A6A12_0003 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. A6A12_0003 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A6A12_0004 SM00649 Ribosomal protein L11/L12 A6A12_0009 SM00663 RNA polymerase I subunit A N-terminus A6A12_0019 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A6A12_0019 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A6A12_0023 SM00479 A6A12_0023 A6A12_0028 SM00257 Lysin motif A6A12_0028 SM00646 A6A12_0028 A6A12_0029 SM00853 MutL C terminal dimerisation domain A6A12_0029 SM01340 A6A12_0029 A6A12_0033 SM00244 prohibitin homologues A6A12_0034 SM00244 prohibitin homologues A6A12_0037 SM00320 WD40 repeats A6A12_0045 SM00838 Elongation factor G C-terminus A6A12_0045 SM00889 Elongation factor G, domain IV A6A12_0052 SM00382 ATPases associated with a variety of cellular activities A6A12_0053 SM01005 Alanine racemase, C-terminal domain A6A12_0079 SM01018 B12 binding domain A6A12_0085 SM00116 Domain in cystathionine beta-synthase and other proteins. A6A12_0085 SM00924 MgtE intracellular N domain A6A12_0089 SM00421 helix_turn_helix, Lux Regulon A6A12_0091 SM00052 Putative diguanylate phosphodiesterase A6A12_0091 SM00267 diguanylate cyclase A6A12_0095 SM00965 Secretin and TonB N terminus short domain A6A12_0097 SM00028 Tetratricopeptide repeats A6A12_0098 SM00382 ATPases associated with a variety of cellular activities A6A12_0107 SM00560 LamG-like jellyroll fold domain A6A12_0112 SM00316 Ribosomal protein S1-like RNA-binding domain A6A12_0136 SM00650 Ribosomal RNA adenine dimethylases A6A12_0140 SM00271 DnaJ molecular chaperone homology domain A6A12_0153 SM00478 endonuclease III A6A12_0153 SM00525 A6A12_0153 A6A12_0156 SM00729 Elongator protein 3, MiaB family, Radical SAM A6A12_0159 SM01152 A6A12_0159 A6A12_0165 SM00732 Likely ribonuclease with RNase H fold. A6A12_0170 SM00731 SprT homologues. A6A12_0173 SM00861 Transketolase, pyrimidine binding domain A6A12_0177 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A6A12_0185 SM00267 diguanylate cyclase A6A12_0188 SM00420 helix_turn_helix, Deoxyribose operon repressor A6A12_0188 SM01134 A6A12_0188 A6A12_0191 SM00635 Bacterial Ig-like domain 2 A6A12_0192 SM00563 Phosphate acyltransferases A6A12_0200 SM00886 Stress responsive A/B Barrel Domain A6A12_0206 SM00482 DNA polymerase A domain A6A12_0213 SM00530 Helix-turn-helix XRE-family like proteins A6A12_0224 SM00382 ATPases associated with a variety of cellular activities A6A12_0228 SM00530 Helix-turn-helix XRE-family like proteins A6A12_0232 SM00857 Resolvase, N terminal domain A6A12_0245 SM00530 Helix-turn-helix XRE-family like proteins A6A12_0248 SM00400 zinc finger A6A12_0248 SM00493 A6A12_0248 A6A12_0248 SM00766 DNA primase DnaG DnaB-binding A6A12_0254 SM01207 A6A12_0254 A6A12_0255 SM00905 Dihydroneopterin aldolase A6A12_0264 SM00257 Lysin motif A6A12_0266 SM00533 DNA-binding domain of DNA mismatch repair MUTS family A6A12_0266 SM00534 ATPase domain of DNA mismatch repair MUTS family A6A12_0271 SM00382 ATPases associated with a variety of cellular activities A6A12_0273 SM00382 ATPases associated with a variety of cellular activities A6A12_0275 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A6A12_0286 SM00829 Enoylreductase A6A12_0291 SM01091 Transporter associated domain A6A12_0293 SM00382 ATPases associated with a variety of cellular activities A6A12_0293 SM00962 SRP54-type protein, GTPase domain A6A12_0293 SM00963 SRP54-type protein, helical bundle domain A6A12_0306 SM00644 A6A12_0306 A6A12_0311 SM00345 helix_turn_helix gluconate operon transcriptional repressor A6A12_0311 SM00895 A6A12_0311 A6A12_0317 SM00947 Carbonic anhydrase A6A12_0319 SM00382 ATPases associated with a variety of cellular activities A6A12_0329 SM00487 DEAD-like helicases superfamily A6A12_0329 SM00490 helicase superfamily c-terminal domain A6A12_0329 SM00847 Helicase associated domain (HA2) Add an annotation A6A12_0338 SM00938 Nitrogen regulatory protein P-II A6A12_0342 SM00382 ATPases associated with a variety of cellular activities A6A12_0344 SM01068 Putative carbohydrate binding domain A6A12_0348 SM00382 ATPases associated with a variety of cellular activities A6A12_0349 SM00382 ATPases associated with a variety of cellular activities A6A12_0353 SM00091 PAS domain A6A12_0353 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A6A12_0353 SM00387 Histidine kinase-like ATPases A6A12_0353 SM00388 His Kinase A (phosphoacceptor) domain A6A12_0353 SM00448 cheY-homologous receiver domain A6A12_0367 SM01103 A6A12_0367 A6A12_0369 SM00382 ATPases associated with a variety of cellular activities A6A12_0376 SM00316 Ribosomal protein S1-like RNA-binding domain A6A12_0376 SM00322 K homology RNA-binding domain A6A12_0380 SM01387 A6A12_0380 A6A12_0381 SM00316 Ribosomal protein S1-like RNA-binding domain A6A12_0381 SM00322 K homology RNA-binding domain A6A12_0382 SM00028 Tetratricopeptide repeats A6A12_0383 SM00347 helix_turn_helix multiple antibiotic resistance protein A6A12_0387 SM00052 Putative diguanylate phosphodiesterase A6A12_0387 SM00091 PAS domain A6A12_0387 SM00267 diguanylate cyclase A6A12_0392 SM00052 Putative diguanylate phosphodiesterase A6A12_0392 SM00267 diguanylate cyclase A6A12_0394 SM00487 DEAD-like helicases superfamily A6A12_0394 SM00490 helicase superfamily c-terminal domain A6A12_0397 SM00937 A6A12_0397 A6A12_0399 SM00382 ATPases associated with a variety of cellular activities A6A12_0403 SM00927 DNA mismatch repair enzyme MutH A6A12_0405 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A6A12_0421 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A6A12_0424 SM00904 Riboflavin kinase A6A12_0436 SM00448 cheY-homologous receiver domain A6A12_0436 SM00850 LytTr DNA-binding domain A6A12_0439 SM00830 Chorismate mutase type II A6A12_0442 SM00382 ATPases associated with a variety of cellular activities A6A12_0446 SM00052 Putative diguanylate phosphodiesterase A6A12_0446 SM00267 diguanylate cyclase A6A12_0448 SM00830 Chorismate mutase type II A6A12_0452 SM00363 S4 RNA-binding domain A6A12_0454 SM00382 ATPases associated with a variety of cellular activities A6A12_0454 SM01086 C-terminal, D2-small domain, of ClpB protein A6A12_0470 SM00448 cheY-homologous receiver domain A6A12_0470 SM00862 Transcriptional regulatory protein, C terminal A6A12_0471 SM00091 PAS domain A6A12_0471 SM00387 Histidine kinase-like ATPases A6A12_0471 SM00388 His Kinase A (phosphoacceptor) domain A6A12_0477 SM00382 ATPases associated with a variety of cellular activities A6A12_0485 SM00116 Domain in cystathionine beta-synthase and other proteins. A6A12_0488 SM01323 A6A12_0488 A6A12_0497 SM00271 DnaJ molecular chaperone homology domain A6A12_0502 SM00562 A6A12_0502 A6A12_0509 SM00564 beta-propeller repeat A6A12_0510 SM00382 ATPases associated with a variety of cellular activities A6A12_0513 SM00116 Domain in cystathionine beta-synthase and other proteins. A6A12_0513 SM01240 A6A12_0513 A6A12_0516 SM00495 Chitin-binding domain type 3 A6A12_0534 SM00490 helicase superfamily c-terminal domain A6A12_0536 SM00487 DEAD-like helicases superfamily A6A12_0547 SM00257 Lysin motif A6A12_0559 SM00487 DEAD-like helicases superfamily A6A12_0561 SM00382 ATPases associated with a variety of cellular activities A6A12_0575 SM00271 DnaJ molecular chaperone homology domain A6A12_0583 SM00829 Enoylreductase A6A12_0587 SM00062 Bacterial periplasmic substrate-binding proteins A6A12_0588 SM01211 A6A12_0588 A6A12_0605 SM00861 Transketolase, pyrimidine binding domain A6A12_0612 SM00981 A6A12_0612 A6A12_0616 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs A6A12_0616 SM00475 5'-3' exonuclease A6A12_0618 SM00267 diguanylate cyclase A6A12_0619 SM00028 Tetratricopeptide repeats A6A12_0625 SM00382 ATPases associated with a variety of cellular activities A6A12_0625 SM00930 A6A12_0625 A6A12_0628 SM00354 helix_turn _helix lactose operon repressor A6A12_0630 SM00642 Alpha-amylase domain A6A12_0631 SM00448 cheY-homologous receiver domain A6A12_0631 SM00862 Transcriptional regulatory protein, C terminal A6A12_0632 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A6A12_0632 SM00387 Histidine kinase-like ATPases A6A12_0632 SM00388 His Kinase A (phosphoacceptor) domain A6A12_0640 SM00226 Low molecular weight phosphatase family A6A12_0643 SM00984 UDP binding domain A6A12_0644 SM00984 UDP binding domain A6A12_0666 SM00729 Elongator protein 3, MiaB family, Radical SAM A6A12_0669 SM00936 Penicillin-binding protein 5, C-terminal domain A6A12_0680 SM00116 Domain in cystathionine beta-synthase and other proteins. A6A12_0680 SM01091 Transporter associated domain A6A12_0683 SM00729 Elongator protein 3, MiaB family, Radical SAM A6A12_0690 SM00771 ZipA, C-terminal domain (FtsZ-binding) A6A12_0691 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A6A12_0691 SM00292 breast cancer carboxy-terminal domain A6A12_0691 SM00532 Ligase N family A6A12_0695 SM00422 helix_turn_helix, mercury resistance A6A12_0697 SM00244 prohibitin homologues A6A12_0704 SM00862 Transcriptional regulatory protein, C terminal A6A12_0705 SM00387 Histidine kinase-like ATPases A6A12_0709 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. A6A12_0726 SM00479 A6A12_0726 A6A12_0730 SM00478 endonuclease III A6A12_0730 SM00525 A6A12_0730 A6A12_0732 SM00900 A6A12_0732 A6A12_0741 SM00923 MbtH-like protein A6A12_0744 SM00823 Phosphopantetheine attachment site A6A12_0744 SM00824 Thioesterase A6A12_0756 SM00487 DEAD-like helicases superfamily A6A12_0756 SM00490 helicase superfamily c-terminal domain A6A12_0757 SM00382 ATPases associated with a variety of cellular activities A6A12_0757 SM00448 cheY-homologous receiver domain A6A12_0760 SM00729 Elongator protein 3, MiaB family, Radical SAM A6A12_0761 SM00852 Probable molybdopterin binding domain A6A12_0765 SM00267 diguanylate cyclase A6A12_0766 SM00116 Domain in cystathionine beta-synthase and other proteins. A6A12_0784 SM00448 cheY-homologous receiver domain A6A12_0787 SM00382 ATPases associated with a variety of cellular activities A6A12_0789 SM00493 A6A12_0789 A6A12_0796 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A6A12_0800 SM00870 A6A12_0800 A6A12_0805 SM00487 DEAD-like helicases superfamily A6A12_0805 SM00491 A6A12_0805 A6A12_0811 SM00474 3'-5' exonuclease A6A12_0819 SM00495 Chitin-binding domain type 3 A6A12_0819 SM00636 A6A12_0819 A6A12_0828 SM00642 Alpha-amylase domain A6A12_0829 SM00487 DEAD-like helicases superfamily A6A12_0829 SM00490 helicase superfamily c-terminal domain A6A12_0833 SM00448 cheY-homologous receiver domain A6A12_0833 SM00862 Transcriptional regulatory protein, C terminal A6A12_0834 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A6A12_0834 SM00387 Histidine kinase-like ATPases A6A12_0839 SM00382 ATPases associated with a variety of cellular activities A6A12_0839 SM00448 cheY-homologous receiver domain A6A12_0840 SM00387 Histidine kinase-like ATPases A6A12_0840 SM00388 His Kinase A (phosphoacceptor) domain A6A12_0844 SM00382 ATPases associated with a variety of cellular activities A6A12_0844 SM00994 ClpX C4-type zinc finger A6A12_0844 SM01086 C-terminal, D2-small domain, of ClpB protein A6A12_0845 SM00382 ATPases associated with a variety of cellular activities A6A12_0845 SM00464 Found in ATP-dependent protease La (LON) A6A12_0846 SM00411 bacterial (prokaryotic) histone like domain A6A12_0850 SM00316 Ribosomal protein S1-like RNA-binding domain A6A12_0851 SM00411 bacterial (prokaryotic) histone like domain A6A12_0853 SM00028 Tetratricopeptide repeats A6A12_0854 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family A6A12_0858 SM01002 Alanine dehydrogenase/PNT, C-terminal domain A6A12_0858 SM01003 Alanine dehydrogenase/PNT, N-terminal domain A6A12_0859 SM00344 helix_turn_helix ASNC type A6A12_0860 SM00843 A6A12_0860 A6A12_0871 SM00729 Elongator protein 3, MiaB family, Radical SAM A6A12_0872 SM00020 Trypsin-like serine protease A6A12_0873 SM00052 Putative diguanylate phosphodiesterase A6A12_0873 SM00091 PAS domain A6A12_0893 SM00481 DNA polymerase alpha chain like domain A6A12_0895 SM00363 S4 RNA-binding domain A6A12_0896 SM00052 Putative diguanylate phosphodiesterase A6A12_0896 SM00267 diguanylate cyclase A6A12_0901 SM00382 ATPases associated with a variety of cellular activities A6A12_0902 SM00382 ATPases associated with a variety of cellular activities A6A12_0904 SM00267 diguanylate cyclase A6A12_0909 SM00919 Malic enzyme, NAD binding domain A6A12_0909 SM01274 A6A12_0909 A6A12_0925 SM00448 cheY-homologous receiver domain A6A12_0926 SM00387 Histidine kinase-like ATPases A6A12_0934 SM00528 Domain in histone-like proteins of HNS family A6A12_0947 SM00357 Cold shock protein domain A6A12_0951 SM00382 ATPases associated with a variety of cellular activities A6A12_0951 SM01086 C-terminal, D2-small domain, of ClpB protein A6A12_0952 SM00316 Ribosomal protein S1-like RNA-binding domain A6A12_0959 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain A6A12_0959 SM00437 Bacterial DNA topoisomerase I DNA-binding domain A6A12_0959 SM00493 A6A12_0959 A6A12_0966 SM00354 helix_turn _helix lactose operon repressor A6A12_0968 SM00448 cheY-homologous receiver domain A6A12_0968 SM00862 Transcriptional regulatory protein, C terminal A6A12_0993 SM01131 A6A12_0993 A6A12_0996 SM00382 ATPases associated with a variety of cellular activities A6A12_0997 SM00382 ATPases associated with a variety of cellular activities A6A12_1001 SM00382 ATPases associated with a variety of cellular activities A6A12_1007 SM00155 Phospholipase D. Active site motifs. A6A12_1011 SM00052 Putative diguanylate phosphodiesterase A6A12_1014 SM00382 ATPases associated with a variety of cellular activities A6A12_1024 SM00487 DEAD-like helicases superfamily A6A12_1024 SM00490 helicase superfamily c-terminal domain A6A12_1028 SM00387 Histidine kinase-like ATPases A6A12_1029 SM00448 cheY-homologous receiver domain A6A12_1029 SM00862 Transcriptional regulatory protein, C terminal A6A12_1031 SM00487 DEAD-like helicases superfamily A6A12_1031 SM00490 helicase superfamily c-terminal domain A6A12_1032 SM00363 S4 RNA-binding domain A6A12_1037 SM00382 ATPases associated with a variety of cellular activities A6A12_1044 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A6A12_1044 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A6A12_1044 SM01049 A6A12_1044 A6A12_1049 SM00852 Probable molybdopterin binding domain A6A12_1056 SM00434 DNA Topoisomerase IV A6A12_1057 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A6A12_1061 SM00764 Citrate lyase ligase C-terminal domain A6A12_1067 SM00387 Histidine kinase-like ATPases A6A12_1068 SM00448 cheY-homologous receiver domain A6A12_1079 SM00342 helix_turn_helix, arabinose operon control protein A6A12_1087 SM00382 ATPases associated with a variety of cellular activities A6A12_1092 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A6A12_1092 SM00387 Histidine kinase-like ATPases A6A12_1092 SM00388 His Kinase A (phosphoacceptor) domain A6A12_1093 SM00448 cheY-homologous receiver domain A6A12_1093 SM00862 Transcriptional regulatory protein, C terminal A6A12_1098 SM00345 helix_turn_helix gluconate operon transcriptional repressor A6A12_1098 SM00895 A6A12_1098 A6A12_1116 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase A6A12_1120 SM00382 ATPases associated with a variety of cellular activities A6A12_1123 SM00062 Bacterial periplasmic substrate-binding proteins A6A12_1125 SM00028 Tetratricopeptide repeats A6A12_1126 SM00267 diguanylate cyclase A6A12_1133 SM00316 Ribosomal protein S1-like RNA-binding domain A6A12_1137 SM00382 ATPases associated with a variety of cellular activities A6A12_1139 SM00945 ProQ/FINO family A6A12_1140 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A6A12_1140 SM00245 tail specific protease A6A12_1146 SM00981 A6A12_1146 A6A12_1148 SM00382 ATPases associated with a variety of cellular activities A6A12_1165 SM00100 Cyclic nucleotide-monophosphate binding domain A6A12_1165 SM00419 helix_turn_helix, cAMP Regulatory protein A6A12_1171 SM00382 ATPases associated with a variety of cellular activities A6A12_1178 SM00382 ATPases associated with a variety of cellular activities A6A12_1179 SM00421 helix_turn_helix, Lux Regulon A6A12_1179 SM00448 cheY-homologous receiver domain A6A12_1180 SM00387 Histidine kinase-like ATPases A6A12_1184 SM00382 ATPases associated with a variety of cellular activities A6A12_1191 SM01144 A6A12_1191 A6A12_1193 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A6A12_1207 SM00849 Metallo-beta-lactamase superfamily A6A12_1226 SM00487 DEAD-like helicases superfamily A6A12_1226 SM00490 helicase superfamily c-terminal domain A6A12_1231 SM00857 Resolvase, N terminal domain A6A12_1244 SM00479 A6A12_1244 A6A12_1245 SM00116 Domain in cystathionine beta-synthase and other proteins. A6A12_1255 SM00382 ATPases associated with a variety of cellular activities A6A12_1255 SM00487 DEAD-like helicases superfamily A6A12_1255 SM00490 helicase superfamily c-terminal domain A6A12_1255 SM00847 Helicase associated domain (HA2) Add an annotation A6A12_1258 SM00479 A6A12_1258 A6A12_1259 SM00267 diguanylate cyclase A6A12_1259 SM01079 A6A12_1259 A6A12_1269 SM00354 helix_turn _helix lactose operon repressor A6A12_1271 SM00487 DEAD-like helicases superfamily A6A12_1271 SM00490 helicase superfamily c-terminal domain A6A12_1274 SM00357 Cold shock protein domain A6A12_1277 SM00448 cheY-homologous receiver domain A6A12_1278 SM00387 Histidine kinase-like ATPases A6A12_1281 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A6A12_1281 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A6A12_1282 SM01005 Alanine racemase, C-terminal domain A6A12_1284 SM00267 diguanylate cyclase A6A12_1287 SM00091 PAS domain A6A12_1287 SM00382 ATPases associated with a variety of cellular activities A6A12_1300 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A6A12_1300 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A6A12_1303 SM00448 cheY-homologous receiver domain A6A12_1305 SM00138 Methyltransferase, chemotaxis proteins A6A12_1306 SM00260 Two component signalling adaptor domain A6A12_1307 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A6A12_1307 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A6A12_1308 SM00073 Histidine Phosphotransfer domain A6A12_1308 SM00260 Two component signalling adaptor domain A6A12_1308 SM00387 Histidine kinase-like ATPases A6A12_1308 SM01231 A6A12_1308 A6A12_1310 SM00448 cheY-homologous receiver domain A6A12_1311 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A6A12_1312 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A6A12_1314 SM00100 Cyclic nucleotide-monophosphate binding domain A6A12_1314 SM00116 Domain in cystathionine beta-synthase and other proteins. A6A12_1315 SM00479 A6A12_1315 A6A12_1316 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A6A12_1316 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A6A12_1318 SM00347 helix_turn_helix multiple antibiotic resistance protein A6A12_1321 SM00849 Metallo-beta-lactamase superfamily A6A12_1339 SM00382 ATPases associated with a variety of cellular activities A6A12_1340 SM00450 Rhodanese Homology Domain A6A12_1341 SM00062 Bacterial periplasmic substrate-binding proteins A6A12_1342 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A6A12_1342 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A6A12_1343 SM00640 Glycosyl hydrolases family 32 A6A12_1344 SM00354 helix_turn _helix lactose operon repressor A6A12_1347 SM00052 Putative diguanylate phosphodiesterase A6A12_1349 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A6A12_1349 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A6A12_1366 SM00342 helix_turn_helix, arabinose operon control protein A6A12_1367 SM00862 Transcriptional regulatory protein, C terminal A6A12_1368 SM00862 Transcriptional regulatory protein, C terminal A6A12_1372 SM00220 Serine/Threonine protein kinases, catalytic domain A6A12_1377 SM00240 Forkhead associated domain A6A12_1383 SM00382 ATPases associated with a variety of cellular activities A6A12_1383 SM01086 C-terminal, D2-small domain, of ClpB protein A6A12_1400 SM00530 Helix-turn-helix XRE-family like proteins A6A12_1403 SM00267 diguanylate cyclase A6A12_1405 SM00642 Alpha-amylase domain A6A12_1406 SM00260 Two component signalling adaptor domain A6A12_1406 SM00448 cheY-homologous receiver domain A6A12_1407 SM00062 Bacterial periplasmic substrate-binding proteins A6A12_1408 SM00448 cheY-homologous receiver domain A6A12_1409 SM00387 Histidine kinase-like ATPases A6A12_1417 SM00028 Tetratricopeptide repeats A6A12_1426 SM00382 ATPases associated with a variety of cellular activities A6A12_1429 SM00855 Phosphoglycerate mutase family A6A12_1436 SM00382 ATPases associated with a variety of cellular activities A6A12_1438 SM00382 ATPases associated with a variety of cellular activities A6A12_1439 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A6A12_1439 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A6A12_1443 SM00479 A6A12_1443 A6A12_1447 SM00052 Putative diguanylate phosphodiesterase A6A12_1447 SM00267 diguanylate cyclase A6A12_1449 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A6A12_1449 SM00091 PAS domain A6A12_1449 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A6A12_1452 SM00411 bacterial (prokaryotic) histone like domain A6A12_1453 SM00873 B3/4 domain A6A12_1453 SM00874 tRNA synthetase B5 domain A6A12_1453 SM00896 Ferredoxin-fold anticodon binding domain A6A12_1462 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A6A12_1462 SM00465 GIY-YIG type nucleases (URI domain) A6A12_1463 SM00421 helix_turn_helix, Lux Regulon A6A12_1463 SM00448 cheY-homologous receiver domain A6A12_1464 SM00486 DNA polymerase type-B family A6A12_1466 SM00841 Elongation factor P, C-terminal A6A12_1466 SM01185 A6A12_1466 A6A12_1468 SM01022 A6A12_1468 A6A12_1469 SM00345 helix_turn_helix gluconate operon transcriptional repressor A6A12_1469 SM00866 A6A12_1469 A6A12_1479 SM00671 Sel1-like repeats. A6A12_1488 SM00267 diguanylate cyclase A6A12_1545 SM00530 Helix-turn-helix XRE-family like proteins A6A12_1579 SM00387 Histidine kinase-like ATPases A6A12_1579 SM00388 His Kinase A (phosphoacceptor) domain A6A12_1579 SM00448 cheY-homologous receiver domain A6A12_1585 SM00028 Tetratricopeptide repeats A6A12_1595 SM00382 ATPases associated with a variety of cellular activities A6A12_1596 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A6A12_1598 SM00840 A6A12_1598 A6A12_1601 SM00052 Putative diguanylate phosphodiesterase A6A12_1604 SM00491 A6A12_1604 A6A12_1608 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A6A12_1608 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A6A12_1612 SM00062 Bacterial periplasmic substrate-binding proteins A6A12_1612 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. A6A12_1613 SM00382 ATPases associated with a variety of cellular activities A6A12_1618 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A6A12_1618 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A6A12_1622 SM00763 PrkA AAA domain A6A12_1629 SM00382 ATPases associated with a variety of cellular activities A6A12_1630 SM00849 Metallo-beta-lactamase superfamily A6A12_1633 SM00382 ATPases associated with a variety of cellular activities A6A12_1636 SM00487 DEAD-like helicases superfamily A6A12_1636 SM00490 helicase superfamily c-terminal domain A6A12_1636 SM00982 A6A12_1636 A6A12_1636 SM01058 CarD-like/TRCF domain A6A12_1646 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A6A12_1646 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A6A12_1648 SM00345 helix_turn_helix gluconate operon transcriptional repressor A6A12_1655 SM00729 Elongator protein 3, MiaB family, Radical SAM A6A12_1655 SM00876 Biotin and Thiamin Synthesis associated domain A6A12_1658 SM00382 ATPases associated with a variety of cellular activities A6A12_1662 SM00382 ATPases associated with a variety of cellular activities A6A12_1669 SM00382 ATPases associated with a variety of cellular activities A6A12_1670 SM00382 ATPases associated with a variety of cellular activities A6A12_1674 SM00052 Putative diguanylate phosphodiesterase A6A12_1674 SM00421 helix_turn_helix, Lux Regulon A6A12_1674 SM00448 cheY-homologous receiver domain A6A12_1675 SM00062 Bacterial periplasmic substrate-binding proteins A6A12_1675 SM00387 Histidine kinase-like ATPases A6A12_1675 SM00388 His Kinase A (phosphoacceptor) domain A6A12_1675 SM00448 cheY-homologous receiver domain A6A12_1693 SM00825 Beta-ketoacyl synthase A6A12_1695 SM00822 A6A12_1695 A6A12_1696 SM00825 Beta-ketoacyl synthase A6A12_1704 SM00354 helix_turn _helix lactose operon repressor A6A12_1707 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A6A12_1707 SM00387 Histidine kinase-like ATPases A6A12_1707 SM00388 His Kinase A (phosphoacceptor) domain A6A12_1708 SM00448 cheY-homologous receiver domain A6A12_1708 SM00862 Transcriptional regulatory protein, C terminal A6A12_1712 SM00344 helix_turn_helix ASNC type A6A12_1714 SM00387 Histidine kinase-like ATPases A6A12_1714 SM00388 His Kinase A (phosphoacceptor) domain A6A12_1715 SM00448 cheY-homologous receiver domain A6A12_1715 SM00862 Transcriptional regulatory protein, C terminal A6A12_1718 SM01236 A6A12_1718 A6A12_1723 SM00062 Bacterial periplasmic substrate-binding proteins A6A12_1723 SM00267 diguanylate cyclase A6A12_1728 SM00344 helix_turn_helix ASNC type A6A12_1730 SM00978 A6A12_1730 A6A12_1732 SM00563 Phosphate acyltransferases A6A12_1736 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A6A12_1742 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A6A12_1743 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A6A12_1744 SM01144 A6A12_1744 A6A12_1748 SM00260 Two component signalling adaptor domain A6A12_1748 SM00448 cheY-homologous receiver domain A6A12_1760 SM00825 Beta-ketoacyl synthase A6A12_1762 SM00822 A6A12_1762 A6A12_1763 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A6A12_1769 SM00363 S4 RNA-binding domain A6A12_1770 SM00316 Ribosomal protein S1-like RNA-binding domain A6A12_1775 SM00859 Semialdehyde dehydrogenase, NAD binding domain A6A12_1790 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain A6A12_1790 SM00437 Bacterial DNA topoisomerase I DNA-binding domain A6A12_1790 SM00493 A6A12_1790 A6A12_1805 SM00382 ATPases associated with a variety of cellular activities A6A12_1807 SM00260 Two component signalling adaptor domain A6A12_1808 SM00260 Two component signalling adaptor domain A6A12_1810 SM00448 cheY-homologous receiver domain A6A12_1811 SM00073 Histidine Phosphotransfer domain A6A12_1811 SM00260 Two component signalling adaptor domain A6A12_1811 SM00387 Histidine kinase-like ATPases A6A12_1811 SM01231 A6A12_1811 A6A12_1813 SM00448 cheY-homologous receiver domain A6A12_1816 SM00382 ATPases associated with a variety of cellular activities A6A12_1816 SM00962 SRP54-type protein, GTPase domain A6A12_1818 SM00855 Phosphoglycerate mutase family A6A12_1821 SM00836 DALR anticodon binding domain A6A12_1821 SM01016 Arginyl tRNA synthetase N terminal dom A6A12_1825 SM00899 A6A12_1825 A6A12_1826 SM00342 helix_turn_helix, arabinose operon control protein A6A12_1828 SM00382 ATPases associated with a variety of cellular activities A6A12_1830 SM00881 CoA binding domain A6A12_1833 SM00861 Transketolase, pyrimidine binding domain A6A12_1851 SM00859 Semialdehyde dehydrogenase, NAD binding domain A6A12_1853 SM00825 Beta-ketoacyl synthase A6A12_1863 SM00463 Small MutS-related domain A6A12_1874 SM00382 ATPases associated with a variety of cellular activities A6A12_1879 SM00382 ATPases associated with a variety of cellular activities A6A12_1879 SM00448 cheY-homologous receiver domain A6A12_1880 SM00091 PAS domain A6A12_1880 SM00387 Histidine kinase-like ATPases A6A12_1880 SM00388 His Kinase A (phosphoacceptor) domain A6A12_1881 SM00382 ATPases associated with a variety of cellular activities A6A12_1901 SM01130 A6A12_1901 A6A12_1910 SM00857 Resolvase, N terminal domain A6A12_1926 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A6A12_1926 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A6A12_1942 SM00937 A6A12_1942 A6A12_1946 SM01400 A6A12_1946 A6A12_1961 SM00047 Lysozyme subfamily 2 A6A12_1970 SM00138 Methyltransferase, chemotaxis proteins A6A12_1971 SM00260 Two component signalling adaptor domain A6A12_1971 SM00448 cheY-homologous receiver domain A6A12_1972 SM00858 A6A12_1972 A6A12_1984 SM01081 Putative carbohydrate binding domain A6A12_1989 SM00363 S4 RNA-binding domain A6A12_1997 SM00479 A6A12_1997 A6A12_2000 SM00849 Metallo-beta-lactamase superfamily A6A12_2001 SM00257 Lysin motif A6A12_2004 SM00938 Nitrogen regulatory protein P-II A6A12_2006 SM00977 TilS substrate C-terminal domain A6A12_2008 SM00481 DNA polymerase alpha chain like domain A6A12_2014 SM00935 Outer membrane protein (OmpH-like) A6A12_2016 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A6A12_2025 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A6A12_2036 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase A6A12_2047 SM00267 diguanylate cyclase A6A12_2057 SM00900 A6A12_2057 A6A12_2067 SM00464 Found in ATP-dependent protease La (LON) A6A12_2074 SM00925 MltA specific insert domain A6A12_2091 SM00354 helix_turn _helix lactose operon repressor A6A12_2101 SM00838 Elongation factor G C-terminus A6A12_2101 SM00889 Elongation factor G, domain IV A6A12_2102 SM00382 ATPases associated with a variety of cellular activities A6A12_2108 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain A6A12_2109 SM01133 A6A12_2109 A6A12_2119 SM00986 Uracil DNA glycosylase superfamily A6A12_2119 SM00987 UreE urease accessory protein, C-terminal domain A6A12_2120 SM00518 AP endonuclease family 2 A6A12_2127 SM00448 cheY-homologous receiver domain A6A12_2127 SM00862 Transcriptional regulatory protein, C terminal A6A12_2129 SM00073 Histidine Phosphotransfer domain A6A12_2129 SM00091 PAS domain A6A12_2129 SM00387 Histidine kinase-like ATPases A6A12_2129 SM00388 His Kinase A (phosphoacceptor) domain A6A12_2129 SM00448 cheY-homologous receiver domain A6A12_2130 SM00729 Elongator protein 3, MiaB family, Radical SAM A6A12_2141 SM00851 MGS-like domain A6A12_2141 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A6A12_2142 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain A6A12_2146 SM00957 SecA DEAD-like domain A6A12_2146 SM00958 SecA preprotein cross-linking domain A6A12_2149 SM00864 Tubulin/FtsZ family, GTPase domain A6A12_2149 SM00865 Tubulin/FtsZ family, C-terminal domain A6A12_2150 SM00842 Cell division protein FtsA A6A12_2167 SM00749 bacterial OsmY and nodulation domain A6A12_2177 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A6A12_2178 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A6A12_2179 SM00434 DNA Topoisomerase IV A6A12_2180 SM00387 Histidine kinase-like ATPases A6A12_2180 SM00433 TopoisomeraseII A6A12_2188 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A6A12_2190 SM00880 A6A12_2190 A6A12_2190 SM01118 A6A12_2190 A6A12_2194 SM00287 Bacterial SH3 domain homologues A6A12_2196 SM00382 ATPases associated with a variety of cellular activities A6A12_2198 SM01192 A6A12_2198 A6A12_2198 SM01193 A6A12_2198 A6A12_2201 SM00954 Region found in RelA / SpoT proteins A6A12_2203 SM00073 Histidine Phosphotransfer domain A6A12_2203 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A6A12_2203 SM00387 Histidine kinase-like ATPases A6A12_2203 SM00388 His Kinase A (phosphoacceptor) domain A6A12_2203 SM00448 cheY-homologous receiver domain A6A12_2208 SM00358 Double-stranded RNA binding motif A6A12_2208 SM00535 Ribonuclease III family A6A12_2235 SM00014 Acid phosphatase homologues A6A12_2237 SM00917 LeuA allosteric (dimerisation) domain A6A12_2238 SM01329 A6A12_2238 A6A12_2251 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A6A12_2262 SM00487 DEAD-like helicases superfamily A6A12_2262 SM00490 helicase superfamily c-terminal domain A6A12_2264 SM00670 Large family of predicted nucleotide-binding domains A6A12_2269 SM00989 A6A12_2269 A6A12_2270 SM00387 Histidine kinase-like ATPases A6A12_2271 SM00563 Phosphate acyltransferases A6A12_2278 SM00382 ATPases associated with a variety of cellular activities A6A12_2280 SM00116 Domain in cystathionine beta-synthase and other proteins. A6A12_2284 SM00382 ATPases associated with a variety of cellular activities A6A12_2290 SM00116 Domain in cystathionine beta-synthase and other proteins. A6A12_2290 SM00924 MgtE intracellular N domain A6A12_2293 SM00382 ATPases associated with a variety of cellular activities A6A12_2307 SM00382 ATPases associated with a variety of cellular activities A6A12_2322 SM00563 Phosphate acyltransferases A6A12_2323 SM00487 DEAD-like helicases superfamily A6A12_2323 SM00490 helicase superfamily c-terminal domain A6A12_2328 SM00662 RNA polymerases D A6A12_2329 SM00363 S4 RNA-binding domain A6A12_2329 SM01390 A6A12_2329 A6A12_2342 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A6A12_2343 SM01374 A6A12_2343 A6A12_2347 SM00322 K homology RNA-binding domain A6A12_2350 SM01382 A6A12_2350 A6A12_2350 SM01383 A6A12_2350 A6A12_2354 SM01403 A6A12_2354 A6A12_2355 SM00967 RNA 2'-O ribose methyltransferase substrate binding A6A12_2356 SM00316 Ribosomal protein S1-like RNA-binding domain A6A12_2356 SM00357 Cold shock protein domain A6A12_2356 SM00955 A6A12_2356 A6A12_2358 SM00671 Sel1-like repeats. A6A12_2360 SM00788 Adenylosuccinate synthetase A6A12_2366 SM00382 ATPases associated with a variety of cellular activities A6A12_2371 SM00100 Cyclic nucleotide-monophosphate binding domain A6A12_2371 SM00419 helix_turn_helix, cAMP Regulatory protein A6A12_2372 SM01150 A6A12_2372 A6A12_2390 SM00965 Secretin and TonB N terminus short domain A6A12_2403 SM00859 Semialdehyde dehydrogenase, NAD binding domain A6A12_2407 SM00971 Serine acetyltransferase, N-terminal A6A12_2410 SM00450 Rhodanese Homology Domain A6A12_2416 SM00841 Elongation factor P, C-terminal A6A12_2416 SM01185 A6A12_2416 A6A12_2422 SM00883 Chaperonin 10 Kd subunit A6A12_2431 SM00382 ATPases associated with a variety of cellular activities A6A12_2431 SM01086 C-terminal, D2-small domain, of ClpB protein A6A12_2434 SM00354 helix_turn _helix lactose operon repressor A6A12_2435 SM00487 DEAD-like helicases superfamily A6A12_2435 SM00490 helicase superfamily c-terminal domain A6A12_2438 SM00919 Malic enzyme, NAD binding domain A6A12_2438 SM01274 A6A12_2438 A6A12_2449 SM00448 cheY-homologous receiver domain A6A12_2449 SM00862 Transcriptional regulatory protein, C terminal A6A12_2450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A6A12_2450 SM00387 Histidine kinase-like ATPases A6A12_2450 SM00388 His Kinase A (phosphoacceptor) domain A6A12_2452 SM00357 Cold shock protein domain A6A12_2466 SM00421 helix_turn_helix, Lux Regulon A6A12_2466 SM00448 cheY-homologous receiver domain A6A12_2467 SM01091 Transporter associated domain A6A12_2470 SM00387 Histidine kinase-like ATPases A6A12_2470 SM00388 His Kinase A (phosphoacceptor) domain A6A12_2470 SM00448 cheY-homologous receiver domain A6A12_2473 SM00479 A6A12_2473 A6A12_2477 SM00878 Biotin carboxylase C-terminal domain A6A12_2483 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A6A12_2483 SM01049 A6A12_2483 A6A12_2484 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A6A12_2485 SM00422 helix_turn_helix, mercury resistance A6A12_2486 SM00798 AICARFT/IMPCHase bienzyme A6A12_2486 SM00851 MGS-like domain A6A12_2487 SM01209 A6A12_2487 A6A12_2487 SM01210 A6A12_2487 A6A12_2489 SM00411 bacterial (prokaryotic) histone like domain A6A12_2496 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A6A12_2496 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A6A12_2497 SM00849 Metallo-beta-lactamase superfamily A6A12_2497 SM01027 Beta-Casp domain A6A12_2500 SM00984 UDP binding domain A6A12_2509 SM00226 Low molecular weight phosphatase family A6A12_2541 SM00382 ATPases associated with a variety of cellular activities A6A12_2563 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain A6A12_2563 SM01232 A6A12_2563 A6A12_2604 SM00636 A6A12_2604 A6A12_2611 SM00382 ATPases associated with a variety of cellular activities A6A12_2613 SM00382 ATPases associated with a variety of cellular activities A6A12_2619 SM00341 Helicase and RNase D C-terminal A6A12_2619 SM00487 DEAD-like helicases superfamily A6A12_2619 SM00490 helicase superfamily c-terminal domain A6A12_2619 SM00956 A6A12_2619 A6A12_2621 SM00342 helix_turn_helix, arabinose operon control protein A6A12_2648 SM00487 DEAD-like helicases superfamily A6A12_2650 SM00530 Helix-turn-helix XRE-family like proteins A6A12_2653 SM00448 cheY-homologous receiver domain A6A12_2659 SM00382 ATPases associated with a variety of cellular activities A6A12_2676 SM00729 Elongator protein 3, MiaB family, Radical SAM A6A12_2682 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs A6A12_2682 SM00474 3'-5' exonuclease A6A12_2682 SM00475 5'-3' exonuclease A6A12_2682 SM00482 DNA polymerase A domain A6A12_2684 SM01004 Delta-aminolevulinic acid dehydratase A6A12_2694 SM00342 helix_turn_helix, arabinose operon control protein A6A12_2697 SM01007 Class II Aldolase and Adducin N-terminal domain A6A12_2700 SM00382 ATPases associated with a variety of cellular activities A6A12_2712 SM00344 helix_turn_helix ASNC type A6A12_2718 SM00876 Biotin and Thiamin Synthesis associated domain A6A12_2745 SM00382 ATPases associated with a variety of cellular activities A6A12_2753 SM00470 ParB-like nuclease domain A6A12_2756 SM01228 A6A12_2756 A6A12_2762 SM00382 ATPases associated with a variety of cellular activities A6A12_2764 SM00062 Bacterial periplasmic substrate-binding proteins A6A12_2765 SM00382 ATPases associated with a variety of cellular activities A6A12_2765 SM00760 Bacterial dnaA protein helix-turn-helix domain A6A12_2766 SM00480 DNA polymerase III beta subunit A6A12_2768 SM00387 Histidine kinase-like ATPases A6A12_2768 SM00433 TopoisomeraseII A6A12_2781 SM00829 Enoylreductase A6A12_2802 SM00487 DEAD-like helicases superfamily A6A12_2802 SM00491 A6A12_2802 A6A12_2818 SM00257 Lysin motif A6A12_2824 SM01001 AIR carboxylase A6A12_2845 SM01219 A6A12_2845 A6A12_2852 SM01144 A6A12_2852 A6A12_2858 SM00052 Putative diguanylate phosphodiesterase A6A12_2876 SM00382 ATPases associated with a variety of cellular activities A6A12_2876 SM00962 SRP54-type protein, GTPase domain A6A12_2876 SM00963 SRP54-type protein, helical bundle domain A6A12_2877 SM00382 ATPases associated with a variety of cellular activities A6A12_2880 SM00450 Rhodanese Homology Domain A6A12_2885 SM00563 Phosphate acyltransferases A6A12_2893 SM01038 Beta galactosidase small chain A6A12_2901 SM00857 Resolvase, N terminal domain A6A12_2910 SM00530 Helix-turn-helix XRE-family like proteins A6A12_2918 SM00360 RNA recognition motif A6A12_2930 SM00052 Putative diguanylate phosphodiesterase A6A12_2930 SM00267 diguanylate cyclase A6A12_2930 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A6A12_2932 SM00382 ATPases associated with a variety of cellular activities A6A12_2932 SM00448 cheY-homologous receiver domain A6A12_2933 SM00091 PAS domain A6A12_2933 SM00387 Histidine kinase-like ATPases A6A12_2933 SM00388 His Kinase A (phosphoacceptor) domain A6A12_2936 SM01230 A6A12_2936 A6A12_2945 SM00363 S4 RNA-binding domain A6A12_2948 SM00382 ATPases associated with a variety of cellular activities A6A12_2965 SM00316 Ribosomal protein S1-like RNA-binding domain A6A12_2965 SM00732 Likely ribonuclease with RNase H fold. A6A12_2975 SM00495 Chitin-binding domain type 3 A6A12_2976 SM00448 cheY-homologous receiver domain A6A12_2976 SM00862 Transcriptional regulatory protein, C terminal A6A12_2977 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A6A12_2977 SM00387 Histidine kinase-like ATPases A6A12_2977 SM00388 His Kinase A (phosphoacceptor) domain A6A12_2979 SM00487 DEAD-like helicases superfamily A6A12_2979 SM00490 helicase superfamily c-terminal domain A6A12_2980 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A6A12_2980 SM00954 Region found in RelA / SpoT proteins A6A12_2981 SM01409 A6A12_2981 A6A12_2982 SM00072 Guanylate kinase homologues. A6A12_2985 SM00487 DEAD-like helicases superfamily A6A12_2985 SM00490 helicase superfamily c-terminal domain A6A12_2987 SM00357 Cold shock protein domain A6A12_2987 SM00382 ATPases associated with a variety of cellular activities A6A12_2987 SM00959 Rho termination factor, N-terminal domain A6A12_3002 SM00155 Phospholipase D. Active site motifs.