CMV05_00020 SM01234 CMV05_00020 CMV05_00035 SM00382 ATPases associated with a variety of cellular activities CMV05_00045 SM00062 Bacterial periplasmic substrate-binding proteins CMV05_00050 SM00382 ATPases associated with a variety of cellular activities CMV05_00050 SM00760 Bacterial dnaA protein helix-turn-helix domain CMV05_00055 SM00480 DNA polymerase III beta subunit CMV05_00065 SM00387 Histidine kinase-like ATPases CMV05_00065 SM00433 TopoisomeraseII CMV05_00140 SM00829 Enoylreductase CMV05_00300 SM00257 Lysin motif CMV05_00325 SM01001 AIR carboxylase CMV05_00385 SM00028 Tetratricopeptide repeats CMV05_00410 SM01219 CMV05_00410 CMV05_00445 SM01144 CMV05_00445 CMV05_00470 SM00052 Putative diguanylate phosphodiesterase CMV05_00575 SM00382 ATPases associated with a variety of cellular activities CMV05_00575 SM00962 SRP54-type protein, GTPase domain CMV05_00575 SM00963 SRP54-type protein, helical bundle domain CMV05_00580 SM00382 ATPases associated with a variety of cellular activities CMV05_00595 SM00450 Rhodanese Homology Domain CMV05_00620 SM00563 Phosphate acyltransferases CMV05_00660 SM01038 Beta galactosidase small chain CMV05_00685 SM00360 RNA recognition motif CMV05_00720 SM00052 Putative diguanylate phosphodiesterase CMV05_00720 SM00267 diguanylate cyclase CMV05_00720 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CMV05_00725 SM00382 ATPases associated with a variety of cellular activities CMV05_00725 SM00448 cheY-homologous receiver domain CMV05_00730 SM00091 PAS domain CMV05_00730 SM00387 Histidine kinase-like ATPases CMV05_00730 SM00388 His Kinase A (phosphoacceptor) domain CMV05_00740 SM01230 CMV05_00740 CMV05_00780 SM00363 S4 RNA-binding domain CMV05_00795 SM00382 ATPases associated with a variety of cellular activities CMV05_00875 SM00316 Ribosomal protein S1-like RNA-binding domain CMV05_00875 SM00732 Likely ribonuclease with RNase H fold. CMV05_00920 SM00448 cheY-homologous receiver domain CMV05_00920 SM00862 Transcriptional regulatory protein, C terminal CMV05_00925 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CMV05_00925 SM00387 Histidine kinase-like ATPases CMV05_00925 SM00388 His Kinase A (phosphoacceptor) domain CMV05_00935 SM00487 DEAD-like helicases superfamily CMV05_00935 SM00490 helicase superfamily c-terminal domain CMV05_00940 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CMV05_00940 SM00954 Region found in RelA / SpoT proteins CMV05_00945 SM01409 CMV05_00945 CMV05_00950 SM00072 Guanylate kinase homologues. CMV05_00965 SM00487 DEAD-like helicases superfamily CMV05_00965 SM00490 helicase superfamily c-terminal domain CMV05_00975 SM00357 Cold shock protein domain CMV05_00975 SM00382 ATPases associated with a variety of cellular activities CMV05_00975 SM00959 Rho termination factor, N-terminal domain CMV05_01035 SM00155 Phospholipase D. Active site motifs. CMV05_01090 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CMV05_01090 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CMV05_01095 SM00649 Ribosomal protein L11/L12 CMV05_01120 SM00663 RNA polymerase I subunit A N-terminus CMV05_01190 SM00479 CMV05_01190 CMV05_01245 SM00257 Lysin motif CMV05_01245 SM00646 CMV05_01245 CMV05_01250 SM00853 MutL C terminal dimerisation domain CMV05_01250 SM01340 CMV05_01250 CMV05_01270 SM00244 prohibitin homologues CMV05_01275 SM00244 prohibitin homologues CMV05_01290 SM00320 WD40 repeats CMV05_01330 SM00838 Elongation factor G C-terminus CMV05_01330 SM00889 Elongation factor G, domain IV CMV05_01370 SM00382 ATPases associated with a variety of cellular activities CMV05_01375 SM01005 Alanine racemase, C-terminal domain CMV05_01545 SM01018 B12 binding domain CMV05_01575 SM00116 Domain in cystathionine beta-synthase and other proteins. CMV05_01575 SM00924 MgtE intracellular N domain CMV05_01595 SM00421 helix_turn_helix, Lux Regulon CMV05_01605 SM00052 Putative diguanylate phosphodiesterase CMV05_01605 SM00267 diguanylate cyclase CMV05_01625 SM00965 Secretin and TonB N terminus short domain CMV05_01630 SM00382 ATPases associated with a variety of cellular activities CMV05_01635 SM00028 Tetratricopeptide repeats CMV05_01640 SM00382 ATPases associated with a variety of cellular activities CMV05_01710 SM00316 Ribosomal protein S1-like RNA-binding domain CMV05_01745 SM00857 Resolvase, N terminal domain CMV05_01860 SM00650 Ribosomal RNA adenine dimethylases CMV05_01880 SM00271 DnaJ molecular chaperone homology domain CMV05_01930 SM00478 endonuclease III CMV05_01930 SM00525 CMV05_01930 CMV05_01945 SM00729 Elongator protein 3, MiaB family, Radical SAM CMV05_01960 SM01152 CMV05_01960 CMV05_01990 SM00732 Likely ribonuclease with RNase H fold. CMV05_02015 SM00731 SprT homologues. CMV05_02025 SM00861 Transketolase, pyrimidine binding domain CMV05_02040 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CMV05_02080 SM00091 PAS domain CMV05_02080 SM00267 diguanylate cyclase CMV05_02090 SM00420 helix_turn_helix, Deoxyribose operon repressor CMV05_02090 SM01134 CMV05_02090 CMV05_02215 SM00886 Stress responsive A/B Barrel Domain CMV05_02230 SM00400 zinc finger CMV05_02230 SM00493 CMV05_02230 CMV05_02230 SM00766 DNA primase DnaG DnaB-binding CMV05_02260 SM01207 CMV05_02260 CMV05_02265 SM00905 Dihydroneopterin aldolase CMV05_02310 SM00257 Lysin motif CMV05_02335 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CMV05_02335 SM00534 ATPase domain of DNA mismatch repair MUTS family CMV05_02360 SM00382 ATPases associated with a variety of cellular activities CMV05_02370 SM00382 ATPases associated with a variety of cellular activities CMV05_02380 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CMV05_02455 SM00829 Enoylreductase CMV05_02480 SM01091 Transporter associated domain CMV05_02490 SM00382 ATPases associated with a variety of cellular activities CMV05_02490 SM00962 SRP54-type protein, GTPase domain CMV05_02490 SM00963 SRP54-type protein, helical bundle domain CMV05_02555 SM00644 CMV05_02555 CMV05_02590 SM00345 helix_turn_helix gluconate operon transcriptional repressor CMV05_02590 SM00895 CMV05_02590 CMV05_02635 SM00947 Carbonic anhydrase CMV05_02645 SM00382 ATPases associated with a variety of cellular activities CMV05_02695 SM00487 DEAD-like helicases superfamily CMV05_02695 SM00490 helicase superfamily c-terminal domain CMV05_02695 SM00847 Helicase associated domain (HA2) Add an annotation CMV05_02735 SM00938 Nitrogen regulatory protein P-II CMV05_02755 SM00382 ATPases associated with a variety of cellular activities CMV05_02765 SM01068 Putative carbohydrate binding domain CMV05_02785 SM00382 ATPases associated with a variety of cellular activities CMV05_02790 SM00382 ATPases associated with a variety of cellular activities CMV05_02810 SM00091 PAS domain CMV05_02810 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CMV05_02810 SM00387 Histidine kinase-like ATPases CMV05_02810 SM00388 His Kinase A (phosphoacceptor) domain CMV05_02810 SM00448 cheY-homologous receiver domain CMV05_02880 SM01103 CMV05_02880 CMV05_02890 SM00382 ATPases associated with a variety of cellular activities CMV05_02925 SM00316 Ribosomal protein S1-like RNA-binding domain CMV05_02925 SM00322 K homology RNA-binding domain CMV05_02945 SM01387 CMV05_02945 CMV05_02950 SM00316 Ribosomal protein S1-like RNA-binding domain CMV05_02950 SM00322 K homology RNA-binding domain CMV05_02955 SM00028 Tetratricopeptide repeats CMV05_02960 SM00347 helix_turn_helix multiple antibiotic resistance protein CMV05_02980 SM00052 Putative diguanylate phosphodiesterase CMV05_02980 SM00091 PAS domain CMV05_02980 SM00267 diguanylate cyclase CMV05_03045 SM00530 Helix-turn-helix XRE-family like proteins CMV05_03080 SM00530 Helix-turn-helix XRE-family like proteins CMV05_03115 SM01126 CMV05_03115 CMV05_03120 SM00479 CMV05_03120 CMV05_03160 SM00220 Serine/Threonine protein kinases, catalytic domain CMV05_03175 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CMV05_03310 SM00382 ATPases associated with a variety of cellular activities CMV05_03330 SM00327 von Willebrand factor (vWF) type A domain CMV05_03425 SM00530 Helix-turn-helix XRE-family like proteins CMV05_03435 SM00487 DEAD-like helicases superfamily CMV05_03435 SM00490 helicase superfamily c-terminal domain CMV05_03460 SM00382 ATPases associated with a variety of cellular activities CMV05_03475 SM00927 DNA mismatch repair enzyme MutH CMV05_03485 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CMV05_03565 SM00530 Helix-turn-helix XRE-family like proteins CMV05_03615 SM00382 ATPases associated with a variety of cellular activities CMV05_03630 SM00736 Dystroglycan-type cadherin-like domains. CMV05_03685 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CMV05_03700 SM00904 Riboflavin kinase CMV05_03750 SM00448 cheY-homologous receiver domain CMV05_03750 SM00850 LytTr DNA-binding domain CMV05_03765 SM00830 Chorismate mutase type II CMV05_03775 SM00382 ATPases associated with a variety of cellular activities CMV05_03795 SM00052 Putative diguanylate phosphodiesterase CMV05_03795 SM00267 diguanylate cyclase CMV05_03805 SM00830 Chorismate mutase type II CMV05_03820 SM00363 S4 RNA-binding domain CMV05_03830 SM00382 ATPases associated with a variety of cellular activities CMV05_03830 SM01086 C-terminal, D2-small domain, of ClpB protein CMV05_03920 SM00448 cheY-homologous receiver domain CMV05_03920 SM00862 Transcriptional regulatory protein, C terminal CMV05_03925 SM00091 PAS domain CMV05_03925 SM00387 Histidine kinase-like ATPases CMV05_03925 SM00388 His Kinase A (phosphoacceptor) domain CMV05_03955 SM00382 ATPases associated with a variety of cellular activities CMV05_03990 SM00116 Domain in cystathionine beta-synthase and other proteins. CMV05_04005 SM01323 CMV05_04005 CMV05_04050 SM00271 DnaJ molecular chaperone homology domain CMV05_04075 SM00562 CMV05_04075 CMV05_04105 SM00564 beta-propeller repeat CMV05_04110 SM00382 ATPases associated with a variety of cellular activities CMV05_04130 SM00116 Domain in cystathionine beta-synthase and other proteins. CMV05_04130 SM01240 CMV05_04130 CMV05_04255 SM01130 CMV05_04255 CMV05_04355 SM00420 helix_turn_helix, Deoxyribose operon repressor CMV05_04355 SM01134 CMV05_04355 CMV05_04360 SM00420 helix_turn_helix, Deoxyribose operon repressor CMV05_04360 SM01134 CMV05_04360 CMV05_04500 SM00271 DnaJ molecular chaperone homology domain CMV05_04540 SM00829 Enoylreductase CMV05_04565 SM01211 CMV05_04565 CMV05_04645 SM00861 Transketolase, pyrimidine binding domain CMV05_04670 SM00981 CMV05_04670 CMV05_04690 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CMV05_04690 SM00475 5'-3' exonuclease CMV05_04700 SM00267 diguanylate cyclase CMV05_04705 SM00028 Tetratricopeptide repeats CMV05_04735 SM00382 ATPases associated with a variety of cellular activities CMV05_04735 SM00930 CMV05_04735 CMV05_04750 SM00354 helix_turn _helix lactose operon repressor CMV05_04760 SM00642 Alpha-amylase domain CMV05_04765 SM00448 cheY-homologous receiver domain CMV05_04765 SM00862 Transcriptional regulatory protein, C terminal CMV05_04770 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CMV05_04770 SM00387 Histidine kinase-like ATPases CMV05_04770 SM00388 His Kinase A (phosphoacceptor) domain CMV05_04810 SM00226 Low molecular weight phosphatase family CMV05_04820 SM00984 UDP binding domain CMV05_04825 SM00984 UDP binding domain CMV05_04960 SM00729 Elongator protein 3, MiaB family, Radical SAM CMV05_04975 SM00936 Penicillin-binding protein 5, C-terminal domain CMV05_05030 SM00116 Domain in cystathionine beta-synthase and other proteins. CMV05_05030 SM01091 Transporter associated domain CMV05_05045 SM00729 Elongator protein 3, MiaB family, Radical SAM CMV05_05080 SM00771 ZipA, C-terminal domain (FtsZ-binding) CMV05_05085 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CMV05_05085 SM00292 breast cancer carboxy-terminal domain CMV05_05085 SM00532 Ligase N family CMV05_05100 SM00422 helix_turn_helix, mercury resistance CMV05_05110 SM00244 prohibitin homologues CMV05_05145 SM00862 Transcriptional regulatory protein, C terminal CMV05_05150 SM00387 Histidine kinase-like ATPases CMV05_05185 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CMV05_05260 SM00479 CMV05_05260 CMV05_05275 SM00478 endonuclease III CMV05_05275 SM00525 CMV05_05275 CMV05_05285 SM00900 CMV05_05285 CMV05_05325 SM00923 MbtH-like protein CMV05_05330 SM00823 Phosphopantetheine attachment site CMV05_05330 SM00824 Thioesterase CMV05_05515 SM00487 DEAD-like helicases superfamily CMV05_05515 SM00490 helicase superfamily c-terminal domain CMV05_05515 SM00982 CMV05_05515 CMV05_05515 SM01058 CarD-like/TRCF domain CMV05_05530 SM00382 ATPases associated with a variety of cellular activities CMV05_05545 SM00849 Metallo-beta-lactamase superfamily CMV05_05550 SM00382 ATPases associated with a variety of cellular activities CMV05_05580 SM00763 PrkA AAA domain CMV05_05640 SM00062 Bacterial periplasmic substrate-binding proteins CMV05_05640 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CMV05_05660 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CMV05_05660 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CMV05_05680 SM00491 CMV05_05680 CMV05_05700 SM00052 Putative diguanylate phosphodiesterase CMV05_05715 SM00840 CMV05_05715 CMV05_05725 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CMV05_05730 SM00382 ATPases associated with a variety of cellular activities CMV05_05785 SM00028 Tetratricopeptide repeats CMV05_05800 SM00387 Histidine kinase-like ATPases CMV05_05800 SM00388 His Kinase A (phosphoacceptor) domain CMV05_05800 SM00448 cheY-homologous receiver domain CMV05_05845 SM00267 diguanylate cyclase CMV05_05890 SM00671 Sel1-like repeats. CMV05_05940 SM00345 helix_turn_helix gluconate operon transcriptional repressor CMV05_05940 SM00866 CMV05_05940 CMV05_05945 SM01022 CMV05_05945 CMV05_05955 SM00841 Elongation factor P, C-terminal CMV05_05955 SM01185 CMV05_05955 CMV05_05965 SM00486 DNA polymerase type-B family CMV05_05970 SM00421 helix_turn_helix, Lux Regulon CMV05_05970 SM00448 cheY-homologous receiver domain CMV05_05975 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CMV05_05975 SM00465 GIY-YIG type nucleases (URI domain) CMV05_06030 SM00873 B3/4 domain CMV05_06030 SM00874 tRNA synthetase B5 domain CMV05_06030 SM00896 Ferredoxin-fold anticodon binding domain CMV05_06035 SM00411 bacterial (prokaryotic) histone like domain CMV05_06050 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CMV05_06050 SM00091 PAS domain CMV05_06050 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CMV05_06080 SM00479 CMV05_06080 CMV05_06090 SM00382 ATPases associated with a variety of cellular activities CMV05_06150 SM00855 Phosphoglycerate mutase family CMV05_06165 SM00382 ATPases associated with a variety of cellular activities CMV05_06210 SM00028 Tetratricopeptide repeats CMV05_06210 SM00386 HAT (Half-A-TPR) repeats CMV05_06250 SM00387 Histidine kinase-like ATPases CMV05_06255 SM00448 cheY-homologous receiver domain CMV05_06260 SM00062 Bacterial periplasmic substrate-binding proteins CMV05_06285 SM00642 Alpha-amylase domain CMV05_06295 SM00267 diguanylate cyclase CMV05_06310 SM00530 Helix-turn-helix XRE-family like proteins CMV05_06395 SM00382 ATPases associated with a variety of cellular activities CMV05_06395 SM01086 C-terminal, D2-small domain, of ClpB protein CMV05_06420 SM00240 Forkhead associated domain CMV05_06445 SM00220 Serine/Threonine protein kinases, catalytic domain CMV05_06465 SM00862 Transcriptional regulatory protein, C terminal CMV05_06475 SM00862 Transcriptional regulatory protein, C terminal CMV05_06485 SM00342 helix_turn_helix, arabinose operon control protein CMV05_06550 SM00357 Cold shock protein domain CMV05_06560 SM00382 ATPases associated with a variety of cellular activities CMV05_06560 SM01086 C-terminal, D2-small domain, of ClpB protein CMV05_06565 SM00316 Ribosomal protein S1-like RNA-binding domain CMV05_06590 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CMV05_06590 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CMV05_06590 SM00493 CMV05_06590 CMV05_06625 SM00354 helix_turn _helix lactose operon repressor CMV05_06635 SM00448 cheY-homologous receiver domain CMV05_06635 SM00862 Transcriptional regulatory protein, C terminal CMV05_06765 SM01131 CMV05_06765 CMV05_06780 SM00342 helix_turn_helix, arabinose operon control protein CMV05_06785 SM00382 ATPases associated with a variety of cellular activities CMV05_06790 SM00382 ATPases associated with a variety of cellular activities CMV05_06810 SM00382 ATPases associated with a variety of cellular activities CMV05_06840 SM00155 Phospholipase D. Active site motifs. CMV05_06880 SM00382 ATPases associated with a variety of cellular activities CMV05_06920 SM00487 DEAD-like helicases superfamily CMV05_06920 SM00490 helicase superfamily c-terminal domain CMV05_06940 SM00387 Histidine kinase-like ATPases CMV05_06945 SM00448 cheY-homologous receiver domain CMV05_06945 SM00862 Transcriptional regulatory protein, C terminal CMV05_06955 SM00487 DEAD-like helicases superfamily CMV05_06955 SM00490 helicase superfamily c-terminal domain CMV05_06960 SM00363 S4 RNA-binding domain CMV05_06995 SM00382 ATPases associated with a variety of cellular activities CMV05_07075 SM00852 Probable molybdopterin binding domain CMV05_07105 SM00434 DNA Topoisomerase IV CMV05_07110 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CMV05_07130 SM00764 Citrate lyase ligase C-terminal domain CMV05_07160 SM00387 Histidine kinase-like ATPases CMV05_07165 SM00448 cheY-homologous receiver domain CMV05_07235 SM00342 helix_turn_helix, arabinose operon control protein CMV05_07320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CMV05_07320 SM00387 Histidine kinase-like ATPases CMV05_07320 SM00388 His Kinase A (phosphoacceptor) domain CMV05_07325 SM00448 cheY-homologous receiver domain CMV05_07325 SM00862 Transcriptional regulatory protein, C terminal CMV05_07350 SM00345 helix_turn_helix gluconate operon transcriptional repressor CMV05_07350 SM00895 CMV05_07350 CMV05_07580 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CMV05_07615 SM00382 ATPases associated with a variety of cellular activities CMV05_07630 SM00062 Bacterial periplasmic substrate-binding proteins CMV05_07690 SM00316 Ribosomal protein S1-like RNA-binding domain CMV05_07710 SM00382 ATPases associated with a variety of cellular activities CMV05_07720 SM00945 ProQ/FINO family CMV05_07725 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CMV05_07725 SM00245 tail specific protease CMV05_07765 SM00981 CMV05_07765 CMV05_07775 SM00382 ATPases associated with a variety of cellular activities CMV05_07850 SM00479 CMV05_07850 CMV05_07905 SM00530 Helix-turn-helix XRE-family like proteins CMV05_07935 SM00530 Helix-turn-helix XRE-family like proteins CMV05_08005 SM00857 Resolvase, N terminal domain CMV05_08165 SM00100 Cyclic nucleotide-monophosphate binding domain CMV05_08165 SM00419 helix_turn_helix, cAMP Regulatory protein CMV05_08195 SM00382 ATPases associated with a variety of cellular activities CMV05_08230 SM00382 ATPases associated with a variety of cellular activities CMV05_08235 SM00421 helix_turn_helix, Lux Regulon CMV05_08235 SM00448 cheY-homologous receiver domain CMV05_08240 SM00387 Histidine kinase-like ATPases CMV05_08260 SM00382 ATPases associated with a variety of cellular activities CMV05_08290 SM01144 CMV05_08290 CMV05_08300 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CMV05_08385 SM00849 Metallo-beta-lactamase superfamily CMV05_08470 SM00382 ATPases associated with a variety of cellular activities CMV05_08470 SM00487 DEAD-like helicases superfamily CMV05_08470 SM00490 helicase superfamily c-terminal domain CMV05_08470 SM00847 Helicase associated domain (HA2) Add an annotation CMV05_08485 SM00479 CMV05_08485 CMV05_08490 SM00267 diguanylate cyclase CMV05_08490 SM01079 CMV05_08490 CMV05_08535 SM00354 helix_turn _helix lactose operon repressor CMV05_08545 SM00487 DEAD-like helicases superfamily CMV05_08545 SM00490 helicase superfamily c-terminal domain CMV05_08560 SM00357 Cold shock protein domain CMV05_08570 SM00448 cheY-homologous receiver domain CMV05_08575 SM00387 Histidine kinase-like ATPases CMV05_08585 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CMV05_08585 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CMV05_08590 SM01005 Alanine racemase, C-terminal domain CMV05_08610 SM00267 diguanylate cyclase CMV05_08625 SM00091 PAS domain CMV05_08625 SM00382 ATPases associated with a variety of cellular activities CMV05_08685 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CMV05_08685 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CMV05_08700 SM00448 cheY-homologous receiver domain CMV05_08710 SM00138 Methyltransferase, chemotaxis proteins CMV05_08715 SM00260 Two component signalling adaptor domain CMV05_08720 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CMV05_08720 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CMV05_08725 SM00073 Histidine Phosphotransfer domain CMV05_08725 SM00260 Two component signalling adaptor domain CMV05_08725 SM00387 Histidine kinase-like ATPases CMV05_08725 SM01231 CMV05_08725 CMV05_08735 SM00448 cheY-homologous receiver domain CMV05_08740 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CMV05_08745 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CMV05_08755 SM00100 Cyclic nucleotide-monophosphate binding domain CMV05_08755 SM00116 Domain in cystathionine beta-synthase and other proteins. CMV05_08760 SM00479 CMV05_08760 CMV05_08765 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CMV05_08765 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CMV05_08775 SM00347 helix_turn_helix multiple antibiotic resistance protein CMV05_08790 SM00849 Metallo-beta-lactamase superfamily CMV05_08850 SM00729 Elongator protein 3, MiaB family, Radical SAM CMV05_08880 SM00382 ATPases associated with a variety of cellular activities CMV05_08885 SM00450 Rhodanese Homology Domain CMV05_08890 SM00062 Bacterial periplasmic substrate-binding proteins CMV05_08895 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CMV05_08895 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CMV05_08900 SM00640 Glycosyl hydrolases family 32 CMV05_08905 SM00354 helix_turn _helix lactose operon repressor CMV05_08920 SM00052 Putative diguanylate phosphodiesterase CMV05_08975 SM00528 Domain in histone-like proteins of HNS family CMV05_09015 SM00387 Histidine kinase-like ATPases CMV05_09020 SM00448 cheY-homologous receiver domain CMV05_09085 SM00919 Malic enzyme, NAD binding domain CMV05_09085 SM01274 CMV05_09085 CMV05_09110 SM00267 diguanylate cyclase CMV05_09120 SM00382 ATPases associated with a variety of cellular activities CMV05_09125 SM00382 ATPases associated with a variety of cellular activities CMV05_09130 SM00052 Putative diguanylate phosphodiesterase CMV05_09130 SM00267 diguanylate cyclase CMV05_09135 SM00363 S4 RNA-binding domain CMV05_09145 SM00481 DNA polymerase alpha chain like domain CMV05_09240 SM00052 Putative diguanylate phosphodiesterase CMV05_09240 SM00091 PAS domain CMV05_09245 SM00020 Trypsin-like serine protease CMV05_09250 SM00729 Elongator protein 3, MiaB family, Radical SAM CMV05_09305 SM00843 CMV05_09305 CMV05_09310 SM00344 helix_turn_helix ASNC type CMV05_09315 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CMV05_09315 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CMV05_09335 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CMV05_09340 SM00028 Tetratricopeptide repeats CMV05_09350 SM00411 bacterial (prokaryotic) histone like domain CMV05_09355 SM00316 Ribosomal protein S1-like RNA-binding domain CMV05_09375 SM00411 bacterial (prokaryotic) histone like domain CMV05_09380 SM00382 ATPases associated with a variety of cellular activities CMV05_09380 SM00464 Found in ATP-dependent protease La (LON) CMV05_09385 SM00382 ATPases associated with a variety of cellular activities CMV05_09385 SM00994 ClpX C4-type zinc finger CMV05_09385 SM01086 C-terminal, D2-small domain, of ClpB protein CMV05_09405 SM00387 Histidine kinase-like ATPases CMV05_09405 SM00388 His Kinase A (phosphoacceptor) domain CMV05_09410 SM00382 ATPases associated with a variety of cellular activities CMV05_09410 SM00448 cheY-homologous receiver domain CMV05_09440 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CMV05_09440 SM00387 Histidine kinase-like ATPases CMV05_09445 SM00448 cheY-homologous receiver domain CMV05_09445 SM00862 Transcriptional regulatory protein, C terminal CMV05_09465 SM00487 DEAD-like helicases superfamily CMV05_09465 SM00490 helicase superfamily c-terminal domain CMV05_09470 SM00642 Alpha-amylase domain CMV05_09510 SM00495 Chitin-binding domain type 3 CMV05_09510 SM00636 CMV05_09510 CMV05_09550 SM00474 3'-5' exonuclease CMV05_09580 SM00487 DEAD-like helicases superfamily CMV05_09580 SM00491 CMV05_09580 CMV05_09605 SM00870 CMV05_09605 CMV05_09625 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CMV05_09715 SM00493 CMV05_09715 CMV05_09725 SM00382 ATPases associated with a variety of cellular activities CMV05_09745 SM00448 cheY-homologous receiver domain CMV05_09840 SM00116 Domain in cystathionine beta-synthase and other proteins. CMV05_09920 SM00852 Probable molybdopterin binding domain CMV05_09925 SM00729 Elongator protein 3, MiaB family, Radical SAM CMV05_09940 SM00382 ATPases associated with a variety of cellular activities CMV05_09940 SM00448 cheY-homologous receiver domain CMV05_09945 SM00487 DEAD-like helicases superfamily CMV05_09945 SM00490 helicase superfamily c-terminal domain CMV05_10035 SM00507 HNH nucleases CMV05_10065 SM00345 helix_turn_helix gluconate operon transcriptional repressor CMV05_10095 SM00729 Elongator protein 3, MiaB family, Radical SAM CMV05_10095 SM00876 Biotin and Thiamin Synthesis associated domain CMV05_10110 SM00382 ATPases associated with a variety of cellular activities CMV05_10130 SM00382 ATPases associated with a variety of cellular activities CMV05_10165 SM00382 ATPases associated with a variety of cellular activities CMV05_10170 SM00382 ATPases associated with a variety of cellular activities CMV05_10190 SM00052 Putative diguanylate phosphodiesterase CMV05_10190 SM00421 helix_turn_helix, Lux Regulon CMV05_10190 SM00448 cheY-homologous receiver domain CMV05_10195 SM00062 Bacterial periplasmic substrate-binding proteins CMV05_10195 SM00387 Histidine kinase-like ATPases CMV05_10195 SM00388 His Kinase A (phosphoacceptor) domain CMV05_10195 SM00448 cheY-homologous receiver domain CMV05_10235 SM00354 helix_turn _helix lactose operon repressor CMV05_10250 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CMV05_10250 SM00387 Histidine kinase-like ATPases CMV05_10250 SM00388 His Kinase A (phosphoacceptor) domain CMV05_10255 SM00448 cheY-homologous receiver domain CMV05_10255 SM00862 Transcriptional regulatory protein, C terminal CMV05_10270 SM00344 helix_turn_helix ASNC type CMV05_10280 SM00387 Histidine kinase-like ATPases CMV05_10280 SM00388 His Kinase A (phosphoacceptor) domain CMV05_10285 SM00448 cheY-homologous receiver domain CMV05_10285 SM00862 Transcriptional regulatory protein, C terminal CMV05_10300 SM01236 CMV05_10300 CMV05_10370 SM00857 Resolvase, N terminal domain CMV05_10375 SM00530 Helix-turn-helix XRE-family like proteins CMV05_10415 SM00062 Bacterial periplasmic substrate-binding proteins CMV05_10415 SM00267 diguanylate cyclase CMV05_10445 SM00344 helix_turn_helix ASNC type CMV05_10455 SM00978 CMV05_10455 CMV05_10465 SM00563 Phosphate acyltransferases CMV05_10485 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CMV05_10525 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CMV05_10530 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CMV05_10535 SM01144 CMV05_10535 CMV05_10555 SM00260 Two component signalling adaptor domain CMV05_10555 SM00448 cheY-homologous receiver domain CMV05_10630 SM00825 Beta-ketoacyl synthase CMV05_10640 SM00822 CMV05_10640 CMV05_10645 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CMV05_10675 SM00363 S4 RNA-binding domain CMV05_10680 SM00316 Ribosomal protein S1-like RNA-binding domain CMV05_10700 SM00859 Semialdehyde dehydrogenase, NAD binding domain CMV05_10760 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CMV05_10760 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CMV05_10760 SM00493 CMV05_10760 CMV05_10830 SM00382 ATPases associated with a variety of cellular activities CMV05_10840 SM00260 Two component signalling adaptor domain CMV05_10845 SM00260 Two component signalling adaptor domain CMV05_10855 SM00448 cheY-homologous receiver domain CMV05_10860 SM00073 Histidine Phosphotransfer domain CMV05_10860 SM00260 Two component signalling adaptor domain CMV05_10860 SM00387 Histidine kinase-like ATPases CMV05_10860 SM01231 CMV05_10860 CMV05_10870 SM00448 cheY-homologous receiver domain CMV05_10885 SM00382 ATPases associated with a variety of cellular activities CMV05_10885 SM00962 SRP54-type protein, GTPase domain CMV05_10895 SM00855 Phosphoglycerate mutase family CMV05_10910 SM00836 DALR anticodon binding domain CMV05_10910 SM01016 Arginyl tRNA synthetase N terminal dom CMV05_10930 SM00899 CMV05_10930 CMV05_10940 SM00342 helix_turn_helix, arabinose operon control protein CMV05_10950 SM00382 ATPases associated with a variety of cellular activities CMV05_10960 SM00881 CoA binding domain CMV05_10975 SM00861 Transketolase, pyrimidine binding domain CMV05_11065 SM00859 Semialdehyde dehydrogenase, NAD binding domain CMV05_11075 SM00825 Beta-ketoacyl synthase CMV05_11125 SM00463 Small MutS-related domain CMV05_11180 SM00382 ATPases associated with a variety of cellular activities CMV05_11205 SM00382 ATPases associated with a variety of cellular activities CMV05_11205 SM00448 cheY-homologous receiver domain CMV05_11210 SM00091 PAS domain CMV05_11210 SM00387 Histidine kinase-like ATPases CMV05_11210 SM00388 His Kinase A (phosphoacceptor) domain CMV05_11215 SM00382 ATPases associated with a variety of cellular activities CMV05_11305 SM01130 CMV05_11305 CMV05_11355 SM00857 Resolvase, N terminal domain CMV05_11390 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CMV05_11390 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CMV05_11470 SM00937 CMV05_11470 CMV05_11490 SM01400 CMV05_11490 CMV05_11610 SM00047 Lysozyme subfamily 2 CMV05_11655 SM00138 Methyltransferase, chemotaxis proteins CMV05_11660 SM00260 Two component signalling adaptor domain CMV05_11660 SM00448 cheY-homologous receiver domain CMV05_11665 SM00858 CMV05_11665 CMV05_11725 SM01081 Putative carbohydrate binding domain CMV05_11740 SM00363 S4 RNA-binding domain CMV05_11780 SM00479 CMV05_11780 CMV05_11795 SM00849 Metallo-beta-lactamase superfamily CMV05_11800 SM00257 Lysin motif CMV05_11815 SM00938 Nitrogen regulatory protein P-II CMV05_11825 SM00977 TilS substrate C-terminal domain CMV05_11835 SM00481 DNA polymerase alpha chain like domain CMV05_11865 SM00935 Outer membrane protein (OmpH-like) CMV05_11875 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CMV05_11920 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CMV05_11990 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CMV05_12040 SM00267 diguanylate cyclase CMV05_12055 SM01126 CMV05_12055 CMV05_12085 SM00900 CMV05_12085 CMV05_12140 SM00464 Found in ATP-dependent protease La (LON) CMV05_12175 SM00925 MltA specific insert domain CMV05_12270 SM00354 helix_turn _helix lactose operon repressor CMV05_12315 SM00838 Elongation factor G C-terminus CMV05_12315 SM00889 Elongation factor G, domain IV CMV05_12320 SM00382 ATPases associated with a variety of cellular activities CMV05_12350 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CMV05_12355 SM01133 CMV05_12355 CMV05_12390 SM00986 Uracil DNA glycosylase superfamily CMV05_12390 SM00987 UreE urease accessory protein, C-terminal domain CMV05_12395 SM00518 AP endonuclease family 2 CMV05_12430 SM00448 cheY-homologous receiver domain CMV05_12430 SM00862 Transcriptional regulatory protein, C terminal CMV05_12440 SM00073 Histidine Phosphotransfer domain CMV05_12440 SM00091 PAS domain CMV05_12440 SM00387 Histidine kinase-like ATPases CMV05_12440 SM00388 His Kinase A (phosphoacceptor) domain CMV05_12440 SM00448 cheY-homologous receiver domain CMV05_12445 SM00729 Elongator protein 3, MiaB family, Radical SAM CMV05_12510 SM00851 MGS-like domain CMV05_12510 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CMV05_12515 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CMV05_12530 SM00957 SecA DEAD-like domain CMV05_12530 SM00958 SecA preprotein cross-linking domain CMV05_12545 SM00864 Tubulin/FtsZ family, GTPase domain CMV05_12545 SM00865 Tubulin/FtsZ family, C-terminal domain CMV05_12550 SM00842 Cell division protein FtsA CMV05_12635 SM00749 bacterial OsmY and nodulation domain CMV05_12690 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CMV05_12695 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CMV05_12700 SM00434 DNA Topoisomerase IV CMV05_12705 SM00387 Histidine kinase-like ATPases CMV05_12705 SM00433 TopoisomeraseII CMV05_12750 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CMV05_12760 SM00880 CMV05_12760 CMV05_12760 SM01118 CMV05_12760 CMV05_12775 SM00287 Bacterial SH3 domain homologues CMV05_12785 SM00382 ATPases associated with a variety of cellular activities CMV05_12795 SM01192 CMV05_12795 CMV05_12795 SM01193 CMV05_12795 CMV05_12810 SM00954 Region found in RelA / SpoT proteins CMV05_12820 SM00073 Histidine Phosphotransfer domain CMV05_12820 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CMV05_12820 SM00387 Histidine kinase-like ATPases CMV05_12820 SM00388 His Kinase A (phosphoacceptor) domain CMV05_12820 SM00448 cheY-homologous receiver domain CMV05_12845 SM00358 Double-stranded RNA binding motif CMV05_12845 SM00535 Ribonuclease III family CMV05_12985 SM00014 Acid phosphatase homologues CMV05_12990 SM00917 LeuA allosteric (dimerisation) domain CMV05_12995 SM01329 CMV05_12995 CMV05_13155 SM00487 DEAD-like helicases superfamily CMV05_13155 SM00490 helicase superfamily c-terminal domain CMV05_13165 SM00670 Large family of predicted nucleotide-binding domains CMV05_13190 SM00989 CMV05_13190 CMV05_13195 SM00387 Histidine kinase-like ATPases CMV05_13200 SM00563 Phosphate acyltransferases CMV05_13235 SM00382 ATPases associated with a variety of cellular activities CMV05_13245 SM00116 Domain in cystathionine beta-synthase and other proteins. CMV05_13265 SM00382 ATPases associated with a variety of cellular activities CMV05_13295 SM00116 Domain in cystathionine beta-synthase and other proteins. CMV05_13295 SM00924 MgtE intracellular N domain CMV05_13310 SM00382 ATPases associated with a variety of cellular activities CMV05_13400 SM00382 ATPases associated with a variety of cellular activities CMV05_13480 SM00563 Phosphate acyltransferases CMV05_13485 SM00487 DEAD-like helicases superfamily CMV05_13485 SM00490 helicase superfamily c-terminal domain CMV05_13510 SM00662 RNA polymerases D CMV05_13515 SM00363 S4 RNA-binding domain CMV05_13515 SM01390 CMV05_13515 CMV05_13580 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CMV05_13585 SM01374 CMV05_13585 CMV05_13605 SM00322 K homology RNA-binding domain CMV05_13620 SM01382 CMV05_13620 CMV05_13620 SM01383 CMV05_13620 CMV05_13640 SM01403 CMV05_13640 CMV05_13645 SM00967 RNA 2'-O ribose methyltransferase substrate binding CMV05_13650 SM00316 Ribosomal protein S1-like RNA-binding domain CMV05_13650 SM00357 Cold shock protein domain CMV05_13650 SM00955 CMV05_13650 CMV05_13655 SM00671 Sel1-like repeats. CMV05_13665 SM00788 Adenylosuccinate synthetase CMV05_13695 SM00382 ATPases associated with a variety of cellular activities CMV05_13720 SM00100 Cyclic nucleotide-monophosphate binding domain CMV05_13720 SM00419 helix_turn_helix, cAMP Regulatory protein CMV05_13725 SM01150 CMV05_13725 CMV05_13825 SM00965 Secretin and TonB N terminus short domain CMV05_13890 SM00859 Semialdehyde dehydrogenase, NAD binding domain CMV05_13910 SM00971 Serine acetyltransferase, N-terminal CMV05_13925 SM00450 Rhodanese Homology Domain CMV05_13955 SM00841 Elongation factor P, C-terminal CMV05_13955 SM01185 CMV05_13955 CMV05_13980 SM00883 Chaperonin 10 Kd subunit CMV05_14025 SM00382 ATPases associated with a variety of cellular activities CMV05_14025 SM01086 C-terminal, D2-small domain, of ClpB protein CMV05_14040 SM00354 helix_turn _helix lactose operon repressor CMV05_14045 SM00487 DEAD-like helicases superfamily CMV05_14045 SM00490 helicase superfamily c-terminal domain CMV05_14060 SM00919 Malic enzyme, NAD binding domain CMV05_14060 SM01274 CMV05_14060 CMV05_14130 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CMV05_14130 SM00387 Histidine kinase-like ATPases CMV05_14130 SM00388 His Kinase A (phosphoacceptor) domain CMV05_14140 SM00357 Cold shock protein domain CMV05_14205 SM00421 helix_turn_helix, Lux Regulon CMV05_14205 SM00448 cheY-homologous receiver domain CMV05_14210 SM01091 Transporter associated domain CMV05_14225 SM00387 Histidine kinase-like ATPases CMV05_14225 SM00388 His Kinase A (phosphoacceptor) domain CMV05_14225 SM00448 cheY-homologous receiver domain CMV05_14240 SM00479 CMV05_14240 CMV05_14260 SM00878 Biotin carboxylase C-terminal domain CMV05_14280 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CMV05_14280 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CMV05_14280 SM01049 CMV05_14280 CMV05_14285 SM00422 helix_turn_helix, mercury resistance CMV05_14290 SM00798 AICARFT/IMPCHase bienzyme CMV05_14290 SM00851 MGS-like domain CMV05_14295 SM01209 CMV05_14295 CMV05_14295 SM01210 CMV05_14295 CMV05_14305 SM00411 bacterial (prokaryotic) histone like domain CMV05_14370 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CMV05_14370 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CMV05_14515 SM00984 UDP binding domain CMV05_14655 SM00257 Lysin motif CMV05_14810 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CMV05_14810 SM01232 CMV05_14810 CMV05_14925 SM00382 ATPases associated with a variety of cellular activities CMV05_14935 SM00382 ATPases associated with a variety of cellular activities CMV05_14965 SM00341 Helicase and RNase D C-terminal CMV05_14965 SM00487 DEAD-like helicases superfamily CMV05_14965 SM00490 helicase superfamily c-terminal domain CMV05_14965 SM00956 CMV05_14965 CMV05_15045 SM00382 ATPases associated with a variety of cellular activities CMV05_15075 SM00382 ATPases associated with a variety of cellular activities CMV05_15080 SM00382 ATPases associated with a variety of cellular activities CMV05_15145 SM00448 cheY-homologous receiver domain CMV05_15175 SM00382 ATPases associated with a variety of cellular activities CMV05_15250 SM00729 Elongator protein 3, MiaB family, Radical SAM CMV05_15280 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CMV05_15280 SM00474 3'-5' exonuclease CMV05_15280 SM00475 5'-3' exonuclease CMV05_15280 SM00482 DNA polymerase A domain CMV05_15285 SM01004 Delta-aminolevulinic acid dehydratase CMV05_15340 SM00342 helix_turn_helix, arabinose operon control protein CMV05_15355 SM01007 Class II Aldolase and Adducin N-terminal domain CMV05_15375 SM00382 ATPases associated with a variety of cellular activities CMV05_15470 SM00344 helix_turn_helix ASNC type CMV05_15500 SM00876 Biotin and Thiamin Synthesis associated domain CMV05_15625 SM00382 ATPases associated with a variety of cellular activities CMV05_15665 SM00470 ParB-like nuclease domain CMV05_15680 SM01228 CMV05_15680 CMV05_15735 SM00849 Metallo-beta-lactamase superfamily CMV05_15750 SM00342 helix_turn_helix, arabinose operon control protein CMV05_15750 SM00478 endonuclease III CMV05_15750 SM01009 AlkA N-terminal domain CMV05_15840 SM00347 helix_turn_helix multiple antibiotic resistance protein CMV05_15855 SM00052 Putative diguanylate phosphodiesterase CMV05_15865 SM00450 Rhodanese Homology Domain CMV05_15875 SM00382 ATPases associated with a variety of cellular activities CMV05_15890 SM00382 ATPases associated with a variety of cellular activities CMV05_15915 SM00345 helix_turn_helix gluconate operon transcriptional repressor CMV05_15915 SM00866 CMV05_15915 CMV05_15920 SM00487 DEAD-like helicases superfamily CMV05_15920 SM00490 helicase superfamily c-terminal domain CMV05_15955 SM00829 Enoylreductase CMV05_15975 SM00448 cheY-homologous receiver domain CMV05_15975 SM00862 Transcriptional regulatory protein, C terminal CMV05_15980 SM00387 Histidine kinase-like ATPases CMV05_16035 SM00382 ATPases associated with a variety of cellular activities CMV05_16035 SM01086 C-terminal, D2-small domain, of ClpB protein CMV05_16040 SM00382 ATPases associated with a variety of cellular activities CMV05_16145 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins CMV05_16145 SM00495 Chitin-binding domain type 3 CMV05_16145 SM00636 CMV05_16145 CMV05_16150 SM00345 helix_turn_helix gluconate operon transcriptional repressor CMV05_16155 SM00382 ATPases associated with a variety of cellular activities CMV05_16185 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CMV05_16185 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CMV05_16195 SM00849 Metallo-beta-lactamase superfamily CMV05_16215 SM00354 helix_turn _helix lactose operon repressor CMV05_16235 SM00382 ATPases associated with a variety of cellular activities CMV05_16245 SM00354 helix_turn _helix lactose operon repressor CMV05_16290 SM00347 helix_turn_helix multiple antibiotic resistance protein CMV05_16305 SM00342 helix_turn_helix, arabinose operon control protein CMV05_16390 SM00382 ATPases associated with a variety of cellular activities CMV05_16425 SM00530 Helix-turn-helix XRE-family like proteins CMV05_16440 SM00020 Trypsin-like serine protease CMV05_16480 SM00387 Histidine kinase-like ATPases CMV05_16480 SM00388 His Kinase A (phosphoacceptor) domain CMV05_16485 SM00448 cheY-homologous receiver domain CMV05_16485 SM00862 Transcriptional regulatory protein, C terminal CMV05_16515 SM00354 helix_turn _helix lactose operon repressor CMV05_16535 SM00382 ATPases associated with a variety of cellular activities CMV05_16580 SM00387 Histidine kinase-like ATPases CMV05_16580 SM00448 cheY-homologous receiver domain CMV05_16610 SM00382 ATPases associated with a variety of cellular activities CMV05_16690 SM00642 Alpha-amylase domain CMV05_16695 SM00671 Sel1-like repeats. CMV05_16780 SM01266 CMV05_16780 CMV05_16845 SM00342 helix_turn_helix, arabinose operon control protein CMV05_16850 SM00448 cheY-homologous receiver domain CMV05_16860 SM00387 Histidine kinase-like ATPases CMV05_16885 SM00116 Domain in cystathionine beta-synthase and other proteins. CMV05_16910 SM00267 diguanylate cyclase CMV05_16940 SM00052 Putative diguanylate phosphodiesterase CMV05_16940 SM00267 diguanylate cyclase CMV05_17000 SM00342 helix_turn_helix, arabinose operon control protein CMV05_17015 SM00062 Bacterial periplasmic substrate-binding proteins CMV05_17015 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CMV05_17025 SM00382 ATPases associated with a variety of cellular activities CMV05_17045 SM00062 Bacterial periplasmic substrate-binding proteins CMV05_17060 SM00267 diguanylate cyclase CMV05_17080 SM00267 diguanylate cyclase CMV05_17080 SM01079 CMV05_17080 CMV05_17085 SM00530 Helix-turn-helix XRE-family like proteins CMV05_17095 SM00267 diguanylate cyclase CMV05_17105 SM00260 Two component signalling adaptor domain CMV05_17105 SM00448 cheY-homologous receiver domain CMV05_17140 SM00073 Histidine Phosphotransfer domain CMV05_17140 SM00091 PAS domain CMV05_17140 SM00387 Histidine kinase-like ATPases CMV05_17140 SM00388 His Kinase A (phosphoacceptor) domain CMV05_17140 SM00448 cheY-homologous receiver domain CMV05_17145 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CMV05_17145 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CMV05_17185 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CMV05_17190 SM00387 Histidine kinase-like ATPases CMV05_17190 SM00388 His Kinase A (phosphoacceptor) domain CMV05_17190 SM00448 cheY-homologous receiver domain CMV05_17220 SM00354 helix_turn _helix lactose operon repressor CMV05_17245 SM00857 Resolvase, N terminal domain CMV05_17250 SM00267 diguanylate cyclase CMV05_17255 SM00028 Tetratricopeptide repeats CMV05_17275 SM00422 helix_turn_helix, mercury resistance CMV05_17285 SM00257 Lysin motif CMV05_17295 SM00487 DEAD-like helicases superfamily CMV05_17295 SM00490 helicase superfamily c-terminal domain CMV05_17375 SM00642 Alpha-amylase domain CMV05_17390 SM00382 ATPases associated with a variety of cellular activities CMV05_17415 SM00448 cheY-homologous receiver domain CMV05_17415 SM00850 LytTr DNA-binding domain CMV05_17440 SM00421 helix_turn_helix, Lux Regulon CMV05_17445 SM00382 ATPases associated with a variety of cellular activities CMV05_17495 SM00420 helix_turn_helix, Deoxyribose operon repressor CMV05_17495 SM01134 CMV05_17495 CMV05_17500 SM00091 PAS domain CMV05_17500 SM00267 diguanylate cyclase CMV05_17510 SM00342 helix_turn_helix, arabinose operon control protein CMV05_17525 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CMV05_17565 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CMV05_17565 SM00382 ATPases associated with a variety of cellular activities CMV05_17575 SM01322 CMV05_17575 CMV05_17580 SM00357 Cold shock protein domain CMV05_17595 SM00448 cheY-homologous receiver domain CMV05_17610 SM01240 CMV05_17610 CMV05_17650 SM00487 DEAD-like helicases superfamily CMV05_17660 SM00530 Helix-turn-helix XRE-family like proteins CMV05_17770 SM00420 helix_turn_helix, Deoxyribose operon repressor CMV05_17770 SM01134 CMV05_17770 CMV05_17800 SM00632 CMV05_17800 CMV05_17800 SM00642 Alpha-amylase domain CMV05_17800 SM01065 Starch binding domain CMV05_17805 SM00382 ATPases associated with a variety of cellular activities CMV05_17840 SM00642 Alpha-amylase domain CMV05_17885 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CMV05_17900 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CMV05_17900 SM00387 Histidine kinase-like ATPases CMV05_17905 SM00421 helix_turn_helix, Lux Regulon CMV05_17905 SM00448 cheY-homologous receiver domain CMV05_17950 SM00316 Ribosomal protein S1-like RNA-binding domain CMV05_17950 SM00357 Cold shock protein domain CMV05_17950 SM00955 CMV05_17950 CMV05_17955 SM00487 DEAD-like helicases superfamily CMV05_17955 SM00490 helicase superfamily c-terminal domain CMV05_17960 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CMV05_18075 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CMV05_18135 SM01266 CMV05_18135 CMV05_18155 SM00901 CMV05_18155 CMV05_18250 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CMV05_18250 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CMV05_18260 SM00357 Cold shock protein domain CMV05_18265 SM00267 diguanylate cyclase CMV05_18280 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CMV05_18280 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CMV05_18290 SM00387 Histidine kinase-like ATPases CMV05_18290 SM00388 His Kinase A (phosphoacceptor) domain CMV05_18295 SM00448 cheY-homologous receiver domain CMV05_18295 SM00862 Transcriptional regulatory protein, C terminal CMV05_18330 SM00881 CoA binding domain CMV05_18940 SM00871 Bacterial transcription activator, effector binding domain CMV05_19445 SM00360 RNA recognition motif CMV05_19640 SM00382 ATPases associated with a variety of cellular activities CMV05_19665 SM00782 PhnA Zinc-Ribbon CMV05_19760 SM00382 ATPases associated with a variety of cellular activities CMV05_19775 SM00327 von Willebrand factor (vWF) type A domain CMV05_19780 SM00382 ATPases associated with a variety of cellular activities CMV05_19800 SM00487 DEAD-like helicases superfamily CMV05_19800 SM00490 helicase superfamily c-terminal domain CMV05_19810 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CMV05_19825 SM00796 Allophanate hydrolase subunit 1 CMV05_19830 SM00797 Allophanate hydrolase subunit 2 CMV05_19845 SM00382 ATPases associated with a variety of cellular activities CMV05_19860 SM00052 Putative diguanylate phosphodiesterase CMV05_19860 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CMV05_19860 SM00267 diguanylate cyclase CMV05_19870 SM00271 DnaJ molecular chaperone homology domain CMV05_19895 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CMV05_19915 SM00052 Putative diguanylate phosphodiesterase CMV05_19915 SM00267 diguanylate cyclase CMV05_19920 SM01057 Eukaryotic-type carbonic anhydrase CMV05_19945 SM00028 Tetratricopeptide repeats CMV05_19950 SM00116 Domain in cystathionine beta-synthase and other proteins. CMV05_19950 SM00382 ATPases associated with a variety of cellular activities CMV05_19980 SM00345 helix_turn_helix gluconate operon transcriptional repressor CMV05_19980 SM00866 CMV05_19980 CMV05_20030 SM00852 Probable molybdopterin binding domain CMV05_20040 SM00450 Rhodanese Homology Domain CMV05_20045 SM00636 CMV05_20045 CMV05_20060 SM00861 Transketolase, pyrimidine binding domain CMV05_20090 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CMV05_20095 SM00867 YceI-like domain CMV05_20125 SM00382 ATPases associated with a variety of cellular activities CMV05_20220 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CMV05_20245 SM00448 cheY-homologous receiver domain CMV05_20250 SM00052 Putative diguanylate phosphodiesterase CMV05_20250 SM00267 diguanylate cyclase CMV05_20250 SM00448 cheY-homologous receiver domain CMV05_20255 SM00387 Histidine kinase-like ATPases CMV05_20260 SM00387 Histidine kinase-like ATPases CMV05_20270 SM00448 cheY-homologous receiver domain CMV05_20275 SM00448 cheY-homologous receiver domain CMV05_20285 SM00267 diguanylate cyclase CMV05_20285 SM00448 cheY-homologous receiver domain CMV05_20295 SM00382 ATPases associated with a variety of cellular activities CMV05_20345 SM00495 Chitin-binding domain type 3 CMV05_20345 SM00636 CMV05_20345 CMV05_20350 SM00342 helix_turn_helix, arabinose operon control protein CMV05_20360 SM00448 cheY-homologous receiver domain CMV05_20365 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CMV05_20365 SM00387 Histidine kinase-like ATPases CMV05_20365 SM00388 His Kinase A (phosphoacceptor) domain CMV05_20390 SM00073 Histidine Phosphotransfer domain CMV05_20390 SM00387 Histidine kinase-like ATPases CMV05_20390 SM00388 His Kinase A (phosphoacceptor) domain CMV05_20390 SM00448 cheY-homologous receiver domain CMV05_20400 SM00851 MGS-like domain CMV05_20445 SM00387 Histidine kinase-like ATPases CMV05_20445 SM00388 His Kinase A (phosphoacceptor) domain CMV05_20445 SM00448 cheY-homologous receiver domain CMV05_20515 SM00382 ATPases associated with a variety of cellular activities CMV05_20550 SM00345 helix_turn_helix gluconate operon transcriptional repressor CMV05_20565 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. CMV05_20590 SM00495 Chitin-binding domain type 3 CMV05_20620 SM00822 CMV05_20620 CMV05_20665 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins CMV05_20680 SM00458 Ricin-type beta-trefoil CMV05_20690 SM00344 helix_turn_helix ASNC type CMV05_20790 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CMV05_20790 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CMV05_20795 SM00642 Alpha-amylase domain CMV05_20840 SM00327 von Willebrand factor (vWF) type A domain CMV05_20845 SM00028 Tetratricopeptide repeats CMV05_20860 SM00267 diguanylate cyclase CMV05_20965 SM00829 Enoylreductase CMV05_20995 SM00421 helix_turn_helix, Lux Regulon CMV05_20995 SM00448 cheY-homologous receiver domain CMV05_21000 SM00387 Histidine kinase-like ATPases CMV05_21015 SM00481 DNA polymerase alpha chain like domain CMV05_21050 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CMV05_21055 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CMV05_21070 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CMV05_21090 SM00387 Histidine kinase-like ATPases CMV05_21090 SM00388 His Kinase A (phosphoacceptor) domain CMV05_21090 SM00448 cheY-homologous receiver domain CMV05_21105 SM00342 helix_turn_helix, arabinose operon control protein CMV05_21110 SM00342 helix_turn_helix, arabinose operon control protein CMV05_21125 SM00823 Phosphopantetheine attachment site CMV05_21130 SM00822 CMV05_21130 CMV05_21130 SM00823 Phosphopantetheine attachment site CMV05_21130 SM00825 Beta-ketoacyl synthase CMV05_21130 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CMV05_21155 SM00382 ATPases associated with a variety of cellular activities CMV05_21160 SM00382 ATPases associated with a variety of cellular activities CMV05_21220 SM00487 DEAD-like helicases superfamily CMV05_21220 SM00490 helicase superfamily c-terminal domain CMV05_21245 SM00487 DEAD-like helicases superfamily CMV05_21250 SM00382 ATPases associated with a variety of cellular activities CMV05_21305 SM00642 Alpha-amylase domain CMV05_21315 SM00420 helix_turn_helix, Deoxyribose operon repressor CMV05_21315 SM01134 CMV05_21315 CMV05_21330 SM01007 Class II Aldolase and Adducin N-terminal domain CMV05_21340 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CMV05_21360 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CMV05_21360 SM00267 diguanylate cyclase CMV05_21370 SM00382 ATPases associated with a variety of cellular activities CMV05_21380 SM00014 Acid phosphatase homologues CMV05_21410 SM00382 ATPases associated with a variety of cellular activities CMV05_21430 SM00354 helix_turn _helix lactose operon repressor CMV05_21440 SM00849 Metallo-beta-lactamase superfamily CMV05_21450 SM01350 CMV05_21450 CMV05_21495 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CMV05_21495 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CMV05_21530 SM00642 Alpha-amylase domain CMV05_21545 SM00421 helix_turn_helix, Lux Regulon CMV05_21555 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CMV05_21555 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CMV05_21555 SM01049 CMV05_21555 CMV05_21610 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CMV05_21635 SM00344 helix_turn_helix ASNC type CMV05_21640 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CMV05_21640 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CMV05_21665 SM00342 helix_turn_helix, arabinose operon control protein CMV05_21680 SM00421 helix_turn_helix, Lux Regulon CMV05_21700 SM00052 Putative diguanylate phosphodiesterase CMV05_21700 SM00267 diguanylate cyclase CMV05_21705 SM00382 ATPases associated with a variety of cellular activities CMV05_21715 SM00331 Sigma factor PP2C-like phosphatases CMV05_21715 SM00448 cheY-homologous receiver domain CMV05_21725 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CMV05_21730 SM00448 cheY-homologous receiver domain CMV05_21740 SM00138 Methyltransferase, chemotaxis proteins CMV05_21745 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CMV05_21745 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CMV05_21750 SM00260 Two component signalling adaptor domain CMV05_21755 SM00260 Two component signalling adaptor domain CMV05_21760 SM00073 Histidine Phosphotransfer domain CMV05_21760 SM00260 Two component signalling adaptor domain CMV05_21760 SM00387 Histidine kinase-like ATPases CMV05_21760 SM01231 CMV05_21760 CMV05_21765 SM00448 cheY-homologous receiver domain CMV05_21785 SM00470 ParB-like nuclease domain CMV05_21945 SM00400 zinc finger CMV05_22325 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CMV05_22325 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CMV05_22325 SM00493 CMV05_22325 CMV05_22380 SM00487 DEAD-like helicases superfamily CMV05_22380 SM00490 helicase superfamily c-terminal domain CMV05_22900 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CMV05_23055 SM00493 CMV05_23055 CMV05_23065 SM01321 CMV05_23065 CMV05_23080 SM00052 Putative diguanylate phosphodiesterase CMV05_23140 SM00487 DEAD-like helicases superfamily CMV05_23140 SM00490 helicase superfamily c-terminal domain CMV05_23390 SM00953 CMV05_23390