locus-tag class description A6A12_0001 PF00009 Elongation factor Tu GTP binding domain A6A12_0001 PF03143 Elongation factor Tu C-terminal domain A6A12_0001 PF03144 Elongation factor Tu domain 2 A6A12_0002 PF00584 SecE/Sec61-gamma subunits of protein translocation complex A6A12_0003 PF02357 Transcription termination factor nusG A6A12_0003 PF00467 KOW motif A6A12_0004 PF03946 Ribosomal protein L11, N-terminal domain A6A12_0004 PF00298 Ribosomal protein L11, RNA binding domain A6A12_0005 PF00687 Ribosomal protein L1p/L10e family A6A12_0006 PF00466 Ribosomal protein L10 A6A12_0007 PF00542 Ribosomal protein L7/L12 C-terminal domain A6A12_0007 PF16320 Ribosomal protein L7/L12 dimerisation domain A6A12_0008 PF00562 RNA polymerase Rpb2, domain 6 A6A12_0008 PF10385 RNA polymerase beta subunit external 1 domain A6A12_0008 PF04565 RNA polymerase Rpb2, domain 3 A6A12_0008 PF04560 RNA polymerase Rpb2, domain 7 A6A12_0008 PF04561 RNA polymerase Rpb2, domain 2 A6A12_0008 PF04563 RNA polymerase beta subunit A6A12_0009 PF04983 RNA polymerase Rpb1, domain 3 A6A12_0009 PF05000 RNA polymerase Rpb1, domain 4 A6A12_0009 PF04998 RNA polymerase Rpb1, domain 5 A6A12_0009 PF00623 RNA polymerase Rpb1, domain 2 A6A12_0009 PF04997 RNA polymerase Rpb1, domain 1 A6A12_0010 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ A6A12_0011 PF00293 NUDIX domain A6A12_0011 PF09297 NADH pyrophosphatase zinc ribbon domain A6A12_0012 PF01208 Uroporphyrinogen decarboxylase (URO-D) A6A12_0013 PF08360 QacR-like protein, C-terminal region A6A12_0013 PF00440 Bacterial regulatory proteins, tetR family A6A12_0015 PF01551 Peptidase family M23 A6A12_0017 PF06415 BPG-independent PGAM N-terminus (iPGM_N) A6A12_0017 PF01676 Metalloenzyme superfamily A6A12_0019 PF00672 HAMP domain A6A12_0019 PF02743 Cache domain A6A12_0019 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6A12_0020 PF03600 Citrate transporter A6A12_0020 PF02080 TrkA-C domain A6A12_0021 PF02666 Phosphatidylserine decarboxylase A6A12_0022 PF03193 RsgA GTPase A6A12_0023 PF00929 Exonuclease A6A12_0026 PF08331 Domain of unknown function (DUF1730) A6A12_0027 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE A6A12_0028 PF01520 N-acetylmuramoyl-L-alanine amidase A6A12_0029 PF01119 DNA mismatch repair protein, C-terminal domain A6A12_0029 PF08676 MutL C terminal dimerisation domain A6A12_0031 PF17209 Hfq protein A6A12_0032 PF01926 50S ribosome-binding GTPase A6A12_0032 PF13167 GTP-binding GTPase N-terminal A6A12_0032 PF16360 GTP-binding GTPase Middle Region A6A12_0033 PF12221 Bacterial membrane protein N terminal A6A12_0033 PF01145 SPFH domain / Band 7 family A6A12_0034 PF01145 SPFH domain / Band 7 family A6A12_0035 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) A6A12_0036 PF04102 SlyX A6A12_0038 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase A6A12_0038 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A6A12_0039 PF08348 YheO-like PAS domain A6A12_0039 PF13309 HTH domain A6A12_0040 PF02635 DsrE/DsrF-like family A6A12_0041 PF02635 DsrE/DsrF-like family A6A12_0042 PF04077 DsrH like protein A6A12_0043 PF00164 Ribosomal protein S12/S23 A6A12_0044 PF00177 Ribosomal protein S7p/S5e A6A12_0045 PF00009 Elongation factor Tu GTP binding domain A6A12_0045 PF00679 Elongation factor G C-terminus A6A12_0045 PF14492 Elongation Factor G, domain II A6A12_0045 PF03764 Elongation factor G, domain IV A6A12_0045 PF03144 Elongation factor Tu domain 2 A6A12_0046 PF03143 Elongation factor Tu C-terminal domain A6A12_0046 PF03144 Elongation factor Tu domain 2 A6A12_0046 PF00009 Elongation factor Tu GTP binding domain A6A12_0047 PF01250 Ribosomal protein S6 A6A12_0048 PF00436 Single-strand binding protein family A6A12_0049 PF01084 Ribosomal protein S18 A6A12_0050 PF01281 Ribosomal protein L9, N-terminal domain A6A12_0050 PF03948 Ribosomal protein L9, C-terminal domain A6A12_0052 PF00772 DnaB-like helicase N terminal domain A6A12_0052 PF03796 DnaB-like helicase C terminal domain A6A12_0053 PF00842 Alanine racemase, C-terminal domain A6A12_0053 PF01168 Alanine racemase, N-terminal domain A6A12_0055 PF00342 Phosphoglucose isomerase A6A12_0056 PF03050 Transposase IS66 family A6A12_0056 PF13817 IS66 C-terminal element A6A12_0056 PF13007 Transposase C of IS166 homeodomain A6A12_0056 PF13005 zinc-finger binding domain of transposase IS66 A6A12_0060 PF01475 Ferric uptake regulator family A6A12_0061 PF01207 Dihydrouridine synthase (Dus) A6A12_0065 PF00175 Oxidoreductase NAD-binding domain A6A12_0065 PF00258 Flavodoxin A6A12_0065 PF00667 FAD binding domain A6A12_0066 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain A6A12_0066 PF01077 Nitrite and sulphite reductase 4Fe-4S domain A6A12_0067 PF01507 Phosphoadenosine phosphosulfate reductase family A6A12_0078 PF00999 Sodium/hydrogen exchanger family A6A12_0079 PF02965 Vitamin B12 dependent methionine synthase, activation domain A6A12_0079 PF00809 Pterin binding enzyme A6A12_0079 PF02607 B12 binding domain A6A12_0079 PF02574 Homocysteine S-methyltransferase A6A12_0079 PF02310 B12 binding domain A6A12_0080 PF00696 Amino acid kinase family A6A12_0080 PF01842 ACT domain A6A12_0082 PF00266 Aminotransferase class-V A6A12_0085 PF00571 CBS domain A6A12_0085 PF03448 MgtE intracellular N domain A6A12_0085 PF01769 Divalent cation transporter A6A12_0087 PF17760 UvrA interaction domain A6A12_0087 PF17755 UvrA DNA-binding domain A6A12_0087 PF00005 ABC transporter A6A12_0088 PF00483 Nucleotidyl transferase A6A12_0089 PF00196 Bacterial regulatory proteins, luxR family A6A12_0090 PF00436 Single-strand binding protein family A6A12_0091 PF00990 Diguanylate cyclase, GGDEF domain A6A12_0091 PF17157 Gammaproteobacterial periplasmic sensor domain A6A12_0091 PF00563 EAL domain A6A12_0095 PF00263 Bacterial type II and III secretion system protein A6A12_0095 PF03958 Bacterial type II/III secretion system short domain A6A12_0096 PF13401 AAA domain A6A12_0096 PF01471 Putative peptidoglycan binding domain A6A12_0098 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain A6A12_0098 PF00437 Type II/IV secretion system protein A6A12_0099 PF00482 Type II secretion system (T2SS), protein F A6A12_0101 PF07963 Prokaryotic N-terminal methylation motif A6A12_0101 PF00114 Pilin (bacterial filament) A6A12_0109 PF04085 rod shape-determining protein MreC A6A12_0110 PF04093 rod shape-determining protein MreD A6A12_0111 PF02545 Maf-like protein A6A12_0112 PF00575 S1 RNA binding domain A6A12_0112 PF10150 Ribonuclease E/G family A6A12_0113 PF13502 AsmA-like C-terminal region A6A12_0113 PF13116 Protein of unknown function A6A12_0114 PF00795 Carbon-nitrogen hydrolase A6A12_0115 PF01523 Putative modulator of DNA gyrase A6A12_0118 PF06877 Regulator of ribonuclease activity B A6A12_0121 PF00582 Universal stress protein family A6A12_0123 PF16868 NMT1-like family A6A12_0125 PF00056 lactate/malate dehydrogenase, NAD binding domain A6A12_0125 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain A6A12_0126 PF13520 Amino acid permease A6A12_0127 PF00348 Polyprenyl synthetase A6A12_0129 PF01016 Ribosomal L27 protein A6A12_0130 PF01926 50S ribosome-binding GTPase A6A12_0130 PF01018 GTP1/OBG A6A12_0131 PF06738 Putative threonine/serine exporter A6A12_0132 PF12821 Threonine/Serine exporter, ThrE A6A12_0133 PF00186 Dihydrofolate reductase A6A12_0134 PF00149 Calcineurin-like phosphoesterase A6A12_0135 PF04379 ApaG domain A6A12_0136 PF00398 Ribosomal RNA adenine dimethylase A6A12_0137 PF04166 Pyridoxal phosphate biosynthetic protein PdxA A6A12_0138 PF09312 SurA N-terminal domain A6A12_0139 PF04453 LPS transport system D A6A12_0139 PF03968 OstA-like protein A6A12_0140 PF00226 DnaJ domain A6A12_0140 PF05099 Tellurite resistance protein TerB A6A12_0151 PF01464 Transglycosylase SLT domain A6A12_0151 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain A6A12_0152 PF04362 Bacterial Fe(2+) trafficking A6A12_0153 PF00730 HhH-GPD superfamily base excision DNA repair protein A6A12_0153 PF00633 Helix-hairpin-helix motif A6A12_0153 PF14815 NUDIX domain A6A12_0154 PF02390 Putative methyltransferase A6A12_0155 PF04960 Glutaminase A6A12_0156 PF04055 Radical SAM superfamily A6A12_0156 PF06969 HemN C-terminal domain A6A12_0157 PF01725 Ham1 family A6A12_0159 PF02594 Uncharacterised ACR, YggU family COG1872 A6A12_0160 PF02325 YGGT family A6A12_0161 PF03807 NADP oxidoreductase coenzyme F420-dependent A6A12_0161 PF14748 Pyrroline-5-carboxylate reductase dimerisation A6A12_0162 PF01168 Alanine racemase, N-terminal domain A6A12_0163 PF00437 Type II/IV secretion system protein A6A12_0164 PF00437 Type II/IV secretion system protein A6A12_0165 PF03652 Holliday junction resolvase A6A12_0166 PF02622 Uncharacterized ACR, COG1678 A6A12_0167 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain A6A12_0167 PF02951 Prokaryotic glutathione synthetase, N-terminal domain A6A12_0168 PF04452 RNA methyltransferase A6A12_0169 PF04231 Endonuclease I A6A12_0170 PF17283 SprT-like zinc ribbon domain A6A12_0170 PF10263 SprT-like family A6A12_0171 PF02773 S-adenosylmethionine synthetase, C-terminal domain A6A12_0171 PF02772 S-adenosylmethionine synthetase, central domain A6A12_0171 PF00438 S-adenosylmethionine synthetase, N-terminal domain A6A12_0173 PF02779 Transketolase, pyrimidine binding domain A6A12_0173 PF02780 Transketolase, C-terminal domain A6A12_0173 PF00456 Transketolase, thiamine diphosphate binding domain A6A12_0174 PF03466 LysR substrate binding domain A6A12_0174 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6A12_0175 PF07715 TonB-dependent Receptor Plug Domain A6A12_0175 PF00593 TonB dependent receptor A6A12_0177 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain A6A12_0177 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A6A12_0178 PF00162 Phosphoglycerate kinase A6A12_0179 PF01116 Fructose-bisphosphate aldolase class-II A6A12_0181 PF05552 Conserved TM helix A6A12_0181 PF00924 Mechanosensitive ion channel A6A12_0182 PF01810 LysE type translocator A6A12_0183 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6A12_0183 PF03466 LysR substrate binding domain A6A12_0185 PF00990 Diguanylate cyclase, GGDEF domain A6A12_0185 PF17158 Membrane-associated sensor, integral membrane domain A6A12_0186 PF02887 Pyruvate kinase, alpha/beta domain A6A12_0186 PF00224 Pyruvate kinase, barrel domain A6A12_0188 PF00455 DeoR C terminal sensor domain A6A12_0188 PF08220 DeoR-like helix-turn-helix domain A6A12_0189 PF01380 SIS domain A6A12_0191 PF11999 Protein of unknown function (DUF3494) A6A12_0191 PF02368 Bacterial Ig-like domain (group 2) A6A12_0193 PF00472 RF-1 domain A6A12_0194 PF05638 Type VI secretion system effector, Hcp A6A12_0195 PF16671 Actin cross-linking domain A6A12_0195 PF04717 Type VI secretion system, phage-baseplate injector A6A12_0208 PF00665 Integrase core domain A6A12_0209 PF01527 Transposase A6A12_0216 PF15935 RNase LS, bacterial toxin A6A12_0218 PF02899 Phage integrase, N-terminal SAM-like domain A6A12_0218 PF00589 Phage integrase family A6A12_0224 PF01695 IstB-like ATP binding protein A6A12_0225 PF00665 Integrase core domain A6A12_0232 PF00239 Resolvase, N terminal domain A6A12_0232 PF02796 Helix-turn-helix domain of resolvase A6A12_0235 PF01420 Type I restriction modification DNA specificity domain A6A12_0236 PF02384 N-6 DNA Methylase A6A12_0236 PF12161 HsdM N-terminal domain A6A12_0237 PF00665 Integrase core domain A6A12_0237 PF13276 HTH-like domain A6A12_0237 PF13333 Integrase core domain A6A12_0240 PF13361 UvrD-like helicase C-terminal domain A6A12_0240 PF00580 UvrD/REP helicase N-terminal domain A6A12_0244 PF07804 HipA-like C-terminal domain A6A12_0244 PF13657 HipA N-terminal domain A6A12_0247 PF04539 Sigma-70 region 3 A6A12_0247 PF03979 Sigma-70 factor, region 1.1 A6A12_0247 PF04546 Sigma-70, non-essential region A6A12_0247 PF04542 Sigma-70 region 2 A6A12_0247 PF00140 Sigma-70 factor, region 1.2 A6A12_0247 PF04545 Sigma-70, region 4 A6A12_0248 PF08275 DNA primase catalytic core, N-terminal domain A6A12_0248 PF08278 DNA primase DnaG DnaB-binding A6A12_0248 PF01807 CHC2 zinc finger A6A12_0248 PF10410 DnaB-helicase binding domain of primase A6A12_0249 PF09424 Yqey-like protein A6A12_0254 PF02660 Glycerol-3-phosphate acyltransferase A6A12_0255 PF02152 Dihydroneopterin aldolase A6A12_0256 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) A6A12_0257 PF02673 Bacitracin resistance protein BacA A6A12_0258 PF04977 Septum formation initiator A6A12_0259 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase A6A12_0260 PF02542 YgbB family A6A12_0261 PF01142 tRNA pseudouridine synthase D (TruD) A6A12_0262 PF01975 Survival protein SurE A6A12_0264 PF01551 Peptidase family M23 A6A12_0264 PF01476 LysM domain A6A12_0265 PF04545 Sigma-70, region 4 A6A12_0265 PF04539 Sigma-70 region 3 A6A12_0265 PF04542 Sigma-70 region 2 A6A12_0265 PF00140 Sigma-70 factor, region 1.2 A6A12_0266 PF01624 MutS domain I A6A12_0266 PF00488 MutS domain V A6A12_0266 PF05190 MutS family domain IV A6A12_0266 PF05192 MutS domain III A6A12_0266 PF05188 MutS domain II A6A12_0267 PF00291 Pyridoxal-phosphate dependent enzyme A6A12_0269 PF00528 Binding-protein-dependent transport system inner membrane component A6A12_0270 PF00528 Binding-protein-dependent transport system inner membrane component A6A12_0271 PF00005 ABC transporter A6A12_0271 PF12857 TOBE-like domain A6A12_0272 PF02464 Competence-damaged protein A6A12_0273 PF00154 recA bacterial DNA recombination protein A6A12_0274 PF02631 RecX family A6A12_0275 PF02272 DHHA1 domain A6A12_0275 PF01411 tRNA synthetases class II (A) A6A12_0275 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain A6A12_0276 PF00696 Amino acid kinase family A6A12_0276 PF13840 ACT domain A6A12_0276 PF01842 ACT domain A6A12_0283 PF04277 Oxaloacetate decarboxylase, gamma chain A6A12_0284 PF00364 Biotin-requiring enzyme A6A12_0284 PF02436 Conserved carboxylase domain A6A12_0284 PF00682 HMGL-like A6A12_0285 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit A6A12_0286 PF00107 Zinc-binding dehydrogenase A6A12_0286 PF08240 Alcohol dehydrogenase GroES-like domain A6A12_0287 PF09335 SNARE associated Golgi protein A6A12_0288 PF05193 Peptidase M16 inactive domain A6A12_0288 PF00675 Insulinase (Peptidase family M16) A6A12_0289 PF04262 Glutamate-cysteine ligase A6A12_0291 PF00571 CBS domain A6A12_0291 PF03471 Transporter associated domain A6A12_0291 PF01595 Cyclin M transmembrane N-terminal domain A6A12_0292 PF01578 Cytochrome C assembly protein A6A12_0293 PF00448 SRP54-type protein, GTPase domain A6A12_0293 PF02881 SRP54-type protein, helical bundle domain A6A12_0293 PF02978 Signal peptide binding domain A6A12_0296 PF01746 tRNA (Guanine-1)-methyltransferase A6A12_0297 PF01245 Ribosomal protein L19 A6A12_0298 PF03884 DNA gyrase inhibitor YacG A6A12_0299 PF07072 Cell division protein A6A12_0300 PF01121 Dephospho-CoA kinase A6A12_0301 PF01478 Type IV leader peptidase family A6A12_0301 PF06750 Bacterial Peptidase A24 N-terminal domain A6A12_0302 PF00482 Type II secretion system (T2SS), protein F A6A12_0303 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain A6A12_0303 PF00437 Type II/IV secretion system protein A6A12_0305 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain A6A12_0305 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain A6A12_0306 PF01510 N-acetylmuramoyl-L-alanine amidase A6A12_0307 PF00258 Flavodoxin A6A12_0308 PF02899 Phage integrase, N-terminal SAM-like domain A6A12_0308 PF00589 Phage integrase family A6A12_0309 PF13098 Thioredoxin-like domain A6A12_0309 PF10411 Disulfide bond isomerase protein N-terminus A6A12_0310 PF02272 DHHA1 domain A6A12_0310 PF17768 RecJ OB domain A6A12_0310 PF01368 DHH family A6A12_0311 PF07729 FCD domain A6A12_0311 PF00392 Bacterial regulatory proteins, gntR family A6A12_0312 PF00456 Transketolase, thiamine diphosphate binding domain A6A12_0312 PF17831 Pyruvate dehydrogenase E1 component middle domain A6A12_0313 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) A6A12_0313 PF00364 Biotin-requiring enzyme A6A12_0313 PF02817 e3 binding domain A6A12_0314 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A6A12_0314 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6A12_0315 PF00440 Bacterial regulatory proteins, tetR family A6A12_0316 PF00156 Phosphoribosyl transferase domain A6A12_0317 PF00484 Carbonic anhydrase A6A12_0318 PF01740 STAS domain A6A12_0318 PF00916 Sulfate permease family A6A12_0319 PF00005 ABC transporter A6A12_0320 PF01061 ABC-2 type transporter A6A12_0322 PF02569 Pantoate-beta-alanine ligase A6A12_0323 PF02548 Ketopantoate hydroxymethyltransferase A6A12_0324 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) A6A12_0325 PF12627 Probable RNA and SrmB- binding site of polymerase A A6A12_0325 PF12626 Polymerase A arginine-rich C-terminus A6A12_0325 PF01743 Poly A polymerase head domain A6A12_0326 PF00749 tRNA synthetases class I (E and Q), catalytic domain A6A12_0327 PF01258 Prokaryotic dksA/traR C4-type zinc finger A6A12_0328 PF03749 Sugar fermentation stimulation protein RE domain A6A12_0328 PF17746 SfsA N-terminal OB domain A6A12_0329 PF08482 ATP-dependent helicase C-terminal A6A12_0329 PF00271 Helicase conserved C-terminal domain A6A12_0329 PF04408 Helicase associated domain (HA2) A6A12_0329 PF00270 DEAD/DEAH box helicase A6A12_0330 PF14814 Bifunctional transglycosylase second domain A6A12_0330 PF00912 Transglycosylase A6A12_0330 PF00905 Penicillin binding protein transpeptidase domain A6A12_0331 PF01734 Patatin-like phospholipase A6A12_0332 PF00330 Aconitase family (aconitate hydratase) A6A12_0332 PF06434 Aconitate hydratase 2 N-terminus A6A12_0332 PF11791 Aconitate B N-terminal domain A6A12_0334 PF02595 Glycerate kinase family A6A12_0335 PF02447 GntP family permease A6A12_0336 PF05651 Putative sugar diacid recognition A6A12_0336 PF17853 GGDEF-like domain A6A12_0336 PF13556 PucR C-terminal helix-turn-helix domain A6A12_0337 PF06062 Uncharacterised protein family (UPF0231) A6A12_0338 PF00543 Nitrogen regulatory protein P-II A6A12_0339 PF00909 Ammonium Transporter Family A6A12_0340 PF13416 Bacterial extracellular solute-binding protein A6A12_0342 PF08402 TOBE domain A6A12_0342 PF00005 ABC transporter A6A12_0343 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A6A12_0343 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A6A12_0343 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A6A12_0344 PF06165 Glycosyltransferase family 36 A6A12_0344 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain A6A12_0345 PF00728 Glycosyl hydrolase family 20, catalytic domain A6A12_0345 PF02838 Glycosyl hydrolase family 20, domain 2 A6A12_0346 PF01869 BadF/BadG/BcrA/BcrD ATPase family A6A12_0348 PF00005 ABC transporter A6A12_0348 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A6A12_0349 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A6A12_0349 PF00005 ABC transporter A6A12_0350 PF12911 N-terminal TM domain of oligopeptide transport permease C A6A12_0350 PF00528 Binding-protein-dependent transport system inner membrane component A6A12_0351 PF00528 Binding-protein-dependent transport system inner membrane component A6A12_0352 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A6A12_0353 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6A12_0353 PF09308 LuxQ, periplasmic A6A12_0353 PF00512 His Kinase A (phospho-acceptor) domain A6A12_0353 PF00072 Response regulator receiver domain A6A12_0354 PF05175 Methyltransferase small domain A6A12_0354 PF08468 Methyltransferase small domain N-terminal A6A12_0355 PF01594 AI-2E family transporter A6A12_0357 PF00202 Aminotransferase class-III A6A12_0358 PF01521 Iron-sulphur cluster biosynthesis A6A12_0360 PF00873 AcrB/AcrD/AcrF family A6A12_0361 PF01476 LysM domain A6A12_0361 PF08525 Opacity-associated protein A N-terminal motif A6A12_0361 PF01551 Peptidase family M23 A6A12_0362 PF00579 tRNA synthetases class I (W and Y) A6A12_0362 PF01479 S4 domain A6A12_0363 PF03448 MgtE intracellular N domain A6A12_0363 PF00571 CBS domain A6A12_0363 PF01769 Divalent cation transporter A6A12_0364 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family A6A12_0365 PF13609 Gram-negative porin A6A12_0366 PF01272 Transcription elongation factor, GreA/GreB, C-term A6A12_0366 PF03449 Transcription elongation factor, N-terminal A6A12_0367 PF01985 CRS1 / YhbY (CRM) domain A6A12_0368 PF01728 FtsJ-like methyltransferase A6A12_0369 PF01434 Peptidase family M41 A6A12_0369 PF06480 FtsH Extracellular A6A12_0369 PF00004 ATPase family associated with various cellular activities (AAA) A6A12_0369 PF17862 AAA+ lid domain A6A12_0370 PF00809 Pterin binding enzyme A6A12_0371 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A6A12_0371 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A6A12_0371 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A6A12_0371 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A6A12_0372 PF03840 Preprotein translocase SecG subunit A6A12_0375 PF02576 RimP N-terminal domain A6A12_0375 PF17384 RimP C-terminal SH3 domain A6A12_0376 PF00575 S1 RNA binding domain A6A12_0376 PF13184 NusA-like KH domain A6A12_0376 PF08529 NusA N-terminal domain A6A12_0377 PF04760 Translation initiation factor IF-2, N-terminal region A6A12_0377 PF08364 Bacterial translation initiation factor IF-2 associated region A6A12_0377 PF00009 Elongation factor Tu GTP binding domain A6A12_0377 PF11987 Translation-initiation factor 2 A6A12_0378 PF02033 Ribosome-binding factor A A6A12_0379 PF09157 Pseudouridine synthase II TruB, C-terminal A6A12_0379 PF16198 tRNA pseudouridylate synthase B C-terminal domain A6A12_0379 PF01509 TruB family pseudouridylate synthase (N terminal domain) A6A12_0380 PF00312 Ribosomal protein S15 A6A12_0381 PF00575 S1 RNA binding domain A6A12_0381 PF01138 3' exoribonuclease family, domain 1 A6A12_0381 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain A6A12_0381 PF00013 KH domain A6A12_0381 PF03725 3' exoribonuclease family, domain 2 A6A12_0382 PF07719 Tetratricopeptide repeat A6A12_0382 PF13181 Tetratricopeptide repeat A6A12_0383 PF01047 MarR family A6A12_0387 PF00563 EAL domain A6A12_0387 PF00990 Diguanylate cyclase, GGDEF domain A6A12_0387 PF03707 Bacterial signalling protein N terminal repeat A6A12_0389 PF13508 Acetyltransferase (GNAT) domain A6A12_0391 PF00583 Acetyltransferase (GNAT) family A6A12_0392 PF00563 EAL domain A6A12_0392 PF00990 Diguanylate cyclase, GGDEF domain A6A12_0392 PF03707 Bacterial signalling protein N terminal repeat A6A12_0393 PF03144 Elongation factor Tu domain 2 A6A12_0393 PF00009 Elongation factor Tu GTP binding domain A6A12_0393 PF16658 Class II release factor RF3, C-terminal domain A6A12_0394 PF00271 Helicase conserved C-terminal domain A6A12_0394 PF00270 DEAD/DEAH box helicase A6A12_0395 PF05175 Methyltransferase small domain A6A12_0396 PF05525 Branched-chain amino acid transport protein A6A12_0397 PF00472 RF-1 domain A6A12_0397 PF03462 PCRF domain A6A12_0398 PF01336 OB-fold nucleic acid binding domain A6A12_0398 PF00152 tRNA synthetases class II (D, K and N) A6A12_0399 PF00158 Sigma-54 interaction domain A6A12_0399 PF00072 Response regulator receiver domain A6A12_0399 PF02954 Bacterial regulatory protein, Fis family A6A12_0402 PF00248 Aldo/keto reductase family A6A12_0403 PF02976 DNA mismatch repair enzyme MutH A6A12_0404 PF00293 NUDIX domain A6A12_0405 PF01590 GAF domain A6A12_0405 PF02896 PEP-utilising enzyme, TIM barrel domain A6A12_0405 PF05524 PEP-utilising enzyme, N-terminal A6A12_0405 PF00391 PEP-utilising enzyme, mobile domain A6A12_0406 PF01925 Sulfite exporter TauE/SafE A6A12_0407 PF01790 Prolipoprotein diacylglyceryl transferase A6A12_0408 PF00303 Thymidylate synthase A6A12_0414 PF01527 Transposase A6A12_0415 PF00665 Integrase core domain A6A12_0417 PF00303 Thymidylate synthase A6A12_0419 PF02690 Na+/Pi-cotransporter A6A12_0420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6A12_0420 PF03466 LysR substrate binding domain A6A12_0421 PF01022 Bacterial regulatory protein, arsR family A6A12_0422 PF01649 Ribosomal protein S20 A6A12_0423 PF03023 Lipid II flippase MurJ A6A12_0424 PF01687 Riboflavin kinase A6A12_0424 PF06574 FAD synthetase A6A12_0425 PF00133 tRNA synthetases class I (I, L, M and V) A6A12_0425 PF06827 Zinc finger found in FPG and IleRS A6A12_0425 PF08264 Anticodon-binding domain of tRNA A6A12_0426 PF01252 Signal peptidase (SPase) II A6A12_0428 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A6A12_0429 PF02401 LytB protein A6A12_0430 PF02554 Carbon starvation protein CstA A6A12_0433 PF13580 SIS domain A6A12_0434 PF03702 Anhydro-N-acetylmuramic acid kinase A6A12_0435 PF00933 Glycosyl hydrolase family 3 N terminal domain A6A12_0436 PF04397 LytTr DNA-binding domain A6A12_0436 PF00072 Response regulator receiver domain A6A12_0437 PF06580 Histidine kinase A6A12_0437 PF07694 5TMR of 5TMR-LYT A6A12_0438 PF00793 DAHP synthetase I family A6A12_0439 PF02153 Prephenate dehydrogenase A6A12_0439 PF01817 Chorismate mutase type II A6A12_0440 PF07238 PilZ domain A6A12_0442 PF12848 ABC transporter A6A12_0442 PF00005 ABC transporter A6A12_0443 PF14718 Soluble lytic murein transglycosylase L domain A6A12_0443 PF01464 Transglycosylase SLT domain A6A12_0445 PF01931 Protein of unknown function DUF84 A6A12_0446 PF00563 EAL domain A6A12_0446 PF00990 Diguanylate cyclase, GGDEF domain A6A12_0447 PF13416 Bacterial extracellular solute-binding protein A6A12_0448 PF00800 Prephenate dehydratase A6A12_0448 PF01817 Chorismate mutase type II A6A12_0449 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein A6A12_0451 PF13525 Outer membrane lipoprotein A6A12_0452 PF01479 S4 domain A6A12_0452 PF00849 RNA pseudouridylate synthase A6A12_0454 PF00004 ATPase family associated with various cellular activities (AAA) A6A12_0454 PF10431 C-terminal, D2-small domain, of ClpB protein A6A12_0454 PF17871 AAA lid domain A6A12_0454 PF07724 AAA domain (Cdc48 subfamily) A6A12_0454 PF02861 Clp amino terminal domain, pathogenicity island component A6A12_0466 PF00881 Nitroreductase family A6A12_0467 PF00037 4Fe-4S binding domain A6A12_0469 PF04381 Putative exonuclease, RdgC A6A12_0470 PF00072 Response regulator receiver domain A6A12_0470 PF00486 Transcriptional regulatory protein, C terminal A6A12_0471 PF00512 His Kinase A (phospho-acceptor) domain A6A12_0471 PF11808 Phosphate regulon sensor protein PhoR A6A12_0471 PF00989 PAS fold A6A12_0471 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6A12_0472 PF12849 PBP superfamily domain A6A12_0473 PF02541 Ppx/GppA phosphatase family A6A12_0474 PF13089 Polyphosphate kinase N-terminal domain A6A12_0474 PF17941 Polyphosphate kinase C-terminal domain 1 A6A12_0474 PF02503 Polyphosphate kinase middle domain A6A12_0474 PF13090 Polyphosphate kinase C-terminal domain 2 A6A12_0475 PF00528 Binding-protein-dependent transport system inner membrane component A6A12_0476 PF00528 Binding-protein-dependent transport system inner membrane component A6A12_0477 PF00005 ABC transporter A6A12_0478 PF01895 PhoU domain A6A12_0479 PF03932 CutC family A6A12_0480 PF10417 C-terminal domain of 1-Cys peroxiredoxin A6A12_0480 PF00578 AhpC/TSA family A6A12_0481 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6A12_0481 PF03466 LysR substrate binding domain A6A12_0482 PF01274 Malate synthase A6A12_0484 PF00463 Isocitrate lyase family A6A12_0485 PF00571 CBS domain A6A12_0486 PF02547 Queuosine biosynthesis protein A6A12_0487 PF01702 Queuine tRNA-ribosyltransferase A6A12_0488 PF02699 Preprotein translocase subunit A6A12_0489 PF02355 Protein export membrane protein A6A12_0489 PF13721 SecD export protein N-terminal TM region A6A12_0489 PF07549 SecD/SecF GG Motif A6A12_0490 PF02355 Protein export membrane protein A6A12_0490 PF07549 SecD/SecF GG Motif A6A12_0491 PF00459 Inositol monophosphatase family A6A12_0492 PF00588 SpoU rRNA Methylase family A6A12_0493 PF02082 Transcriptional regulator A6A12_0494 PF00266 Aminotransferase class-V A6A12_0495 PF01592 NifU-like N terminal domain A6A12_0496 PF01521 Iron-sulphur cluster biosynthesis A6A12_0497 PF07743 HSCB C-terminal oligomerisation domain A6A12_0497 PF00226 DnaJ domain A6A12_0498 PF00012 Hsp70 protein A6A12_0499 PF00111 2Fe-2S iron-sulfur cluster binding domain A6A12_0500 PF04384 Iron-sulphur cluster assembly A6A12_0501 PF00883 Cytosol aminopeptidase family, catalytic domain A6A12_0501 PF12404 Peptidase A6A12_0502 PF00334 Nucleoside diphosphate kinase A6A12_0503 PF04055 Radical SAM superfamily A6A12_0505 PF13464 Domain of unknown function (DUF4115) A6A12_0506 PF04551 GcpE protein A6A12_0507 PF13393 Histidyl-tRNA synthetase A6A12_0507 PF03129 Anticodon binding domain A6A12_0508 PF09976 Tetratricopeptide repeat-like domain A6A12_0509 PF13360 PQQ-like domain A6A12_0510 PF01926 50S ribosome-binding GTPase A6A12_0510 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal A6A12_0512 PF13742 OB-fold nucleic acid binding domain A6A12_0512 PF02601 Exonuclease VII, large subunit A6A12_0513 PF00478 IMP dehydrogenase / GMP reductase domain A6A12_0513 PF00571 CBS domain A6A12_0514 PF00117 Glutamine amidotransferase class-I A6A12_0514 PF02540 NAD synthase A6A12_0514 PF00958 GMP synthase C terminal domain A6A12_0515 PF08543 Phosphomethylpyrimidine kinase A6A12_0516 PF06483 Chitinase C A6A12_0516 PF00704 Glycosyl hydrolases family 18 A6A12_0517 PF01184 GPR1/FUN34/yaaH family A6A12_0518 PF01235 Sodium:alanine symporter family A6A12_0519 PF01266 FAD dependent oxidoreductase A6A12_0520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6A12_0520 PF03466 LysR substrate binding domain A6A12_0521 PF02028 BCCT, betaine/carnitine/choline family transporter A6A12_0523 PF00141 Peroxidase A6A12_0524 PF08279 HTH domain A6A12_0524 PF05043 Mga helix-turn-helix domain A6A12_0524 PF00874 PRD domain A6A12_0524 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A6A12_0525 PF07071 KDGP aldolase A6A12_0526 PF03841 L-seryl-tRNA selenium transferase A6A12_0527 PF01979 Amidohydrolase family A6A12_0534 PF17757 UvrB interaction domain A6A12_0534 PF04851 Type III restriction enzyme, res subunit A6A12_0534 PF02151 UvrB/uvrC motif A6A12_0534 PF12344 Ultra-violet resistance protein B A6A12_0534 PF00271 Helicase conserved C-terminal domain A6A12_0535 PF13737 Transposase DDE domain A6A12_0555 PF04002 RadC-like JAB domain A6A12_0558 PF14338 Mrr N-terminal domain A6A12_0558 PF04471 Restriction endonuclease A6A12_0559 PF04851 Type III restriction enzyme, res subunit A6A12_0559 PF08463 EcoEI R protein C-terminal A6A12_0559 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) A6A12_0559 PF00271 Helicase conserved C-terminal domain A6A12_0560 PF01420 Type I restriction modification DNA specificity domain A6A12_0563 PF12161 HsdM N-terminal domain A6A12_0563 PF02384 N-6 DNA Methylase A6A12_0564 PF00589 Phage integrase family A6A12_0564 PF13356 Arm DNA-binding domain A6A12_0565 PF01668 SmpB protein A6A12_0566 PF03364 Polyketide cyclase / dehydrase and lipid transport A6A12_0567 PF03658 RnfH family Ubiquitin A6A12_0568 PF04355 SmpA / OmlA family A6A12_0569 PF02463 RecF/RecN/SMC N terminal domain A6A12_0570 PF01212 Beta-eliminating lyase A6A12_0571 PF01513 ATP-NAD kinase A6A12_0572 PF01025 GrpE A6A12_0573 PF00012 Hsp70 protein A6A12_0574 PF00012 Hsp70 protein A6A12_0575 PF01556 DnaJ C terminal domain A6A12_0575 PF00684 DnaJ central domain A6A12_0575 PF00226 DnaJ domain A6A12_0576 PF07963 Prokaryotic N-terminal methylation motif A6A12_0576 PF00114 Pilin (bacterial filament) A6A12_0581 PF03806 AbgT putative transporter family A6A12_0582 PF00756 Putative esterase A6A12_0583 PF08240 Alcohol dehydrogenase GroES-like domain A6A12_0583 PF00107 Zinc-binding dehydrogenase A6A12_0584 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6A12_0584 PF03466 LysR substrate binding domain A6A12_0585 PF14437 MafB19-like deaminase A6A12_0587 PF01464 Transglycosylase SLT domain A6A12_0587 PF00497 Bacterial extracellular solute-binding proteins, family 3 A6A12_0588 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal A6A12_0588 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain A6A12_0588 PF02769 AIR synthase related protein, C-terminal domain A6A12_0591 PF06786 Uncharacterised protein family (UPF0253) A6A12_0592 PF04391 Protein of unknown function (DUF533) A6A12_0593 PF04073 Aminoacyl-tRNA editing domain A6A12_0593 PF03129 Anticodon binding domain A6A12_0593 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A6A12_0594 PF01980 tRNA-methyltransferase O A6A12_0594 PF18389 TrmO C-terminal domain A6A12_0595 PF01197 Ribosomal protein L31 A6A12_0596 PF00444 Ribosomal protein L36 A6A12_0597 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 A6A12_0603 PF04287 tRNA pseudouridine synthase C A6A12_0604 PF00849 RNA pseudouridylate synthase A6A12_0605 PF02779 Transketolase, pyrimidine binding domain A6A12_0605 PF02780 Transketolase, C-terminal domain A6A12_0605 PF13292 1-deoxy-D-xylulose-5-phosphate synthase A6A12_0606 PF00348 Polyprenyl synthetase A6A12_0607 PF02609 Exonuclease VII small subunit A6A12_0609 PF01618 MotA/TolQ/ExbB proton channel family A6A12_0610 PF13677 Membrane MotB of proton-channel complex MotA/MotB A6A12_0610 PF00691 OmpA family A6A12_0612 PF02568 Thiamine biosynthesis protein (ThiI) A6A12_0612 PF02926 THUMP domain A6A12_0613 PF03466 LysR substrate binding domain A6A12_0613 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6A12_0614 PF04241 Protein of unknown function (DUF423) A6A12_0616 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain A6A12_0616 PF01367 5'-3' exonuclease, C-terminal SAM fold A6A12_0617 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases A6A12_0617 PF11892 Domain of unknown function (DUF3412) A6A12_0617 PF03641 Possible lysine decarboxylase A6A12_0618 PF00990 Diguanylate cyclase, GGDEF domain A6A12_0620 PF14489 QueF-like protein A6A12_0620 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term A6A12_0621 PF07348 Syd protein (SUKH-2) A6A12_0622 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) A6A12_0623 PF03180 NLPA lipoprotein A6A12_0624 PF00528 Binding-protein-dependent transport system inner membrane component A6A12_0625 PF09383 NIL domain A6A12_0625 PF00005 ABC transporter A6A12_0628 PF00356 Bacterial regulatory proteins, lacI family A6A12_0629 PF02378 Phosphotransferase system, EIIC A6A12_0629 PF00367 phosphotransferase system, EIIB A6A12_0630 PF16657 Maltogenic Amylase, C-terminal domain A6A12_0630 PF00128 Alpha amylase, catalytic domain A6A12_0631 PF00072 Response regulator receiver domain A6A12_0631 PF00486 Transcriptional regulatory protein, C terminal A6A12_0632 PF00512 His Kinase A (phospho-acceptor) domain A6A12_0632 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6A12_0632 PF00672 HAMP domain A6A12_0638 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A6A12_0639 PF00873 AcrB/AcrD/AcrF family A6A12_0640 PF01451 Low molecular weight phosphotyrosine protein phosphatase A6A12_0642 PF02350 UDP-N-acetylglucosamine 2-epimerase A6A12_0643 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain A6A12_0643 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain A6A12_0643 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain A6A12_0644 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain A6A12_0644 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain A6A12_0644 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain A6A12_0651 PF00132 Bacterial transferase hexapeptide (six repeats) A6A12_0653 PF03808 Glycosyl transferase WecB/TagA/CpsF family A6A12_0654 PF17945 Beta/Gamma crystallin A6A12_0654 PF12561 ToxR activated gene A lipoprotein domain A6A12_0659 PF13614 AAA domain A6A12_0660 PF18412 Outer-membrane lipoprotein Wza C-terminal domain A6A12_0660 PF10531 SLBB domain A6A12_0660 PF02563 Polysaccharide biosynthesis/export protein A6A12_0662 PF02397 Bacterial sugar transferase A6A12_0664 PF00464 Serine hydroxymethyltransferase A6A12_0667 PF03099 Biotin/lipoate A/B protein ligase family A6A12_0668 PF04359 Protein of unknown function (DUF493) A6A12_0669 PF00768 D-alanyl-D-alanine carboxypeptidase A6A12_0669 PF07943 Penicillin-binding protein 5, C-terminal domain A6A12_0670 PF05036 Sporulation related domain A6A12_0670 PF03330 Lytic transglycolase A6A12_0671 PF01098 Cell cycle protein A6A12_0672 PF00905 Penicillin binding protein transpeptidase domain A6A12_0672 PF03717 Penicillin-binding Protein dimerisation domain A6A12_0673 PF02590 Predicted SPOUT methyltransferase A6A12_0675 PF14840 Processivity clamp loader gamma complex DNA pol III C-term A6A12_0675 PF06144 DNA polymerase III, delta subunit A6A12_0676 PF04390 Lipopolysaccharide-assembly A6A12_0677 PF00133 tRNA synthetases class I (I, L, M and V) A6A12_0677 PF13603 Leucyl-tRNA synthetase, Domain 2 A6A12_0677 PF08264 Anticodon-binding domain of tRNA A6A12_0678 PF07295 Zinc-ribbon containing domain A6A12_0679 PF00795 Carbon-nitrogen hydrolase A6A12_0680 PF00571 CBS domain A6A12_0680 PF03471 Transporter associated domain A6A12_0682 PF02562 PhoH-like protein A6A12_0683 PF00919 Uncharacterized protein family UPF0004 A6A12_0683 PF01938 TRAM domain A6A12_0683 PF04055 Radical SAM superfamily A6A12_0684 PF01494 FAD binding domain A6A12_0685 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 A6A12_0686 PF02896 PEP-utilising enzyme, TIM barrel domain A6A12_0686 PF00391 PEP-utilising enzyme, mobile domain A6A12_0686 PF05524 PEP-utilising enzyme, N-terminal A6A12_0687 PF00381 PTS HPr component phosphorylation site A6A12_0688 PF00291 Pyridoxal-phosphate dependent enzyme A6A12_0690 PF04354 ZipA, C-terminal FtsZ-binding domain A6A12_0692 PF13609 Gram-negative porin A6A12_0693 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) A6A12_0694 PF04986 Putative transposase A6A12_0694 PF14319 Transposase zinc-binding domain A6A12_0695 PF13411 MerR HTH family regulatory protein A6A12_0697 PF16200 C-terminal region of band_7 A6A12_0697 PF01145 SPFH domain / Band 7 family A6A12_0699 PF00085 Thioredoxin A6A12_0700 PF08338 Domain of unknown function (DUF1731) A6A12_0700 PF01370 NAD dependent epimerase/dehydratase family A6A12_0701 PF12850 Calcineurin-like phosphoesterase superfamily domain A6A12_0703 PF17323 Trans-membrane regulatory protein ToxS A6A12_0704 PF00486 Transcriptional regulatory protein, C terminal A6A12_0705 PF00183 Hsp90 protein A6A12_0705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6A12_0706 PF05191 Adenylate kinase, active site lid A6A12_0707 PF00762 Ferrochelatase A6A12_0708 PF00854 POT family A6A12_0709 PF02357 Transcription termination factor nusG A6A12_0710 PF00733 Asparagine synthase A6A12_0710 PF13537 Glutamine amidotransferase domain A6A12_0712 PF00999 Sodium/hydrogen exchanger family A6A12_0712 PF02254 TrkA-N domain A6A12_0713 PF01047 MarR family A6A12_0713 PF00480 ROK family A6A12_0714 PF01979 Amidohydrolase family A6A12_0716 PF02378 Phosphotransferase system, EIIC A6A12_0716 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 A6A12_0716 PF00367 phosphotransferase system, EIIB A6A12_0717 PF00749 tRNA synthetases class I (E and Q), catalytic domain A6A12_0717 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain A6A12_0720 PF17848 Acetyl-coA carboxylase zinc finger domain A6A12_0720 PF01039 Carboxyl transferase domain A6A12_0721 PF08245 Mur ligase middle domain A6A12_0721 PF02875 Mur ligase family, glutamate ligase domain A6A12_0722 PF05036 Sporulation related domain A6A12_0723 PF02674 Colicin V production protein A6A12_0724 PF00156 Phosphoribosyl transferase domain A6A12_0725 PF13726 Na+-H+ antiporter family A6A12_0725 PF03553 Na+/H+ antiporter family A6A12_0726 PF00929 Exonuclease A6A12_0728 PF18393 MotY N-terminal domain A6A12_0728 PF00691 OmpA family A6A12_0729 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A6A12_0730 PF10576 Iron-sulfur binding domain of endonuclease III A6A12_0730 PF00633 Helix-hairpin-helix motif A6A12_0730 PF00730 HhH-GPD superfamily base excision DNA repair protein A6A12_0733 PF03116 NQR2, RnfD, RnfE family A6A12_0734 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit A6A12_0734 PF12838 4Fe-4S dicluster domain A6A12_0734 PF13375 RnfC Barrel sandwich hybrid domain A6A12_0734 PF10531 SLBB domain A6A12_0735 PF04060 Putative Fe-S cluster A6A12_0736 PF02508 Rnf-Nqr subunit, membrane protein A6A12_0737 PF17837 4'-phosphopantetheinyl transferase N-terminal domain A6A12_0737 PF01648 4'-phosphopantetheinyl transferase superfamily A6A12_0738 PF07715 TonB-dependent Receptor Plug Domain A6A12_0740 PF11806 Domain of unknown function (DUF3327) A6A12_0740 PF00756 Putative esterase A6A12_0742 PF00501 AMP-binding enzyme A6A12_0742 PF13193 AMP-binding enzyme C-terminal domain A6A12_0742 PF00975 Thioesterase domain A6A12_0742 PF00550 Phosphopantetheine attachment site A6A12_0742 PF00668 Condensation domain A6A12_0743 PF14319 Transposase zinc-binding domain A6A12_0743 PF04986 Putative transposase A6A12_0744 PF00501 AMP-binding enzyme A6A12_0744 PF00550 Phosphopantetheine attachment site A6A12_0744 PF13193 AMP-binding enzyme C-terminal domain A6A12_0744 PF00668 Condensation domain A6A12_0746 PF05977 Transmembrane secretion effector A6A12_0747 PF00550 Phosphopantetheine attachment site A6A12_0747 PF00857 Isochorismatase family A6A12_0748 PF00501 AMP-binding enzyme A6A12_0748 PF13193 AMP-binding enzyme C-terminal domain A6A12_0749 PF00425 chorismate binding enzyme A6A12_0751 PF00793 DAHP synthetase I family A6A12_0753 PF02927 Cellulase N-terminal ig-like domain A6A12_0753 PF00759 Glycosyl hydrolase family 9 A6A12_0753 PF02018 Carbohydrate binding domain A6A12_0756 PF00271 Helicase conserved C-terminal domain A6A12_0756 PF04851 Type III restriction enzyme, res subunit A6A12_0756 PF02151 UvrB/uvrC motif A6A12_0756 PF12344 Ultra-violet resistance protein B A6A12_0756 PF17757 UvrB interaction domain A6A12_0757 PF02954 Bacterial regulatory protein, Fis family A6A12_0757 PF00072 Response regulator receiver domain A6A12_0757 PF00158 Sigma-54 interaction domain A6A12_0758 PF01627 Hpt domain A6A12_0759 PF01933 Uncharacterised protein family UPF0052 A6A12_0760 PF06463 Molybdenum Cofactor Synthesis C A6A12_0760 PF04055 Radical SAM superfamily A6A12_0761 PF00994 Probable molybdopterin binding domain A6A12_0762 PF01967 MoaC family A6A12_0763 PF02597 ThiS family A6A12_0764 PF02391 MoaE protein A6A12_0765 PF00990 Diguanylate cyclase, GGDEF domain A6A12_0765 PF07694 5TMR of 5TMR-LYT A6A12_0766 PF00571 CBS domain A6A12_0766 PF00392 Bacterial regulatory proteins, gntR family A6A12_0766 PF07085 DRTGG domain A6A12_0766 PF03061 Thioesterase superfamily A6A12_0767 PF00403 Heavy-metal-associated domain A6A12_0769 PF01048 Phosphorylase superfamily A6A12_0771 PF09334 tRNA synthetases class I (M) A6A12_0771 PF01588 Putative tRNA binding domain A6A12_0772 PF10609 NUBPL iron-transfer P-loop NTPase A6A12_0773 PF00485 Phosphoribulokinase / Uridine kinase family A6A12_0774 PF05170 AsmA family A6A12_0775 PF12557 Cob(I)alamin adenosyltransferase N terminal A6A12_0775 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP A6A12_0776 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) A6A12_0777 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) A6A12_0779 PF04542 Sigma-70 region 2 A6A12_0779 PF08281 Sigma-70, region 4 A6A12_0780 PF00108 Thiolase, N-terminal domain A6A12_0780 PF02803 Thiolase, C-terminal domain A6A12_0781 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain A6A12_0781 PF00378 Enoyl-CoA hydratase/isomerase A6A12_0781 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain A6A12_0782 PF00881 Nitroreductase family A6A12_0783 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6A12_0783 PF03466 LysR substrate binding domain A6A12_0784 PF00072 Response regulator receiver domain A6A12_0786 PF00156 Phosphoribosyl transferase domain A6A12_0787 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding A6A12_0787 PF12169 DNA polymerase III subunits gamma and tau domain III A6A12_0787 PF12170 DNA polymerase III tau subunit V interacting with alpha A6A12_0788 PF02575 YbaB/EbfC DNA-binding family A6A12_0790 PF03692 Putative zinc- or iron-chelating domain A6A12_0794 PF13847 Methyltransferase domain A6A12_0795 PF01263 Aldose 1-epimerase A6A12_0796 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A6A12_0796 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain A6A12_0797 PF01641 SelR domain A6A12_0799 PF07023 Protein of unknown function (DUF1315) A6A12_0800 PF17763 Glutaminase/Asparaginase C-terminal domain A6A12_0800 PF00710 Asparaginase, N-terminal A6A12_0801 PF01343 Peptidase family S49 A6A12_0802 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6A12_0802 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A6A12_0803 PF00551 Formyl transferase A6A12_0803 PF01842 ACT domain A6A12_0805 PF13307 Helicase C-terminal domain A6A12_0805 PF04851 Type III restriction enzyme, res subunit A6A12_0806 PF00814 Glycoprotease family A6A12_0809 PF00561 alpha/beta hydrolase fold A6A12_0810 PF00501 AMP-binding enzyme A6A12_0810 PF13193 AMP-binding enzyme C-terminal domain A6A12_0811 PF00570 HRDC domain A6A12_0811 PF01612 3'-5' exonuclease A6A12_0812 PF03776 Septum formation topological specificity factor MinE A6A12_0813 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain A6A12_0814 PF03775 Septum formation inhibitor MinC, C-terminal domain A6A12_0814 PF05209 Septum formation inhibitor MinC, N-terminal domain A6A12_0815 PF05166 YcgL domain A6A12_0816 PF13406 Transglycosylase SLT domain A6A12_0817 PF03466 LysR substrate binding domain A6A12_0817 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6A12_0818 PF07662 Na+ dependent nucleoside transporter C-terminus A6A12_0818 PF07670 Nucleoside recognition A6A12_0818 PF01773 Na+ dependent nucleoside transporter N-terminus A6A12_0819 PF06483 Chitinase C A6A12_0819 PF00704 Glycosyl hydrolases family 18 A6A12_0820 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain A6A12_0820 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain A6A12_0823 PF01551 Peptidase family M23 A6A12_0824 PF09905 DNA-binding protein VF530 A6A12_0826 PF02310 B12 binding domain A6A12_0826 PF02607 B12 binding domain A6A12_0826 PF00809 Pterin binding enzyme A6A12_0826 PF02574 Homocysteine S-methyltransferase A6A12_0826 PF02965 Vitamin B12 dependent methionine synthase, activation domain A6A12_0827 PF02028 BCCT, betaine/carnitine/choline family transporter A6A12_0828 PF16657 Maltogenic Amylase, C-terminal domain A6A12_0828 PF00128 Alpha amylase, catalytic domain A6A12_0828 PF02903 Alpha amylase, N-terminal ig-like domain A6A12_0829 PF00270 DEAD/DEAH box helicase A6A12_0829 PF00271 Helicase conserved C-terminal domain A6A12_0831 PF03313 Serine dehydratase alpha chain A6A12_0831 PF03315 Serine dehydratase beta chain A6A12_0832 PF02696 Uncharacterized ACR, YdiU/UPF0061 family A6A12_0833 PF00072 Response regulator receiver domain A6A12_0833 PF00486 Transcriptional regulatory protein, C terminal A6A12_0834 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6A12_0834 PF00512 His Kinase A (phospho-acceptor) domain A6A12_0834 PF00672 HAMP domain A6A12_0835 PF01547 Bacterial extracellular solute-binding protein A6A12_0836 PF03480 Bacterial extracellular solute-binding protein, family 7 A6A12_0837 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component A6A12_0838 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component A6A12_0839 PF00072 Response regulator receiver domain A6A12_0839 PF02954 Bacterial regulatory protein, Fis family A6A12_0839 PF00158 Sigma-54 interaction domain A6A12_0840 PF00512 His Kinase A (phospho-acceptor) domain A6A12_0840 PF02743 Cache domain A6A12_0840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6A12_0842 PF05698 Bacterial trigger factor protein (TF) C-terminus A6A12_0842 PF05697 Bacterial trigger factor protein (TF) A6A12_0842 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A6A12_0843 PF00574 Clp protease A6A12_0844 PF06689 ClpX C4-type zinc finger A6A12_0844 PF07724 AAA domain (Cdc48 subfamily) A6A12_0844 PF10431 C-terminal, D2-small domain, of ClpB protein A6A12_0845 PF00004 ATPase family associated with various cellular activities (AAA) A6A12_0845 PF05362 Lon protease (S16) C-terminal proteolytic domain A6A12_0845 PF02190 ATP-dependent protease La (LON) substrate-binding domain A6A12_0846 PF00216 Bacterial DNA-binding protein A6A12_0847 PF13145 PPIC-type PPIASE domain A6A12_0849 PF02224 Cytidylate kinase A6A12_0850 PF00575 S1 RNA binding domain A6A12_0852 PF06305 Lipopolysaccharide assembly protein A domain A6A12_0853 PF18073 Rubredoxin metal binding domain A6A12_0854 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family A6A12_0856 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6A12_0856 PF03466 LysR substrate binding domain A6A12_0858 PF05222 Alanine dehydrogenase/PNT, N-terminal domain A6A12_0858 PF01262 Alanine dehydrogenase/PNT, C-terminal domain A6A12_0859 PF01037 Lrp/AsnC ligand binding domain A6A12_0860 PF01580 FtsK/SpoIIIE family A6A12_0860 PF13491 4TM region of DNA translocase FtsK/SpoIIIE A6A12_0860 PF17854 FtsK alpha domain A6A12_0860 PF09397 Ftsk gamma domain A6A12_0862 PF01435 Peptidase family M48 A6A12_0864 PF00106 short chain dehydrogenase A6A12_0869 PF16036 Chalcone isomerase-like A6A12_0871 PF08497 Radical SAM N-terminal A6A12_0871 PF04055 Radical SAM superfamily A6A12_0871 PF11842 Domain of unknown function (DUF3362) A6A12_0872 PF00089 Trypsin A6A12_0873 PF00990 Diguanylate cyclase, GGDEF domain A6A12_0873 PF00989 PAS fold A6A12_0873 PF01590 GAF domain A6A12_0873 PF00563 EAL domain A6A12_0876 PF03466 LysR substrate binding domain A6A12_0876 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6A12_0877 PF01717 Cobalamin-independent synthase, Catalytic domain A6A12_0877 PF08267 Cobalamin-independent synthase, N-terminal domain A6A12_0879 PF03795 YCII-related domain A6A12_0880 PF03061 Thioesterase superfamily A6A12_0881 PF04279 Intracellular septation protein A A6A12_0884 PF00375 Sodium:dicarboxylate symporter family A6A12_0887 PF00291 Pyridoxal-phosphate dependent enzyme A6A12_0888 PF00218 Indole-3-glycerol phosphate synthase A6A12_0888 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase A6A12_0889 PF00591 Glycosyl transferase family, a/b domain A6A12_0889 PF02885 Glycosyl transferase family, helical bundle domain A6A12_0890 PF00117 Glutamine amidotransferase class-I A6A12_0891 PF04715 Anthranilate synthase component I, N terminal region A6A12_0891 PF00425 chorismate binding enzyme A6A12_0892 PF08056 Tryptophan operon leader peptide A6A12_0893 PF02811 PHP domain A6A12_0894 PF01300 Telomere recombination A6A12_0895 PF01479 S4 domain A6A12_0895 PF00849 RNA pseudouridylate synthase A6A12_0896 PF00563 EAL domain A6A12_0896 PF00990 Diguanylate cyclase, GGDEF domain A6A12_0896 PF03707 Bacterial signalling protein N terminal repeat A6A12_0898 PF04542 Sigma-70 region 2 A6A12_0898 PF08281 Sigma-70, region 4 A6A12_0901 PF00664 ABC transporter transmembrane region A6A12_0901 PF00005 ABC transporter A6A12_0902 PF00664 ABC transporter transmembrane region A6A12_0902 PF00005 ABC transporter A6A12_0903 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6A12_0904 PF00072 Response regulator receiver domain A6A12_0904 PF00990 Diguanylate cyclase, GGDEF domain A6A12_0906 PF00266 Aminotransferase class-V A6A12_0907 PF02698 DUF218 domain A6A12_0909 PF03949 Malic enzyme, NAD binding domain A6A12_0909 PF00390 Malic enzyme, N-terminal domain A6A12_0912 PF01259 SAICAR synthetase A6A12_0914 PF02080 TrkA-C domain A6A12_0914 PF06826 Predicted Permease Membrane Region A6A12_0915 PF00462 Glutaredoxin A6A12_0916 PF00465 Iron-containing alcohol dehydrogenase A6A12_0917 PF01418 Helix-turn-helix domain, rpiR family A6A12_0917 PF01380 SIS domain A6A12_0918 PF00282 Pyridoxal-dependent decarboxylase conserved domain A6A12_0920 PF03956 Lysine exporter LysO A6A12_0922 PF04993 TfoX N-terminal domain A6A12_0922 PF04994 TfoX C-terminal domain A6A12_0926 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6A12_0926 PF00512 His Kinase A (phospho-acceptor) domain A6A12_0926 PF00497 Bacterial extracellular solute-binding proteins, family 3 A6A12_0928 PF00266 Aminotransferase class-V A6A12_0929 PF08328 Adenylosuccinate lyase C-terminal A6A12_0929 PF00206 Lyase A6A12_0930 PF04356 Protein of unknown function (DUF489) A6A12_0933 PF00294 pfkB family carbohydrate kinase A6A12_0934 PF00816 H-NS histone family A6A12_0935 PF03553 Na+/H+ antiporter family A6A12_0937 PF01634 ATP phosphoribosyltransferase A6A12_0937 PF08029 HisG, C-terminal domain A6A12_0938 PF00815 Histidinol dehydrogenase A6A12_0939 PF00155 Aminotransferase class I and II A6A12_0940 PF08645 Polynucleotide kinase 3 phosphatase A6A12_0940 PF00475 Imidazoleglycerol-phosphate dehydratase A6A12_0941 PF00117 Glutamine amidotransferase class-I A6A12_0942 PF00977 Histidine biosynthesis protein A6A12_0943 PF00977 Histidine biosynthesis protein A6A12_0944 PF01502 Phosphoribosyl-AMP cyclohydrolase A6A12_0944 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase A6A12_0945 PF00849 RNA pseudouridylate synthase A6A12_0946 PF03971 Monomeric isocitrate dehydrogenase A6A12_0947 PF00313 'Cold-shock' DNA-binding domain A6A12_0950 PF02617 ATP-dependent Clp protease adaptor protein ClpS A6A12_0951 PF10431 C-terminal, D2-small domain, of ClpB protein A6A12_0951 PF00004 ATPase family associated with various cellular activities (AAA) A6A12_0951 PF07724 AAA domain (Cdc48 subfamily) A6A12_0951 PF02861 Clp amino terminal domain, pathogenicity island component A6A12_0951 PF17871 AAA lid domain A6A12_0952 PF01176 Translation initiation factor 1A / IF-1 A6A12_0953 PF04377 Arginine-tRNA-protein transferase, C terminus A6A12_0953 PF04376 Arginine-tRNA-protein transferase, N terminus A6A12_0954 PF03588 Leucyl/phenylalanyl-tRNA protein transferase A6A12_0955 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) A6A12_0956 PF10692 Protein of unknown function (DUF2498) A6A12_0959 PF01131 DNA topoisomerase A6A12_0959 PF01751 Toprim domain A6A12_0959 PF01396 Topoisomerase DNA binding C4 zinc finger A6A12_0959 PF08272 Topoisomerase I zinc-ribbon-like A6A12_0960 PF00483 Nucleotidyl transferase A6A12_0961 PF08323 Starch synthase catalytic domain A6A12_0961 PF00534 Glycosyl transferases group 1 A6A12_0965 PF04993 TfoX N-terminal domain A6A12_0965 PF04994 TfoX C-terminal domain A6A12_0966 PF00356 Bacterial regulatory proteins, lacI family A6A12_0967 PF02613 Nitrate reductase delta subunit A6A12_0968 PF00072 Response regulator receiver domain A6A12_0968 PF00486 Transcriptional regulatory protein, C terminal A6A12_0969 PF02698 DUF218 domain A6A12_0971 PF03882 MukF winged-helix domain A6A12_0971 PF17193 MukF C-terminal domain A6A12_0971 PF17192 MukF middle domain A6A12_0972 PF04288 MukE-like family A6A12_0973 PF04310 MukB N-terminal A6A12_0973 PF16330 MukB hinge domain A6A12_0976 PF18030 RimK PreATP-grasp domain A6A12_0976 PF08443 RimK-like ATP-grasp domain A6A12_0979 PF05925 Enterobacterial virulence protein IpgD A6A12_0980 PF01904 Protein of unknown function DUF72 A6A12_0981 PF01336 OB-fold nucleic acid binding domain A6A12_0981 PF00152 tRNA synthetases class II (D, K and N) A6A12_0981 PF02938 GAD domain A6A12_0982 PF00265 Thymidine kinase A6A12_0983 PF02698 DUF218 domain A6A12_0985 PF03466 LysR substrate binding domain A6A12_0985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6A12_0988 PF01226 Formate/nitrite transporter A6A12_0989 PF06796 Periplasmic nitrate reductase protein NapE A6A12_0990 PF03264 NapC/NirT cytochrome c family, N-terminal region A6A12_0991 PF18364 Molybdopterin oxidoreductase N-terminal domain A6A12_0991 PF01568 Molydopterin dinucleotide binding domain A6A12_0991 PF00384 Molybdopterin oxidoreductase A6A12_0993 PF02833 DHHA2 domain A6A12_0993 PF01368 DHH family A6A12_0996 PF00005 ABC transporter A6A12_0997 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A6A12_0997 PF00005 ABC transporter A6A12_0998 PF00528 Binding-protein-dependent transport system inner membrane component A6A12_0998 PF12911 N-terminal TM domain of oligopeptide transport permease C A6A12_0999 PF00528 Binding-protein-dependent transport system inner membrane component A6A12_1000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A6A12_1001 PF02954 Bacterial regulatory protein, Fis family A6A12_1001 PF00158 Sigma-54 interaction domain A6A12_1002 PF04012 PspA/IM30 family A6A12_1003 PF06667 Phage shock protein B A6A12_1005 PF13302 Acetyltransferase (GNAT) domain A6A12_1005 PF13673 Acetyltransferase (GNAT) domain A6A12_1005 PF03352 Methyladenine glycosylase A6A12_1005 PF00117 Glutamine amidotransferase class-I A6A12_1005 PF00958 GMP synthase C terminal domain A6A12_1006 PF01053 Cys/Met metabolism PLP-dependent enzyme A6A12_1007 PF13091 PLD-like domain A6A12_1007 PF13396 Phospholipase_D-nuclease N-terminal A6A12_1008 PF00209 Sodium:neurotransmitter symporter family A6A12_1009 PF00849 RNA pseudouridylate synthase A6A12_1011 PF00563 EAL domain A6A12_1011 PF00196 Bacterial regulatory proteins, luxR family A6A12_1013 PF01066 CDP-alcohol phosphatidyltransferase A6A12_1014 PF00005 ABC transporter A6A12_1015 PF00528 Binding-protein-dependent transport system inner membrane component A6A12_1016 PF13416 Bacterial extracellular solute-binding protein A6A12_1018 PF06945 Protein of unknown function (DUF1289) A6A12_1020 PF00149 Calcineurin-like phosphoesterase A6A12_1020 PF02872 5'-nucleotidase, C-terminal domain A6A12_1021 PF13737 Transposase DDE domain A6A12_1024 PF00271 Helicase conserved C-terminal domain A6A12_1024 PF00270 DEAD/DEAH box helicase A6A12_1028 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6A12_1028 PF00672 HAMP domain A6A12_1028 PF00512 His Kinase A (phospho-acceptor) domain A6A12_1029 PF00486 Transcriptional regulatory protein, C terminal A6A12_1029 PF00072 Response regulator receiver domain A6A12_1031 PF04851 Type III restriction enzyme, res subunit A6A12_1031 PF00271 Helicase conserved C-terminal domain A6A12_1032 PF01479 S4 domain A6A12_1032 PF00849 RNA pseudouridylate synthase A6A12_1033 PF07690 Major Facilitator Superfamily A6A12_1035 PF11066 Protein of unknown function (DUF2867) A6A12_1035 PF13460 NAD(P)H-binding A6A12_1036 PF01554 MatE A6A12_1037 PF00005 ABC transporter A6A12_1040 PF06965 Na+/H+ antiporter 1 A6A12_1041 PF00202 Aminotransferase class-III A6A12_1042 PF03435 Saccharopine dehydrogenase NADP binding domain A6A12_1042 PF16653 Saccharopine dehydrogenase C-terminal domain A6A12_1044 PF00672 HAMP domain A6A12_1044 PF17200 Single Cache domain 2 A6A12_1044 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6A12_1049 PF00994 Probable molybdopterin binding domain A6A12_1051 PF00175 Oxidoreductase NAD-binding domain A6A12_1051 PF00970 Oxidoreductase FAD-binding domain A6A12_1051 PF00111 2Fe-2S iron-sulfur cluster binding domain A6A12_1052 PF00268 Ribonucleotide reductase, small chain A6A12_1053 PF02867 Ribonucleotide reductase, barrel domain A6A12_1053 PF00317 Ribonucleotide reductase, all-alpha domain A6A12_1053 PF03477 ATP cone domain A6A12_1056 PF03989 DNA gyrase C-terminal domain, beta-propeller A6A12_1056 PF00521 DNA gyrase/topoisomerase IV, subunit A A6A12_1057 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6A12_1057 PF00672 HAMP domain A6A12_1057 PF12729 Four helix bundle sensory module for signal transduction A6A12_1060 PF01970 Tripartite tricarboxylate transporter TctA family A6A12_1061 PF08218 Citrate lyase ligase C-terminal domain A6A12_1061 PF00583 Acetyltransferase (GNAT) family A6A12_1062 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase A6A12_1065 PF00682 HMGL-like A6A12_1065 PF02436 Conserved carboxylase domain A6A12_1065 PF00364 Biotin-requiring enzyme A6A12_1066 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit A6A12_1067 PF17203 Single cache domain 3 A6A12_1067 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6A12_1068 PF00072 Response regulator receiver domain A6A12_1068 PF12431 Transcriptional regulator A6A12_1069 PF06857 Malonate decarboxylase delta subunit (MdcD) A6A12_1070 PF03328 HpcH/HpaI aldolase/citrate lyase family A6A12_1071 PF04223 Citrate lyase, alpha subunit (CitF) A6A12_1072 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase A6A12_1073 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase A6A12_1077 PF01238 Phosphomannose isomerase type I A6A12_1078 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A6A12_1078 PF02378 Phosphotransferase system, EIIC A6A12_1078 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A6A12_1079 PF12833 Helix-turn-helix domain A6A12_1081 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A6A12_1083 PF02001 Protein of unknown function DUF134 A6A12_1086 PF13407 Periplasmic binding protein domain A6A12_1087 PF00005 ABC transporter A6A12_1088 PF02653 Branched-chain amino acid transport system / permease component A6A12_1089 PF03466 LysR substrate binding domain A6A12_1089 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6A12_1090 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A6A12_1091 PF01219 Prokaryotic diacylglycerol kinase A6A12_1092 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6A12_1092 PF00672 HAMP domain A6A12_1092 PF00512 His Kinase A (phospho-acceptor) domain A6A12_1093 PF00486 Transcriptional regulatory protein, C terminal A6A12_1093 PF00072 Response regulator receiver domain A6A12_1094 PF01970 Tripartite tricarboxylate transporter TctA family A6A12_1100 PF00285 Citrate synthase, C-terminal domain A6A12_1101 PF00330 Aconitase family (aconitate hydratase) A6A12_1101 PF00694 Aconitase C-terminal domain A6A12_1102 PF04303 PrpF protein A6A12_1103 PF00501 AMP-binding enzyme A6A12_1103 PF16177 Acetyl-coenzyme A synthetase N-terminus A6A12_1103 PF13193 AMP-binding enzyme C-terminal domain A6A12_1108 PF04055 Radical SAM superfamily A6A12_1109 PF06508 Queuosine biosynthesis protein QueC A6A12_1114 PF10672 S-adenosylmethionine-dependent methyltransferase A6A12_1114 PF17785 PUA-like domain A6A12_1115 PF04986 Putative transposase A6A12_1115 PF14319 Transposase zinc-binding domain A6A12_1116 PF17785 PUA-like domain A6A12_1116 PF10672 S-adenosylmethionine-dependent methyltransferase A6A12_1117 PF00708 Acylphosphatase A6A12_1118 PF04358 DsrC like protein A6A12_1119 PF01027 Inhibitor of apoptosis-promoting Bax1 A6A12_1120 PF00005 ABC transporter A6A12_1121 PF00528 Binding-protein-dependent transport system inner membrane component A6A12_1122 PF00528 Binding-protein-dependent transport system inner membrane component A6A12_1123 PF00497 Bacterial extracellular solute-binding proteins, family 3 A6A12_1124 PF14824 Sirohaem biosynthesis protein central A6A12_1124 PF10414 Sirohaem synthase dimerisation region A6A12_1124 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A6A12_1126 PF00990 Diguanylate cyclase, GGDEF domain A6A12_1126 PF00072 Response regulator receiver domain A6A12_1127 PF04461 Protein of unknown function (DUF520) A6A12_1128 PF00793 DAHP synthetase I family A6A12_1130 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain A6A12_1130 PF02896 PEP-utilising enzyme, TIM barrel domain A6A12_1130 PF00391 PEP-utilising enzyme, mobile domain A6A12_1133 PF17783 CvfB-like winged helix domain A6A12_1133 PF13509 S1 domain A6A12_1134 PF01189 16S rRNA methyltransferase RsmB/F A6A12_1134 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF A6A12_1134 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF A6A12_1135 PF02470 MlaD protein A6A12_1136 PF04403 Paraquat-inducible protein A A6A12_1137 PF00664 ABC transporter transmembrane region A6A12_1137 PF00005 ABC transporter A6A12_1138 PF13185 GAF domain A6A12_1140 PF17804 Tail specific protease N-terminal domain A6A12_1140 PF03572 Peptidase family S41 A6A12_1140 PF00595 PDZ domain A6A12_1140 PF11818 C-terminal domain of tail specific protease (DUF3340) A6A12_1142 PF11940 Domain of unknown function (DUF3458) Ig-like fold A6A12_1142 PF17432 Domain of unknown function (DUF3458_C) ARM repeats A6A12_1142 PF01433 Peptidase family M1 domain A6A12_1143 PF05088 Bacterial NAD-glutamate dehydrogenase A6A12_1144 PF01180 Dihydroorotate dehydrogenase A6A12_1145 PF07126 Cell-division protein ZapC A6A12_1146 PF10672 S-adenosylmethionine-dependent methyltransferase A6A12_1146 PF02926 THUMP domain A6A12_1146 PF01170 Putative RNA methylase family UPF0020 A6A12_1150 PF04957 Ribosome modulation factor A6A12_1151 PF07977 FabA-like domain A6A12_1152 PF05362 Lon protease (S16) C-terminal proteolytic domain A6A12_1152 PF13654 AAA domain A6A12_1153 PF06303 MatP N-terminal domain A6A12_1153 PF17414 MatP C-terminal ribbon-helix-helix domain A6A12_1157 PF00115 Cytochrome C and Quinol oxidase polypeptide I A6A12_1160 PF13442 Cytochrome C oxidase, cbb3-type, subunit III A6A12_1160 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP A6A12_1162 PF00403 Heavy-metal-associated domain A6A12_1165 PF00027 Cyclic nucleotide-binding domain A6A12_1165 PF13545 Crp-like helix-turn-helix domain A6A12_1166 PF00582 Universal stress protein family A6A12_1167 PF01171 PP-loop family A6A12_1171 PF08402 TOBE domain A6A12_1171 PF00005 ABC transporter A6A12_1172 PF00528 Binding-protein-dependent transport system inner membrane component A6A12_1173 PF00528 Binding-protein-dependent transport system inner membrane component A6A12_1174 PF13416 Bacterial extracellular solute-binding protein A6A12_1175 PF13416 Bacterial extracellular solute-binding protein A6A12_1176 PF02146 Sir2 family A6A12_1177 PF00909 Ammonium Transporter Family A6A12_1178 PF12848 ABC transporter A6A12_1178 PF00005 ABC transporter A6A12_1179 PF00072 Response regulator receiver domain A6A12_1179 PF00196 Bacterial regulatory proteins, luxR family A6A12_1180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6A12_1180 PF07730 Histidine kinase A6A12_1180 PF05231 MASE1 A6A12_1181 PF07690 Major Facilitator Superfamily A6A12_1183 PF00528 Binding-protein-dependent transport system inner membrane component A6A12_1184 PF00005 ABC transporter A6A12_1184 PF08402 TOBE domain A6A12_1186 PF12804 MobA-like NTP transferase domain A6A12_1187 PF03205 Molybdopterin guanine dinucleotide synthesis protein B A6A12_1189 PF00480 ROK family A6A12_1193 PF12729 Four helix bundle sensory module for signal transduction A6A12_1193 PF00672 HAMP domain A6A12_1193 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6A12_1194 PF00877 NlpC/P60 family A6A12_1198 PF01554 MatE A6A12_1199 PF01068 ATP dependent DNA ligase domain A6A12_1199 PF14743 DNA ligase OB-like domain A6A12_1200 PF01734 Patatin-like phospholipase A6A12_1203 PF02472 Biopolymer transport protein ExbD/TolR A6A12_1204 PF01618 MotA/TolQ/ExbB proton channel family A6A12_1205 PF01618 MotA/TolQ/ExbB proton channel family A6A12_1210 PF04389 Peptidase family M28 A6A12_1210 PF04151 Bacterial pre-peptidase C-terminal domain A6A12_1211 PF02798 Glutathione S-transferase, N-terminal domain A6A12_1211 PF14497 Glutathione S-transferase, C-terminal domain A6A12_1213 PF04209 homogentisate 1,2-dioxygenase A6A12_1214 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A6A12_1215 PF01546 Peptidase family M20/M25/M40 A6A12_1215 PF07687 Peptidase dimerisation domain A6A12_1218 PF01235 Sodium:alanine symporter family A6A12_1219 PF01810 LysE type translocator A6A12_1220 PF02074 Carboxypeptidase Taq (M32) metallopeptidase A6A12_1222 PF03050 Transposase IS66 family A6A12_1222 PF13007 Transposase C of IS166 homeodomain A6A12_1222 PF13817 IS66 C-terminal element A6A12_1222 PF13005 zinc-finger binding domain of transposase IS66 A6A12_1226 PF00271 Helicase conserved C-terminal domain A6A12_1228 PF13737 Transposase DDE domain A6A12_1229 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) A6A12_1233 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A6A12_1233 PF02894 Oxidoreductase family, C-terminal alpha/beta domain A6A12_1237 PF00171 Aldehyde dehydrogenase family A6A12_1239 PF01261 Xylose isomerase-like TIM barrel A6A12_1240 PF00294 pfkB family carbohydrate kinase A6A12_1241 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A6A12_1241 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A6A12_1241 PF00205 Thiamine pyrophosphate enzyme, central domain A6A12_1242 PF04962 KduI/IolB family A6A12_1245 PF01380 SIS domain A6A12_1245 PF00571 CBS domain A6A12_1246 PF00474 Sodium:solute symporter family A6A12_1247 PF02894 Oxidoreductase family, C-terminal alpha/beta domain A6A12_1247 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A6A12_1252 PF07690 Major Facilitator Superfamily A6A12_1253 PF03466 LysR substrate binding domain A6A12_1253 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6A12_1255 PF04408 Helicase associated domain (HA2) A6A12_1255 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold A6A12_1255 PF00271 Helicase conserved C-terminal domain A6A12_1255 PF11898 Domain of unknown function (DUF3418) A6A12_1255 PF00270 DEAD/DEAH box helicase A6A12_1259 PF00563 EAL domain A6A12_1259 PF00990 Diguanylate cyclase, GGDEF domain A6A12_1259 PF08448 PAS fold A6A12_1261 PF00012 Hsp70 protein A6A12_1262 PF00012 Hsp70 protein A6A12_1263 PF00465 Iron-containing alcohol dehydrogenase A6A12_1269 PF00356 Bacterial regulatory proteins, lacI family A6A12_1270 PF00232 Glycosyl hydrolase family 1 A6A12_1271 PF00271 Helicase conserved C-terminal domain A6A12_1271 PF00270 DEAD/DEAH box helicase A6A12_1272 PF00384 Molybdopterin oxidoreductase A6A12_1272 PF01568 Molydopterin dinucleotide binding domain A6A12_1272 PF18364 Molybdopterin oxidoreductase N-terminal domain A6A12_1273 PF03264 NapC/NirT cytochrome c family, N-terminal region A6A12_1274 PF00313 'Cold-shock' DNA-binding domain A6A12_1277 PF00158 Sigma-54 interaction domain A6A12_1277 PF02954 Bacterial regulatory protein, Fis family A6A12_1277 PF00072 Response regulator receiver domain A6A12_1278 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6A12_1278 PF00512 His Kinase A (phospho-acceptor) domain A6A12_1278 PF00497 Bacterial extracellular solute-binding proteins, family 3 A6A12_1279 PF00939 Sodium:sulfate symporter transmembrane region A6A12_1281 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6A12_1281 PF00672 HAMP domain A6A12_1282 PF01168 Alanine racemase, N-terminal domain A6A12_1282 PF00842 Alanine racemase, C-terminal domain A6A12_1283 PF00892 EamA-like transporter family A6A12_1284 PF00990 Diguanylate cyclase, GGDEF domain A6A12_1286 PF13302 Acetyltransferase (GNAT) domain A6A12_1287 PF18024 Helix-turn-helix domain A6A12_1287 PF00158 Sigma-54 interaction domain A6A12_1288 PF05128 Domain of unknown function (DUF697) A6A12_1289 PF04317 YcjX-like family, DUF463 A6A12_1292 PF00425 chorismate binding enzyme A6A12_1292 PF04715 Anthranilate synthase component I, N terminal region A6A12_1293 PF00293 NUDIX domain A6A12_1294 PF03222 Tryptophan/tyrosine permease family A6A12_1295 PF03313 Serine dehydratase alpha chain A6A12_1295 PF03315 Serine dehydratase beta chain A6A12_1296 PF00041 Fibronectin type III domain A6A12_1296 PF12561 ToxR activated gene A lipoprotein domain A6A12_1298 PF04231 Endonuclease I A6A12_1299 PF01242 6-pyruvoyl tetrahydropterin synthase A6A12_1300 PF00672 HAMP domain A6A12_1300 PF17200 Single Cache domain 2 A6A12_1300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6A12_1301 PF01336 OB-fold nucleic acid binding domain A6A12_1301 PF00152 tRNA synthetases class II (D, K and N) A6A12_1303 PF01339 CheB methylesterase A6A12_1303 PF00072 Response regulator receiver domain A6A12_1304 PF03975 CheD chemotactic sensory transduction A6A12_1305 PF03705 CheR methyltransferase, all-alpha domain A6A12_1305 PF01739 CheR methyltransferase, SAM binding domain A6A12_1306 PF01584 CheW-like domain A6A12_1307 PF00672 HAMP domain A6A12_1307 PF12729 Four helix bundle sensory module for signal transduction A6A12_1307 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6A12_1308 PF09078 CheY binding A6A12_1308 PF02895 Signal transducing histidine kinase, homodimeric domain A6A12_1308 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6A12_1308 PF01584 CheW-like domain A6A12_1308 PF01627 Hpt domain A6A12_1310 PF00072 Response regulator receiver domain A6A12_1311 PF00672 HAMP domain A6A12_1311 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6A12_1311 PF12729 Four helix bundle sensory module for signal transduction A6A12_1312 PF00672 HAMP domain A6A12_1312 PF01966 HD domain A6A12_1313 PF00155 Aminotransferase class I and II A6A12_1314 PF00571 CBS domain A6A12_1315 PF11490 DNA polymerase III polC-type N-terminus II A6A12_1315 PF02811 PHP domain A6A12_1315 PF00929 Exonuclease A6A12_1315 PF17657 Bacterial DNA polymerase III alpha subunit finger domain A6A12_1315 PF14579 Helix-hairpin-helix motif A6A12_1315 PF07733 Bacterial DNA polymerase III alpha NTPase domain A6A12_1315 PF14480 DNA polymerase III polC-type N-terminus I A6A12_1316 PF00672 HAMP domain A6A12_1316 PF02743 Cache domain A6A12_1316 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6A12_1317 PF02028 BCCT, betaine/carnitine/choline family transporter A6A12_1318 PF01047 MarR family A6A12_1321 PF00753 Metallo-beta-lactamase superfamily A6A12_1322 PF05951 Bacterial protein of unknown function (DUF882) A6A12_1323 PF03734 L,D-transpeptidase catalytic domain A6A12_1323 PF01471 Putative peptidoglycan binding domain A6A12_1328 PF00925 GTP cyclohydrolase II A6A12_1329 PF00480 ROK family A6A12_1330 PF00593 TonB dependent receptor A6A12_1330 PF04886 PT repeat A6A12_1330 PF07715 TonB-dependent Receptor Plug Domain A6A12_1331 PF01243 Pyridoxamine 5'-phosphate oxidase A6A12_1332 PF06228 Haem utilisation ChuX/HutX A6A12_1334 PF03544 Gram-negative bacterial TonB protein C-terminal A6A12_1335 PF01618 MotA/TolQ/ExbB proton channel family A6A12_1336 PF02472 Biopolymer transport protein ExbD/TolR A6A12_1338 PF01032 FecCD transport family A6A12_1339 PF00005 ABC transporter A6A12_1342 PF00672 HAMP domain A6A12_1342 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6A12_1343 PF08244 Glycosyl hydrolases family 32 C terminal A6A12_1343 PF00251 Glycosyl hydrolases family 32 N-terminal domain A6A12_1344 PF00356 Bacterial regulatory proteins, lacI family A6A12_1345 PF02378 Phosphotransferase system, EIIC A6A12_1345 PF00367 phosphotransferase system, EIIB A6A12_1346 PF00294 pfkB family carbohydrate kinase A6A12_1347 PF00563 EAL domain A6A12_1347 PF12792 CSS motif domain associated with EAL A6A12_1348 PF07885 Ion channel A6A12_1349 PF00672 HAMP domain A6A12_1349 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6A12_1349 PF12729 Four helix bundle sensory module for signal transduction A6A12_1355 PF05114 Protein of unknown function (DUF692) A6A12_1358 PF01654 Cytochrome bd terminal oxidase subunit I A6A12_1359 PF02322 Cytochrome bd terminal oxidase subunit II A6A12_1360 PF01042 Endoribonuclease L-PSP A6A12_1364 PF13817 IS66 C-terminal element A6A12_1364 PF13007 Transposase C of IS166 homeodomain A6A12_1364 PF03050 Transposase IS66 family A6A12_1364 PF13005 zinc-finger binding domain of transposase IS66 A6A12_1365 PF00665 Integrase core domain A6A12_1365 PF13333 Integrase core domain A6A12_1365 PF13276 HTH-like domain A6A12_1367 PF00486 Transcriptional regulatory protein, C terminal A6A12_1369 PF00665 Integrase core domain A6A12_1370 PF01527 Transposase A6A12_1372 PF08239 Bacterial SH3 domain A6A12_1372 PF00069 Protein kinase domain A6A12_1377 PF16697 Inner membrane component of T3SS, cytoplasmic domain A6A12_1381 PF07478 D-ala D-ala ligase C-terminus A6A12_1383 PF17871 AAA lid domain A6A12_1383 PF10431 C-terminal, D2-small domain, of ClpB protein A6A12_1383 PF00004 ATPase family associated with various cellular activities (AAA) A6A12_1383 PF07724 AAA domain (Cdc48 subfamily) A6A12_1393 PF04717 Type VI secretion system, phage-baseplate injector A6A12_1393 PF16671 Actin cross-linking domain A6A12_1398 PF02899 Phage integrase, N-terminal SAM-like domain A6A12_1398 PF00589 Phage integrase family A6A12_1403 PF00072 Response regulator receiver domain A6A12_1403 PF00990 Diguanylate cyclase, GGDEF domain A6A12_1405 PF11852 Domain of unknown function (DUF3372) A6A12_1405 PF17967 Pullulanase N2 domain A6A12_1405 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) A6A12_1405 PF03714 Bacterial pullanase-associated domain A6A12_1405 PF18494 Pullulanase Ins domain A6A12_1406 PF01584 CheW-like domain A6A12_1406 PF00072 Response regulator receiver domain A6A12_1408 PF00072 Response regulator receiver domain A6A12_1408 PF12431 Transcriptional regulator A6A12_1409 PF17203 Single cache domain 3 A6A12_1409 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain A6A12_1409 PF00989 PAS fold A6A12_1409 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6A12_1412 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A6A12_1416 PF04204 Homoserine O-succinyltransferase A6A12_1419 PF05971 RNA methyltransferase A6A12_1420 PF01863 Protein of unknown function DUF45 A6A12_1422 PF03466 LysR substrate binding domain A6A12_1422 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6A12_1427 PF01032 FecCD transport family A6A12_1428 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family A6A12_1430 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase A6A12_1431 PF02654 Cobalamin-5-phosphate synthase A6A12_1433 PF16671 Actin cross-linking domain A6A12_1433 PF12146 Serine aminopeptidase, S33 A6A12_1433 PF11713 Peptidase C80 family A6A12_1433 PF11647 Membrane Localization Domain A6A12_1433 PF07634 RtxA repeat A6A12_1434 PF02794 RTX toxin acyltransferase family A6A12_1436 PF03412 Peptidase C39 family A6A12_1436 PF00005 ABC transporter A6A12_1436 PF00664 ABC transporter transmembrane region A6A12_1438 PF00664 ABC transporter transmembrane region A6A12_1438 PF00005 ABC transporter A6A12_1438 PF03412 Peptidase C39 family A6A12_1439 PF02743 Cache domain A6A12_1439 PF00672 HAMP domain A6A12_1439 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6A12_1441 PF13460 NAD(P)H-binding A6A12_1443 PF08411 Exonuclease C-terminal A6A12_1443 PF00929 Exonuclease A6A12_1444 PF03788 LrgA family A6A12_1445 PF04172 LrgB-like family A6A12_1446 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region A6A12_1446 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region A6A12_1447 PF08448 PAS fold A6A12_1447 PF00563 EAL domain A6A12_1447 PF00990 Diguanylate cyclase, GGDEF domain A6A12_1447 PF08447 PAS fold A6A12_1448 PF02222 ATP-grasp domain A6A12_1449 PF13426 PAS domain A6A12_1449 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6A12_1449 PF08447 PAS fold A6A12_1450 PF05724 Thiopurine S-methyltransferase (TPMT) A6A12_1453 PF01588 Putative tRNA binding domain A6A12_1453 PF03147 Ferredoxin-fold anticodon binding domain A6A12_1453 PF03484 tRNA synthetase B5 domain A6A12_1453 PF03483 B3/4 domain A6A12_1453 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain A6A12_1454 PF01409 tRNA synthetases class II core domain (F) A6A12_1454 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain A6A12_1461 PF01066 CDP-alcohol phosphatidyltransferase A6A12_1462 PF01541 GIY-YIG catalytic domain A6A12_1462 PF02151 UvrB/uvrC motif A6A12_1462 PF08459 UvrC Helix-hairpin-helix N-terminal A6A12_1463 PF00196 Bacterial regulatory proteins, luxR family A6A12_1463 PF00072 Response regulator receiver domain A6A12_1464 PF00136 DNA polymerase family B A6A12_1464 PF03104 DNA polymerase family B, exonuclease domain A6A12_1466 PF09285 Elongation factor P, C-terminal A6A12_1466 PF01132 Elongation factor P (EF-P) OB domain A6A12_1466 PF08207 Elongation factor P (EF-P) KOW-like domain A6A12_1467 PF04269 Protein of unknown function, DUF440 A6A12_1469 PF00392 Bacterial regulatory proteins, gntR family A6A12_1469 PF07702 UTRA domain A6A12_1470 PF01979 Amidohydrolase family A6A12_1471 PF00491 Arginase family A6A12_1472 PF17392 Urocanase C-terminal domain A6A12_1472 PF17391 Urocanase N-terminal domain A6A12_1472 PF01175 Urocanase Rossmann-like domain A6A12_1473 PF00221 Aromatic amino acid lyase A6A12_1475 PF04191 Phospholipid methyltransferase A6A12_1476 PF13183 4Fe-4S dicluster domain A6A12_1476 PF02913 FAD linked oxidases, C-terminal domain A6A12_1476 PF01565 FAD binding domain A6A12_1482 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase A6A12_1482 PF07055 Enoyl reductase FAD binding domain A6A12_1482 PF12241 Trans-2-enoyl-CoA reductase catalytic region A6A12_1483 PF09317 Domain of unknown function (DUF1974) A6A12_1483 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A6A12_1483 PF02770 Acyl-CoA dehydrogenase, middle domain A6A12_1483 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A6A12_1484 PF16295 Tetracyclin repressor-like, C-terminal domain A6A12_1484 PF00440 Bacterial regulatory proteins, tetR family A6A12_1487 PF00171 Aldehyde dehydrogenase family A6A12_1488 PF00563 EAL domain A6A12_1488 PF03707 Bacterial signalling protein N terminal repeat A6A12_1488 PF13188 PAS domain A6A12_1488 PF00990 Diguanylate cyclase, GGDEF domain A6A12_1515 PF00574 Clp protease A6A12_1518 PF03354 Phage Terminase A6A12_1524 PF00959 Phage lysozyme A6A12_1530 PF06147 Protein of unknown function (DUF968) A6A12_1546 PF00717 Peptidase S24-like A6A12_1546 PF01381 Helix-turn-helix A6A12_1562 PF13737 Transposase DDE domain A6A12_1563 PF13737 Transposase DDE domain A6A12_1576 PF13356 Arm DNA-binding domain A6A12_1576 PF00589 Phage integrase family A6A12_1578 PF06610 L-alanine exporter A6A12_1579 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6A12_1579 PF00072 Response regulator receiver domain A6A12_1579 PF09308 LuxQ, periplasmic A6A12_1579 PF00512 His Kinase A (phospho-acceptor) domain A6A12_1583 PF13005 zinc-finger binding domain of transposase IS66 A6A12_1583 PF13007 Transposase C of IS166 homeodomain A6A12_1583 PF03050 Transposase IS66 family A6A12_1583 PF13817 IS66 C-terminal element A6A12_1584 PF02445 Quinolinate synthetase A protein A6A12_1585 PF16331 TolA binding protein trimerisation A6A12_1585 PF13525 Outer membrane lipoprotein A6A12_1586 PF00691 OmpA family A6A12_1589 PF02472 Biopolymer transport protein ExbD/TolR A6A12_1590 PF01618 MotA/TolQ/ExbB proton channel family A6A12_1591 PF03061 Thioesterase superfamily A6A12_1592 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) A6A12_1593 PF02322 Cytochrome bd terminal oxidase subunit II A6A12_1594 PF01654 Cytochrome bd terminal oxidase subunit I A6A12_1595 PF05496 Holliday junction DNA helicase RuvB P-loop domain A6A12_1595 PF05491 RuvB C-terminal winged helix domain A6A12_1595 PF17864 RuvB AAA lid domain A6A12_1596 PF01330 RuvA N terminal domain A6A12_1596 PF07499 RuvA, C-terminal domain A6A12_1597 PF02075 Crossover junction endodeoxyribonuclease RuvC A6A12_1598 PF01406 tRNA synthetases class I (C) catalytic domain A6A12_1598 PF09190 DALR domain A6A12_1599 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD A6A12_1600 PF00149 Calcineurin-like phosphoesterase A6A12_1601 PF08668 HDOD domain A6A12_1601 PF00563 EAL domain A6A12_1602 PF02810 SEC-C motif A6A12_1604 PF06733 DEAD_2 A6A12_1604 PF13307 Helicase C-terminal domain A6A12_1605 PF01925 Sulfite exporter TauE/SafE A6A12_1606 PF07445 Primosomal replication protein priC A6A12_1607 PF10689 Protein of unknown function (DUF2496) A6A12_1608 PF00672 HAMP domain A6A12_1608 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6A12_1609 PF03372 Endonuclease/Exonuclease/phosphatase family A6A12_1610 PF00528 Binding-protein-dependent transport system inner membrane component A6A12_1611 PF00528 Binding-protein-dependent transport system inner membrane component A6A12_1612 PF00497 Bacterial extracellular solute-binding proteins, family 3 A6A12_1613 PF00005 ABC transporter A6A12_1616 PF01228 Glycine radical A6A12_1616 PF02901 Pyruvate formate lyase-like A6A12_1618 PF00672 HAMP domain A6A12_1618 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6A12_1619 PF04055 Radical SAM superfamily A6A12_1622 PF08298 PrkA AAA domain A6A12_1622 PF06798 PrkA serine protein kinase C-terminal domain A6A12_1623 PF04285 Protein of unknown function (DUF444) A6A12_1624 PF04293 SpoVR like protein A6A12_1626 PF02348 Cytidylyltransferase A6A12_1627 PF03966 Trm112p-like protein A6A12_1628 PF02606 Tetraacyldisaccharide-1-P 4'-kinase A6A12_1629 PF00664 ABC transporter transmembrane region A6A12_1629 PF00005 ABC transporter A6A12_1630 PF03772 Competence protein A6A12_1630 PF13567 Domain of unknown function (DUF4131) A6A12_1630 PF00753 Metallo-beta-lactamase superfamily A6A12_1632 PF02687 FtsX-like permease family A6A12_1632 PF12704 MacB-like periplasmic core domain A6A12_1633 PF00005 ABC transporter A6A12_1634 PF12704 MacB-like periplasmic core domain A6A12_1634 PF02687 FtsX-like permease family A6A12_1636 PF03461 TRCF domain A6A12_1636 PF00271 Helicase conserved C-terminal domain A6A12_1636 PF00270 DEAD/DEAH box helicase A6A12_1636 PF02559 CarD-like/TRCF domain A6A12_1636 PF17757 UvrB interaction domain A6A12_1638 PF12563 Hemolytic toxin N terminal A6A12_1638 PF16458 Beta-prism lectin A6A12_1638 PF07968 Leukocidin/Hemolysin toxin family A6A12_1639 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6A12_1642 PF08139 Prokaryotic membrane lipoprotein lipid attachment site A6A12_1642 PF13036 Peptidoglycan-synthase activator LpoB A6A12_1645 PF01230 HIT domain A6A12_1646 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6A12_1646 PF00672 HAMP domain A6A12_1648 PF07840 FadR C-terminal domain A6A12_1648 PF00392 Bacterial regulatory proteins, gntR family A6A12_1650 PF06450 Bacterial Na+/H+ antiporter B (NhaB) A6A12_1651 PF02600 Disulfide bond formation protein DsbB A6A12_1653 PF08241 Methyltransferase domain A6A12_1654 PF00155 Aminotransferase class I and II A6A12_1655 PF04055 Radical SAM superfamily A6A12_1655 PF06968 Biotin and Thiamin Synthesis associated domain A6A12_1656 PF00202 Aminotransferase class-III A6A12_1657 PF02403 Seryl-tRNA synthetase N-terminal domain A6A12_1657 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A6A12_1658 PF16193 AAA C-terminal domain A6A12_1658 PF12002 MgsA AAA+ ATPase C terminal A6A12_1658 PF00004 ATPase family associated with various cellular activities (AAA) A6A12_1659 PF03548 Outer membrane lipoprotein carrier protein LolA A6A12_1660 PF07516 SecA Wing and Scaffold domain A6A12_1660 PF01043 SecA preprotein cross-linking domain A6A12_1660 PF07517 SecA DEAD-like domain A6A12_1660 PF02810 SEC-C motif A6A12_1661 PF01207 Dihydrouridine synthase (Dus) A6A12_1662 PF00005 ABC transporter A6A12_1663 PF02653 Branched-chain amino acid transport system / permease component A6A12_1665 PF04217 Protein of unknown function, DUF412 A6A12_1666 PF00871 Acetokinase family A6A12_1667 PF07085 DRTGG domain A6A12_1667 PF01515 Phosphate acetyl/butaryl transferase A6A12_1668 PF13409 Glutathione S-transferase, N-terminal domain A6A12_1669 PF00005 ABC transporter A6A12_1669 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A6A12_1670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A6A12_1670 PF00005 ABC transporter A6A12_1671 PF12911 N-terminal TM domain of oligopeptide transport permease C A6A12_1671 PF00528 Binding-protein-dependent transport system inner membrane component A6A12_1672 PF00528 Binding-protein-dependent transport system inner membrane component A6A12_1673 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A6A12_1674 PF03707 Bacterial signalling protein N terminal repeat A6A12_1674 PF00990 Diguanylate cyclase, GGDEF domain A6A12_1674 PF00563 EAL domain A6A12_1675 PF00512 His Kinase A (phospho-acceptor) domain A6A12_1675 PF09308 LuxQ, periplasmic A6A12_1675 PF00072 Response regulator receiver domain A6A12_1675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6A12_1676 PF04820 Tryptophan halogenase A6A12_1680 PF13737 Transposase DDE domain A6A12_1682 PF00550 Phosphopantetheine attachment site A6A12_1683 PF00550 Phosphopantetheine attachment site A6A12_1685 PF00501 AMP-binding enzyme A6A12_1685 PF13193 AMP-binding enzyme C-terminal domain A6A12_1687 PF00535 Glycosyl transferase family 2 A6A12_1688 PF00221 Aromatic amino acid lyase A6A12_1693 PF02801 Beta-ketoacyl synthase, C-terminal domain A6A12_1693 PF00109 Beta-ketoacyl synthase, N-terminal domain A6A12_1694 PF07977 FabA-like domain A6A12_1696 PF02801 Beta-ketoacyl synthase, C-terminal domain A6A12_1696 PF00109 Beta-ketoacyl synthase, N-terminal domain A6A12_1697 PF06629 MltA-interacting protein MipA A6A12_1700 PF01081 KDPG and KHG aldolase A6A12_1701 PF02447 GntP family permease A6A12_1702 PF01202 Shikimate kinase A6A12_1703 PF00920 Dehydratase family A6A12_1704 PF00356 Bacterial regulatory proteins, lacI family A6A12_1704 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family A6A12_1707 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6A12_1707 PF00672 HAMP domain A6A12_1707 PF00512 His Kinase A (phospho-acceptor) domain A6A12_1708 PF00486 Transcriptional regulatory protein, C terminal A6A12_1708 PF00072 Response regulator receiver domain A6A12_1709 PF02080 TrkA-C domain A6A12_1709 PF06826 Predicted Permease Membrane Region A6A12_1710 PF01810 LysE type translocator A6A12_1712 PF01037 Lrp/AsnC ligand binding domain A6A12_1713 PF00884 Sulfatase A6A12_1713 PF08019 Phosphoethanolamine transferase EptA/EptB A6A12_1714 PF08521 Two-component sensor kinase N-terminal A6A12_1714 PF00512 His Kinase A (phospho-acceptor) domain A6A12_1714 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6A12_1715 PF00072 Response regulator receiver domain A6A12_1715 PF00486 Transcriptional regulatory protein, C terminal A6A12_1717 PF00106 short chain dehydrogenase A6A12_1719 PF00501 AMP-binding enzyme A6A12_1722 PF03466 LysR substrate binding domain A6A12_1722 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6A12_1723 PF00990 Diguanylate cyclase, GGDEF domain A6A12_1725 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain A6A12_1726 PF09619 Type III secretion system lipoprotein chaperone (YscW) A6A12_1728 PF01037 Lrp/AsnC ligand binding domain A6A12_1728 PF13404 AsnC-type helix-turn-helix domain A6A12_1729 PF00291 Pyridoxal-phosphate dependent enzyme A6A12_1732 PF07690 Major Facilitator Superfamily A6A12_1735 PF13193 AMP-binding enzyme C-terminal domain A6A12_1735 PF00501 AMP-binding enzyme A6A12_1736 PF13378 Enolase C-terminal domain-like A6A12_1737 PF00378 Enoyl-CoA hydratase/isomerase A6A12_1738 PF12697 Alpha/beta hydrolase family A6A12_1739 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A6A12_1739 PF16582 Middle domain of thiamine pyrophosphate A6A12_1739 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A6A12_1740 PF00425 chorismate binding enzyme A6A12_1741 PF00155 Aminotransferase class I and II A6A12_1743 PF13286 Phosphohydrolase-associated domain A6A12_1743 PF01966 HD domain A6A12_1746 PF01343 Peptidase family S49 A6A12_1746 PF08496 Peptidase family S49 N-terminal A6A12_1747 PF00106 short chain dehydrogenase A6A12_1748 PF01584 CheW-like domain A6A12_1748 PF00072 Response regulator receiver domain A6A12_1749 PF00480 ROK family A6A12_1750 PF02887 Pyruvate kinase, alpha/beta domain A6A12_1750 PF00224 Pyruvate kinase, barrel domain A6A12_1751 PF01734 Patatin-like phospholipase A6A12_1753 PF00209 Sodium:neurotransmitter symporter family A6A12_1754 PF00367 phosphotransferase system, EIIB A6A12_1754 PF02378 Phosphotransferase system, EIIC A6A12_1755 PF01026 TatD related DNase A6A12_1756 PF09115 DNA polymerase III, delta subunit, C terminal A6A12_1757 PF02223 Thymidylate kinase A6A12_1758 PF02618 YceG-like family A6A12_1759 PF01063 Amino-transferase class IV A6A12_1760 PF02801 Beta-ketoacyl synthase, C-terminal domain A6A12_1760 PF00109 Beta-ketoacyl synthase, N-terminal domain A6A12_1761 PF00550 Phosphopantetheine attachment site A6A12_1763 PF00698 Acyl transferase domain A6A12_1764 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III A6A12_1764 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal A6A12_1765 PF02504 Fatty acid synthesis protein A6A12_1766 PF01783 Ribosomal L32p protein family A6A12_1767 PF02620 Large ribosomal RNA subunit accumulation protein YceD A6A12_1768 PF02545 Maf-like protein A6A12_1769 PF00849 RNA pseudouridylate synthase A6A12_1769 PF01479 S4 domain A6A12_1770 PF00575 S1 RNA binding domain A6A12_1770 PF10150 Ribonuclease E/G family A6A12_1770 PF12111 Polyribonucleotide phosphorylase C terminal A6A12_1772 PF00465 Iron-containing alcohol dehydrogenase A6A12_1772 PF00171 Aldehyde dehydrogenase family A6A12_1774 PF01914 MarC family integral membrane protein A6A12_1775 PF01118 Semialdehyde dehydrogenase, NAD binding domain A6A12_1775 PF02774 Semialdehyde dehydrogenase, dimerisation domain A6A12_1776 PF03553 Na+/H+ antiporter family A6A12_1778 PF04245 37-kD nucleoid-associated bacterial protein A6A12_1779 PF07208 Protein of unknown function (DUF1414) A6A12_1780 PF11893 Domain of unknown function (DUF3413) A6A12_1780 PF00884 Sulfatase A6A12_1782 PF00384 Molybdopterin oxidoreductase A6A12_1783 PF02634 FdhD/NarQ family A6A12_1790 PF01131 DNA topoisomerase A6A12_1790 PF01751 Toprim domain A6A12_1791 PF00462 Glutaredoxin A6A12_1792 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain A6A12_1792 PF02777 Iron/manganese superoxide dismutases, C-terminal domain A6A12_1796 PF04333 MlaA lipoprotein A6A12_1798 PF03918 Cytochrome C biogenesis protein A6A12_1799 PF08534 Redoxin A6A12_1800 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal A6A12_1800 PF01578 Cytochrome C assembly protein A6A12_1801 PF03100 CcmE A6A12_1803 PF01578 Cytochrome C assembly protein A6A12_1804 PF03379 CcmB protein A6A12_1805 PF00005 ABC transporter A6A12_1807 PF01584 CheW-like domain A6A12_1809 PF13614 AAA domain A6A12_1810 PF01339 CheB methylesterase A6A12_1810 PF00072 Response regulator receiver domain A6A12_1811 PF07194 P2 response regulator binding domain A6A12_1811 PF01627 Hpt domain A6A12_1811 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6A12_1811 PF02895 Signal transducing histidine kinase, homodimeric domain A6A12_1811 PF01584 CheW-like domain A6A12_1812 PF04344 Chemotaxis phosphatase, CheZ A6A12_1813 PF00072 Response regulator receiver domain A6A12_1814 PF04545 Sigma-70, region 4 A6A12_1814 PF04539 Sigma-70 region 3 A6A12_1814 PF04542 Sigma-70 region 2 A6A12_1815 PF10609 NUBPL iron-transfer P-loop NTPase A6A12_1816 PF00448 SRP54-type protein, GTPase domain A6A12_1817 PF00771 FHIPEP family A6A12_1818 PF00300 Histidine phosphatase superfamily (branch 1) A6A12_1819 PF00675 Insulinase (Peptidase family M16) A6A12_1819 PF05193 Peptidase M16 inactive domain A6A12_1820 PF06185 YecM protein A6A12_1821 PF05746 DALR anticodon binding domain A6A12_1821 PF00750 tRNA synthetases class I (R) A6A12_1821 PF03485 Arginyl tRNA synthetase N terminal domain A6A12_1824 PF07670 Nucleoside recognition A6A12_1824 PF02421 Ferrous iron transport protein B A6A12_1824 PF07664 Ferrous iron transport protein B C terminus A6A12_1825 PF04023 FeoA domain A6A12_1826 PF12833 Helix-turn-helix domain A6A12_1826 PF02311 AraC-like ligand binding domain A6A12_1827 PF01297 Zinc-uptake complex component A periplasmic A6A12_1828 PF00005 ABC transporter A6A12_1829 PF00950 ABC 3 transport family A6A12_1830 PF02629 CoA binding domain A6A12_1830 PF00549 CoA-ligase A6A12_1831 PF00549 CoA-ligase A6A12_1831 PF08442 ATP-grasp domain A6A12_1832 PF00364 Biotin-requiring enzyme A6A12_1832 PF02817 e3 binding domain A6A12_1832 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) A6A12_1833 PF00676 Dehydrogenase E1 component A6A12_1833 PF16078 2-oxoglutarate dehydrogenase N-terminus A6A12_1833 PF02779 Transketolase, pyrimidine binding domain A6A12_1833 PF16870 2-oxoglutarate dehydrogenase C-terminal A6A12_1834 PF13085 2Fe-2S iron-sulfur cluster binding domain A6A12_1835 PF02910 Fumarate reductase flavoprotein C-term A6A12_1835 PF00890 FAD binding domain A6A12_1836 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit A6A12_1837 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit A6A12_1838 PF00285 Citrate synthase, C-terminal domain A6A12_1839 PF01784 NIF3 (NGG1p interacting factor 3) A6A12_1841 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A6A12_1841 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A6A12_1841 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A6A12_1841 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A6A12_1842 PF03925 SeqA protein C-terminal domain A6A12_1842 PF17206 SeqA protein N-terminal domain A6A12_1843 PF12697 Alpha/beta hydrolase family A6A12_1845 PF00258 Flavodoxin A6A12_1846 PF04172 LrgB-like family A6A12_1847 PF03788 LrgA family A6A12_1848 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6A12_1848 PF03466 LysR substrate binding domain A6A12_1850 PF01475 Ferric uptake regulator family A6A12_1851 PF01118 Semialdehyde dehydrogenase, NAD binding domain A6A12_1851 PF02774 Semialdehyde dehydrogenase, dimerisation domain A6A12_1852 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A6A12_1852 PF11890 Domain of unknown function (DUF3410) A6A12_1852 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A6A12_1853 PF02801 Beta-ketoacyl synthase, C-terminal domain A6A12_1853 PF00109 Beta-ketoacyl synthase, N-terminal domain A6A12_1854 PF01266 FAD dependent oxidoreductase A6A12_1854 PF05430 S-adenosyl-L-methionine-dependent methyltransferase A6A12_1855 PF03358 NADPH-dependent FMN reductase A6A12_1857 PF08891 YfcL protein A6A12_1858 PF04315 Elongation factor P hydroxylase A6A12_1860 PF03458 UPF0126 domain A6A12_1861 PF01264 Chorismate synthase A6A12_1862 PF05175 Methyltransferase small domain A6A12_1863 PF01713 Smr domain A6A12_1864 PF01312 FlhB HrpN YscU SpaS Family A6A12_1865 PF01311 Bacterial export proteins, family 1 A6A12_1866 PF01313 Bacterial export proteins, family 3 A6A12_1867 PF00813 FliP family A6A12_1868 PF04347 Flagellar biosynthesis protein, FliO A6A12_1869 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term A6A12_1870 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term A6A12_1870 PF02154 Flagellar motor switch protein FliM A6A12_1874 PF18269 T3SS EscN ATPase C-terminal domain A6A12_1874 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A6A12_1876 PF14841 FliG middle domain A6A12_1876 PF14842 FliG N-terminal domain A6A12_1876 PF01706 FliG C-terminal domain A6A12_1877 PF08345 Flagellar M-ring protein C-terminal A6A12_1877 PF01514 Secretory protein of YscJ/FliF family A6A12_1878 PF02049 Flagellar hook-basal body complex protein FliE A6A12_1879 PF00072 Response regulator receiver domain A6A12_1879 PF02954 Bacterial regulatory protein, Fis family A6A12_1879 PF00158 Sigma-54 interaction domain A6A12_1880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6A12_1880 PF00512 His Kinase A (phospho-acceptor) domain A6A12_1881 PF00158 Sigma-54 interaction domain A6A12_1881 PF00072 Response regulator receiver domain A6A12_1881 PF02954 Bacterial regulatory protein, Fis family A6A12_1883 PF02561 Flagellar protein FliS A6A12_1885 PF07196 Flagellin hook IN motif A6A12_1885 PF07195 Flagellar hook-associated protein 2 C-terminus A6A12_1885 PF02465 Flagellar hook-associated protein 2 N-terminus A6A12_1886 PF03646 FlaG protein A6A12_1887 PF00700 Bacterial flagellin C-terminal helical region A6A12_1887 PF00669 Bacterial flagellin N-terminal helical region A6A12_1887 PF07196 Flagellin hook IN motif A6A12_1889 PF07196 Flagellin hook IN motif A6A12_1889 PF00700 Bacterial flagellin C-terminal helical region A6A12_1889 PF00669 Bacterial flagellin N-terminal helical region A6A12_1890 PF00700 Bacterial flagellin C-terminal helical region A6A12_1890 PF07196 Flagellin hook IN motif A6A12_1890 PF00669 Bacterial flagellin N-terminal helical region A6A12_1891 PF04261 Dyp-type peroxidase family A6A12_1892 PF11143 Protein of unknown function (DUF2919) A6A12_1896 PF03960 ArsC family A6A12_1897 PF01546 Peptidase family M20/M25/M40 A6A12_1897 PF07687 Peptidase dimerisation domain A6A12_1901 PF00701 Dihydrodipicolinate synthetase family A6A12_1903 PF00578 AhpC/TSA family A6A12_1909 PF00578 AhpC/TSA family A6A12_1920 PF13361 UvrD-like helicase C-terminal domain A6A12_1920 PF00580 UvrD/REP helicase N-terminal domain A6A12_1925 PF00578 AhpC/TSA family A6A12_1926 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6A12_1926 PF00672 HAMP domain A6A12_1926 PF02743 Cache domain A6A12_1927 PF01594 AI-2E family transporter A6A12_1930 PF01435 Peptidase family M48 A6A12_1930 PF13181 Tetratricopeptide repeat A6A12_1931 PF03960 ArsC family A6A12_1932 PF03358 NADPH-dependent FMN reductase A6A12_1935 PF00860 Permease family A6A12_1936 PF04073 Aminoacyl-tRNA editing domain A6A12_1937 PF02872 5'-nucleotidase, C-terminal domain A6A12_1937 PF00149 Calcineurin-like phosphoesterase A6A12_1938 PF00793 DAHP synthetase I family A6A12_1939 PF13369 Transglutaminase-like superfamily A6A12_1940 PF04247 Invasion gene expression up-regulator, SirB A6A12_1941 PF17827 PrmC N-terminal domain A6A12_1941 PF13847 Methyltransferase domain A6A12_1942 PF00472 RF-1 domain A6A12_1942 PF03462 PCRF domain A6A12_1943 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain A6A12_1943 PF01488 Shikimate / quinate 5-dehydrogenase A6A12_1943 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain A6A12_1944 PF03550 Outer membrane lipoprotein LolB A6A12_1945 PF00288 GHMP kinases N terminal domain A6A12_1945 PF08544 GHMP kinases C terminal A6A12_1946 PF14572 Phosphoribosyl synthetase-associated domain A6A12_1946 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase A6A12_1948 PF01195 Peptidyl-tRNA hydrolase A6A12_1949 PF06071 Protein of unknown function (DUF933) A6A12_1949 PF01926 50S ribosome-binding GTPase A6A12_1957 PF07196 Flagellin hook IN motif A6A12_1957 PF00669 Bacterial flagellin N-terminal helical region A6A12_1957 PF00700 Bacterial flagellin C-terminal helical region A6A12_1958 PF00700 Bacterial flagellin C-terminal helical region A6A12_1958 PF07196 Flagellin hook IN motif A6A12_1958 PF00669 Bacterial flagellin N-terminal helical region A6A12_1959 PF00669 Bacterial flagellin N-terminal helical region A6A12_1960 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A6A12_1960 PF07196 Flagellin hook IN motif A6A12_1961 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase A6A12_1961 PF10135 Rod binding protein A6A12_1962 PF02119 Flagellar P-ring protein A6A12_1963 PF02107 Flagellar L-ring protein A6A12_1964 PF00460 Flagella basal body rod protein A6A12_1964 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A6A12_1965 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A6A12_1965 PF00460 Flagella basal body rod protein A6A12_1966 PF00460 Flagella basal body rod protein A6A12_1966 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A6A12_1966 PF07559 Flagellar basal body protein FlaE A6A12_1967 PF13861 FlgD Tudor-like domain A6A12_1967 PF13860 FlgD Ig-like domain A6A12_1967 PF03963 Flagellar hook capping protein - N-terminal region A6A12_1968 PF00460 Flagella basal body rod protein A6A12_1968 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A6A12_1969 PF00460 Flagella basal body rod protein A6A12_1970 PF01739 CheR methyltransferase, SAM binding domain A6A12_1970 PF03705 CheR methyltransferase, all-alpha domain A6A12_1971 PF01584 CheW-like domain A6A12_1971 PF00072 Response regulator receiver domain A6A12_1973 PF04316 Anti-sigma-28 factor, FlgM A6A12_1980 PF01389 OmpA-like transmembrane domain A6A12_1980 PF00691 OmpA family A6A12_1981 PF00749 tRNA synthetases class I (E and Q), catalytic domain A6A12_1982 PF00403 Heavy-metal-associated domain A6A12_1984 PF02838 Glycosyl hydrolase family 20, domain 2 A6A12_1984 PF00728 Glycosyl hydrolase family 20, catalytic domain A6A12_1984 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain A6A12_1984 PF03173 Putative carbohydrate binding domain A6A12_1989 PF01479 S4 domain A6A12_1989 PF00849 RNA pseudouridylate synthase A6A12_1991 PF02769 AIR synthase related protein, C-terminal domain A6A12_1991 PF00586 AIR synthase related protein, N-terminal domain A6A12_1992 PF00551 Formyl transferase A6A12_1993 PF13230 Glutamine amidotransferases class-II A6A12_1994 PF13580 SIS domain A6A12_1995 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A6A12_1995 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A6A12_1995 PF09317 Domain of unknown function (DUF1974) A6A12_1995 PF02770 Acyl-CoA dehydrogenase, middle domain A6A12_1997 PF00929 Exonuclease A6A12_1998 PF00075 RNase H A6A12_1999 PF08241 Methyltransferase domain A6A12_2000 PF00753 Metallo-beta-lactamase superfamily A6A12_2000 PF16123 Hydroxyacylglutathione hydrolase C-terminus A6A12_2001 PF01476 LysM domain A6A12_2001 PF01464 Transglycosylase SLT domain A6A12_2003 PF03372 Endonuclease/Exonuclease/phosphatase family A6A12_2004 PF00543 Nitrogen regulatory protein P-II A6A12_2005 PF00034 Cytochrome c A6A12_2006 PF09179 TilS substrate binding domain A6A12_2006 PF11734 TilS substrate C-terminal domain A6A12_2006 PF01171 PP-loop family A6A12_2007 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit A6A12_2008 PF17657 Bacterial DNA polymerase III alpha subunit finger domain A6A12_2008 PF07733 Bacterial DNA polymerase III alpha NTPase domain A6A12_2008 PF14579 Helix-hairpin-helix motif A6A12_2008 PF02811 PHP domain A6A12_2008 PF01336 OB-fold nucleic acid binding domain A6A12_2009 PF01351 Ribonuclease HII A6A12_2010 PF02684 Lipid-A-disaccharide synthetase A6A12_2011 PF00132 Bacterial transferase hexapeptide (six repeats) A6A12_2011 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 A6A12_2012 PF07977 FabA-like domain A6A12_2013 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD A6A12_2013 PF00132 Bacterial transferase hexapeptide (six repeats) A6A12_2014 PF03938 Outer membrane protein (OmpH-like) A6A12_2015 PF01103 Surface antigen A6A12_2015 PF07244 Surface antigen variable number repeat A6A12_2016 PF17820 PDZ domain A6A12_2016 PF02163 Peptidase family M50 A6A12_2017 PF13288 DXP reductoisomerase C-terminal domain A6A12_2017 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain A6A12_2017 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase A6A12_2019 PF01255 Putative undecaprenyl diphosphate synthase A6A12_2020 PF01765 Ribosome recycling factor A6A12_2021 PF00696 Amino acid kinase family A6A12_2022 PF00889 Elongation factor TS A6A12_2023 PF00318 Ribosomal protein S2 A6A12_2024 PF00557 Metallopeptidase family M24 A6A12_2026 PF11944 Protein of unknown function (DUF3461) A6A12_2027 PF04608 Phosphatidylglycerophosphatase A A6A12_2028 PF02769 AIR synthase related protein, C-terminal domain A6A12_2028 PF00586 AIR synthase related protein, N-terminal domain A6A12_2030 PF00885 6,7-dimethyl-8-ribityllumazine synthase A6A12_2031 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase A6A12_2031 PF00925 GTP cyclohydrolase II A6A12_2032 PF00677 Lumazine binding domain A6A12_2033 PF01872 RibD C-terminal domain A6A12_2033 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region A6A12_2034 PF03477 ATP cone domain A6A12_2035 PF00171 Aldehyde dehydrogenase family A6A12_2036 PF01472 PUA domain A6A12_2036 PF00696 Amino acid kinase family A6A12_2037 PF07417 Sigma factor-binding transcriptional regulator Crl A6A12_2040 PF00860 Permease family A6A12_2041 PF01546 Peptidase family M20/M25/M40 A6A12_2041 PF07687 Peptidase dimerisation domain A6A12_2043 PF08443 RimK-like ATP-grasp domain A6A12_2043 PF18030 RimK PreATP-grasp domain A6A12_2044 PF18030 RimK PreATP-grasp domain A6A12_2044 PF08443 RimK-like ATP-grasp domain A6A12_2046 PF00209 Sodium:neurotransmitter symporter family A6A12_2047 PF00990 Diguanylate cyclase, GGDEF domain A6A12_2047 PF01590 GAF domain A6A12_2047 PF00563 EAL domain A6A12_2047 PF00360 Phytochrome region A6A12_2050 PF11798 IMS family HHH motif A6A12_2050 PF11799 impB/mucB/samB family C-terminal domain A6A12_2050 PF00817 impB/mucB/samB family A6A12_2052 PF02424 ApbE family A6A12_2054 PF00111 2Fe-2S iron-sulfur cluster binding domain A6A12_2054 PF00970 Oxidoreductase FAD-binding domain A6A12_2054 PF00175 Oxidoreductase NAD-binding domain A6A12_2055 PF02508 Rnf-Nqr subunit, membrane protein A6A12_2056 PF02508 Rnf-Nqr subunit, membrane protein A6A12_2057 PF04205 FMN-binding domain A6A12_2058 PF03116 NQR2, RnfD, RnfE family A6A12_2059 PF11973 NQRA C-terminal domain A6A12_2059 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) A6A12_2060 PF01722 BolA-like protein A6A12_2061 PF05175 Methyltransferase small domain A6A12_2063 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD A6A12_2064 PF07690 Major Facilitator Superfamily A6A12_2066 PF04545 Sigma-70, region 4 A6A12_2066 PF04542 Sigma-70 region 2 A6A12_2068 PF03502 Nucleoside-specific channel-forming protein, Tsx A6A12_2069 PF08546 Ketopantoate reductase PanE/ApbA C terminal A6A12_2069 PF02558 Ketopantoate reductase PanE/ApbA A6A12_2070 PF01965 DJ-1/PfpI family A6A12_2071 PF00266 Aminotransferase class-V A6A12_2072 PF02657 Fe-S metabolism associated domain A6A12_2073 PF00899 ThiF family A6A12_2074 PF03562 MltA specific insert domain A6A12_2074 PF06725 3D domain A6A12_2077 PF00583 Acetyltransferase (GNAT) family A6A12_2077 PF00696 Amino acid kinase family A6A12_2079 PF13538 UvrD-like helicase C-terminal domain A6A12_2080 PF13361 UvrD-like helicase C-terminal domain A6A12_2080 PF12705 PD-(D/E)XK nuclease superfamily A6A12_2080 PF00580 UvrD/REP helicase N-terminal domain A6A12_2081 PF17946 RecC C-terminal domain A6A12_2084 PF07130 YebG protein A6A12_2085 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle A6A12_2085 PF14602 Hexapeptide repeat of succinyl-transferase A6A12_2087 PF00583 Acetyltransferase (GNAT) family A6A12_2089 PF01544 CorA-like Mg2+ transporter protein A6A12_2091 PF00356 Bacterial regulatory proteins, lacI family A6A12_2092 PF10509 Galactokinase galactose-binding signature A6A12_2092 PF00288 GHMP kinases N terminal domain A6A12_2092 PF08544 GHMP kinases C terminal A6A12_2093 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain A6A12_2093 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain A6A12_2094 PF16363 GDP-mannose 4,6 dehydratase A6A12_2096 PF01554 MatE A6A12_2098 PF11849 Domain of unknown function (DUF3369) A6A12_2099 PF00501 AMP-binding enzyme A6A12_2100 PF09905 DNA-binding protein VF530 A6A12_2101 PF03144 Elongation factor Tu domain 2 A6A12_2101 PF00009 Elongation factor Tu GTP binding domain A6A12_2101 PF03764 Elongation factor G, domain IV A6A12_2101 PF14492 Elongation Factor G, domain II A6A12_2101 PF00679 Elongation factor G C-terminus A6A12_2102 PF18073 Rubredoxin metal binding domain A6A12_2104 PF18429 Domain of unknown function (DUF5609) A6A12_2106 PF01048 Phosphorylase superfamily A6A12_2107 PF01676 Metalloenzyme superfamily A6A12_2108 PF02885 Glycosyl transferase family, helical bundle domain A6A12_2108 PF00591 Glycosyl transferase family, a/b domain A6A12_2108 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain A6A12_2109 PF01791 DeoC/LacD family aldolase A6A12_2110 PF07662 Na+ dependent nucleoside transporter C-terminus A6A12_2110 PF01773 Na+ dependent nucleoside transporter N-terminus A6A12_2110 PF07670 Nucleoside recognition A6A12_2111 PF01026 TatD related DNase A6A12_2114 PF01235 Sodium:alanine symporter family A6A12_2119 PF03167 Uracil DNA glycosylase superfamily A6A12_2120 PF01261 Xylose isomerase-like TIM barrel A6A12_2121 PF01228 Glycine radical A6A12_2122 PF00291 Pyridoxal-phosphate dependent enzyme A6A12_2122 PF14821 Threonine synthase N terminus A6A12_2123 PF08544 GHMP kinases C terminal A6A12_2123 PF00288 GHMP kinases N terminal domain A6A12_2124 PF01842 ACT domain A6A12_2124 PF03447 Homoserine dehydrogenase, NAD binding domain A6A12_2124 PF00742 Homoserine dehydrogenase A6A12_2124 PF13840 ACT domain A6A12_2124 PF00696 Amino acid kinase family A6A12_2126 PF03737 Aldolase/RraA A6A12_2127 PF00072 Response regulator receiver domain A6A12_2127 PF00486 Transcriptional regulatory protein, C terminal A6A12_2129 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6A12_2129 PF18415 Histidine kinase receptor ArcB trans-membrane domain A6A12_2129 PF01627 Hpt domain A6A12_2129 PF00072 Response regulator receiver domain A6A12_2129 PF00512 His Kinase A (phospho-acceptor) domain A6A12_2129 PF00989 PAS fold A6A12_2130 PF04055 Radical SAM superfamily A6A12_2130 PF16199 Radical_SAM C-terminal domain A6A12_2131 PF01493 GXGXG motif A6A12_2131 PF01645 Conserved region in glutamate synthase A6A12_2131 PF04898 Glutamate synthase central domain A6A12_2131 PF00310 Glutamine amidotransferases class-II A6A12_2132 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6A12_2132 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster A6A12_2133 PF00310 Glutamine amidotransferases class-II A6A12_2133 PF04898 Glutamate synthase central domain A6A12_2133 PF01645 Conserved region in glutamate synthase A6A12_2133 PF01493 GXGXG motif A6A12_2134 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster A6A12_2134 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6A12_2138 PF01497 Periplasmic binding protein A6A12_2139 PF03458 UPF0126 domain A6A12_2140 PF01925 Sulfite exporter TauE/SafE A6A12_2141 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A6A12_2141 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A6A12_2141 PF02142 MGS-like domain A6A12_2142 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain A6A12_2142 PF00117 Glutamine amidotransferase class-I A6A12_2145 PF00293 NUDIX domain A6A12_2146 PF07516 SecA Wing and Scaffold domain A6A12_2146 PF01043 SecA preprotein cross-linking domain A6A12_2146 PF07517 SecA DEAD-like domain A6A12_2146 PF02810 SEC-C motif A6A12_2148 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase A6A12_2149 PF12327 FtsZ family, C-terminal domain A6A12_2149 PF00091 Tubulin/FtsZ family, GTPase domain A6A12_2150 PF02491 SHS2 domain inserted in FTSA A6A12_2151 PF03799 Cell division protein FtsQ A6A12_2151 PF08478 POTRA domain, FtsQ-type A6A12_2152 PF01225 Mur ligase family, catalytic domain A6A12_2152 PF02875 Mur ligase family, glutamate ligase domain A6A12_2152 PF08245 Mur ligase middle domain A6A12_2153 PF04101 Glycosyltransferase family 28 C-terminal domain A6A12_2153 PF03033 Glycosyltransferase family 28 N-terminal domain A6A12_2154 PF01098 Cell cycle protein A6A12_2155 PF02875 Mur ligase family, glutamate ligase domain A6A12_2155 PF08245 Mur ligase middle domain A6A12_2156 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 A6A12_2156 PF00953 Glycosyl transferase family 4 A6A12_2157 PF01225 Mur ligase family, catalytic domain A6A12_2157 PF02875 Mur ligase family, glutamate ligase domain A6A12_2157 PF08245 Mur ligase middle domain A6A12_2158 PF01225 Mur ligase family, catalytic domain A6A12_2158 PF02875 Mur ligase family, glutamate ligase domain A6A12_2158 PF08245 Mur ligase middle domain A6A12_2159 PF03717 Penicillin-binding Protein dimerisation domain A6A12_2159 PF00905 Penicillin binding protein transpeptidase domain A6A12_2160 PF04999 Cell division protein FtsL A6A12_2161 PF01795 MraW methylase family A6A12_2162 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A6A12_2164 PF04348 LppC putative lipoprotein A6A12_2165 PF02021 Uncharacterised protein family UPF0102 A6A12_2166 PF13580 SIS domain A6A12_2167 PF04972 BON domain A6A12_2168 PF04386 Stringent starvation protein B A6A12_2169 PF02798 Glutathione S-transferase, N-terminal domain A6A12_2169 PF00043 Glutathione S-transferase, C-terminal domain A6A12_2170 PF02167 Cytochrome C1 family A6A12_2171 PF00033 Cytochrome b/b6/petB A6A12_2171 PF00032 Cytochrome b(C-terminal)/b6/petD A6A12_2172 PF00355 Rieske [2Fe-2S] domain A6A12_2172 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal A6A12_2173 PF00380 Ribosomal protein S9/S16 A6A12_2174 PF00572 Ribosomal protein L13 A6A12_2175 PF03969 AFG1-like ATPase A6A12_2176 PF06295 Protein of unknown function (DUF1043) A6A12_2177 PF00595 PDZ domain A6A12_2178 PF13180 PDZ domain A6A12_2179 PF00521 DNA gyrase/topoisomerase IV, subunit A A6A12_2179 PF03989 DNA gyrase C-terminal domain, beta-propeller A6A12_2180 PF01751 Toprim domain A6A12_2180 PF00986 DNA gyrase B subunit, carboxyl terminus A6A12_2180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6A12_2180 PF00204 DNA gyrase B A6A12_2181 PF05728 Uncharacterised protein family (UPF0227) A6A12_2182 PF00149 Calcineurin-like phosphoesterase A6A12_2183 PF06853 Protein of unknown function (DUF1249) A6A12_2184 PF00293 NUDIX domain A6A12_2185 PF02321 Outer membrane efflux protein A6A12_2186 PF00294 pfkB family carbohydrate kinase A6A12_2186 PF01467 Cytidylyltransferase-like A6A12_2187 PF03710 Glutamate-ammonia ligase adenylyltransferase A6A12_2187 PF08335 GlnD PII-uridylyltransferase A6A12_2188 PF00672 HAMP domain A6A12_2188 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6A12_2190 PF01928 CYTH domain A6A12_2192 PF01865 Protein of unknown function DUF47 A6A12_2193 PF01384 Phosphate transporter family A6A12_2194 PF08239 Bacterial SH3 domain A6A12_2196 PF01471 Putative peptidoglycan binding domain A6A12_2196 PF13401 AAA domain A6A12_2197 PF01743 Poly A polymerase head domain A6A12_2197 PF12627 Probable RNA and SrmB- binding site of polymerase A A6A12_2197 PF01966 HD domain A6A12_2198 PF03952 Enolase, N-terminal domain A6A12_2198 PF00113 Enolase, C-terminal TIM barrel domain A6A12_2199 PF06418 CTP synthase N-terminus A6A12_2199 PF00117 Glutamine amidotransferase class-I A6A12_2200 PF03819 MazG nucleotide pyrophosphohydrolase domain A6A12_2201 PF13291 ACT domain A6A12_2201 PF04607 Region found in RelA / SpoT proteins A6A12_2201 PF02824 TGS domain A6A12_2202 PF01938 TRAM domain A6A12_2202 PF05958 tRNA (Uracil-5-)-methyltransferase A6A12_2203 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6A12_2203 PF00072 Response regulator receiver domain A6A12_2203 PF01627 Hpt domain A6A12_2203 PF00512 His Kinase A (phospho-acceptor) domain A6A12_2203 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) A6A12_2203 PF00672 HAMP domain A6A12_2204 PF01648 4'-phosphopantetheinyl transferase superfamily A6A12_2205 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ A6A12_2207 PF07650 KH domain A6A12_2207 PF01926 50S ribosome-binding GTPase A6A12_2209 PF10502 Signal peptidase, peptidase S26 A6A12_2210 PF00679 Elongation factor G C-terminus A6A12_2210 PF00009 Elongation factor Tu GTP binding domain A6A12_2210 PF03144 Elongation factor Tu domain 2 A6A12_2210 PF06421 GTP-binding protein LepA C-terminus A6A12_2212 PF03888 MucB/RseB N-terminal domain A6A12_2212 PF17188 MucB/RseB C-terminal domain A6A12_2213 PF03872 Anti sigma-E protein RseA, N-terminal domain A6A12_2213 PF03873 Anti sigma-E protein RseA, C-terminal domain A6A12_2214 PF04542 Sigma-70 region 2 A6A12_2214 PF08281 Sigma-70, region 4 A6A12_2216 PF00890 FAD binding domain A6A12_2216 PF02910 Fumarate reductase flavoprotein C-term A6A12_2218 PF03937 Flavinator of succinate dehydrogenase A6A12_2221 PF01494 FAD binding domain A6A12_2222 PF01494 FAD binding domain A6A12_2225 PF05164 Cell division protein ZapA A6A12_2226 PF01812 5-formyltetrahydrofolate cyclo-ligase family A6A12_2227 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) A6A12_2228 PF01842 ACT domain A6A12_2228 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A6A12_2228 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A6A12_2229 PF10369 Small subunit of acetolactate synthase A6A12_2230 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A6A12_2230 PF00205 Thiamine pyrophosphate enzyme, central domain A6A12_2230 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A6A12_2231 PF00501 AMP-binding enzyme A6A12_2232 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6A12_2232 PF03466 LysR substrate binding domain A6A12_2235 PF01569 PAP2 superfamily A6A12_2237 PF00682 HMGL-like A6A12_2237 PF08502 LeuA allosteric (dimerisation) domain A6A12_2238 PF00180 Isocitrate/isopropylmalate dehydrogenase A6A12_2239 PF00330 Aconitase family (aconitate hydratase) A6A12_2240 PF00694 Aconitase C-terminal domain A6A12_2254 PF03739 Lipopolysaccharide export system permease LptF/LptG A6A12_2255 PF03739 Lipopolysaccharide export system permease LptF/LptG A6A12_2256 PF02789 Cytosol aminopeptidase family, N-terminal domain A6A12_2256 PF00883 Cytosol aminopeptidase family, catalytic domain A6A12_2257 PF04364 DNA polymerase III chi subunit, HolC A6A12_2258 PF08264 Anticodon-binding domain of tRNA A6A12_2258 PF10458 Valyl tRNA synthetase tRNA binding arm A6A12_2258 PF00133 tRNA synthetases class I (I, L, M and V) A6A12_2259 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A6A12_2259 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A6A12_2260 PF00849 RNA pseudouridylate synthase A6A12_2262 PF00271 Helicase conserved C-terminal domain A6A12_2262 PF18337 RapA N-terminal Tudor like domain A6A12_2262 PF18339 RapA N-terminal Tudor like domain 1 A6A12_2262 PF00176 SNF2 family N-terminal domain A6A12_2262 PF12137 RNA polymerase recycling family C-terminal A6A12_2264 PF02562 PhoH-like protein A6A12_2264 PF13638 PIN domain A6A12_2265 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain A6A12_2265 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain A6A12_2266 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain A6A12_2266 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain A6A12_2267 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain A6A12_2267 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain A6A12_2268 PF01042 Endoribonuclease L-PSP A6A12_2270 PF00072 Response regulator receiver domain A6A12_2270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6A12_2270 PF13188 PAS domain A6A12_2270 PF00512 His Kinase A (phospho-acceptor) domain A6A12_2270 PF08448 PAS fold A6A12_2271 PF01553 Acyltransferase A6A12_2272 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) A6A12_2273 PF01722 BolA-like protein A6A12_2275 PF05494 MlaC protein A6A12_2276 PF02470 MlaD protein A6A12_2277 PF02405 Permease MlaE A6A12_2278 PF00005 ABC transporter A6A12_2279 PF01699 Sodium/calcium exchanger protein A6A12_2280 PF01380 SIS domain A6A12_2280 PF00571 CBS domain A6A12_2283 PF03968 OstA-like protein A6A12_2284 PF12399 Branched-chain amino acid ATP-binding cassette transporter A6A12_2284 PF00005 ABC transporter A6A12_2285 PF00309 Sigma-54 factor, Activator interacting domain (AID) A6A12_2285 PF04963 Sigma-54 factor, core binding domain A6A12_2285 PF04552 Sigma-54, DNA binding domain A6A12_2286 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein A6A12_2287 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A6A12_2288 PF03668 P-loop ATPase protein family A6A12_2289 PF00381 PTS HPr component phosphorylation site A6A12_2290 PF01769 Divalent cation transporter A6A12_2290 PF03448 MgtE intracellular N domain A6A12_2290 PF00571 CBS domain A6A12_2291 PF01523 Putative modulator of DNA gyrase A6A12_2292 PF04751 Protein of unknown function (DUF615) A6A12_2293 PF00005 ABC transporter A6A12_2294 PF00528 Binding-protein-dependent transport system inner membrane component A6A12_2296 PF02441 Flavoprotein A6A12_2297 PF08245 Mur ligase middle domain A6A12_2297 PF02875 Mur ligase family, glutamate ligase domain A6A12_2297 PF01225 Mur ligase family, catalytic domain A6A12_2298 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain A6A12_2299 PF00719 Inorganic pyrophosphatase A6A12_2300 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like A6A12_2301 PF04357 TamB, inner membrane protein subunit of TAM complex A6A12_2302 PF07244 Surface antigen variable number repeat A6A12_2302 PF01103 Surface antigen A6A12_2302 PF17243 POTRA domain TamA domain 1 A6A12_2303 PF01625 Peptide methionine sulfoxide reductase A6A12_2304 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) A6A12_2307 PF00005 ABC transporter A6A12_2312 PF00009 Elongation factor Tu GTP binding domain A6A12_2313 PF01507 Phosphoadenosine phosphosulfate reductase family A6A12_2314 PF10414 Sirohaem synthase dimerisation region A6A12_2314 PF14824 Sirohaem biosynthesis protein central A6A12_2314 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A6A12_2315 PF02872 5'-nucleotidase, C-terminal domain A6A12_2315 PF00149 Calcineurin-like phosphoesterase A6A12_2323 PF03880 DbpA RNA binding domain A6A12_2323 PF00270 DEAD/DEAH box helicase A6A12_2323 PF00271 Helicase conserved C-terminal domain A6A12_2324 PF13673 Acetyltransferase (GNAT) domain A6A12_2325 PF04225 Opacity-associated protein A LysM-like domain A6A12_2325 PF08525 Opacity-associated protein A N-terminal motif A6A12_2326 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A6A12_2326 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase A6A12_2327 PF01196 Ribosomal protein L17 A6A12_2329 PF00163 Ribosomal protein S4/S9 N-terminal domain A6A12_2329 PF01479 S4 domain A6A12_2330 PF00411 Ribosomal protein S11 A6A12_2331 PF00416 Ribosomal protein S13/S18 A6A12_2332 PF00444 Ribosomal protein L36 A6A12_2333 PF00344 SecY translocase A6A12_2334 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A A6A12_2335 PF00327 Ribosomal protein L30p/L7e A6A12_2337 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast A6A12_2338 PF00347 Ribosomal protein L6 A6A12_2339 PF00410 Ribosomal protein S8 A6A12_2340 PF00253 Ribosomal protein S14p/S29e A6A12_2341 PF00673 ribosomal L5P family C-terminus A6A12_2341 PF00281 Ribosomal protein L5 A6A12_2343 PF00238 Ribosomal protein L14p/L23e A6A12_2344 PF00366 Ribosomal protein S17 A6A12_2345 PF00831 Ribosomal L29 protein A6A12_2346 PF00252 Ribosomal protein L16p/L10e A6A12_2347 PF07650 KH domain A6A12_2347 PF00189 Ribosomal protein S3, C-terminal domain A6A12_2348 PF00237 Ribosomal protein L22p/L17e A6A12_2349 PF00203 Ribosomal protein S19 A6A12_2350 PF03947 Ribosomal Proteins L2, C-terminal domain A6A12_2350 PF00181 Ribosomal Proteins L2, RNA binding domain A6A12_2351 PF00276 Ribosomal protein L23 A6A12_2354 PF00338 Ribosomal protein S10p/S20e A6A12_2355 PF08032 RNA 2'-O ribose methyltransferase substrate binding A6A12_2355 PF00588 SpoU rRNA Methylase family A6A12_2356 PF00575 S1 RNA binding domain A6A12_2356 PF08206 Ribonuclease B OB domain A6A12_2356 PF00773 RNB domain A6A12_2356 PF08461 Ribonuclease R winged-helix domain A6A12_2356 PF17876 Cold shock domain A6A12_2358 PF08238 Sel1 repeat A6A12_2360 PF00709 Adenylosuccinate synthetase A6A12_2361 PF01112 Asparaginase A6A12_2362 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A6A12_2363 PF09526 Probable metal-binding protein (DUF2387) A6A12_2364 PF00999 Sodium/hydrogen exchanger family A6A12_2364 PF02254 TrkA-N domain A6A12_2365 PF02525 Flavodoxin-like fold A6A12_2366 PF12848 ABC transporter A6A12_2366 PF00005 ABC transporter A6A12_2368 PF00561 alpha/beta hydrolase fold A6A12_2369 PF06794 Uncharacterised protein family (UPF0270) A6A12_2370 PF00485 Phosphoribulokinase / Uridine kinase family A6A12_2371 PF13545 Crp-like helix-turn-helix domain A6A12_2371 PF00027 Cyclic nucleotide-binding domain A6A12_2374 PF04958 Arginine N-succinyltransferase beta subunit A6A12_2375 PF00202 Aminotransferase class-III A6A12_2376 PF00117 Glutamine amidotransferase class-I A6A12_2378 PF01494 FAD binding domain A6A12_2380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6A12_2380 PF03466 LysR substrate binding domain A6A12_2383 PF00579 tRNA synthetases class I (W and Y) A6A12_2384 PF13419 Haloacid dehalogenase-like hydrolase A6A12_2385 PF00834 Ribulose-phosphate 3 epimerase family A6A12_2386 PF02086 D12 class N6 adenine-specific DNA methyltransferase A6A12_2389 PF01202 Shikimate kinase A6A12_2390 PF00263 Bacterial type II and III secretion system protein A6A12_2390 PF11741 AMIN domain A6A12_2390 PF03958 Bacterial type II/III secretion system short domain A6A12_2390 PF07660 Secretin and TonB N terminus short domain A6A12_2395 PF17092 Penicillin-binding protein OB-like domain A6A12_2395 PF00912 Transglycosylase A6A12_2395 PF00905 Penicillin binding protein transpeptidase domain A6A12_2396 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6A12_2396 PF03466 LysR substrate binding domain A6A12_2397 PF00462 Glutaredoxin A6A12_2397 PF08534 Redoxin A6A12_2398 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6A12_2398 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A6A12_2400 PF00583 Acetyltransferase (GNAT) family A6A12_2400 PF14698 Argininosuccinate lyase C-terminal A6A12_2400 PF00206 Lyase A6A12_2401 PF00764 Arginosuccinate synthase A6A12_2402 PF00696 Amino acid kinase family A6A12_2403 PF01118 Semialdehyde dehydrogenase, NAD binding domain A6A12_2403 PF02774 Semialdehyde dehydrogenase, dimerisation domain A6A12_2407 PF00132 Bacterial transferase hexapeptide (six repeats) A6A12_2407 PF06426 Serine acetyltransferase, N-terminal A6A12_2408 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus A6A12_2408 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus A6A12_2409 PF02556 Preprotein translocase subunit SecB A6A12_2410 PF00581 Rhodanese-like domain A6A12_2411 PF00152 tRNA synthetases class II (D, K and N) A6A12_2412 PF00890 FAD binding domain A6A12_2412 PF02910 Fumarate reductase flavoprotein C-term A6A12_2413 PF13183 4Fe-4S dicluster domain A6A12_2413 PF13085 2Fe-2S iron-sulfur cluster binding domain A6A12_2414 PF02300 Fumarate reductase subunit C A6A12_2415 PF02313 Fumarate reductase subunit D A6A12_2416 PF08207 Elongation factor P (EF-P) KOW-like domain A6A12_2416 PF09285 Elongation factor P, C-terminal A6A12_2416 PF01132 Elongation factor P (EF-P) OB domain A6A12_2417 PF04055 Radical SAM superfamily A6A12_2418 PF02308 MgtC family A6A12_2421 PF00118 TCP-1/cpn60 chaperonin family A6A12_2422 PF00166 Chaperonin 10 Kd subunit A6A12_2427 PF00121 Triosephosphate isomerase A6A12_2428 PF01554 MatE A6A12_2429 PF03737 Aldolase/RraA A6A12_2430 PF01040 UbiA prenyltransferase family A6A12_2431 PF00004 ATPase family associated with various cellular activities (AAA) A6A12_2431 PF07724 AAA domain (Cdc48 subfamily) A6A12_2431 PF10431 C-terminal, D2-small domain, of ClpB protein A6A12_2432 PF00227 Proteasome subunit A6A12_2434 PF00356 Bacterial regulatory proteins, lacI family A6A12_2435 PF00271 Helicase conserved C-terminal domain A6A12_2435 PF00270 DEAD/DEAH box helicase A6A12_2435 PF17764 3′ DNA-binding domain (3′BD) A6A12_2435 PF18074 Primosomal protein N C-terminal domain A6A12_2435 PF18319 PriA DNA helicase Cys-rich region (CRR) domain A6A12_2437 PF01197 Ribosomal protein L31 A6A12_2438 PF00390 Malic enzyme, N-terminal domain A6A12_2438 PF03949 Malic enzyme, NAD binding domain A6A12_2439 PF01340 Met Apo-repressor, MetJ A6A12_2440 PF01053 Cys/Met metabolism PLP-dependent enzyme A6A12_2441 PF00696 Amino acid kinase family A6A12_2441 PF00742 Homoserine dehydrogenase A6A12_2441 PF03447 Homoserine dehydrogenase, NAD binding domain A6A12_2442 PF02219 Methylenetetrahydrofolate reductase A6A12_2443 PF02219 Methylenetetrahydrofolate reductase A6A12_2445 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded A6A12_2446 PF00365 Phosphofructokinase A6A12_2447 PF16916 Dimerisation domain of Zinc Transporter A6A12_2447 PF01545 Cation efflux family A6A12_2449 PF00072 Response regulator receiver domain A6A12_2449 PF00486 Transcriptional regulatory protein, C terminal A6A12_2450 PF00512 His Kinase A (phospho-acceptor) domain A6A12_2450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6A12_2450 PF00672 HAMP domain A6A12_2450 PF16527 Two-component sensor protein CpxA, periplasmic domain A6A12_2451 PF00588 SpoU rRNA Methylase family A6A12_2452 PF00313 'Cold-shock' DNA-binding domain A6A12_2453 PF04186 FxsA cytoplasmic membrane protein A6A12_2455 PF10415 Fumarase C C-terminus A6A12_2455 PF00206 Lyase A6A12_2456 PF03605 Anaerobic c4-dicarboxylate membrane transporter A6A12_2457 PF03606 C4-dicarboxylate anaerobic carrier A6A12_2459 PF00696 Amino acid kinase family A6A12_2460 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain A6A12_2460 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain A6A12_2461 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain A6A12_2461 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain A6A12_2462 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain A6A12_2462 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain A6A12_2464 PF01316 Arginine repressor, DNA binding domain A6A12_2464 PF02863 Arginine repressor, C-terminal domain A6A12_2465 PF11412 Disulphide bond corrector protein DsbC A6A12_2465 PF02683 Cytochrome C biogenesis protein transmembrane region A6A12_2466 PF00072 Response regulator receiver domain A6A12_2466 PF00196 Bacterial regulatory proteins, luxR family A6A12_2467 PF00999 Sodium/hydrogen exchanger family A6A12_2467 PF03471 Transporter associated domain A6A12_2467 PF02080 TrkA-C domain A6A12_2469 PF00474 Sodium:solute symporter family A6A12_2470 PF00072 Response regulator receiver domain A6A12_2470 PF00672 HAMP domain A6A12_2470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6A12_2470 PF01627 Hpt domain A6A12_2470 PF00512 His Kinase A (phospho-acceptor) domain A6A12_2471 PF12832 MFS_1 like family A6A12_2474 PF16177 Acetyl-coenzyme A synthetase N-terminus A6A12_2474 PF00501 AMP-binding enzyme A6A12_2474 PF13193 AMP-binding enzyme C-terminal domain A6A12_2475 PF01220 Dehydroquinase class II A6A12_2476 PF00364 Biotin-requiring enzyme A6A12_2477 PF02785 Biotin carboxylase C-terminal domain A6A12_2477 PF00289 Biotin carboxylase, N-terminal domain A6A12_2477 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A6A12_2480 PF01207 Dihydrouridine synthase (Dus) A6A12_2481 PF02954 Bacterial regulatory protein, Fis family A6A12_2483 PF17200 Single Cache domain 2 A6A12_2483 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6A12_2483 PF00672 HAMP domain A6A12_2484 PF13426 PAS domain A6A12_2484 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6A12_2484 PF00672 HAMP domain A6A12_2485 PF13411 MerR HTH family regulatory protein A6A12_2486 PF02142 MGS-like domain A6A12_2486 PF01808 AICARFT/IMPCHase bienzyme A6A12_2487 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain A6A12_2487 PF02843 Phosphoribosylglycinamide synthetase, C domain A6A12_2487 PF02844 Phosphoribosylglycinamide synthetase, N domain A6A12_2489 PF00216 Bacterial DNA-binding protein A6A12_2490 PF01595 Cyclin M transmembrane N-terminal domain A6A12_2490 PF00571 CBS domain A6A12_2491 PF04480 Protein of unknown function (DUF559) A6A12_2492 PF04222 Protein of unknown function (DUF416) A6A12_2494 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A6A12_2495 PF00924 Mechanosensitive ion channel A6A12_2496 PF00672 HAMP domain A6A12_2496 PF02743 Cache domain A6A12_2496 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A6A12_2497 PF10996 Beta-Casp domain A6A12_2497 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain A6A12_2497 PF00753 Metallo-beta-lactamase superfamily A6A12_2499 PF00953 Glycosyl transferase family 4 A6A12_2500 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain A6A12_2500 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain A6A12_2500 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain A6A12_2501 PF01370 NAD dependent epimerase/dehydratase family A6A12_2502 PF00534 Glycosyl transferases group 1 A6A12_2502 PF13439 Glycosyltransferase Family 4 A6A12_2508 PF02706 Chain length determinant protein A6A12_2508 PF13614 AAA domain A6A12_2508 PF13807 G-rich domain on putative tyrosine kinase A6A12_2509 PF01451 Low molecular weight phosphotyrosine protein phosphatase A6A12_2510 PF10531 SLBB domain A6A12_2510 PF18412 Outer-membrane lipoprotein Wza C-terminal domain A6A12_2510 PF02563 Polysaccharide biosynthesis/export protein A6A12_2512 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF A6A12_2515 PF06082 Exopolysaccharide biosynthesis protein YbjH A6A12_2517 PF02397 Bacterial sugar transferase A6A12_2518 PF01370 NAD dependent epimerase/dehydratase family A6A12_2519 PF02719 Polysaccharide biosynthesis protein A6A12_2521 PF00535 Glycosyl transferase family 2 A6A12_2522 PF05045 Rhamnan synthesis protein F A6A12_2523 PF00535 Glycosyl transferase family 2 A6A12_2524 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family A6A12_2525 PF00132 Bacterial transferase hexapeptide (six repeats) A6A12_2526 PF05523 WxcM-like, C-terminal A6A12_2528 PF00535 Glycosyl transferase family 2 A6A12_2529 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family A6A12_2531 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A6A12_2531 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A6A12_2531 PF00205 Thiamine pyrophosphate enzyme, central domain A6A12_2532 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family A6A12_2533 PF16363 GDP-mannose 4,6 dehydratase A6A12_2534 PF00483 Nucleotidyl transferase A6A12_2535 PF00175 Oxidoreductase NAD-binding domain A6A12_2535 PF00111 2Fe-2S iron-sulfur cluster binding domain A6A12_2535 PF00970 Oxidoreductase FAD-binding domain A6A12_2538 PF13808 DDE_Tnp_1-associated A6A12_2538 PF01609 Transposase DDE domain A6A12_2539 PF13808 DDE_Tnp_1-associated A6A12_2539 PF01609 Transposase DDE domain A6A12_2541 PF00005 ABC transporter A6A12_2542 PF01061 ABC-2 type transporter A6A12_2543 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase A6A12_2544 PF04321 RmlD substrate binding domain A6A12_2545 PF00483 Nucleotidyl transferase A6A12_2546 PF16363 GDP-mannose 4,6 dehydratase A6A12_2547 PF01370 NAD dependent epimerase/dehydratase family A6A12_2549 PF04932 O-Antigen ligase A6A12_2550 PF01075 Glycosyltransferase family 9 (heptosyltransferase) A6A12_2552 PF04488 Glycosyltransferase sugar-binding region containing DXD motif A6A12_2553 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) A6A12_2554 PF00132 Bacterial transferase hexapeptide (six repeats) A6A12_2555 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family A6A12_2559 PF01075 Glycosyltransferase family 9 (heptosyltransferase) A6A12_2560 PF00535 Glycosyl transferase family 2 A6A12_2561 PF01075 Glycosyltransferase family 9 (heptosyltransferase) A6A12_2562 PF01467 Cytidylyltransferase-like A6A12_2563 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain A6A12_2563 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain A6A12_2563 PF06827 Zinc finger found in FPG and IleRS A6A12_2565 PF00471 Ribosomal protein L33 A6A12_2567 PF04002 RadC-like JAB domain A6A12_2568 PF02441 Flavoprotein A6A12_2568 PF04127 DNA / pantothenate metabolism flavoprotein A6A12_2569 PF00440 Bacterial regulatory proteins, tetR family A6A12_2570 PF03279 Bacterial lipid A biosynthesis acyltransferase A6A12_2571 PF03279 Bacterial lipid A biosynthesis acyltransferase A6A12_2573 PF01138 3' exoribonuclease family, domain 1 A6A12_2573 PF03725 3' exoribonuclease family, domain 2 A6A12_2574 PF08340 Domain of unknown function (DUF1732) A6A12_2574 PF03755 YicC-like family, N-terminal region A6A12_2577 PF00665 Integrase core domain A6A12_2578 PF01527 Transposase A6A12_2591 PF13005 zinc-finger binding domain of transposase IS66 A6A12_2591 PF13817 IS66 C-terminal element A6A12_2591 PF03050 Transposase IS66 family A6A12_2591 PF13007 Transposase C of IS166 homeodomain A6A12_2597 PF13333 Integrase core domain A6A12_2597 PF00665 Integrase core domain A6A12_2597 PF13276 HTH-like domain A6A12_2598 PF13005 zinc-finger binding domain of transposase IS66 A6A12_2598 PF13817 IS66 C-terminal element A6A12_2598 PF13007 Transposase C of IS166 homeodomain A6A12_2598 PF03050 Transposase IS66 family A6A12_2602 PF01527 Transposase A6A12_2605 PF05193 Peptidase M16 inactive domain A6A12_2605 PF00675 Insulinase (Peptidase family M16) A6A12_2606 PF13737 Transposase DDE domain A6A12_2607 PF03350 Uncharacterized protein family, UPF0114 A6A12_2608 PF03350 Uncharacterized protein family, UPF0114 A6A12_2609 PF01032 FecCD transport family A6A12_2610 PF01497 Periplasmic binding protein A6A12_2611 PF00005 ABC transporter A6A12_2612 PF00593 TonB dependent receptor A6A12_2612 PF07715 TonB-dependent Receptor Plug Domain A6A12_2613 PF00005 ABC transporter A6A12_2613 PF00664 ABC transporter transmembrane region A6A12_2614 PF02378 Phosphotransferase system, EIIC A6A12_2614 PF00367 phosphotransferase system, EIIB A6A12_2615 PF01380 SIS domain A6A12_2616 PF01418 Helix-turn-helix domain, rpiR family A6A12_2616 PF01380 SIS domain A6A12_2619 PF00271 Helicase conserved C-terminal domain A6A12_2619 PF00570 HRDC domain A6A12_2619 PF16124 RecQ zinc-binding A6A12_2619 PF00270 DEAD/DEAH box helicase A6A12_2619 PF09382 RQC domain A6A12_2620 PF00892 EamA-like transporter family A6A12_2622 PF01810 LysE type translocator A6A12_2623 PF13361 UvrD-like helicase C-terminal domain A6A12_2623 PF00580 UvrD/REP helicase N-terminal domain A6A12_2624 PF01432 Peptidase family M3 A6A12_2625 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ A6A12_2626 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A6A12_2626 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6A12_2630 PF13737 Transposase DDE domain A6A12_2633 PF07693 KAP family P-loop domain A6A12_2635 PF13005 zinc-finger binding domain of transposase IS66 A6A12_2635 PF13007 Transposase C of IS166 homeodomain A6A12_2635 PF13817 IS66 C-terminal element A6A12_2635 PF03050 Transposase IS66 family A6A12_2640 PF04245 37-kD nucleoid-associated bacterial protein A6A12_2644 PF13005 zinc-finger binding domain of transposase IS66 A6A12_2644 PF13007 Transposase C of IS166 homeodomain A6A12_2644 PF13817 IS66 C-terminal element A6A12_2644 PF03050 Transposase IS66 family A6A12_2653 PF00072 Response regulator receiver domain A6A12_2656 PF12911 N-terminal TM domain of oligopeptide transport permease C A6A12_2656 PF00528 Binding-protein-dependent transport system inner membrane component A6A12_2658 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A6A12_2659 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A6A12_2659 PF00005 ABC transporter A6A12_2668 PF13442 Cytochrome C oxidase, cbb3-type, subunit III A6A12_2669 PF00580 UvrD/REP helicase N-terminal domain A6A12_2669 PF13361 UvrD-like helicase C-terminal domain A6A12_2670 PF00440 Bacterial regulatory proteins, tetR family A6A12_2670 PF08359 YsiA-like protein, C-terminal region A6A12_2671 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A6A12_2672 PF00873 AcrB/AcrD/AcrF family A6A12_2673 PF04380 Membrane fusogenic activity A6A12_2674 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain A6A12_2674 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain A6A12_2675 PF03466 LysR substrate binding domain A6A12_2675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6A12_2676 PF04055 Radical SAM superfamily A6A12_2676 PF06969 HemN C-terminal domain A6A12_2677 PF10675 Protein of unknown function (DUF2489) A6A12_2678 PF04220 Der GTPase activator (YihI) A6A12_2680 PF00034 Cytochrome c A6A12_2681 PF01926 50S ribosome-binding GTPase A6A12_2682 PF01367 5'-3' exonuclease, C-terminal SAM fold A6A12_2682 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain A6A12_2682 PF00476 DNA polymerase family A A6A12_2682 PF01612 3'-5' exonuclease A6A12_2684 PF00490 Delta-aminolevulinic acid dehydratase A6A12_2685 PF01026 TatD related DNase A6A12_2686 PF00902 Sec-independent protein translocase protein (TatC) A6A12_2687 PF02416 mttA/Hcf106 family A6A12_2688 PF02416 mttA/Hcf106 family A6A12_2689 PF03109 ABC1 family A6A12_2690 PF02036 SCP-2 sterol transfer family A6A12_2691 PF01209 ubiE/COQ5 methyltransferase family A6A12_2692 PF02646 RmuC family A6A12_2694 PF12833 Helix-turn-helix domain A6A12_2694 PF02311 AraC-like ligand binding domain A6A12_2696 PF02610 L-arabinose isomerase A6A12_2696 PF11762 L-arabinose isomerase C-terminal domain A6A12_2697 PF00596 Class II Aldolase and Adducin N-terminal domain A6A12_2698 PF00370 FGGY family of carbohydrate kinases, N-terminal domain A6A12_2698 PF02782 FGGY family of carbohydrate kinases, C-terminal domain A6A12_2699 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family A6A12_2700 PF00005 ABC transporter A6A12_2701 PF02653 Branched-chain amino acid transport system / permease component A6A12_2702 PF06414 Zeta toxin A6A12_2706 PF10625 Universal stress protein B (UspB) A6A12_2707 PF00210 Ferritin-like domain A6A12_2708 PF00582 Universal stress protein family A6A12_2709 PF00892 EamA-like transporter family A6A12_2711 PF04445 Putative SAM-dependent methyltransferase A6A12_2712 PF01037 Lrp/AsnC ligand binding domain A6A12_2714 PF13737 Transposase DDE domain A6A12_2715 PF07690 Major Facilitator Superfamily A6A12_2716 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6A12_2716 PF03466 LysR substrate binding domain A6A12_2717 PF01321 Creatinase/Prolidase N-terminal domain A6A12_2717 PF01321 Creatinase/Prolidase N-terminal domain A6A12_2717 PF00557 Metallopeptidase family M24 A6A12_2717 PF00557 Metallopeptidase family M24 A6A12_2718 PF04055 Radical SAM superfamily A6A12_2718 PF06968 Biotin and Thiamin Synthesis associated domain A6A12_2719 PF05690 Thiazole biosynthesis protein ThiG A6A12_2720 PF02597 ThiS family A6A12_2721 PF00899 ThiF family A6A12_2722 PF02581 Thiamine monophosphate synthase A6A12_2723 PF01964 Radical SAM ThiC family A6A12_2723 PF13667 ThiC-associated domain A6A12_2724 PF02537 CrcB-like protein, Camphor Resistance (CrcB) A6A12_2736 PF12724 Flavodoxin domain A6A12_2737 PF02386 Cation transport protein A6A12_2738 PF01205 Uncharacterized protein family UPF0029 A6A12_2738 PF09186 Domain of unknown function (DUF1949) A6A12_2739 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain A6A12_2739 PF00378 Enoyl-CoA hydratase/isomerase A6A12_2739 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain A6A12_2740 PF00108 Thiolase, N-terminal domain A6A12_2740 PF02803 Thiolase, C-terminal domain A6A12_2741 PF03466 LysR substrate binding domain A6A12_2741 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6A12_2742 PF07690 Major Facilitator Superfamily A6A12_2743 PF12804 MobA-like NTP transferase domain A6A12_2743 PF14602 Hexapeptide repeat of succinyl-transferase A6A12_2743 PF00132 Bacterial transferase hexapeptide (six repeats) A6A12_2744 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain A6A12_2744 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain A6A12_2745 PF02874 ATP synthase alpha/beta family, beta-barrel domain A6A12_2745 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A6A12_2746 PF00231 ATP synthase A6A12_2747 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A6A12_2747 PF02874 ATP synthase alpha/beta family, beta-barrel domain A6A12_2747 PF00306 ATP synthase alpha/beta chain, C terminal domain A6A12_2748 PF00213 ATP synthase delta (OSCP) subunit A6A12_2749 PF00430 ATP synthase B/B' CF(0) A6A12_2750 PF00137 ATP synthase subunit C A6A12_2751 PF00119 ATP synthase A chain A6A12_2752 PF03899 ATP synthase I chain A6A12_2753 PF02195 ParB-like nuclease domain A6A12_2753 PF17762 HTH domain found in ParB protein A6A12_2754 PF13614 AAA domain A6A12_2755 PF02527 rRNA small subunit methyltransferase G A6A12_2756 PF13932 GidA associated domain A6A12_2756 PF01134 Glucose inhibited division protein A A6A12_2757 PF00258 Flavodoxin A6A12_2758 PF01926 50S ribosome-binding GTPase A6A12_2758 PF10396 GTP-binding protein TrmE N-terminus A6A12_2758 PF12631 MnmE helical domain A6A12_2759 PF14849 YidC periplasmic domain A6A12_2759 PF02096 60Kd inner membrane protein A6A12_2760 PF00825 Ribonuclease P A6A12_2761 PF00468 Ribosomal protein L34 A6A12_2762 PF00005 ABC transporter A6A12_2763 PF00528 Binding-protein-dependent transport system inner membrane component A6A12_2764 PF00497 Bacterial extracellular solute-binding proteins, family 3 A6A12_2765 PF00308 Bacterial dnaA protein A6A12_2765 PF11638 DnaA N-terminal domain A6A12_2765 PF08299 Bacterial dnaA protein helix-turn-helix A6A12_2766 PF02767 DNA polymerase III beta subunit, central domain A6A12_2766 PF00712 DNA polymerase III beta subunit, N-terminal domain A6A12_2766 PF02768 DNA polymerase III beta subunit, C-terminal domain A6A12_2767 PF02463 RecF/RecN/SMC N terminal domain A6A12_2768 PF00204 DNA gyrase B A6A12_2768 PF00986 DNA gyrase B subunit, carboxyl terminus A6A12_2768 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6A12_2768 PF18053 DNA gyrase B subunit insert domain A6A12_2768 PF01751 Toprim domain A6A12_2771 PF00011 Hsp20/alpha crystallin family A6A12_2772 PF00155 Aminotransferase class I and II A6A12_2773 PF05746 DALR anticodon binding domain A6A12_2773 PF02092 Glycyl-tRNA synthetase beta subunit A6A12_2774 PF02091 Glycyl-tRNA synthetase alpha subunit A6A12_2775 PF01169 Uncharacterized protein family UPF0016 A6A12_2777 PF01206 Sulfurtransferase TusA A6A12_2780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6A12_2780 PF03466 LysR substrate binding domain A6A12_2781 PF08240 Alcohol dehydrogenase GroES-like domain A6A12_2781 PF00107 Zinc-binding dehydrogenase A6A12_2782 PF00585 C-terminal regulatory domain of Threonine dehydratase A6A12_2782 PF00291 Pyridoxal-phosphate dependent enzyme A6A12_2783 PF00920 Dehydratase family A6A12_2784 PF01063 Amino-transferase class IV A6A12_2786 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A6A12_2786 PF00205 Thiamine pyrophosphate enzyme, central domain A6A12_2786 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A6A12_2787 PF01078 Magnesium chelatase, subunit ChlI A6A12_2787 PF13335 Magnesium chelatase, subunit ChlI C-terminal A6A12_2801 PF13817 IS66 C-terminal element A6A12_2801 PF13005 zinc-finger binding domain of transposase IS66 A6A12_2801 PF13007 Transposase C of IS166 homeodomain A6A12_2801 PF03050 Transposase IS66 family A6A12_2804 PF01078 Magnesium chelatase, subunit ChlI A6A12_2804 PF13335 Magnesium chelatase, subunit ChlI C-terminal A6A12_2806 PF01323 DSBA-like thioredoxin domain A6A12_2807 PF01636 Phosphotransferase enzyme family A6A12_2808 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase A6A12_2808 PF13746 4Fe-4S dicluster domain A6A12_2808 PF12801 4Fe-4S binding domain A6A12_2809 PF06288 Protein of unknown function (DUF1040) A6A12_2811 PF03006 Haemolysin-III related A6A12_2813 PF02386 Cation transport protein A6A12_2814 PF02080 TrkA-C domain A6A12_2814 PF02254 TrkA-N domain A6A12_2815 PF01189 16S rRNA methyltransferase RsmB/F A6A12_2815 PF01029 NusB family A6A12_2816 PF00551 Formyl transferase A6A12_2816 PF02911 Formyl transferase, C-terminal domain A6A12_2817 PF01327 Polypeptide deformylase A6A12_2818 PF01476 LysM domain A6A12_2819 PF17782 DprA winged helix domain A6A12_2819 PF02481 DNA recombination-mediator protein A A6A12_2820 PF04361 Protein of unknown function (DUF494) A6A12_2821 PF01396 Topoisomerase DNA binding C4 zinc finger A6A12_2823 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain A6A12_2823 PF02222 ATP-grasp domain A6A12_2824 PF00731 AIR carboxylase A6A12_2825 PF01300 Telomere recombination A6A12_2826 PF01218 Coproporphyrinogen III oxidase A6A12_2827 PF01488 Shikimate / quinate 5-dehydrogenase A6A12_2827 PF18317 Shikimate 5'-dehydrogenase C-terminal domain A6A12_2827 PF08501 Shikimate dehydrogenase substrate binding domain A6A12_2828 PF07369 Protein of unknown function (DUF1488) A6A12_2829 PF00132 Bacterial transferase hexapeptide (six repeats) A6A12_2840 PF07219 HemY protein N-terminus A6A12_2841 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase A6A12_2842 PF02602 Uroporphyrinogen-III synthase HemD A6A12_2843 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain A6A12_2843 PF03900 Porphobilinogen deaminase, C-terminal domain A6A12_2844 PF01295 Adenylate cyclase, class-I A6A12_2844 PF12633 Adenylate cyclase NT domain A6A12_2845 PF01491 Frataxin-like domain A6A12_2847 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain A6A12_2847 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain A6A12_2848 PF01678 Diaminopimelate epimerase A6A12_2850 PF02899 Phage integrase, N-terminal SAM-like domain A6A12_2850 PF00589 Phage integrase family A6A12_2851 PF13419 Haloacid dehalogenase-like hydrolase A6A12_2856 PF12146 Serine aminopeptidase, S33 A6A12_2857 PF01810 LysE type translocator A6A12_2858 PF08668 HDOD domain A6A12_2858 PF00563 EAL domain A6A12_2859 PF00210 Ferritin-like domain A6A12_2864 PF01914 MarC family integral membrane protein A6A12_2866 PF13007 Transposase C of IS166 homeodomain A6A12_2866 PF13817 IS66 C-terminal element A6A12_2866 PF03050 Transposase IS66 family A6A12_2866 PF13005 zinc-finger binding domain of transposase IS66 A6A12_2871 PF13737 Transposase DDE domain A6A12_2873 PF01914 MarC family integral membrane protein A6A12_2876 PF02881 SRP54-type protein, helical bundle domain A6A12_2876 PF00448 SRP54-type protein, GTPase domain A6A12_2877 PF00005 ABC transporter A6A12_2878 PF18075 FtsX extracellular domain A6A12_2879 PF04542 Sigma-70 region 2 A6A12_2879 PF04545 Sigma-70, region 4 A6A12_2879 PF00140 Sigma-70 factor, region 1.2 A6A12_2880 PF00581 Rhodanese-like domain A6A12_2881 PF01694 Rhomboid family A6A12_2881 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease A6A12_2882 PF03748 Flagellar basal body-associated protein FliL A6A12_2883 PF04345 Chorismate lyase A6A12_2884 PF01040 UbiA prenyltransferase family A6A12_2885 PF01553 Acyltransferase A6A12_2886 PF01726 LexA DNA binding domain A6A12_2886 PF00717 Peptidase S24-like A6A12_2888 PF01554 MatE A6A12_2891 PF00440 Bacterial regulatory proteins, tetR family A6A12_2892 PF07226 Protein of unknown function (DUF1422) A6A12_2893 PF02837 Glycosyl hydrolases family 2, sugar binding domain A6A12_2893 PF02836 Glycosyl hydrolases family 2, TIM barrel domain A6A12_2893 PF00703 Glycosyl hydrolases family 2 A6A12_2893 PF16353 Domain of unknown function(DUF4981) A6A12_2893 PF02929 Beta galactosidase small chain A6A12_2896 PF05958 tRNA (Uracil-5-)-methyltransferase A6A12_2901 PF02796 Helix-turn-helix domain of resolvase A6A12_2901 PF00239 Resolvase, N terminal domain A6A12_2908 PF07804 HipA-like C-terminal domain A6A12_2908 PF13657 HipA N-terminal domain A6A12_2910 PF01381 Helix-turn-helix A6A12_2915 PF07715 TonB-dependent Receptor Plug Domain A6A12_2915 PF00593 TonB dependent receptor A6A12_2917 PF01177 Asp/Glu/Hydantoin racemase A6A12_2929 PF00962 Adenosine/AMP deaminase A6A12_2930 PF03707 Bacterial signalling protein N terminal repeat A6A12_2930 PF00563 EAL domain A6A12_2930 PF13188 PAS domain A6A12_2930 PF00990 Diguanylate cyclase, GGDEF domain A6A12_2932 PF02954 Bacterial regulatory protein, Fis family A6A12_2932 PF00072 Response regulator receiver domain A6A12_2932 PF00158 Sigma-54 interaction domain A6A12_2933 PF00512 His Kinase A (phospho-acceptor) domain A6A12_2933 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6A12_2933 PF00989 PAS fold A6A12_2936 PF03951 Glutamine synthetase, beta-Grasp domain A6A12_2936 PF00120 Glutamine synthetase, catalytic domain A6A12_2938 PF03631 Virulence factor BrkB A6A12_2939 PF02580 D-Tyr-tRNA(Tyr) deacylase A6A12_2940 PF09500 Putative thioesterase (yiiD_Cterm) A6A12_2940 PF00583 Acetyltransferase (GNAT) family A6A12_2942 PF01293 Phosphoenolpyruvate carboxykinase A6A12_2944 PF01430 Hsp33 protein A6A12_2945 PF01479 S4 domain A6A12_2946 PF11356 Type II secretion system protein C A6A12_2947 PF00263 Bacterial type II and III secretion system protein A6A12_2947 PF03958 Bacterial type II/III secretion system short domain A6A12_2948 PF00437 Type II/IV secretion system protein A6A12_2949 PF00482 Type II secretion system (T2SS), protein F A6A12_2950 PF08334 Type II secretion system (T2SS), protein G A6A12_2950 PF07963 Prokaryotic N-terminal methylation motif A6A12_2951 PF12019 Type II transport protein GspH A6A12_2952 PF02501 Type II secretion system (T2SS), protein I A6A12_2952 PF07963 Prokaryotic N-terminal methylation motif A6A12_2953 PF11612 Type II secretion system (T2SS), protein J A6A12_2953 PF07963 Prokaryotic N-terminal methylation motif A6A12_2954 PF03934 Type II secretion system (T2SS), protein K A6A12_2955 PF12693 GspL periplasmic domain A6A12_2955 PF05134 Type II secretion system (T2SS), protein L A6A12_2956 PF04612 Type II secretion system (T2SS), protein M A6A12_2958 PF01203 Type II secretion system (T2SS), protein N A6A12_2959 PF00459 Inositol monophosphatase family A6A12_2960 PF00293 NUDIX domain A6A12_2961 PF01106 NifU-like domain A6A12_2961 PF01521 Iron-sulphur cluster biosynthesis A6A12_2962 PF00156 Phosphoribosyl transferase domain A6A12_2963 PF00561 alpha/beta hydrolase fold A6A12_2965 PF00575 S1 RNA binding domain A6A12_2965 PF09371 Tex-like protein N-terminal domain A6A12_2965 PF17674 HHH domain A6A12_2965 PF16921 Tex protein YqgF-like domain A6A12_2966 PF03449 Transcription elongation factor, N-terminal A6A12_2966 PF01272 Transcription elongation factor, GreA/GreB, C-term A6A12_2969 PF06942 GlpM protein A6A12_2971 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6A12_2971 PF03466 LysR substrate binding domain A6A12_2973 PF00881 Nitroreductase family A6A12_2975 PF00704 Glycosyl hydrolases family 18 A6A12_2975 PF06483 Chitinase C A6A12_2976 PF00072 Response regulator receiver domain A6A12_2976 PF00486 Transcriptional regulatory protein, C terminal A6A12_2977 PF00512 His Kinase A (phospho-acceptor) domain A6A12_2977 PF00672 HAMP domain A6A12_2977 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6A12_2978 PF00860 Permease family A6A12_2979 PF17191 RecG wedge domain A6A12_2979 PF00271 Helicase conserved C-terminal domain A6A12_2979 PF00270 DEAD/DEAH box helicase A6A12_2980 PF04607 Region found in RelA / SpoT proteins A6A12_2980 PF13291 ACT domain A6A12_2980 PF02824 TGS domain A6A12_2981 PF01192 RNA polymerase Rpb6 A6A12_2982 PF00625 Guanylate kinase A6A12_2983 PF02592 Putative vitamin uptake transporter A6A12_2984 PF02541 Ppx/GppA phosphatase family A6A12_2985 PF00270 DEAD/DEAH box helicase A6A12_2985 PF00271 Helicase conserved C-terminal domain A6A12_2986 PF00085 Thioredoxin A6A12_2987 PF07498 Rho termination factor, N-terminal domain A6A12_2987 PF07497 Rho termination factor, RNA-binding domain A6A12_2987 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A6A12_2989 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase A6A12_2990 PF00111 2Fe-2S iron-sulfur cluster binding domain A6A12_2990 PF00970 Oxidoreductase FAD-binding domain A6A12_2990 PF00175 Oxidoreductase NAD-binding domain A6A12_2991 PF00175 Oxidoreductase NAD-binding domain A6A12_3002 PF13091 PLD-like domain A6A12_3005 PF01565 FAD binding domain A6A12_3005 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain A6A12_3006 PF03099 Biotin/lipoate A/B protein ligase family A6A12_3006 PF08279 HTH domain A6A12_3006 PF02237 Biotin protein ligase C terminal domain A6A12_3007 PF00485 Phosphoribulokinase / Uridine kinase family