220 SM00825 Beta-ketoacyl synthase N175_06225 SM00822 N175_06225 N175_06235 SM00825 Beta-ketoacyl synthase N175_06295 SM00563 Phosphate acyltransferases N175_06315 SM00062 Bacterial periplasmic substrate-binding proteins N175_06315 SM00387 Histidine kinase-like ATPases N175_06315 SM00388 His Kinase A (phosphoacceptor) domain N175_06315 SM00448 cheY-homologous receiver domain N175_06320 SM00052 Putative diguanylate phosphodiesterase N175_06320 SM00421 helix_turn_helix, Lux Regulon N175_06320 SM00448 cheY-homologous receiver domain N175_06340 SM00382 ATPases associated with a variety of cellular activities N175_06345 SM00382 ATPases associated with a variety of cellular activities N175_06380 SM00382 ATPases associated with a variety of cellular activities N175_06400 SM00382 ATPases associated with a variety of cellular activities N175_06415 SM00729 Elongator protein 3, MiaB family, Radical SAM N175_06415 SM00876 Biotin and Thiamin Synthesis associated domain N175_06445 SM00345 helix_turn_helix gluconate operon transcriptional repressor N175_06455 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N175_06455 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N175_06505 SM00487 DEAD-like helicases superfamily N175_06505 SM00490 helicase superfamily c-terminal domain N175_06505 SM00982 N175_06505 N175_06505 SM01058 CarD-like/TRCF domain N175_06520 SM00382 ATPases associated with a variety of cellular activities N175_06535 SM00849 Metallo-beta-lactamase superfamily N175_06540 SM00382 ATPases associated with a variety of cellular activities N175_06575 SM00763 PrkA AAA domain N175_06595 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N175_06595 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N175_06620 SM00382 ATPases associated with a variety of cellular activities N175_06625 SM00062 Bacterial periplasmic substrate-binding proteins N175_06625 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. N175_06645 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N175_06645 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N175_06665 SM00491 N175_06665 N175_06680 SM00052 Putative diguanylate phosphodiesterase N175_06695 SM00840 N175_06695 N175_06705 SM00278 Helix-hairpin-helix DNA-binding motif class 1 N175_06710 SM00382 ATPases associated with a variety of cellular activities N175_06770 SM00028 Tetratricopeptide repeats N175_06800 SM00387 Histidine kinase-like ATPases N175_06800 SM00388 His Kinase A (phosphoacceptor) domain N175_06800 SM00448 cheY-homologous receiver domain N175_06855 SM00267 diguanylate cyclase N175_06900 SM00671 Sel1-like repeats. N175_06950 SM00345 helix_turn_helix gluconate operon transcriptional repressor N175_06950 SM00866 N175_06950 N175_06955 SM01022 N175_06955 N175_06965 SM00841 Elongation factor P, C-terminal N175_06965 SM01185 N175_06965 N175_06975 SM00486 DNA polymerase type-B family N175_06980 SM00421 helix_turn_helix, Lux Regulon N175_06980 SM00448 cheY-homologous receiver domain N175_06985 SM00278 Helix-hairpin-helix DNA-binding motif class 1 N175_06985 SM00465 GIY-YIG type nucleases (URI domain) N175_07030 SM00873 B3/4 domain N175_07030 SM00874 tRNA synthetase B5 domain N175_07030 SM00896 Ferredoxin-fold anticodon binding domain N175_07035 SM00411 bacterial (prokaryotic) histone like domain N175_07050 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) N175_07050 SM00091 PAS domain N175_07050 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N175_07060 SM00052 Putative diguanylate phosphodiesterase N175_07060 SM00267 diguanylate cyclase N175_07080 SM00479 N175_07080 N175_07095 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N175_07095 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N175_07100 SM00382 ATPases associated with a variety of cellular activities N175_07110 SM00382 ATPases associated with a variety of cellular activities N175_07145 SM00855 Phosphoglycerate mutase family N175_07160 SM00382 ATPases associated with a variety of cellular activities N175_07205 SM00028 Tetratricopeptide repeats N175_07245 SM00387 Histidine kinase-like ATPases N175_07250 SM00448 cheY-homologous receiver domain N175_07255 SM00062 Bacterial periplasmic substrate-binding proteins N175_07260 SM00260 Two component signalling adaptor domain N175_07260 SM00448 cheY-homologous receiver domain N175_07265 SM00642 Alpha-amylase domain N175_07275 SM00267 diguanylate cyclase N175_07290 SM00530 Helix-turn-helix XRE-family like proteins N175_07375 SM00382 ATPases associated with a variety of cellular activities N175_07375 SM01086 C-terminal, D2-small domain, of ClpB protein N175_07400 SM00240 Forkhead associated domain N175_07425 SM00220 Serine/Threonine protein kinases, catalytic domain N175_07445 SM00862 Transcriptional regulatory protein, C terminal N175_07455 SM00862 Transcriptional regulatory protein, C terminal N175_07465 SM00342 helix_turn_helix, arabinose operon control protein N175_07550 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N175_07550 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N175_07565 SM00052 Putative diguanylate phosphodiesterase N175_07580 SM00354 helix_turn _helix lactose operon repressor N175_07585 SM00640 Glycosyl hydrolases family 32 N175_07590 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N175_07590 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N175_07595 SM00062 Bacterial periplasmic substrate-binding proteins N175_07600 SM00450 Rhodanese Homology Domain N175_07605 SM00382 ATPases associated with a variety of cellular activities N175_07690 SM00849 Metallo-beta-lactamase superfamily N175_07705 SM00347 helix_turn_helix multiple antibiotic resistance protein N175_07715 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N175_07715 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N175_07720 SM00479 N175_07720 N175_07725 SM00100 Cyclic nucleotide-monophosphate binding domain N175_07725 SM00116 Domain in cystathionine beta-synthase and other proteins. N175_07735 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. N175_07740 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N175_07745 SM00448 cheY-homologous receiver domain N175_07755 SM00073 Histidine Phosphotransfer domain N175_07755 SM00260 Two component signalling adaptor domain N175_07755 SM00387 Histidine kinase-like ATPases N175_07755 SM01231 N175_07755 N175_07760 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N175_07760 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N175_07765 SM00260 Two component signalling adaptor domain N175_07770 SM00138 Methyltransferase, chemotaxis proteins N175_07780 SM00448 cheY-homologous receiver domain N175_07795 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N175_07795 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N175_07855 SM00091 PAS domain N175_07855 SM00382 ATPases associated with a variety of cellular activities N175_07870 SM00267 diguanylate cyclase N175_07880 SM01005 Alanine racemase, C-terminal domain N175_07885 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N175_07885 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N175_07895 SM00387 Histidine kinase-like ATPases N175_07900 SM00448 cheY-homologous receiver domain N175_07910 SM00357 Cold shock protein domain N175_07920 SM00487 DEAD-like helicases superfamily N175_07920 SM00490 helicase superfamily c-terminal domain N175_07930 SM00354 helix_turn _helix lactose operon repressor N175_07975 SM00267 diguanylate cyclase N175_07975 SM01079 N175_07975 N175_07980 SM00479 N175_07980 N175_07995 SM00382 ATPases associated with a variety of cellular activities N175_07995 SM00487 DEAD-like helicases superfamily N175_07995 SM00490 helicase superfamily c-terminal domain N175_07995 SM00847 Helicase associated domain (HA2) Add an annotation N175_08035 SM00116 Domain in cystathionine beta-synthase and other proteins. N175_08040 SM00479 N175_08040 N175_08095 SM00857 Resolvase, N terminal domain N175_08165 SM00487 DEAD-like helicases superfamily N175_08165 SM00490 helicase superfamily c-terminal domain N175_08260 SM00849 Metallo-beta-lactamase superfamily N175_08330 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N175_08340 SM01144 N175_08340 N175_08365 SM00382 ATPases associated with a variety of cellular activities N175_08385 SM00387 Histidine kinase-like ATPases N175_08390 SM00421 helix_turn_helix, Lux Regulon N175_08390 SM00448 cheY-homologous receiver domain N175_08395 SM00382 ATPases associated with a variety of cellular activities N175_08430 SM00382 ATPases associated with a variety of cellular activities N175_08460 SM00100 Cyclic nucleotide-monophosphate binding domain N175_08460 SM00419 helix_turn_helix, cAMP Regulatory protein N175_08550 SM00382 ATPases associated with a variety of cellular activities N175_08560 SM00981 N175_08560 N175_08595 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. N175_08595 SM00245 tail specific protease N175_08600 SM00945 ProQ/FINO family N175_08610 SM00382 ATPases associated with a variety of cellular activities N175_08630 SM00316 Ribosomal protein S1-like RNA-binding domain N175_08660 SM00267 diguanylate cyclase N175_08665 SM00028 Tetratricopeptide repeats N175_08675 SM00062 Bacterial periplasmic substrate-binding proteins N175_08690 SM00382 ATPases associated with a variety of cellular activities N175_08710 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase N175_08795 SM00345 helix_turn_helix gluconate operon transcriptional repressor N175_08795 SM00895 N175_08795 N175_08820 SM00448 cheY-homologous receiver domain N175_08820 SM00862 Transcriptional regulatory protein, C terminal N175_08825 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N175_08825 SM00387 Histidine kinase-like ATPases N175_08825 SM00388 His Kinase A (phosphoacceptor) domain N175_08850 SM00382 ATPases associated with a variety of cellular activities N175_08890 SM00342 helix_turn_helix, arabinose operon control protein N175_08950 SM00448 cheY-homologous receiver domain N175_08955 SM00387 Histidine kinase-like ATPases N175_08980 SM00764 Citrate lyase ligase C-terminal domain N175_09000 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N175_09015 SM00434 DNA Topoisomerase IV N175_09045 SM00852 Probable molybdopterin binding domain N175_09060 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N175_09060 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N175_09060 SM01049 N175_09060 N175_09100 SM00382 ATPases associated with a variety of cellular activities N175_09125 SM00363 S4 RNA-binding domain N175_09130 SM00487 DEAD-like helicases superfamily N175_09130 SM00490 helicase superfamily c-terminal domain N175_09140 SM00448 cheY-homologous receiver domain N175_09140 SM00862 Transcriptional regulatory protein, C terminal N175_09145 SM00387 Histidine kinase-like ATPases N175_09200 SM00155 Phospholipase D. Active site motifs. N175_09230 SM00382 ATPases associated with a variety of cellular activities N175_09250 SM00382 ATPases associated with a variety of cellular activities N175_09255 SM00382 ATPases associated with a variety of cellular activities N175_09270 SM01131 N175_09270 N175_09395 SM00448 cheY-homologous receiver domain N175_09395 SM00862 Transcriptional regulatory protein, C terminal N175_09410 SM00354 helix_turn _helix lactose operon repressor N175_09445 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain N175_09445 SM00437 Bacterial DNA topoisomerase I DNA-binding domain N175_09445 SM00493 N175_09445 N175_09470 SM00316 Ribosomal protein S1-like RNA-binding domain N175_09475 SM00382 ATPases associated with a variety of cellular activities N175_09475 SM01086 C-terminal, D2-small domain, of ClpB protein N175_09485 SM00357 Cold shock protein domain N175_09545 SM00528 Domain in histone-like proteins of HNS family N175_09585 SM00387 Histidine kinase-like ATPases N175_09590 SM00448 cheY-homologous receiver domain N175_09655 SM00919 Malic enzyme, NAD binding domain N175_09655 SM01274 N175_09655 N175_09680 SM00267 diguanylate cyclase N175_09690 SM00382 ATPases associated with a variety of cellular activities N175_09695 SM00382 ATPases associated with a variety of cellular activities N175_09720 SM00052 Putative diguanylate phosphodiesterase N175_09720 SM00267 diguanylate cyclase N175_09725 SM00363 S4 RNA-binding domain N175_09735 SM00481 DNA polymerase alpha chain like domain N175_09830 SM00052 Putative diguanylate phosphodiesterase N175_09830 SM00091 PAS domain N175_09835 SM00020 Trypsin-like serine protease N175_09840 SM00729 Elongator protein 3, MiaB family, Radical SAM N175_09895 SM00843 N175_09895 N175_09900 SM00344 helix_turn_helix ASNC type N175_09905 SM01002 Alanine dehydrogenase/PNT, C-terminal domain N175_09905 SM01003 Alanine dehydrogenase/PNT, N-terminal domain N175_09925 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family N175_09930 SM00028 Tetratricopeptide repeats N175_09940 SM00411 bacterial (prokaryotic) histone like domain N175_09945 SM00316 Ribosomal protein S1-like RNA-binding domain N175_09965 SM00411 bacterial (prokaryotic) histone like domain N175_09970 SM00382 ATPases associated with a variety of cellular activities N175_09970 SM00464 Found in ATP-dependent protease La (LON) N175_09975 SM00382 ATPases associated with a variety of cellular activities N175_09975 SM00994 ClpX C4-type zinc finger N175_09975 SM01086 C-terminal, D2-small domain, of ClpB protein N175_09995 SM00387 Histidine kinase-like ATPases N175_09995 SM00388 His Kinase A (phosphoacceptor) domain N175_10000 SM00382 ATPases associated with a variety of cellular activities N175_10000 SM00448 cheY-homologous receiver domain N175_10025 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N175_10025 SM00387 Histidine kinase-like ATPases N175_10030 SM00448 cheY-homologous receiver domain N175_10030 SM00862 Transcriptional regulatory protein, C terminal N175_10050 SM00487 DEAD-like helicases superfamily N175_10050 SM00490 helicase superfamily c-terminal domain N175_10055 SM00642 Alpha-amylase domain N175_10100 SM00495 Chitin-binding domain type 3 N175_10100 SM00636 N175_10100 N175_10140 SM00474 3'-5' exonuclease N175_10170 SM00487 DEAD-like helicases superfamily N175_10170 SM00491 N175_10170 N175_10195 SM00870 N175_10195 N175_10215 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain N175_10250 SM00493 N175_10250 N175_10260 SM00382 ATPases associated with a variety of cellular activities N175_10280 SM00448 cheY-homologous receiver domain N175_10375 SM00116 Domain in cystathionine beta-synthase and other proteins. N175_10380 SM00267 diguanylate cyclase N175_10400 SM00852 Probable molybdopterin binding domain N175_10405 SM00729 Elongator protein 3, MiaB family, Radical SAM N175_10425 SM00487 DEAD-like helicases superfamily N175_10425 SM00490 helicase superfamily c-terminal domain N175_10475 SM00823 Phosphopantetheine attachment site N175_10475 SM00824 Thioesterase N175_10490 SM00923 MbtH-like protein N175_10535 SM00900 N175_10535 N175_10545 SM00478 endonuclease III N175_10545 SM00525 N175_10545 N175_10560 SM00479 N175_10560 N175_10645 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. N175_10665 SM00387 Histidine kinase-like ATPases N175_10675 SM00862 Transcriptional regulatory protein, C terminal N175_10710 SM00244 prohibitin homologues N175_10720 SM00422 helix_turn_helix, mercury resistance N175_10740 SM00278 Helix-hairpin-helix DNA-binding motif class 1 N175_10740 SM00292 breast cancer carboxy-terminal domain N175_10740 SM00532 Ligase N family N175_10745 SM00771 ZipA, C-terminal domain (FtsZ-binding) N175_10780 SM00729 Elongator protein 3, MiaB family, Radical SAM N175_10795 SM00116 Domain in cystathionine beta-synthase and other proteins. N175_10795 SM01091 Transporter associated domain N175_10850 SM00936 Penicillin-binding protein 5, C-terminal domain N175_10865 SM00729 Elongator protein 3, MiaB family, Radical SAM N175_10970 SM00984 UDP binding domain N175_10975 SM00984 UDP binding domain N175_10990 SM00226 Low molecular weight phosphatase family N175_11040 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N175_11040 SM00387 Histidine kinase-like ATPases N175_11040 SM00388 His Kinase A (phosphoacceptor) domain N175_11045 SM00448 cheY-homologous receiver domain N175_11045 SM00862 Transcriptional regulatory protein, C terminal N175_11050 SM00642 Alpha-amylase domain N175_11060 SM00354 helix_turn _helix lactose operon repressor N175_11075 SM00382 ATPases associated with a variety of cellular activities N175_11075 SM00930 N175_11075 N175_11105 SM00028 Tetratricopeptide repeats N175_11110 SM00267 diguanylate cyclase N175_11125 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs N175_11125 SM00475 5'-3' exonuclease N175_11145 SM00981 N175_11145 N175_11175 SM00861 Transketolase, pyrimidine binding domain N175_11260 SM01211 N175_11260 N175_11265 SM00062 Bacterial periplasmic substrate-binding proteins N175_11285 SM00829 Enoylreductase N175_11325 SM00271 DnaJ molecular chaperone homology domain N175_11395 SM00382 ATPases associated with a variety of cellular activities N175_11405 SM00487 DEAD-like helicases superfamily N175_11470 SM00257 Lysin motif N175_11530 SM00487 DEAD-like helicases superfamily N175_11555 SM00382 ATPases associated with a variety of cellular activities N175_11620 SM00495 Chitin-binding domain type 3 N175_11635 SM00116 Domain in cystathionine beta-synthase and other proteins. N175_11635 SM01240 N175_11635 N175_11650 SM00382 ATPases associated with a variety of cellular activities N175_11655 SM00564 beta-propeller repeat N175_11685 SM00562 N175_11685 N175_11710 SM00271 DnaJ molecular chaperone homology domain N175_11755 SM01323 N175_11755 N175_11770 SM00116 Domain in cystathionine beta-synthase and other proteins. N175_11810 SM00382 ATPases associated with a variety of cellular activities N175_11840 SM00091 PAS domain N175_11840 SM00387 Histidine kinase-like ATPases N175_11840 SM00388 His Kinase A (phosphoacceptor) domain N175_11845 SM00448 cheY-homologous receiver domain N175_11845 SM00862 Transcriptional regulatory protein, C terminal N175_11910 SM00382 ATPases associated with a variety of cellular activities N175_11910 SM01086 C-terminal, D2-small domain, of ClpB protein N175_11920 SM00363 S4 RNA-binding domain N175_11940 SM00830 Chorismate mutase type II N175_11950 SM00052 Putative diguanylate phosphodiesterase N175_11950 SM00267 diguanylate cyclase N175_11970 SM00382 ATPases associated with a variety of cellular activities N175_11980 SM00830 Chorismate mutase type II N175_11995 SM00448 cheY-homologous receiver domain N175_12000 SM00850 LytTr DNA-binding domain N175_12055 SM00904 Riboflavin kinase N175_12070 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor N175_12160 SM00530 Helix-turn-helix XRE-family like proteins N175_12265 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. N175_12275 SM00927 DNA mismatch repair enzyme MutH N175_12290 SM00382 ATPases associated with a variety of cellular activities N175_12300 SM00937 N175_12300 N175_12315 SM00487 DEAD-like helicases superfamily N175_12315 SM00490 helicase superfamily c-terminal domain N175_12325 SM00052 Putative diguanylate phosphodiesterase N175_12325 SM00267 diguanylate cyclase N175_12355 SM00052 Putative diguanylate phosphodiesterase N175_12355 SM00091 PAS domain N175_12355 SM00267 diguanylate cyclase N175_12375 SM00347 helix_turn_helix multiple antibiotic resistance protein N175_12380 SM00028 Tetratricopeptide repeats N175_12385 SM00316 Ribosomal protein S1-like RNA-binding domain N175_12385 SM00322 K homology RNA-binding domain N175_12390 SM01387 N175_12390 N175_12410 SM00316 Ribosomal protein S1-like RNA-binding domain N175_12410 SM00322 K homology RNA-binding domain N175_12445 SM00382 ATPases associated with a variety of cellular activities N175_12455 SM01103 N175_12455 N175_12530 SM00091 PAS domain N175_12530 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N175_12530 SM00387 Histidine kinase-like ATPases N175_12530 SM00388 His Kinase A (phosphoacceptor) domain N175_12530 SM00448 cheY-homologous receiver domain N175_12550 SM00382 ATPases associated with a variety of cellular activities N175_12555 SM00382 ATPases associated with a variety of cellular activities N175_12575 SM01068 Putative carbohydrate binding domain N175_12585 SM00382 ATPases associated with a variety of cellular activities N175_12605 SM00938 Nitrogen regulatory protein P-II N175_12645 SM00487 DEAD-like helicases superfamily N175_12645 SM00490 helicase superfamily c-terminal domain N175_12645 SM00847 Helicase associated domain (HA2) Add an annotation N175_12695 SM00382 ATPases associated with a variety of cellular activities N175_12705 SM00947 Carbonic anhydrase N175_12735 SM00345 helix_turn_helix gluconate operon transcriptional repressor N175_12735 SM00895 N175_12735 N175_12760 SM00644 N175_12760 N175_12830 SM00382 ATPases associated with a variety of cellular activities N175_12830 SM00962 SRP54-type protein, GTPase domain N175_12830 SM00963 SRP54-type protein, helical bundle domain N175_12840 SM01091 Transporter associated domain N175_12865 SM00829 Enoylreductase N175_12935 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain N175_12945 SM00382 ATPases associated with a variety of cellular activities N175_12955 SM00382 ATPases associated with a variety of cellular activities N175_12980 SM00533 DNA-binding domain of DNA mismatch repair MUTS family N175_12980 SM00534 ATPase domain of DNA mismatch repair MUTS family N175_12990 SM00257 Lysin motif N175_13035 SM00905 Dihydroneopterin aldolase N175_13040 SM01207 N175_13040 N175_13065 SM00400 zinc finger N175_13065 SM00493 N175_13065 N175_13065 SM00766 DNA primase DnaG DnaB-binding N175_13080 SM00530 Helix-turn-helix XRE-family like proteins N175_13235 SM00857 Resolvase, N terminal domain N175_13260 SM00530 Helix-turn-helix XRE-family like proteins N175_13280 SM00382 ATPases associated with a variety of cellular activities N175_13340 SM00530 Helix-turn-helix XRE-family like proteins N175_13375 SM00482 DNA polymerase A domain N175_13405 SM00886 Stress responsive A/B Barrel Domain N175_13445 SM00563 Phosphate acyltransferases N175_13450 SM00635 Bacterial Ig-like domain 2 N175_13460 SM00420 helix_turn_helix, Deoxyribose operon repressor N175_13460 SM01134 N175_13460 N175_13480 SM00267 diguanylate cyclase N175_13515 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain N175_13535 SM00731 SprT homologues. N175_13560 SM00732 Likely ribonuclease with RNase H fold. N175_13590 SM01152 N175_13590 N175_13605 SM00729 Elongator protein 3, MiaB family, Radical SAM N175_13620 SM00478 endonuclease III N175_13620 SM00525 N175_13620 N175_13680 SM00271 DnaJ molecular chaperone homology domain N175_13705 SM00650 Ribosomal RNA adenine dimethylases N175_13825 SM00530 Helix-turn-helix XRE-family like proteins N175_13925 SM00316 Ribosomal protein S1-like RNA-binding domain N175_13950 SM00560 LamG-like jellyroll fold domain N175_13995 SM00382 ATPases associated with a variety of cellular activities N175_14000 SM00028 Tetratricopeptide repeats N175_14010 SM00965 Secretin and TonB N terminus short domain N175_14030 SM00052 Putative diguanylate phosphodiesterase N175_14030 SM00267 diguanylate cyclase N175_14040 SM00421 helix_turn_helix, Lux Regulon N175_14060 SM00116 Domain in cystathionine beta-synthase and other proteins. N175_14060 SM00924 MgtE intracellular N domain N175_14085 SM01018 B12 binding domain N175_14170 SM01005 Alanine racemase, C-terminal domain N175_14175 SM00382 ATPases associated with a variety of cellular activities N175_14210 SM00838 Elongation factor G C-terminus N175_14210 SM00889 Elongation factor G, domain IV N175_14250 SM00320 WD40 repeats N175_14265 SM00244 prohibitin homologues N175_14270 SM00244 prohibitin homologues N175_14290 SM00853 MutL C terminal dimerisation domain N175_14290 SM01340 N175_14290 N175_14295 SM00257 Lysin motif N175_14295 SM00646 N175_14295 N175_14320 SM00479 N175_14320 N175_14340 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N175_14340 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N175_14385 SM00663 RNA polymerase I subunit A N-terminus N175_14410 SM00649 Ribosomal protein L11/L12 N175_14415 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. N175_14415 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. N175_14470 SM00155 Phospholipase D. Active site motifs. N175_14580 SM00360 RNA recognition motif N175_14665 SM00479 N175_14665 N175_14680 SM00530 Helix-turn-helix XRE-family like proteins N175_14730 SM00881 CoA binding domain N175_14765 SM00448 cheY-homologous receiver domain N175_14765 SM00862 Transcriptional regulatory protein, C terminal N175_14770 SM00387 Histidine kinase-like ATPases N175_14770 SM00388 His Kinase A (phosphoacceptor) domain N175_14780 SM01002 Alanine dehydrogenase/PNT, C-terminal domain N175_14780 SM01003 Alanine dehydrogenase/PNT, N-terminal domain N175_14795 SM00267 diguanylate cyclase N175_14800 SM00357 Cold shock protein domain N175_14810 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N175_14810 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N175_14850 SM00382 ATPases associated with a variety of cellular activities N175_14875 SM00782 PhnA Zinc-Ribbon N175_14910 SM00116 Domain in cystathionine beta-synthase and other proteins. N175_14930 SM00345 helix_turn_helix gluconate operon transcriptional repressor N175_14930 SM00866 N175_14930 N175_14980 SM00852 Probable molybdopterin binding domain N175_14990 SM00450 Rhodanese Homology Domain N175_14995 SM00636 N175_14995 N175_15010 SM00861 Transketolase, pyrimidine binding domain N175_15035 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N175_15040 SM00867 YceI-like domain N175_15055 SM00052 Putative diguanylate phosphodiesterase N175_15060 SM00382 ATPases associated with a variety of cellular activities N175_15110 SM00062 Bacterial periplasmic substrate-binding proteins N175_15110 SM00267 diguanylate cyclase N175_15135 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor N175_15145 SM00448 cheY-homologous receiver domain N175_15150 SM00052 Putative diguanylate phosphodiesterase N175_15150 SM00267 diguanylate cyclase N175_15150 SM00448 cheY-homologous receiver domain N175_15155 SM00387 Histidine kinase-like ATPases N175_15155 SM00388 His Kinase A (phosphoacceptor) domain N175_15160 SM00387 Histidine kinase-like ATPases N175_15170 SM00448 cheY-homologous receiver domain N175_15175 SM00448 cheY-homologous receiver domain N175_15185 SM00267 diguanylate cyclase N175_15185 SM00448 cheY-homologous receiver domain N175_15195 SM00382 ATPases associated with a variety of cellular activities N175_15225 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) N175_15225 SM00267 diguanylate cyclase N175_15235 SM00495 Chitin-binding domain type 3 N175_15235 SM00636 N175_15235 N175_15240 SM00342 helix_turn_helix, arabinose operon control protein N175_15250 SM00448 cheY-homologous receiver domain N175_15255 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N175_15255 SM00387 Histidine kinase-like ATPases N175_15255 SM00388 His Kinase A (phosphoacceptor) domain N175_15275 SM00387 Histidine kinase-like ATPases N175_15275 SM00388 His Kinase A (phosphoacceptor) domain N175_15275 SM00448 cheY-homologous receiver domain N175_15285 SM00851 MGS-like domain N175_15325 SM00387 Histidine kinase-like ATPases N175_15325 SM00388 His Kinase A (phosphoacceptor) domain N175_15325 SM00448 cheY-homologous receiver domain N175_15470 SM00382 ATPases associated with a variety of cellular activities N175_15485 SM00327 von Willebrand factor (vWF) type A domain N175_15490 SM00382 ATPases associated with a variety of cellular activities N175_15510 SM00487 DEAD-like helicases superfamily N175_15510 SM00490 helicase superfamily c-terminal domain N175_15525 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N175_15540 SM00796 Allophanate hydrolase subunit 1 N175_15545 SM00797 Allophanate hydrolase subunit 2 N175_15560 SM00382 ATPases associated with a variety of cellular activities N175_15575 SM00052 Putative diguanylate phosphodiesterase N175_15575 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. N175_15575 SM00267 diguanylate cyclase N175_15585 SM00271 DnaJ molecular chaperone homology domain N175_15630 SM00052 Putative diguanylate phosphodiesterase N175_15630 SM00267 diguanylate cyclase N175_15635 SM01057 Eukaryotic-type carbonic anhydrase N175_15645 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N175_15645 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N175_15660 SM00028 Tetratricopeptide repeats N175_15665 SM00116 Domain in cystathionine beta-synthase and other proteins. N175_15665 SM00382 ATPases associated with a variety of cellular activities N175_15680 SM00347 helix_turn_helix multiple antibiotic resistance protein N175_15695 SM00924 MgtE intracellular N domain N175_15765 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N175_15765 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N175_15770 SM00642 Alpha-amylase domain N175_15785 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N175_15785 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N175_15805 SM00327 von Willebrand factor (vWF) type A domain N175_15810 SM00028 Tetratricopeptide repeats N175_15825 SM00267 diguanylate cyclase N175_15835 SM00507 HNH nucleases N175_15860 SM00829 Enoylreductase N175_15890 SM00421 helix_turn_helix, Lux Regulon N175_15890 SM00448 cheY-homologous receiver domain N175_15910 SM00481 DNA polymerase alpha chain like domain N175_15915 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. N175_15935 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain N175_15940 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor N175_15975 SM00387 Histidine kinase-like ATPases N175_15975 SM00388 His Kinase A (phosphoacceptor) domain N175_15975 SM00448 cheY-homologous receiver domain N175_15980 SM01240 N175_15980 N175_15995 SM00448 cheY-homologous receiver domain N175_16015 SM00357 Cold shock protein domain N175_16020 SM01322 N175_16020 N175_16035 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. N175_16035 SM00382 ATPases associated with a variety of cellular activities N175_16075 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. N175_16100 SM00421 helix_turn_helix, Lux Regulon N175_16100 SM00448 cheY-homologous receiver domain N175_16120 SM00342 helix_turn_helix, arabinose operon control protein N175_16130 SM00091 PAS domain N175_16130 SM00267 diguanylate cyclase N175_16135 SM00420 helix_turn_helix, Deoxyribose operon repressor N175_16135 SM01134 N175_16135 N175_16140 SM00421 helix_turn_helix, Lux Regulon N175_16175 SM00382 ATPases associated with a variety of cellular activities N175_16180 SM00421 helix_turn_helix, Lux Regulon N175_16190 SM00260 Two component signalling adaptor domain N175_16190 SM00448 cheY-homologous receiver domain N175_16200 SM00267 diguanylate cyclase N175_16210 SM00530 Helix-turn-helix XRE-family like proteins N175_16215 SM00267 diguanylate cyclase N175_16215 SM01079 N175_16215 N175_16235 SM00267 diguanylate cyclase N175_16250 SM00062 Bacterial periplasmic substrate-binding proteins N175_16270 SM00382 ATPases associated with a variety of cellular activities N175_16280 SM00062 Bacterial periplasmic substrate-binding proteins N175_16280 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. N175_16350 SM00052 Putative diguanylate phosphodiesterase N175_16350 SM00267 diguanylate cyclase N175_16380 SM00267 diguanylate cyclase N175_16385 SM00382 ATPases associated with a variety of cellular activities N175_16410 SM00345 helix_turn_helix gluconate operon transcriptional repressor N175_16425 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. N175_16450 SM00495 Chitin-binding domain type 3 N175_16480 SM00822 N175_16480 N175_16490 SM00382 ATPases associated with a variety of cellular activities N175_16515 SM00342 helix_turn_helix, arabinose operon control protein N175_16550 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N175_16565 SM00354 helix_turn _helix lactose operon repressor N175_16575 SM00382 ATPases associated with a variety of cellular activities N175_16595 SM00354 helix_turn _helix lactose operon repressor N175_16615 SM00849 Metallo-beta-lactamase superfamily N175_16625 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N175_16625 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N175_16650 SM01350 N175_16650 N175_16665 SM00849 Metallo-beta-lactamase superfamily N175_16675 SM00354 helix_turn _helix lactose operon repressor N175_16695 SM00382 ATPases associated with a variety of cellular activities N175_16735 SM00642 Alpha-amylase domain N175_16750 SM00421 helix_turn_helix, Lux Regulon N175_16760 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N175_16760 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N175_16760 SM01049 N175_16760 N175_16770 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N175_16800 SM00344 helix_turn_helix ASNC type N175_16805 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N175_16805 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N175_16830 SM00342 helix_turn_helix, arabinose operon control protein N175_16845 SM00421 helix_turn_helix, Lux Regulon N175_16865 SM00052 Putative diguanylate phosphodiesterase N175_16865 SM00267 diguanylate cyclase N175_16870 SM00382 ATPases associated with a variety of cellular activities N175_16880 SM00331 Sigma factor PP2C-like phosphatases N175_16880 SM00448 cheY-homologous receiver domain N175_16890 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N175_16895 SM00448 cheY-homologous receiver domain N175_16905 SM00138 Methyltransferase, chemotaxis proteins N175_16910 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N175_16910 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N175_16915 SM00260 Two component signalling adaptor domain N175_16920 SM00260 Two component signalling adaptor domain N175_16925 SM00073 Histidine Phosphotransfer domain N175_16925 SM00260 Two component signalling adaptor domain N175_16925 SM00387 Histidine kinase-like ATPases N175_16925 SM01231 N175_16925 N175_16930 SM00448 cheY-homologous receiver domain N175_16960 SM00470 ParB-like nuclease domain N175_17080 SM00342 helix_turn_helix, arabinose operon control protein N175_17080 SM01009 AlkA N-terminal domain N175_17180 SM00347 helix_turn_helix multiple antibiotic resistance protein N175_17190 SM00052 Putative diguanylate phosphodiesterase N175_17200 SM00450 Rhodanese Homology Domain N175_17210 SM00382 ATPases associated with a variety of cellular activities N175_17225 SM00382 ATPases associated with a variety of cellular activities N175_17250 SM00345 helix_turn_helix gluconate operon transcriptional repressor N175_17250 SM00866 N175_17250 N175_17255 SM00487 DEAD-like helicases superfamily N175_17255 SM00490 helicase superfamily c-terminal domain N175_17290 SM00829 Enoylreductase N175_17310 SM00448 cheY-homologous receiver domain N175_17310 SM00862 Transcriptional regulatory protein, C terminal N175_17315 SM00387 Histidine kinase-like ATPases N175_17385 SM00382 ATPases associated with a variety of cellular activities N175_17385 SM01086 C-terminal, D2-small domain, of ClpB protein N175_17390 SM00382 ATPases associated with a variety of cellular activities N175_17485 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins N175_17485 SM00495 Chitin-binding domain type 3 N175_17485 SM00636 N175_17485 N175_17490 SM00345 helix_turn_helix gluconate operon transcriptional repressor N175_17495 SM00382 ATPases associated with a variety of cellular activities N175_17505 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N175_17505 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N175_17520 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N175_17520 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N175_17535 SM00014 Acid phosphatase homologues N175_17545 SM00382 ATPases associated with a variety of cellular activities N175_17570 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family N175_17580 SM01007 Class II Aldolase and Adducin N-terminal domain N175_17595 SM00420 helix_turn_helix, Deoxyribose operon repressor N175_17595 SM01134 N175_17595 N175_17605 SM00642 Alpha-amylase domain N175_17635 SM00642 Alpha-amylase domain N175_17640 SM00671 Sel1-like repeats. N175_17705 SM00267 diguanylate cyclase N175_17710 SM00028 Tetratricopeptide repeats N175_17730 SM00422 helix_turn_helix, mercury resistance N175_17740 SM00257 Lysin motif N175_17750 SM00487 DEAD-like helicases superfamily N175_17750 SM00490 helicase superfamily c-terminal domain N175_17850 SM00642 Alpha-amylase domain N175_17865 SM00382 ATPases associated with a variety of cellular activities N175_17890 SM00448 cheY-homologous receiver domain N175_17890 SM00850 LytTr DNA-binding domain N175_17895 SM00052 Putative diguanylate phosphodiesterase N175_17915 SM00448 cheY-homologous receiver domain N175_17915 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. N175_17920 SM00073 Histidine Phosphotransfer domain N175_17920 SM00091 PAS domain N175_17920 SM00387 Histidine kinase-like ATPases N175_17920 SM00388 His Kinase A (phosphoacceptor) domain N175_17920 SM00448 cheY-homologous receiver domain N175_17925 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N175_17925 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N175_17950 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain N175_17955 SM00387 Histidine kinase-like ATPases N175_17955 SM00388 His Kinase A (phosphoacceptor) domain N175_17955 SM00448 cheY-homologous receiver domain N175_18005 SM01266 N175_18005 N175_18055 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N175_18055 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N175_18065 SM00342 helix_turn_helix, arabinose operon control protein N175_18070 SM00448 cheY-homologous receiver domain N175_18075 SM00387 Histidine kinase-like ATPases N175_18105 SM00344 helix_turn_helix ASNC type N175_18115 SM00458 Ricin-type beta-trefoil N175_18130 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins N175_18170 SM00382 ATPases associated with a variety of cellular activities N175_18185 SM00421 helix_turn_helix, Lux Regulon N175_18190 SM00382 ATPases associated with a variety of cellular activities N175_18230 SM00422 helix_turn_helix, mercury resistance N175_18235 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). N175_18235 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N175_18315 SM00530 Helix-turn-helix XRE-family like proteins N175_18325 SM00020 Trypsin-like serine protease N175_18360 SM00354 helix_turn _helix lactose operon repressor N175_18375 SM00387 Histidine kinase-like ATPases N175_18375 SM00448 cheY-homologous receiver domain N175_18400 SM00382 ATPases associated with a variety of cellular activities N175_18485 SM00420 helix_turn_helix, Deoxyribose operon repressor N175_18485 SM01134 N175_18485 N175_18505 SM00382 ATPases associated with a variety of cellular activities N175_18540 SM00642 Alpha-amylase domain N175_18585 SM00926 Molybdopterin oxidoreductase Fe4S4 domain N175_18600 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain N175_18600 SM00387 Histidine kinase-like ATPases N175_18605 SM00421 helix_turn_helix, Lux Regulon N175_18605 SM00448 cheY-homologous receiver domain N175_18645 SM00316 Ribosomal protein S1-like RNA-binding domain N175_18645 SM00357 Cold shock protein domain N175_18645 SM00955 N175_18645 N175_18650 SM00487 DEAD-like helicases superfamily N175_18650 SM00490 helicase superfamily c-terminal domain N175_18655 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain N175_19245 SM00382 ATPases associated with a variety of cellular activities N175_19320 SM00857 Resolvase, N terminal domain N175_19415 SM00382 ATPases associated with a variety of cellular activities N175_19420 SM00382 ATPases associated with a variety of cellular activities N175_19480 SM00470 ParB-like nuclease domain