CEG15_00020 SM01234 CEG15_00020 CEG15_00035 SM00382 ATPases associated with a variety of cellular activities CEG15_00045 SM00062 Bacterial periplasmic substrate-binding proteins CEG15_00050 SM00382 ATPases associated with a variety of cellular activities CEG15_00050 SM00760 Bacterial dnaA protein helix-turn-helix domain CEG15_00055 SM00480 DNA polymerase III beta subunit CEG15_00065 SM00387 Histidine kinase-like ATPases CEG15_00065 SM00433 TopoisomeraseII CEG15_00125 SM00829 Enoylreductase CEG15_00155 SM00382 ATPases associated with a variety of cellular activities CEG15_00230 SM00257 Lysin motif CEG15_00255 SM01001 AIR carboxylase CEG15_00315 SM00028 Tetratricopeptide repeats CEG15_00340 SM01219 CEG15_00340 CEG15_00375 SM01144 CEG15_00375 CEG15_00400 SM00052 Putative diguanylate phosphodiesterase CEG15_00430 SM01321 CEG15_00430 CEG15_00460 SM00382 ATPases associated with a variety of cellular activities CEG15_00460 SM00962 SRP54-type protein, GTPase domain CEG15_00460 SM00963 SRP54-type protein, helical bundle domain CEG15_00465 SM00382 ATPases associated with a variety of cellular activities CEG15_00480 SM00450 Rhodanese Homology Domain CEG15_00505 SM00563 Phosphate acyltransferases CEG15_00540 SM01038 Beta galactosidase small chain CEG15_00555 SM00487 DEAD-like helicases superfamily CEG15_00645 SM00360 RNA recognition motif CEG15_00720 SM00052 Putative diguanylate phosphodiesterase CEG15_00720 SM00267 diguanylate cyclase CEG15_00720 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEG15_00725 SM00382 ATPases associated with a variety of cellular activities CEG15_00725 SM00448 cheY-homologous receiver domain CEG15_00730 SM00091 PAS domain CEG15_00730 SM00387 Histidine kinase-like ATPases CEG15_00730 SM00388 His Kinase A (phosphoacceptor) domain CEG15_00740 SM01230 CEG15_00740 CEG15_00780 SM00363 S4 RNA-binding domain CEG15_00795 SM00382 ATPases associated with a variety of cellular activities CEG15_00875 SM00316 Ribosomal protein S1-like RNA-binding domain CEG15_00875 SM00732 Likely ribonuclease with RNase H fold. CEG15_00920 SM00448 cheY-homologous receiver domain CEG15_00920 SM00862 Transcriptional regulatory protein, C terminal CEG15_00925 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEG15_00925 SM00387 Histidine kinase-like ATPases CEG15_00925 SM00388 His Kinase A (phosphoacceptor) domain CEG15_00935 SM00487 DEAD-like helicases superfamily CEG15_00935 SM00490 helicase superfamily c-terminal domain CEG15_00940 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CEG15_00940 SM00954 Region found in RelA / SpoT proteins CEG15_00945 SM01409 CEG15_00945 CEG15_00950 SM00072 Guanylate kinase homologues. CEG15_00965 SM00487 DEAD-like helicases superfamily CEG15_00965 SM00490 helicase superfamily c-terminal domain CEG15_00975 SM00357 Cold shock protein domain CEG15_00975 SM00382 ATPases associated with a variety of cellular activities CEG15_00975 SM00959 Rho termination factor, N-terminal domain CEG15_01040 SM01321 CEG15_01040 CEG15_01045 SM00155 Phospholipase D. Active site motifs. CEG15_01100 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CEG15_01100 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CEG15_01105 SM00649 Ribosomal protein L11/L12 CEG15_01130 SM00663 RNA polymerase I subunit A N-terminus CEG15_01175 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEG15_01175 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEG15_01195 SM00479 CEG15_01195 CEG15_01250 SM00257 Lysin motif CEG15_01250 SM00646 CEG15_01250 CEG15_01255 SM00853 MutL C terminal dimerisation domain CEG15_01255 SM01340 CEG15_01255 CEG15_01275 SM00244 prohibitin homologues CEG15_01280 SM00244 prohibitin homologues CEG15_01295 SM00320 WD40 repeats CEG15_01335 SM00838 Elongation factor G C-terminus CEG15_01335 SM00889 Elongation factor G, domain IV CEG15_01370 SM00382 ATPases associated with a variety of cellular activities CEG15_01375 SM01005 Alanine racemase, C-terminal domain CEG15_01510 SM01018 B12 binding domain CEG15_01535 SM00116 Domain in cystathionine beta-synthase and other proteins. CEG15_01535 SM00924 MgtE intracellular N domain CEG15_01555 SM00421 helix_turn_helix, Lux Regulon CEG15_01565 SM00052 Putative diguanylate phosphodiesterase CEG15_01565 SM00267 diguanylate cyclase CEG15_01585 SM00965 Secretin and TonB N terminus short domain CEG15_01590 SM00382 ATPases associated with a variety of cellular activities CEG15_01595 SM00028 Tetratricopeptide repeats CEG15_01600 SM00382 ATPases associated with a variety of cellular activities CEG15_01670 SM00316 Ribosomal protein S1-like RNA-binding domain CEG15_01795 SM00650 Ribosomal RNA adenine dimethylases CEG15_01815 SM00271 DnaJ molecular chaperone homology domain CEG15_01875 SM00478 endonuclease III CEG15_01875 SM00525 CEG15_01875 CEG15_01900 SM00347 helix_turn_helix multiple antibiotic resistance protein CEG15_01915 SM00347 helix_turn_helix multiple antibiotic resistance protein CEG15_01950 SM00478 endonuclease III CEG15_01965 SM00729 Elongator protein 3, MiaB family, Radical SAM CEG15_01980 SM01152 CEG15_01980 CEG15_02010 SM00732 Likely ribonuclease with RNase H fold. CEG15_02035 SM00731 SprT homologues. CEG15_02045 SM00861 Transketolase, pyrimidine binding domain CEG15_02060 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CEG15_02100 SM00091 PAS domain CEG15_02100 SM00267 diguanylate cyclase CEG15_02115 SM00420 helix_turn_helix, Deoxyribose operon repressor CEG15_02115 SM01134 CEG15_02115 CEG15_02125 SM00563 Phosphate acyltransferases CEG15_02165 SM00886 Stress responsive A/B Barrel Domain CEG15_02185 SM00400 zinc finger CEG15_02185 SM00493 CEG15_02185 CEG15_02185 SM00766 DNA primase DnaG DnaB-binding CEG15_02210 SM01207 CEG15_02210 CEG15_02215 SM00905 Dihydroneopterin aldolase CEG15_02260 SM00257 Lysin motif CEG15_02270 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CEG15_02270 SM00534 ATPase domain of DNA mismatch repair MUTS family CEG15_02295 SM00382 ATPases associated with a variety of cellular activities CEG15_02305 SM00382 ATPases associated with a variety of cellular activities CEG15_02315 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CEG15_02385 SM00829 Enoylreductase CEG15_02410 SM01091 Transporter associated domain CEG15_02420 SM00382 ATPases associated with a variety of cellular activities CEG15_02420 SM00962 SRP54-type protein, GTPase domain CEG15_02420 SM00963 SRP54-type protein, helical bundle domain CEG15_02485 SM00644 CEG15_02485 CEG15_02510 SM00345 helix_turn_helix gluconate operon transcriptional repressor CEG15_02510 SM00895 CEG15_02510 CEG15_02540 SM00947 Carbonic anhydrase CEG15_02550 SM00382 ATPases associated with a variety of cellular activities CEG15_02605 SM00487 DEAD-like helicases superfamily CEG15_02605 SM00490 helicase superfamily c-terminal domain CEG15_02605 SM00847 Helicase associated domain (HA2) Add an annotation CEG15_02645 SM00938 Nitrogen regulatory protein P-II CEG15_02665 SM00382 ATPases associated with a variety of cellular activities CEG15_02675 SM01068 Putative carbohydrate binding domain CEG15_02695 SM00382 ATPases associated with a variety of cellular activities CEG15_02700 SM00382 ATPases associated with a variety of cellular activities CEG15_02720 SM00091 PAS domain CEG15_02720 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEG15_02720 SM00387 Histidine kinase-like ATPases CEG15_02720 SM00388 His Kinase A (phosphoacceptor) domain CEG15_02720 SM00448 cheY-homologous receiver domain CEG15_02790 SM01103 CEG15_02790 CEG15_02800 SM00382 ATPases associated with a variety of cellular activities CEG15_02835 SM00316 Ribosomal protein S1-like RNA-binding domain CEG15_02835 SM00322 K homology RNA-binding domain CEG15_02855 SM01387 CEG15_02855 CEG15_02860 SM00316 Ribosomal protein S1-like RNA-binding domain CEG15_02860 SM00322 K homology RNA-binding domain CEG15_02865 SM00028 Tetratricopeptide repeats CEG15_02870 SM00347 helix_turn_helix multiple antibiotic resistance protein CEG15_02890 SM00052 Putative diguanylate phosphodiesterase CEG15_02890 SM00091 PAS domain CEG15_02890 SM00267 diguanylate cyclase CEG15_02915 SM00052 Putative diguanylate phosphodiesterase CEG15_02915 SM00267 diguanylate cyclase CEG15_02925 SM00487 DEAD-like helicases superfamily CEG15_02925 SM00490 helicase superfamily c-terminal domain CEG15_02950 SM00382 ATPases associated with a variety of cellular activities CEG15_02965 SM00927 DNA mismatch repair enzyme MutH CEG15_02975 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CEG15_03020 SM00530 Helix-turn-helix XRE-family like proteins CEG15_03050 SM00382 ATPases associated with a variety of cellular activities CEG15_03060 SM00736 Dystroglycan-type cadherin-like domains. CEG15_03095 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CEG15_03110 SM00904 Riboflavin kinase CEG15_03160 SM00448 cheY-homologous receiver domain CEG15_03160 SM00850 LytTr DNA-binding domain CEG15_03175 SM00830 Chorismate mutase type II CEG15_03185 SM00382 ATPases associated with a variety of cellular activities CEG15_03205 SM00052 Putative diguanylate phosphodiesterase CEG15_03205 SM00267 diguanylate cyclase CEG15_03215 SM00830 Chorismate mutase type II CEG15_03230 SM00363 S4 RNA-binding domain CEG15_03240 SM00382 ATPases associated with a variety of cellular activities CEG15_03240 SM01086 C-terminal, D2-small domain, of ClpB protein CEG15_03300 SM00448 cheY-homologous receiver domain CEG15_03300 SM00862 Transcriptional regulatory protein, C terminal CEG15_03305 SM00091 PAS domain CEG15_03305 SM00387 Histidine kinase-like ATPases CEG15_03305 SM00388 His Kinase A (phosphoacceptor) domain CEG15_03335 SM00382 ATPases associated with a variety of cellular activities CEG15_03370 SM00116 Domain in cystathionine beta-synthase and other proteins. CEG15_03385 SM01323 CEG15_03385 CEG15_03430 SM00271 DnaJ molecular chaperone homology domain CEG15_03455 SM00562 CEG15_03455 CEG15_03490 SM00564 beta-propeller repeat CEG15_03495 SM00382 ATPases associated with a variety of cellular activities CEG15_03510 SM00116 Domain in cystathionine beta-synthase and other proteins. CEG15_03510 SM01240 CEG15_03510 CEG15_03525 SM00495 Chitin-binding domain type 3 CEG15_03625 SM00530 Helix-turn-helix XRE-family like proteins CEG15_03680 SM00487 DEAD-like helicases superfamily CEG15_03750 SM00271 DnaJ molecular chaperone homology domain CEG15_03790 SM00829 Enoylreductase CEG15_03805 SM00062 Bacterial periplasmic substrate-binding proteins CEG15_03815 SM01211 CEG15_03815 CEG15_03895 SM00861 Transketolase, pyrimidine binding domain CEG15_03920 SM00981 CEG15_03920 CEG15_03940 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CEG15_03940 SM00475 5'-3' exonuclease CEG15_03950 SM00267 diguanylate cyclase CEG15_03955 SM00028 Tetratricopeptide repeats CEG15_03985 SM00382 ATPases associated with a variety of cellular activities CEG15_03985 SM00930 CEG15_03985 CEG15_04000 SM00354 helix_turn _helix lactose operon repressor CEG15_04010 SM00642 Alpha-amylase domain CEG15_04015 SM00448 cheY-homologous receiver domain CEG15_04015 SM00862 Transcriptional regulatory protein, C terminal CEG15_04020 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEG15_04020 SM00387 Histidine kinase-like ATPases CEG15_04020 SM00388 His Kinase A (phosphoacceptor) domain CEG15_04070 SM01321 CEG15_04070 CEG15_04075 SM00226 Low molecular weight phosphatase family CEG15_04085 SM00984 UDP binding domain CEG15_04090 SM00984 UDP binding domain CEG15_04200 SM00729 Elongator protein 3, MiaB family, Radical SAM CEG15_04215 SM00936 Penicillin-binding protein 5, C-terminal domain CEG15_04270 SM00116 Domain in cystathionine beta-synthase and other proteins. CEG15_04270 SM01091 Transporter associated domain CEG15_04285 SM00729 Elongator protein 3, MiaB family, Radical SAM CEG15_04320 SM00771 ZipA, C-terminal domain (FtsZ-binding) CEG15_04325 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CEG15_04325 SM00292 breast cancer carboxy-terminal domain CEG15_04325 SM00532 Ligase N family CEG15_04340 SM00422 helix_turn_helix, mercury resistance CEG15_04350 SM00244 prohibitin homologues CEG15_04380 SM00862 Transcriptional regulatory protein, C terminal CEG15_04385 SM00387 Histidine kinase-like ATPases CEG15_04405 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CEG15_04480 SM00479 CEG15_04480 CEG15_04495 SM00478 endonuclease III CEG15_04495 SM00525 CEG15_04495 CEG15_04505 SM00900 CEG15_04505 CEG15_04545 SM00923 MbtH-like protein CEG15_04550 SM00823 Phosphopantetheine attachment site CEG15_04550 SM00824 Thioesterase CEG15_04615 SM00487 DEAD-like helicases superfamily CEG15_04615 SM00490 helicase superfamily c-terminal domain CEG15_04620 SM00382 ATPases associated with a variety of cellular activities CEG15_04620 SM00448 cheY-homologous receiver domain CEG15_04635 SM00729 Elongator protein 3, MiaB family, Radical SAM CEG15_04640 SM00852 Probable molybdopterin binding domain CEG15_04660 SM00267 diguanylate cyclase CEG15_04665 SM00116 Domain in cystathionine beta-synthase and other proteins. CEG15_04755 SM00448 cheY-homologous receiver domain CEG15_04775 SM00382 ATPases associated with a variety of cellular activities CEG15_04785 SM00493 CEG15_04785 CEG15_04820 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CEG15_04840 SM00870 CEG15_04840 CEG15_04865 SM00487 DEAD-like helicases superfamily CEG15_04865 SM00491 CEG15_04865 CEG15_04895 SM00474 3'-5' exonuclease CEG15_04935 SM00495 Chitin-binding domain type 3 CEG15_04935 SM00636 CEG15_04935 CEG15_04975 SM00642 Alpha-amylase domain CEG15_04980 SM00487 DEAD-like helicases superfamily CEG15_04980 SM00490 helicase superfamily c-terminal domain CEG15_05000 SM00448 cheY-homologous receiver domain CEG15_05000 SM00862 Transcriptional regulatory protein, C terminal CEG15_05005 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEG15_05005 SM00387 Histidine kinase-like ATPases CEG15_05035 SM00382 ATPases associated with a variety of cellular activities CEG15_05035 SM00448 cheY-homologous receiver domain CEG15_05040 SM00387 Histidine kinase-like ATPases CEG15_05040 SM00388 His Kinase A (phosphoacceptor) domain CEG15_05060 SM00382 ATPases associated with a variety of cellular activities CEG15_05060 SM00994 ClpX C4-type zinc finger CEG15_05060 SM01086 C-terminal, D2-small domain, of ClpB protein CEG15_05065 SM00382 ATPases associated with a variety of cellular activities CEG15_05065 SM00464 Found in ATP-dependent protease La (LON) CEG15_05070 SM00411 bacterial (prokaryotic) histone like domain CEG15_05090 SM00316 Ribosomal protein S1-like RNA-binding domain CEG15_05095 SM00411 bacterial (prokaryotic) histone like domain CEG15_05105 SM00028 Tetratricopeptide repeats CEG15_05110 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CEG15_05130 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CEG15_05130 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CEG15_05135 SM00344 helix_turn_helix ASNC type CEG15_05140 SM00843 CEG15_05140 CEG15_05195 SM00729 Elongator protein 3, MiaB family, Radical SAM CEG15_05200 SM00020 Trypsin-like serine protease CEG15_05205 SM00052 Putative diguanylate phosphodiesterase CEG15_05205 SM00091 PAS domain CEG15_05300 SM00481 DNA polymerase alpha chain like domain CEG15_05310 SM00363 S4 RNA-binding domain CEG15_05315 SM00052 Putative diguanylate phosphodiesterase CEG15_05315 SM00267 diguanylate cyclase CEG15_05320 SM00382 ATPases associated with a variety of cellular activities CEG15_05325 SM00382 ATPases associated with a variety of cellular activities CEG15_05335 SM00267 diguanylate cyclase CEG15_05360 SM00919 Malic enzyme, NAD binding domain CEG15_05360 SM01274 CEG15_05360 CEG15_05425 SM00448 cheY-homologous receiver domain CEG15_05430 SM00387 Histidine kinase-like ATPases CEG15_05470 SM00528 Domain in histone-like proteins of HNS family CEG15_05530 SM00357 Cold shock protein domain CEG15_05540 SM00382 ATPases associated with a variety of cellular activities CEG15_05540 SM01086 C-terminal, D2-small domain, of ClpB protein CEG15_05545 SM00316 Ribosomal protein S1-like RNA-binding domain CEG15_05570 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CEG15_05570 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CEG15_05570 SM00493 CEG15_05570 CEG15_05605 SM00354 helix_turn _helix lactose operon repressor CEG15_05615 SM00448 cheY-homologous receiver domain CEG15_05615 SM00862 Transcriptional regulatory protein, C terminal CEG15_05740 SM01131 CEG15_05740 CEG15_05770 SM00382 ATPases associated with a variety of cellular activities CEG15_05775 SM00382 ATPases associated with a variety of cellular activities CEG15_05795 SM00382 ATPases associated with a variety of cellular activities CEG15_05825 SM00155 Phospholipase D. Active site motifs. CEG15_05845 SM00052 Putative diguanylate phosphodiesterase CEG15_05855 SM00382 ATPases associated with a variety of cellular activities CEG15_05895 SM00487 DEAD-like helicases superfamily CEG15_05895 SM00490 helicase superfamily c-terminal domain CEG15_05915 SM00387 Histidine kinase-like ATPases CEG15_05920 SM00448 cheY-homologous receiver domain CEG15_05920 SM00862 Transcriptional regulatory protein, C terminal CEG15_05930 SM00487 DEAD-like helicases superfamily CEG15_05930 SM00490 helicase superfamily c-terminal domain CEG15_05935 SM00363 S4 RNA-binding domain CEG15_05960 SM00382 ATPases associated with a variety of cellular activities CEG15_06000 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEG15_06000 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEG15_06000 SM01049 CEG15_06000 CEG15_06015 SM00852 Probable molybdopterin binding domain CEG15_06045 SM00434 DNA Topoisomerase IV CEG15_06050 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEG15_06070 SM00342 helix_turn_helix, arabinose operon control protein CEG15_06110 SM00382 ATPases associated with a variety of cellular activities CEG15_06125 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEG15_06125 SM00387 Histidine kinase-like ATPases CEG15_06125 SM00388 His Kinase A (phosphoacceptor) domain CEG15_06130 SM00448 cheY-homologous receiver domain CEG15_06130 SM00862 Transcriptional regulatory protein, C terminal CEG15_06155 SM00345 helix_turn_helix gluconate operon transcriptional repressor CEG15_06155 SM00895 CEG15_06155 CEG15_06240 SM00327 von Willebrand factor (vWF) type A domain CEG15_06245 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CEG15_06265 SM00382 ATPases associated with a variety of cellular activities CEG15_06280 SM00062 Bacterial periplasmic substrate-binding proteins CEG15_06290 SM00028 Tetratricopeptide repeats CEG15_06290 SM00267 diguanylate cyclase CEG15_06320 SM00316 Ribosomal protein S1-like RNA-binding domain CEG15_06330 SM01321 CEG15_06330 CEG15_06350 SM00382 ATPases associated with a variety of cellular activities CEG15_06360 SM00945 ProQ/FINO family CEG15_06365 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CEG15_06365 SM00245 tail specific protease CEG15_06400 SM00981 CEG15_06400 CEG15_06410 SM00382 ATPases associated with a variety of cellular activities CEG15_06460 SM01022 CEG15_06460 CEG15_06570 SM00100 Cyclic nucleotide-monophosphate binding domain CEG15_06570 SM00419 helix_turn_helix, cAMP Regulatory protein CEG15_06600 SM00382 ATPases associated with a variety of cellular activities CEG15_06635 SM00382 ATPases associated with a variety of cellular activities CEG15_06640 SM00421 helix_turn_helix, Lux Regulon CEG15_06640 SM00448 cheY-homologous receiver domain CEG15_06645 SM00387 Histidine kinase-like ATPases CEG15_06665 SM00382 ATPases associated with a variety of cellular activities CEG15_06690 SM01144 CEG15_06690 CEG15_06700 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEG15_06770 SM00849 Metallo-beta-lactamase superfamily CEG15_06855 SM00382 ATPases associated with a variety of cellular activities CEG15_06855 SM00487 DEAD-like helicases superfamily CEG15_06855 SM00490 helicase superfamily c-terminal domain CEG15_06855 SM00847 Helicase associated domain (HA2) Add an annotation CEG15_06870 SM00479 CEG15_06870 CEG15_06875 SM00267 diguanylate cyclase CEG15_06875 SM01079 CEG15_06875 CEG15_06920 SM00354 helix_turn _helix lactose operon repressor CEG15_06930 SM00487 DEAD-like helicases superfamily CEG15_06930 SM00490 helicase superfamily c-terminal domain CEG15_06945 SM00357 Cold shock protein domain CEG15_06955 SM00448 cheY-homologous receiver domain CEG15_06960 SM00387 Histidine kinase-like ATPases CEG15_06970 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEG15_06970 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEG15_06975 SM01005 Alanine racemase, C-terminal domain CEG15_06985 SM00267 diguanylate cyclase CEG15_07000 SM00091 PAS domain CEG15_07000 SM00382 ATPases associated with a variety of cellular activities CEG15_07060 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEG15_07060 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEG15_07075 SM00448 cheY-homologous receiver domain CEG15_07085 SM00138 Methyltransferase, chemotaxis proteins CEG15_07090 SM00260 Two component signalling adaptor domain CEG15_07095 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEG15_07095 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEG15_07100 SM00073 Histidine Phosphotransfer domain CEG15_07100 SM00260 Two component signalling adaptor domain CEG15_07100 SM00387 Histidine kinase-like ATPases CEG15_07100 SM01231 CEG15_07100 CEG15_07110 SM00448 cheY-homologous receiver domain CEG15_07115 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEG15_07120 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CEG15_07130 SM00100 Cyclic nucleotide-monophosphate binding domain CEG15_07130 SM00116 Domain in cystathionine beta-synthase and other proteins. CEG15_07135 SM00479 CEG15_07135 CEG15_07140 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEG15_07140 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEG15_07150 SM00347 helix_turn_helix multiple antibiotic resistance protein CEG15_07165 SM00849 Metallo-beta-lactamase superfamily CEG15_07250 SM00382 ATPases associated with a variety of cellular activities CEG15_07255 SM00450 Rhodanese Homology Domain CEG15_07260 SM00062 Bacterial periplasmic substrate-binding proteins CEG15_07265 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEG15_07265 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEG15_07270 SM00640 Glycosyl hydrolases family 32 CEG15_07275 SM00354 helix_turn _helix lactose operon repressor CEG15_07290 SM00052 Putative diguanylate phosphodiesterase CEG15_07300 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEG15_07300 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEG15_07385 SM00267 diguanylate cyclase CEG15_07395 SM00642 Alpha-amylase domain CEG15_07405 SM00260 Two component signalling adaptor domain CEG15_07405 SM00448 cheY-homologous receiver domain CEG15_07410 SM00062 Bacterial periplasmic substrate-binding proteins CEG15_07415 SM00448 cheY-homologous receiver domain CEG15_07420 SM00387 Histidine kinase-like ATPases CEG15_07460 SM00028 Tetratricopeptide repeats CEG15_07505 SM00382 ATPases associated with a variety of cellular activities CEG15_07520 SM00855 Phosphoglycerate mutase family CEG15_07560 SM00382 ATPases associated with a variety of cellular activities CEG15_07570 SM00382 ATPases associated with a variety of cellular activities CEG15_07580 SM00479 CEG15_07580 CEG15_07600 SM00052 Putative diguanylate phosphodiesterase CEG15_07600 SM00267 diguanylate cyclase CEG15_07610 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CEG15_07610 SM00091 PAS domain CEG15_07610 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEG15_07625 SM00411 bacterial (prokaryotic) histone like domain CEG15_07630 SM00873 B3/4 domain CEG15_07630 SM00874 tRNA synthetase B5 domain CEG15_07630 SM00896 Ferredoxin-fold anticodon binding domain CEG15_07675 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CEG15_07675 SM00465 GIY-YIG type nucleases (URI domain) CEG15_07680 SM00421 helix_turn_helix, Lux Regulon CEG15_07680 SM00448 cheY-homologous receiver domain CEG15_07685 SM00486 DNA polymerase type-B family CEG15_07695 SM00841 Elongation factor P, C-terminal CEG15_07695 SM01185 CEG15_07695 CEG15_07705 SM01022 CEG15_07705 CEG15_07710 SM00345 helix_turn_helix gluconate operon transcriptional repressor CEG15_07710 SM00866 CEG15_07710 CEG15_07760 SM00671 Sel1-like repeats. CEG15_07810 SM00267 diguanylate cyclase CEG15_07830 SM00387 Histidine kinase-like ATPases CEG15_07830 SM00388 His Kinase A (phosphoacceptor) domain CEG15_07830 SM00448 cheY-homologous receiver domain CEG15_07845 SM00028 Tetratricopeptide repeats CEG15_07900 SM00382 ATPases associated with a variety of cellular activities CEG15_07905 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CEG15_07915 SM00840 CEG15_07915 CEG15_07930 SM00052 Putative diguanylate phosphodiesterase CEG15_07950 SM00491 CEG15_07950 CEG15_07970 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEG15_07970 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEG15_07990 SM00062 Bacterial periplasmic substrate-binding proteins CEG15_07990 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CEG15_07995 SM00382 ATPases associated with a variety of cellular activities CEG15_08020 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEG15_08020 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEG15_08040 SM00763 PrkA AAA domain CEG15_08070 SM00382 ATPases associated with a variety of cellular activities CEG15_08075 SM00849 Metallo-beta-lactamase superfamily CEG15_08090 SM00382 ATPases associated with a variety of cellular activities CEG15_08105 SM00487 DEAD-like helicases superfamily CEG15_08105 SM00490 helicase superfamily c-terminal domain CEG15_08105 SM00982 CEG15_08105 CEG15_08105 SM01058 CarD-like/TRCF domain CEG15_08155 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEG15_08155 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEG15_08165 SM00345 helix_turn_helix gluconate operon transcriptional repressor CEG15_08195 SM00729 Elongator protein 3, MiaB family, Radical SAM CEG15_08195 SM00876 Biotin and Thiamin Synthesis associated domain CEG15_08210 SM00382 ATPases associated with a variety of cellular activities CEG15_08230 SM00382 ATPases associated with a variety of cellular activities CEG15_08265 SM00382 ATPases associated with a variety of cellular activities CEG15_08270 SM00382 ATPases associated with a variety of cellular activities CEG15_08290 SM00052 Putative diguanylate phosphodiesterase CEG15_08290 SM00421 helix_turn_helix, Lux Regulon CEG15_08290 SM00448 cheY-homologous receiver domain CEG15_08295 SM00062 Bacterial periplasmic substrate-binding proteins CEG15_08295 SM00387 Histidine kinase-like ATPases CEG15_08295 SM00388 His Kinase A (phosphoacceptor) domain CEG15_08295 SM00448 cheY-homologous receiver domain CEG15_08315 SM00563 Phosphate acyltransferases CEG15_08375 SM00825 Beta-ketoacyl synthase CEG15_08385 SM00822 CEG15_08385 CEG15_08390 SM00825 Beta-ketoacyl synthase CEG15_08455 SM00354 helix_turn _helix lactose operon repressor CEG15_08470 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEG15_08470 SM00387 Histidine kinase-like ATPases CEG15_08470 SM00388 His Kinase A (phosphoacceptor) domain CEG15_08475 SM00448 cheY-homologous receiver domain CEG15_08475 SM00862 Transcriptional regulatory protein, C terminal CEG15_08490 SM00344 helix_turn_helix ASNC type CEG15_08500 SM00387 Histidine kinase-like ATPases CEG15_08500 SM00388 His Kinase A (phosphoacceptor) domain CEG15_08505 SM00448 cheY-homologous receiver domain CEG15_08505 SM00862 Transcriptional regulatory protein, C terminal CEG15_08520 SM01236 CEG15_08520 CEG15_08550 SM00062 Bacterial periplasmic substrate-binding proteins CEG15_08550 SM00267 diguanylate cyclase CEG15_08575 SM00344 helix_turn_helix ASNC type CEG15_08585 SM00978 CEG15_08585 CEG15_08595 SM00563 Phosphate acyltransferases CEG15_08620 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CEG15_08655 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CEG15_08660 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CEG15_08665 SM01144 CEG15_08665 CEG15_08685 SM00260 Two component signalling adaptor domain CEG15_08685 SM00448 cheY-homologous receiver domain CEG15_08750 SM00825 Beta-ketoacyl synthase CEG15_08760 SM00822 CEG15_08760 CEG15_08765 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CEG15_08795 SM00363 S4 RNA-binding domain CEG15_08800 SM00316 Ribosomal protein S1-like RNA-binding domain CEG15_08820 SM00859 Semialdehyde dehydrogenase, NAD binding domain CEG15_08875 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CEG15_08875 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CEG15_08875 SM00493 CEG15_08875 CEG15_08945 SM00382 ATPases associated with a variety of cellular activities CEG15_08955 SM00260 Two component signalling adaptor domain CEG15_08960 SM00260 Two component signalling adaptor domain CEG15_08970 SM00448 cheY-homologous receiver domain CEG15_08975 SM00073 Histidine Phosphotransfer domain CEG15_08975 SM00260 Two component signalling adaptor domain CEG15_08975 SM00387 Histidine kinase-like ATPases CEG15_08975 SM01231 CEG15_08975 CEG15_08985 SM00448 cheY-homologous receiver domain CEG15_09000 SM00382 ATPases associated with a variety of cellular activities CEG15_09000 SM00962 SRP54-type protein, GTPase domain CEG15_09010 SM00855 Phosphoglycerate mutase family CEG15_09025 SM00836 DALR anticodon binding domain CEG15_09025 SM01016 Arginyl tRNA synthetase N terminal dom CEG15_09045 SM00899 CEG15_09045 CEG15_09050 SM00342 helix_turn_helix, arabinose operon control protein CEG15_09060 SM00382 ATPases associated with a variety of cellular activities CEG15_09070 SM00881 CoA binding domain CEG15_09085 SM00861 Transketolase, pyrimidine binding domain CEG15_09175 SM00859 Semialdehyde dehydrogenase, NAD binding domain CEG15_09185 SM00825 Beta-ketoacyl synthase CEG15_09225 SM00463 Small MutS-related domain CEG15_09280 SM00382 ATPases associated with a variety of cellular activities CEG15_09305 SM00382 ATPases associated with a variety of cellular activities CEG15_09305 SM00448 cheY-homologous receiver domain CEG15_09310 SM00091 PAS domain CEG15_09310 SM00387 Histidine kinase-like ATPases CEG15_09310 SM00388 His Kinase A (phosphoacceptor) domain CEG15_09315 SM00382 ATPases associated with a variety of cellular activities CEG15_09405 SM01130 CEG15_09405 CEG15_09445 SM00857 Resolvase, N terminal domain CEG15_09490 SM00530 Helix-turn-helix XRE-family like proteins CEG15_09500 SM00487 DEAD-like helicases superfamily CEG15_09570 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEG15_09570 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEG15_09645 SM00937 CEG15_09645 CEG15_09665 SM01400 CEG15_09665 CEG15_09785 SM00047 Lysozyme subfamily 2 CEG15_09830 SM00138 Methyltransferase, chemotaxis proteins CEG15_09835 SM00260 Two component signalling adaptor domain CEG15_09835 SM00448 cheY-homologous receiver domain CEG15_09840 SM00858 CEG15_09840 CEG15_09900 SM01081 Putative carbohydrate binding domain CEG15_09915 SM00363 S4 RNA-binding domain CEG15_09955 SM00479 CEG15_09955 CEG15_09970 SM00849 Metallo-beta-lactamase superfamily CEG15_09975 SM00257 Lysin motif CEG15_09990 SM00938 Nitrogen regulatory protein P-II CEG15_10000 SM00977 TilS substrate C-terminal domain CEG15_10010 SM00481 DNA polymerase alpha chain like domain CEG15_10040 SM00935 Outer membrane protein (OmpH-like) CEG15_10050 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CEG15_10095 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CEG15_10150 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CEG15_10200 SM00267 diguanylate cyclase CEG15_10240 SM00900 CEG15_10240 CEG15_10290 SM00464 Found in ATP-dependent protease La (LON) CEG15_10325 SM00925 MltA specific insert domain CEG15_10405 SM00354 helix_turn _helix lactose operon repressor CEG15_10450 SM00838 Elongation factor G C-terminus CEG15_10450 SM00889 Elongation factor G, domain IV CEG15_10455 SM00382 ATPases associated with a variety of cellular activities CEG15_10485 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CEG15_10490 SM01133 CEG15_10490 CEG15_10525 SM00986 Uracil DNA glycosylase superfamily CEG15_10525 SM00987 UreE urease accessory protein, C-terminal domain CEG15_10530 SM00518 AP endonuclease family 2 CEG15_10565 SM00448 cheY-homologous receiver domain CEG15_10565 SM00862 Transcriptional regulatory protein, C terminal CEG15_10575 SM00073 Histidine Phosphotransfer domain CEG15_10575 SM00091 PAS domain CEG15_10575 SM00387 Histidine kinase-like ATPases CEG15_10575 SM00388 His Kinase A (phosphoacceptor) domain CEG15_10575 SM00448 cheY-homologous receiver domain CEG15_10580 SM00729 Elongator protein 3, MiaB family, Radical SAM CEG15_10640 SM00851 MGS-like domain CEG15_10640 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CEG15_10645 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CEG15_10660 SM00957 SecA DEAD-like domain CEG15_10660 SM00958 SecA preprotein cross-linking domain CEG15_10675 SM00864 Tubulin/FtsZ family, GTPase domain CEG15_10675 SM00865 Tubulin/FtsZ family, C-terminal domain CEG15_10680 SM00842 Cell division protein FtsA CEG15_10765 SM00749 bacterial OsmY and nodulation domain CEG15_10820 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CEG15_10825 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CEG15_10830 SM00434 DNA Topoisomerase IV CEG15_10835 SM00387 Histidine kinase-like ATPases CEG15_10835 SM00433 TopoisomeraseII CEG15_10875 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEG15_10885 SM00880 CEG15_10885 CEG15_10885 SM01118 CEG15_10885 CEG15_10900 SM00287 Bacterial SH3 domain homologues CEG15_10910 SM00382 ATPases associated with a variety of cellular activities CEG15_10920 SM01192 CEG15_10920 CEG15_10920 SM01193 CEG15_10920 CEG15_10935 SM00954 Region found in RelA / SpoT proteins CEG15_10945 SM00073 Histidine Phosphotransfer domain CEG15_10945 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEG15_10945 SM00387 Histidine kinase-like ATPases CEG15_10945 SM00388 His Kinase A (phosphoacceptor) domain CEG15_10945 SM00448 cheY-homologous receiver domain CEG15_10970 SM00358 Double-stranded RNA binding motif CEG15_10970 SM00535 Ribonuclease III family CEG15_11100 SM00014 Acid phosphatase homologues CEG15_11105 SM00917 LeuA allosteric (dimerisation) domain CEG15_11110 SM01329 CEG15_11110 CEG15_11170 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CEG15_11225 SM00487 DEAD-like helicases superfamily CEG15_11225 SM00490 helicase superfamily c-terminal domain CEG15_11235 SM00670 Large family of predicted nucleotide-binding domains CEG15_11260 SM00989 CEG15_11260 CEG15_11265 SM00387 Histidine kinase-like ATPases CEG15_11270 SM00563 Phosphate acyltransferases CEG15_11305 SM00382 ATPases associated with a variety of cellular activities CEG15_11315 SM00116 Domain in cystathionine beta-synthase and other proteins. CEG15_11335 SM00382 ATPases associated with a variety of cellular activities CEG15_11365 SM00116 Domain in cystathionine beta-synthase and other proteins. CEG15_11365 SM00924 MgtE intracellular N domain CEG15_11380 SM00382 ATPases associated with a variety of cellular activities CEG15_11455 SM00382 ATPases associated with a variety of cellular activities CEG15_11530 SM00563 Phosphate acyltransferases CEG15_11535 SM00487 DEAD-like helicases superfamily CEG15_11535 SM00490 helicase superfamily c-terminal domain CEG15_11560 SM00662 RNA polymerases D CEG15_11565 SM00363 S4 RNA-binding domain CEG15_11565 SM01390 CEG15_11565 CEG15_11630 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CEG15_11635 SM01374 CEG15_11635 CEG15_11655 SM00322 K homology RNA-binding domain CEG15_11670 SM01382 CEG15_11670 CEG15_11670 SM01383 CEG15_11670 CEG15_11690 SM01403 CEG15_11690 CEG15_11695 SM00967 RNA 2'-O ribose methyltransferase substrate binding CEG15_11700 SM00316 Ribosomal protein S1-like RNA-binding domain CEG15_11700 SM00357 Cold shock protein domain CEG15_11700 SM00955 CEG15_11700 CEG15_11705 SM00671 Sel1-like repeats. CEG15_11715 SM00788 Adenylosuccinate synthetase CEG15_11745 SM00382 ATPases associated with a variety of cellular activities CEG15_11770 SM00100 Cyclic nucleotide-monophosphate binding domain CEG15_11770 SM00419 helix_turn_helix, cAMP Regulatory protein CEG15_11775 SM01150 CEG15_11775 CEG15_11865 SM00965 Secretin and TonB N terminus short domain CEG15_11930 SM00859 Semialdehyde dehydrogenase, NAD binding domain CEG15_11950 SM00971 Serine acetyltransferase, N-terminal CEG15_11965 SM00450 Rhodanese Homology Domain CEG15_11995 SM00841 Elongation factor P, C-terminal CEG15_11995 SM01185 CEG15_11995 CEG15_12035 SM00829 Enoylreductase CEG15_12045 SM00883 Chaperonin 10 Kd subunit CEG15_12090 SM00382 ATPases associated with a variety of cellular activities CEG15_12090 SM01086 C-terminal, D2-small domain, of ClpB protein CEG15_12105 SM00354 helix_turn _helix lactose operon repressor CEG15_12110 SM00487 DEAD-like helicases superfamily CEG15_12110 SM00490 helicase superfamily c-terminal domain CEG15_12120 SM00919 Malic enzyme, NAD binding domain CEG15_12120 SM01274 CEG15_12120 CEG15_12170 SM00448 cheY-homologous receiver domain CEG15_12170 SM00862 Transcriptional regulatory protein, C terminal CEG15_12175 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEG15_12175 SM00387 Histidine kinase-like ATPases CEG15_12175 SM00388 His Kinase A (phosphoacceptor) domain CEG15_12185 SM00357 Cold shock protein domain CEG15_12250 SM00421 helix_turn_helix, Lux Regulon CEG15_12250 SM00448 cheY-homologous receiver domain CEG15_12255 SM01091 Transporter associated domain CEG15_12270 SM00387 Histidine kinase-like ATPases CEG15_12270 SM00388 His Kinase A (phosphoacceptor) domain CEG15_12270 SM00448 cheY-homologous receiver domain CEG15_12285 SM00479 CEG15_12285 CEG15_12305 SM00878 Biotin carboxylase C-terminal domain CEG15_12325 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEG15_12325 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEG15_12325 SM01049 CEG15_12325 CEG15_12330 SM00422 helix_turn_helix, mercury resistance CEG15_12335 SM00798 AICARFT/IMPCHase bienzyme CEG15_12335 SM00851 MGS-like domain CEG15_12340 SM01209 CEG15_12340 CEG15_12340 SM01210 CEG15_12340 CEG15_12350 SM00411 bacterial (prokaryotic) histone like domain CEG15_12385 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEG15_12385 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEG15_12390 SM00849 Metallo-beta-lactamase superfamily CEG15_12390 SM01027 Beta-Casp domain CEG15_12400 SM00984 UDP binding domain CEG15_12480 SM00226 Low molecular weight phosphatase family CEG15_12635 SM00382 ATPases associated with a variety of cellular activities CEG15_12745 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CEG15_12745 SM01232 CEG15_12745 CEG15_12830 SM00382 ATPases associated with a variety of cellular activities CEG15_12840 SM00382 ATPases associated with a variety of cellular activities CEG15_12870 SM00341 Helicase and RNase D C-terminal CEG15_12870 SM00487 DEAD-like helicases superfamily CEG15_12870 SM00490 helicase superfamily c-terminal domain CEG15_12870 SM00956 CEG15_12870 CEG15_12885 SM00342 helix_turn_helix, arabinose operon control protein CEG15_12915 SM00448 cheY-homologous receiver domain CEG15_12945 SM00382 ATPases associated with a variety of cellular activities CEG15_13015 SM00729 Elongator protein 3, MiaB family, Radical SAM CEG15_13045 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CEG15_13045 SM00474 3'-5' exonuclease CEG15_13045 SM00475 5'-3' exonuclease CEG15_13045 SM00482 DNA polymerase A domain CEG15_13050 SM01004 Delta-aminolevulinic acid dehydratase CEG15_13100 SM00342 helix_turn_helix, arabinose operon control protein CEG15_13115 SM01007 Class II Aldolase and Adducin N-terminal domain CEG15_13135 SM00382 ATPases associated with a variety of cellular activities CEG15_13155 SM00829 Enoylreductase CEG15_13170 SM00342 helix_turn_helix, arabinose operon control protein CEG15_13230 SM00954 Region found in RelA / SpoT proteins CEG15_13260 SM00382 ATPases associated with a variety of cellular activities CEG15_13315 SM00344 helix_turn_helix ASNC type CEG15_13340 SM00876 Biotin and Thiamin Synthesis associated domain CEG15_13495 SM00382 ATPases associated with a variety of cellular activities CEG15_13535 SM00470 ParB-like nuclease domain CEG15_13550 SM01228 CEG15_13550 CEG15_13640 SM00849 Metallo-beta-lactamase superfamily CEG15_13655 SM00342 helix_turn_helix, arabinose operon control protein CEG15_13655 SM00478 endonuclease III CEG15_13655 SM01009 AlkA N-terminal domain CEG15_13745 SM00347 helix_turn_helix multiple antibiotic resistance protein CEG15_13760 SM00450 Rhodanese Homology Domain CEG15_13770 SM00382 ATPases associated with a variety of cellular activities CEG15_13785 SM00382 ATPases associated with a variety of cellular activities CEG15_13810 SM00345 helix_turn_helix gluconate operon transcriptional repressor CEG15_13810 SM00866 CEG15_13810 CEG15_13815 SM00487 DEAD-like helicases superfamily CEG15_13815 SM00490 helicase superfamily c-terminal domain CEG15_13850 SM00829 Enoylreductase CEG15_13870 SM00448 cheY-homologous receiver domain CEG15_13870 SM00862 Transcriptional regulatory protein, C terminal CEG15_13875 SM00387 Histidine kinase-like ATPases CEG15_13935 SM00382 ATPases associated with a variety of cellular activities CEG15_13935 SM01086 C-terminal, D2-small domain, of ClpB protein CEG15_13940 SM00382 ATPases associated with a variety of cellular activities CEG15_14025 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins CEG15_14025 SM00495 Chitin-binding domain type 3 CEG15_14025 SM00636 CEG15_14025 CEG15_14030 SM00345 helix_turn_helix gluconate operon transcriptional repressor CEG15_14035 SM00382 ATPases associated with a variety of cellular activities CEG15_14045 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEG15_14045 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEG15_14065 SM00014 Acid phosphatase homologues CEG15_14075 SM00382 ATPases associated with a variety of cellular activities CEG15_14085 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CEG15_14085 SM00267 diguanylate cyclase CEG15_14100 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CEG15_14110 SM01007 Class II Aldolase and Adducin N-terminal domain CEG15_14125 SM00420 helix_turn_helix, Deoxyribose operon repressor CEG15_14125 SM01134 CEG15_14125 CEG15_14135 SM00642 Alpha-amylase domain CEG15_14165 SM00642 Alpha-amylase domain CEG15_14170 SM00671 Sel1-like repeats. CEG15_14240 SM00267 diguanylate cyclase CEG15_14245 SM00028 Tetratricopeptide repeats CEG15_14265 SM00422 helix_turn_helix, mercury resistance CEG15_14275 SM00257 Lysin motif CEG15_14285 SM00487 DEAD-like helicases superfamily CEG15_14285 SM00490 helicase superfamily c-terminal domain CEG15_14325 SM00642 Alpha-amylase domain CEG15_14340 SM00382 ATPases associated with a variety of cellular activities CEG15_14365 SM00448 cheY-homologous receiver domain CEG15_14365 SM00850 LytTr DNA-binding domain CEG15_14370 SM00052 Putative diguanylate phosphodiesterase CEG15_14390 SM00448 cheY-homologous receiver domain CEG15_14390 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CEG15_14395 SM00073 Histidine Phosphotransfer domain CEG15_14395 SM00091 PAS domain CEG15_14395 SM00387 Histidine kinase-like ATPases CEG15_14395 SM00388 His Kinase A (phosphoacceptor) domain CEG15_14395 SM00448 cheY-homologous receiver domain CEG15_14400 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEG15_14400 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEG15_14430 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CEG15_14435 SM00387 Histidine kinase-like ATPases CEG15_14435 SM00388 His Kinase A (phosphoacceptor) domain CEG15_14435 SM00448 cheY-homologous receiver domain CEG15_14465 SM00354 helix_turn _helix lactose operon repressor CEG15_14500 SM01266 CEG15_14500 CEG15_14545 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEG15_14545 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEG15_14555 SM00342 helix_turn_helix, arabinose operon control protein CEG15_14560 SM00448 cheY-homologous receiver domain CEG15_14565 SM00387 Histidine kinase-like ATPases CEG15_14595 SM00344 helix_turn_helix ASNC type CEG15_14605 SM00458 Ricin-type beta-trefoil CEG15_14620 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins CEG15_14660 SM00382 ATPases associated with a variety of cellular activities CEG15_14705 SM00267 diguanylate cyclase CEG15_14720 SM00342 helix_turn_helix, arabinose operon control protein CEG15_14805 SM00347 helix_turn_helix multiple antibiotic resistance protein CEG15_14830 SM00530 Helix-turn-helix XRE-family like proteins CEG15_14840 SM00020 Trypsin-like serine protease CEG15_14880 SM00354 helix_turn _helix lactose operon repressor CEG15_14895 SM00387 Histidine kinase-like ATPases CEG15_14895 SM00448 cheY-homologous receiver domain CEG15_15000 SM00420 helix_turn_helix, Deoxyribose operon repressor CEG15_15000 SM01134 CEG15_15000 CEG15_15020 SM00382 ATPases associated with a variety of cellular activities CEG15_15055 SM00642 Alpha-amylase domain CEG15_15100 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CEG15_15115 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEG15_15115 SM00387 Histidine kinase-like ATPases CEG15_15120 SM00421 helix_turn_helix, Lux Regulon CEG15_15120 SM00448 cheY-homologous receiver domain CEG15_15160 SM00316 Ribosomal protein S1-like RNA-binding domain CEG15_15160 SM00357 Cold shock protein domain CEG15_15160 SM00955 CEG15_15160 CEG15_15165 SM00487 DEAD-like helicases superfamily CEG15_15165 SM00490 helicase superfamily c-terminal domain CEG15_15180 SM00382 ATPases associated with a variety of cellular activities CEG15_15215 SM00530 Helix-turn-helix XRE-family like proteins CEG15_15220 SM00530 Helix-turn-helix XRE-family like proteins CEG15_15235 SM00382 ATPases associated with a variety of cellular activities CEG15_15425 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CEG15_15755 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CEG15_15995 SM00360 RNA recognition motif CEG15_16000 SM00360 RNA recognition motif CEG15_16120 SM01022 CEG15_16120 CEG15_16400 SM00479 CEG15_16400 CEG15_16435 SM00901 CEG15_16435 CEG15_16465 SM01022 CEG15_16465 CEG15_16595 SM01266 CEG15_16595 CEG15_16715 SM00360 RNA recognition motif CEG15_16730 SM00855 Phosphoglycerate mutase family CEG15_16735 SM00974 CEG15_16735 CEG15_16745 SM01022 CEG15_16745 CEG15_16805 SM00507 HNH nucleases CEG15_17020 SM01022 CEG15_17020 CEG15_17105 SM00881 CoA binding domain CEG15_17145 SM00448 cheY-homologous receiver domain CEG15_17145 SM00862 Transcriptional regulatory protein, C terminal CEG15_17150 SM00387 Histidine kinase-like ATPases CEG15_17150 SM00388 His Kinase A (phosphoacceptor) domain CEG15_17160 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CEG15_17160 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CEG15_17175 SM00267 diguanylate cyclase CEG15_17180 SM00357 Cold shock protein domain CEG15_17190 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEG15_17190 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEG15_17220 SM00382 ATPases associated with a variety of cellular activities CEG15_17245 SM00782 PhnA Zinc-Ribbon CEG15_17280 SM00116 Domain in cystathionine beta-synthase and other proteins. CEG15_17300 SM00345 helix_turn_helix gluconate operon transcriptional repressor CEG15_17300 SM00866 CEG15_17300 CEG15_17350 SM00852 Probable molybdopterin binding domain CEG15_17360 SM00450 Rhodanese Homology Domain CEG15_17365 SM00636 CEG15_17365 CEG15_17380 SM00861 Transketolase, pyrimidine binding domain CEG15_17405 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEG15_17410 SM00867 YceI-like domain CEG15_17425 SM00052 Putative diguanylate phosphodiesterase CEG15_17430 SM00382 ATPases associated with a variety of cellular activities CEG15_17480 SM00062 Bacterial periplasmic substrate-binding proteins CEG15_17480 SM00267 diguanylate cyclase CEG15_17505 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CEG15_17515 SM00450 Rhodanese Homology Domain CEG15_17520 SM00448 cheY-homologous receiver domain CEG15_17525 SM00052 Putative diguanylate phosphodiesterase CEG15_17525 SM00267 diguanylate cyclase CEG15_17525 SM00448 cheY-homologous receiver domain CEG15_17530 SM00387 Histidine kinase-like ATPases CEG15_17530 SM00388 His Kinase A (phosphoacceptor) domain CEG15_17535 SM00387 Histidine kinase-like ATPases CEG15_17545 SM00448 cheY-homologous receiver domain CEG15_17550 SM00448 cheY-homologous receiver domain CEG15_17560 SM00267 diguanylate cyclase CEG15_17560 SM00448 cheY-homologous receiver domain CEG15_17570 SM00382 ATPases associated with a variety of cellular activities CEG15_17600 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CEG15_17600 SM00267 diguanylate cyclase CEG15_17610 SM00495 Chitin-binding domain type 3 CEG15_17610 SM00636 CEG15_17610 CEG15_17615 SM00342 helix_turn_helix, arabinose operon control protein CEG15_17635 SM00862 Transcriptional regulatory protein, C terminal CEG15_17655 SM00073 Histidine Phosphotransfer domain CEG15_17655 SM00387 Histidine kinase-like ATPases CEG15_17655 SM00388 His Kinase A (phosphoacceptor) domain CEG15_17655 SM00448 cheY-homologous receiver domain CEG15_17665 SM00851 MGS-like domain CEG15_17705 SM00387 Histidine kinase-like ATPases CEG15_17705 SM00388 His Kinase A (phosphoacceptor) domain CEG15_17705 SM00448 cheY-homologous receiver domain CEG15_17855 SM00327 von Willebrand factor (vWF) type A domain CEG15_17860 SM00382 ATPases associated with a variety of cellular activities CEG15_17880 SM00487 DEAD-like helicases superfamily CEG15_17880 SM00490 helicase superfamily c-terminal domain CEG15_17890 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEG15_17905 SM00796 Allophanate hydrolase subunit 1 CEG15_17910 SM00797 Allophanate hydrolase subunit 2 CEG15_17925 SM00382 ATPases associated with a variety of cellular activities CEG15_17940 SM00052 Putative diguanylate phosphodiesterase CEG15_17940 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CEG15_17940 SM00267 diguanylate cyclase CEG15_17950 SM00271 DnaJ molecular chaperone homology domain CEG15_17970 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CEG15_17990 SM00052 Putative diguanylate phosphodiesterase CEG15_17990 SM00267 diguanylate cyclase CEG15_17995 SM01057 Eukaryotic-type carbonic anhydrase CEG15_18005 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEG15_18005 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEG15_18020 SM00028 Tetratricopeptide repeats CEG15_18025 SM00116 Domain in cystathionine beta-synthase and other proteins. CEG15_18025 SM00382 ATPases associated with a variety of cellular activities CEG15_18040 SM00347 helix_turn_helix multiple antibiotic resistance protein CEG15_18055 SM00710 Parallel beta-helix repeats CEG15_18120 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEG15_18120 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEG15_18125 SM00642 Alpha-amylase domain CEG15_18140 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEG15_18140 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEG15_18160 SM00327 von Willebrand factor (vWF) type A domain CEG15_18165 SM00028 Tetratricopeptide repeats CEG15_18180 SM00267 diguanylate cyclase CEG15_18190 SM00507 HNH nucleases CEG15_18230 SM00345 helix_turn_helix gluconate operon transcriptional repressor CEG15_18265 SM00829 Enoylreductase CEG15_18295 SM00421 helix_turn_helix, Lux Regulon CEG15_18295 SM00448 cheY-homologous receiver domain CEG15_18300 SM00387 Histidine kinase-like ATPases CEG15_18315 SM00481 DNA polymerase alpha chain like domain CEG15_18340 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CEG15_18345 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CEG15_18355 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CEG15_18375 SM00387 Histidine kinase-like ATPases CEG15_18375 SM00388 His Kinase A (phosphoacceptor) domain CEG15_18375 SM00448 cheY-homologous receiver domain CEG15_18385 SM00342 helix_turn_helix, arabinose operon control protein CEG15_18390 SM00342 helix_turn_helix, arabinose operon control protein CEG15_18405 SM00823 Phosphopantetheine attachment site CEG15_18410 SM00822 CEG15_18410 CEG15_18410 SM00823 Phosphopantetheine attachment site CEG15_18410 SM00825 Beta-ketoacyl synthase CEG15_18410 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CEG15_18435 SM00382 ATPases associated with a variety of cellular activities CEG15_18440 SM00382 ATPases associated with a variety of cellular activities CEG15_18455 SM00481 DNA polymerase alpha chain like domain CEG15_18470 SM00382 ATPases associated with a variety of cellular activities CEG15_18480 SM00670 Large family of predicted nucleotide-binding domains CEG15_18530 SM00487 DEAD-like helicases superfamily CEG15_18535 SM00382 ATPases associated with a variety of cellular activities CEG15_18565 SM00530 Helix-turn-helix XRE-family like proteins CEG15_18580 SM00382 ATPases associated with a variety of cellular activities CEG15_18595 SM01240 CEG15_18595 CEG15_18610 SM00448 cheY-homologous receiver domain CEG15_18625 SM00357 Cold shock protein domain CEG15_18630 SM01322 CEG15_18630 CEG15_18640 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CEG15_18640 SM00382 ATPases associated with a variety of cellular activities CEG15_18690 SM00342 helix_turn_helix, arabinose operon control protein CEG15_18700 SM00091 PAS domain CEG15_18700 SM00267 diguanylate cyclase CEG15_18705 SM00420 helix_turn_helix, Deoxyribose operon repressor CEG15_18705 SM01134 CEG15_18705 CEG15_18710 SM00421 helix_turn_helix, Lux Regulon CEG15_18750 SM00382 ATPases associated with a variety of cellular activities CEG15_18755 SM00421 helix_turn_helix, Lux Regulon CEG15_18765 SM00260 Two component signalling adaptor domain CEG15_18765 SM00448 cheY-homologous receiver domain CEG15_18775 SM00267 diguanylate cyclase CEG15_18785 SM00530 Helix-turn-helix XRE-family like proteins CEG15_18790 SM00267 diguanylate cyclase CEG15_18790 SM01079 CEG15_18790 CEG15_18810 SM00267 diguanylate cyclase CEG15_18825 SM00062 Bacterial periplasmic substrate-binding proteins CEG15_18845 SM00382 ATPases associated with a variety of cellular activities CEG15_18855 SM00062 Bacterial periplasmic substrate-binding proteins CEG15_18855 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CEG15_18920 SM00052 Putative diguanylate phosphodiesterase CEG15_18920 SM00267 diguanylate cyclase CEG15_18950 SM00267 diguanylate cyclase CEG15_18955 SM00382 ATPases associated with a variety of cellular activities CEG15_18980 SM00345 helix_turn_helix gluconate operon transcriptional repressor CEG15_18995 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. CEG15_19015 SM00495 Chitin-binding domain type 3 CEG15_19045 SM00822 CEG15_19045 CEG15_19050 SM00382 ATPases associated with a variety of cellular activities CEG15_19060 SM00342 helix_turn_helix, arabinose operon control protein CEG15_19085 SM00342 helix_turn_helix, arabinose operon control protein CEG15_19120 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEG15_19130 SM01321 CEG15_19130 CEG15_19135 SM00354 helix_turn _helix lactose operon repressor CEG15_19145 SM00382 ATPases associated with a variety of cellular activities CEG15_19165 SM00354 helix_turn _helix lactose operon repressor CEG15_19185 SM00849 Metallo-beta-lactamase superfamily CEG15_19195 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEG15_19195 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEG15_19220 SM01350 CEG15_19220 CEG15_19230 SM00849 Metallo-beta-lactamase superfamily CEG15_19240 SM00354 helix_turn _helix lactose operon repressor CEG15_19260 SM00382 ATPases associated with a variety of cellular activities CEG15_19290 SM00642 Alpha-amylase domain CEG15_19305 SM00421 helix_turn_helix, Lux Regulon CEG15_19315 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEG15_19315 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEG15_19315 SM01049 CEG15_19315 CEG15_19325 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEG15_19345 SM00344 helix_turn_helix ASNC type CEG15_19350 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEG15_19350 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEG15_19375 SM00342 helix_turn_helix, arabinose operon control protein CEG15_19390 SM00421 helix_turn_helix, Lux Regulon CEG15_19410 SM00052 Putative diguanylate phosphodiesterase CEG15_19410 SM00267 diguanylate cyclase CEG15_19415 SM00382 ATPases associated with a variety of cellular activities CEG15_19425 SM00331 Sigma factor PP2C-like phosphatases CEG15_19425 SM00448 cheY-homologous receiver domain CEG15_19435 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEG15_19440 SM00448 cheY-homologous receiver domain CEG15_19450 SM00138 Methyltransferase, chemotaxis proteins CEG15_19455 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEG15_19455 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEG15_19460 SM00260 Two component signalling adaptor domain CEG15_19465 SM00260 Two component signalling adaptor domain CEG15_19470 SM00073 Histidine Phosphotransfer domain CEG15_19470 SM00260 Two component signalling adaptor domain CEG15_19470 SM00387 Histidine kinase-like ATPases CEG15_19470 SM01231 CEG15_19470 CEG15_19475 SM00448 cheY-homologous receiver domain CEG15_19495 SM00470 ParB-like nuclease domain