VEA_003615 40abbdb55592315c36006a59db870df5 264 Pfam PF00106 short chain dehydrogenase 7 193 7.5E-42 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_003615 40abbdb55592315c36006a59db870df5 264 SUPERFAMILY SSF51735 4 260 1.39E-54 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_003615 40abbdb55592315c36006a59db870df5 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 2.3E-18 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_003615 40abbdb55592315c36006a59db870df5 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 2.3E-18 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_003615 40abbdb55592315c36006a59db870df5 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.3E-18 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_003615 40abbdb55592315c36006a59db870df5 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 2.3E-18 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_003615 40abbdb55592315c36006a59db870df5 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.3E-18 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_003615 40abbdb55592315c36006a59db870df5 264 Gene3D G3DSA:3.40.50.720 2 261 2.8E-56 T 13-10-2018 VEA_003615 40abbdb55592315c36006a59db870df5 264 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 183 9.8E-5 T 13-10-2018 VEA_003615 40abbdb55592315c36006a59db870df5 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 5.4E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_003615 40abbdb55592315c36006a59db870df5 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 5.4E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_003615 40abbdb55592315c36006a59db870df5 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 5.4E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_002871 10fc48a5adbe498d62453b27f2ad3948 377 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 198 214 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VEA_002871 10fc48a5adbe498d62453b27f2ad3948 377 SUPERFAMILY SSF52283 4 130 4.25E-23 T 13-10-2018 VEA_002871 10fc48a5adbe498d62453b27f2ad3948 377 Gene3D G3DSA:3.40.50.720 1 279 3.8E-111 T 13-10-2018 VEA_002871 10fc48a5adbe498d62453b27f2ad3948 377 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 358 44.946 T 13-10-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 VEA_002871 10fc48a5adbe498d62453b27f2ad3948 377 Gene3D G3DSA:3.30.1370.170 294 377 1.7E-31 T 13-10-2018 IPR038251 PdxB, dimerisation domain superfamily KEGG: 00750+1.1.1.290 VEA_002871 10fc48a5adbe498d62453b27f2ad3948 377 Gene3D G3DSA:3.40.50.720 93 258 3.8E-111 T 13-10-2018 VEA_002871 10fc48a5adbe498d62453b27f2ad3948 377 SUPERFAMILY SSF51735 93 258 3.44E-34 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_002871 10fc48a5adbe498d62453b27f2ad3948 377 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 7 285 9.2E-24 T 13-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VEA_002871 10fc48a5adbe498d62453b27f2ad3948 377 Pfam PF11890 Domain of unknown function (DUF3410) 290 370 6.0E-28 T 13-10-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00750+1.1.1.290 VEA_002871 10fc48a5adbe498d62453b27f2ad3948 377 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 257 2.5E-33 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VEA_002311 16b5a99eb0e5a4fbe9bd38fa1c5cc8d7 378 Pfam PF01546 Peptidase family M20/M25/M40 72 373 6.5E-31 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 VEA_002311 16b5a99eb0e5a4fbe9bd38fa1c5cc8d7 378 SUPERFAMILY SSF55031 177 290 1.48E-22 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VEA_002311 16b5a99eb0e5a4fbe9bd38fa1c5cc8d7 378 Hamap MF_01108 Acetylornithine deacetylase [argE]. 1 378 65.495 T 13-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 VEA_002311 16b5a99eb0e5a4fbe9bd38fa1c5cc8d7 378 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 106 143 - T 13-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VEA_002311 16b5a99eb0e5a4fbe9bd38fa1c5cc8d7 378 SUPERFAMILY SSF53187 3 377 4.29E-56 T 13-10-2018 VEA_002311 16b5a99eb0e5a4fbe9bd38fa1c5cc8d7 378 Gene3D G3DSA:3.30.70.360 177 292 4.9E-79 T 13-10-2018 VEA_002311 16b5a99eb0e5a4fbe9bd38fa1c5cc8d7 378 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 71 80 - T 13-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VEA_002311 16b5a99eb0e5a4fbe9bd38fa1c5cc8d7 378 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 8 372 3.6E-127 T 13-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 VEA_002311 16b5a99eb0e5a4fbe9bd38fa1c5cc8d7 378 Gene3D G3DSA:3.40.630.10 28 360 4.9E-79 T 13-10-2018 VEA_002311 16b5a99eb0e5a4fbe9bd38fa1c5cc8d7 378 Pfam PF07687 Peptidase dimerisation domain 174 285 5.9E-26 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain VEA_002368 519a7ef52ef19fb6c5c44cc4e4a68f00 530 PRINTS PR00811 Bacterial general secretion pathway protein D signature 255 265 6.0E-18 T 13-10-2018 IPR001775 GspD/PilQ family VEA_002368 519a7ef52ef19fb6c5c44cc4e4a68f00 530 PRINTS PR00811 Bacterial general secretion pathway protein D signature 324 348 6.0E-18 T 13-10-2018 IPR001775 GspD/PilQ family VEA_002368 519a7ef52ef19fb6c5c44cc4e4a68f00 530 PRINTS PR00811 Bacterial general secretion pathway protein D signature 494 508 6.0E-18 T 13-10-2018 IPR001775 GspD/PilQ family VEA_002368 519a7ef52ef19fb6c5c44cc4e4a68f00 530 PRINTS PR00811 Bacterial general secretion pathway protein D signature 471 489 6.0E-18 T 13-10-2018 IPR001775 GspD/PilQ family VEA_002368 519a7ef52ef19fb6c5c44cc4e4a68f00 530 Pfam PF07655 Secretin N-terminal domain 128 226 8.3E-25 T 13-10-2018 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 VEA_002368 519a7ef52ef19fb6c5c44cc4e4a68f00 530 SMART SM00965 76 124 7.5E-7 T 13-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 VEA_002368 519a7ef52ef19fb6c5c44cc4e4a68f00 530 Pfam PF00263 Bacterial type II and III secretion system protein 329 506 3.0E-40 T 13-10-2018 IPR004846 Type II/III secretion system GO:0009306 VEA_002368 519a7ef52ef19fb6c5c44cc4e4a68f00 530 Gene3D G3DSA:3.55.50.30 31 129 7.7E-12 T 13-10-2018 VEA_002368 519a7ef52ef19fb6c5c44cc4e4a68f00 530 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 221 506 2.9E-90 T 13-10-2018 IPR013358 Pilus biogenesis, MshL VEA_002503 ab74456b5964e4e4d5b7a771b50fb772 439 SUPERFAMILY SSF50249 18 74 3.43E-13 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_002503 ab74456b5964e4e4d5b7a771b50fb772 439 Pfam PF01938 TRAM domain 17 68 6.1E-8 T 13-10-2018 IPR002792 TRAM domain VEA_002503 ab74456b5964e4e4d5b7a771b50fb772 439 Gene3D G3DSA:3.40.50.150 89 433 2.1E-115 T 13-10-2018 VEA_002503 ab74456b5964e4e4d5b7a771b50fb772 439 Gene3D G3DSA:2.40.50.140 1 88 1.2E-28 T 13-10-2018 VEA_002503 ab74456b5964e4e4d5b7a771b50fb772 439 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 421 431 - T 13-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site VEA_002503 ab74456b5964e4e4d5b7a771b50fb772 439 SUPERFAMILY SSF53335 77 438 1.3E-86 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_002503 ab74456b5964e4e4d5b7a771b50fb772 439 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 370 400 - T 13-10-2018 IPR030390 RNA methyltransferase TrmA, active site VEA_002503 ab74456b5964e4e4d5b7a771b50fb772 439 Gene3D G3DSA:3.40.1350.30 135 271 2.1E-115 T 13-10-2018 VEA_002503 ab74456b5964e4e4d5b7a771b50fb772 439 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 19 439 63.929 T 13-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 VEA_002503 ab74456b5964e4e4d5b7a771b50fb772 439 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 25 431 1.8E-130 T 13-10-2018 VEA_002503 ab74456b5964e4e4d5b7a771b50fb772 439 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 97 438 1.4E-33 T 13-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 VEA_000301 dfa9fbd3d11e1dc6785533b3ffa94745 300 Hamap MF_01377 Probable lipid kinase YegS [yegS]. 4 299 43.894 T 13-10-2018 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 VEA_000301 dfa9fbd3d11e1dc6785533b3ffa94745 300 Pfam PF00781 Diacylglycerol kinase catalytic domain 9 126 1.6E-27 T 13-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 VEA_000301 dfa9fbd3d11e1dc6785533b3ffa94745 300 Gene3D G3DSA:3.40.50.10330 23 286 4.2E-78 T 13-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 VEA_000301 dfa9fbd3d11e1dc6785533b3ffa94745 300 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 5 293 3.2E-64 T 13-10-2018 IPR005218 Diacylglycerol/lipid kinase VEA_000301 dfa9fbd3d11e1dc6785533b3ffa94745 300 SUPERFAMILY SSF111331 3 296 4.58E-73 T 13-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily VEA_000301 dfa9fbd3d11e1dc6785533b3ffa94745 300 SMART SM00046 4 131 5.5E-14 T 13-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 VEA_000301 dfa9fbd3d11e1dc6785533b3ffa94745 300 Gene3D G3DSA:2.60.200.40 124 284 4.2E-78 T 13-10-2018 VEA_002067 4f98cb7e38444cb2158c77fc27281883 277 SUPERFAMILY SSF53223 6 105 1.38E-30 T 13-10-2018 VEA_002067 4f98cb7e38444cb2158c77fc27281883 277 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 5 273 32.404 T 13-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 VEA_002067 4f98cb7e38444cb2158c77fc27281883 277 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 10 92 2.1E-21 T 13-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 VEA_002067 4f98cb7e38444cb2158c77fc27281883 277 SUPERFAMILY SSF51735 106 273 4.62E-43 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_002067 4f98cb7e38444cb2158c77fc27281883 277 Gene3D G3DSA:3.40.50.720 119 239 1.8E-84 T 13-10-2018 VEA_002067 4f98cb7e38444cb2158c77fc27281883 277 Gene3D G3DSA:3.40.50.10860 8 258 1.8E-84 T 13-10-2018 VEA_002067 4f98cb7e38444cb2158c77fc27281883 277 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 121 195 6.7E-16 T 13-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase VEA_002067 4f98cb7e38444cb2158c77fc27281883 277 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 8 274 9.4E-87 T 13-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 VEA_001647 9fab825fcc0d3d7aac193c248aecd426 626 Gene3D G3DSA:3.30.450.20 73 206 2.3E-41 T 13-10-2018 VEA_001647 9fab825fcc0d3d7aac193c248aecd426 626 Gene3D G3DSA:1.20.5.170 26 72 7.9E-24 T 13-10-2018 VEA_001647 9fab825fcc0d3d7aac193c248aecd426 626 SUPERFAMILY SSF103190 207 298 2.2E-24 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VEA_001647 9fab825fcc0d3d7aac193c248aecd426 626 SUPERFAMILY SSF55785 352 462 1.19E-18 T 13-10-2018 IPR035965 PAS domain superfamily VEA_001647 9fab825fcc0d3d7aac193c248aecd426 626 Gene3D G3DSA:3.30.70.270 468 624 8.4E-43 T 13-10-2018 VEA_001647 9fab825fcc0d3d7aac193c248aecd426 626 Gene3D G3DSA:3.30.450.20 333 467 8.0E-21 T 13-10-2018 VEA_001647 9fab825fcc0d3d7aac193c248aecd426 626 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 462 617 2.2E-38 T 13-10-2018 IPR000160 GGDEF domain VEA_001647 9fab825fcc0d3d7aac193c248aecd426 626 SUPERFAMILY SSF55073 470 618 3.61E-39 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_001647 9fab825fcc0d3d7aac193c248aecd426 626 Pfam PF00990 Diguanylate cyclase, GGDEF domain 467 614 7.5E-35 T 13-10-2018 IPR000160 GGDEF domain VEA_001647 9fab825fcc0d3d7aac193c248aecd426 626 Pfam PF02743 Cache domain 38 283 4.3E-15 T 13-10-2018 IPR033479 Double Cache domain 1 VEA_001647 9fab825fcc0d3d7aac193c248aecd426 626 Gene3D G3DSA:3.30.450.20 207 302 2.1E-33 T 13-10-2018 VEA_001647 9fab825fcc0d3d7aac193c248aecd426 626 SUPERFAMILY SSF103190 36 206 2.35E-50 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VEA_001647 9fab825fcc0d3d7aac193c248aecd426 626 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 344 461 2.7E-12 T 13-10-2018 IPR000014 PAS domain VEA_001647 9fab825fcc0d3d7aac193c248aecd426 626 SMART SM00267 454 619 2.3E-47 T 13-10-2018 IPR000160 GGDEF domain VEA_001647 9fab825fcc0d3d7aac193c248aecd426 626 Pfam PF13426 PAS domain 352 453 1.1E-9 T 13-10-2018 IPR000014 PAS domain VEA_000133 5676989849a5f71cdf911529557402d3 129 Gene3D G3DSA:3.40.50.620 2 129 2.4E-30 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_000133 5676989849a5f71cdf911529557402d3 129 PIRSF PIRSF006276 1 129 2.3E-37 T 13-10-2018 IPR006015 Universal stress protein A VEA_000133 5676989849a5f71cdf911529557402d3 129 SUPERFAMILY SSF52402 3 125 1.17E-22 T 13-10-2018 VEA_000133 5676989849a5f71cdf911529557402d3 129 Pfam PF00582 Universal stress protein family 3 125 2.4E-14 T 13-10-2018 IPR006016 UspA VEA_004188 a4f598feb5fc218381b14b7f590a217f 909 ProSitePatterns PS01047 Heavy-metal-associated domain. 175 204 - T 13-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 VEA_004188 a4f598feb5fc218381b14b7f590a217f 909 SUPERFAMILY SSF55008 65 125 9.82E-7 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 VEA_004188 a4f598feb5fc218381b14b7f590a217f 909 Pfam PF00403 Heavy-metal-associated domain 6 61 1.3E-6 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VEA_004188 a4f598feb5fc218381b14b7f590a217f 909 Pfam PF00403 Heavy-metal-associated domain 175 234 4.8E-13 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VEA_004188 a4f598feb5fc218381b14b7f590a217f 909 Gene3D G3DSA:3.30.70.100 5 62 6.5E-7 T 13-10-2018 VEA_004188 a4f598feb5fc218381b14b7f590a217f 909 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 598 604 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 VEA_004188 a4f598feb5fc218381b14b7f590a217f 909 Gene3D G3DSA:3.40.50.1000 577 846 6.2E-95 T 13-10-2018 IPR023214 HAD superfamily VEA_004188 a4f598feb5fc218381b14b7f590a217f 909 PRINTS PR00943 Copper-transporting ATPase signature 312 331 1.2E-11 T 13-10-2018 VEA_004188 a4f598feb5fc218381b14b7f590a217f 909 PRINTS PR00943 Copper-transporting ATPase signature 579 594 1.2E-11 T 13-10-2018 VEA_004188 a4f598feb5fc218381b14b7f590a217f 909 PRINTS PR00943 Copper-transporting ATPase signature 384 402 1.2E-11 T 13-10-2018 VEA_004188 a4f598feb5fc218381b14b7f590a217f 909 PRINTS PR00943 Copper-transporting ATPase signature 771 788 1.2E-11 T 13-10-2018 VEA_004188 a4f598feb5fc218381b14b7f590a217f 909 PRINTS PR00943 Copper-transporting ATPase signature 185 199 1.2E-11 T 13-10-2018 VEA_004188 a4f598feb5fc218381b14b7f590a217f 909 PRINTS PR00943 Copper-transporting ATPase signature 517 531 1.2E-11 T 13-10-2018 VEA_004188 a4f598feb5fc218381b14b7f590a217f 909 PRINTS PR00943 Copper-transporting ATPase signature 867 881 1.2E-11 T 13-10-2018 VEA_004188 a4f598feb5fc218381b14b7f590a217f 909 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 327 903 3.2E-183 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VEA_004188 a4f598feb5fc218381b14b7f590a217f 909 Gene3D G3DSA:2.70.150.20 382 498 6.3E-37 T 13-10-2018 VEA_004188 a4f598feb5fc218381b14b7f590a217f 909 Gene3D G3DSA:3.30.70.100 63 126 5.0E-5 T 13-10-2018 VEA_004188 a4f598feb5fc218381b14b7f590a217f 909 Pfam PF00122 E1-E2 ATPase 395 575 6.9E-49 T 13-10-2018 VEA_004188 a4f598feb5fc218381b14b7f590a217f 909 Gene3D G3DSA:3.40.1110.10 607 726 6.2E-95 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 VEA_004188 a4f598feb5fc218381b14b7f590a217f 909 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 308 904 9.5E-183 T 13-10-2018 VEA_004188 a4f598feb5fc218381b14b7f590a217f 909 SUPERFAMILY SSF55008 166 239 5.5E-16 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 VEA_004188 a4f598feb5fc218381b14b7f590a217f 909 SUPERFAMILY SSF81653 397 494 2.35E-25 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 VEA_004188 a4f598feb5fc218381b14b7f590a217f 909 Gene3D G3DSA:3.30.70.100 171 239 7.8E-18 T 13-10-2018 VEA_004188 a4f598feb5fc218381b14b7f590a217f 909 Pfam PF00702 haloacid dehalogenase-like hydrolase 592 808 7.1E-48 T 13-10-2018 VEA_004188 a4f598feb5fc218381b14b7f590a217f 909 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 366 872 5.5E-92 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 VEA_004188 a4f598feb5fc218381b14b7f590a217f 909 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 719 730 1.0E-27 T 13-10-2018 VEA_004188 a4f598feb5fc218381b14b7f590a217f 909 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 817 829 1.0E-27 T 13-10-2018 VEA_004188 a4f598feb5fc218381b14b7f590a217f 909 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 741 751 1.0E-27 T 13-10-2018 VEA_004188 a4f598feb5fc218381b14b7f590a217f 909 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 794 813 1.0E-27 T 13-10-2018 VEA_004188 a4f598feb5fc218381b14b7f590a217f 909 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 444 458 1.0E-27 T 13-10-2018 VEA_004188 a4f598feb5fc218381b14b7f590a217f 909 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 596 610 1.0E-27 T 13-10-2018 VEA_004188 a4f598feb5fc218381b14b7f590a217f 909 SUPERFAMILY SSF81665 360 860 6.28E-10 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 VEA_004188 a4f598feb5fc218381b14b7f590a217f 909 SUPERFAMILY SSF56784 594 900 1.37E-60 T 13-10-2018 IPR036412 HAD-like superfamily VEA_004188 a4f598feb5fc218381b14b7f590a217f 909 SUPERFAMILY SSF55008 1 62 2.75E-7 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 VEA_001131 1efc58c219e745809d028c965f4340c6 385 Gene3D G3DSA:2.60.410.10 275 365 7.8E-27 T 13-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VEA_001131 1efc58c219e745809d028c965f4340c6 385 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 275 365 6.2E-22 T 13-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VEA_001131 1efc58c219e745809d028c965f4340c6 385 SMART SM00936 275 365 5.3E-28 T 13-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VEA_001131 1efc58c219e745809d028c965f4340c6 385 SUPERFAMILY SSF56601 1 275 1.23E-83 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VEA_001131 1efc58c219e745809d028c965f4340c6 385 Gene3D G3DSA:3.40.710.10 18 273 3.0E-89 T 13-10-2018 VEA_001131 1efc58c219e745809d028c965f4340c6 385 SUPERFAMILY SSF69189 275 367 4.51E-23 T 13-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VEA_001131 1efc58c219e745809d028c965f4340c6 385 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 24 254 1.2E-85 T 13-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 VEA_001131 1efc58c219e745809d028c965f4340c6 385 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 58 69 7.3E-19 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VEA_001131 1efc58c219e745809d028c965f4340c6 385 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 141 154 7.3E-19 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VEA_001131 1efc58c219e745809d028c965f4340c6 385 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 114 131 7.3E-19 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VEA_004022 2451195ffac4b8f88fb4cc8fd0e06529 369 Gene3D G3DSA:2.40.420.20 269 337 1.2E-71 T 13-10-2018 VEA_004022 2451195ffac4b8f88fb4cc8fd0e06529 369 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 44 258 8.6E-30 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VEA_004022 2451195ffac4b8f88fb4cc8fd0e06529 369 SUPERFAMILY SSF111369 48 263 1.26E-38 T 13-10-2018 VEA_004022 2451195ffac4b8f88fb4cc8fd0e06529 369 Gene3D G3DSA:2.40.30.170 46 268 1.2E-71 T 13-10-2018 VEA_004022 2451195ffac4b8f88fb4cc8fd0e06529 369 Gene3D G3DSA:1.10.287.470 93 152 1.2E-71 T 13-10-2018 VEA_004022 2451195ffac4b8f88fb4cc8fd0e06529 369 Gene3D G3DSA:2.40.50.100 58 186 1.2E-71 T 13-10-2018 VEA_004022 2451195ffac4b8f88fb4cc8fd0e06529 369 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 339 2.9E-88 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VEA_002307 8d33ecdf7e12624d5fe34dc68b1c0101 802 SUPERFAMILY SSF53633 5 291 2.75E-58 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VEA_002307 8d33ecdf7e12624d5fe34dc68b1c0101 802 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 8 445 2.5E-66 T 13-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VEA_002307 8d33ecdf7e12624d5fe34dc68b1c0101 802 Gene3D G3DSA:3.40.50.720 451 798 1.8E-102 T 13-10-2018 VEA_002307 8d33ecdf7e12624d5fe34dc68b1c0101 802 SUPERFAMILY SSF51735 448 622 8.41E-35 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_002307 8d33ecdf7e12624d5fe34dc68b1c0101 802 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 457 592 1.4E-14 T 13-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 VEA_002307 8d33ecdf7e12624d5fe34dc68b1c0101 802 Gene3D G3DSA:3.30.2130.10 299 449 6.2E-6 T 13-10-2018 VEA_002307 8d33ecdf7e12624d5fe34dc68b1c0101 802 Pfam PF00696 Amino acid kinase family 5 273 2.0E-44 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VEA_002307 8d33ecdf7e12624d5fe34dc68b1c0101 802 Gene3D G3DSA:1.20.120.1320 44 137 8.2E-74 T 13-10-2018 VEA_002307 8d33ecdf7e12624d5fe34dc68b1c0101 802 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 646 668 - T 13-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 VEA_002307 8d33ecdf7e12624d5fe34dc68b1c0101 802 Pfam PF00742 Homoserine dehydrogenase 600 795 3.0E-42 T 13-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 VEA_002307 8d33ecdf7e12624d5fe34dc68b1c0101 802 SUPERFAMILY SSF55347 600 783 3.66E-44 T 13-10-2018 VEA_002307 8d33ecdf7e12624d5fe34dc68b1c0101 802 PIRSF PIRSF000727 5 802 4.9E-287 T 13-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VEA_002307 8d33ecdf7e12624d5fe34dc68b1c0101 802 Gene3D G3DSA:3.30.360.10 611 781 1.8E-102 T 13-10-2018 VEA_002307 8d33ecdf7e12624d5fe34dc68b1c0101 802 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 13-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VEA_002307 8d33ecdf7e12624d5fe34dc68b1c0101 802 Gene3D G3DSA:3.40.1160.10 8 290 8.2E-74 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VEA_001550 9cea4b436bf69ea3cfceb779fe927104 301 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 166 1.8E-51 T 13-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 VEA_001550 9cea4b436bf69ea3cfceb779fe927104 301 Gene3D G3DSA:3.40.50.720 1 167 2.5E-53 T 13-10-2018 VEA_001550 9cea4b436bf69ea3cfceb779fe927104 301 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 13-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 VEA_001550 9cea4b436bf69ea3cfceb779fe927104 301 PIRSF PIRSF000103 1 301 2.3E-78 T 13-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 VEA_001550 9cea4b436bf69ea3cfceb779fe927104 301 SUPERFAMILY SSF48179 168 297 4.76E-40 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VEA_001550 9cea4b436bf69ea3cfceb779fe927104 301 Gene3D G3DSA:1.10.1040.10 169 301 2.5E-43 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VEA_001550 9cea4b436bf69ea3cfceb779fe927104 301 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 297 1.9E-120 T 13-10-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 VEA_001550 9cea4b436bf69ea3cfceb779fe927104 301 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 169 295 8.1E-30 T 13-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 VEA_001550 9cea4b436bf69ea3cfceb779fe927104 301 SUPERFAMILY SSF51735 3 167 6.81E-44 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_002601 f019e7982d442aec08b0239f7a90b76f 98 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 98 1.0E-44 T 13-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 VEA_002601 f019e7982d442aec08b0239f7a90b76f 98 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 8.0E-21 T 13-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 VEA_002601 f019e7982d442aec08b0239f7a90b76f 98 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 6.3E-37 T 13-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 VEA_002601 f019e7982d442aec08b0239f7a90b76f 98 Gene3D G3DSA:3.30.110.60 1 98 7.2E-37 T 13-10-2018 IPR035920 YhbY-like superfamily VEA_002601 f019e7982d442aec08b0239f7a90b76f 98 SMART SM01103 3 86 1.3E-41 T 13-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 VEA_002601 f019e7982d442aec08b0239f7a90b76f 98 SUPERFAMILY SSF75471 1 94 5.89E-30 T 13-10-2018 IPR035920 YhbY-like superfamily VEA_003634 121c9d902eeb1a9ea06087e67afbf939 241 SUPERFAMILY SSF81901 34 201 1.6E-20 T 13-10-2018 VEA_003634 121c9d902eeb1a9ea06087e67afbf939 241 Pfam PF13431 Tetratricopeptide repeat 95 127 3.5E-6 T 13-10-2018 VEA_003634 121c9d902eeb1a9ea06087e67afbf939 241 Gene3D G3DSA:1.25.40.10 37 239 1.6E-36 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_003634 121c9d902eeb1a9ea06087e67afbf939 241 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 10 239 2.1E-80 T 13-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW VEA_003634 121c9d902eeb1a9ea06087e67afbf939 241 Pfam PF14559 Tetratricopeptide repeat 154 197 1.4E-5 T 13-10-2018 VEA_003634 121c9d902eeb1a9ea06087e67afbf939 241 SMART SM00028 73 106 8.4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_003634 121c9d902eeb1a9ea06087e67afbf939 241 SMART SM00028 107 140 35.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_003634 121c9d902eeb1a9ea06087e67afbf939 241 SMART SM00028 39 72 43.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_003634 121c9d902eeb1a9ea06087e67afbf939 241 SMART SM00028 143 176 4.3 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_000627 b23b87b3df9739fb728bffa04c4e67b9 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.1E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000627 b23b87b3df9739fb728bffa04c4e67b9 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 2.1E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000627 b23b87b3df9739fb728bffa04c4e67b9 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.1E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000627 b23b87b3df9739fb728bffa04c4e67b9 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 2.1E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000627 b23b87b3df9739fb728bffa04c4e67b9 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.1E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000627 b23b87b3df9739fb728bffa04c4e67b9 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.1E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000627 b23b87b3df9739fb728bffa04c4e67b9 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VEA_000627 b23b87b3df9739fb728bffa04c4e67b9 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 244 4.6E-54 T 13-10-2018 VEA_000627 b23b87b3df9739fb728bffa04c4e67b9 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.2E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000627 b23b87b3df9739fb728bffa04c4e67b9 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.2E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000627 b23b87b3df9739fb728bffa04c4e67b9 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.2E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000627 b23b87b3df9739fb728bffa04c4e67b9 253 SUPERFAMILY SSF51735 5 244 1.28E-65 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_000627 b23b87b3df9739fb728bffa04c4e67b9 253 Gene3D G3DSA:3.40.50.720 1 249 1.2E-68 T 13-10-2018 VEA_003031 ce7d1bcc98702489952e8f9b3d59af78 203 PIRSF PIRSF000005 2 203 3.6E-62 T 13-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 VEA_003031 ce7d1bcc98702489952e8f9b3d59af78 203 Pfam PF00034 Cytochrome c 133 201 2.0E-6 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_003031 ce7d1bcc98702489952e8f9b3d59af78 203 Gene3D G3DSA:1.10.760.10 26 96 8.4E-18 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEA_003031 ce7d1bcc98702489952e8f9b3d59af78 203 Gene3D G3DSA:1.10.760.10 118 201 2.3E-23 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEA_003031 ce7d1bcc98702489952e8f9b3d59af78 203 SUPERFAMILY SSF46626 26 96 3.58E-14 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEA_003031 ce7d1bcc98702489952e8f9b3d59af78 203 SUPERFAMILY SSF46626 120 201 2.62E-20 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEA_002793 d69c27ecdd867e8fb64c0bdf92457d11 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 287 7.1E-109 T 13-10-2018 IPR002220 DapA-like GO:0016829 VEA_002793 d69c27ecdd867e8fb64c0bdf92457d11 292 PIRSF PIRSF001365 1 292 8.2E-95 T 13-10-2018 IPR002220 DapA-like GO:0016829 VEA_002793 d69c27ecdd867e8fb64c0bdf92457d11 292 SUPERFAMILY SSF51569 2 290 6.49E-101 T 13-10-2018 VEA_002793 d69c27ecdd867e8fb64c0bdf92457d11 292 Gene3D G3DSA:3.20.20.70 1 292 1.5E-110 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_002793 d69c27ecdd867e8fb64c0bdf92457d11 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 65.568 T 13-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VEA_002793 d69c27ecdd867e8fb64c0bdf92457d11 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 288 2.7E-117 T 13-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VEA_002793 d69c27ecdd867e8fb64c0bdf92457d11 292 SMART SM01130 1 290 6.5E-142 T 13-10-2018 IPR002220 DapA-like GO:0016829 VEA_002793 d69c27ecdd867e8fb64c0bdf92457d11 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 3.7E-35 T 13-10-2018 IPR002220 DapA-like GO:0016829 VEA_002793 d69c27ecdd867e8fb64c0bdf92457d11 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 3.7E-35 T 13-10-2018 IPR002220 DapA-like GO:0016829 VEA_002793 d69c27ecdd867e8fb64c0bdf92457d11 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 3.7E-35 T 13-10-2018 IPR002220 DapA-like GO:0016829 VEA_002793 d69c27ecdd867e8fb64c0bdf92457d11 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 3.7E-35 T 13-10-2018 IPR002220 DapA-like GO:0016829 VEA_002793 d69c27ecdd867e8fb64c0bdf92457d11 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 13-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VEA_002793 d69c27ecdd867e8fb64c0bdf92457d11 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 13-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 VEA_001016 aaf89169cb297ccca66f21fa0ec3f1f0 270 Pfam PF12833 Helix-turn-helix domain 189 267 2.5E-18 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_001016 aaf89169cb297ccca66f21fa0ec3f1f0 270 Gene3D G3DSA:1.10.10.60 217 269 5.9E-15 T 13-10-2018 VEA_001016 aaf89169cb297ccca66f21fa0ec3f1f0 270 Gene3D G3DSA:1.10.10.60 169 216 2.7E-10 T 13-10-2018 VEA_001016 aaf89169cb297ccca66f21fa0ec3f1f0 270 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 235 250 5.8E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEA_001016 aaf89169cb297ccca66f21fa0ec3f1f0 270 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 250 266 5.8E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEA_001016 aaf89169cb297ccca66f21fa0ec3f1f0 270 SMART SM00342 183 266 1.5E-28 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_001016 aaf89169cb297ccca66f21fa0ec3f1f0 270 SUPERFAMILY SSF51215 30 110 6.8E-5 T 13-10-2018 IPR037923 Transcription regulator HTH-like VEA_001016 aaf89169cb297ccca66f21fa0ec3f1f0 270 SUPERFAMILY SSF46689 220 268 1.61E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_001016 aaf89169cb297ccca66f21fa0ec3f1f0 270 SUPERFAMILY SSF46689 170 216 2.24E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_003436 02fffe3e5fdbb152b18e3e428bb0de37 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 13-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 VEA_003436 02fffe3e5fdbb152b18e3e428bb0de37 336 SUPERFAMILY SSF51395 1 336 4.66E-108 T 13-10-2018 VEA_003436 02fffe3e5fdbb152b18e3e428bb0de37 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 1.3E-146 T 13-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 VEA_003436 02fffe3e5fdbb152b18e3e428bb0de37 336 Gene3D G3DSA:3.20.20.70 2 336 2.5E-143 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_003436 02fffe3e5fdbb152b18e3e428bb0de37 336 PIRSF PIRSF000164 10 336 1.9E-105 T 13-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 VEA_003436 02fffe3e5fdbb152b18e3e428bb0de37 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 51.397 T 13-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 VEA_003436 02fffe3e5fdbb152b18e3e428bb0de37 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 336 5.7E-91 T 13-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 VEA_003436 02fffe3e5fdbb152b18e3e428bb0de37 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 13-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 VEA_004030 2392f6e3ea4deb243e0bd50e6651896c 288 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 18 287 56.45 T 13-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 VEA_004030 2392f6e3ea4deb243e0bd50e6651896c 288 SUPERFAMILY SSF52096 20 284 1.71E-78 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEA_004030 2392f6e3ea4deb243e0bd50e6651896c 288 Gene3D G3DSA:1.10.12.10 226 276 5.4E-31 T 13-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal VEA_004030 2392f6e3ea4deb243e0bd50e6651896c 288 TIGRFAM TIGR01929 menB: naphthoate synthase 25 284 7.7E-145 T 13-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 VEA_004030 2392f6e3ea4deb243e0bd50e6651896c 288 Gene3D G3DSA:3.90.226.10 3 225 1.1E-84 T 13-10-2018 VEA_004030 2392f6e3ea4deb243e0bd50e6651896c 288 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 126 146 - T 13-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 VEA_004030 2392f6e3ea4deb243e0bd50e6651896c 288 Pfam PF00378 Enoyl-CoA hydratase/isomerase 34 282 2.5E-78 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 VEA_003869 4b8a38cce2e3bb5eebe6dbbac3c28e5d 268 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 22 266 8.0E-70 T 13-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 VEA_003869 4b8a38cce2e3bb5eebe6dbbac3c28e5d 268 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 14 268 32.741 T 13-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 VEA_003869 4b8a38cce2e3bb5eebe6dbbac3c28e5d 268 Pfam PF08241 Methyltransferase domain 58 151 5.3E-26 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 VEA_003869 4b8a38cce2e3bb5eebe6dbbac3c28e5d 268 SUPERFAMILY SSF53335 20 203 1.37E-44 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_003869 4b8a38cce2e3bb5eebe6dbbac3c28e5d 268 Gene3D G3DSA:3.40.50.150 13 265 8.0E-41 T 13-10-2018 VEA_000028 77d019d5bb977bc45941f9d6f0ea7f1f 159 SUPERFAMILY SSF141452 4 157 9.68E-36 T 13-10-2018 IPR036624 Hcp1-like superfamily VEA_000028 77d019d5bb977bc45941f9d6f0ea7f1f 159 Pfam PF05638 Type VI secretion system effector, Hcp 6 133 5.0E-28 T 13-10-2018 IPR008514 Type VI secretion system effector, Hcp VEA_000028 77d019d5bb977bc45941f9d6f0ea7f1f 159 Gene3D G3DSA:2.30.110.20 2 158 1.1E-33 T 13-10-2018 IPR036624 Hcp1-like superfamily VEA_002256 97303315cdac009ef09419735ff7c06a 571 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 169 389 1.1E-49 T 13-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 VEA_002256 97303315cdac009ef09419735ff7c06a 571 Gene3D G3DSA:3.10.350.10 520 571 8.2E-16 T 13-10-2018 IPR036779 LysM domain superfamily VEA_002256 97303315cdac009ef09419735ff7c06a 571 Gene3D G3DSA:3.10.350.10 401 463 2.7E-15 T 13-10-2018 IPR036779 LysM domain superfamily VEA_002256 97303315cdac009ef09419735ff7c06a 571 SUPERFAMILY SSF53187 167 392 5.34E-53 T 13-10-2018 VEA_002256 97303315cdac009ef09419735ff7c06a 571 Gene3D G3DSA:3.40.630.40 159 398 6.3E-69 T 13-10-2018 VEA_002256 97303315cdac009ef09419735ff7c06a 571 SUPERFAMILY SSF54106 526 569 3.14E-10 T 13-10-2018 VEA_002256 97303315cdac009ef09419735ff7c06a 571 SUPERFAMILY SSF54106 472 516 1.03E-9 T 13-10-2018 VEA_002256 97303315cdac009ef09419735ff7c06a 571 SMART SM00646 230 389 9.7E-63 T 13-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 VEA_002256 97303315cdac009ef09419735ff7c06a 571 Pfam PF01476 LysM domain 411 453 3.9E-15 T 13-10-2018 IPR018392 LysM domain VEA_002256 97303315cdac009ef09419735ff7c06a 571 Pfam PF01476 LysM domain 527 569 7.6E-13 T 13-10-2018 IPR018392 LysM domain VEA_002256 97303315cdac009ef09419735ff7c06a 571 Pfam PF01476 LysM domain 474 516 1.3E-11 T 13-10-2018 IPR018392 LysM domain VEA_002256 97303315cdac009ef09419735ff7c06a 571 SMART SM00257 526 569 1.0E-12 T 13-10-2018 IPR018392 LysM domain VEA_002256 97303315cdac009ef09419735ff7c06a 571 SMART SM00257 410 453 9.9E-16 T 13-10-2018 IPR018392 LysM domain VEA_002256 97303315cdac009ef09419735ff7c06a 571 SMART SM00257 473 516 3.5E-14 T 13-10-2018 IPR018392 LysM domain VEA_002256 97303315cdac009ef09419735ff7c06a 571 SUPERFAMILY SSF54106 409 453 1.57E-10 T 13-10-2018 VEA_002256 97303315cdac009ef09419735ff7c06a 571 Gene3D G3DSA:3.10.350.10 469 519 3.8E-14 T 13-10-2018 IPR036779 LysM domain superfamily VEA_002256 97303315cdac009ef09419735ff7c06a 571 Gene3D G3DSA:2.60.40.3500 23 158 3.1E-24 T 13-10-2018 VEA_002256 97303315cdac009ef09419735ff7c06a 571 Pfam PF11741 AMIN domain 34 135 2.3E-16 T 13-10-2018 IPR021731 AMIN domain VEA_001535 b9b4ef38cea02eaae90b2815dd29b86b 318 Pfam PF01965 DJ-1/PfpI family 27 169 1.0E-12 T 13-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 VEA_001535 b9b4ef38cea02eaae90b2815dd29b86b 318 SMART SM00342 232 315 2.3E-21 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_001535 b9b4ef38cea02eaae90b2815dd29b86b 318 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 284 299 1.7E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEA_001535 b9b4ef38cea02eaae90b2815dd29b86b 318 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 299 315 1.7E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEA_001535 b9b4ef38cea02eaae90b2815dd29b86b 318 SUPERFAMILY SSF46689 268 316 3.85E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_001535 b9b4ef38cea02eaae90b2815dd29b86b 318 SUPERFAMILY SSF52317 7 196 5.29E-41 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VEA_001535 b9b4ef38cea02eaae90b2815dd29b86b 318 Gene3D G3DSA:3.40.50.880 3 204 4.9E-50 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VEA_001535 b9b4ef38cea02eaae90b2815dd29b86b 318 SUPERFAMILY SSF46689 215 266 7.17E-6 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_001535 b9b4ef38cea02eaae90b2815dd29b86b 318 Pfam PF12833 Helix-turn-helix domain 240 316 5.9E-20 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_001535 b9b4ef38cea02eaae90b2815dd29b86b 318 Gene3D G3DSA:1.10.10.60 211 318 5.0E-31 T 13-10-2018 VEA_001535 b9b4ef38cea02eaae90b2815dd29b86b 318 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 269 311 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VEA_003948 0d665cdbb2afbb5bb1a94fab0fdaeb6b 876 Gene3D G3DSA:3.40.50.140 1 170 1.4E-66 T 13-10-2018 VEA_003948 0d665cdbb2afbb5bb1a94fab0fdaeb6b 876 Pfam PF01751 Toprim domain 5 149 5.3E-32 T 13-10-2018 IPR006171 TOPRIM domain VEA_003948 0d665cdbb2afbb5bb1a94fab0fdaeb6b 876 Gene3D G3DSA:1.10.290.10 287 411 1.8E-161 T 13-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 VEA_003948 0d665cdbb2afbb5bb1a94fab0fdaeb6b 876 Gene3D G3DSA:2.20.25.10 813 871 1.0E-27 T 13-10-2018 VEA_003948 0d665cdbb2afbb5bb1a94fab0fdaeb6b 876 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 640 1.6E-248 T 13-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 VEA_003948 0d665cdbb2afbb5bb1a94fab0fdaeb6b 876 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 737 54.244 T 13-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 VEA_003948 0d665cdbb2afbb5bb1a94fab0fdaeb6b 876 SUPERFAMILY SSF57783 814 870 3.23E-21 T 13-10-2018 VEA_003948 0d665cdbb2afbb5bb1a94fab0fdaeb6b 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 198 216 7.2E-36 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VEA_003948 0d665cdbb2afbb5bb1a94fab0fdaeb6b 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 113 126 7.2E-36 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VEA_003948 0d665cdbb2afbb5bb1a94fab0fdaeb6b 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 321 330 7.2E-36 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VEA_003948 0d665cdbb2afbb5bb1a94fab0fdaeb6b 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 397 413 7.2E-36 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VEA_003948 0d665cdbb2afbb5bb1a94fab0fdaeb6b 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 496 510 7.2E-36 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VEA_003948 0d665cdbb2afbb5bb1a94fab0fdaeb6b 876 Pfam PF01131 DNA topoisomerase 164 571 6.2E-128 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VEA_003948 0d665cdbb2afbb5bb1a94fab0fdaeb6b 876 SMART SM00493 3 139 4.3E-33 T 13-10-2018 IPR006171 TOPRIM domain VEA_003948 0d665cdbb2afbb5bb1a94fab0fdaeb6b 876 SMART SM00436 140 228 2.5E-47 T 13-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 VEA_003948 0d665cdbb2afbb5bb1a94fab0fdaeb6b 876 SUPERFAMILY SSF57783 749 812 2.21E-19 T 13-10-2018 VEA_003948 0d665cdbb2afbb5bb1a94fab0fdaeb6b 876 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 603 628 4.8E-5 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VEA_003948 0d665cdbb2afbb5bb1a94fab0fdaeb6b 876 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 713 750 4.5E-9 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VEA_003948 0d665cdbb2afbb5bb1a94fab0fdaeb6b 876 Pfam PF08272 Topoisomerase I zinc-ribbon-like 762 798 2.9E-11 T 13-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 VEA_003948 0d665cdbb2afbb5bb1a94fab0fdaeb6b 876 Pfam PF08272 Topoisomerase I zinc-ribbon-like 829 869 3.1E-17 T 13-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 VEA_003948 0d665cdbb2afbb5bb1a94fab0fdaeb6b 876 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 316 330 - T 13-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 VEA_003948 0d665cdbb2afbb5bb1a94fab0fdaeb6b 876 SUPERFAMILY SSF57783 705 747 2.04E-5 T 13-10-2018 VEA_003948 0d665cdbb2afbb5bb1a94fab0fdaeb6b 876 SUPERFAMILY SSF56712 3 615 8.5E-199 T 13-10-2018 IPR023405 DNA topoisomerase, type IA, core domain VEA_003948 0d665cdbb2afbb5bb1a94fab0fdaeb6b 876 Gene3D G3DSA:1.10.460.10 172 577 1.8E-161 T 13-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VEA_003948 0d665cdbb2afbb5bb1a94fab0fdaeb6b 876 Gene3D G3DSA:2.70.20.10 220 479 1.8E-161 T 13-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VEA_003948 0d665cdbb2afbb5bb1a94fab0fdaeb6b 876 SMART SM00437 279 533 1.4E-117 T 13-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 VEA_003948 0d665cdbb2afbb5bb1a94fab0fdaeb6b 876 Gene3D G3DSA:3.30.65.10 702 749 2.7E-6 T 13-10-2018 VEA_003948 0d665cdbb2afbb5bb1a94fab0fdaeb6b 876 Gene3D G3DSA:3.30.65.10 750 812 7.3E-32 T 13-10-2018 VEA_003890 96b33efe3e6fa71880d6f33d82625727 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 204 214 1.4E-22 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VEA_003890 96b33efe3e6fa71880d6f33d82625727 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 23 39 1.4E-22 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VEA_003890 96b33efe3e6fa71880d6f33d82625727 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 152 173 1.4E-22 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VEA_003890 96b33efe3e6fa71880d6f33d82625727 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 74 93 1.4E-22 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VEA_003890 96b33efe3e6fa71880d6f33d82625727 340 Pfam PF00579 tRNA synthetases class I (W and Y) 11 292 6.6E-53 T 13-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEA_003890 96b33efe3e6fa71880d6f33d82625727 340 Gene3D G3DSA:3.40.50.620 13 332 7.2E-101 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_003890 96b33efe3e6fa71880d6f33d82625727 340 Gene3D G3DSA:1.10.240.10 191 305 7.2E-101 T 13-10-2018 VEA_003890 96b33efe3e6fa71880d6f33d82625727 340 SUPERFAMILY SSF52374 12 337 4.08E-76 T 13-10-2018 VEA_003890 96b33efe3e6fa71880d6f33d82625727 340 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 11 337 3.9E-71 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VEA_002030 66c46df2eff84735917474ea67ced57a 467 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 349 2.3E-60 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEA_002030 66c46df2eff84735917474ea67ced57a 467 Gene3D G3DSA:1.10.1140.10 352 467 1.9E-53 T 13-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEA_002030 66c46df2eff84735917474ea67ced57a 467 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 467 56.093 T 13-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 VEA_002030 66c46df2eff84735917474ea67ced57a 467 Gene3D G3DSA:3.40.50.300 76 351 3.9E-110 T 13-10-2018 VEA_002030 66c46df2eff84735917474ea67ced57a 467 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 340 349 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEA_002030 66c46df2eff84735917474ea67ced57a 467 SUPERFAMILY SSF50615 1 75 1.65E-25 T 13-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEA_002030 66c46df2eff84735917474ea67ced57a 467 SUPERFAMILY SSF52540 77 355 6.77E-85 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002030 66c46df2eff84735917474ea67ced57a 467 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 467 2.9E-249 T 13-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 VEA_002030 66c46df2eff84735917474ea67ced57a 467 SMART SM00382 142 334 2.9E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_002030 66c46df2eff84735917474ea67ced57a 467 SUPERFAMILY SSF47917 352 466 6.28E-51 T 13-10-2018 VEA_002030 66c46df2eff84735917474ea67ced57a 467 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 73 1.2E-20 T 13-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEA_002030 66c46df2eff84735917474ea67ced57a 467 Gene3D G3DSA:2.40.10.170 2 75 4.8E-30 T 13-10-2018 VEA_002415 34dd4613abc20a22200afddeffec211a 421 SUPERFAMILY SSF55205 6 418 8.99E-142 T 13-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 VEA_002415 34dd4613abc20a22200afddeffec211a 421 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 43.72 T 13-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VEA_002415 34dd4613abc20a22200afddeffec211a 421 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 11 407 5.4E-123 T 13-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 VEA_002415 34dd4613abc20a22200afddeffec211a 421 Gene3D G3DSA:3.65.10.10 22 229 3.1E-171 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 VEA_002415 34dd4613abc20a22200afddeffec211a 421 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 2.4E-182 T 13-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VEA_002415 34dd4613abc20a22200afddeffec211a 421 Gene3D G3DSA:3.65.10.10 12 414 3.1E-171 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 VEA_002580 1aa032259ae8b27ace9d55d23e0fb63b 296 Gene3D G3DSA:3.30.420.40 115 261 4.2E-67 T 13-10-2018 VEA_002580 1aa032259ae8b27ace9d55d23e0fb63b 296 SUPERFAMILY SSF53067 114 283 9.23E-43 T 13-10-2018 VEA_002580 1aa032259ae8b27ace9d55d23e0fb63b 296 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 6 283 1.2E-43 T 13-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 VEA_002580 1aa032259ae8b27ace9d55d23e0fb63b 296 SUPERFAMILY SSF53067 1 111 2.96E-24 T 13-10-2018 VEA_002580 1aa032259ae8b27ace9d55d23e0fb63b 296 Gene3D G3DSA:3.30.420.40 4 114 4.2E-67 T 13-10-2018 VEA_001688 a965419f1d4d1b5d8cdb65caece0b0cd 452 SUPERFAMILY SSF53623 97 308 4.19E-53 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VEA_001688 a965419f1d4d1b5d8cdb65caece0b0cd 452 Pfam PF01225 Mur ligase family, catalytic domain 2 101 2.9E-18 T 13-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 VEA_001688 a965419f1d4d1b5d8cdb65caece0b0cd 452 Gene3D G3DSA:3.90.190.20 314 450 1.4E-31 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VEA_001688 a965419f1d4d1b5d8cdb65caece0b0cd 452 Gene3D G3DSA:3.40.1190.10 91 313 1.9E-57 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VEA_001688 a965419f1d4d1b5d8cdb65caece0b0cd 452 SUPERFAMILY SSF53244 311 448 8.24E-38 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VEA_001688 a965419f1d4d1b5d8cdb65caece0b0cd 452 SUPERFAMILY SSF51984 1 89 1.14E-22 T 13-10-2018 VEA_001688 a965419f1d4d1b5d8cdb65caece0b0cd 452 Pfam PF08245 Mur ligase middle domain 108 291 3.4E-21 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VEA_001688 a965419f1d4d1b5d8cdb65caece0b0cd 452 Gene3D G3DSA:3.40.50.720 1 90 9.2E-36 T 13-10-2018 VEA_001688 a965419f1d4d1b5d8cdb65caece0b0cd 452 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 7.3E-260 T 13-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 VEA_001688 a965419f1d4d1b5d8cdb65caece0b0cd 452 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 449 59.299 T 13-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 VEA_001688 a965419f1d4d1b5d8cdb65caece0b0cd 452 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 386 1.2E-10 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VEA_004111 cecb7469b53203e9bc5303131969f93e 402 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 172 400 4.0E-82 T 13-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 VEA_004111 cecb7469b53203e9bc5303131969f93e 402 SUPERFAMILY SSF51230 1 94 4.06E-24 T 13-10-2018 IPR011053 Single hybrid motif VEA_004111 cecb7469b53203e9bc5303131969f93e 402 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 402 3.1E-187 T 13-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 VEA_004111 cecb7469b53203e9bc5303131969f93e 402 Pfam PF02817 e3 binding domain 113 146 2.3E-12 T 13-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 VEA_004111 cecb7469b53203e9bc5303131969f93e 402 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 VEA_004111 cecb7469b53203e9bc5303131969f93e 402 SUPERFAMILY SSF47005 106 150 8.37E-12 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VEA_004111 cecb7469b53203e9bc5303131969f93e 402 Pfam PF00364 Biotin-requiring enzyme 4 76 8.5E-19 T 13-10-2018 IPR000089 Biotin/lipoyl attachment VEA_004111 cecb7469b53203e9bc5303131969f93e 402 Gene3D G3DSA:3.30.559.10 170 402 7.4E-98 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VEA_004111 cecb7469b53203e9bc5303131969f93e 402 Gene3D G3DSA:2.40.50.100 1 79 5.5E-22 T 13-10-2018 VEA_004111 cecb7469b53203e9bc5303131969f93e 402 SUPERFAMILY SSF52777 173 401 3.51E-90 T 13-10-2018 VEA_004111 cecb7469b53203e9bc5303131969f93e 402 Gene3D G3DSA:4.10.320.10 102 152 5.7E-22 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VEA_000932 b56b8e3fd4dbd3f70eed3ed67b1c3e10 365 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 215 362 5.7E-31 T 13-10-2018 IPR000160 GGDEF domain VEA_000932 b56b8e3fd4dbd3f70eed3ed67b1c3e10 365 SMART SM00267 205 365 9.5E-31 T 13-10-2018 IPR000160 GGDEF domain VEA_000932 b56b8e3fd4dbd3f70eed3ed67b1c3e10 365 Pfam PF00990 Diguanylate cyclase, GGDEF domain 218 363 1.7E-32 T 13-10-2018 IPR000160 GGDEF domain VEA_000932 b56b8e3fd4dbd3f70eed3ed67b1c3e10 365 Gene3D G3DSA:3.30.70.270 213 365 2.8E-39 T 13-10-2018 VEA_000932 b56b8e3fd4dbd3f70eed3ed67b1c3e10 365 SUPERFAMILY SSF55073 222 363 7.3E-36 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_002405 a066ce5478c38d224cc9431d6a43656c 164 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 20 160 2.1E-46 T 13-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 VEA_002405 a066ce5478c38d224cc9431d6a43656c 164 Pfam PF03968 OstA-like protein 30 141 8.6E-29 T 13-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal VEA_002405 a066ce5478c38d224cc9431d6a43656c 164 Gene3D G3DSA:2.60.450.10 20 157 9.7E-41 T 13-10-2018 VEA_002405 a066ce5478c38d224cc9431d6a43656c 164 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 1 160 24.226 T 13-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 VEA_001518 25d314e2e2b3713fe44011a7d9ca28b3 204 SUPERFAMILY SSF53041 1 156 1.16E-28 T 13-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 VEA_001518 25d314e2e2b3713fe44011a7d9ca28b3 204 Gene3D G3DSA:3.40.50.1390 2 163 1.0E-31 T 13-10-2018 VEA_001518 25d314e2e2b3713fe44011a7d9ca28b3 204 Pfam PF00239 Resolvase, N terminal domain 4 156 1.4E-28 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VEA_001518 25d314e2e2b3713fe44011a7d9ca28b3 204 SMART SM00857 2 156 2.5E-38 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VEA_001518 25d314e2e2b3713fe44011a7d9ca28b3 204 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 13-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 VEA_000373 26b400b628a623b25b198b5ab5d37219 384 SUPERFAMILY SSF56645 1 240 6.68E-78 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 VEA_000373 26b400b628a623b25b198b5ab5d37219 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 377 2.4E-49 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VEA_000373 26b400b628a623b25b198b5ab5d37219 384 SUPERFAMILY SSF47203 225 378 1.35E-58 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 VEA_000373 26b400b628a623b25b198b5ab5d37219 384 Gene3D G3DSA:1.20.140.10 232 382 1.4E-53 T 13-10-2018 VEA_000373 26b400b628a623b25b198b5ab5d37219 384 PIRSF PIRSF016578 225 379 3.5E-13 T 13-10-2018 VEA_000373 26b400b628a623b25b198b5ab5d37219 384 PIRSF PIRSF016578 4 192 3.1E-11 T 13-10-2018 VEA_000373 26b400b628a623b25b198b5ab5d37219 384 Gene3D G3DSA:1.10.540.10 1 119 2.1E-34 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 VEA_000373 26b400b628a623b25b198b5ab5d37219 384 Gene3D G3DSA:2.40.110.10 120 231 5.8E-42 T 13-10-2018 VEA_000373 26b400b628a623b25b198b5ab5d37219 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 9.6E-24 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 VEA_000373 26b400b628a623b25b198b5ab5d37219 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 VEA_000373 26b400b628a623b25b198b5ab5d37219 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 5.7E-26 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 VEA_000373 26b400b628a623b25b198b5ab5d37219 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 VEA_004256 404066f0bb7e974bf8325b596a26efac 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 15.199 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VEA_004256 404066f0bb7e974bf8325b596a26efac 80 Gene3D G3DSA:1.10.287.1040 4 80 1.6E-22 T 13-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 VEA_004256 404066f0bb7e974bf8325b596a26efac 80 Pfam PF02609 Exonuclease VII small subunit 11 61 4.4E-18 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VEA_004256 404066f0bb7e974bf8325b596a26efac 80 PIRSF PIRSF006488 1 80 9.0E-21 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VEA_004256 404066f0bb7e974bf8325b596a26efac 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 50 6.0E-22 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VEA_004256 404066f0bb7e974bf8325b596a26efac 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 65 1.2E-20 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VEA_004256 404066f0bb7e974bf8325b596a26efac 80 SUPERFAMILY SSF116842 2 72 9.29E-21 T 13-10-2018 VEA_001829 6e26d1a26f8e7c1e8ef587d5fb1d5abb 405 Pfam PF13356 Arm DNA-binding domain 4 90 1.2E-12 T 13-10-2018 IPR025166 Integrase, DNA-binding domain VEA_001829 6e26d1a26f8e7c1e8ef587d5fb1d5abb 405 SUPERFAMILY SSF56349 98 394 3.53E-56 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VEA_001829 6e26d1a26f8e7c1e8ef587d5fb1d5abb 405 Gene3D G3DSA:1.10.443.10 201 402 3.4E-24 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VEA_001829 6e26d1a26f8e7c1e8ef587d5fb1d5abb 405 Gene3D G3DSA:3.30.160.390 2 91 2.2E-16 T 13-10-2018 IPR038488 Integrase, DNA-binding domain superfamily VEA_001829 6e26d1a26f8e7c1e8ef587d5fb1d5abb 405 Gene3D G3DSA:1.10.150.130 92 200 7.4E-30 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal VEA_001829 6e26d1a26f8e7c1e8ef587d5fb1d5abb 405 Pfam PF00589 Phage integrase family 204 381 3.1E-21 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VEA_002135 a4bc735897f6b26c492c60420123ebba 194 Pfam PF01914 MarC family integral membrane protein 3 192 2.5E-54 T 13-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VEA_002135 a4bc735897f6b26c492c60420123ebba 194 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 6 189 2.8E-29 T 13-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VEA_003136 ac3a249bb457d48684afdcd45ca01546 212 SMART SM00421 148 205 3.8E-21 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_003136 ac3a249bb457d48684afdcd45ca01546 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 3.6E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_003136 ac3a249bb457d48684afdcd45ca01546 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 3.6E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_003136 ac3a249bb457d48684afdcd45ca01546 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 3.6E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_003136 ac3a249bb457d48684afdcd45ca01546 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 205 3.9E-19 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_003136 ac3a249bb457d48684afdcd45ca01546 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_003136 ac3a249bb457d48684afdcd45ca01546 212 Gene3D G3DSA:3.40.50.12740 5 211 1.1E-66 T 13-10-2018 VEA_003136 ac3a249bb457d48684afdcd45ca01546 212 SUPERFAMILY SSF52172 4 135 1.15E-35 T 13-10-2018 IPR011006 CheY-like superfamily VEA_003136 ac3a249bb457d48684afdcd45ca01546 212 Pfam PF00072 Response regulator receiver domain 7 119 2.6E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_003136 ac3a249bb457d48684afdcd45ca01546 212 SUPERFAMILY SSF46894 139 211 3.27E-20 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEA_003136 ac3a249bb457d48684afdcd45ca01546 212 SMART SM00448 5 118 5.7E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_002009 26c92c227e99161afbf97322a94299b8 468 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 466 2.5E-187 T 13-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 VEA_002009 26c92c227e99161afbf97322a94299b8 468 Gene3D G3DSA:1.10.8.60 299 369 1.6E-24 T 13-10-2018 VEA_002009 26c92c227e99161afbf97322a94299b8 468 SUPERFAMILY SSF52540 133 344 5.35E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002009 26c92c227e99161afbf97322a94299b8 468 Gene3D G3DSA:3.40.50.300 118 297 9.7E-50 T 13-10-2018 VEA_002009 26c92c227e99161afbf97322a94299b8 468 SMART SM00760 376 445 3.4E-45 T 13-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 VEA_002009 26c92c227e99161afbf97322a94299b8 468 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 377 445 1.8E-32 T 13-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 VEA_002009 26c92c227e99161afbf97322a94299b8 468 Pfam PF00308 Bacterial dnaA protein 134 350 2.5E-98 T 13-10-2018 IPR013317 Chromosomal replication initiator protein DnaA VEA_002009 26c92c227e99161afbf97322a94299b8 468 Gene3D G3DSA:1.10.1750.10 375 468 1.5E-39 T 13-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 VEA_002009 26c92c227e99161afbf97322a94299b8 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 166 186 1.7E-54 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like VEA_002009 26c92c227e99161afbf97322a94299b8 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 198 212 1.7E-54 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like VEA_002009 26c92c227e99161afbf97322a94299b8 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 230 244 1.7E-54 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like VEA_002009 26c92c227e99161afbf97322a94299b8 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 264 291 1.7E-54 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like VEA_002009 26c92c227e99161afbf97322a94299b8 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 426 445 1.7E-54 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like VEA_002009 26c92c227e99161afbf97322a94299b8 468 SMART SM00382 165 378 4.7E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_002009 26c92c227e99161afbf97322a94299b8 468 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 467 34.591 T 13-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 VEA_002009 26c92c227e99161afbf97322a94299b8 468 Pfam PF11638 DnaA N-terminal domain 4 65 7.8E-20 T 13-10-2018 IPR024633 DnaA N-terminal domain VEA_002009 26c92c227e99161afbf97322a94299b8 468 SUPERFAMILY SSF48295 364 467 3.66E-38 T 13-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 VEA_002009 26c92c227e99161afbf97322a94299b8 468 ProSitePatterns PS01008 DnaA protein signature. 426 445 - T 13-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 VEA_002009 26c92c227e99161afbf97322a94299b8 468 Gene3D G3DSA:3.30.300.180 2 114 1.1E-41 T 13-10-2018 IPR038454 DnaA, N-terminal domain superfamily VEA_003598 37ba7f0ac8080c97a9fbcb7f42e1bd75 440 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 252 326 6.0E-6 T 13-10-2018 VEA_003598 37ba7f0ac8080c97a9fbcb7f42e1bd75 440 Pfam PF13186 Iron-sulfur cluster-binding domain 303 363 1.1E-7 T 13-10-2018 IPR023885 4Fe4S-binding SPASM domain VEA_003598 37ba7f0ac8080c97a9fbcb7f42e1bd75 440 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 18 409 1.2E-145 T 13-10-2018 VEA_003598 37ba7f0ac8080c97a9fbcb7f42e1bd75 440 SUPERFAMILY SSF102114 24 372 4.97E-38 T 13-10-2018 VEA_003598 37ba7f0ac8080c97a9fbcb7f42e1bd75 440 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 302 391 1.1E-17 T 13-10-2018 IPR023885 4Fe4S-binding SPASM domain VEA_003598 37ba7f0ac8080c97a9fbcb7f42e1bd75 440 Pfam PF04055 Radical SAM superfamily 24 196 9.3E-13 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VEA_003598 37ba7f0ac8080c97a9fbcb7f42e1bd75 440 Gene3D G3DSA:3.20.20.70 15 412 2.6E-110 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_001720 8cdcd737f9076fe59ef6e51b524c5913 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 2.3E-53 T 13-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_001720 8cdcd737f9076fe59ef6e51b524c5913 118 Gene3D G3DSA:4.10.910.10 72 118 1.3E-26 T 13-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001720 8cdcd737f9076fe59ef6e51b524c5913 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 3.9E-32 T 13-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001720 8cdcd737f9076fe59ef6e51b524c5913 118 PIRSF PIRSF002134 1 118 2.5E-41 T 13-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001720 8cdcd737f9076fe59ef6e51b524c5913 118 SUPERFAMILY SSF46946 2 114 3.24E-45 T 13-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 VEA_001720 8cdcd737f9076fe59ef6e51b524c5913 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 13-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001720 8cdcd737f9076fe59ef6e51b524c5913 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 27.128 T 13-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001720 8cdcd737f9076fe59ef6e51b524c5913 118 Gene3D G3DSA:1.10.8.50 1 71 5.2E-28 T 13-10-2018 VEA_004406 843cac833eefedd2f1c6c89680b753c5 358 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 9 346 3.1E-163 T 13-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VEA_004406 843cac833eefedd2f1c6c89680b753c5 358 PIRSF PIRSF001361 1 354 5.6E-165 T 13-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VEA_004406 843cac833eefedd2f1c6c89680b753c5 358 Pfam PF00793 DAHP synthetase I family 41 340 3.6E-105 T 13-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VEA_004406 843cac833eefedd2f1c6c89680b753c5 358 SUPERFAMILY SSF51569 8 345 7.01E-139 T 13-10-2018 VEA_004406 843cac833eefedd2f1c6c89680b753c5 358 Gene3D G3DSA:3.20.20.70 3 348 1.3E-157 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_002224 1aacc99d68a55f38a625f224dca7cfba 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 24.282 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VEA_002224 1aacc99d68a55f38a625f224dca7cfba 96 SUPERFAMILY SSF50129 1 96 2.24E-31 T 13-10-2018 IPR011032 GroES-like superfamily VEA_002224 1aacc99d68a55f38a625f224dca7cfba 96 SMART SM00883 2 95 5.2E-50 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VEA_002224 1aacc99d68a55f38a625f224dca7cfba 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 13-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 VEA_002224 1aacc99d68a55f38a625f224dca7cfba 96 Gene3D G3DSA:2.30.33.40 1 96 2.6E-36 T 13-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 VEA_002224 1aacc99d68a55f38a625f224dca7cfba 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 1.7E-31 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VEA_002224 1aacc99d68a55f38a625f224dca7cfba 96 PRINTS PR00297 10kDa chaperonin signature 25 46 3.7E-27 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VEA_002224 1aacc99d68a55f38a625f224dca7cfba 96 PRINTS PR00297 10kDa chaperonin signature 3 18 3.7E-27 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VEA_002224 1aacc99d68a55f38a625f224dca7cfba 96 PRINTS PR00297 10kDa chaperonin signature 60 72 3.7E-27 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VEA_002224 1aacc99d68a55f38a625f224dca7cfba 96 PRINTS PR00297 10kDa chaperonin signature 82 95 3.7E-27 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VEA_003397 3cb2ae19b78860589db24f15aec6db0c 270 Gene3D G3DSA:3.30.1240.10 87 192 4.0E-82 T 13-10-2018 VEA_003397 3cb2ae19b78860589db24f15aec6db0c 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 236 1.7E-26 T 13-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 VEA_003397 3cb2ae19b78860589db24f15aec6db0c 270 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 13-10-2018 VEA_003397 3cb2ae19b78860589db24f15aec6db0c 270 Gene3D G3DSA:3.40.50.1000 4 264 4.0E-82 T 13-10-2018 IPR023214 HAD superfamily VEA_003397 3cb2ae19b78860589db24f15aec6db0c 270 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 263 6.2E-63 T 13-10-2018 IPR000150 Cof family GO:0016787 VEA_003397 3cb2ae19b78860589db24f15aec6db0c 270 SUPERFAMILY SSF56784 1 268 1.44E-76 T 13-10-2018 IPR036412 HAD-like superfamily VEA_003397 3cb2ae19b78860589db24f15aec6db0c 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 263 9.3E-67 T 13-10-2018 VEA_003397 3cb2ae19b78860589db24f15aec6db0c 270 ProSitePatterns PS01229 Hypothetical cof family signature 2. 217 239 - T 13-10-2018 VEA_000677 a19a771975c78338b6d703adc3972b73 293 SUPERFAMILY SSF46785 2 109 5.17E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000677 a19a771975c78338b6d703adc3972b73 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.6E-17 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000677 a19a771975c78338b6d703adc3972b73 293 Gene3D G3DSA:1.10.10.10 1 91 1.6E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000677 a19a771975c78338b6d703adc3972b73 293 SUPERFAMILY SSF53850 89 292 8.14E-30 T 13-10-2018 VEA_000677 a19a771975c78338b6d703adc3972b73 293 Gene3D G3DSA:3.40.190.290 92 293 1.2E-23 T 13-10-2018 VEA_000677 a19a771975c78338b6d703adc3972b73 293 Pfam PF03466 LysR substrate binding domain 89 291 1.1E-27 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_002324 0e7eec5b90e64790855cf5bc2e4122c3 197 PIRSF PIRSF016482 1 197 5.7E-69 T 13-10-2018 IPR007445 Pilus assembly protein, PilO VEA_002324 0e7eec5b90e64790855cf5bc2e4122c3 197 Pfam PF04350 Pilus assembly protein, PilO 47 189 2.3E-45 T 13-10-2018 IPR007445 Pilus assembly protein, PilO VEA_002324 0e7eec5b90e64790855cf5bc2e4122c3 197 Gene3D G3DSA:3.30.70.60 92 197 6.2E-26 T 13-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 VEA_002194 5b83615ab0394480afecfb0399e9e91a 287 Pfam PF01207 Dihydrouridine synthase (Dus) 1 271 3.3E-97 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VEA_002194 5b83615ab0394480afecfb0399e9e91a 287 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 1 285 3.6E-114 T 13-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 VEA_002194 5b83615ab0394480afecfb0399e9e91a 287 SUPERFAMILY SSF51395 2 284 2.64E-76 T 13-10-2018 VEA_002194 5b83615ab0394480afecfb0399e9e91a 287 Gene3D G3DSA:3.20.20.70 1 214 1.5E-64 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_002194 5b83615ab0394480afecfb0399e9e91a 287 Gene3D G3DSA:1.10.1200.80 216 287 5.9E-8 T 13-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 VEA_002194 5b83615ab0394480afecfb0399e9e91a 287 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 59 77 - T 13-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 VEA_002194 5b83615ab0394480afecfb0399e9e91a 287 PIRSF PIRSF006621 1 286 7.8E-88 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VEA_000004 72cb94e44de1849b83f07466143d2ff8 191 Gene3D G3DSA:1.10.357.10 72 189 3.7E-14 T 13-10-2018 VEA_000004 72cb94e44de1849b83f07466143d2ff8 191 SUPERFAMILY SSF48498 83 174 1.97E-13 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VEA_000004 72cb94e44de1849b83f07466143d2ff8 191 SUPERFAMILY SSF46689 2 65 2.0E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_000004 72cb94e44de1849b83f07466143d2ff8 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 56 9.5E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEA_000004 72cb94e44de1849b83f07466143d2ff8 191 Gene3D G3DSA:1.10.10.60 1 65 4.2E-21 T 13-10-2018 VEA_000481 cc4b38131a38bcfc58f4a3d8210e6548 217 Gene3D G3DSA:1.10.286.10 1 84 1.3E-36 T 13-10-2018 VEA_000481 cc4b38131a38bcfc58f4a3d8210e6548 217 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 34 217 33.746 T 13-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VEA_000481 cc4b38131a38bcfc58f4a3d8210e6548 217 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 38 216 3.4E-79 T 13-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VEA_000481 cc4b38131a38bcfc58f4a3d8210e6548 217 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 144 154 - T 13-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VEA_000481 cc4b38131a38bcfc58f4a3d8210e6548 217 SUPERFAMILY SSF55620 10 216 8.15E-74 T 13-10-2018 VEA_000481 cc4b38131a38bcfc58f4a3d8210e6548 217 Gene3D G3DSA:3.30.1130.10 85 217 2.6E-52 T 13-10-2018 VEA_000481 cc4b38131a38bcfc58f4a3d8210e6548 217 Pfam PF01227 GTP cyclohydrolase I 38 215 1.9E-63 T 13-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VEA_000481 cc4b38131a38bcfc58f4a3d8210e6548 217 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 96 112 - T 13-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VEA_003608 92daa24a3026c0a768385fd0c14ff2f9 626 SMART SM00100 17 134 2.4E-10 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain VEA_003608 92daa24a3026c0a768385fd0c14ff2f9 626 SUPERFAMILY SSF51206 7 133 2.09E-27 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like VEA_003608 92daa24a3026c0a768385fd0c14ff2f9 626 SMART SM00116 159 215 0.0036 T 13-10-2018 IPR000644 CBS domain VEA_003608 92daa24a3026c0a768385fd0c14ff2f9 626 SMART SM00116 232 279 1.6E-4 T 13-10-2018 IPR000644 CBS domain VEA_003608 92daa24a3026c0a768385fd0c14ff2f9 626 Gene3D G3DSA:3.10.580.10 144 281 2.0E-33 T 13-10-2018 VEA_003608 92daa24a3026c0a768385fd0c14ff2f9 626 Gene3D G3DSA:2.60.120.10 2 135 2.3E-23 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VEA_003608 92daa24a3026c0a768385fd0c14ff2f9 626 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 478 621 1.2E-43 T 13-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding VEA_003608 92daa24a3026c0a768385fd0c14ff2f9 626 Pfam PF00571 CBS domain 153 211 2.7E-8 T 13-10-2018 IPR000644 CBS domain VEA_003608 92daa24a3026c0a768385fd0c14ff2f9 626 Pfam PF00571 CBS domain 225 277 4.2E-11 T 13-10-2018 IPR000644 CBS domain VEA_003608 92daa24a3026c0a768385fd0c14ff2f9 626 Pfam PF00027 Cyclic nucleotide-binding domain 37 118 6.4E-13 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain VEA_003608 92daa24a3026c0a768385fd0c14ff2f9 626 SUPERFAMILY SSF54631 146 278 6.7E-29 T 13-10-2018 VEA_003608 92daa24a3026c0a768385fd0c14ff2f9 626 Pfam PF03445 Putative nucleotidyltransferase DUF294 304 441 2.7E-47 T 13-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 VEA_000501 0e068cf55525d0b8f9a56c643d846962 137 SUPERFAMILY SSF75620 7 117 9.42E-13 T 13-10-2018 VEA_000501 0e068cf55525d0b8f9a56c643d846962 137 Pfam PF00472 RF-1 domain 7 132 3.9E-24 T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VEA_000501 0e068cf55525d0b8f9a56c643d846962 137 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VEA_000501 0e068cf55525d0b8f9a56c643d846962 137 Gene3D G3DSA:3.30.160.20 1 136 1.5E-39 T 13-10-2018 VEA_002899 2749a1bc22e347d5bec14d7d23322d2c 94 Gene3D G3DSA:3.30.70.100 1 94 1.5E-28 T 13-10-2018 VEA_002899 2749a1bc22e347d5bec14d7d23322d2c 94 SUPERFAMILY SSF54909 1 93 3.01E-27 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel VEA_002899 2749a1bc22e347d5bec14d7d23322d2c 94 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 71 5.5E-18 T 13-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain VEA_001956 df661f0668886a2ca35178ea717d0590 274 PIRSF PIRSF000477 2 273 3.4E-103 T 13-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 VEA_001956 df661f0668886a2ca35178ea717d0590 274 Gene3D G3DSA:3.40.50.1580 2 273 4.4E-102 T 13-10-2018 VEA_001956 df661f0668886a2ca35178ea717d0590 274 TIGRFAM TIGR01699 XAPA: xanthosine phosphorylase 24 271 9.1E-122 T 13-10-2018 IPR010943 Xanthosine phosphorylase GO:0004731|GO:0005737|GO:0055086 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VEA_001956 df661f0668886a2ca35178ea717d0590 274 SUPERFAMILY SSF53167 4 271 2.64E-82 T 13-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 VEA_001956 df661f0668886a2ca35178ea717d0590 274 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 24 270 8.7E-99 T 13-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 VEA_001956 df661f0668886a2ca35178ea717d0590 274 Pfam PF01048 Phosphorylase superfamily 24 270 9.5E-44 T 13-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VEA_004508 817d0916f6abc15b67010c3a93ce72ee 421 PIRSF PIRSF038885 1 421 7.2E-153 T 13-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 VEA_004508 817d0916f6abc15b67010c3a93ce72ee 421 SUPERFAMILY SSF81342 6 296 1.22E-92 T 13-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 VEA_004508 817d0916f6abc15b67010c3a93ce72ee 421 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 295 396 6.2E-41 T 13-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 VEA_004508 817d0916f6abc15b67010c3a93ce72ee 421 SUPERFAMILY SSF81648 297 412 1.18E-33 T 13-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 VEA_004508 817d0916f6abc15b67010c3a93ce72ee 421 Pfam PF00033 Cytochrome b/b6/petB 23 211 5.1E-66 T 13-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 VEA_004508 817d0916f6abc15b67010c3a93ce72ee 421 Gene3D G3DSA:1.20.810.10 1 421 1.3E-149 T 13-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 VEA_000524 9c96ad92bbe3f4b62814a3e18c9be067 612 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 348 590 1.3E-73 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VEA_000524 9c96ad92bbe3f4b62814a3e18c9be067 612 Gene3D G3DSA:3.30.1360.200 288 428 2.2E-47 T 13-10-2018 VEA_000524 9c96ad92bbe3f4b62814a3e18c9be067 612 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 134 598 8.0E-132 T 13-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 VEA_000524 9c96ad92bbe3f4b62814a3e18c9be067 612 Gene3D G3DSA:3.30.70.3400 230 434 2.2E-47 T 13-10-2018 VEA_000524 9c96ad92bbe3f4b62814a3e18c9be067 612 SUPERFAMILY SSF82866 407 604 3.92E-41 T 13-10-2018 VEA_000524 9c96ad92bbe3f4b62814a3e18c9be067 612 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 15 612 42.874 T 13-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 VEA_000524 9c96ad92bbe3f4b62814a3e18c9be067 612 Pfam PF07549 SecD/SecF GG Motif 128 150 2.1E-4 T 13-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VEA_000524 9c96ad92bbe3f4b62814a3e18c9be067 612 Pfam PF02355 Protein export membrane protein 430 598 5.0E-18 T 13-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VEA_000524 9c96ad92bbe3f4b62814a3e18c9be067 612 Pfam PF13721 SecD export protein N-terminal TM region 14 109 4.8E-23 T 13-10-2018 IPR027398 SecD export protein N-terminal TM domain VEA_000655 83e4f9958f1b2e229450deac670903d3 1020 SUPERFAMILY SSF82693 550 600 8.89E-7 T 13-10-2018 VEA_000655 83e4f9958f1b2e229450deac670903d3 1020 Gene3D G3DSA:1.20.1640.10 13 506 1.2E-229 T 13-10-2018 VEA_000655 83e4f9958f1b2e229450deac670903d3 1020 SUPERFAMILY SSF82714 707 781 1.07E-7 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_000655 83e4f9958f1b2e229450deac670903d3 1020 Gene3D G3DSA:3.30.2090.10 180 274 1.2E-229 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_000655 83e4f9958f1b2e229450deac670903d3 1020 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 1.2E-19 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_000655 83e4f9958f1b2e229450deac670903d3 1020 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 1.2E-19 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_000655 83e4f9958f1b2e229450deac670903d3 1020 PRINTS PR00702 Acriflavin resistance protein family signature 468 491 1.2E-19 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_000655 83e4f9958f1b2e229450deac670903d3 1020 PRINTS PR00702 Acriflavin resistance protein family signature 390 414 1.2E-19 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_000655 83e4f9958f1b2e229450deac670903d3 1020 Gene3D G3DSA:3.30.70.1320 137 332 1.2E-229 T 13-10-2018 VEA_000655 83e4f9958f1b2e229450deac670903d3 1020 SUPERFAMILY SSF82866 784 1003 1.57E-44 T 13-10-2018 VEA_000655 83e4f9958f1b2e229450deac670903d3 1020 Gene3D G3DSA:1.20.1640.10 507 998 1.2E-229 T 13-10-2018 VEA_000655 83e4f9958f1b2e229450deac670903d3 1020 Gene3D G3DSA:3.30.70.1440 650 846 1.2E-229 T 13-10-2018 VEA_000655 83e4f9958f1b2e229450deac670903d3 1020 SUPERFAMILY SSF82693 139 326 4.19E-14 T 13-10-2018 VEA_000655 83e4f9958f1b2e229450deac670903d3 1020 Gene3D G3DSA:3.30.70.1430 551 649 1.2E-229 T 13-10-2018 VEA_000655 83e4f9958f1b2e229450deac670903d3 1020 SUPERFAMILY SSF82866 298 495 1.57E-31 T 13-10-2018 VEA_000655 83e4f9958f1b2e229450deac670903d3 1020 Gene3D G3DSA:3.30.70.1430 41 796 1.2E-229 T 13-10-2018 VEA_000655 83e4f9958f1b2e229450deac670903d3 1020 Gene3D G3DSA:3.30.2090.10 701 788 1.2E-229 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_000655 83e4f9958f1b2e229450deac670903d3 1020 Pfam PF00873 AcrB/AcrD/AcrF family 5 1000 1.2E-152 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_000655 83e4f9958f1b2e229450deac670903d3 1020 SUPERFAMILY SSF82693 41 134 1.04E-16 T 13-10-2018 VEA_000655 83e4f9958f1b2e229450deac670903d3 1020 SUPERFAMILY SSF82714 185 271 1.44E-13 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_000448 be5be60a0a781e34f4cf62fdc853771e 692 Gene3D G3DSA:3.30.1920.30 229 288 8.9E-95 T 13-10-2018 VEA_000448 be5be60a0a781e34f4cf62fdc853771e 692 Gene3D G3DSA:2.30.110.50 17 332 8.9E-95 T 13-10-2018 VEA_000448 be5be60a0a781e34f4cf62fdc853771e 692 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 19 505 2.4E-130 T 13-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein VEA_000448 be5be60a0a781e34f4cf62fdc853771e 692 Gene3D G3DSA:2.40.50.230 359 458 6.9E-43 T 13-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily VEA_000448 be5be60a0a781e34f4cf62fdc853771e 692 Gene3D G3DSA:3.55.50.10 96 187 8.9E-95 T 13-10-2018 VEA_000448 be5be60a0a781e34f4cf62fdc853771e 692 SUPERFAMILY SSF69279 7 183 3.4E-58 T 13-10-2018 VEA_000448 be5be60a0a781e34f4cf62fdc853771e 692 Pfam PF05954 Phage late control gene D protein (GPD) 26 331 1.1E-78 T 13-10-2018 VEA_000448 be5be60a0a781e34f4cf62fdc853771e 692 SUPERFAMILY SSF69279 200 364 1.87E-32 T 13-10-2018 VEA_000448 be5be60a0a781e34f4cf62fdc853771e 692 SUPERFAMILY SSF69255 367 454 4.18E-32 T 13-10-2018 VEA_000448 be5be60a0a781e34f4cf62fdc853771e 692 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 7 522 3.1E-200 T 13-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset VEA_000448 be5be60a0a781e34f4cf62fdc853771e 692 SUPERFAMILY SSF69349 444 683 1.18E-46 T 13-10-2018 VEA_002196 9cb52a23fe5ce37a4238ab686e83cd9b 447 Gene3D G3DSA:3.30.470.20 86 433 9.6E-157 T 13-10-2018 VEA_002196 9cb52a23fe5ce37a4238ab686e83cd9b 447 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 2.9E-43 T 13-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VEA_002196 9cb52a23fe5ce37a4238ab686e83cd9b 447 SUPERFAMILY SSF52440 1 113 5.47E-46 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VEA_002196 9cb52a23fe5ce37a4238ab686e83cd9b 447 SUPERFAMILY SSF56059 83 346 1.41E-70 T 13-10-2018 VEA_002196 9cb52a23fe5ce37a4238ab686e83cd9b 447 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 1.6E-244 T 13-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 VEA_002196 9cb52a23fe5ce37a4238ab686e83cd9b 447 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VEA_002196 9cb52a23fe5ce37a4238ab686e83cd9b 447 Gene3D G3DSA:3.30.1490.20 131 203 9.6E-157 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VEA_002196 9cb52a23fe5ce37a4238ab686e83cd9b 447 Gene3D G3DSA:3.40.50.20 1 85 5.7E-34 T 13-10-2018 VEA_002196 9cb52a23fe5ce37a4238ab686e83cd9b 447 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VEA_002196 9cb52a23fe5ce37a4238ab686e83cd9b 447 SMART SM00878 336 441 1.5E-64 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VEA_002196 9cb52a23fe5ce37a4238ab686e83cd9b 447 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 1.4E-37 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VEA_002196 9cb52a23fe5ce37a4238ab686e83cd9b 447 SUPERFAMILY SSF51246 331 444 1.52E-43 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 VEA_002196 9cb52a23fe5ce37a4238ab686e83cd9b 447 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 1.3E-84 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VEA_004267 27a0fa8ed58ff75e1ae2ab99c5420e34 411 Gene3D G3DSA:3.40.605.10 10 403 1.9E-151 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VEA_004267 27a0fa8ed58ff75e1ae2ab99c5420e34 411 Gene3D G3DSA:3.40.309.10 218 368 1.9E-151 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VEA_004267 27a0fa8ed58ff75e1ae2ab99c5420e34 411 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 5 400 1.5E-167 T 13-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VEA_004267 27a0fa8ed58ff75e1ae2ab99c5420e34 411 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 317 338 - T 13-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VEA_004267 27a0fa8ed58ff75e1ae2ab99c5420e34 411 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 1 410 38.021 T 13-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VEA_004267 27a0fa8ed58ff75e1ae2ab99c5420e34 411 Pfam PF00171 Aldehyde dehydrogenase family 3 274 8.9E-15 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VEA_004267 27a0fa8ed58ff75e1ae2ab99c5420e34 411 SUPERFAMILY SSF53720 2 403 3.8E-110 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VEA_004267 27a0fa8ed58ff75e1ae2ab99c5420e34 411 PIRSF PIRSF000151 1 411 3.5E-164 T 13-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 VEA_002449 3102d11c44b77841ad7246dcc8bed6ac 306 Gene3D G3DSA:3.40.710.10 2 306 4.3E-110 T 13-10-2018 VEA_002449 3102d11c44b77841ad7246dcc8bed6ac 306 Hamap MF_00313 Glutaminase [glsA]. 4 306 47.491 T 13-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 VEA_002449 3102d11c44b77841ad7246dcc8bed6ac 306 SUPERFAMILY SSF56601 4 306 2.38E-114 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VEA_002449 3102d11c44b77841ad7246dcc8bed6ac 306 TIGRFAM TIGR03814 Gln_ase: glutaminase A 8 306 1.4E-130 T 13-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 VEA_002449 3102d11c44b77841ad7246dcc8bed6ac 306 Pfam PF04960 Glutaminase 22 306 3.4E-113 T 13-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 VEA_002314 e7897632245a70a1b6835e1b855d82ed 404 Hamap MF_00005 Argininosuccinate synthase [argG]. 6 402 51.872 T 13-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VEA_002314 e7897632245a70a1b6835e1b855d82ed 404 Gene3D G3DSA:3.90.1260.10 68 356 1.2E-145 T 13-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VEA_002314 e7897632245a70a1b6835e1b855d82ed 404 SUPERFAMILY SSF52402 7 170 7.06E-48 T 13-10-2018 VEA_002314 e7897632245a70a1b6835e1b855d82ed 404 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 12 20 - T 13-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VEA_002314 e7897632245a70a1b6835e1b855d82ed 404 TIGRFAM TIGR00032 argG: argininosuccinate synthase 8 395 4.1E-136 T 13-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VEA_002314 e7897632245a70a1b6835e1b855d82ed 404 Gene3D G3DSA:3.40.50.620 9 177 1.2E-145 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_002314 e7897632245a70a1b6835e1b855d82ed 404 SUPERFAMILY SSF69864 177 402 7.59E-88 T 13-10-2018 VEA_002314 e7897632245a70a1b6835e1b855d82ed 404 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 121 132 - T 13-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VEA_002314 e7897632245a70a1b6835e1b855d82ed 404 Gene3D G3DSA:1.20.5.470 368 403 5.0E-8 T 13-10-2018 VEA_002314 e7897632245a70a1b6835e1b855d82ed 404 Pfam PF00764 Arginosuccinate synthase 10 396 6.7E-146 T 13-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VEA_002797 f1a863a643c474ca6865ca192e241dae 378 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 99 137 - T 13-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VEA_002797 f1a863a643c474ca6865ca192e241dae 378 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 377 51.91 T 13-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 VEA_002797 f1a863a643c474ca6865ca192e241dae 378 SUPERFAMILY SSF53187 6 376 6.29E-67 T 13-10-2018 VEA_002797 f1a863a643c474ca6865ca192e241dae 378 SUPERFAMILY SSF55031 181 291 2.09E-28 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VEA_002797 f1a863a643c474ca6865ca192e241dae 378 Gene3D G3DSA:3.40.630.10 9 364 1.8E-128 T 13-10-2018 VEA_002797 f1a863a643c474ca6865ca192e241dae 378 Gene3D G3DSA:3.30.70.360 181 294 1.8E-128 T 13-10-2018 VEA_002797 f1a863a643c474ca6865ca192e241dae 378 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 7 375 5.3E-178 T 13-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 VEA_002797 f1a863a643c474ca6865ca192e241dae 378 Pfam PF07687 Peptidase dimerisation domain 177 284 2.7E-22 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain VEA_002797 f1a863a643c474ca6865ca192e241dae 378 Pfam PF01546 Peptidase family M20/M25/M40 64 373 2.0E-46 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 VEA_000830 719ad59cb8b6b3061e8dd08c20bf9eaa 401 PRINTS PR01036 Tetracycline resistance protein TetB signature 280 304 9.7E-5 T 13-10-2018 VEA_000830 719ad59cb8b6b3061e8dd08c20bf9eaa 401 PRINTS PR01036 Tetracycline resistance protein TetB signature 73 95 9.7E-5 T 13-10-2018 VEA_000830 719ad59cb8b6b3061e8dd08c20bf9eaa 401 PRINTS PR01036 Tetracycline resistance protein TetB signature 134 158 9.7E-5 T 13-10-2018 VEA_000830 719ad59cb8b6b3061e8dd08c20bf9eaa 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 9 386 5.5E-61 T 13-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 VEA_000830 719ad59cb8b6b3061e8dd08c20bf9eaa 401 SUPERFAMILY SSF103473 9 389 8.76E-59 T 13-10-2018 IPR036259 MFS transporter superfamily VEA_000830 719ad59cb8b6b3061e8dd08c20bf9eaa 401 Gene3D G3DSA:1.20.1720.10 10 387 2.5E-98 T 13-10-2018 VEA_000830 719ad59cb8b6b3061e8dd08c20bf9eaa 401 Pfam PF07690 Major Facilitator Superfamily 15 354 4.0E-46 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEA_000422 66a2015bce77c83b2b14a27d6cb9e914 257 Pfam PF02311 AraC-like ligand binding domain 21 94 1.9E-6 T 13-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VEA_000422 66a2015bce77c83b2b14a27d6cb9e914 257 SUPERFAMILY SSF46689 154 206 2.6E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_000422 66a2015bce77c83b2b14a27d6cb9e914 257 Gene3D G3DSA:1.10.10.60 154 256 5.3E-20 T 13-10-2018 VEA_000422 66a2015bce77c83b2b14a27d6cb9e914 257 SUPERFAMILY SSF51182 30 80 2.31E-7 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily VEA_000422 66a2015bce77c83b2b14a27d6cb9e914 257 SUPERFAMILY SSF46689 207 254 2.8E-7 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_000422 66a2015bce77c83b2b14a27d6cb9e914 257 SMART SM00342 171 253 6.5E-18 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_000422 66a2015bce77c83b2b14a27d6cb9e914 257 Pfam PF12833 Helix-turn-helix domain 177 254 4.1E-18 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_000422 66a2015bce77c83b2b14a27d6cb9e914 257 Gene3D G3DSA:2.60.120.10 6 85 3.6E-6 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VEA_004047 2f9f41f3316c5c178235cdd507b115e4 445 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VEA_004047 2f9f41f3316c5c178235cdd507b115e4 445 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 168 181 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VEA_004047 2f9f41f3316c5c178235cdd507b115e4 445 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VEA_004047 2f9f41f3316c5c178235cdd507b115e4 445 SUPERFAMILY SSF52540 144 373 7.96E-68 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_004047 2f9f41f3316c5c178235cdd507b115e4 445 Pfam PF00158 Sigma-54 interaction domain 144 310 3.4E-69 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VEA_004047 2f9f41f3316c5c178235cdd507b115e4 445 Gene3D G3DSA:1.10.10.60 387 442 2.0E-13 T 13-10-2018 VEA_004047 2f9f41f3316c5c178235cdd507b115e4 445 Pfam PF00072 Response regulator receiver domain 4 114 4.7E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_004047 2f9f41f3316c5c178235cdd507b115e4 445 SUPERFAMILY SSF52172 2 188 1.85E-37 T 13-10-2018 IPR011006 CheY-like superfamily VEA_004047 2f9f41f3316c5c178235cdd507b115e4 445 Gene3D G3DSA:3.40.50.300 133 314 3.0E-61 T 13-10-2018 VEA_004047 2f9f41f3316c5c178235cdd507b115e4 445 SMART SM00382 164 307 1.2E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_004047 2f9f41f3316c5c178235cdd507b115e4 445 Gene3D G3DSA:3.40.50.2300 1 129 1.5E-33 T 13-10-2018 VEA_004047 2f9f41f3316c5c178235cdd507b115e4 445 Gene3D G3DSA:1.10.8.60 315 379 7.5E-21 T 13-10-2018 VEA_004047 2f9f41f3316c5c178235cdd507b115e4 445 Pfam PF02954 Bacterial regulatory protein, Fis family 397 437 4.6E-7 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEA_004047 2f9f41f3316c5c178235cdd507b115e4 445 SMART SM00448 2 114 5.7E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_004047 2f9f41f3316c5c178235cdd507b115e4 445 SUPERFAMILY SSF46689 355 440 4.35E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_000624 0c31b8904d14f09771b1c5991a685797 374 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 344 1.8E-95 T 13-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 VEA_000624 0c31b8904d14f09771b1c5991a685797 374 SUPERFAMILY SSF51395 3 367 1.1E-124 T 13-10-2018 VEA_000624 0c31b8904d14f09771b1c5991a685797 374 Gene3D G3DSA:3.20.20.70 6 373 3.8E-139 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_001643 047785c1294b998cf2077227f9d54257 610 Pfam PF13522 Glutamine amidotransferase domain 54 174 1.9E-21 T 13-10-2018 VEA_001643 047785c1294b998cf2077227f9d54257 610 SUPERFAMILY SSF53697 245 610 1.86E-113 T 13-10-2018 VEA_001643 047785c1294b998cf2077227f9d54257 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 5.4E-258 T 13-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 VEA_001643 047785c1294b998cf2077227f9d54257 610 Gene3D G3DSA:3.40.50.10490 448 595 3.9E-144 T 13-10-2018 VEA_001643 047785c1294b998cf2077227f9d54257 610 Pfam PF01380 SIS domain 463 592 3.5E-24 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VEA_001643 047785c1294b998cf2077227f9d54257 610 Pfam PF01380 SIS domain 290 419 1.2E-32 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VEA_001643 047785c1294b998cf2077227f9d54257 610 SUPERFAMILY SSF56235 2 234 5.4E-76 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VEA_001643 047785c1294b998cf2077227f9d54257 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 40.427 T 13-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 VEA_001643 047785c1294b998cf2077227f9d54257 610 Gene3D G3DSA:3.40.50.10490 249 609 3.9E-144 T 13-10-2018 VEA_001643 047785c1294b998cf2077227f9d54257 610 Gene3D G3DSA:3.60.20.10 2 241 9.8E-82 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VEA_001903 4d7506c707bb7e4fc9a339bbec4dd662 609 SUPERFAMILY SSF52540 5 211 7.83E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001903 4d7506c707bb7e4fc9a339bbec4dd662 609 Pfam PF00009 Elongation factor Tu GTP binding domain 8 196 8.6E-57 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_001903 4d7506c707bb7e4fc9a339bbec4dd662 609 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.8E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_001903 4d7506c707bb7e4fc9a339bbec4dd662 609 PRINTS PR00315 GTP-binding elongation factor signature 91 102 1.8E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_001903 4d7506c707bb7e4fc9a339bbec4dd662 609 PRINTS PR00315 GTP-binding elongation factor signature 11 24 1.8E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_001903 4d7506c707bb7e4fc9a339bbec4dd662 609 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.8E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_001903 4d7506c707bb7e4fc9a339bbec4dd662 609 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.8E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_001903 4d7506c707bb7e4fc9a339bbec4dd662 609 Pfam PF00679 Elongation factor G C-terminus 399 480 1.5E-21 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like VEA_001903 4d7506c707bb7e4fc9a339bbec4dd662 609 SUPERFAMILY SSF54980 306 391 5.4E-16 T 13-10-2018 IPR035647 EF-G domain III/V-like VEA_001903 4d7506c707bb7e4fc9a339bbec4dd662 609 Gene3D G3DSA:2.40.50.250 487 603 2.0E-129 T 13-10-2018 VEA_001903 4d7506c707bb7e4fc9a339bbec4dd662 609 Pfam PF03144 Elongation factor Tu domain 2 223 293 7.6E-10 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VEA_001903 4d7506c707bb7e4fc9a339bbec4dd662 609 SUPERFAMILY SSF50447 156 303 1.48E-32 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VEA_001903 4d7506c707bb7e4fc9a339bbec4dd662 609 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site VEA_001903 4d7506c707bb7e4fc9a339bbec4dd662 609 Gene3D G3DSA:3.30.70.870 310 594 2.0E-129 T 13-10-2018 VEA_001903 4d7506c707bb7e4fc9a339bbec4dd662 609 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 155 2.9E-24 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VEA_001903 4d7506c707bb7e4fc9a339bbec4dd662 609 Gene3D G3DSA:3.30.70.240 393 486 2.0E-129 T 13-10-2018 VEA_001903 4d7506c707bb7e4fc9a339bbec4dd662 609 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 9 603 1.1E-293 T 13-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 VEA_001903 4d7506c707bb7e4fc9a339bbec4dd662 609 SUPERFAMILY SSF54980 402 516 2.3E-26 T 13-10-2018 IPR035647 EF-G domain III/V-like VEA_001903 4d7506c707bb7e4fc9a339bbec4dd662 609 Gene3D G3DSA:2.40.30.10 203 303 2.7E-34 T 13-10-2018 VEA_001903 4d7506c707bb7e4fc9a339bbec4dd662 609 Gene3D G3DSA:3.40.50.300 5 202 2.7E-68 T 13-10-2018 VEA_002845 6d05e574d042da6db7f99dad2be8650a 161 SUPERFAMILY SSF82093 30 142 4.05E-38 T 13-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 VEA_002845 6d05e574d042da6db7f99dad2be8650a 161 Gene3D G3DSA:2.40.50.140 30 142 2.6E-39 T 13-10-2018 VEA_002845 6d05e574d042da6db7f99dad2be8650a 161 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 146 32.157 T 13-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 VEA_002845 6d05e574d042da6db7f99dad2be8650a 161 Pfam PF03100 CcmE 4 136 2.6E-44 T 13-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 VEA_003936 84440c8c71c811f7a1aeea4b3c411528 445 SUPERFAMILY SSF140570 124 286 3.27E-76 T 13-10-2018 IPR036141 MukF, middle domain superfamily VEA_003936 84440c8c71c811f7a1aeea4b3c411528 445 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 6 445 54.388 T 13-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 VEA_003936 84440c8c71c811f7a1aeea4b3c411528 445 Pfam PF03882 MukF winged-helix domain 10 122 3.0E-53 T 13-10-2018 IPR033439 Chromosome partition protein MukF, winged-helix domain VEA_003936 84440c8c71c811f7a1aeea4b3c411528 445 Pfam PF17193 MukF C-terminal domain 288 445 2.2E-77 T 13-10-2018 IPR033441 Chromosome partition protein MukF, C-terminal domain VEA_003936 84440c8c71c811f7a1aeea4b3c411528 445 PIRSF PIRSF018282 1 445 2.1E-247 T 13-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 VEA_003936 84440c8c71c811f7a1aeea4b3c411528 445 Pfam PF17192 MukF middle domain 126 286 1.6E-78 T 13-10-2018 IPR033440 Chromosome partition protein MukF, middle domain VEA_003936 84440c8c71c811f7a1aeea4b3c411528 445 Gene3D G3DSA:1.20.58.590 124 316 1.5E-80 T 13-10-2018 IPR036141 MukF, middle domain superfamily VEA_003936 84440c8c71c811f7a1aeea4b3c411528 445 Gene3D G3DSA:1.10.225.40 358 445 4.3E-37 T 13-10-2018 IPR038198 MukF, C-terminal domain superfamily VEA_003936 84440c8c71c811f7a1aeea4b3c411528 445 SUPERFAMILY SSF46785 13 123 4.49E-44 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_003936 84440c8c71c811f7a1aeea4b3c411528 445 Gene3D G3DSA:1.10.10.10 29 123 4.2E-45 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_004086 262933049ca045c5a4a9cde323fb849d 220 Gene3D G3DSA:2.160.20.70 113 219 6.9E-31 T 13-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 VEA_004086 262933049ca045c5a4a9cde323fb849d 220 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 115 215 3.0E-32 T 13-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 VEA_004086 262933049ca045c5a4a9cde323fb849d 220 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 102 1.4E-31 T 13-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 VEA_004086 262933049ca045c5a4a9cde323fb849d 220 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 4 219 28.227 T 13-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 VEA_004086 262933049ca045c5a4a9cde323fb849d 220 SUPERFAMILY SSF63848 113 216 6.28E-30 T 13-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 VEA_004086 262933049ca045c5a4a9cde323fb849d 220 Gene3D G3DSA:3.30.750.120 2 112 1.4E-34 T 13-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily VEA_004086 262933049ca045c5a4a9cde323fb849d 220 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 5 218 2.0E-79 T 13-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 VEA_002767 ac943069acb385004afc20ec46cf6344 281 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 66 270 1.2E-7 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VEA_002767 ac943069acb385004afc20ec46cf6344 281 SUPERFAMILY SSF56219 61 277 1.05E-21 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VEA_002767 ac943069acb385004afc20ec46cf6344 281 Hamap MF_01119 UPF0294 protein YafD [yafD]. 1 278 56.456 T 13-10-2018 IPR022958 Uncharacterised protein family UPF0294 VEA_002767 ac943069acb385004afc20ec46cf6344 281 Gene3D G3DSA:3.60.10.10 60 281 4.4E-17 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VEA_000032 5ad906106c5810cbdf51dbc268fdd06d 377 Pfam PF00149 Calcineurin-like phosphoesterase 1 218 7.3E-16 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VEA_000032 5ad906106c5810cbdf51dbc268fdd06d 377 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 268 351 6.8E-9 T 13-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain VEA_000032 5ad906106c5810cbdf51dbc268fdd06d 377 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 245 1.5E-58 T 13-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 VEA_000032 5ad906106c5810cbdf51dbc268fdd06d 377 SUPERFAMILY SSF56300 1 320 2.48E-61 T 13-10-2018 VEA_000032 5ad906106c5810cbdf51dbc268fdd06d 377 Gene3D G3DSA:3.60.21.10 1 265 4.1E-81 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like VEA_003924 db95b92e5914c35273c11133376d1569 173 Gene3D G3DSA:3.30.420.10 2 159 7.4E-53 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VEA_003924 db95b92e5914c35273c11133376d1569 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 4.7E-63 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VEA_003924 db95b92e5914c35273c11133376d1569 173 SUPERFAMILY SSF53098 3 156 3.03E-55 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VEA_003924 db95b92e5914c35273c11133376d1569 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 47.654 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VEA_003924 db95b92e5914c35273c11133376d1569 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 155 3.5E-75 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VEA_003924 db95b92e5914c35273c11133376d1569 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 1.5E-42 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VEA_003924 db95b92e5914c35273c11133376d1569 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 1.5E-42 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VEA_003924 db95b92e5914c35273c11133376d1569 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 1.5E-42 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VEA_003924 db95b92e5914c35273c11133376d1569 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 1.5E-42 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VEA_003924 db95b92e5914c35273c11133376d1569 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 1.5E-42 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VEA_003924 db95b92e5914c35273c11133376d1569 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 13-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 VEA_001623 8ac48cd115a663935009abfd64830269 588 SUPERFAMILY SSF117023 455 586 1.44E-44 T 13-10-2018 VEA_001623 8ac48cd115a663935009abfd64830269 588 SMART SM00493 266 337 3.6E-18 T 13-10-2018 IPR006171 TOPRIM domain VEA_001623 8ac48cd115a663935009abfd64830269 588 Gene3D G3DSA:3.90.580.10 1 102 1.2E-39 T 13-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 VEA_001623 8ac48cd115a663935009abfd64830269 588 Hamap MF_00974 DNA primase [dnaG]. 4 584 29.764 T 13-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 VEA_001623 8ac48cd115a663935009abfd64830269 588 Gene3D G3DSA:3.40.1360.10 248 374 7.6E-43 T 13-10-2018 VEA_001623 8ac48cd115a663935009abfd64830269 588 PIRSF PIRSF002811 2 587 7.0E-146 T 13-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 VEA_001623 8ac48cd115a663935009abfd64830269 588 SUPERFAMILY SSF57783 4 101 4.76E-38 T 13-10-2018 VEA_001623 8ac48cd115a663935009abfd64830269 588 SMART SM00766 458 583 1.7E-57 T 13-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 VEA_001623 8ac48cd115a663935009abfd64830269 588 SUPERFAMILY SSF56731 123 434 7.32E-115 T 13-10-2018 VEA_001623 8ac48cd115a663935009abfd64830269 588 Pfam PF10410 DnaB-helicase binding domain of primase 376 428 8.3E-9 T 13-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 VEA_001623 8ac48cd115a663935009abfd64830269 588 TIGRFAM TIGR01391 dnaG: DNA primase 5 423 3.9E-148 T 13-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 VEA_001623 8ac48cd115a663935009abfd64830269 588 SMART SM00400 36 90 1.8E-37 T 13-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 VEA_001623 8ac48cd115a663935009abfd64830269 588 Pfam PF13155 Toprim-like 270 357 7.9E-14 T 13-10-2018 VEA_001623 8ac48cd115a663935009abfd64830269 588 Pfam PF08278 DNA primase DnaG DnaB-binding 459 582 8.0E-36 T 13-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 VEA_001623 8ac48cd115a663935009abfd64830269 588 Pfam PF08275 DNA primase catalytic core, N-terminal domain 133 257 7.0E-42 T 13-10-2018 IPR013264 DNA primase, catalytic core, N-terminal VEA_001623 8ac48cd115a663935009abfd64830269 588 Gene3D G3DSA:1.20.50.20 375 433 1.2E-22 T 13-10-2018 VEA_001623 8ac48cd115a663935009abfd64830269 588 Gene3D G3DSA:3.90.980.10 122 247 5.0E-46 T 13-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily VEA_001623 8ac48cd115a663935009abfd64830269 588 Pfam PF01807 CHC2 zinc finger 6 101 1.9E-41 T 13-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 VEA_001623 8ac48cd115a663935009abfd64830269 588 Gene3D G3DSA:1.10.860.10 446 588 5.7E-58 T 13-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal VEA_002270 9d681148ead5743a98230f5f95834937 228 SUPERFAMILY SSF56784 5 224 8.01E-61 T 13-10-2018 IPR036412 HAD-like superfamily VEA_002270 9d681148ead5743a98230f5f95834937 228 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 80 194 1.0E-10 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEA_002270 9d681148ead5743a98230f5f95834937 228 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 193 1.0E-40 T 13-10-2018 VEA_002270 9d681148ead5743a98230f5f95834937 228 Gene3D G3DSA:1.10.150.240 21 94 7.7E-66 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VEA_002270 9d681148ead5743a98230f5f95834937 228 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 88 193 9.0E-15 T 13-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 VEA_002270 9d681148ead5743a98230f5f95834937 228 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 98 189 1.3E-10 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEA_002270 9d681148ead5743a98230f5f95834937 228 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 6 225 35.623 T 13-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 VEA_002270 9d681148ead5743a98230f5f95834937 228 Gene3D G3DSA:3.40.50.1000 9 216 7.7E-66 T 13-10-2018 IPR023214 HAD superfamily VEA_002270 9d681148ead5743a98230f5f95834937 228 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 9 222 3.9E-61 T 13-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 VEA_001864 82aaf36395e34d8dacf86bbe953b7b72 706 SUPERFAMILY SSF81301 180 393 1.63E-59 T 13-10-2018 VEA_001864 82aaf36395e34d8dacf86bbe953b7b72 706 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 27 702 1.2E-270 T 13-10-2018 IPR004811 RelA/SpoT family GO:0015969 VEA_001864 82aaf36395e34d8dacf86bbe953b7b72 706 Gene3D G3DSA:1.10.3210.10 3 190 2.7E-80 T 13-10-2018 VEA_001864 82aaf36395e34d8dacf86bbe953b7b72 706 Gene3D G3DSA:3.30.460.10 193 325 2.1E-46 T 13-10-2018 VEA_001864 82aaf36395e34d8dacf86bbe953b7b72 706 SUPERFAMILY SSF109604 3 190 2.54E-75 T 13-10-2018 VEA_001864 82aaf36395e34d8dacf86bbe953b7b72 706 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 9.3E-35 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 VEA_001864 82aaf36395e34d8dacf86bbe953b7b72 706 Gene3D G3DSA:3.30.70.260 627 706 1.0E-12 T 13-10-2018 VEA_001864 82aaf36395e34d8dacf86bbe953b7b72 706 SUPERFAMILY SSF55021 631 703 7.91E-7 T 13-10-2018 VEA_001864 82aaf36395e34d8dacf86bbe953b7b72 706 SMART SM00471 41 153 4.3E-11 T 13-10-2018 IPR003607 HD/PDEase domain VEA_001864 82aaf36395e34d8dacf86bbe953b7b72 706 Gene3D G3DSA:3.10.20.30 382 456 4.6E-29 T 13-10-2018 IPR012675 Beta-grasp domain superfamily VEA_001864 82aaf36395e34d8dacf86bbe953b7b72 706 Pfam PF13291 ACT domain 627 703 2.3E-14 T 13-10-2018 IPR002912 ACT domain VEA_001864 82aaf36395e34d8dacf86bbe953b7b72 706 SUPERFAMILY SSF81271 376 448 1.85E-20 T 13-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VEA_001864 82aaf36395e34d8dacf86bbe953b7b72 706 SMART SM00954 235 345 6.9E-59 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 VEA_001864 82aaf36395e34d8dacf86bbe953b7b72 706 Pfam PF13328 HD domain 28 175 5.9E-54 T 13-10-2018 IPR003607 HD/PDEase domain VEA_001864 82aaf36395e34d8dacf86bbe953b7b72 706 Pfam PF02824 TGS domain 389 447 4.9E-19 T 13-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 VEA_004175 9e46e3b512d245501fe0abf0182c1701 308 SUPERFAMILY SSF52172 183 306 1.2E-25 T 13-10-2018 IPR011006 CheY-like superfamily VEA_004175 9e46e3b512d245501fe0abf0182c1701 308 SUPERFAMILY SSF50341 16 157 1.57E-35 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VEA_004175 9e46e3b512d245501fe0abf0182c1701 308 SMART SM00260 17 153 3.8E-25 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VEA_004175 9e46e3b512d245501fe0abf0182c1701 308 Gene3D G3DSA:2.30.30.40 23 147 2.9E-28 T 13-10-2018 VEA_004175 9e46e3b512d245501fe0abf0182c1701 308 Pfam PF00072 Response regulator receiver domain 184 302 1.4E-18 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_004175 9e46e3b512d245501fe0abf0182c1701 308 SMART SM00448 182 302 5.0E-19 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_004175 9e46e3b512d245501fe0abf0182c1701 308 PIRSF PIRSF002867 1 308 5.7E-103 T 13-10-2018 IPR024181 Chemotaxis response regulator CheV VEA_004175 9e46e3b512d245501fe0abf0182c1701 308 Gene3D G3DSA:3.40.50.2300 168 308 1.5E-25 T 13-10-2018 VEA_004175 9e46e3b512d245501fe0abf0182c1701 308 Gene3D G3DSA:2.40.50.180 39 153 2.9E-28 T 13-10-2018 VEA_004175 9e46e3b512d245501fe0abf0182c1701 308 Pfam PF01584 CheW-like domain 21 155 5.6E-34 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VEA_002306 0341329ffa6b4c2fb32c0a09ffe330fc 387 Gene3D G3DSA:3.40.640.10 3 248 3.5E-81 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_002306 0341329ffa6b4c2fb32c0a09ffe330fc 387 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 191 205 - T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VEA_002306 0341329ffa6b4c2fb32c0a09ffe330fc 387 Gene3D G3DSA:3.90.1150.10 249 387 8.0E-51 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEA_002306 0341329ffa6b4c2fb32c0a09ffe330fc 387 PIRSF PIRSF001434 1 385 2.0E-129 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VEA_002306 0341329ffa6b4c2fb32c0a09ffe330fc 387 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 4 383 7.6E-200 T 13-10-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 VEA_002306 0341329ffa6b4c2fb32c0a09ffe330fc 387 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 381 2.8E-134 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VEA_002306 0341329ffa6b4c2fb32c0a09ffe330fc 387 SUPERFAMILY SSF53383 9 383 9.54E-114 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_004478 e12ad8dd58d6b5154872f9eea3371abc 1077 SUPERFAMILY SSF52440 1 127 3.74E-50 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VEA_004478 e12ad8dd58d6b5154872f9eea3371abc 1077 SUPERFAMILY SSF56059 128 401 1.43E-108 T 13-10-2018 VEA_004478 e12ad8dd58d6b5154872f9eea3371abc 1077 Gene3D G3DSA:3.40.50.1380 937 1072 4.5E-33 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VEA_004478 e12ad8dd58d6b5154872f9eea3371abc 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 8.1E-64 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEA_004478 e12ad8dd58d6b5154872f9eea3371abc 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 8.1E-64 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEA_004478 e12ad8dd58d6b5154872f9eea3371abc 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 8.1E-64 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEA_004478 e12ad8dd58d6b5154872f9eea3371abc 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 8.1E-64 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEA_004478 e12ad8dd58d6b5154872f9eea3371abc 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 8.1E-64 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEA_004478 e12ad8dd58d6b5154872f9eea3371abc 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 8.1E-64 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEA_004478 e12ad8dd58d6b5154872f9eea3371abc 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 8.1E-64 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEA_004478 e12ad8dd58d6b5154872f9eea3371abc 1077 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.11 T 13-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEA_004478 e12ad8dd58d6b5154872f9eea3371abc 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VEA_004478 e12ad8dd58d6b5154872f9eea3371abc 1077 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.386 T 13-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEA_004478 e12ad8dd58d6b5154872f9eea3371abc 1077 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 1.1E-41 T 13-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEA_004478 e12ad8dd58d6b5154872f9eea3371abc 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 874 6.8E-38 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VEA_004478 e12ad8dd58d6b5154872f9eea3371abc 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 2.2E-72 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VEA_004478 e12ad8dd58d6b5154872f9eea3371abc 1077 SUPERFAMILY SSF48108 397 554 4.84E-52 T 13-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEA_004478 e12ad8dd58d6b5154872f9eea3371abc 1077 SMART SM00851 955 1041 1.3E-25 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain VEA_004478 e12ad8dd58d6b5154872f9eea3371abc 1077 Pfam PF02142 MGS-like domain 956 1041 8.5E-16 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain VEA_004478 e12ad8dd58d6b5154872f9eea3371abc 1077 SMART SM01096 424 547 1.6E-74 T 13-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEA_004478 e12ad8dd58d6b5154872f9eea3371abc 1077 Gene3D G3DSA:3.30.470.20 665 934 1.5E-124 T 13-10-2018 VEA_004478 e12ad8dd58d6b5154872f9eea3371abc 1077 Gene3D G3DSA:3.30.470.20 119 403 2.9E-129 T 13-10-2018 VEA_004478 e12ad8dd58d6b5154872f9eea3371abc 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VEA_004478 e12ad8dd58d6b5154872f9eea3371abc 1077 SUPERFAMILY SSF52335 937 1071 2.75E-34 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VEA_004478 e12ad8dd58d6b5154872f9eea3371abc 1077 SUPERFAMILY SSF52440 556 675 1.87E-49 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VEA_004478 e12ad8dd58d6b5154872f9eea3371abc 1077 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1050 0.0 T 13-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEA_004478 e12ad8dd58d6b5154872f9eea3371abc 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VEA_004478 e12ad8dd58d6b5154872f9eea3371abc 1077 Gene3D G3DSA:3.40.50.20 554 662 2.4E-49 T 13-10-2018 VEA_004478 e12ad8dd58d6b5154872f9eea3371abc 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VEA_004478 e12ad8dd58d6b5154872f9eea3371abc 1077 Gene3D G3DSA:3.40.50.20 1 116 2.2E-50 T 13-10-2018 VEA_004478 e12ad8dd58d6b5154872f9eea3371abc 1077 SUPERFAMILY SSF56059 673 932 1.41E-103 T 13-10-2018 VEA_004478 e12ad8dd58d6b5154872f9eea3371abc 1077 Gene3D G3DSA:1.10.1030.10 404 553 3.0E-53 T 13-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEA_003994 e845f018a94065617811309137cdba4e 1153 Gene3D G3DSA:3.40.50.300 542 781 2.6E-237 T 13-10-2018 VEA_003994 e845f018a94065617811309137cdba4e 1153 SUPERFAMILY SSF52540 782 990 9.05E-50 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003994 e845f018a94065617811309137cdba4e 1153 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 148 1081 0.0 T 13-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 VEA_003994 e845f018a94065617811309137cdba4e 1153 Gene3D G3DSA:3.40.50.11180 26 334 2.6E-122 T 13-10-2018 VEA_003994 e845f018a94065617811309137cdba4e 1153 Pfam PF00271 Helicase conserved C-terminal domain 807 909 9.5E-17 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_003994 e845f018a94065617811309137cdba4e 1153 SMART SM00490 826 910 5.4E-19 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_003994 e845f018a94065617811309137cdba4e 1153 SMART SM00487 600 790 1.9E-33 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEA_003994 e845f018a94065617811309137cdba4e 1153 Gene3D G3DSA:3.40.50.11140 356 453 2.0E-30 T 13-10-2018 VEA_003994 e845f018a94065617811309137cdba4e 1153 Pfam PF02559 CarD-like/TRCF domain 480 575 3.0E-26 T 13-10-2018 IPR003711 CarD-like/TRCF domain VEA_003994 e845f018a94065617811309137cdba4e 1153 Gene3D G3DSA:3.30.2060.10 130 215 2.6E-122 T 13-10-2018 VEA_003994 e845f018a94065617811309137cdba4e 1153 SMART SM01058 479 576 8.6E-53 T 13-10-2018 IPR003711 CarD-like/TRCF domain VEA_003994 e845f018a94065617811309137cdba4e 1153 SUPERFAMILY SSF52540 523 783 4.58E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003994 e845f018a94065617811309137cdba4e 1153 Gene3D G3DSA:2.30.30.840 483 541 2.6E-237 T 13-10-2018 VEA_003994 e845f018a94065617811309137cdba4e 1153 Pfam PF03461 TRCF domain 1010 1101 7.3E-28 T 13-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 VEA_003994 e845f018a94065617811309137cdba4e 1153 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 30 1108 28.06 T 13-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 VEA_003994 e845f018a94065617811309137cdba4e 1153 SMART SM00982 1008 1108 1.5E-47 T 13-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 VEA_003994 e845f018a94065617811309137cdba4e 1153 SUPERFAMILY SSF143517 994 1147 2.09E-43 T 13-10-2018 IPR037235 TRCF-like, C-terminal domain VEA_003994 e845f018a94065617811309137cdba4e 1153 Pfam PF00270 DEAD/DEAH box helicase 605 765 1.1E-20 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VEA_003994 e845f018a94065617811309137cdba4e 1153 SUPERFAMILY SSF52540 11 342 4.45E-103 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003994 e845f018a94065617811309137cdba4e 1153 SUPERFAMILY SSF52540 351 466 8.23E-27 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003994 e845f018a94065617811309137cdba4e 1153 Gene3D G3DSA:3.40.50.300 478 990 2.6E-237 T 13-10-2018 VEA_003994 e845f018a94065617811309137cdba4e 1153 SUPERFAMILY SSF141259 470 548 8.11E-25 T 13-10-2018 IPR036101 CarD-like/TRCF domain superfamily VEA_003994 e845f018a94065617811309137cdba4e 1153 Gene3D G3DSA:3.90.1150.50 1004 1150 8.3E-45 T 13-10-2018 IPR037235 TRCF-like, C-terminal domain VEA_000154 bab44da5e869b03e6210462b21daeee2 329 Pfam PF07478 D-ala D-ala ligase C-terminus 125 325 4.1E-54 T 13-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VEA_000154 bab44da5e869b03e6210462b21daeee2 329 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 82 93 - T 13-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VEA_000154 bab44da5e869b03e6210462b21daeee2 329 PIRSF PIRSF039102 1 329 1.6E-77 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VEA_000154 bab44da5e869b03e6210462b21daeee2 329 SUPERFAMILY SSF52440 3 114 4.6E-27 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VEA_000154 bab44da5e869b03e6210462b21daeee2 329 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 329 33.047 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VEA_000154 bab44da5e869b03e6210462b21daeee2 329 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 328 6.2E-100 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VEA_000154 bab44da5e869b03e6210462b21daeee2 329 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 271 299 - T 13-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VEA_000154 bab44da5e869b03e6210462b21daeee2 329 SUPERFAMILY SSF56059 115 326 4.91E-44 T 13-10-2018 VEA_000154 bab44da5e869b03e6210462b21daeee2 329 Gene3D G3DSA:3.30.1490.20 131 198 1.5E-80 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VEA_000154 bab44da5e869b03e6210462b21daeee2 329 Gene3D G3DSA:3.40.50.20 18 325 1.5E-80 T 13-10-2018 VEA_000154 bab44da5e869b03e6210462b21daeee2 329 Gene3D G3DSA:3.30.470.20 104 319 1.5E-80 T 13-10-2018 VEA_000154 bab44da5e869b03e6210462b21daeee2 329 Pfam PF01820 D-ala D-ala ligase N-terminus 4 105 5.4E-20 T 13-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VEA_002724 d7de696dbd81e65c8d97b8363e7ead33 222 Pfam PF04391 Protein of unknown function (DUF533) 43 220 2.9E-62 T 13-10-2018 IPR007486 Inner membrane protein YebE VEA_002724 d7de696dbd81e65c8d97b8363e7ead33 222 Gene3D G3DSA:1.10.3680.10 99 222 5.1E-12 T 13-10-2018 IPR029024 TerB-like VEA_002724 d7de696dbd81e65c8d97b8363e7ead33 222 SUPERFAMILY SSF158682 81 221 1.31E-28 T 13-10-2018 IPR029024 TerB-like VEA_001308 c0c4f4b006e0bbd6b504e7e24f553d31 100 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 94 1.9E-17 T 13-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VEA_001308 c0c4f4b006e0bbd6b504e7e24f553d31 100 SUPERFAMILY SSF52794 2 94 1.71E-33 T 13-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VEA_001308 c0c4f4b006e0bbd6b504e7e24f553d31 100 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 4 86 1.6E-31 T 13-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 VEA_001308 c0c4f4b006e0bbd6b504e7e24f553d31 100 Gene3D G3DSA:3.40.50.2300 1 99 1.0E-37 T 13-10-2018 VEA_002146 cc09259b0c29db0e7c8190aca16b0815 284 Gene3D G3DSA:1.10.357.140 19 167 1.1E-43 T 13-10-2018 VEA_002146 cc09259b0c29db0e7c8190aca16b0815 284 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 8 283 6.5E-107 T 13-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 VEA_002146 cc09259b0c29db0e7c8190aca16b0815 284 Pfam PF01040 UbiA prenyltransferase family 24 266 3.2E-70 T 13-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 VEA_002146 cc09259b0c29db0e7c8190aca16b0815 284 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 1 284 29.727 T 13-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 VEA_002146 cc09259b0c29db0e7c8190aca16b0815 284 Gene3D G3DSA:1.20.120.1780 168 284 2.0E-13 T 13-10-2018 VEA_002964 9ef65f919b09c7a410d8ab5646f5fe95 315 Pfam PF13410 Glutathione S-transferase, C-terminal domain 192 263 5.4E-13 T 13-10-2018 VEA_002964 9ef65f919b09c7a410d8ab5646f5fe95 315 SUPERFAMILY SSF52833 31 150 4.48E-17 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VEA_002964 9ef65f919b09c7a410d8ab5646f5fe95 315 Gene3D G3DSA:1.20.1050.10 169 315 1.8E-69 T 13-10-2018 VEA_002964 9ef65f919b09c7a410d8ab5646f5fe95 315 PIRSF PIRSF015753 5 312 7.4E-136 T 13-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 VEA_002964 9ef65f919b09c7a410d8ab5646f5fe95 315 SUPERFAMILY SSF47616 166 312 2.78E-36 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VEA_002964 9ef65f919b09c7a410d8ab5646f5fe95 315 Pfam PF13409 Glutathione S-transferase, N-terminal domain 56 146 1.9E-22 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VEA_002964 9ef65f919b09c7a410d8ab5646f5fe95 315 Gene3D G3DSA:3.40.30.130 1 168 1.0E-66 T 13-10-2018 VEA_001385 7aadb0982140f129e489990274c8ccf7 380 Gene3D G3DSA:1.10.287.470 96 169 1.6E-95 T 13-10-2018 VEA_001385 7aadb0982140f129e489990274c8ccf7 380 Gene3D G3DSA:2.40.50.100 61 205 1.6E-95 T 13-10-2018 VEA_001385 7aadb0982140f129e489990274c8ccf7 380 Pfam PF13533 Biotin-lipoyl like 63 110 4.3E-14 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VEA_001385 7aadb0982140f129e489990274c8ccf7 380 Gene3D G3DSA:2.40.420.20 302 370 1.6E-95 T 13-10-2018 VEA_001385 7aadb0982140f129e489990274c8ccf7 380 Gene3D G3DSA:2.40.30.170 49 300 1.6E-95 T 13-10-2018 VEA_001385 7aadb0982140f129e489990274c8ccf7 380 SUPERFAMILY SSF111369 50 295 1.31E-59 T 13-10-2018 VEA_001385 7aadb0982140f129e489990274c8ccf7 380 Pfam PF13437 HlyD family secretion protein 173 287 8.6E-8 T 13-10-2018 VEA_001385 7aadb0982140f129e489990274c8ccf7 380 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 37 371 1.0E-84 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VEA_002383 c1eeeb1e2108cd5162040211ced02813 347 Gene3D G3DSA:3.30.420.40 14 331 5.4E-131 T 13-10-2018 VEA_002383 c1eeeb1e2108cd5162040211ced02813 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 1.4E-165 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VEA_002383 c1eeeb1e2108cd5162040211ced02813 347 Gene3D G3DSA:3.90.640.10 190 263 5.4E-131 T 13-10-2018 VEA_002383 c1eeeb1e2108cd5162040211ced02813 347 SUPERFAMILY SSF53067 154 340 5.11E-50 T 13-10-2018 VEA_002383 c1eeeb1e2108cd5162040211ced02813 347 SUPERFAMILY SSF53067 9 152 2.35E-37 T 13-10-2018 VEA_002383 c1eeeb1e2108cd5162040211ced02813 347 Pfam PF06723 MreB/Mbl protein 11 338 1.8E-148 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VEA_002383 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 2.5E-63 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VEA_002383 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 2.5E-63 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VEA_002383 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 2.5E-63 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VEA_002383 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 2.5E-63 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VEA_002383 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 2.5E-63 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VEA_002383 c1eeeb1e2108cd5162040211ced02813 347 Gene3D G3DSA:3.30.420.40 158 321 5.4E-131 T 13-10-2018 VEA_001650 eb3171dabcef787e69f883d8dfe39562 602 Gene3D G3DSA:3.40.50.12780 1 323 2.6E-54 T 13-10-2018 VEA_001650 eb3171dabcef787e69f883d8dfe39562 602 Pfam PF00501 AMP-binding enzyme 14 466 1.9E-100 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VEA_001650 eb3171dabcef787e69f883d8dfe39562 602 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 13-10-2018 IPR020845 AMP-binding, conserved site VEA_001650 eb3171dabcef787e69f883d8dfe39562 602 Gene3D G3DSA:3.40.50.12780 324 459 6.7E-31 T 13-10-2018 VEA_001650 eb3171dabcef787e69f883d8dfe39562 602 SUPERFAMILY SSF56801 7 596 1.19E-114 T 13-10-2018 VEA_000951 031616ccd361fa7111656a78df830fe2 131 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 38 114 4.9E-9 T 13-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 VEA_000951 031616ccd361fa7111656a78df830fe2 131 SUPERFAMILY SSF51316 13 130 1.78E-30 T 13-10-2018 IPR011057 Mss4-like superfamily VEA_000951 031616ccd361fa7111656a78df830fe2 131 Gene3D G3DSA:2.170.150.70 15 131 4.2E-37 T 13-10-2018 VEA_002704 48a479d65dc9f98038208e1b4eb2aed3 189 Pfam PF03923 Uncharacterized lipoprotein 28 186 9.9E-53 T 13-10-2018 IPR005619 Uncharacterised protein family, YajG VEA_002577 14e5935cc395deed36abff6a74a516ef 470 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 417 466 7.5E-10 T 13-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_002577 14e5935cc395deed36abff6a74a516ef 470 Gene3D G3DSA:3.40.120.10 171 365 1.3E-60 T 13-10-2018 VEA_002577 14e5935cc395deed36abff6a74a516ef 470 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 2 137 9.2E-37 T 13-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_002577 14e5935cc395deed36abff6a74a516ef 470 Gene3D G3DSA:3.30.310.50 369 469 4.3E-16 T 13-10-2018 VEA_002577 14e5935cc395deed36abff6a74a516ef 470 SUPERFAMILY SSF53738 2 187 2.35E-39 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_002577 14e5935cc395deed36abff6a74a516ef 470 SUPERFAMILY SSF53738 250 379 2.0E-30 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_002577 14e5935cc395deed36abff6a74a516ef 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 2.1E-11 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_002577 14e5935cc395deed36abff6a74a516ef 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 214 227 2.1E-11 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_002577 14e5935cc395deed36abff6a74a516ef 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 242 257 2.1E-11 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_002577 14e5935cc395deed36abff6a74a516ef 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 180 199 2.1E-11 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_002577 14e5935cc395deed36abff6a74a516ef 470 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 267 378 5.3E-26 T 13-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_002577 14e5935cc395deed36abff6a74a516ef 470 Gene3D G3DSA:3.40.120.10 263 368 1.3E-60 T 13-10-2018 VEA_002577 14e5935cc395deed36abff6a74a516ef 470 Gene3D G3DSA:3.40.120.10 1 170 2.8E-47 T 13-10-2018 VEA_002577 14e5935cc395deed36abff6a74a516ef 470 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 162 262 1.7E-24 T 13-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_002577 14e5935cc395deed36abff6a74a516ef 470 SUPERFAMILY SSF55957 374 466 4.45E-18 T 13-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_002137 0e2459aaa44347c31414cc19d65311be 199 Pfam PF03602 Conserved hypothetical protein 95 19 195 6.0E-63 T 13-10-2018 VEA_002137 0e2459aaa44347c31414cc19d65311be 199 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 131 137 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VEA_002137 0e2459aaa44347c31414cc19d65311be 199 Gene3D G3DSA:3.40.50.150 6 199 7.9E-65 T 13-10-2018 VEA_002137 0e2459aaa44347c31414cc19d65311be 199 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 17 196 1.9E-60 T 13-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 VEA_002137 0e2459aaa44347c31414cc19d65311be 199 SUPERFAMILY SSF53335 19 196 3.49E-56 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_002137 0e2459aaa44347c31414cc19d65311be 199 PIRSF PIRSF004553 18 198 2.2E-57 T 13-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 VEA_001743 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.3E-18 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001743 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.3E-18 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001743 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.3E-18 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001743 b67c847ad62a5c40d2c05037ccb34615 103 SUPERFAMILY SSF54999 5 101 7.06E-37 T 13-10-2018 IPR036838 Ribosomal protein S10 domain superfamily VEA_001743 b67c847ad62a5c40d2c05037ccb34615 103 Gene3D G3DSA:3.30.70.600 1 103 2.2E-38 T 13-10-2018 IPR036838 Ribosomal protein S10 domain superfamily VEA_001743 b67c847ad62a5c40d2c05037ccb34615 103 SMART SM01403 7 101 6.6E-56 T 13-10-2018 IPR027486 Ribosomal protein S10 domain VEA_001743 b67c847ad62a5c40d2c05037ccb34615 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 13-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001743 b67c847ad62a5c40d2c05037ccb34615 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.8E-35 T 13-10-2018 IPR027486 Ribosomal protein S10 domain VEA_001743 b67c847ad62a5c40d2c05037ccb34615 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.839 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001743 b67c847ad62a5c40d2c05037ccb34615 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.1E-45 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_002705 9d3f72e771f212f3920936cc2c2058dd 384 Gene3D G3DSA:3.40.50.150 8 181 3.2E-51 T 13-10-2018 VEA_002705 9d3f72e771f212f3920936cc2c2058dd 384 SUPERFAMILY SSF53335 192 370 5.96E-27 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_002705 9d3f72e771f212f3920936cc2c2058dd 384 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 2 376 48.952 T 13-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 VEA_002705 9d3f72e771f212f3920936cc2c2058dd 384 Pfam PF08468 Methyltransferase small domain N-terminal 47 167 2.7E-5 T 13-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 VEA_002705 9d3f72e771f212f3920936cc2c2058dd 384 PIRSF PIRSF037565 1 377 7.1E-172 T 13-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 VEA_002705 9d3f72e771f212f3920936cc2c2058dd 384 Pfam PF05175 Methyltransferase small domain 200 373 1.4E-54 T 13-10-2018 IPR007848 Methyltransferase small domain GO:0008168 VEA_002705 9d3f72e771f212f3920936cc2c2058dd 384 Gene3D G3DSA:3.40.50.150 187 380 1.0E-46 T 13-10-2018 VEA_001549 6c4d2cfebc6152cbfedf137e08eb551b 379 Pfam PF16113 Enoyl-CoA hydratase/isomerase 19 358 7.5E-105 T 13-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 VEA_001549 6c4d2cfebc6152cbfedf137e08eb551b 379 SUPERFAMILY SSF52096 18 344 9.12E-54 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEA_001549 6c4d2cfebc6152cbfedf137e08eb551b 379 Gene3D G3DSA:3.90.226.10 5 375 6.8E-113 T 13-10-2018 VEA_003672 b449fccabc32be0040bdea58c22f08e4 405 Pfam PF01266 FAD dependent oxidoreductase 1 385 9.5E-51 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VEA_003672 b449fccabc32be0040bdea58c22f08e4 405 Gene3D G3DSA:3.50.50.60 104 388 1.4E-32 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_003672 b449fccabc32be0040bdea58c22f08e4 405 Gene3D G3DSA:3.50.50.60 1 64 7.9E-11 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_003672 b449fccabc32be0040bdea58c22f08e4 405 Gene3D G3DSA:3.30.9.10 129 347 1.4E-32 T 13-10-2018 VEA_003672 b449fccabc32be0040bdea58c22f08e4 405 SUPERFAMILY SSF51905 1 404 4.66E-37 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_003672 b449fccabc32be0040bdea58c22f08e4 405 SUPERFAMILY SSF54373 260 347 2.22E-9 T 13-10-2018 VEA_000843 1b56b6e463b6b013337835be28b357bd 390 SUPERFAMILY SSF48452 244 369 5.96E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_000843 1b56b6e463b6b013337835be28b357bd 390 Gene3D G3DSA:1.25.40.10 18 128 2.0E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_000843 1b56b6e463b6b013337835be28b357bd 390 SUPERFAMILY SSF48452 93 229 1.94E-10 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_000843 1b56b6e463b6b013337835be28b357bd 390 Gene3D G3DSA:1.25.40.10 276 389 6.9E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_000843 1b56b6e463b6b013337835be28b357bd 390 Gene3D G3DSA:1.25.40.10 129 275 9.3E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_001745 a78608ef45e867bc0a8ef18e51dc2ac7 733 SMART SM00487 196 395 1.7E-16 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEA_001745 a78608ef45e867bc0a8ef18e51dc2ac7 733 TIGRFAM TIGR00595 priA: primosomal protein N' 221 729 7.1E-193 T 13-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 VEA_001745 a78608ef45e867bc0a8ef18e51dc2ac7 733 Pfam PF00270 DEAD/DEAH box helicase 219 364 1.4E-14 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VEA_001745 a78608ef45e867bc0a8ef18e51dc2ac7 733 Gene3D G3DSA:3.40.50.300 185 379 2.6E-77 T 13-10-2018 VEA_001745 a78608ef45e867bc0a8ef18e51dc2ac7 733 SUPERFAMILY SSF52540 71 379 7.98E-41 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001745 a78608ef45e867bc0a8ef18e51dc2ac7 733 SMART SM00490 492 589 3.9E-13 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_001745 a78608ef45e867bc0a8ef18e51dc2ac7 733 Gene3D G3DSA:1.10.8.630 4 113 4.4E-35 T 13-10-2018 VEA_001745 a78608ef45e867bc0a8ef18e51dc2ac7 733 SUPERFAMILY SSF52540 460 631 7.98E-30 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001745 a78608ef45e867bc0a8ef18e51dc2ac7 733 Pfam PF00271 Helicase conserved C-terminal domain 499 588 1.8E-8 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_001745 a78608ef45e867bc0a8ef18e51dc2ac7 733 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 732 25.351 T 13-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 VEA_002506 62addd22da6dbd689232a3094b50dd75 546 Pfam PF00117 Glutamine amidotransferase class-I 301 535 3.0E-62 T 13-10-2018 IPR017926 Glutamine amidotransferase VEA_002506 62addd22da6dbd689232a3094b50dd75 546 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.176 T 13-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 VEA_002506 62addd22da6dbd689232a3094b50dd75 546 Pfam PF06418 CTP synthase N-terminus 5 265 1.3E-124 T 13-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 VEA_002506 62addd22da6dbd689232a3094b50dd75 546 SUPERFAMILY SSF52540 3 269 3.64E-121 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002506 62addd22da6dbd689232a3094b50dd75 546 SUPERFAMILY SSF52317 289 538 3.25E-88 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VEA_002506 62addd22da6dbd689232a3094b50dd75 546 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 4.4E-260 T 13-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 VEA_002506 62addd22da6dbd689232a3094b50dd75 546 Gene3D G3DSA:3.40.50.300 1 285 3.6E-133 T 13-10-2018 VEA_002506 62addd22da6dbd689232a3094b50dd75 546 Gene3D G3DSA:3.40.50.880 286 543 2.5E-106 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VEA_003898 4028918f0008e0fb24293467ed6c2d36 202 Gene3D G3DSA:3.40.50.1390 5 147 2.3E-33 T 13-10-2018 VEA_003898 4028918f0008e0fb24293467ed6c2d36 202 ProSitePatterns PS00397 Site-specific recombinases active site. 8 16 - T 13-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 VEA_003898 4028918f0008e0fb24293467ed6c2d36 202 ProSitePatterns PS00398 Site-specific recombinases signature 2. 65 77 - T 13-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 VEA_003898 4028918f0008e0fb24293467ed6c2d36 202 Pfam PF02796 Helix-turn-helix domain of resolvase 149 188 2.9E-8 T 13-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 VEA_003898 4028918f0008e0fb24293467ed6c2d36 202 SMART SM00857 5 147 2.0E-42 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VEA_003898 4028918f0008e0fb24293467ed6c2d36 202 Pfam PF00239 Resolvase, N terminal domain 6 146 1.8E-34 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VEA_003898 4028918f0008e0fb24293467ed6c2d36 202 Gene3D G3DSA:1.10.10.60 148 190 3.1E-6 T 13-10-2018 VEA_003898 4028918f0008e0fb24293467ed6c2d36 202 SUPERFAMILY SSF53041 4 146 1.7E-35 T 13-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 VEA_001506 bd2ddb49ba4016f3deae07863feae219 430 SUPERFAMILY SSF52540 75 356 2.35E-74 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001506 bd2ddb49ba4016f3deae07863feae219 430 Pfam PF00271 Helicase conserved C-terminal domain 231 339 1.7E-29 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_001506 bd2ddb49ba4016f3deae07863feae219 430 Gene3D G3DSA:3.40.50.300 220 422 7.6E-49 T 13-10-2018 VEA_001506 bd2ddb49ba4016f3deae07863feae219 430 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VEA_001506 bd2ddb49ba4016f3deae07863feae219 430 Pfam PF00270 DEAD/DEAH box helicase 25 193 2.1E-51 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VEA_001506 bd2ddb49ba4016f3deae07863feae219 430 SMART SM00490 258 339 3.6E-31 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_001506 bd2ddb49ba4016f3deae07863feae219 430 SMART SM00487 20 229 1.3E-56 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEA_001506 bd2ddb49ba4016f3deae07863feae219 430 Gene3D G3DSA:3.40.50.300 1 219 3.6E-75 T 13-10-2018 VEA_000797 2796951d2a7ff4141cee62da0545d8b4 337 SMART SM00267 167 337 3.3E-53 T 13-10-2018 IPR000160 GGDEF domain VEA_000797 2796951d2a7ff4141cee62da0545d8b4 337 SUPERFAMILY SSF55073 183 335 1.02E-44 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_000797 2796951d2a7ff4141cee62da0545d8b4 337 Gene3D G3DSA:3.30.70.270 164 336 4.6E-52 T 13-10-2018 VEA_000797 2796951d2a7ff4141cee62da0545d8b4 337 Pfam PF00990 Diguanylate cyclase, GGDEF domain 178 333 1.0E-42 T 13-10-2018 IPR000160 GGDEF domain VEA_000797 2796951d2a7ff4141cee62da0545d8b4 337 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 175 334 4.7E-43 T 13-10-2018 IPR000160 GGDEF domain VEA_004358 68427486f3f674eb902df3128cbe1f2b 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 5.7E-58 T 13-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 VEA_004358 68427486f3f674eb902df3128cbe1f2b 107 Gene3D G3DSA:2.60.300.12 2 107 9.3E-39 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VEA_004358 68427486f3f674eb902df3128cbe1f2b 107 SUPERFAMILY SSF89360 1 96 8.11E-35 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VEA_004358 68427486f3f674eb902df3128cbe1f2b 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 13-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 VEA_004358 68427486f3f674eb902df3128cbe1f2b 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 2.0E-26 T 13-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 VEA_004358 68427486f3f674eb902df3128cbe1f2b 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 4.4E-38 T 13-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 VEA_000229 fa496fbf77ed5e32096156aacc0965fd 242 SUPERFAMILY SSF46689 9 86 2.98E-16 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_000229 fa496fbf77ed5e32096156aacc0965fd 242 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 2.1E-7 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEA_000229 fa496fbf77ed5e32096156aacc0965fd 242 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 2.1E-7 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEA_000229 fa496fbf77ed5e32096156aacc0965fd 242 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 1.6E-11 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEA_000229 fa496fbf77ed5e32096156aacc0965fd 242 Gene3D G3DSA:1.10.357.10 1 207 3.1E-25 T 13-10-2018 VEA_004514 383a5e80fc91f35cbbfb53f528598c03 455 Gene3D G3DSA:2.30.42.10 265 361 7.0E-28 T 13-10-2018 VEA_004514 383a5e80fc91f35cbbfb53f528598c03 455 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 377 443 1.7E-9 T 13-10-2018 IPR001478 PDZ domain GO:0005515 VEA_004514 383a5e80fc91f35cbbfb53f528598c03 455 Pfam PF13365 Trypsin-like peptidase domain 92 228 1.5E-31 T 13-10-2018 VEA_004514 383a5e80fc91f35cbbfb53f528598c03 455 SUPERFAMILY SSF50156 225 350 8.41E-27 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 VEA_004514 383a5e80fc91f35cbbfb53f528598c03 455 Gene3D G3DSA:2.40.10.120 37 261 2.8E-85 T 13-10-2018 VEA_004514 383a5e80fc91f35cbbfb53f528598c03 455 Gene3D G3DSA:2.30.42.10 362 455 1.1E-28 T 13-10-2018 VEA_004514 383a5e80fc91f35cbbfb53f528598c03 455 Pfam PF13180 PDZ domain 268 358 1.4E-17 T 13-10-2018 IPR001478 PDZ domain GO:0005515 VEA_004514 383a5e80fc91f35cbbfb53f528598c03 455 SUPERFAMILY SSF50156 379 454 1.97E-15 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 VEA_004514 383a5e80fc91f35cbbfb53f528598c03 455 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 1.5E-56 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VEA_004514 383a5e80fc91f35cbbfb53f528598c03 455 PRINTS PR00834 HtrA/DegQ protease family signature 123 143 1.5E-56 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VEA_004514 383a5e80fc91f35cbbfb53f528598c03 455 PRINTS PR00834 HtrA/DegQ protease family signature 307 319 1.5E-56 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VEA_004514 383a5e80fc91f35cbbfb53f528598c03 455 PRINTS PR00834 HtrA/DegQ protease family signature 164 188 1.5E-56 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VEA_004514 383a5e80fc91f35cbbfb53f528598c03 455 PRINTS PR00834 HtrA/DegQ protease family signature 199 216 1.5E-56 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VEA_004514 383a5e80fc91f35cbbfb53f528598c03 455 PRINTS PR00834 HtrA/DegQ protease family signature 102 114 1.5E-56 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VEA_004514 383a5e80fc91f35cbbfb53f528598c03 455 SUPERFAMILY SSF50494 37 258 1.43E-64 T 13-10-2018 IPR009003 Peptidase S1, PA clan VEA_004514 383a5e80fc91f35cbbfb53f528598c03 455 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 39 453 1.3E-163 T 13-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 VEA_004514 383a5e80fc91f35cbbfb53f528598c03 455 SMART SM00228 267 349 4.9E-17 T 13-10-2018 IPR001478 PDZ domain GO:0005515 VEA_004514 383a5e80fc91f35cbbfb53f528598c03 455 SMART SM00228 374 447 8.4E-10 T 13-10-2018 IPR001478 PDZ domain GO:0005515 VEA_002095 0cf6eb8ba3bafb4b5a908a1076a1b99f 439 Pfam PF02541 Ppx/GppA phosphatase family 1 245 1.8E-76 T 13-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 VEA_002095 0cf6eb8ba3bafb4b5a908a1076a1b99f 439 Gene3D G3DSA:3.30.420.40 1 241 1.4E-62 T 13-10-2018 VEA_002095 0cf6eb8ba3bafb4b5a908a1076a1b99f 439 SUPERFAMILY SSF109604 251 437 3.69E-43 T 13-10-2018 VEA_002095 0cf6eb8ba3bafb4b5a908a1076a1b99f 439 Gene3D G3DSA:1.10.3210.10 248 439 8.0E-48 T 13-10-2018 VEA_002095 0cf6eb8ba3bafb4b5a908a1076a1b99f 439 SUPERFAMILY SSF53067 1 71 2.4E-16 T 13-10-2018 VEA_002095 0cf6eb8ba3bafb4b5a908a1076a1b99f 439 Gene3D G3DSA:3.30.420.150 56 233 1.4E-62 T 13-10-2018 VEA_002095 0cf6eb8ba3bafb4b5a908a1076a1b99f 439 SUPERFAMILY SSF53067 76 246 5.92E-42 T 13-10-2018 VEA_001204 9879d659f8375a561d6e991266aebc73 231 Gene3D G3DSA:2.60.40.2130 31 175 7.4E-13 T 13-10-2018 IPR038678 Spondin, N-terminal domain superfamily Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 VEA_001204 9879d659f8375a561d6e991266aebc73 231 Pfam PF06468 Spondin_N 45 164 1.4E-10 T 13-10-2018 IPR009465 Spondin, N-terminal Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 VEA_004484 26e94d06ae33c43a30f7bd257da6e833 152 Pfam PF05258 Protein of unknown function (DUF721) 11 85 4.7E-13 T 13-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 VEA_002467 1ca178101fb0640c53393799a4e57026 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 13-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VEA_002467 1ca178101fb0640c53393799a4e57026 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 1.8E-45 T 13-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VEA_002467 1ca178101fb0640c53393799a4e57026 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 13-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VEA_002467 1ca178101fb0640c53393799a4e57026 384 Gene3D G3DSA:3.30.300.10 11 270 1.1E-179 T 13-10-2018 VEA_002467 1ca178101fb0640c53393799a4e57026 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 379 2.8E-197 T 13-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VEA_002467 1ca178101fb0640c53393799a4e57026 384 PIRSF PIRSF000497 1 381 1.1E-174 T 13-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VEA_002467 1ca178101fb0640c53393799a4e57026 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 3.7E-43 T 13-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VEA_002467 1ca178101fb0640c53393799a4e57026 384 Gene3D G3DSA:3.30.300.10 5 233 1.1E-179 T 13-10-2018 VEA_002467 1ca178101fb0640c53393799a4e57026 384 SUPERFAMILY SSF55973 233 382 1.45E-70 T 13-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VEA_002467 1ca178101fb0640c53393799a4e57026 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 59.024 T 13-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VEA_002467 1ca178101fb0640c53393799a4e57026 384 Gene3D G3DSA:3.30.300.10 103 372 1.1E-179 T 13-10-2018 VEA_002467 1ca178101fb0640c53393799a4e57026 384 SUPERFAMILY SSF55973 111 232 2.12E-51 T 13-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VEA_002467 1ca178101fb0640c53393799a4e57026 384 SUPERFAMILY SSF55973 3 109 1.61E-47 T 13-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VEA_002467 1ca178101fb0640c53393799a4e57026 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 369 6.1E-69 T 13-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VEA_001850 c2c22cc0c95118612d28ba21298899b5 279 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_001850 c2c22cc0c95118612d28ba21298899b5 279 SMART SM00382 40 232 3.0E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_001850 c2c22cc0c95118612d28ba21298899b5 279 Gene3D G3DSA:3.40.50.300 3 279 6.6E-89 T 13-10-2018 VEA_001850 c2c22cc0c95118612d28ba21298899b5 279 SUPERFAMILY SSF52540 6 254 4.14E-73 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001850 c2c22cc0c95118612d28ba21298899b5 279 Pfam PF00005 ABC transporter 32 181 5.4E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_003561 4b09965abf8e2bb6845e6377c8407725 228 SUPERFAMILY SSF48150 39 184 1.3E-40 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 VEA_003561 4b09965abf8e2bb6845e6377c8407725 228 Pfam PF03352 Methyladenine glycosylase 42 136 1.2E-16 T 13-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 VEA_003561 4b09965abf8e2bb6845e6377c8407725 228 Gene3D G3DSA:1.10.340.30 37 158 1.6E-19 T 13-10-2018 VEA_000904 8373edf720f79a3a79d56b1ea7100682 216 SUPERFAMILY SSF141571 6 50 6.28E-9 T 13-10-2018 VEA_000904 8373edf720f79a3a79d56b1ea7100682 216 SUPERFAMILY SSF141571 53 215 2.85E-36 T 13-10-2018 VEA_000904 8373edf720f79a3a79d56b1ea7100682 216 Pfam PF00805 Pentapeptide repeats (8 copies) 54 74 0.0092 T 13-10-2018 IPR001646 Pentapeptide repeat VEA_000904 8373edf720f79a3a79d56b1ea7100682 216 Pfam PF00805 Pentapeptide repeats (8 copies) 17 48 4.7E-6 T 13-10-2018 IPR001646 Pentapeptide repeat VEA_000904 8373edf720f79a3a79d56b1ea7100682 216 Pfam PF00805 Pentapeptide repeats (8 copies) 79 105 5.2E-5 T 13-10-2018 IPR001646 Pentapeptide repeat VEA_000904 8373edf720f79a3a79d56b1ea7100682 216 Gene3D G3DSA:2.160.20.80 3 216 6.6E-57 T 13-10-2018 VEA_000904 8373edf720f79a3a79d56b1ea7100682 216 Pfam PF13599 Pentapeptide repeats (9 copies) 113 166 3.5E-9 T 13-10-2018 IPR001646 Pentapeptide repeat VEA_002136 1b6b48ab0b7ad075b084f1e581971a54 88 Pfam PF06611 Protein of unknown function (DUF1145) 4 59 3.3E-19 T 13-10-2018 IPR009525 Protein of unknown function DUF1145 VEA_002491 41e0214240300651742c6f06340344fd 192 SUPERFAMILY SSF88946 2 107 2.04E-32 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VEA_002491 41e0214240300651742c6f06340344fd 192 Pfam PF08281 Sigma-70, region 4 134 181 4.2E-18 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VEA_002491 41e0214240300651742c6f06340344fd 192 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 47 78 - T 13-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VEA_002491 41e0214240300651742c6f06340344fd 192 Gene3D G3DSA:1.10.10.10 122 192 2.4E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_002491 41e0214240300651742c6f06340344fd 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 185 9.7E-33 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VEA_002491 41e0214240300651742c6f06340344fd 192 Pfam PF04542 Sigma-70 region 2 25 92 3.3E-18 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VEA_002491 41e0214240300651742c6f06340344fd 192 SUPERFAMILY SSF88659 124 184 1.63E-17 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VEA_002491 41e0214240300651742c6f06340344fd 192 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 2 190 1.5E-103 T 13-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VEA_002491 41e0214240300651742c6f06340344fd 192 Gene3D G3DSA:1.10.1740.10 1 121 1.4E-45 T 13-10-2018 VEA_001862 95751c4a2eb27c09b26b5342c2db8ca8 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 38.143 T 13-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 VEA_001862 95751c4a2eb27c09b26b5342c2db8ca8 207 Gene3D G3DSA:3.40.50.300 8 183 1.7E-74 T 13-10-2018 VEA_001862 95751c4a2eb27c09b26b5342c2db8ca8 207 Gene3D G3DSA:3.30.63.10 37 96 1.7E-74 T 13-10-2018 VEA_001862 95751c4a2eb27c09b26b5342c2db8ca8 207 SMART SM00072 3 187 2.5E-77 T 13-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit VEA_001862 95751c4a2eb27c09b26b5342c2db8ca8 207 Pfam PF00625 Guanylate kinase 5 185 1.9E-62 T 13-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit VEA_001862 95751c4a2eb27c09b26b5342c2db8ca8 207 SUPERFAMILY SSF52540 3 189 3.75E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001862 95751c4a2eb27c09b26b5342c2db8ca8 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 13-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 VEA_001862 95751c4a2eb27c09b26b5342c2db8ca8 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 2.7E-76 T 13-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 VEA_002108 d2251df026a9c96214d9997ab2b904fb 104 SUPERFAMILY SSF55387 1 103 1.5E-38 T 13-10-2018 VEA_002108 d2251df026a9c96214d9997ab2b904fb 104 SMART SM01219 1 104 2.5E-54 T 13-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VEA_002108 d2251df026a9c96214d9997ab2b904fb 104 ProSitePatterns PS01344 Frataxin family signature. 48 62 - T 13-10-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VEA_002108 d2251df026a9c96214d9997ab2b904fb 104 Gene3D G3DSA:3.30.920.10 1 104 9.0E-38 T 13-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VEA_002108 d2251df026a9c96214d9997ab2b904fb 104 Hamap MF_00142 Iron-sulfur cluster assembly protein CyaY [cyaY]. 1 103 27.102 T 13-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VEA_002108 d2251df026a9c96214d9997ab2b904fb 104 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 103 2.0E-42 T 13-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VEA_002108 d2251df026a9c96214d9997ab2b904fb 104 Pfam PF01491 Frataxin-like domain 1 100 3.3E-29 T 13-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VEA_004158 f96abb4e16875ea661c91d3bd58c3b31 574 SUPERFAMILY SSF47831 24 143 6.41E-33 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 VEA_004158 f96abb4e16875ea661c91d3bd58c3b31 574 Gene3D G3DSA:1.10.274.10 21 146 1.7E-80 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 VEA_004158 f96abb4e16875ea661c91d3bd58c3b31 574 SUPERFAMILY SSF52009 125 243 1.27E-34 T 13-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 VEA_004158 f96abb4e16875ea661c91d3bd58c3b31 574 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 13-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 VEA_004158 f96abb4e16875ea661c91d3bd58c3b31 574 Gene3D G3DSA:3.20.20.60 234 574 3.1E-125 T 13-10-2018 VEA_004158 f96abb4e16875ea661c91d3bd58c3b31 574 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 541 9.3E-125 T 13-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 VEA_004158 f96abb4e16875ea661c91d3bd58c3b31 574 SUPERFAMILY SSF51621 249 549 9.95E-110 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VEA_004158 f96abb4e16875ea661c91d3bd58c3b31 574 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 1.2E-32 T 13-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VEA_004158 f96abb4e16875ea661c91d3bd58c3b31 574 PIRSF PIRSF000732 1 574 3.2E-219 T 13-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 VEA_004158 f96abb4e16875ea661c91d3bd58c3b31 574 Gene3D G3DSA:3.50.30.10 4 233 1.7E-80 T 13-10-2018 VEA_004158 f96abb4e16875ea661c91d3bd58c3b31 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 6.9E-30 T 13-10-2018 VEA_004158 f96abb4e16875ea661c91d3bd58c3b31 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 6.9E-30 T 13-10-2018 VEA_004158 f96abb4e16875ea661c91d3bd58c3b31 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 6.9E-30 T 13-10-2018 VEA_004158 f96abb4e16875ea661c91d3bd58c3b31 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 6.9E-30 T 13-10-2018 VEA_004158 f96abb4e16875ea661c91d3bd58c3b31 574 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 565 6.9E-247 T 13-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 VEA_004158 f96abb4e16875ea661c91d3bd58c3b31 574 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 13-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 VEA_004158 f96abb4e16875ea661c91d3bd58c3b31 574 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 1.9E-20 T 13-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VEA_001213 9ac716ab28d3a72e1f04b678dc456616 343 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 136 2.6E-32 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VEA_001213 9ac716ab28d3a72e1f04b678dc456616 343 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 5 342 9.2E-182 T 13-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 VEA_001213 9ac716ab28d3a72e1f04b678dc456616 343 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 3 342 61.008 T 13-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 VEA_001213 9ac716ab28d3a72e1f04b678dc456616 343 Gene3D G3DSA:3.40.50.720 155 288 5.1E-120 T 13-10-2018 VEA_001213 9ac716ab28d3a72e1f04b678dc456616 343 Gene3D G3DSA:3.90.180.10 22 330 5.1E-120 T 13-10-2018 VEA_001213 9ac716ab28d3a72e1f04b678dc456616 343 SUPERFAMILY SSF50129 3 175 2.89E-53 T 13-10-2018 IPR011032 GroES-like superfamily VEA_001213 9ac716ab28d3a72e1f04b678dc456616 343 SUPERFAMILY SSF51735 143 307 4.49E-37 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_001213 9ac716ab28d3a72e1f04b678dc456616 343 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 13-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 VEA_001213 9ac716ab28d3a72e1f04b678dc456616 343 Pfam PF00107 Zinc-binding dehydrogenase 176 303 3.2E-28 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VEA_001213 9ac716ab28d3a72e1f04b678dc456616 343 SMART SM00829 14 340 5.3E-5 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VEA_001999 40945fdb03d2480ac55e65aca5be5ac9 305 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 302 6.8E-169 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VEA_001999 40945fdb03d2480ac55e65aca5be5ac9 305 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 294 61.503 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VEA_001999 40945fdb03d2480ac55e65aca5be5ac9 305 SUPERFAMILY SSF55681 8 293 1.04E-131 T 13-10-2018 VEA_001999 40945fdb03d2480ac55e65aca5be5ac9 305 Gene3D G3DSA:3.30.930.10 1 215 4.5E-110 T 13-10-2018 VEA_001999 40945fdb03d2480ac55e65aca5be5ac9 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 2.7E-70 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VEA_001999 40945fdb03d2480ac55e65aca5be5ac9 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 2.7E-70 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VEA_001999 40945fdb03d2480ac55e65aca5be5ac9 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 254 270 2.7E-70 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VEA_001999 40945fdb03d2480ac55e65aca5be5ac9 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 2.7E-70 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VEA_001999 40945fdb03d2480ac55e65aca5be5ac9 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 2.7E-70 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VEA_001999 40945fdb03d2480ac55e65aca5be5ac9 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 2.7E-70 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VEA_001999 40945fdb03d2480ac55e65aca5be5ac9 305 Gene3D G3DSA:1.20.58.180 216 298 2.5E-33 T 13-10-2018 VEA_001999 40945fdb03d2480ac55e65aca5be5ac9 305 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 293 2.0E-148 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VEA_002932 c9d79ff6942fa5695f9ea3f19010d021 227 Gene3D G3DSA:3.40.50.720 1 221 1.0E-21 T 13-10-2018 VEA_002932 c9d79ff6942fa5695f9ea3f19010d021 227 SUPERFAMILY SSF51735 1 205 2.17E-21 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_002932 c9d79ff6942fa5695f9ea3f19010d021 227 Pfam PF00106 short chain dehydrogenase 7 192 3.9E-15 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_004224 a964717c7dfc41e4fd02d3bc128fa5c4 267 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 12 176 25.284 T 13-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 VEA_004224 a964717c7dfc41e4fd02d3bc128fa5c4 267 Gene3D G3DSA:2.40.40.10 83 177 6.1E-39 T 13-10-2018 IPR036908 RlpA-like domain superfamily VEA_004224 a964717c7dfc41e4fd02d3bc128fa5c4 267 Pfam PF03330 Lytic transglycolase 84 173 3.6E-28 T 13-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain VEA_004224 a964717c7dfc41e4fd02d3bc128fa5c4 267 SUPERFAMILY SSF50685 89 175 3.49E-11 T 13-10-2018 IPR036908 RlpA-like domain superfamily VEA_004224 a964717c7dfc41e4fd02d3bc128fa5c4 267 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 86 250 3.9E-47 T 13-10-2018 IPR012997 Rare lipoprotein A VEA_004224 a964717c7dfc41e4fd02d3bc128fa5c4 267 Gene3D G3DSA:3.30.70.1070 192 263 2.2E-5 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VEA_004224 a964717c7dfc41e4fd02d3bc128fa5c4 267 SUPERFAMILY SSF110997 190 262 1.2E-12 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VEA_004224 a964717c7dfc41e4fd02d3bc128fa5c4 267 Pfam PF05036 Sporulation related domain 190 260 9.7E-12 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 VEA_001386 70d65f023c64723ef029eb6d36e39f2f 1027 Gene3D G3DSA:3.30.2090.10 161 258 0.0 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_001386 70d65f023c64723ef029eb6d36e39f2f 1027 SUPERFAMILY SSF82693 118 313 2.75E-22 T 13-10-2018 VEA_001386 70d65f023c64723ef029eb6d36e39f2f 1027 Gene3D G3DSA:3.30.2090.10 701 789 0.0 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_001386 70d65f023c64723ef029eb6d36e39f2f 1027 SUPERFAMILY SSF82693 652 837 6.28E-25 T 13-10-2018 VEA_001386 70d65f023c64723ef029eb6d36e39f2f 1027 Pfam PF00873 AcrB/AcrD/AcrF family 1 1007 0.0 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_001386 70d65f023c64723ef029eb6d36e39f2f 1027 SUPERFAMILY SSF82866 280 480 2.49E-53 T 13-10-2018 VEA_001386 70d65f023c64723ef029eb6d36e39f2f 1027 SUPERFAMILY SSF82866 811 1007 5.49E-45 T 13-10-2018 VEA_001386 70d65f023c64723ef029eb6d36e39f2f 1027 SUPERFAMILY SSF82693 20 113 7.06E-23 T 13-10-2018 VEA_001386 70d65f023c64723ef029eb6d36e39f2f 1027 SUPERFAMILY SSF82714 165 255 3.66E-24 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_001386 70d65f023c64723ef029eb6d36e39f2f 1027 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1019 0.0 T 13-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 VEA_001386 70d65f023c64723ef029eb6d36e39f2f 1027 SUPERFAMILY SSF82693 545 651 6.54E-24 T 13-10-2018 VEA_001386 70d65f023c64723ef029eb6d36e39f2f 1027 Gene3D G3DSA:3.30.70.1440 649 846 0.0 T 13-10-2018 VEA_001386 70d65f023c64723ef029eb6d36e39f2f 1027 Gene3D G3DSA:3.30.70.1430 547 648 0.0 T 13-10-2018 VEA_001386 70d65f023c64723ef029eb6d36e39f2f 1027 Gene3D G3DSA:3.30.70.1320 115 315 0.0 T 13-10-2018 VEA_001386 70d65f023c64723ef029eb6d36e39f2f 1027 Gene3D G3DSA:1.20.1640.10 2 492 0.0 T 13-10-2018 VEA_001386 70d65f023c64723ef029eb6d36e39f2f 1027 SUPERFAMILY SSF82714 702 786 2.88E-21 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_001386 70d65f023c64723ef029eb6d36e39f2f 1027 Gene3D G3DSA:3.30.70.1430 20 797 0.0 T 13-10-2018 VEA_001386 70d65f023c64723ef029eb6d36e39f2f 1027 Gene3D G3DSA:1.20.1640.10 493 1004 0.0 T 13-10-2018 VEA_001386 70d65f023c64723ef029eb6d36e39f2f 1027 PRINTS PR00702 Acriflavin resistance protein family signature 532 549 4.4E-78 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_001386 70d65f023c64723ef029eb6d36e39f2f 1027 PRINTS PR00702 Acriflavin resistance protein family signature 18 36 4.4E-78 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_001386 70d65f023c64723ef029eb6d36e39f2f 1027 PRINTS PR00702 Acriflavin resistance protein family signature 453 476 4.4E-78 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_001386 70d65f023c64723ef029eb6d36e39f2f 1027 PRINTS PR00702 Acriflavin resistance protein family signature 601 615 4.4E-78 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_001386 70d65f023c64723ef029eb6d36e39f2f 1027 PRINTS PR00702 Acriflavin resistance protein family signature 346 367 4.4E-78 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_001386 70d65f023c64723ef029eb6d36e39f2f 1027 PRINTS PR00702 Acriflavin resistance protein family signature 428 451 4.4E-78 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_001386 70d65f023c64723ef029eb6d36e39f2f 1027 PRINTS PR00702 Acriflavin resistance protein family signature 374 398 4.4E-78 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_001386 70d65f023c64723ef029eb6d36e39f2f 1027 PRINTS PR00702 Acriflavin resistance protein family signature 319 342 4.4E-78 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_003675 715b2814a0981884166ce33c35052171 224 Gene3D G3DSA:1.10.10.10 1 73 2.3E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_003675 715b2814a0981884166ce33c35052171 224 Gene3D G3DSA:1.20.120.530 78 221 6.7E-27 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VEA_003675 715b2814a0981884166ce33c35052171 224 SUPERFAMILY SSF48008 78 214 7.85E-26 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VEA_003675 715b2814a0981884166ce33c35052171 224 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 72 1.5E-17 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_003675 715b2814a0981884166ce33c35052171 224 SUPERFAMILY SSF46785 9 76 1.77E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_003675 715b2814a0981884166ce33c35052171 224 Pfam PF07729 FCD domain 82 206 1.2E-24 T 13-10-2018 IPR011711 GntR, C-terminal VEA_003675 715b2814a0981884166ce33c35052171 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 3.7E-5 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_003675 715b2814a0981884166ce33c35052171 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 3.7E-5 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_003675 715b2814a0981884166ce33c35052171 224 SMART SM00895 82 207 1.7E-19 T 13-10-2018 IPR011711 GntR, C-terminal VEA_003675 715b2814a0981884166ce33c35052171 224 SMART SM00345 14 72 1.5E-17 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_003610 82e361ce6417fef5b6833f4a5e79288b 363 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 159 320 4.0E-24 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_003610 82e361ce6417fef5b6833f4a5e79288b 363 Gene3D G3DSA:1.10.3720.10 136 324 2.2E-36 T 13-10-2018 IPR035906 MetI-like superfamily VEA_003610 82e361ce6417fef5b6833f4a5e79288b 363 SUPERFAMILY SSF161098 138 320 5.1E-41 T 13-10-2018 IPR035906 MetI-like superfamily VEA_002551 12dcd49ff7c70f85eb3de7690f85df72 631 Pfam PF00364 Biotin-requiring enzyme 205 275 2.3E-21 T 13-10-2018 IPR000089 Biotin/lipoyl attachment VEA_002551 12dcd49ff7c70f85eb3de7690f85df72 631 Pfam PF00364 Biotin-requiring enzyme 106 176 6.4E-21 T 13-10-2018 IPR000089 Biotin/lipoyl attachment VEA_002551 12dcd49ff7c70f85eb3de7690f85df72 631 Pfam PF00364 Biotin-requiring enzyme 4 73 4.5E-21 T 13-10-2018 IPR000089 Biotin/lipoyl attachment VEA_002551 12dcd49ff7c70f85eb3de7690f85df72 631 Pfam PF02817 e3 binding domain 324 358 3.3E-14 T 13-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 VEA_002551 12dcd49ff7c70f85eb3de7690f85df72 631 SUPERFAMILY SSF47005 318 362 1.26E-12 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VEA_002551 12dcd49ff7c70f85eb3de7690f85df72 631 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 128 157 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 VEA_002551 12dcd49ff7c70f85eb3de7690f85df72 631 Gene3D G3DSA:4.10.320.10 323 368 1.1E-20 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VEA_002551 12dcd49ff7c70f85eb3de7690f85df72 631 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 400 630 7.0E-80 T 13-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 VEA_002551 12dcd49ff7c70f85eb3de7690f85df72 631 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 189 631 8.9E-207 T 13-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 VEA_002551 12dcd49ff7c70f85eb3de7690f85df72 631 Gene3D G3DSA:3.30.559.10 384 631 8.9E-97 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VEA_002551 12dcd49ff7c70f85eb3de7690f85df72 631 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 VEA_002551 12dcd49ff7c70f85eb3de7690f85df72 631 Gene3D G3DSA:2.40.50.100 1 80 8.5E-22 T 13-10-2018 VEA_002551 12dcd49ff7c70f85eb3de7690f85df72 631 Gene3D G3DSA:2.40.50.100 105 182 6.3E-21 T 13-10-2018 VEA_002551 12dcd49ff7c70f85eb3de7690f85df72 631 Gene3D G3DSA:2.40.50.100 203 281 1.6E-20 T 13-10-2018 VEA_002551 12dcd49ff7c70f85eb3de7690f85df72 631 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 227 256 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 VEA_002551 12dcd49ff7c70f85eb3de7690f85df72 631 SUPERFAMILY SSF51230 1 94 6.02E-24 T 13-10-2018 IPR011053 Single hybrid motif VEA_002551 12dcd49ff7c70f85eb3de7690f85df72 631 SUPERFAMILY SSF51230 204 296 1.19E-23 T 13-10-2018 IPR011053 Single hybrid motif VEA_002551 12dcd49ff7c70f85eb3de7690f85df72 631 SUPERFAMILY SSF51230 105 196 1.31E-22 T 13-10-2018 IPR011053 Single hybrid motif VEA_002551 12dcd49ff7c70f85eb3de7690f85df72 631 SUPERFAMILY SSF52777 389 630 2.8E-81 T 13-10-2018 VEA_002725 fa19e42a77e8f28bc6bfbf7af9261789 571 Gene3D G3DSA:3.30.930.10 11 465 1.1E-233 T 13-10-2018 VEA_002725 fa19e42a77e8f28bc6bfbf7af9261789 571 Pfam PF03129 Anticodon binding domain 475 568 2.9E-22 T 13-10-2018 IPR004154 Anticodon-binding VEA_002725 fa19e42a77e8f28bc6bfbf7af9261789 571 PIRSF PIRSF001535 1 571 6.3E-264 T 13-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VEA_002725 fa19e42a77e8f28bc6bfbf7af9261789 571 Pfam PF04073 Aminoacyl-tRNA editing domain 257 378 1.0E-26 T 13-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VEA_002725 fa19e42a77e8f28bc6bfbf7af9261789 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.6E-16 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 VEA_002725 fa19e42a77e8f28bc6bfbf7af9261789 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.6E-16 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 VEA_002725 fa19e42a77e8f28bc6bfbf7af9261789 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.6E-16 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 VEA_002725 fa19e42a77e8f28bc6bfbf7af9261789 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.6E-16 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 VEA_002725 fa19e42a77e8f28bc6bfbf7af9261789 571 SUPERFAMILY SSF55826 218 390 5.76E-31 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VEA_002725 fa19e42a77e8f28bc6bfbf7af9261789 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 40.905 T 13-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VEA_002725 fa19e42a77e8f28bc6bfbf7af9261789 571 SUPERFAMILY SSF55681 10 478 4.44E-97 T 13-10-2018 VEA_002725 fa19e42a77e8f28bc6bfbf7af9261789 571 SUPERFAMILY SSF52954 463 570 1.27E-33 T 13-10-2018 VEA_002725 fa19e42a77e8f28bc6bfbf7af9261789 571 Gene3D G3DSA:3.90.960.10 240 389 1.1E-233 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VEA_002725 fa19e42a77e8f28bc6bfbf7af9261789 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 567 3.7E-245 T 13-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VEA_002725 fa19e42a77e8f28bc6bfbf7af9261789 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 9.1E-39 T 13-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEA_002725 fa19e42a77e8f28bc6bfbf7af9261789 571 Gene3D G3DSA:3.40.50.800 4 554 1.1E-233 T 13-10-2018 IPR036621 Anticodon-binding domain superfamily VEA_003102 57a298083bc8d96b93a25411c1786e6f 414 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 3 144 1.1E-32 T 13-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 VEA_003102 57a298083bc8d96b93a25411c1786e6f 414 Gene3D G3DSA:3.40.50.720 4 398 3.6E-144 T 13-10-2018 VEA_003102 57a298083bc8d96b93a25411c1786e6f 414 Gene3D G3DSA:3.30.360.10 159 355 3.6E-144 T 13-10-2018 VEA_003102 57a298083bc8d96b93a25411c1786e6f 414 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 149 394 2.9E-30 T 13-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 VEA_003102 57a298083bc8d96b93a25411c1786e6f 414 SUPERFAMILY SSF51735 3 179 2.5E-15 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_002539 060c1a0f5db481e58834e5a41da89739 117 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 1.7E-52 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002539 060c1a0f5db481e58834e5a41da89739 117 Pfam PF01245 Ribosomal protein L19 3 113 7.1E-51 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002539 060c1a0f5db481e58834e5a41da89739 117 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 31.52 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002539 060c1a0f5db481e58834e5a41da89739 117 PIRSF PIRSF002191 1 117 1.1E-51 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002539 060c1a0f5db481e58834e5a41da89739 117 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 13-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_002539 060c1a0f5db481e58834e5a41da89739 117 SUPERFAMILY SSF50104 2 115 5.31E-48 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily VEA_002539 060c1a0f5db481e58834e5a41da89739 117 Gene3D G3DSA:2.30.30.790 3 117 1.6E-17 T 13-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002539 060c1a0f5db481e58834e5a41da89739 117 PRINTS PR00061 Ribosomal protein L19 signature 88 113 1.6E-41 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002539 060c1a0f5db481e58834e5a41da89739 117 PRINTS PR00061 Ribosomal protein L19 signature 34 63 1.6E-41 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002539 060c1a0f5db481e58834e5a41da89739 117 PRINTS PR00061 Ribosomal protein L19 signature 4 33 1.6E-41 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002915 5f8ab2e08a5782f2845f666f1ebdfc8b 438 Gene3D G3DSA:1.20.1250.20 252 433 2.5E-10 T 13-10-2018 VEA_002915 5f8ab2e08a5782f2845f666f1ebdfc8b 438 Gene3D G3DSA:1.20.1250.20 37 229 9.3E-8 T 13-10-2018 VEA_002915 5f8ab2e08a5782f2845f666f1ebdfc8b 438 SUPERFAMILY SSF103473 37 430 1.11E-27 T 13-10-2018 IPR036259 MFS transporter superfamily VEA_000707 da5c57445e45935a0af3cce441d3d1c2 806 Pfam PF07971 Glycosyl hydrolase family 92 285 793 2.1E-138 T 13-10-2018 IPR012939 Glycosyl hydrolase family 92 VEA_000707 da5c57445e45935a0af3cce441d3d1c2 806 Gene3D G3DSA:3.30.2080.10 342 796 8.3E-207 T 13-10-2018 VEA_000707 da5c57445e45935a0af3cce441d3d1c2 806 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 41 794 9.2E-151 T 13-10-2018 IPR005887 Alpha-1,2-mannosidase, putative VEA_000707 da5c57445e45935a0af3cce441d3d1c2 806 Gene3D G3DSA:1.20.1610.10 500 669 8.3E-207 T 13-10-2018 VEA_000707 da5c57445e45935a0af3cce441d3d1c2 806 Gene3D G3DSA:2.70.98.10 44 396 8.3E-207 T 13-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 VEA_000707 da5c57445e45935a0af3cce441d3d1c2 806 Gene3D G3DSA:1.20.1050.60 397 499 8.3E-207 T 13-10-2018 VEA_000707 da5c57445e45935a0af3cce441d3d1c2 806 SUPERFAMILY SSF48208 307 776 6.12E-22 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VEA_003277 93294b542172aff2055a635a7eac74e1 208 Pfam PF06042 Nucleotidyltransferase 50 206 1.6E-59 T 13-10-2018 IPR009267 Putative nucleotidyltransferase VEA_004430 dbcb9415ad291ddddb19aef7b22984a0 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 320 391 6.2E-15 T 13-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VEA_004430 dbcb9415ad291ddddb19aef7b22984a0 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 612 627 1.2E-22 T 13-10-2018 VEA_004430 dbcb9415ad291ddddb19aef7b22984a0 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 665 677 1.2E-22 T 13-10-2018 VEA_004430 dbcb9415ad291ddddb19aef7b22984a0 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 1.2E-22 T 13-10-2018 VEA_004430 dbcb9415ad291ddddb19aef7b22984a0 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 629 644 1.2E-22 T 13-10-2018 VEA_004430 dbcb9415ad291ddddb19aef7b22984a0 748 Gene3D G3DSA:1.10.274.10 190 314 2.5E-57 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 VEA_004430 dbcb9415ad291ddddb19aef7b22984a0 748 SUPERFAMILY SSF47831 204 311 5.89E-27 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 VEA_004430 dbcb9415ad291ddddb19aef7b22984a0 748 SUPERFAMILY SSF52009 293 412 1.57E-26 T 13-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 VEA_004430 dbcb9415ad291ddddb19aef7b22984a0 748 Gene3D G3DSA:3.20.20.60 400 739 3.1E-104 T 13-10-2018 VEA_004430 dbcb9415ad291ddddb19aef7b22984a0 748 Pfam PF01590 GAF domain 17 152 4.6E-14 T 13-10-2018 IPR003018 GAF domain GO:0005515 VEA_004430 dbcb9415ad291ddddb19aef7b22984a0 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 612 630 - T 13-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 VEA_004430 dbcb9415ad291ddddb19aef7b22984a0 748 SUPERFAMILY SSF51621 423 714 2.88E-97 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VEA_004430 dbcb9415ad291ddddb19aef7b22984a0 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 172 294 4.8E-22 T 13-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VEA_004430 dbcb9415ad291ddddb19aef7b22984a0 748 SMART SM00065 17 163 1.7E-20 T 13-10-2018 IPR003018 GAF domain GO:0005515 VEA_004430 dbcb9415ad291ddddb19aef7b22984a0 748 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 13-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 VEA_004430 dbcb9415ad291ddddb19aef7b22984a0 748 SUPERFAMILY SSF55781 2 158 3.27E-31 T 13-10-2018 VEA_004430 dbcb9415ad291ddddb19aef7b22984a0 748 Gene3D G3DSA:3.30.450.40 1 160 3.9E-40 T 13-10-2018 IPR029016 GAF-like domain superfamily VEA_004430 dbcb9415ad291ddddb19aef7b22984a0 748 Gene3D G3DSA:3.50.30.10 173 399 2.5E-57 T 13-10-2018 VEA_004430 dbcb9415ad291ddddb19aef7b22984a0 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 421 706 7.1E-96 T 13-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 VEA_004430 dbcb9415ad291ddddb19aef7b22984a0 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 171 730 9.3E-137 T 13-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 VEA_001042 cf15b5fd0610e00b81f153e4c52cee33 139 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 104 2.7E-9 T 13-10-2018 VEA_001042 cf15b5fd0610e00b81f153e4c52cee33 139 Gene3D G3DSA:3.10.180.10 2 133 2.3E-19 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEA_001042 cf15b5fd0610e00b81f153e4c52cee33 139 SUPERFAMILY SSF54593 3 130 3.89E-24 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEA_002586 47c2a11a99b3bfb3e1411fdd333d4e54 560 Gene3D G3DSA:3.90.76.10 66 172 8.4E-195 T 13-10-2018 VEA_002586 47c2a11a99b3bfb3e1411fdd333d4e54 560 SUPERFAMILY SSF53850 42 544 4.89E-106 T 13-10-2018 VEA_002586 47c2a11a99b3bfb3e1411fdd333d4e54 560 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 446 5.3E-75 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain VEA_002586 47c2a11a99b3bfb3e1411fdd333d4e54 560 Gene3D G3DSA:3.10.105.10 272 519 8.4E-195 T 13-10-2018 VEA_002586 47c2a11a99b3bfb3e1411fdd333d4e54 560 Gene3D G3DSA:3.40.190.10 46 543 8.4E-195 T 13-10-2018 VEA_002586 47c2a11a99b3bfb3e1411fdd333d4e54 560 PIRSF PIRSF002741 5 542 4.7E-66 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VEA_002586 47c2a11a99b3bfb3e1411fdd333d4e54 560 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 84 106 - T 13-10-2018 IPR023765 Solute-binding protein family 5, conserved site VEA_000300 4351394160fc864c30a479ad54a26dbb 111 SUPERFAMILY SSF101756 7 111 2.22E-33 T 13-10-2018 IPR036700 Bacterial OB-fold superfamily VEA_000300 4351394160fc864c30a479ad54a26dbb 111 Gene3D G3DSA:2.40.50.200 11 111 8.4E-34 T 13-10-2018 IPR036700 Bacterial OB-fold superfamily VEA_000300 4351394160fc864c30a479ad54a26dbb 111 Pfam PF04076 Bacterial OB fold (BOF) protein 19 110 1.5E-28 T 13-10-2018 IPR005220 Bacterial OB-fold VEA_000261 cae92eb471d3a1c7616059a8ca39f1e9 366 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 341 7.1E-100 T 13-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 VEA_000261 cae92eb471d3a1c7616059a8ca39f1e9 366 SUPERFAMILY SSF51395 3 364 7.33E-127 T 13-10-2018 VEA_000261 cae92eb471d3a1c7616059a8ca39f1e9 366 Gene3D G3DSA:3.20.20.70 1 365 4.7E-142 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_002540 2c2869ab122217ea21017a3afbcd94b0 64 Pfam PF03884 DNA gyrase inhibitor YacG 7 57 4.1E-24 T 13-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 VEA_002540 2c2869ab122217ea21017a3afbcd94b0 64 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 3 59 18.273 T 13-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 VEA_002540 2c2869ab122217ea21017a3afbcd94b0 64 SUPERFAMILY SSF57716 2 62 3.28E-21 T 13-10-2018 VEA_002540 2c2869ab122217ea21017a3afbcd94b0 64 Gene3D G3DSA:3.30.50.10 1 64 1.1E-24 T 13-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 VEA_001001 567fd975d110257fdbcd84177c13d552 300 Gene3D G3DSA:1.10.8.1080 221 299 3.5E-29 T 13-10-2018 VEA_001001 567fd975d110257fdbcd84177c13d552 300 Gene3D G3DSA:3.40.50.10490 1 220 6.7E-83 T 13-10-2018 VEA_001001 567fd975d110257fdbcd84177c13d552 300 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 8 297 5.0E-137 T 13-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 VEA_001001 567fd975d110257fdbcd84177c13d552 300 Pfam PF01380 SIS domain 129 212 3.2E-8 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VEA_001001 567fd975d110257fdbcd84177c13d552 300 SUPERFAMILY SSF53697 8 250 2.45E-72 T 13-10-2018 VEA_001001 567fd975d110257fdbcd84177c13d552 300 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 187 204 - T 13-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 VEA_001001 567fd975d110257fdbcd84177c13d552 300 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 4 297 43.78 T 13-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 VEA_003358 6aabcaf5034949a73af02f5f761e7bda 251 Gene3D G3DSA:1.10.357.10 114 249 2.3E-26 T 13-10-2018 VEA_003358 6aabcaf5034949a73af02f5f761e7bda 251 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 63 76 1.2E-7 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEA_003358 6aabcaf5034949a73af02f5f761e7bda 251 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 84 107 1.2E-7 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEA_003358 6aabcaf5034949a73af02f5f761e7bda 251 Pfam PF00440 Bacterial regulatory proteins, tetR family 63 109 5.6E-15 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEA_003358 6aabcaf5034949a73af02f5f761e7bda 251 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 197 249 5.4E-8 T 13-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type VEA_003358 6aabcaf5034949a73af02f5f761e7bda 251 Gene3D G3DSA:1.10.10.60 51 109 2.6E-21 T 13-10-2018 VEA_003358 6aabcaf5034949a73af02f5f761e7bda 251 SUPERFAMILY SSF46689 51 131 2.23E-18 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_000234 eb2b3e0950f40a46971a27afae41010a 954 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 946 0.0 T 13-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 VEA_000234 eb2b3e0950f40a46971a27afae41010a 954 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 952 25.814 T 13-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 VEA_000234 eb2b3e0950f40a46971a27afae41010a 954 SUPERFAMILY SSF53383 17 437 2.08E-100 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_000234 eb2b3e0950f40a46971a27afae41010a 954 Gene3D G3DSA:3.40.640.10 522 747 6.3E-59 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_000234 eb2b3e0950f40a46971a27afae41010a 954 Gene3D G3DSA:3.40.640.10 95 353 1.1E-105 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_000234 eb2b3e0950f40a46971a27afae41010a 954 Gene3D G3DSA:3.90.1150.10 760 894 2.5E-42 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEA_000234 eb2b3e0950f40a46971a27afae41010a 954 Pfam PF02347 Glycine cleavage system P-protein 17 438 2.6E-180 T 13-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 VEA_000234 eb2b3e0950f40a46971a27afae41010a 954 Pfam PF02347 Glycine cleavage system P-protein 458 734 3.7E-9 T 13-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 VEA_000234 eb2b3e0950f40a46971a27afae41010a 954 SUPERFAMILY SSF53383 455 947 6.41E-100 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_004356 ee47bc4a7dec2f42c61f2b1d86704bd5 617 Pfam PF00012 Hsp70 protein 22 601 2.4E-189 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEA_004356 ee47bc4a7dec2f42c61f2b1d86704bd5 617 Gene3D G3DSA:1.20.1270.10 521 616 3.1E-26 T 13-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 VEA_004356 ee47bc4a7dec2f42c61f2b1d86704bd5 617 Gene3D G3DSA:3.30.420.40 194 361 7.8E-111 T 13-10-2018 VEA_004356 ee47bc4a7dec2f42c61f2b1d86704bd5 617 PRINTS PR00301 70kDa heat shock protein signature 48 60 3.5E-53 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEA_004356 ee47bc4a7dec2f42c61f2b1d86704bd5 617 PRINTS PR00301 70kDa heat shock protein signature 20 33 3.5E-53 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEA_004356 ee47bc4a7dec2f42c61f2b1d86704bd5 617 PRINTS PR00301 70kDa heat shock protein signature 360 380 3.5E-53 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEA_004356 ee47bc4a7dec2f42c61f2b1d86704bd5 617 PRINTS PR00301 70kDa heat shock protein signature 152 172 3.5E-53 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEA_004356 ee47bc4a7dec2f42c61f2b1d86704bd5 617 PRINTS PR00301 70kDa heat shock protein signature 329 345 3.5E-53 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEA_004356 ee47bc4a7dec2f42c61f2b1d86704bd5 617 PRINTS PR00301 70kDa heat shock protein signature 466 482 3.5E-53 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEA_004356 ee47bc4a7dec2f42c61f2b1d86704bd5 617 PRINTS PR00301 70kDa heat shock protein signature 211 221 3.5E-53 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEA_004356 ee47bc4a7dec2f42c61f2b1d86704bd5 617 PRINTS PR00301 70kDa heat shock protein signature 385 404 3.5E-53 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEA_004356 ee47bc4a7dec2f42c61f2b1d86704bd5 617 SUPERFAMILY SSF53067 200 377 5.73E-50 T 13-10-2018 VEA_004356 ee47bc4a7dec2f42c61f2b1d86704bd5 617 Gene3D G3DSA:3.90.640.10 238 311 7.8E-111 T 13-10-2018 VEA_004356 ee47bc4a7dec2f42c61f2b1d86704bd5 617 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VEA_004356 ee47bc4a7dec2f42c61f2b1d86704bd5 617 Gene3D G3DSA:3.30.420.40 23 374 7.8E-111 T 13-10-2018 VEA_004356 ee47bc4a7dec2f42c61f2b1d86704bd5 617 SUPERFAMILY SSF100920 384 537 1.19E-51 T 13-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 VEA_004356 ee47bc4a7dec2f42c61f2b1d86704bd5 617 SUPERFAMILY SSF53067 19 196 4.86E-51 T 13-10-2018 VEA_004356 ee47bc4a7dec2f42c61f2b1d86704bd5 617 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 616 1.2E-268 T 13-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 VEA_004356 ee47bc4a7dec2f42c61f2b1d86704bd5 617 Gene3D G3DSA:2.60.34.10 379 520 9.3E-50 T 13-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 VEA_004356 ee47bc4a7dec2f42c61f2b1d86704bd5 617 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 617 46.469 T 13-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 VEA_004356 ee47bc4a7dec2f42c61f2b1d86704bd5 617 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VEA_004356 ee47bc4a7dec2f42c61f2b1d86704bd5 617 SUPERFAMILY SSF100934 504 616 2.75E-34 T 13-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 VEA_003309 5a729dc97ddcc0115021eb23cbff3d66 451 Pfam PF04632 Fusaric acid resistance protein family 9 233 9.1E-33 T 13-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 VEA_001406 2efc343b2ec4572a46326914fe40e0fa 263 PIRSF PIRSF016184 1 263 5.4E-48 T 13-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 VEA_001406 2efc343b2ec4572a46326914fe40e0fa 263 Gene3D G3DSA:3.10.310.10 119 251 1.4E-82 T 13-10-2018 VEA_001406 2efc343b2ec4572a46326914fe40e0fa 263 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 259 3.0E-32 T 13-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 VEA_001406 2efc343b2ec4572a46326914fe40e0fa 263 Pfam PF02567 Phenazine biosynthesis-like protein 8 259 1.2E-56 T 13-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 VEA_001406 2efc343b2ec4572a46326914fe40e0fa 263 SUPERFAMILY SSF54506 1 263 2.95E-76 T 13-10-2018 VEA_001406 2efc343b2ec4572a46326914fe40e0fa 263 Gene3D G3DSA:3.10.310.10 6 259 1.4E-82 T 13-10-2018 VEA_000894 1f9b6ab9923bd51db6c0cf065e5b238a 280 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 59 2.7E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000894 1f9b6ab9923bd51db6c0cf065e5b238a 280 Gene3D G3DSA:1.10.10.10 1 81 8.0E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000894 1f9b6ab9923bd51db6c0cf065e5b238a 280 Gene3D G3DSA:3.40.190.10 108 267 1.0E-26 T 13-10-2018 VEA_000894 1f9b6ab9923bd51db6c0cf065e5b238a 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000894 1f9b6ab9923bd51db6c0cf065e5b238a 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000894 1f9b6ab9923bd51db6c0cf065e5b238a 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000894 1f9b6ab9923bd51db6c0cf065e5b238a 280 Pfam PF03466 LysR substrate binding domain 112 274 1.6E-13 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_000894 1f9b6ab9923bd51db6c0cf065e5b238a 280 SUPERFAMILY SSF53850 83 272 1.27E-26 T 13-10-2018 VEA_000894 1f9b6ab9923bd51db6c0cf065e5b238a 280 SUPERFAMILY SSF46785 1 80 1.36E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000894 1f9b6ab9923bd51db6c0cf065e5b238a 280 Gene3D G3DSA:3.40.190.10 147 245 1.0E-26 T 13-10-2018 VEA_002114 c30e6de9e830bad643a03eb454a90f5c 238 Gene3D G3DSA:3.40.50.1000 11 231 4.1E-59 T 13-10-2018 IPR023214 HAD superfamily VEA_002114 c30e6de9e830bad643a03eb454a90f5c 238 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 196 209 5.0E-5 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEA_002114 c30e6de9e830bad643a03eb454a90f5c 238 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 5.0E-5 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEA_002114 c30e6de9e830bad643a03eb454a90f5c 238 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 150 166 5.0E-5 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEA_002114 c30e6de9e830bad643a03eb454a90f5c 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 127 201 1.6E-8 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEA_002114 c30e6de9e830bad643a03eb454a90f5c 238 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 206 7.5E-11 T 13-10-2018 VEA_002114 c30e6de9e830bad643a03eb454a90f5c 238 Gene3D G3DSA:1.20.120.1600 24 110 4.1E-59 T 13-10-2018 VEA_002114 c30e6de9e830bad643a03eb454a90f5c 238 SUPERFAMILY SSF56784 9 238 7.7E-40 T 13-10-2018 IPR036412 HAD-like superfamily VEA_000905 304157132ec4b2dc3868e2323e2c0468 103 Pfam PF07883 Cupin domain 44 101 4.6E-11 T 13-10-2018 IPR013096 Cupin 2, conserved barrel VEA_000905 304157132ec4b2dc3868e2323e2c0468 103 SUPERFAMILY SSF51182 2 102 8.66E-20 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily VEA_000905 304157132ec4b2dc3868e2323e2c0468 103 Gene3D G3DSA:2.60.120.10 13 103 9.5E-38 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VEA_003101 5838a563d78c0904fb501d7c888a69a1 958 Pfam PF00202 Aminotransferase class-III 51 464 2.7E-94 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEA_003101 5838a563d78c0904fb501d7c888a69a1 958 Gene3D G3DSA:3.40.640.10 575 843 4.0E-141 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_003101 5838a563d78c0904fb501d7c888a69a1 958 Gene3D G3DSA:1.20.1650.10 463 560 1.1E-44 T 13-10-2018 VEA_003101 5838a563d78c0904fb501d7c888a69a1 958 Gene3D G3DSA:3.90.1150.10 38 461 6.2E-132 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEA_003101 5838a563d78c0904fb501d7c888a69a1 958 SUPERFAMILY SSF53383 506 957 2.07E-112 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_003101 5838a563d78c0904fb501d7c888a69a1 958 SUPERFAMILY SSF53383 42 464 1.31E-112 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_003101 5838a563d78c0904fb501d7c888a69a1 958 Gene3D G3DSA:3.40.640.10 87 355 6.2E-132 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_003101 5838a563d78c0904fb501d7c888a69a1 958 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 34 465 2.8E-160 T 13-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 VEA_003101 5838a563d78c0904fb501d7c888a69a1 958 Gene3D G3DSA:3.90.1150.10 561 948 4.0E-141 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEA_003101 5838a563d78c0904fb501d7c888a69a1 958 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 532 892 1.0E-60 T 13-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 VEA_004273 8219a2887738b48783f2cfe3b292d2eb 490 PRINTS PR00934 X-His dipeptidase (M25) signature 454 476 2.6E-89 T 13-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VEA_004273 8219a2887738b48783f2cfe3b292d2eb 490 PRINTS PR00934 X-His dipeptidase (M25) signature 210 227 2.6E-89 T 13-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VEA_004273 8219a2887738b48783f2cfe3b292d2eb 490 PRINTS PR00934 X-His dipeptidase (M25) signature 105 123 2.6E-89 T 13-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VEA_004273 8219a2887738b48783f2cfe3b292d2eb 490 PRINTS PR00934 X-His dipeptidase (M25) signature 255 274 2.6E-89 T 13-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VEA_004273 8219a2887738b48783f2cfe3b292d2eb 490 PRINTS PR00934 X-His dipeptidase (M25) signature 432 448 2.6E-89 T 13-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VEA_004273 8219a2887738b48783f2cfe3b292d2eb 490 PRINTS PR00934 X-His dipeptidase (M25) signature 139 156 2.6E-89 T 13-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VEA_004273 8219a2887738b48783f2cfe3b292d2eb 490 PRINTS PR00934 X-His dipeptidase (M25) signature 163 181 2.6E-89 T 13-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VEA_004273 8219a2887738b48783f2cfe3b292d2eb 490 PRINTS PR00934 X-His dipeptidase (M25) signature 367 385 2.6E-89 T 13-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VEA_004273 8219a2887738b48783f2cfe3b292d2eb 490 PRINTS PR00934 X-His dipeptidase (M25) signature 84 103 2.6E-89 T 13-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VEA_004273 8219a2887738b48783f2cfe3b292d2eb 490 SUPERFAMILY SSF53187 15 486 4.92E-62 T 13-10-2018 VEA_004273 8219a2887738b48783f2cfe3b292d2eb 490 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 13 486 6.6E-183 T 13-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VEA_004273 8219a2887738b48783f2cfe3b292d2eb 490 PIRSF PIRSF016599 5 489 4.6E-216 T 13-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VEA_004273 8219a2887738b48783f2cfe3b292d2eb 490 Gene3D G3DSA:3.40.630.10 1 233 6.2E-65 T 13-10-2018 VEA_004273 8219a2887738b48783f2cfe3b292d2eb 490 Gene3D G3DSA:3.40.630.10 380 490 4.3E-23 T 13-10-2018 VEA_004273 8219a2887738b48783f2cfe3b292d2eb 490 Pfam PF01546 Peptidase family M20/M25/M40 77 477 7.8E-21 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 VEA_004273 8219a2887738b48783f2cfe3b292d2eb 490 Pfam PF07687 Peptidase dimerisation domain 211 296 2.7E-8 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain VEA_001663 2ac62dcf583ce8d4ce29cd25fc9b9cad 427 Hamap MF_01183 Chaperone SurA [surA]. 8 423 31.995 T 13-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 VEA_001663 2ac62dcf583ce8d4ce29cd25fc9b9cad 427 Gene3D G3DSA:3.10.50.40 274 415 5.2E-39 T 13-10-2018 VEA_001663 2ac62dcf583ce8d4ce29cd25fc9b9cad 427 Pfam PF13616 PPIC-type PPIASE domain 276 378 1.6E-23 T 13-10-2018 VEA_001663 2ac62dcf583ce8d4ce29cd25fc9b9cad 427 Pfam PF13616 PPIC-type PPIASE domain 163 269 1.9E-20 T 13-10-2018 VEA_001663 2ac62dcf583ce8d4ce29cd25fc9b9cad 427 SUPERFAMILY SSF54534 278 380 1.83E-29 T 13-10-2018 VEA_001663 2ac62dcf583ce8d4ce29cd25fc9b9cad 427 Pfam PF09312 SurA N-terminal domain 24 141 2.9E-43 T 13-10-2018 IPR015391 SurA N-terminal VEA_001663 2ac62dcf583ce8d4ce29cd25fc9b9cad 427 Gene3D G3DSA:3.10.50.40 171 270 1.3E-68 T 13-10-2018 VEA_001663 2ac62dcf583ce8d4ce29cd25fc9b9cad 427 SUPERFAMILY SSF109998 24 196 8.83E-38 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily VEA_001663 2ac62dcf583ce8d4ce29cd25fc9b9cad 427 SUPERFAMILY SSF54534 172 270 6.21E-24 T 13-10-2018 VEA_001663 2ac62dcf583ce8d4ce29cd25fc9b9cad 427 Gene3D G3DSA:1.10.4030.30 25 271 1.3E-68 T 13-10-2018 VEA_002552 6cdc5b7d927a3b25068c528195439c8f 475 Gene3D G3DSA:3.50.50.60 9 332 3.9E-122 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_002552 6cdc5b7d927a3b25068c528195439c8f 475 SUPERFAMILY SSF51905 3 337 2.06E-56 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_002552 6cdc5b7d927a3b25068c528195439c8f 475 Gene3D G3DSA:3.30.390.30 346 467 2.3E-45 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VEA_002552 6cdc5b7d927a3b25068c528195439c8f 475 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 8 460 6.8E-151 T 13-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 VEA_002552 6cdc5b7d927a3b25068c528195439c8f 475 SUPERFAMILY SSF55424 343 466 2.58E-39 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VEA_002552 6cdc5b7d927a3b25068c528195439c8f 475 PIRSF PIRSF000350 1 468 2.2E-83 T 13-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 VEA_002552 6cdc5b7d927a3b25068c528195439c8f 475 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 7.7E-64 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VEA_002552 6cdc5b7d927a3b25068c528195439c8f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 2.4E-68 T 13-10-2018 VEA_002552 6cdc5b7d927a3b25068c528195439c8f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 2.4E-68 T 13-10-2018 VEA_002552 6cdc5b7d927a3b25068c528195439c8f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 2.4E-68 T 13-10-2018 VEA_002552 6cdc5b7d927a3b25068c528195439c8f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 2.4E-68 T 13-10-2018 VEA_002552 6cdc5b7d927a3b25068c528195439c8f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 2.4E-68 T 13-10-2018 VEA_002552 6cdc5b7d927a3b25068c528195439c8f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 2.4E-68 T 13-10-2018 VEA_002552 6cdc5b7d927a3b25068c528195439c8f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 2.4E-68 T 13-10-2018 VEA_002552 6cdc5b7d927a3b25068c528195439c8f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 2.4E-68 T 13-10-2018 VEA_002552 6cdc5b7d927a3b25068c528195439c8f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 2.4E-68 T 13-10-2018 VEA_002552 6cdc5b7d927a3b25068c528195439c8f 475 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 13-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 VEA_002552 6cdc5b7d927a3b25068c528195439c8f 475 Gene3D G3DSA:3.50.50.60 150 271 3.9E-122 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_002552 6cdc5b7d927a3b25068c528195439c8f 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 7.9E-41 T 13-10-2018 VEA_002552 6cdc5b7d927a3b25068c528195439c8f 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 7.9E-41 T 13-10-2018 VEA_002552 6cdc5b7d927a3b25068c528195439c8f 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 7.9E-41 T 13-10-2018 VEA_002552 6cdc5b7d927a3b25068c528195439c8f 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 7.9E-41 T 13-10-2018 VEA_002552 6cdc5b7d927a3b25068c528195439c8f 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 7.9E-41 T 13-10-2018 VEA_002552 6cdc5b7d927a3b25068c528195439c8f 475 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 7.2E-36 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VEA_002269 07e30ce9c83f2abf1d54e1f02e72d7a5 248 Pfam PF00588 SpoU rRNA Methylase family 97 237 2.2E-39 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VEA_002269 07e30ce9c83f2abf1d54e1f02e72d7a5 248 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 79 3.0E-19 T 13-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 VEA_002269 07e30ce9c83f2abf1d54e1f02e72d7a5 248 Gene3D G3DSA:3.40.1280.10 78 244 4.0E-64 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VEA_002269 07e30ce9c83f2abf1d54e1f02e72d7a5 248 SUPERFAMILY SSF55315 3 77 1.41E-19 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like VEA_002269 07e30ce9c83f2abf1d54e1f02e72d7a5 248 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 243 4.8E-86 T 13-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 VEA_002269 07e30ce9c83f2abf1d54e1f02e72d7a5 248 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 3 244 43.221 T 13-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB VEA_002269 07e30ce9c83f2abf1d54e1f02e72d7a5 248 Gene3D G3DSA:3.30.1330.30 1 77 1.0E-26 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like VEA_002269 07e30ce9c83f2abf1d54e1f02e72d7a5 248 SUPERFAMILY SSF75217 69 246 7.19E-49 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases VEA_002269 07e30ce9c83f2abf1d54e1f02e72d7a5 248 SMART SM00967 5 81 1.2E-19 T 13-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 VEA_003690 0ae987a93b24533807b95d5fb466f553 204 Gene3D G3DSA:3.40.50.1240 1 204 1.6E-58 T 13-10-2018 IPR029033 Histidine phosphatase superfamily VEA_003690 0ae987a93b24533807b95d5fb466f553 204 PIRSF PIRSF000709 4 187 0.0063 T 13-10-2018 VEA_003690 0ae987a93b24533807b95d5fb466f553 204 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 187 2.1E-36 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 VEA_003690 0ae987a93b24533807b95d5fb466f553 204 SMART SM00855 5 154 1.9E-11 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 VEA_003690 0ae987a93b24533807b95d5fb466f553 204 SUPERFAMILY SSF53254 1 188 1.09E-36 T 13-10-2018 IPR029033 Histidine phosphatase superfamily VEA_002161 be3e1894e0827c526bb059baa4390ceb 131 SUPERFAMILY SSF55729 13 96 1.77E-10 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_002161 be3e1894e0827c526bb059baa4390ceb 131 Pfam PF13508 Acetyltransferase (GNAT) domain 17 90 2.4E-7 T 13-10-2018 IPR000182 GNAT domain VEA_002161 be3e1894e0827c526bb059baa4390ceb 131 Gene3D G3DSA:3.40.630.30 3 116 4.0E-9 T 13-10-2018 VEA_003719 d5fbd7c95c11018254dae28c4f8872c3 235 SUPERFAMILY SSF64288 56 230 1.22E-37 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VEA_003719 d5fbd7c95c11018254dae28c4f8872c3 235 SMART SM00866 91 228 2.5E-29 T 13-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VEA_003719 d5fbd7c95c11018254dae28c4f8872c3 235 Pfam PF07702 UTRA domain 92 228 2.0E-34 T 13-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VEA_003719 d5fbd7c95c11018254dae28c4f8872c3 235 Gene3D G3DSA:3.40.1410.10 89 224 1.9E-32 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VEA_003719 d5fbd7c95c11018254dae28c4f8872c3 235 Gene3D G3DSA:1.10.10.10 1 69 4.1E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_003719 d5fbd7c95c11018254dae28c4f8872c3 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 68 4.1E-15 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_003719 d5fbd7c95c11018254dae28c4f8872c3 235 SMART SM00345 9 68 2.2E-16 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_003719 d5fbd7c95c11018254dae28c4f8872c3 235 SUPERFAMILY SSF46785 3 72 5.64E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_003719 d5fbd7c95c11018254dae28c4f8872c3 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 1.7E-6 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_003719 d5fbd7c95c11018254dae28c4f8872c3 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 1.7E-6 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_003719 d5fbd7c95c11018254dae28c4f8872c3 235 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 4 233 1.8E-91 T 13-10-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 VEA_001444 792f720d5c59e46c9a28097af6aed306 564 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 293 308 5.1E-8 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_001444 792f720d5c59e46c9a28097af6aed306 564 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 226 245 5.1E-8 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_001444 792f720d5c59e46c9a28097af6aed306 564 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 138 152 5.1E-8 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_001444 792f720d5c59e46c9a28097af6aed306 564 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 41 180 8.8E-42 T 13-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_001444 792f720d5c59e46c9a28097af6aed306 564 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 478 531 3.0E-8 T 13-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_001444 792f720d5c59e46c9a28097af6aed306 564 Gene3D G3DSA:3.40.120.10 322 441 3.8E-30 T 13-10-2018 VEA_001444 792f720d5c59e46c9a28097af6aed306 564 SUPERFAMILY SSF53738 301 443 3.45E-31 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_001444 792f720d5c59e46c9a28097af6aed306 564 Gene3D G3DSA:3.40.120.10 205 321 4.3E-21 T 13-10-2018 VEA_001444 792f720d5c59e46c9a28097af6aed306 564 Gene3D G3DSA:3.30.310.50 448 557 4.4E-8 T 13-10-2018 VEA_001444 792f720d5c59e46c9a28097af6aed306 564 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 139 148 - T 13-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_001444 792f720d5c59e46c9a28097af6aed306 564 SUPERFAMILY SSF55957 432 555 1.44E-15 T 13-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_001444 792f720d5c59e46c9a28097af6aed306 564 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 209 309 2.6E-24 T 13-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_001444 792f720d5c59e46c9a28097af6aed306 564 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 321 438 3.3E-18 T 13-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_001444 792f720d5c59e46c9a28097af6aed306 564 Gene3D G3DSA:3.40.120.10 33 184 1.1E-46 T 13-10-2018 VEA_001444 792f720d5c59e46c9a28097af6aed306 564 SUPERFAMILY SSF53738 204 311 3.18E-21 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_001444 792f720d5c59e46c9a28097af6aed306 564 SUPERFAMILY SSF53738 28 230 1.69E-44 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_000193 dbd3518e1cb6510479b70352714679b8 483 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 28 280 5.7E-75 T 13-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 VEA_000193 dbd3518e1cb6510479b70352714679b8 483 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 170 180 - T 13-10-2018 IPR024002 Formate/nitrite transporter, conserved site VEA_000193 dbd3518e1cb6510479b70352714679b8 483 Gene3D G3DSA:3.10.580.10 309 466 1.5E-24 T 13-10-2018 VEA_000193 dbd3518e1cb6510479b70352714679b8 483 Gene3D G3DSA:1.20.1080.10 4 270 1.6E-87 T 13-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VEA_000193 dbd3518e1cb6510479b70352714679b8 483 SUPERFAMILY SSF54631 311 464 1.27E-21 T 13-10-2018 VEA_000193 dbd3518e1cb6510479b70352714679b8 483 SMART SM00116 320 368 2.4E-7 T 13-10-2018 IPR000644 CBS domain VEA_000193 dbd3518e1cb6510479b70352714679b8 483 SMART SM00116 418 465 25.0 T 13-10-2018 IPR000644 CBS domain VEA_000193 dbd3518e1cb6510479b70352714679b8 483 Pfam PF01226 Formate/nitrite transporter 17 277 5.7E-71 T 13-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 VEA_000193 dbd3518e1cb6510479b70352714679b8 483 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 16 281 4.5E-112 T 13-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 VEA_000193 dbd3518e1cb6510479b70352714679b8 483 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 85 94 - T 13-10-2018 IPR024002 Formate/nitrite transporter, conserved site VEA_000193 dbd3518e1cb6510479b70352714679b8 483 Pfam PF00571 CBS domain 313 365 5.8E-10 T 13-10-2018 IPR000644 CBS domain VEA_000193 dbd3518e1cb6510479b70352714679b8 483 Pfam PF00571 CBS domain 382 464 8.3E-4 T 13-10-2018 IPR000644 CBS domain VEA_000912 1c984a6d383b4a7610fda19c93665be0 385 SUPERFAMILY SSF82171 15 382 3.92E-25 T 13-10-2018 VEA_000912 1c984a6d383b4a7610fda19c93665be0 385 Gene3D G3DSA:2.130.10.10 1 385 9.3E-170 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VEA_000912 1c984a6d383b4a7610fda19c93665be0 385 Pfam PF14583 Oligogalacturonate lyase 1 385 9.6E-242 T 13-10-2018 IPR027946 Oligogalacturonate lyase domain GO:0045490|GO:0047487 KEGG: 00040+4.2.2.6 VEA_000839 78a83d706b09b2a4c31d774632f0d2d7 276 Pfam PF10670 Domain of unknown function (DUF4198) 24 251 8.8E-48 T 13-10-2018 IPR019613 Protein of unknown function DUF4198 VEA_000585 06696047ed83a7f513d2ce4ee2755914 143 Pfam PF03733 Inner membrane component domain 4 54 2.2E-14 T 13-10-2018 IPR005185 Inner membrane component domain VEA_000585 06696047ed83a7f513d2ce4ee2755914 143 Pfam PF03733 Inner membrane component domain 76 126 2.1E-18 T 13-10-2018 IPR005185 Inner membrane component domain VEA_000585 06696047ed83a7f513d2ce4ee2755914 143 PIRSF PIRSF028777 1 138 4.0E-51 T 13-10-2018 IPR031308 Uncharacterised conserved protein UCP028777 VEA_001641 dd4baaf537e8a6899b7fd7324f020ef6 230 SUPERFAMILY SSF52172 2 117 7.68E-38 T 13-10-2018 IPR011006 CheY-like superfamily VEA_001641 dd4baaf537e8a6899b7fd7324f020ef6 230 Gene3D G3DSA:3.40.50.2300 1 121 1.3E-37 T 13-10-2018 VEA_001641 dd4baaf537e8a6899b7fd7324f020ef6 230 Gene3D G3DSA:1.10.10.10 127 229 1.2E-30 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001641 dd4baaf537e8a6899b7fd7324f020ef6 230 SUPERFAMILY SSF46894 127 225 3.4E-29 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEA_001641 dd4baaf537e8a6899b7fd7324f020ef6 230 Pfam PF00072 Response regulator receiver domain 3 113 2.0E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_001641 dd4baaf537e8a6899b7fd7324f020ef6 230 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 224 1.0E-99 T 13-10-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 VEA_001641 dd4baaf537e8a6899b7fd7324f020ef6 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 224 5.5E-26 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEA_001641 dd4baaf537e8a6899b7fd7324f020ef6 230 SMART SM00448 1 112 2.5E-40 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_001641 dd4baaf537e8a6899b7fd7324f020ef6 230 SMART SM00862 149 224 9.8E-25 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEA_002315 7b2772d51740be7dd1956d45d8bf3184 624 SUPERFAMILY SSF48557 3 456 3.93E-141 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 VEA_002315 7b2772d51740be7dd1956d45d8bf3184 624 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 9.3E-68 T 13-10-2018 VEA_002315 7b2772d51740be7dd1956d45d8bf3184 624 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 9.3E-68 T 13-10-2018 VEA_002315 7b2772d51740be7dd1956d45d8bf3184 624 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 9.3E-68 T 13-10-2018 VEA_002315 7b2772d51740be7dd1956d45d8bf3184 624 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 9.3E-68 T 13-10-2018 VEA_002315 7b2772d51740be7dd1956d45d8bf3184 624 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 9.3E-68 T 13-10-2018 VEA_002315 7b2772d51740be7dd1956d45d8bf3184 624 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 9.3E-68 T 13-10-2018 VEA_002315 7b2772d51740be7dd1956d45d8bf3184 624 PIRSF PIRSF036456 1 624 0.0 T 13-10-2018 IPR011244 Bifunctional argininosuccinate lyase/acetyltransferase GO:0004056|GO:0005737|GO:0006526|GO:0016746 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VEA_002315 7b2772d51740be7dd1956d45d8bf3184 624 Gene3D G3DSA:3.40.630.30 462 604 1.5E-25 T 13-10-2018 VEA_002315 7b2772d51740be7dd1956d45d8bf3184 624 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 2.2E-202 T 13-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VEA_002315 7b2772d51740be7dd1956d45d8bf3184 624 SUPERFAMILY SSF55729 466 584 2.96E-16 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_002315 7b2772d51740be7dd1956d45d8bf3184 624 Pfam PF00583 Acetyltransferase (GNAT) family 500 568 5.5E-9 T 13-10-2018 IPR000182 GNAT domain VEA_002315 7b2772d51740be7dd1956d45d8bf3184 624 Pfam PF00206 Lyase 6 301 4.4E-88 T 13-10-2018 IPR022761 Fumarate lyase, N-terminal VEA_002315 7b2772d51740be7dd1956d45d8bf3184 624 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 13-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 VEA_002315 7b2772d51740be7dd1956d45d8bf3184 624 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 40.279 T 13-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VEA_002315 7b2772d51740be7dd1956d45d8bf3184 624 Gene3D G3DSA:1.10.275.10 1 107 6.6E-36 T 13-10-2018 IPR024083 Fumarase/histidase, N-terminal VEA_002315 7b2772d51740be7dd1956d45d8bf3184 624 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 5.2E-25 T 13-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VEA_002315 7b2772d51740be7dd1956d45d8bf3184 624 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 5.5E-28 T 13-10-2018 IPR000362 Fumarate lyase family VEA_002315 7b2772d51740be7dd1956d45d8bf3184 624 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 5.5E-28 T 13-10-2018 IPR000362 Fumarate lyase family VEA_002315 7b2772d51740be7dd1956d45d8bf3184 624 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 5.5E-28 T 13-10-2018 IPR000362 Fumarate lyase family VEA_002315 7b2772d51740be7dd1956d45d8bf3184 624 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 5.5E-28 T 13-10-2018 IPR000362 Fumarate lyase family VEA_002315 7b2772d51740be7dd1956d45d8bf3184 624 Gene3D G3DSA:1.20.200.10 108 446 3.8E-147 T 13-10-2018 VEA_002315 7b2772d51740be7dd1956d45d8bf3184 624 Gene3D G3DSA:1.10.40.30 363 433 3.8E-147 T 13-10-2018 VEA_002126 5c9e7b76fe1d10cbe3b7dbd62eb4d1a7 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 13-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002126 5c9e7b76fe1d10cbe3b7dbd62eb4d1a7 333 SUPERFAMILY SSF51735 1 173 2.32E-54 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_002126 5c9e7b76fe1d10cbe3b7dbd62eb4d1a7 333 PIRSF PIRSF000149 1 331 1.3E-116 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002126 5c9e7b76fe1d10cbe3b7dbd62eb4d1a7 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 101 2.1E-32 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002126 5c9e7b76fe1d10cbe3b7dbd62eb4d1a7 333 SMART SM00846 3 152 2.8E-73 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002126 5c9e7b76fe1d10cbe3b7dbd62eb4d1a7 333 SUPERFAMILY SSF55347 152 314 1.58E-63 T 13-10-2018 VEA_002126 5c9e7b76fe1d10cbe3b7dbd62eb4d1a7 333 Gene3D G3DSA:3.40.50.720 4 327 7.7E-128 T 13-10-2018 VEA_002126 5c9e7b76fe1d10cbe3b7dbd62eb4d1a7 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 108 121 1.1E-28 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002126 5c9e7b76fe1d10cbe3b7dbd62eb4d1a7 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 1.1E-28 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002126 5c9e7b76fe1d10cbe3b7dbd62eb4d1a7 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 1.1E-28 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002126 5c9e7b76fe1d10cbe3b7dbd62eb4d1a7 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 1.1E-28 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002126 5c9e7b76fe1d10cbe3b7dbd62eb4d1a7 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 1.1E-28 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002126 5c9e7b76fe1d10cbe3b7dbd62eb4d1a7 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 5.0E-60 T 13-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002126 5c9e7b76fe1d10cbe3b7dbd62eb4d1a7 333 Gene3D G3DSA:3.30.360.10 151 315 7.7E-128 T 13-10-2018 VEA_002126 5c9e7b76fe1d10cbe3b7dbd62eb4d1a7 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 323 3.7E-120 T 13-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_003007 d822431060b3dd06ec9c5fba4af72270 488 Pfam PF00209 Sodium:neurotransmitter symporter family 123 466 1.0E-78 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEA_003007 d822431060b3dd06ec9c5fba4af72270 488 Pfam PF00209 Sodium:neurotransmitter symporter family 3 120 1.0E-38 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEA_003007 d822431060b3dd06ec9c5fba4af72270 488 SUPERFAMILY SSF161070 3 477 5.36E-149 T 13-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 VEA_003007 d822431060b3dd06ec9c5fba4af72270 488 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 27 41 - T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEA_003007 d822431060b3dd06ec9c5fba4af72270 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 40 59 9.0E-36 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEA_003007 d822431060b3dd06ec9c5fba4af72270 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 257 277 9.0E-36 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEA_003007 d822431060b3dd06ec9c5fba4af72270 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 429 449 9.0E-36 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEA_003007 d822431060b3dd06ec9c5fba4af72270 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 11 32 9.0E-36 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEA_003007 d822431060b3dd06ec9c5fba4af72270 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 388 408 9.0E-36 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEA_003007 d822431060b3dd06ec9c5fba4af72270 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 84 110 9.0E-36 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEA_003007 d822431060b3dd06ec9c5fba4af72270 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 311 330 9.0E-36 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEA_003216 00cfbe4f310dd8bc7edc01427e579c8b 41 Pfam PF11665 Protein of unknown function (DUF3265) 14 41 6.0E-15 T 13-10-2018 IPR021681 Protein of unknown function DUF3265 VEA_001869 2890159fd33c89ca4775e6088e728540 430 SMART SM00387 321 430 3.9E-26 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_001869 2890159fd33c89ca4775e6088e728540 430 SUPERFAMILY SSF55874 284 429 4.06E-34 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_001869 2890159fd33c89ca4775e6088e728540 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 1.2E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_001869 2890159fd33c89ca4775e6088e728540 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 409 1.2E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_001869 2890159fd33c89ca4775e6088e728540 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 386 1.2E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_001869 2890159fd33c89ca4775e6088e728540 430 SUPERFAMILY SSF47384 215 277 5.49E-12 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEA_001869 2890159fd33c89ca4775e6088e728540 430 Gene3D G3DSA:3.30.565.10 284 430 5.8E-37 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_001869 2890159fd33c89ca4775e6088e728540 430 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 324 428 7.1E-20 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_001869 2890159fd33c89ca4775e6088e728540 430 Pfam PF00672 HAMP domain 169 217 1.2E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_001869 2890159fd33c89ca4775e6088e728540 430 SMART SM00304 169 221 1.4E-9 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_001869 2890159fd33c89ca4775e6088e728540 430 Pfam PF00512 His Kinase A (phospho-acceptor) domain 225 276 2.7E-9 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_001869 2890159fd33c89ca4775e6088e728540 430 Gene3D G3DSA:1.10.287.130 167 277 2.6E-23 T 13-10-2018 VEA_001869 2890159fd33c89ca4775e6088e728540 430 SMART SM00388 222 282 2.3E-9 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_003652 845ea8b22de228599412e21051fc9a2b 222 SUPERFAMILY SSF52833 5 89 3.5E-20 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VEA_003652 845ea8b22de228599412e21051fc9a2b 222 Gene3D G3DSA:1.20.1050.10 89 222 3.1E-43 T 13-10-2018 VEA_003652 845ea8b22de228599412e21051fc9a2b 222 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 6 220 5.1E-79 T 13-10-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 VEA_003652 845ea8b22de228599412e21051fc9a2b 222 SUPERFAMILY SSF47616 88 220 3.69E-24 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VEA_003652 845ea8b22de228599412e21051fc9a2b 222 Gene3D G3DSA:3.40.30.10 7 83 1.6E-23 T 13-10-2018 VEA_003652 845ea8b22de228599412e21051fc9a2b 222 Pfam PF13417 Glutathione S-transferase, N-terminal domain 7 84 2.1E-14 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VEA_003652 845ea8b22de228599412e21051fc9a2b 222 Pfam PF00043 Glutathione S-transferase, C-terminal domain 144 207 3.3E-4 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal VEA_000866 3da06c06ebad877de47b8e1a4e297d13 316 Pfam PF09084 NMT1/THI5 like 37 248 2.3E-70 T 13-10-2018 IPR015168 SsuA/THI5-like VEA_000866 3da06c06ebad877de47b8e1a4e297d13 316 Gene3D G3DSA:3.40.190.10 109 209 1.8E-72 T 13-10-2018 VEA_000866 3da06c06ebad877de47b8e1a4e297d13 316 Gene3D G3DSA:3.40.190.10 28 303 1.8E-72 T 13-10-2018 VEA_000866 3da06c06ebad877de47b8e1a4e297d13 316 SUPERFAMILY SSF53850 29 311 4.03E-49 T 13-10-2018 VEA_003617 3cc0a7f31ff90f8f871db5cf0bee2b0f 218 SMART SM00862 145 216 2.0E-21 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEA_003617 3cc0a7f31ff90f8f871db5cf0bee2b0f 218 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 216 3.5E-19 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEA_003617 3cc0a7f31ff90f8f871db5cf0bee2b0f 218 SUPERFAMILY SSF52172 1 173 6.01E-36 T 13-10-2018 IPR011006 CheY-like superfamily VEA_003617 3cc0a7f31ff90f8f871db5cf0bee2b0f 218 Gene3D G3DSA:3.40.50.2300 1 121 2.0E-36 T 13-10-2018 VEA_003617 3cc0a7f31ff90f8f871db5cf0bee2b0f 218 Gene3D G3DSA:1.10.10.10 122 218 2.1E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_003617 3cc0a7f31ff90f8f871db5cf0bee2b0f 218 Pfam PF00072 Response regulator receiver domain 4 112 7.0E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_003617 3cc0a7f31ff90f8f871db5cf0bee2b0f 218 SMART SM00448 1 112 1.6E-34 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_001761 353c44c27de1ec3772cce77ef0813017 388 PIRSF PIRSF500134 1 343 2.0E-122 T 13-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 VEA_001761 353c44c27de1ec3772cce77ef0813017 388 PIRSF PIRSF500134 338 388 0.0044 T 13-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 VEA_001761 353c44c27de1ec3772cce77ef0813017 388 Gene3D G3DSA:3.40.50.720 222 388 2.4E-68 T 13-10-2018 VEA_001761 353c44c27de1ec3772cce77ef0813017 388 PIRSF PIRSF000124 1 388 1.6E-138 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 VEA_001761 353c44c27de1ec3772cce77ef0813017 388 Gene3D G3DSA:3.40.50.720 1 193 2.2E-59 T 13-10-2018 VEA_001761 353c44c27de1ec3772cce77ef0813017 388 SUPERFAMILY SSF52413 283 387 1.7E-28 T 13-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 VEA_001761 353c44c27de1ec3772cce77ef0813017 388 Gene3D G3DSA:1.20.5.100 194 220 6.9E-20 T 13-10-2018 VEA_001761 353c44c27de1ec3772cce77ef0813017 388 SUPERFAMILY SSF48179 191 287 2.55E-30 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VEA_001761 353c44c27de1ec3772cce77ef0813017 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 1.6E-104 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 VEA_001761 353c44c27de1ec3772cce77ef0813017 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 375 1.2E-8 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VEA_001761 353c44c27de1ec3772cce77ef0813017 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 1.3E-26 T 13-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VEA_001761 353c44c27de1ec3772cce77ef0813017 388 SUPERFAMILY SSF51735 1 194 9.72E-48 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_001761 353c44c27de1ec3772cce77ef0813017 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 169 1.0E-30 T 13-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VEA_001761 353c44c27de1ec3772cce77ef0813017 388 SMART SM00984 300 387 1.1E-15 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VEA_001159 250c5ed4c391615cb59b2e845fa2ad7b 145 Pfam PF09278 MerR, DNA binding 47 106 2.9E-11 T 13-10-2018 IPR015358 Transcription regulator MerR, DNA binding VEA_001159 250c5ed4c391615cb59b2e845fa2ad7b 145 SMART SM00422 1 70 2.4E-17 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEA_001159 250c5ed4c391615cb59b2e845fa2ad7b 145 SUPERFAMILY SSF46955 1 112 1.25E-25 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily VEA_001159 250c5ed4c391615cb59b2e845fa2ad7b 145 Gene3D G3DSA:1.10.1660.10 1 140 7.2E-26 T 13-10-2018 VEA_001159 250c5ed4c391615cb59b2e845fa2ad7b 145 Pfam PF00376 MerR family regulatory protein 2 39 3.4E-15 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEA_001159 250c5ed4c391615cb59b2e845fa2ad7b 145 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEA_001159 250c5ed4c391615cb59b2e845fa2ad7b 145 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 7.4E-6 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEA_001159 250c5ed4c391615cb59b2e845fa2ad7b 145 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 7.4E-6 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEA_001159 250c5ed4c391615cb59b2e845fa2ad7b 145 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 7.4E-6 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEA_004516 92b4dcfab199d934f9f3069217b26d8c 761 SUPERFAMILY SSF101904 499 743 2.49E-51 T 13-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal VEA_004516 92b4dcfab199d934f9f3069217b26d8c 761 Gene3D G3DSA:3.90.199.10 34 483 4.9E-180 T 13-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 VEA_004516 92b4dcfab199d934f9f3069217b26d8c 761 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 600 636 0.14 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VEA_004516 92b4dcfab199d934f9f3069217b26d8c 761 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 647 693 1.4E-7 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VEA_004516 92b4dcfab199d934f9f3069217b26d8c 761 SUPERFAMILY SSF56719 33 485 4.05E-156 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VEA_004516 92b4dcfab199d934f9f3069217b26d8c 761 Gene3D G3DSA:2.120.10.90 502 745 6.3E-15 T 13-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal VEA_004516 92b4dcfab199d934f9f3069217b26d8c 761 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 10 744 0.0 T 13-10-2018 VEA_004516 92b4dcfab199d934f9f3069217b26d8c 761 SMART SM00434 13 463 1.3E-233 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VEA_004516 92b4dcfab199d934f9f3069217b26d8c 761 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 6 745 33.911 T 13-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VEA_004516 92b4dcfab199d934f9f3069217b26d8c 761 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 34 470 4.8E-136 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VEA_004516 92b4dcfab199d934f9f3069217b26d8c 761 Gene3D G3DSA:1.10.268.10 371 456 4.9E-180 T 13-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VEA_004516 92b4dcfab199d934f9f3069217b26d8c 761 Gene3D G3DSA:3.30.1360.40 240 333 4.9E-180 T 13-10-2018 VEA_001624 a0a76e8cca4202e861af73badde5e5a7 620 Gene3D G3DSA:1.10.10.10 459 535 2.6E-32 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001624 a0a76e8cca4202e861af73badde5e5a7 620 Gene3D G3DSA:1.10.220.120 1 64 2.0E-29 T 13-10-2018 VEA_001624 a0a76e8cca4202e861af73badde5e5a7 620 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 382 618 2.0E-120 T 13-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 VEA_001624 a0a76e8cca4202e861af73badde5e5a7 620 Pfam PF04542 Sigma-70 region 2 386 455 1.7E-21 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VEA_001624 a0a76e8cca4202e861af73badde5e5a7 620 PRINTS PR00046 Major sigma-70 factor signature 434 442 3.2E-31 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEA_001624 a0a76e8cca4202e861af73badde5e5a7 620 PRINTS PR00046 Major sigma-70 factor signature 594 605 3.2E-31 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEA_001624 a0a76e8cca4202e861af73badde5e5a7 620 PRINTS PR00046 Major sigma-70 factor signature 558 570 3.2E-31 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEA_001624 a0a76e8cca4202e861af73badde5e5a7 620 PRINTS PR00046 Major sigma-70 factor signature 410 423 3.2E-31 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEA_001624 a0a76e8cca4202e861af73badde5e5a7 620 PRINTS PR00046 Major sigma-70 factor signature 579 594 3.2E-31 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEA_001624 a0a76e8cca4202e861af73badde5e5a7 620 Pfam PF04539 Sigma-70 region 3 465 540 1.3E-28 T 13-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 VEA_001624 a0a76e8cca4202e861af73badde5e5a7 620 SUPERFAMILY SSF88659 516 618 1.74E-25 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VEA_001624 a0a76e8cca4202e861af73badde5e5a7 620 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 1.3E-12 T 13-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VEA_001624 a0a76e8cca4202e861af73badde5e5a7 620 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 579 605 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEA_001624 a0a76e8cca4202e861af73badde5e5a7 620 SUPERFAMILY SSF88659 459 532 2.22E-20 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VEA_001624 a0a76e8cca4202e861af73badde5e5a7 620 Gene3D G3DSA:1.10.601.10 113 455 2.1E-139 T 13-10-2018 VEA_001624 a0a76e8cca4202e861af73badde5e5a7 620 Pfam PF04546 Sigma-70, non-essential region 139 355 3.5E-67 T 13-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VEA_001624 a0a76e8cca4202e861af73badde5e5a7 620 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 410 423 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEA_001624 a0a76e8cca4202e861af73badde5e5a7 620 Pfam PF03979 Sigma-70 factor, region 1.1 5 80 7.0E-29 T 13-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 VEA_001624 a0a76e8cca4202e861af73badde5e5a7 620 SUPERFAMILY SSF88946 115 453 8.77E-96 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VEA_001624 a0a76e8cca4202e861af73badde5e5a7 620 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 382 607 5.3E-37 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VEA_001624 a0a76e8cca4202e861af73badde5e5a7 620 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 619 45.83 T 13-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 VEA_001624 a0a76e8cca4202e861af73badde5e5a7 620 Pfam PF04545 Sigma-70, region 4 554 607 1.8E-19 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 VEA_001624 a0a76e8cca4202e861af73badde5e5a7 620 Gene3D G3DSA:1.10.10.10 536 620 1.5E-36 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_002211 e7df33fd9558fdabe092875b3e7b0ef0 209 Pfam PF00072 Response regulator receiver domain 7 120 1.2E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_002211 e7df33fd9558fdabe092875b3e7b0ef0 209 Gene3D G3DSA:1.10.10.10 148 209 1.2E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_002211 e7df33fd9558fdabe092875b3e7b0ef0 209 SMART SM00421 147 204 5.0E-23 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_002211 e7df33fd9558fdabe092875b3e7b0ef0 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 3.6E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_002211 e7df33fd9558fdabe092875b3e7b0ef0 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 3.6E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_002211 e7df33fd9558fdabe092875b3e7b0ef0 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 3.6E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_002211 e7df33fd9558fdabe092875b3e7b0ef0 209 SUPERFAMILY SSF52172 4 173 1.43E-27 T 13-10-2018 IPR011006 CheY-like superfamily VEA_002211 e7df33fd9558fdabe092875b3e7b0ef0 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_002211 e7df33fd9558fdabe092875b3e7b0ef0 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 2.8E-20 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_002211 e7df33fd9558fdabe092875b3e7b0ef0 209 SMART SM00448 5 119 1.6E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_002211 e7df33fd9558fdabe092875b3e7b0ef0 209 Gene3D G3DSA:3.40.50.2300 3 132 1.2E-27 T 13-10-2018 VEA_002471 e663fa04e713607dfb95f29e97ecd8a5 345 PIRSF PIRSF000149 1 342 6.9E-129 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002471 e663fa04e713607dfb95f29e97ecd8a5 345 Gene3D G3DSA:3.30.360.10 158 322 9.8E-129 T 13-10-2018 VEA_002471 e663fa04e713607dfb95f29e97ecd8a5 345 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 3 332 9.4E-191 T 13-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 VEA_002471 e663fa04e713607dfb95f29e97ecd8a5 345 SMART SM00846 2 159 5.3E-75 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002471 e663fa04e713607dfb95f29e97ecd8a5 345 SUPERFAMILY SSF55347 159 321 7.74E-59 T 13-10-2018 VEA_002471 e663fa04e713607dfb95f29e97ecd8a5 345 SUPERFAMILY SSF51735 2 183 4.13E-51 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_002471 e663fa04e713607dfb95f29e97ecd8a5 345 Gene3D G3DSA:3.40.50.720 3 332 9.8E-129 T 13-10-2018 VEA_002471 e663fa04e713607dfb95f29e97ecd8a5 345 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 109 3.9E-32 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002471 e663fa04e713607dfb95f29e97ecd8a5 345 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 164 320 1.6E-55 T 13-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002471 e663fa04e713607dfb95f29e97ecd8a5 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 116 129 1.6E-30 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002471 e663fa04e713607dfb95f29e97ecd8a5 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 276 291 1.6E-30 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002471 e663fa04e713607dfb95f29e97ecd8a5 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 153 171 1.6E-30 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002471 e663fa04e713607dfb95f29e97ecd8a5 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 236 253 1.6E-30 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002471 e663fa04e713607dfb95f29e97ecd8a5 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 180 196 1.6E-30 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002471 e663fa04e713607dfb95f29e97ecd8a5 345 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 1 341 66.151 T 13-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 VEA_001954 8ef2b7d0127bbb017a631dc8c6893cf3 451 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 13-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 VEA_001954 8ef2b7d0127bbb017a631dc8c6893cf3 451 PIRSF PIRSF000350 1 445 1.2E-82 T 13-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 VEA_001954 8ef2b7d0127bbb017a631dc8c6893cf3 451 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 319 1.3E-70 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VEA_001954 8ef2b7d0127bbb017a631dc8c6893cf3 451 SUPERFAMILY SSF55424 337 451 4.3E-35 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VEA_001954 8ef2b7d0127bbb017a631dc8c6893cf3 451 Gene3D G3DSA:3.50.50.60 5 315 1.2E-126 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_001954 8ef2b7d0127bbb017a631dc8c6893cf3 451 Gene3D G3DSA:3.30.390.30 339 451 2.2E-47 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VEA_001954 8ef2b7d0127bbb017a631dc8c6893cf3 451 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 340 450 7.3E-33 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VEA_001954 8ef2b7d0127bbb017a631dc8c6893cf3 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 7.6E-64 T 13-10-2018 VEA_001954 8ef2b7d0127bbb017a631dc8c6893cf3 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 7.6E-64 T 13-10-2018 VEA_001954 8ef2b7d0127bbb017a631dc8c6893cf3 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 7.6E-64 T 13-10-2018 VEA_001954 8ef2b7d0127bbb017a631dc8c6893cf3 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 336 357 7.6E-64 T 13-10-2018 VEA_001954 8ef2b7d0127bbb017a631dc8c6893cf3 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 425 445 7.6E-64 T 13-10-2018 VEA_001954 8ef2b7d0127bbb017a631dc8c6893cf3 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 7.6E-64 T 13-10-2018 VEA_001954 8ef2b7d0127bbb017a631dc8c6893cf3 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 7.6E-64 T 13-10-2018 VEA_001954 8ef2b7d0127bbb017a631dc8c6893cf3 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 403 418 7.6E-64 T 13-10-2018 VEA_001954 8ef2b7d0127bbb017a631dc8c6893cf3 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 7.6E-64 T 13-10-2018 VEA_001954 8ef2b7d0127bbb017a631dc8c6893cf3 451 Gene3D G3DSA:3.50.50.60 144 261 1.2E-126 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_001954 8ef2b7d0127bbb017a631dc8c6893cf3 451 SUPERFAMILY SSF51905 1 365 1.73E-58 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_001954 8ef2b7d0127bbb017a631dc8c6893cf3 451 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 4 451 2.5E-215 T 13-10-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 VEA_001954 8ef2b7d0127bbb017a631dc8c6893cf3 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 5.1E-29 T 13-10-2018 VEA_001954 8ef2b7d0127bbb017a631dc8c6893cf3 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 5.1E-29 T 13-10-2018 VEA_001954 8ef2b7d0127bbb017a631dc8c6893cf3 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 5.1E-29 T 13-10-2018 VEA_001954 8ef2b7d0127bbb017a631dc8c6893cf3 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 5.1E-29 T 13-10-2018 VEA_001954 8ef2b7d0127bbb017a631dc8c6893cf3 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 5.1E-29 T 13-10-2018 VEA_002058 20fc87c24a846593aa71d23ca0eab6a4 364 Pfam PF01476 LysM domain 40 85 1.2E-12 T 13-10-2018 IPR018392 LysM domain VEA_002058 20fc87c24a846593aa71d23ca0eab6a4 364 Gene3D G3DSA:3.10.350.10 38 85 1.8E-14 T 13-10-2018 IPR036779 LysM domain superfamily VEA_002058 20fc87c24a846593aa71d23ca0eab6a4 364 SMART SM00257 39 87 2.0E-4 T 13-10-2018 IPR018392 LysM domain VEA_002058 20fc87c24a846593aa71d23ca0eab6a4 364 SUPERFAMILY SSF54106 38 86 8.24E-7 T 13-10-2018 VEA_002921 ce7d783721a736d4dc8dc119640f5d04 307 PRINTS PR01270 Histone deacetylase superfamily signature 155 170 4.5E-17 T 13-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VEA_002921 ce7d783721a736d4dc8dc119640f5d04 307 PRINTS PR01270 Histone deacetylase superfamily signature 229 239 4.5E-17 T 13-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VEA_002921 ce7d783721a736d4dc8dc119640f5d04 307 PRINTS PR01270 Histone deacetylase superfamily signature 121 144 4.5E-17 T 13-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VEA_002921 ce7d783721a736d4dc8dc119640f5d04 307 Pfam PF00850 Histone deacetylase domain 41 286 4.3E-52 T 13-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VEA_002921 ce7d783721a736d4dc8dc119640f5d04 307 Gene3D G3DSA:3.40.800.20 2 302 6.2E-69 T 13-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VEA_002921 ce7d783721a736d4dc8dc119640f5d04 307 SUPERFAMILY SSF52768 3 286 1.68E-81 T 13-10-2018 IPR023696 Ureohydrolase domain superfamily VEA_004402 41ee39a091fadcbadff9a230f98da04a 555 Pfam PF00005 ABC transporter 340 473 4.2E-25 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_004402 41ee39a091fadcbadff9a230f98da04a 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 3 553 1.7E-293 T 13-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 VEA_004402 41ee39a091fadcbadff9a230f98da04a 555 SMART SM00382 31 236 6.9E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_004402 41ee39a091fadcbadff9a230f98da04a 555 SMART SM00382 348 518 1.2E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_004402 41ee39a091fadcbadff9a230f98da04a 555 Gene3D G3DSA:3.40.50.300 1 285 4.5E-86 T 13-10-2018 VEA_004402 41ee39a091fadcbadff9a230f98da04a 555 SUPERFAMILY SSF52540 9 242 4.85E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_004402 41ee39a091fadcbadff9a230f98da04a 555 Gene3D G3DSA:3.40.50.300 286 555 2.9E-77 T 13-10-2018 VEA_004402 41ee39a091fadcbadff9a230f98da04a 555 Pfam PF00005 ABC transporter 22 191 2.3E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_004402 41ee39a091fadcbadff9a230f98da04a 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_004402 41ee39a091fadcbadff9a230f98da04a 555 Pfam PF12848 ABC transporter 230 306 4.1E-13 T 13-10-2018 IPR032781 ABC-transporter extension domain VEA_004402 41ee39a091fadcbadff9a230f98da04a 555 SUPERFAMILY SSF52540 304 525 3.68E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002362 c8537372c10f0b2622da61b25666d66f 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 208 5.3E-18 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_002362 c8537372c10f0b2622da61b25666d66f 214 Gene3D G3DSA:3.40.50.2300 12 142 1.2E-24 T 13-10-2018 VEA_002362 c8537372c10f0b2622da61b25666d66f 214 SUPERFAMILY SSF46894 141 210 1.94E-18 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEA_002362 c8537372c10f0b2622da61b25666d66f 214 SMART SM00421 151 208 2.1E-20 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_002362 c8537372c10f0b2622da61b25666d66f 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 4.7E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_002362 c8537372c10f0b2622da61b25666d66f 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 4.7E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_002362 c8537372c10f0b2622da61b25666d66f 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 4.7E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_002362 c8537372c10f0b2622da61b25666d66f 214 Gene3D G3DSA:1.10.10.10 144 214 1.4E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000835 55ca663f0c2d92d672ab2fecbe7ca23c 242 Pfam PF00005 ABC transporter 21 164 1.7E-24 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_000835 55ca663f0c2d92d672ab2fecbe7ca23c 242 SUPERFAMILY SSF52540 4 225 7.6E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000835 55ca663f0c2d92d672ab2fecbe7ca23c 242 Gene3D G3DSA:3.40.50.300 4 241 1.1E-51 T 13-10-2018 VEA_000835 55ca663f0c2d92d672ab2fecbe7ca23c 242 SMART SM00382 30 212 5.4E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_000835 55ca663f0c2d92d672ab2fecbe7ca23c 242 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_001263 388ad315bd57e97a25760b81fbdd7171 310 SUPERFAMILY SSF161098 34 305 9.68E-36 T 13-10-2018 IPR035906 MetI-like superfamily VEA_001263 388ad315bd57e97a25760b81fbdd7171 310 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 33 307 2.7E-91 T 13-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 VEA_001263 388ad315bd57e97a25760b81fbdd7171 310 Gene3D G3DSA:1.10.3720.10 84 309 6.4E-33 T 13-10-2018 IPR035906 MetI-like superfamily VEA_001263 388ad315bd57e97a25760b81fbdd7171 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 306 2.4E-23 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_003992 16c13844d43783fcd7464b51f6920408 374 Pfam PF02687 FtsX-like permease family 268 367 1.9E-11 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VEA_003992 16c13844d43783fcd7464b51f6920408 374 Pfam PF12704 MacB-like periplasmic core domain 2 181 2.9E-13 T 13-10-2018 IPR025857 MacB-like periplasmic core domain VEA_003992 16c13844d43783fcd7464b51f6920408 374 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 1 374 3.1E-123 T 13-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 VEA_000313 fc99d0f30c92ed9e5857aa2cc3a4b6aa 515 Pfam PF14707 C-terminal region of aryl-sulfatase 396 470 6.4E-8 T 13-10-2018 VEA_000313 fc99d0f30c92ed9e5857aa2cc3a4b6aa 515 Pfam PF00884 Sulfatase 31 356 3.4E-61 T 13-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VEA_000313 fc99d0f30c92ed9e5857aa2cc3a4b6aa 515 SUPERFAMILY SSF53649 27 507 1.89E-126 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VEA_000313 fc99d0f30c92ed9e5857aa2cc3a4b6aa 515 Gene3D G3DSA:3.30.1120.10 398 463 5.8E-101 T 13-10-2018 VEA_000313 fc99d0f30c92ed9e5857aa2cc3a4b6aa 515 Gene3D G3DSA:3.40.720.10 31 397 5.8E-101 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VEA_000765 630ef7bb3797e25057d78362b688b9ab 368 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_000765 630ef7bb3797e25057d78362b688b9ab 368 Gene3D G3DSA:2.40.50.940 226 355 1.3E-16 T 13-10-2018 VEA_000765 630ef7bb3797e25057d78362b688b9ab 368 Pfam PF08402 TOBE domain 279 354 1.2E-4 T 13-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VEA_000765 630ef7bb3797e25057d78362b688b9ab 368 Pfam PF00005 ABC transporter 23 165 1.8E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_000765 630ef7bb3797e25057d78362b688b9ab 368 SUPERFAMILY SSF50331 240 357 6.46E-12 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VEA_000765 630ef7bb3797e25057d78362b688b9ab 368 SUPERFAMILY SSF52540 8 247 4.92E-86 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000765 630ef7bb3797e25057d78362b688b9ab 368 Gene3D G3DSA:3.40.50.300 7 225 8.6E-69 T 13-10-2018 VEA_000765 630ef7bb3797e25057d78362b688b9ab 368 SMART SM00382 32 215 1.8E-20 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_000765 630ef7bb3797e25057d78362b688b9ab 368 Gene3D G3DSA:2.40.50.140 286 349 1.3E-16 T 13-10-2018 VEA_000765 630ef7bb3797e25057d78362b688b9ab 368 TIGRFAM TIGR03265 PhnT2: putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein 5 358 3.4E-163 T 13-10-2018 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 GO:0005524 VEA_004165 c1defd136ed2e87c8ff4ee45efb578bb 307 PRINTS PR01002 Flagellar protein FlgJ signature 78 100 1.1E-29 T 13-10-2018 VEA_004165 c1defd136ed2e87c8ff4ee45efb578bb 307 PRINTS PR01002 Flagellar protein FlgJ signature 222 243 1.1E-29 T 13-10-2018 VEA_004165 c1defd136ed2e87c8ff4ee45efb578bb 307 PRINTS PR01002 Flagellar protein FlgJ signature 181 199 1.1E-29 T 13-10-2018 VEA_004165 c1defd136ed2e87c8ff4ee45efb578bb 307 PRINTS PR01002 Flagellar protein FlgJ signature 30 53 1.1E-29 T 13-10-2018 VEA_004165 c1defd136ed2e87c8ff4ee45efb578bb 307 PRINTS PR01002 Flagellar protein FlgJ signature 287 305 1.1E-29 T 13-10-2018 VEA_004165 c1defd136ed2e87c8ff4ee45efb578bb 307 PRINTS PR01002 Flagellar protein FlgJ signature 244 265 1.1E-29 T 13-10-2018 VEA_004165 c1defd136ed2e87c8ff4ee45efb578bb 307 Pfam PF10135 Rod binding protein 52 101 3.0E-15 T 13-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal VEA_004165 c1defd136ed2e87c8ff4ee45efb578bb 307 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 168 304 6.6E-21 T 13-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 VEA_004165 c1defd136ed2e87c8ff4ee45efb578bb 307 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 9 304 3.3E-127 T 13-10-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 VEA_004165 c1defd136ed2e87c8ff4ee45efb578bb 307 Gene3D G3DSA:1.10.530.10 159 305 2.7E-45 T 13-10-2018 VEA_004165 c1defd136ed2e87c8ff4ee45efb578bb 307 SMART SM00047 147 306 2.3E-47 T 13-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 VEA_002512 ece0e5368b3f2087f8645b16773a6c42 347 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 186 337 6.9E-23 T 13-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEA_002512 ece0e5368b3f2087f8645b16773a6c42 347 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 9 170 1.9E-42 T 13-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEA_002512 ece0e5368b3f2087f8645b16773a6c42 347 Gene3D G3DSA:3.30.2350.20 18 337 4.5E-107 T 13-10-2018 VEA_002512 ece0e5368b3f2087f8645b16773a6c42 347 SUPERFAMILY SSF55120 6 339 3.16E-98 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEA_002512 ece0e5368b3f2087f8645b16773a6c42 347 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 6 342 28.881 T 13-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEA_002512 ece0e5368b3f2087f8645b16773a6c42 347 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 78 91 - T 13-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 VEA_002512 ece0e5368b3f2087f8645b16773a6c42 347 Gene3D G3DSA:3.30.2340.10 170 302 4.5E-107 T 13-10-2018 VEA_004010 9cfe4f340e75829835357f9d3ef695d5 667 Gene3D G3DSA:3.40.190.10 40 115 6.2E-12 T 13-10-2018 VEA_004010 9cfe4f340e75829835357f9d3ef695d5 667 SUPERFAMILY SSF53850 251 469 4.35E-23 T 13-10-2018 VEA_004010 9cfe4f340e75829835357f9d3ef695d5 667 SUPERFAMILY SSF55073 516 656 4.0E-26 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_004010 9cfe4f340e75829835357f9d3ef695d5 667 Gene3D G3DSA:3.30.70.270 504 658 4.9E-31 T 13-10-2018 VEA_004010 9cfe4f340e75829835357f9d3ef695d5 667 Gene3D G3DSA:3.40.190.10 116 180 1.5E-6 T 13-10-2018 VEA_004010 9cfe4f340e75829835357f9d3ef695d5 667 Pfam PF00990 Diguanylate cyclase, GGDEF domain 512 655 6.6E-27 T 13-10-2018 IPR000160 GGDEF domain VEA_004010 9cfe4f340e75829835357f9d3ef695d5 667 SMART SM00267 500 661 1.5E-20 T 13-10-2018 IPR000160 GGDEF domain VEA_004010 9cfe4f340e75829835357f9d3ef695d5 667 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 258 468 2.0E-17 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEA_004010 9cfe4f340e75829835357f9d3ef695d5 667 Gene3D G3DSA:3.40.190.10 258 464 5.7E-18 T 13-10-2018 VEA_004010 9cfe4f340e75829835357f9d3ef695d5 667 SUPERFAMILY SSF53850 44 212 1.17E-26 T 13-10-2018 VEA_004010 9cfe4f340e75829835357f9d3ef695d5 667 Gene3D G3DSA:3.40.190.10 334 439 5.7E-18 T 13-10-2018 VEA_004010 9cfe4f340e75829835357f9d3ef695d5 667 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 196 5.0E-19 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEA_004010 9cfe4f340e75829835357f9d3ef695d5 667 SMART SM00062 29 227 9.7E-10 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEA_004010 9cfe4f340e75829835357f9d3ef695d5 667 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 509 655 3.4E-29 T 13-10-2018 IPR000160 GGDEF domain VEA_001898 50df5f62408aa69e7ef08bd48de70a44 305 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 164 296 4.4E-46 T 13-10-2018 IPR012660 Thioesterase, putative VEA_001898 50df5f62408aa69e7ef08bd48de70a44 305 Gene3D G3DSA:3.40.630.30 3 145 9.1E-28 T 13-10-2018 VEA_001898 50df5f62408aa69e7ef08bd48de70a44 305 SUPERFAMILY SSF55729 2 159 2.66E-29 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_001898 50df5f62408aa69e7ef08bd48de70a44 305 SUPERFAMILY SSF54637 154 296 3.17E-41 T 13-10-2018 IPR029069 HotDog domain superfamily VEA_001898 50df5f62408aa69e7ef08bd48de70a44 305 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 157 296 1.6E-53 T 13-10-2018 IPR012660 Thioesterase, putative VEA_001898 50df5f62408aa69e7ef08bd48de70a44 305 Gene3D G3DSA:3.10.129.10 147 298 3.6E-48 T 13-10-2018 VEA_001898 50df5f62408aa69e7ef08bd48de70a44 305 Pfam PF13673 Acetyltransferase (GNAT) domain 48 142 2.4E-11 T 13-10-2018 IPR000182 GNAT domain VEA_003583 d51e7e96a79911f11979042f00bd3d04 567 SUPERFAMILY SSF55073 153 306 1.88E-19 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_003583 d51e7e96a79911f11979042f00bd3d04 567 Gene3D G3DSA:3.30.70.270 145 316 1.2E-21 T 13-10-2018 VEA_003583 d51e7e96a79911f11979042f00bd3d04 567 SUPERFAMILY SSF55785 27 137 1.45E-17 T 13-10-2018 IPR035965 PAS domain superfamily VEA_003583 d51e7e96a79911f11979042f00bd3d04 567 SMART SM00091 22 88 0.0036 T 13-10-2018 IPR000014 PAS domain VEA_003583 d51e7e96a79911f11979042f00bd3d04 567 Gene3D G3DSA:3.30.450.20 17 131 1.1E-17 T 13-10-2018 VEA_003583 d51e7e96a79911f11979042f00bd3d04 567 Pfam PF00990 Diguanylate cyclase, GGDEF domain 146 299 1.6E-14 T 13-10-2018 IPR000160 GGDEF domain VEA_003583 d51e7e96a79911f11979042f00bd3d04 567 Pfam PF08447 PAS fold 45 115 4.1E-12 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 VEA_003583 d51e7e96a79911f11979042f00bd3d04 567 SMART SM00086 95 135 0.0015 T 13-10-2018 IPR001610 PAC motif VEA_003583 d51e7e96a79911f11979042f00bd3d04 567 SMART SM00052 314 560 1.1E-68 T 13-10-2018 IPR001633 EAL domain VEA_003583 d51e7e96a79911f11979042f00bd3d04 567 SMART SM00267 135 304 2.1E-8 T 13-10-2018 IPR000160 GGDEF domain VEA_003583 d51e7e96a79911f11979042f00bd3d04 567 SUPERFAMILY SSF141868 319 562 2.75E-73 T 13-10-2018 IPR035919 EAL domain superfamily VEA_003583 d51e7e96a79911f11979042f00bd3d04 567 Gene3D G3DSA:3.20.20.450 317 565 2.2E-79 T 13-10-2018 IPR035919 EAL domain superfamily VEA_003583 d51e7e96a79911f11979042f00bd3d04 567 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 21 139 2.1E-13 T 13-10-2018 IPR000014 PAS domain VEA_003583 d51e7e96a79911f11979042f00bd3d04 567 Pfam PF00563 EAL domain 322 555 1.1E-64 T 13-10-2018 IPR001633 EAL domain VEA_000230 cae2ab42ac29bc143a8b85ce554a98fe 372 Gene3D G3DSA:4.10.1250.10 233 281 4.6E-20 T 13-10-2018 VEA_000230 cae2ab42ac29bc143a8b85ce554a98fe 372 Gene3D G3DSA:3.30.1360.120 7 231 7.8E-84 T 13-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 VEA_000230 cae2ab42ac29bc143a8b85ce554a98fe 372 SUPERFAMILY SSF101790 279 371 1.52E-25 T 13-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal VEA_000230 cae2ab42ac29bc143a8b85ce554a98fe 372 Gene3D G3DSA:3.30.70.1400 56 140 7.8E-84 T 13-10-2018 VEA_000230 cae2ab42ac29bc143a8b85ce554a98fe 372 Gene3D G3DSA:2.40.30.110 284 361 5.4E-28 T 13-10-2018 VEA_000230 cae2ab42ac29bc143a8b85ce554a98fe 372 SUPERFAMILY SSF103025 4 281 3.77E-89 T 13-10-2018 VEA_000230 cae2ab42ac29bc143a8b85ce554a98fe 372 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 268 362 2.9E-22 T 13-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 VEA_000230 cae2ab42ac29bc143a8b85ce554a98fe 372 PIRSF PIRSF006487 1 372 1.1E-79 T 13-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 VEA_000230 cae2ab42ac29bc143a8b85ce554a98fe 372 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 6 366 7.9E-106 T 13-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 VEA_000230 cae2ab42ac29bc143a8b85ce554a98fe 372 Pfam PF01571 Aminomethyltransferase folate-binding domain 10 254 2.3E-87 T 13-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain VEA_000025 6efdfda09ed7e75d66e96d4bfc59c57c 607 PIRSF PIRSF028304 1 606 2.7E-152 T 13-10-2018 IPR010272 Type VI secretion system, TssF-like VEA_000025 6efdfda09ed7e75d66e96d4bfc59c57c 607 Pfam PF05947 Type VI secretion system, TssF 6 605 5.1E-178 T 13-10-2018 IPR010272 Type VI secretion system, TssF-like VEA_000025 6efdfda09ed7e75d66e96d4bfc59c57c 607 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 607 2.6E-196 T 13-10-2018 IPR010272 Type VI secretion system, TssF-like VEA_004282 e613e7a7d774b5781a9bc7dba1707193 182 Gene3D G3DSA:3.40.140.10 5 169 3.4E-63 T 13-10-2018 VEA_004282 e613e7a7d774b5781a9bc7dba1707193 182 SUPERFAMILY SSF53927 5 159 6.86E-56 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VEA_004282 e613e7a7d774b5781a9bc7dba1707193 182 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 59 96 - T 13-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VEA_004282 e613e7a7d774b5781a9bc7dba1707193 182 Pfam PF14437 MafB19-like deaminase 11 155 1.2E-32 T 13-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 VEA_004282 e613e7a7d774b5781a9bc7dba1707193 182 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 14 155 45.065 T 13-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 VEA_003320 0fb2f196b4a865eee317cba356176650 228 PIRSF PIRSF006171 3 228 4.7E-80 T 13-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 VEA_003320 0fb2f196b4a865eee317cba356176650 228 SMART SM00448 5 118 6.0E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_003320 0fb2f196b4a865eee317cba356176650 228 Pfam PF12431 Transcriptional regulator 134 162 1.8E-6 T 13-10-2018 IPR028141 Transcriptional regulator VEA_003320 0fb2f196b4a865eee317cba356176650 228 Pfam PF00072 Response regulator receiver domain 7 118 1.3E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_003320 0fb2f196b4a865eee317cba356176650 228 Gene3D G3DSA:3.40.50.2300 3 151 9.8E-27 T 13-10-2018 VEA_003320 0fb2f196b4a865eee317cba356176650 228 SUPERFAMILY SSF52172 6 137 4.13E-31 T 13-10-2018 IPR011006 CheY-like superfamily VEA_000494 5ba8e711be01d49c5d25ccfee872472d 316 TIGRFAM TIGR00874 talAB: transaldolase 3 316 8.6E-155 T 13-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VEA_000494 5ba8e711be01d49c5d25ccfee872472d 316 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 13-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VEA_000494 5ba8e711be01d49c5d25ccfee872472d 316 Hamap MF_00492 Transaldolase [tal]. 2 316 50.955 T 13-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VEA_000494 5ba8e711be01d49c5d25ccfee872472d 316 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 312 2.5E-101 T 13-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VEA_000494 5ba8e711be01d49c5d25ccfee872472d 316 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 13-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VEA_000494 5ba8e711be01d49c5d25ccfee872472d 316 SUPERFAMILY SSF51569 1 315 3.45E-114 T 13-10-2018 VEA_000494 5ba8e711be01d49c5d25ccfee872472d 316 Gene3D G3DSA:3.20.20.70 2 316 1.1E-138 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_002999 3bf2f85e1878582dcabe2f91597b9b3e 271 Gene3D G3DSA:3.20.10.10 112 271 4.0E-51 T 13-10-2018 VEA_002999 3bf2f85e1878582dcabe2f91597b9b3e 271 Gene3D G3DSA:3.30.470.10 1 106 4.2E-24 T 13-10-2018 VEA_002999 3bf2f85e1878582dcabe2f91597b9b3e 271 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 13-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 VEA_002999 3bf2f85e1878582dcabe2f91597b9b3e 271 Pfam PF01063 Amino-transferase class IV 26 247 2.7E-46 T 13-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 VEA_002999 3bf2f85e1878582dcabe2f91597b9b3e 271 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 266 2.3E-102 T 13-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 VEA_002999 3bf2f85e1878582dcabe2f91597b9b3e 271 SUPERFAMILY SSF56752 1 266 6.41E-67 T 13-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 VEA_000852 65e59965aeaaf4e200ae36f6487df208 317 SUPERFAMILY SSF51735 1 141 4.18E-35 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_000852 65e59965aeaaf4e200ae36f6487df208 317 Gene3D G3DSA:3.40.50.720 1 144 2.2E-38 T 13-10-2018 VEA_000852 65e59965aeaaf4e200ae36f6487df208 317 PRINTS PR00086 L-lactate dehydrogenase signature 116 136 7.4E-20 T 13-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VEA_000852 65e59965aeaaf4e200ae36f6487df208 317 PRINTS PR00086 L-lactate dehydrogenase signature 2 26 7.4E-20 T 13-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VEA_000852 65e59965aeaaf4e200ae36f6487df208 317 PRINTS PR00086 L-lactate dehydrogenase signature 140 158 7.4E-20 T 13-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VEA_000852 65e59965aeaaf4e200ae36f6487df208 317 PRINTS PR00086 L-lactate dehydrogenase signature 27 51 7.4E-20 T 13-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VEA_000852 65e59965aeaaf4e200ae36f6487df208 317 PRINTS PR00086 L-lactate dehydrogenase signature 170 183 7.4E-20 T 13-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VEA_000852 65e59965aeaaf4e200ae36f6487df208 317 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 141 1.2E-30 T 13-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 VEA_000852 65e59965aeaaf4e200ae36f6487df208 317 SUPERFAMILY SSF56327 143 309 3.6E-40 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VEA_000852 65e59965aeaaf4e200ae36f6487df208 317 PIRSF PIRSF000102 1 316 3.9E-85 T 13-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VEA_000852 65e59965aeaaf4e200ae36f6487df208 317 Gene3D G3DSA:3.90.110.10 145 315 3.8E-43 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VEA_000852 65e59965aeaaf4e200ae36f6487df208 317 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 311 6.1E-22 T 13-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 VEA_004070 abc0bd2bc727cd327d49d87f03643298 517 Pfam PF00221 Aromatic amino acid lyase 16 469 1.0E-163 T 13-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 VEA_004070 abc0bd2bc727cd327d49d87f03643298 517 Gene3D G3DSA:1.10.275.10 9 203 1.1E-57 T 13-10-2018 IPR024083 Fumarase/histidase, N-terminal VEA_004070 abc0bd2bc727cd327d49d87f03643298 517 SUPERFAMILY SSF48557 5 513 3.37E-172 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 VEA_004070 abc0bd2bc727cd327d49d87f03643298 517 Gene3D G3DSA:1.20.200.10 204 511 3.0E-101 T 13-10-2018 VEA_004070 abc0bd2bc727cd327d49d87f03643298 517 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 145 161 - T 13-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 VEA_003633 4317827eb61a6c0739bdd19651203bdb 313 SUPERFAMILY SSF52317 18 297 6.25E-101 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VEA_003633 4317827eb61a6c0739bdd19651203bdb 313 Gene3D G3DSA:3.40.50.880 1 301 3.1E-124 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VEA_003633 4317827eb61a6c0739bdd19651203bdb 313 PIRSF PIRSF000450 1 309 7.3E-148 T 13-10-2018 IPR033752 MetA family VEA_003633 4317827eb61a6c0739bdd19651203bdb 313 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 1.0E-127 T 13-10-2018 VEA_003633 4317827eb61a6c0739bdd19651203bdb 313 Pfam PF04204 Homoserine O-succinyltransferase 2 299 3.2E-135 T 13-10-2018 IPR033752 MetA family VEA_003633 4317827eb61a6c0739bdd19651203bdb 313 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 301 7.1E-161 T 13-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 VEA_003633 4317827eb61a6c0739bdd19651203bdb 313 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 40.906 T 13-10-2018 IPR033752 MetA family VEA_000552 c1783ee59bf59b0ed6ad9738d7eddf1d 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 5.2E-11 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEA_000552 c1783ee59bf59b0ed6ad9738d7eddf1d 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 5.2E-11 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEA_000552 c1783ee59bf59b0ed6ad9738d7eddf1d 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 5.2E-11 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEA_000552 c1783ee59bf59b0ed6ad9738d7eddf1d 151 SMART SM00344 1 110 3.8E-17 T 13-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VEA_000552 c1783ee59bf59b0ed6ad9738d7eddf1d 151 SUPERFAMILY SSF46785 1 55 1.76E-13 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000552 c1783ee59bf59b0ed6ad9738d7eddf1d 151 SUPERFAMILY SSF54909 62 145 1.01E-13 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel VEA_000552 c1783ee59bf59b0ed6ad9738d7eddf1d 151 Pfam PF01037 Lrp/AsnC ligand binding domain 77 139 3.2E-11 T 13-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VEA_000552 c1783ee59bf59b0ed6ad9738d7eddf1d 151 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 1.4E-15 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEA_000552 c1783ee59bf59b0ed6ad9738d7eddf1d 151 Gene3D G3DSA:1.10.10.10 1 52 1.6E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000552 c1783ee59bf59b0ed6ad9738d7eddf1d 151 Gene3D G3DSA:3.30.70.920 56 148 1.6E-13 T 13-10-2018 VEA_003151 1614b426d0e4966156a391d0040950e4 541 SUPERFAMILY SSF58104 224 533 1.27E-61 T 13-10-2018 VEA_003151 1614b426d0e4966156a391d0040950e4 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 495 1.1E-39 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_003151 1614b426d0e4966156a391d0040950e4 541 SMART SM00304 203 256 9.2E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_003151 1614b426d0e4966156a391d0040950e4 541 Gene3D G3DSA:1.10.287.950 203 534 4.2E-64 T 13-10-2018 VEA_003151 1614b426d0e4966156a391d0040950e4 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 369 396 1.6E-22 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEA_003151 1614b426d0e4966156a391d0040950e4 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 20 1.6E-22 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEA_003151 1614b426d0e4966156a391d0040950e4 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 398 427 1.6E-22 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEA_003151 1614b426d0e4966156a391d0040950e4 541 SMART SM00283 271 532 1.0E-48 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_002995 f9d5aa9dd2f87d17654c37133be42c8a 307 SUPERFAMILY SSF52151 4 305 2.17E-82 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VEA_002995 f9d5aa9dd2f87d17654c37133be42c8a 307 PIRSF PIRSF000446 1 307 3.2E-135 T 13-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 VEA_002995 f9d5aa9dd2f87d17654c37133be42c8a 307 Gene3D G3DSA:3.40.366.10 5 286 3.9E-107 T 13-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 VEA_002995 f9d5aa9dd2f87d17654c37133be42c8a 307 Pfam PF00698 Acyl transferase domain 7 291 3.1E-38 T 13-10-2018 IPR014043 Acyl transferase VEA_002995 f9d5aa9dd2f87d17654c37133be42c8a 307 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 1.2E-125 T 13-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 VEA_002995 f9d5aa9dd2f87d17654c37133be42c8a 307 SUPERFAMILY SSF55048 128 197 6.15E-18 T 13-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding VEA_002995 f9d5aa9dd2f87d17654c37133be42c8a 307 Gene3D G3DSA:3.30.70.250 125 197 3.9E-107 T 13-10-2018 VEA_002995 f9d5aa9dd2f87d17654c37133be42c8a 307 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 307 4.9E-44 T 13-10-2018 IPR020801 Polyketide synthase, acyl transferase domain VEA_002330 90746f462acee649235e619ef9d13495 279 Gene3D G3DSA:1.10.1020.10 57 156 2.5E-83 T 13-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 VEA_002330 90746f462acee649235e619ef9d13495 279 Gene3D G3DSA:3.40.50.150 7 239 2.5E-83 T 13-10-2018 VEA_002330 90746f462acee649235e619ef9d13495 279 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 252 4.6E-68 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VEA_002330 90746f462acee649235e619ef9d13495 279 PIRSF PIRSF000398 1 274 1.6E-73 T 13-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 VEA_002330 90746f462acee649235e619ef9d13495 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 3.9E-18 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VEA_002330 90746f462acee649235e619ef9d13495 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 3.9E-18 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VEA_002330 90746f462acee649235e619ef9d13495 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 3.9E-18 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VEA_002330 90746f462acee649235e619ef9d13495 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 3.9E-18 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VEA_002330 90746f462acee649235e619ef9d13495 279 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VEA_002330 90746f462acee649235e619ef9d13495 279 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 268 8.2E-95 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VEA_002330 90746f462acee649235e619ef9d13495 279 SUPERFAMILY SSF53335 5 268 6.65E-76 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_001889 a83b53dac8b817a04ab001a8f8463005 147 Gene3D G3DSA:3.30.700.10 33 141 3.1E-44 T 13-10-2018 VEA_001889 a83b53dac8b817a04ab001a8f8463005 147 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 31 8.2E-10 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEA_001889 a83b53dac8b817a04ab001a8f8463005 147 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEA_001889 a83b53dac8b817a04ab001a8f8463005 147 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 30 2.7E-10 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEA_001889 a83b53dac8b817a04ab001a8f8463005 147 Pfam PF08334 Type II secretion system (T2SS), protein G 33 141 1.3E-42 T 13-10-2018 IPR013545 Type II secretion system protein G VEA_001889 a83b53dac8b817a04ab001a8f8463005 147 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 9 142 1.6E-57 T 13-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 VEA_001889 a83b53dac8b817a04ab001a8f8463005 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 46 64 4.2E-22 T 13-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 VEA_001889 a83b53dac8b817a04ab001a8f8463005 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 10 35 4.2E-22 T 13-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 VEA_001889 a83b53dac8b817a04ab001a8f8463005 147 SUPERFAMILY SSF54523 36 142 2.67E-38 T 13-10-2018 VEA_002938 80a79624945bd5bf7c84f94aba1a0902 214 SUPERFAMILY SSF53098 10 208 4.91E-57 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VEA_002938 80a79624945bd5bf7c84f94aba1a0902 214 Pfam PF00929 Exonuclease 20 195 7.7E-46 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VEA_002938 80a79624945bd5bf7c84f94aba1a0902 214 Gene3D G3DSA:3.30.420.10 9 214 8.0E-54 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VEA_002938 80a79624945bd5bf7c84f94aba1a0902 214 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 209 9.1E-101 T 13-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 VEA_002938 80a79624945bd5bf7c84f94aba1a0902 214 SMART SM00479 18 204 7.5E-31 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VEA_002938 80a79624945bd5bf7c84f94aba1a0902 214 Hamap MF_00157 Ribonuclease T [rnt]. 1 214 115.834 T 13-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 VEA_004374 8c4641eda80f5693cf2116e137c84833 203 SUPERFAMILY SSF52833 1 194 5.48E-66 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VEA_004374 8c4641eda80f5693cf2116e137c84833 203 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 193 3.0E-8 T 13-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VEA_004374 8c4641eda80f5693cf2116e137c84833 203 Gene3D G3DSA:3.40.30.10 1 197 4.3E-72 T 13-10-2018 VEA_004374 8c4641eda80f5693cf2116e137c84833 203 Pfam PF00578 AhpC/TSA family 4 139 8.0E-34 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VEA_004374 8c4641eda80f5693cf2116e137c84833 203 PIRSF PIRSF000239 1 201 2.1E-58 T 13-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VEA_001409 c7a864e46b3b72afa4ce57d8d15a9e26 351 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 13 342 9.0E-137 T 13-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 VEA_001409 c7a864e46b3b72afa4ce57d8d15a9e26 351 Gene3D G3DSA:1.20.1530.20 3 342 1.3E-22 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily VEA_001409 c7a864e46b3b72afa4ce57d8d15a9e26 351 Pfam PF01758 Sodium Bile acid symporter family 58 254 1.9E-61 T 13-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 VEA_001409 c7a864e46b3b72afa4ce57d8d15a9e26 351 PIRSF PIRSF005508 1 351 1.0E-135 T 13-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 VEA_001460 935879ca6c9509ff681b081565f083a5 69 PIRSF PIRSF002599 1 69 2.4E-24 T 13-10-2018 IPR012156 Cold shock, CspA GO:0003676 VEA_001460 935879ca6c9509ff681b081565f083a5 69 Pfam PF00313 'Cold-shock' DNA-binding domain 6 67 2.3E-28 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEA_001460 935879ca6c9509ff681b081565f083a5 69 SUPERFAMILY SSF50249 4 68 7.07E-24 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_001460 935879ca6c9509ff681b081565f083a5 69 PRINTS PR00050 Cold shock protein signature 7 22 5.4E-17 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEA_001460 935879ca6c9509ff681b081565f083a5 69 PRINTS PR00050 Cold shock protein signature 27 36 5.4E-17 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEA_001460 935879ca6c9509ff681b081565f083a5 69 PRINTS PR00050 Cold shock protein signature 42 60 5.4E-17 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEA_001460 935879ca6c9509ff681b081565f083a5 69 Gene3D G3DSA:2.40.50.140 4 68 3.0E-28 T 13-10-2018 VEA_001460 935879ca6c9509ff681b081565f083a5 69 SMART SM00357 6 69 4.2E-30 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 VEA_001460 935879ca6c9509ff681b081565f083a5 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 13-10-2018 IPR019844 Cold-shock conserved site VEA_003762 71d047e8aa4bb4faed43c9ea9c23ecfd 88 PRINTS PR00160 Glutaredoxin signature 3 21 4.5E-11 T 13-10-2018 IPR014025 Glutaredoxin subgroup VEA_003762 71d047e8aa4bb4faed43c9ea9c23ecfd 88 PRINTS PR00160 Glutaredoxin signature 66 79 4.5E-11 T 13-10-2018 IPR014025 Glutaredoxin subgroup VEA_003762 71d047e8aa4bb4faed43c9ea9c23ecfd 88 PRINTS PR00160 Glutaredoxin signature 52 65 4.5E-11 T 13-10-2018 IPR014025 Glutaredoxin subgroup VEA_003762 71d047e8aa4bb4faed43c9ea9c23ecfd 88 Gene3D G3DSA:3.40.30.10 1 84 7.2E-25 T 13-10-2018 VEA_003762 71d047e8aa4bb4faed43c9ea9c23ecfd 88 SUPERFAMILY SSF52833 3 81 5.39E-21 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VEA_003762 71d047e8aa4bb4faed43c9ea9c23ecfd 88 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 85 2.5E-46 T 13-10-2018 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 VEA_003762 71d047e8aa4bb4faed43c9ea9c23ecfd 88 Pfam PF00462 Glutaredoxin 3 69 4.7E-16 T 13-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VEA_004363 bd1a25b2d1596ec8f5e777e33ba44c21 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 7.1E-60 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VEA_004363 bd1a25b2d1596ec8f5e777e33ba44c21 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 7.1E-60 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VEA_004363 bd1a25b2d1596ec8f5e777e33ba44c21 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 7.1E-60 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VEA_004363 bd1a25b2d1596ec8f5e777e33ba44c21 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 7.1E-60 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VEA_004363 bd1a25b2d1596ec8f5e777e33ba44c21 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 7.1E-60 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VEA_004363 bd1a25b2d1596ec8f5e777e33ba44c21 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 7.1E-60 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VEA_004363 bd1a25b2d1596ec8f5e777e33ba44c21 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 13-10-2018 IPR020583 Inositol monophosphatase, metal-binding site VEA_004363 bd1a25b2d1596ec8f5e777e33ba44c21 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 1.3E-35 T 13-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VEA_004363 bd1a25b2d1596ec8f5e777e33ba44c21 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 1.3E-35 T 13-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VEA_004363 bd1a25b2d1596ec8f5e777e33ba44c21 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 1.3E-35 T 13-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VEA_004363 bd1a25b2d1596ec8f5e777e33ba44c21 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 1.3E-35 T 13-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VEA_004363 bd1a25b2d1596ec8f5e777e33ba44c21 267 Pfam PF00459 Inositol monophosphatase family 2 259 6.9E-70 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VEA_004363 bd1a25b2d1596ec8f5e777e33ba44c21 267 SUPERFAMILY SSF56655 1 259 1.28E-83 T 13-10-2018 VEA_004363 bd1a25b2d1596ec8f5e777e33ba44c21 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 13-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 VEA_004363 bd1a25b2d1596ec8f5e777e33ba44c21 267 Gene3D G3DSA:3.40.190.80 142 266 1.2E-38 T 13-10-2018 VEA_004363 bd1a25b2d1596ec8f5e777e33ba44c21 267 Gene3D G3DSA:3.30.540.10 1 140 8.6E-50 T 13-10-2018 VEA_003824 7984023bb0196a03bc56d3799e2f5d5f 579 SUPERFAMILY SSF51445 194 526 8.72E-78 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VEA_003824 7984023bb0196a03bc56d3799e2f5d5f 579 Pfam PF02065 Melibiase 160 352 6.1E-19 T 13-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VEA_003824 7984023bb0196a03bc56d3799e2f5d5f 579 Gene3D G3DSA:3.20.20.70 188 495 2.0E-92 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_002008 cc215cf7c05e778eb086c4a61e6f1c37 366 SUPERFAMILY SSF55979 245 366 3.93E-36 T 13-10-2018 VEA_002008 cc215cf7c05e778eb086c4a61e6f1c37 366 SMART SM00480 17 362 1.5E-148 T 13-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 VEA_002008 cc215cf7c05e778eb086c4a61e6f1c37 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 3.8E-109 T 13-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 VEA_002008 cc215cf7c05e778eb086c4a61e6f1c37 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 2.2E-38 T 13-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 VEA_002008 cc215cf7c05e778eb086c4a61e6f1c37 366 PIRSF PIRSF000804 1 366 3.0E-118 T 13-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 VEA_002008 cc215cf7c05e778eb086c4a61e6f1c37 366 SUPERFAMILY SSF55979 1 118 3.02E-30 T 13-10-2018 VEA_002008 cc215cf7c05e778eb086c4a61e6f1c37 366 SUPERFAMILY SSF55979 126 244 1.88E-28 T 13-10-2018 VEA_002008 cc215cf7c05e778eb086c4a61e6f1c37 366 Gene3D G3DSA:3.10.150.10 1 122 3.0E-42 T 13-10-2018 VEA_002008 cc215cf7c05e778eb086c4a61e6f1c37 366 Gene3D G3DSA:3.10.150.10 124 247 1.5E-36 T 13-10-2018 VEA_002008 cc215cf7c05e778eb086c4a61e6f1c37 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 1.9E-38 T 13-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 VEA_002008 cc215cf7c05e778eb086c4a61e6f1c37 366 Gene3D G3DSA:3.10.150.10 248 366 3.5E-39 T 13-10-2018 VEA_002008 cc215cf7c05e778eb086c4a61e6f1c37 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 243 1.2E-35 T 13-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 VEA_000168 563f454d256bdb8153b4f14c246aa89c 200 Gene3D G3DSA:3.40.50.1110 20 200 4.3E-64 T 13-10-2018 IPR036514 SGNH hydrolase superfamily VEA_000168 563f454d256bdb8153b4f14c246aa89c 200 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 23 33 - T 13-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 VEA_000168 563f454d256bdb8153b4f14c246aa89c 200 SUPERFAMILY SSF52266 22 199 1.05E-51 T 13-10-2018 VEA_000168 563f454d256bdb8153b4f14c246aa89c 200 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 25 183 9.4E-23 T 13-10-2018 IPR013830 SGNH hydrolase-type esterase domain VEA_000534 19e6f1866e6987bd79f6029bef43d1bf 352 SUPERFAMILY SSF111369 177 243 4.84E-6 T 13-10-2018 VEA_000534 19e6f1866e6987bd79f6029bef43d1bf 352 Pfam PF13437 HlyD family secretion protein 200 288 3.4E-5 T 13-10-2018 VEA_000534 19e6f1866e6987bd79f6029bef43d1bf 352 Pfam PF13533 Biotin-lipoyl like 44 91 2.3E-14 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VEA_000534 19e6f1866e6987bd79f6029bef43d1bf 352 Gene3D G3DSA:2.40.30.170 234 279 1.4E-35 T 13-10-2018 VEA_000534 19e6f1866e6987bd79f6029bef43d1bf 352 Gene3D G3DSA:2.40.50.100 45 233 1.4E-35 T 13-10-2018 VEA_000534 19e6f1866e6987bd79f6029bef43d1bf 352 Gene3D G3DSA:1.10.287.470 77 199 1.4E-35 T 13-10-2018 VEA_000534 19e6f1866e6987bd79f6029bef43d1bf 352 SUPERFAMILY SSF111369 44 169 1.01E-12 T 13-10-2018 VEA_003039 4a61ca6c80d82acb4e8449a743c890df 152 Gene3D G3DSA:3.40.30.10 9 148 9.6E-20 T 13-10-2018 VEA_003039 4a61ca6c80d82acb4e8449a743c890df 152 Pfam PF00085 Thioredoxin 33 138 5.8E-12 T 13-10-2018 IPR013766 Thioredoxin domain GO:0045454 VEA_003039 4a61ca6c80d82acb4e8449a743c890df 152 ProSitePatterns PS00194 Thioredoxin family active site. 50 68 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VEA_003039 4a61ca6c80d82acb4e8449a743c890df 152 SUPERFAMILY SSF52833 22 142 1.26E-24 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VEA_000260 06ceefa4f171c91ff72bd37feb9eacd0 128 ProSitePatterns PS00935 Glyoxalase I signature 2. 69 81 - T 13-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 VEA_000260 06ceefa4f171c91ff72bd37feb9eacd0 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 1.5E-23 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VEA_000260 06ceefa4f171c91ff72bd37feb9eacd0 128 SUPERFAMILY SSF54593 1 126 3.89E-37 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEA_000260 06ceefa4f171c91ff72bd37feb9eacd0 128 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 13-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 VEA_000260 06ceefa4f171c91ff72bd37feb9eacd0 128 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 128 2.7E-59 T 13-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 VEA_000260 06ceefa4f171c91ff72bd37feb9eacd0 128 Gene3D G3DSA:3.10.180.10 1 128 1.9E-48 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEA_002250 6c8a77df2e0c310b183e07cfad836ff5 285 Pfam PF02666 Phosphatidylserine decarboxylase 62 279 7.6E-62 T 13-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 VEA_002250 6c8a77df2e0c310b183e07cfad836ff5 285 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 9 285 49.863 T 13-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 VEA_002250 6c8a77df2e0c310b183e07cfad836ff5 285 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 48 284 6.9E-88 T 13-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 VEA_002257 4256c965b604ba244a856444bf392249 670 Gene3D G3DSA:3.30.1370.100 528 622 8.5E-54 T 13-10-2018 VEA_002257 4256c965b604ba244a856444bf392249 670 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 668 25.22 T 13-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 VEA_002257 4256c965b604ba244a856444bf392249 670 Pfam PF08676 MutL C terminal dimerisation domain 484 624 5.0E-27 T 13-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 VEA_002257 4256c965b604ba244a856444bf392249 670 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 212 329 1.5E-39 T 13-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 VEA_002257 4256c965b604ba244a856444bf392249 670 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 13-10-2018 IPR014762 DNA mismatch repair, conserved site VEA_002257 4256c965b604ba244a856444bf392249 670 SUPERFAMILY SSF118116 484 669 2.48E-37 T 13-10-2018 IPR037198 MutL, C-terminal domain superfamily VEA_002257 4256c965b604ba244a856444bf392249 670 Gene3D G3DSA:3.30.230.10 217 329 1.0E-39 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VEA_002257 4256c965b604ba244a856444bf392249 670 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 1.2E-102 T 13-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 VEA_002257 4256c965b604ba244a856444bf392249 670 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 115 6.0E-11 T 13-10-2018 VEA_002257 4256c965b604ba244a856444bf392249 670 Gene3D G3DSA:3.30.565.10 1 216 6.1E-71 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_002257 4256c965b604ba244a856444bf392249 670 SMART SM01340 212 330 4.5E-59 T 13-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 VEA_002257 4256c965b604ba244a856444bf392249 670 SUPERFAMILY SSF55874 1 207 4.32E-53 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_002257 4256c965b604ba244a856444bf392249 670 Gene3D G3DSA:2.30.42.20 484 666 8.5E-54 T 13-10-2018 VEA_002257 4256c965b604ba244a856444bf392249 670 SMART SM00853 487 629 9.5E-13 T 13-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 VEA_002257 4256c965b604ba244a856444bf392249 670 SUPERFAMILY SSF54211 191 330 6.07E-38 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEA_003828 28926bce37a199f4f6becfdcacd31725 270 Pfam PF03649 Uncharacterised protein family (UPF0014) 9 245 1.2E-71 T 13-10-2018 IPR005226 UPF0014 family VEA_004217 a95cd6cfcc3c2db3e050960d526744fa 857 Gene3D G3DSA:3.40.50.620 33 564 0.0 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_004217 a95cd6cfcc3c2db3e050960d526744fa 857 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 856 0.0 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VEA_004217 a95cd6cfcc3c2db3e050960d526744fa 857 SUPERFAMILY SSF52374 4 666 1.11E-146 T 13-10-2018 VEA_004217 a95cd6cfcc3c2db3e050960d526744fa 857 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 8.6E-79 T 13-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 VEA_004217 a95cd6cfcc3c2db3e050960d526744fa 857 Gene3D G3DSA:3.90.740.10 227 413 0.0 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VEA_004217 a95cd6cfcc3c2db3e050960d526744fa 857 SUPERFAMILY SSF47323 660 856 1.66E-36 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEA_004217 a95cd6cfcc3c2db3e050960d526744fa 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 417 570 1.5E-9 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEA_004217 a95cd6cfcc3c2db3e050960d526744fa 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 172 2.8E-26 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEA_004217 a95cd6cfcc3c2db3e050960d526744fa 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 617 649 2.0E-7 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEA_004217 a95cd6cfcc3c2db3e050960d526744fa 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 7.2E-52 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VEA_004217 a95cd6cfcc3c2db3e050960d526744fa 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 7.2E-52 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VEA_004217 a95cd6cfcc3c2db3e050960d526744fa 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 484 502 7.2E-52 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VEA_004217 a95cd6cfcc3c2db3e050960d526744fa 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 522 544 7.2E-52 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VEA_004217 a95cd6cfcc3c2db3e050960d526744fa 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 555 565 7.2E-52 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VEA_004217 a95cd6cfcc3c2db3e050960d526744fa 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 7.2E-52 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VEA_004217 a95cd6cfcc3c2db3e050960d526744fa 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 7.2E-52 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VEA_004217 a95cd6cfcc3c2db3e050960d526744fa 857 Pfam PF08264 Anticodon-binding domain of tRNA 699 816 9.5E-17 T 13-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 VEA_004217 a95cd6cfcc3c2db3e050960d526744fa 857 Gene3D G3DSA:3.10.20.590 796 856 2.9E-24 T 13-10-2018 VEA_004217 a95cd6cfcc3c2db3e050960d526744fa 857 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 856 23.428 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VEA_004217 a95cd6cfcc3c2db3e050960d526744fa 857 Gene3D G3DSA:3.10.330.110 565 626 0.0 T 13-10-2018 VEA_004217 a95cd6cfcc3c2db3e050960d526744fa 857 Gene3D G3DSA:1.10.730.10 8 788 0.0 T 13-10-2018 VEA_004217 a95cd6cfcc3c2db3e050960d526744fa 857 SUPERFAMILY SSF50677 226 414 1.88E-56 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VEA_004217 a95cd6cfcc3c2db3e050960d526744fa 857 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEA_004523 bf39ca1be7b388b0f460ba0627155dd0 476 Pfam PF01467 Cytidylyltransferase-like 345 468 3.1E-14 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VEA_004523 bf39ca1be7b388b0f460ba0627155dd0 476 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 7 312 2.7E-127 T 13-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 VEA_004523 bf39ca1be7b388b0f460ba0627155dd0 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 43.072 T 13-10-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 VEA_004523 bf39ca1be7b388b0f460ba0627155dd0 476 Gene3D G3DSA:3.40.50.620 322 474 4.9E-37 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_004523 bf39ca1be7b388b0f460ba0627155dd0 476 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 472 3.4E-61 T 13-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 VEA_004523 bf39ca1be7b388b0f460ba0627155dd0 476 Pfam PF00294 pfkB family carbohydrate kinase 13 303 5.4E-48 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB VEA_004523 bf39ca1be7b388b0f460ba0627155dd0 476 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VEA_004523 bf39ca1be7b388b0f460ba0627155dd0 476 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 6.1E-18 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VEA_004523 bf39ca1be7b388b0f460ba0627155dd0 476 SUPERFAMILY SSF53613 12 302 6.08E-61 T 13-10-2018 IPR029056 Ribokinase-like VEA_004523 bf39ca1be7b388b0f460ba0627155dd0 476 SUPERFAMILY SSF52374 340 471 3.94E-23 T 13-10-2018 VEA_004523 bf39ca1be7b388b0f460ba0627155dd0 476 Gene3D G3DSA:3.40.1190.20 6 310 3.8E-113 T 13-10-2018 IPR029056 Ribokinase-like VEA_002908 90e4e372b6dc9d5a614a41b79f47132f 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 6.4E-70 T 13-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002908 90e4e372b6dc9d5a614a41b79f47132f 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 4.6E-137 T 13-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002908 90e4e372b6dc9d5a614a41b79f47132f 331 SUPERFAMILY SSF51735 3 166 3.2E-68 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_002908 90e4e372b6dc9d5a614a41b79f47132f 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 1.5E-46 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002908 90e4e372b6dc9d5a614a41b79f47132f 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 1.5E-46 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002908 90e4e372b6dc9d5a614a41b79f47132f 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 1.5E-46 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002908 90e4e372b6dc9d5a614a41b79f47132f 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 1.5E-46 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002908 90e4e372b6dc9d5a614a41b79f47132f 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 1.5E-46 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002908 90e4e372b6dc9d5a614a41b79f47132f 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 4.4E-40 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002908 90e4e372b6dc9d5a614a41b79f47132f 331 Gene3D G3DSA:3.40.50.720 4 326 3.0E-155 T 13-10-2018 VEA_002908 90e4e372b6dc9d5a614a41b79f47132f 331 SMART SM00846 3 150 4.6E-97 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002908 90e4e372b6dc9d5a614a41b79f47132f 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 13-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002908 90e4e372b6dc9d5a614a41b79f47132f 331 Gene3D G3DSA:3.30.360.10 149 314 3.0E-155 T 13-10-2018 VEA_002908 90e4e372b6dc9d5a614a41b79f47132f 331 PIRSF PIRSF000149 1 331 4.4E-134 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002908 90e4e372b6dc9d5a614a41b79f47132f 331 SUPERFAMILY SSF55347 149 312 1.68E-77 T 13-10-2018 VEA_001905 9f2f698447464bf25ad492926855a328 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 13-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VEA_001905 9f2f698447464bf25ad492926855a328 469 Gene3D G3DSA:3.30.590.10 105 457 2.5E-147 T 13-10-2018 VEA_001905 9f2f698447464bf25ad492926855a328 469 Gene3D G3DSA:3.10.20.70 2 104 1.7E-40 T 13-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VEA_001905 9f2f698447464bf25ad492926855a328 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 13-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 VEA_001905 9f2f698447464bf25ad492926855a328 469 SMART SM01230 102 379 3.6E-151 T 13-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VEA_001905 9f2f698447464bf25ad492926855a328 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 9.0E-31 T 13-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 VEA_001905 9f2f698447464bf25ad492926855a328 469 SUPERFAMILY SSF54368 3 100 5.89E-36 T 13-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VEA_001905 9f2f698447464bf25ad492926855a328 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 1.2E-210 T 13-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VEA_001905 9f2f698447464bf25ad492926855a328 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 4.0E-137 T 13-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VEA_001905 9f2f698447464bf25ad492926855a328 469 SUPERFAMILY SSF55931 102 468 8.53E-137 T 13-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 VEA_001905 9f2f698447464bf25ad492926855a328 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 13-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 VEA_000864 0f256531dbeea8987333844513a788e8 252 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_000864 0f256531dbeea8987333844513a788e8 252 Gene3D G3DSA:3.40.50.300 7 230 2.4E-56 T 13-10-2018 VEA_000864 0f256531dbeea8987333844513a788e8 252 SUPERFAMILY SSF52540 7 213 5.06E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000864 0f256531dbeea8987333844513a788e8 252 Pfam PF00005 ABC transporter 26 167 1.1E-26 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_000864 0f256531dbeea8987333844513a788e8 252 SMART SM00382 34 214 8.0E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_003789 0b6a9f9c107944f0e8d2dfa02dd21bdf 502 Pfam PF00149 Calcineurin-like phosphoesterase 18 199 2.0E-12 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VEA_003789 0b6a9f9c107944f0e8d2dfa02dd21bdf 502 PRINTS PR01607 Apyrase family signature 152 169 8.1E-38 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEA_003789 0b6a9f9c107944f0e8d2dfa02dd21bdf 502 PRINTS PR01607 Apyrase family signature 356 379 8.1E-38 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEA_003789 0b6a9f9c107944f0e8d2dfa02dd21bdf 502 PRINTS PR01607 Apyrase family signature 425 444 8.1E-38 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEA_003789 0b6a9f9c107944f0e8d2dfa02dd21bdf 502 PRINTS PR01607 Apyrase family signature 183 206 8.1E-38 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEA_003789 0b6a9f9c107944f0e8d2dfa02dd21bdf 502 PRINTS PR01607 Apyrase family signature 228 248 8.1E-38 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEA_003789 0b6a9f9c107944f0e8d2dfa02dd21bdf 502 Pfam PF02872 5'-nucleotidase, C-terminal domain 301 450 2.7E-29 T 13-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEA_003789 0b6a9f9c107944f0e8d2dfa02dd21bdf 502 SUPERFAMILY SSF56300 2 299 3.35E-82 T 13-10-2018 VEA_003789 0b6a9f9c107944f0e8d2dfa02dd21bdf 502 Gene3D G3DSA:3.60.21.10 1 299 1.3E-99 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like VEA_003789 0b6a9f9c107944f0e8d2dfa02dd21bdf 502 SUPERFAMILY SSF55816 301 479 4.84E-40 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEA_003789 0b6a9f9c107944f0e8d2dfa02dd21bdf 502 Gene3D G3DSA:3.90.780.10 300 485 5.7E-44 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEA_003789 0b6a9f9c107944f0e8d2dfa02dd21bdf 502 ProSitePatterns PS00786 5'-nucleotidase signature 2. 54 65 - T 13-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEA_001361 3294e949e9801e6c77dda3b7a9099c65 92 SUPERFAMILY SSF54534 7 90 1.44E-25 T 13-10-2018 VEA_001361 3294e949e9801e6c77dda3b7a9099c65 92 Gene3D G3DSA:3.10.50.40 2 92 9.6E-34 T 13-10-2018 VEA_001361 3294e949e9801e6c77dda3b7a9099c65 92 Pfam PF13616 PPIC-type PPIASE domain 13 89 2.1E-22 T 13-10-2018 VEA_002059 7c3df632be0006111562b478de2e9bfd 369 Gene3D G3DSA:3.40.50.450 1 293 3.2E-98 T 13-10-2018 VEA_002059 7c3df632be0006111562b478de2e9bfd 369 SUPERFAMILY SSF102405 83 290 3.92E-42 T 13-10-2018 VEA_002059 7c3df632be0006111562b478de2e9bfd 369 Gene3D G3DSA:1.10.10.10 305 364 6.9E-6 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_002059 7c3df632be0006111562b478de2e9bfd 369 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 76 288 8.0E-80 T 13-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 VEA_002059 7c3df632be0006111562b478de2e9bfd 369 Pfam PF02481 DNA recombination-mediator protein A 77 280 1.3E-77 T 13-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 VEA_000392 0023bd12bdc8174fe1f75b0a528feeec 293 SUPERFAMILY SSF46785 1 85 6.74E-25 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000392 0023bd12bdc8174fe1f75b0a528feeec 293 Pfam PF03466 LysR substrate binding domain 117 283 1.2E-29 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_000392 0023bd12bdc8174fe1f75b0a528feeec 293 Gene3D G3DSA:3.40.190.10 163 267 2.4E-36 T 13-10-2018 VEA_000392 0023bd12bdc8174fe1f75b0a528feeec 293 Gene3D G3DSA:1.10.10.10 1 93 1.2E-33 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000392 0023bd12bdc8174fe1f75b0a528feeec 293 Gene3D G3DSA:3.40.190.10 94 280 2.4E-36 T 13-10-2018 VEA_000392 0023bd12bdc8174fe1f75b0a528feeec 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.9E-24 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000392 0023bd12bdc8174fe1f75b0a528feeec 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.2E-11 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000392 0023bd12bdc8174fe1f75b0a528feeec 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.2E-11 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000392 0023bd12bdc8174fe1f75b0a528feeec 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.2E-11 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000392 0023bd12bdc8174fe1f75b0a528feeec 293 SUPERFAMILY SSF53850 117 282 1.86E-25 T 13-10-2018 VEA_003178 9cfee33b1e5beb2a3ebd4571c137c842 138 Pfam PF07007 Lysozyme inhibitor LprI 25 117 1.3E-13 T 13-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal VEA_003178 9cfee33b1e5beb2a3ebd4571c137c842 138 Gene3D G3DSA:1.20.1270.180 16 128 2.1E-13 T 13-10-2018 VEA_002600 3937bfa93900d93eb8a763b69c8c8d86 157 PIRSF PIRSF006092 1 157 3.6E-48 T 13-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 VEA_002600 3937bfa93900d93eb8a763b69c8c8d86 157 Pfam PF03449 Transcription elongation factor, N-terminal 4 73 3.7E-25 T 13-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VEA_002600 3937bfa93900d93eb8a763b69c8c8d86 157 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 47 - T 13-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VEA_002600 3937bfa93900d93eb8a763b69c8c8d86 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 1.4E-27 T 13-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VEA_002600 3937bfa93900d93eb8a763b69c8c8d86 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 32.24 T 13-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 VEA_002600 3937bfa93900d93eb8a763b69c8c8d86 157 Gene3D G3DSA:1.10.287.180 1 74 1.1E-25 T 13-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 VEA_002600 3937bfa93900d93eb8a763b69c8c8d86 157 Gene3D G3DSA:3.10.50.30 75 157 4.4E-31 T 13-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 VEA_002600 3937bfa93900d93eb8a763b69c8c8d86 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 13-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VEA_002600 3937bfa93900d93eb8a763b69c8c8d86 157 SUPERFAMILY SSF46557 2 75 1.83E-25 T 13-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 VEA_002600 3937bfa93900d93eb8a763b69c8c8d86 157 SUPERFAMILY SSF54534 81 156 3.79E-24 T 13-10-2018 VEA_002600 3937bfa93900d93eb8a763b69c8c8d86 157 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 154 5.5E-54 T 13-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 VEA_003125 059ece7d47bc3b59b6110c3b96d605be 345 Pfam PF09375 Imelysin 47 324 2.7E-42 T 13-10-2018 IPR018976 Imelysin-like domain VEA_003125 059ece7d47bc3b59b6110c3b96d605be 345 Gene3D G3DSA:1.20.1420.20 27 345 7.9E-74 T 13-10-2018 IPR038352 Imelysin-like domain superfamily VEA_003723 f9f617fba9c7248a850ac575e98780bd 511 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 5 496 7.2E-215 T 13-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VEA_003723 f9f617fba9c7248a850ac575e98780bd 511 Gene3D G3DSA:1.20.200.10 198 509 1.5E-122 T 13-10-2018 VEA_003723 f9f617fba9c7248a850ac575e98780bd 511 SUPERFAMILY SSF48557 4 506 1.26E-192 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 VEA_003723 f9f617fba9c7248a850ac575e98780bd 511 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 504 44.292 T 13-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VEA_003723 f9f617fba9c7248a850ac575e98780bd 511 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 13-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 VEA_003723 f9f617fba9c7248a850ac575e98780bd 511 Gene3D G3DSA:1.10.275.10 2 197 2.2E-70 T 13-10-2018 IPR024083 Fumarase/histidase, N-terminal VEA_003723 f9f617fba9c7248a850ac575e98780bd 511 Pfam PF00221 Aromatic amino acid lyase 12 470 1.8E-188 T 13-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 VEA_002517 0090bd1028d890104dbead2bae65a492 853 SUPERFAMILY SSF52540 566 797 1.54E-60 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002517 0090bd1028d890104dbead2bae65a492 853 Pfam PF00488 MutS domain V 609 796 1.7E-87 T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 VEA_002517 0090bd1028d890104dbead2bae65a492 853 Gene3D G3DSA:1.10.1420.10 386 502 6.1E-105 T 13-10-2018 VEA_002517 0090bd1028d890104dbead2bae65a492 853 SMART SM00533 283 590 1.2E-109 T 13-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 VEA_002517 0090bd1028d890104dbead2bae65a492 853 Gene3D G3DSA:3.40.1170.10 1 121 6.7E-52 T 13-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 VEA_002517 0090bd1028d890104dbead2bae65a492 853 Gene3D G3DSA:1.10.1420.10 266 558 6.1E-105 T 13-10-2018 VEA_002517 0090bd1028d890104dbead2bae65a492 853 SUPERFAMILY SSF53150 114 266 1.2E-41 T 13-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 VEA_002517 0090bd1028d890104dbead2bae65a492 853 Pfam PF05190 MutS family domain IV 427 517 1.9E-30 T 13-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 VEA_002517 0090bd1028d890104dbead2bae65a492 853 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 7 851 0.0 T 13-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 VEA_002517 0090bd1028d890104dbead2bae65a492 853 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 7 845 25.315 T 13-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 VEA_002517 0090bd1028d890104dbead2bae65a492 853 PIRSF PIRSF037677 1 182 1.1E-26 T 13-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 VEA_002517 0090bd1028d890104dbead2bae65a492 853 PIRSF PIRSF037677 184 824 1.7E-132 T 13-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 VEA_002517 0090bd1028d890104dbead2bae65a492 853 Pfam PF01624 MutS domain I 8 119 3.6E-41 T 13-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 VEA_002517 0090bd1028d890104dbead2bae65a492 853 SUPERFAMILY SSF48334 267 564 9.68E-93 T 13-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily VEA_002517 0090bd1028d890104dbead2bae65a492 853 SMART SM00534 606 793 4.4E-119 T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 VEA_002517 0090bd1028d890104dbead2bae65a492 853 SUPERFAMILY SSF55271 4 113 7.85E-42 T 13-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 VEA_002517 0090bd1028d890104dbead2bae65a492 853 Gene3D G3DSA:3.30.420.110 127 261 1.7E-36 T 13-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 VEA_002517 0090bd1028d890104dbead2bae65a492 853 Pfam PF05188 MutS domain II 128 253 1.3E-30 T 13-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 VEA_002517 0090bd1028d890104dbead2bae65a492 853 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 687 703 - T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 VEA_002517 0090bd1028d890104dbead2bae65a492 853 Gene3D G3DSA:3.40.50.300 567 847 7.9E-101 T 13-10-2018 VEA_002517 0090bd1028d890104dbead2bae65a492 853 Pfam PF05192 MutS domain III 269 558 2.5E-41 T 13-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 VEA_002765 386d0b6224be90fdb3fdc42cccb95593 104 PRINTS PR00605 Class IC cytochrome C signature 78 100 7.7E-5 T 13-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VEA_002765 386d0b6224be90fdb3fdc42cccb95593 104 PRINTS PR00605 Class IC cytochrome C signature 33 44 7.7E-5 T 13-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VEA_002765 386d0b6224be90fdb3fdc42cccb95593 104 Pfam PF00034 Cytochrome c 34 104 3.4E-9 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_002765 386d0b6224be90fdb3fdc42cccb95593 104 Gene3D G3DSA:1.10.760.10 22 104 8.4E-26 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEA_002765 386d0b6224be90fdb3fdc42cccb95593 104 SUPERFAMILY SSF46626 4 104 9.02E-24 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEA_001482 a4723bcc31de8a38cbc1dc42a7eca251 589 Gene3D G3DSA:2.130.10.10 51 309 1.5E-7 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VEA_001482 a4723bcc31de8a38cbc1dc42a7eca251 589 SUPERFAMILY SSF75011 70 517 3.66E-14 T 13-10-2018 VEA_001991 52568c89d58cb7b68aab7a980fd2023f 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 1.6E-15 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_001991 52568c89d58cb7b68aab7a980fd2023f 314 SUPERFAMILY SSF53850 92 298 3.44E-39 T 13-10-2018 VEA_001991 52568c89d58cb7b68aab7a980fd2023f 314 Gene3D G3DSA:1.10.10.10 3 91 7.9E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001991 52568c89d58cb7b68aab7a980fd2023f 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 1.3E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_001991 52568c89d58cb7b68aab7a980fd2023f 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 1.3E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_001991 52568c89d58cb7b68aab7a980fd2023f 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 1.3E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_001991 52568c89d58cb7b68aab7a980fd2023f 314 Gene3D G3DSA:3.40.190.10 93 295 5.4E-67 T 13-10-2018 VEA_001991 52568c89d58cb7b68aab7a980fd2023f 314 SUPERFAMILY SSF46785 7 88 2.03E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_001991 52568c89d58cb7b68aab7a980fd2023f 314 Gene3D G3DSA:3.40.190.10 172 271 5.4E-67 T 13-10-2018 VEA_001991 52568c89d58cb7b68aab7a980fd2023f 314 Pfam PF03466 LysR substrate binding domain 100 299 1.0E-21 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_003705 3b00031852c178471b45ce4728a3be59 801 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 800 1.8E-277 T 13-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 VEA_003705 3b00031852c178471b45ce4728a3be59 801 SUPERFAMILY SSF46955 403 475 1.19E-19 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily VEA_003705 3b00031852c178471b45ce4728a3be59 801 SUPERFAMILY SSF54991 703 800 2.22E-30 T 13-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 VEA_003705 3b00031852c178471b45ce4728a3be59 801 Gene3D G3DSA:3.30.56.10 401 475 8.8E-26 T 13-10-2018 VEA_003705 3b00031852c178471b45ce4728a3be59 801 Gene3D G3DSA:3.30.56.10 7 179 1.5E-70 T 13-10-2018 VEA_003705 3b00031852c178471b45ce4728a3be59 801 Pfam PF01588 Putative tRNA binding domain 45 145 4.8E-26 T 13-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 VEA_003705 3b00031852c178471b45ce4728a3be59 801 SUPERFAMILY SSF55681 467 695 3.48E-49 T 13-10-2018 VEA_003705 3b00031852c178471b45ce4728a3be59 801 Gene3D G3DSA:3.50.40.10 197 395 1.4E-83 T 13-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 VEA_003705 3b00031852c178471b45ce4728a3be59 801 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 794 47.115 T 13-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 VEA_003705 3b00031852c178471b45ce4728a3be59 801 Gene3D G3DSA:3.30.70.380 708 801 1.2E-29 T 13-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 VEA_003705 3b00031852c178471b45ce4728a3be59 801 SUPERFAMILY SSF56037 196 394 5.23E-78 T 13-10-2018 VEA_003705 3b00031852c178471b45ce4728a3be59 801 SMART SM00896 707 800 4.0E-45 T 13-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 VEA_003705 3b00031852c178471b45ce4728a3be59 801 Pfam PF03147 Ferredoxin-fold anticodon binding domain 707 800 1.4E-28 T 13-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 VEA_003705 3b00031852c178471b45ce4728a3be59 801 SMART SM00874 403 471 4.8E-29 T 13-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 VEA_003705 3b00031852c178471b45ce4728a3be59 801 Pfam PF03483 B3/4 domain 212 385 1.5E-71 T 13-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 VEA_003705 3b00031852c178471b45ce4728a3be59 801 SMART SM00873 212 385 1.7E-100 T 13-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 VEA_003705 3b00031852c178471b45ce4728a3be59 801 Gene3D G3DSA:2.40.50.140 39 154 1.5E-70 T 13-10-2018 VEA_003705 3b00031852c178471b45ce4728a3be59 801 SUPERFAMILY SSF50249 38 196 4.41E-48 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_003705 3b00031852c178471b45ce4728a3be59 801 Pfam PF03484 tRNA synthetase B5 domain 406 471 3.2E-17 T 13-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 VEA_003705 3b00031852c178471b45ce4728a3be59 801 Gene3D G3DSA:3.30.930.10 486 697 2.4E-60 T 13-10-2018 VEA_000519 0c0abc5660b6e554d7e56dd01e78ea5c 403 PIRSF PIRSF000429 1 403 5.9E-131 T 13-10-2018 IPR002155 Thiolase GO:0016747 VEA_000519 0c0abc5660b6e554d7e56dd01e78ea5c 403 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 400 2.6E-148 T 13-10-2018 IPR002155 Thiolase GO:0016747 VEA_000519 0c0abc5660b6e554d7e56dd01e78ea5c 403 Pfam PF00108 Thiolase, N-terminal domain 5 264 3.1E-97 T 13-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 VEA_000519 0c0abc5660b6e554d7e56dd01e78ea5c 403 SUPERFAMILY SSF53901 5 271 1.48E-83 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VEA_000519 0c0abc5660b6e554d7e56dd01e78ea5c 403 SUPERFAMILY SSF53901 272 400 3.55E-39 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VEA_000519 0c0abc5660b6e554d7e56dd01e78ea5c 403 ProSitePatterns PS00099 Thiolases active site. 383 396 - T 13-10-2018 IPR020610 Thiolase, active site GO:0016747 VEA_000519 0c0abc5660b6e554d7e56dd01e78ea5c 403 Gene3D G3DSA:3.40.47.10 7 277 4.5E-149 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VEA_000519 0c0abc5660b6e554d7e56dd01e78ea5c 403 Pfam PF02803 Thiolase, C-terminal domain 272 400 1.4E-45 T 13-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 VEA_000519 0c0abc5660b6e554d7e56dd01e78ea5c 403 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 85 103 - T 13-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 VEA_000519 0c0abc5660b6e554d7e56dd01e78ea5c 403 ProSitePatterns PS00737 Thiolases signature 2. 348 364 - T 13-10-2018 IPR020613 Thiolase, conserved site GO:0016747 VEA_000519 0c0abc5660b6e554d7e56dd01e78ea5c 403 Gene3D G3DSA:3.40.47.10 127 399 4.5E-149 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VEA_002570 caa665a6d26e676100a451948e9e0405 865 Gene3D G3DSA:1.25.40.310 1 161 1.3E-72 T 13-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VEA_002570 caa665a6d26e676100a451948e9e0405 865 Gene3D G3DSA:3.20.19.10 162 361 2.5E-82 T 13-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 VEA_002570 caa665a6d26e676100a451948e9e0405 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 VEA_002570 caa665a6d26e676100a451948e9e0405 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 1.8E-101 T 13-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VEA_002570 caa665a6d26e676100a451948e9e0405 865 SUPERFAMILY SSF52016 162 372 3.14E-72 T 13-10-2018 VEA_002570 caa665a6d26e676100a451948e9e0405 865 Gene3D G3DSA:3.40.1060.10 385 681 5.3E-150 T 13-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 VEA_002570 caa665a6d26e676100a451948e9e0405 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 2.6E-42 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEA_002570 caa665a6d26e676100a451948e9e0405 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 853 0.0 T 13-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VEA_002570 caa665a6d26e676100a451948e9e0405 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 2.4E-67 T 13-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VEA_002570 caa665a6d26e676100a451948e9e0405 865 SUPERFAMILY SSF74778 2 160 7.32E-69 T 13-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VEA_002570 caa665a6d26e676100a451948e9e0405 865 Gene3D G3DSA:3.30.499.10 402 529 5.3E-150 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 VEA_002570 caa665a6d26e676100a451948e9e0405 865 PIRSF PIRSF036687 1 859 0.0 T 13-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VEA_002570 caa665a6d26e676100a451948e9e0405 865 SUPERFAMILY SSF53732 379 861 4.84E-148 T 13-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 VEA_002570 caa665a6d26e676100a451948e9e0405 865 Gene3D G3DSA:3.30.499.10 683 865 1.3E-72 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 VEA_002570 caa665a6d26e676100a451948e9e0405 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 VEA_003234 2017a045773179752430f7c001216e48 794 Pfam PF12161 HsdM N-terminal domain 10 149 4.1E-20 T 13-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain VEA_003234 2017a045773179752430f7c001216e48 794 Gene3D G3DSA:3.40.50.150 176 505 2.2E-92 T 13-10-2018 VEA_003234 2017a045773179752430f7c001216e48 794 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 304 310 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VEA_003234 2017a045773179752430f7c001216e48 794 SUPERFAMILY SSF53335 7 579 2.7E-114 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_003234 2017a045773179752430f7c001216e48 794 Pfam PF02384 N-6 DNA Methylase 177 484 1.6E-59 T 13-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 VEA_003234 2017a045773179752430f7c001216e48 794 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 301 313 5.5E-13 T 13-10-2018 VEA_003234 2017a045773179752430f7c001216e48 794 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 227 241 5.5E-13 T 13-10-2018 VEA_003234 2017a045773179752430f7c001216e48 794 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 197 213 5.5E-13 T 13-10-2018 VEA_002033 4e56d5ac9253371a9f7d0c6cfaf55225 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 60 242 1.4E-25 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_002033 4e56d5ac9253371a9f7d0c6cfaf55225 246 SUPERFAMILY SSF161098 41 227 5.89E-46 T 13-10-2018 IPR035906 MetI-like superfamily VEA_002033 4e56d5ac9253371a9f7d0c6cfaf55225 246 Gene3D G3DSA:1.10.3720.10 32 242 2.1E-55 T 13-10-2018 IPR035906 MetI-like superfamily VEA_002033 4e56d5ac9253371a9f7d0c6cfaf55225 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 38 136 6.4E-29 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VEA_003745 2a2f9623a84ee0f402e26ae6410eae3a 595 Gene3D G3DSA:3.40.50.300 343 593 5.1E-64 T 13-10-2018 VEA_003745 2a2f9623a84ee0f402e26ae6410eae3a 595 SUPERFAMILY SSF52540 349 581 2.82E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003745 2a2f9623a84ee0f402e26ae6410eae3a 595 Pfam PF00005 ABC transporter 369 512 9.7E-26 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_003745 2a2f9623a84ee0f402e26ae6410eae3a 595 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 20 554 1.2E-177 T 13-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 VEA_003745 2a2f9623a84ee0f402e26ae6410eae3a 595 SMART SM00382 375 558 5.5E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_003745 2a2f9623a84ee0f402e26ae6410eae3a 595 Pfam PF00664 ABC transporter transmembrane region 24 292 3.9E-43 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VEA_003745 2a2f9623a84ee0f402e26ae6410eae3a 595 SUPERFAMILY SSF90123 5 333 8.11E-59 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEA_003745 2a2f9623a84ee0f402e26ae6410eae3a 595 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_003745 2a2f9623a84ee0f402e26ae6410eae3a 595 Gene3D G3DSA:1.20.1560.10 1 334 1.1E-52 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEA_000499 c30b8979cd547d66cdc13437a3ce2423 330 Pfam PF00691 OmpA family 217 312 2.7E-25 T 13-10-2018 IPR006665 OmpA-like domain VEA_000499 c30b8979cd547d66cdc13437a3ce2423 330 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 301 321 4.0E-11 T 13-10-2018 VEA_000499 c30b8979cd547d66cdc13437a3ce2423 330 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 263 280 4.0E-11 T 13-10-2018 VEA_000499 c30b8979cd547d66cdc13437a3ce2423 330 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 281 300 4.0E-11 T 13-10-2018 VEA_000499 c30b8979cd547d66cdc13437a3ce2423 330 Gene3D G3DSA:3.30.1330.60 204 325 4.5E-42 T 13-10-2018 IPR036737 OmpA-like domain superfamily VEA_000499 c30b8979cd547d66cdc13437a3ce2423 330 ProSitePatterns PS01068 OmpA-like domain. 250 294 - T 13-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 VEA_000499 c30b8979cd547d66cdc13437a3ce2423 330 SUPERFAMILY SSF103088 211 318 3.27E-38 T 13-10-2018 IPR036737 OmpA-like domain superfamily VEA_000499 c30b8979cd547d66cdc13437a3ce2423 330 PRINTS PR01021 OMPA domain signature 263 279 3.1E-15 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEA_000499 c30b8979cd547d66cdc13437a3ce2423 330 PRINTS PR01021 OMPA domain signature 248 263 3.1E-15 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEA_000499 c30b8979cd547d66cdc13437a3ce2423 330 PRINTS PR01021 OMPA domain signature 218 240 3.1E-15 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEA_000499 c30b8979cd547d66cdc13437a3ce2423 330 SUPERFAMILY SSF56925 24 181 1.65E-32 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VEA_000499 c30b8979cd547d66cdc13437a3ce2423 330 Pfam PF13505 Outer membrane protein beta-barrel domain 6 181 3.2E-25 T 13-10-2018 IPR027385 Outer membrane protein beta-barrel VEA_000499 c30b8979cd547d66cdc13437a3ce2423 330 Gene3D G3DSA:2.40.160.20 10 203 2.7E-42 T 13-10-2018 VEA_002302 197fcfdc576dbee8a47cabfea1e73c44 158 Gene3D G3DSA:1.20.1260.10 1 158 1.2E-71 T 13-10-2018 IPR012347 Ferritin-like VEA_002302 197fcfdc576dbee8a47cabfea1e73c44 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VEA_002302 197fcfdc576dbee8a47cabfea1e73c44 158 SUPERFAMILY SSF47240 1 153 1.83E-55 T 13-10-2018 IPR009078 Ferritin-like superfamily VEA_002302 197fcfdc576dbee8a47cabfea1e73c44 158 PIRSF PIRSF002560 1 157 8.3E-73 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VEA_002302 197fcfdc576dbee8a47cabfea1e73c44 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 157 3.7E-82 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VEA_002302 197fcfdc576dbee8a47cabfea1e73c44 158 PRINTS PR00601 Bacterioferritin signature 23 43 1.6E-72 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VEA_002302 197fcfdc576dbee8a47cabfea1e73c44 158 PRINTS PR00601 Bacterioferritin signature 86 106 1.6E-72 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VEA_002302 197fcfdc576dbee8a47cabfea1e73c44 158 PRINTS PR00601 Bacterioferritin signature 44 64 1.6E-72 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VEA_002302 197fcfdc576dbee8a47cabfea1e73c44 158 PRINTS PR00601 Bacterioferritin signature 107 127 1.6E-72 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VEA_002302 197fcfdc576dbee8a47cabfea1e73c44 158 PRINTS PR00601 Bacterioferritin signature 3 22 1.6E-72 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VEA_002302 197fcfdc576dbee8a47cabfea1e73c44 158 PRINTS PR00601 Bacterioferritin signature 128 149 1.6E-72 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VEA_002302 197fcfdc576dbee8a47cabfea1e73c44 158 PRINTS PR00601 Bacterioferritin signature 65 85 1.6E-72 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VEA_002302 197fcfdc576dbee8a47cabfea1e73c44 158 Pfam PF00210 Ferritin-like domain 8 143 2.2E-40 T 13-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 VEA_001733 e5591bb82ebd4e6a3b8d81c487ceb208 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 13-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001733 e5591bb82ebd4e6a3b8d81c487ceb208 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 9.4E-15 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_001733 e5591bb82ebd4e6a3b8d81c487ceb208 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 9.4E-15 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_001733 e5591bb82ebd4e6a3b8d81c487ceb208 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 9.4E-15 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_001733 e5591bb82ebd4e6a3b8d81c487ceb208 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 80 25.318 T 13-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_001733 e5591bb82ebd4e6a3b8d81c487ceb208 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 5 76 1.0E-36 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_001733 e5591bb82ebd4e6a3b8d81c487ceb208 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 5 76 3.4E-38 T 13-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_001733 e5591bb82ebd4e6a3b8d81c487ceb208 84 SUPERFAMILY SSF50249 6 83 3.9E-34 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_001733 e5591bb82ebd4e6a3b8d81c487ceb208 84 Pfam PF00366 Ribosomal protein S17 10 77 1.1E-34 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_001733 e5591bb82ebd4e6a3b8d81c487ceb208 84 Gene3D G3DSA:2.40.50.140 1 84 2.2E-38 T 13-10-2018 VEA_001223 8e7c50d07d862ccff80a731b122790dc 379 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 13-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 VEA_001223 8e7c50d07d862ccff80a731b122790dc 379 Gene3D G3DSA:3.20.20.70 3 378 4.0E-126 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_001223 8e7c50d07d862ccff80a731b122790dc 379 Pfam PF01070 FMN-dependent dehydrogenase 13 375 5.5E-126 T 13-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 VEA_001223 8e7c50d07d862ccff80a731b122790dc 379 SUPERFAMILY SSF51395 7 375 2.87E-98 T 13-10-2018 VEA_001223 8e7c50d07d862ccff80a731b122790dc 379 PIRSF PIRSF000138 2 379 3.9E-122 T 13-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 VEA_003077 5b8ad441f97afd869789fd9dbadab60e 846 Gene3D G3DSA:1.10.287.130 423 521 9.1E-7 T 13-10-2018 VEA_003077 5b8ad441f97afd869789fd9dbadab60e 846 Gene3D G3DSA:3.40.50.2300 709 844 2.0E-33 T 13-10-2018 VEA_003077 5b8ad441f97afd869789fd9dbadab60e 846 SMART SM00387 574 683 1.8E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_003077 5b8ad441f97afd869789fd9dbadab60e 846 PRINTS PR00344 Bacterial sensor protein C-terminal signature 643 661 3.1E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_003077 5b8ad441f97afd869789fd9dbadab60e 846 PRINTS PR00344 Bacterial sensor protein C-terminal signature 613 627 3.1E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_003077 5b8ad441f97afd869789fd9dbadab60e 846 PRINTS PR00344 Bacterial sensor protein C-terminal signature 631 641 3.1E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_003077 5b8ad441f97afd869789fd9dbadab60e 846 PRINTS PR00344 Bacterial sensor protein C-terminal signature 667 680 3.1E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_003077 5b8ad441f97afd869789fd9dbadab60e 846 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 581 680 2.0E-13 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_003077 5b8ad441f97afd869789fd9dbadab60e 846 Pfam PF00072 Response regulator receiver domain 723 831 8.4E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_003077 5b8ad441f97afd869789fd9dbadab60e 846 Gene3D G3DSA:3.30.565.10 534 685 1.4E-26 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_003077 5b8ad441f97afd869789fd9dbadab60e 846 SMART SM00388 461 530 3.6E-4 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_003077 5b8ad441f97afd869789fd9dbadab60e 846 Pfam PF00512 His Kinase A (phospho-acceptor) domain 464 526 9.1E-7 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_003077 5b8ad441f97afd869789fd9dbadab60e 846 SUPERFAMILY SSF52172 721 837 2.85E-31 T 13-10-2018 IPR011006 CheY-like superfamily VEA_003077 5b8ad441f97afd869789fd9dbadab60e 846 SUPERFAMILY SSF55874 530 683 4.85E-27 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_003077 5b8ad441f97afd869789fd9dbadab60e 846 SMART SM00448 721 831 9.7E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_003077 5b8ad441f97afd869789fd9dbadab60e 846 SUPERFAMILY SSF47384 452 518 7.46E-6 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEA_003911 45e1053a3b808d560a58549afb7d2285 250 Pfam PF16331 TolA binding protein trimerisation 42 116 1.3E-24 T 13-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 VEA_003911 45e1053a3b808d560a58549afb7d2285 250 SMART SM00028 207 240 0.27 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_003911 45e1053a3b808d560a58549afb7d2285 250 SMART SM00028 171 204 28.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_003911 45e1053a3b808d560a58549afb7d2285 250 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 134 250 3.3E-39 T 13-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal VEA_003911 45e1053a3b808d560a58549afb7d2285 250 Gene3D G3DSA:1.20.5.110 40 119 1.3E-21 T 13-10-2018 VEA_003911 45e1053a3b808d560a58549afb7d2285 250 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 5 250 17.585 T 13-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 VEA_003911 45e1053a3b808d560a58549afb7d2285 250 Pfam PF13174 Tetratricopeptide repeat 208 240 8.9E-8 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_003911 45e1053a3b808d560a58549afb7d2285 250 Gene3D G3DSA:1.25.40.10 133 250 1.9E-23 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_003911 45e1053a3b808d560a58549afb7d2285 250 SUPERFAMILY SSF48452 135 245 2.47E-13 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_003911 45e1053a3b808d560a58549afb7d2285 250 Pfam PF13432 Tetratricopeptide repeat 145 197 5.2E-7 T 13-10-2018 VEA_001014 3fa7f67e0c454fd1562e4b7afd612c5b 211 PIRSF PIRSF000190 1 211 3.2E-80 T 13-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VEA_001014 3fa7f67e0c454fd1562e4b7afd612c5b 211 Gene3D G3DSA:2.30.110.10 13 211 2.3E-75 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VEA_001014 3fa7f67e0c454fd1562e4b7afd612c5b 211 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 33 116 2.5E-22 T 13-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VEA_001014 3fa7f67e0c454fd1562e4b7afd612c5b 211 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 181 194 - T 13-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VEA_001014 3fa7f67e0c454fd1562e4b7afd612c5b 211 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 171 211 6.7E-19 T 13-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VEA_001014 3fa7f67e0c454fd1562e4b7afd612c5b 211 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 9 211 37.522 T 13-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VEA_001014 3fa7f67e0c454fd1562e4b7afd612c5b 211 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 1 211 5.1E-89 T 13-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VEA_001014 3fa7f67e0c454fd1562e4b7afd612c5b 211 SUPERFAMILY SSF50475 11 211 1.12E-63 T 13-10-2018 VEA_002197 91f7d94c24470e1b4ae47c32894521b9 154 Gene3D G3DSA:2.40.50.100 77 154 4.4E-32 T 13-10-2018 VEA_002197 91f7d94c24470e1b4ae47c32894521b9 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 100 114 5.4E-19 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 VEA_002197 91f7d94c24470e1b4ae47c32894521b9 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 83 96 5.4E-19 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 VEA_002197 91f7d94c24470e1b4ae47c32894521b9 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 115 128 5.4E-19 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 VEA_002197 91f7d94c24470e1b4ae47c32894521b9 154 SUPERFAMILY SSF51230 79 154 1.96E-26 T 13-10-2018 IPR011053 Single hybrid motif VEA_002197 91f7d94c24470e1b4ae47c32894521b9 154 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 110 127 - T 13-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VEA_002197 91f7d94c24470e1b4ae47c32894521b9 154 Pfam PF00364 Biotin-requiring enzyme 79 153 1.7E-25 T 13-10-2018 IPR000089 Biotin/lipoyl attachment VEA_002197 91f7d94c24470e1b4ae47c32894521b9 154 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 154 1.8E-63 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 VEA_001225 b582021b49bad2ecc818d862783ed7c6 299 Pfam PF03466 LysR substrate binding domain 88 291 8.5E-42 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_001225 b582021b49bad2ecc818d862783ed7c6 299 SUPERFAMILY SSF53850 88 292 2.53E-42 T 13-10-2018 VEA_001225 b582021b49bad2ecc818d862783ed7c6 299 Gene3D G3DSA:1.10.10.10 1 85 6.5E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001225 b582021b49bad2ecc818d862783ed7c6 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 3.7E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_001225 b582021b49bad2ecc818d862783ed7c6 299 SUPERFAMILY SSF46785 1 87 1.72E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_001225 b582021b49bad2ecc818d862783ed7c6 299 Gene3D G3DSA:3.40.190.290 90 291 1.6E-60 T 13-10-2018 VEA_001251 da1b8020f4becfa6b4da3fbd6c1ffcb9 267 SMART SM00422 10 79 8.0E-18 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEA_001251 da1b8020f4becfa6b4da3fbd6c1ffcb9 267 SUPERFAMILY SSF46955 10 98 1.1E-16 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily VEA_001251 da1b8020f4becfa6b4da3fbd6c1ffcb9 267 Pfam PF13411 MerR HTH family regulatory protein 10 76 2.7E-17 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEA_001251 da1b8020f4becfa6b4da3fbd6c1ffcb9 267 Gene3D G3DSA:1.10.1660.10 4 76 1.6E-24 T 13-10-2018 VEA_004203 cab19041e48d61d9c56654756d7f3cb5 362 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VEA_004203 cab19041e48d61d9c56654756d7f3cb5 362 SMART SM00937 67 180 2.3E-68 T 13-10-2018 IPR005139 Peptide chain release factor GO:0006415 VEA_004203 cab19041e48d61d9c56654756d7f3cb5 362 Pfam PF03462 PCRF domain 13 205 1.5E-77 T 13-10-2018 IPR005139 Peptide chain release factor GO:0006415 VEA_004203 cab19041e48d61d9c56654756d7f3cb5 362 Pfam PF00472 RF-1 domain 218 323 9.9E-39 T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VEA_004203 cab19041e48d61d9c56654756d7f3cb5 362 Gene3D G3DSA:3.30.70.1660 115 343 3.1E-95 T 13-10-2018 VEA_004203 cab19041e48d61d9c56654756d7f3cb5 362 SUPERFAMILY SSF75620 12 355 1.44E-137 T 13-10-2018 VEA_004203 cab19041e48d61d9c56654756d7f3cb5 362 Gene3D G3DSA:3.30.160.20 212 293 3.1E-95 T 13-10-2018 VEA_004203 cab19041e48d61d9c56654756d7f3cb5 362 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 360 6.2E-171 T 13-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 VEA_004203 cab19041e48d61d9c56654756d7f3cb5 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 41.078 T 13-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 VEA_004203 cab19041e48d61d9c56654756d7f3cb5 362 Gene3D G3DSA:1.20.58.410 3 98 3.4E-9 T 13-10-2018 VEA_002679 0311b7fc6dbb090d816c7257d82f9587 343 TIGRFAM TIGR03536 DapD_gpp: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 343 3.9E-181 T 13-10-2018 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria KEGG: 00300+2.3.1.117 VEA_002679 0311b7fc6dbb090d816c7257d82f9587 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 253 285 1.1E-11 T 13-10-2018 IPR001451 Hexapeptide repeat VEA_002679 0311b7fc6dbb090d816c7257d82f9587 343 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 131 171 2.2E-16 T 13-10-2018 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 VEA_002679 0311b7fc6dbb090d816c7257d82f9587 343 SUPERFAMILY SSF51161 90 324 5.68E-35 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily VEA_002679 0311b7fc6dbb090d816c7257d82f9587 343 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 340 46.069 T 13-10-2018 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117 VEA_002679 0311b7fc6dbb090d816c7257d82f9587 343 Gene3D G3DSA:2.160.10.10 172 343 1.6E-69 T 13-10-2018 VEA_002679 0311b7fc6dbb090d816c7257d82f9587 343 Gene3D G3DSA:3.30.70.2010 1 130 7.5E-39 T 13-10-2018 VEA_002679 0311b7fc6dbb090d816c7257d82f9587 343 Gene3D G3DSA:3.30.60.70 131 171 1.2E-20 T 13-10-2018 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily KEGG: 00300+2.3.1.117 VEA_004483 8c8b4b51e7f6b6054844b88776832c22 909 SMART SM00958 228 359 1.1E-80 T 13-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 VEA_004483 8c8b4b51e7f6b6054844b88776832c22 909 Pfam PF07516 SecA Wing and Scaffold domain 617 829 3.5E-66 T 13-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 VEA_004483 8c8b4b51e7f6b6054844b88776832c22 909 SUPERFAMILY SSF52540 418 610 1.48E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_004483 8c8b4b51e7f6b6054844b88776832c22 909 SMART SM00957 6 403 0.0 T 13-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 VEA_004483 8c8b4b51e7f6b6054844b88776832c22 909 Gene3D G3DSA:3.90.1440.10 229 369 1.9E-176 T 13-10-2018 VEA_004483 8c8b4b51e7f6b6054844b88776832c22 909 Gene3D G3DSA:3.40.50.300 418 620 3.7E-87 T 13-10-2018 VEA_004483 8c8b4b51e7f6b6054844b88776832c22 909 Gene3D G3DSA:1.10.3060.10 621 833 6.4E-76 T 13-10-2018 VEA_004483 8c8b4b51e7f6b6054844b88776832c22 909 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 816 0.0 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VEA_004483 8c8b4b51e7f6b6054844b88776832c22 909 ProSitePatterns PS01312 SecA family signature. 501 516 - T 13-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 VEA_004483 8c8b4b51e7f6b6054844b88776832c22 909 Pfam PF07517 SecA DEAD-like domain 7 403 3.4E-134 T 13-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 VEA_004483 8c8b4b51e7f6b6054844b88776832c22 909 SUPERFAMILY SSF52540 5 416 3.72E-86 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_004483 8c8b4b51e7f6b6054844b88776832c22 909 Pfam PF02810 SEC-C motif 889 907 3.3E-10 T 13-10-2018 IPR004027 SEC-C motif VEA_004483 8c8b4b51e7f6b6054844b88776832c22 909 Pfam PF01043 SecA preprotein cross-linking domain 232 359 4.9E-38 T 13-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 VEA_004483 8c8b4b51e7f6b6054844b88776832c22 909 PRINTS PR00906 SecA protein signature 117 127 1.2E-72 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VEA_004483 8c8b4b51e7f6b6054844b88776832c22 909 PRINTS PR00906 SecA protein signature 340 362 1.2E-72 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VEA_004483 8c8b4b51e7f6b6054844b88776832c22 909 PRINTS PR00906 SecA protein signature 414 427 1.2E-72 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VEA_004483 8c8b4b51e7f6b6054844b88776832c22 909 PRINTS PR00906 SecA protein signature 63 87 1.2E-72 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VEA_004483 8c8b4b51e7f6b6054844b88776832c22 909 PRINTS PR00906 SecA protein signature 170 190 1.2E-72 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VEA_004483 8c8b4b51e7f6b6054844b88776832c22 909 PRINTS PR00906 SecA protein signature 377 394 1.2E-72 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VEA_004483 8c8b4b51e7f6b6054844b88776832c22 909 PRINTS PR00906 SecA protein signature 101 115 1.2E-72 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VEA_004483 8c8b4b51e7f6b6054844b88776832c22 909 Gene3D G3DSA:3.40.50.300 22 416 1.9E-176 T 13-10-2018 VEA_004483 8c8b4b51e7f6b6054844b88776832c22 909 SUPERFAMILY SSF81767 227 369 2.22E-42 T 13-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 VEA_004483 8c8b4b51e7f6b6054844b88776832c22 909 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 20.059 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VEA_004483 8c8b4b51e7f6b6054844b88776832c22 909 SUPERFAMILY SSF81886 620 897 3.01E-83 T 13-10-2018 IPR036266 SecA, Wing/Scaffold superfamily VEA_004318 f58ff90ff21f813ad7f40d1d89717cf3 514 Gene3D G3DSA:3.40.630.30 6 224 5.4E-49 T 13-10-2018 VEA_004318 f58ff90ff21f813ad7f40d1d89717cf3 514 SUPERFAMILY SSF55729 8 143 2.06E-16 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_004318 f58ff90ff21f813ad7f40d1d89717cf3 514 Gene3D G3DSA:3.60.110.10 225 511 1.4E-60 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VEA_004318 f58ff90ff21f813ad7f40d1d89717cf3 514 Pfam PF00795 Carbon-nitrogen hydrolase 228 487 3.4E-34 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 VEA_004318 f58ff90ff21f813ad7f40d1d89717cf3 514 SUPERFAMILY SSF56317 225 494 5.89E-60 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VEA_004318 f58ff90ff21f813ad7f40d1d89717cf3 514 Pfam PF00583 Acetyltransferase (GNAT) family 50 141 3.8E-7 T 13-10-2018 IPR000182 GNAT domain VEA_002564 951d9b3ab59ea927fbcabd6f95e81271 287 SUPERFAMILY SSF52374 4 280 3.94E-86 T 13-10-2018 VEA_002564 951d9b3ab59ea927fbcabd6f95e81271 287 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 4 286 40.215 T 13-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 VEA_002564 951d9b3ab59ea927fbcabd6f95e81271 287 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 7 109 4.8E-29 T 13-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 VEA_002564 951d9b3ab59ea927fbcabd6f95e81271 287 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 126 238 1.4E-16 T 13-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 VEA_002564 951d9b3ab59ea927fbcabd6f95e81271 287 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 190 1.1E-13 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VEA_002564 951d9b3ab59ea927fbcabd6f95e81271 287 PRINTS PR00987 Glutamyl-tRNA synthetase signature 7 19 1.1E-13 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VEA_002564 951d9b3ab59ea927fbcabd6f95e81271 287 PRINTS PR00987 Glutamyl-tRNA synthetase signature 21 32 1.1E-13 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VEA_002564 951d9b3ab59ea927fbcabd6f95e81271 287 PRINTS PR00987 Glutamyl-tRNA synthetase signature 166 176 1.1E-13 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VEA_002564 951d9b3ab59ea927fbcabd6f95e81271 287 PRINTS PR00987 Glutamyl-tRNA synthetase signature 36 49 1.1E-13 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VEA_002564 951d9b3ab59ea927fbcabd6f95e81271 287 Gene3D G3DSA:3.40.50.620 4 280 4.2E-108 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_002564 951d9b3ab59ea927fbcabd6f95e81271 287 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 4 267 3.0E-112 T 13-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 VEA_002564 951d9b3ab59ea927fbcabd6f95e81271 287 Gene3D G3DSA:3.40.50.620 79 214 4.2E-108 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_002464 15b6a002c20b9bce67f57d75992d5896 231 Pfam PF04231 Endonuclease I 35 228 6.9E-46 T 13-10-2018 IPR007346 Endonuclease I GO:0004518 VEA_002464 15b6a002c20b9bce67f57d75992d5896 231 SUPERFAMILY SSF54060 20 228 6.36E-94 T 13-10-2018 VEA_000580 75fe230c4422fdd99c97f056affca5ea 431 SMART SM00388 211 276 2.2E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_000580 75fe230c4422fdd99c97f056affca5ea 431 SUPERFAMILY SSF55874 266 428 3.01E-38 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_000580 75fe230c4422fdd99c97f056affca5ea 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 383 5.1E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_000580 75fe230c4422fdd99c97f056affca5ea 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 427 5.1E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_000580 75fe230c4422fdd99c97f056affca5ea 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 408 5.1E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_000580 75fe230c4422fdd99c97f056affca5ea 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 355 369 5.1E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_000580 75fe230c4422fdd99c97f056affca5ea 431 Gene3D G3DSA:1.10.287.130 162 277 3.2E-23 T 13-10-2018 VEA_000580 75fe230c4422fdd99c97f056affca5ea 431 SUPERFAMILY SSF47384 194 276 5.49E-15 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEA_000580 75fe230c4422fdd99c97f056affca5ea 431 Pfam PF00512 His Kinase A (phospho-acceptor) domain 214 275 2.4E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_000580 75fe230c4422fdd99c97f056affca5ea 431 SUPERFAMILY SSF158472 159 208 6.54E-5 T 13-10-2018 VEA_000580 75fe230c4422fdd99c97f056affca5ea 431 SMART SM00387 320 430 6.7E-35 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_000580 75fe230c4422fdd99c97f056affca5ea 431 Gene3D G3DSA:3.30.565.10 281 429 6.4E-36 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_000580 75fe230c4422fdd99c97f056affca5ea 431 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 321 428 6.4E-23 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_000580 75fe230c4422fdd99c97f056affca5ea 431 SMART SM00304 158 210 2.5E-6 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_003663 7936bba0cfe49765f13e830600de4bf8 814 Gene3D G3DSA:1.10.1740.190 347 488 1.2E-34 T 13-10-2018 VEA_003663 7936bba0cfe49765f13e830600de4bf8 814 Gene3D G3DSA:1.10.390.20 489 612 1.7E-6 T 13-10-2018 VEA_003663 7936bba0cfe49765f13e830600de4bf8 814 SMART SM00089 611 693 5.1E-25 T 13-10-2018 IPR022409 PKD/Chitinase domain VEA_003663 7936bba0cfe49765f13e830600de4bf8 814 Gene3D G3DSA:2.60.40.10 613 691 1.8E-23 T 13-10-2018 IPR013783 Immunoglobulin-like fold VEA_003663 7936bba0cfe49765f13e830600de4bf8 814 SUPERFAMILY SSF49299 607 690 6.28E-20 T 13-10-2018 IPR035986 PKD domain superfamily VEA_003663 7936bba0cfe49765f13e830600de4bf8 814 Pfam PF08453 Peptidase family M9 N-terminal 78 258 1.1E-53 T 13-10-2018 IPR013661 Peptidase M9, collagenase, N-terminal domain VEA_003663 7936bba0cfe49765f13e830600de4bf8 814 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 144 162 1.8E-36 T 13-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 VEA_003663 7936bba0cfe49765f13e830600de4bf8 814 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 433 449 1.8E-36 T 13-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 VEA_003663 7936bba0cfe49765f13e830600de4bf8 814 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 415 429 1.8E-36 T 13-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 VEA_003663 7936bba0cfe49765f13e830600de4bf8 814 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 476 494 1.8E-36 T 13-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 VEA_003663 7936bba0cfe49765f13e830600de4bf8 814 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 498 513 1.8E-36 T 13-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 VEA_003663 7936bba0cfe49765f13e830600de4bf8 814 Pfam PF00801 PKD domain 619 682 3.9E-11 T 13-10-2018 IPR000601 PKD domain VEA_003663 7936bba0cfe49765f13e830600de4bf8 814 Pfam PF01752 Collagenase 317 600 1.7E-105 T 13-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 VEA_001479 97110dee112aad77ffdc256c5a917ba6 657 Gene3D G3DSA:3.30.300.30 532 656 1.8E-14 T 13-10-2018 VEA_001479 97110dee112aad77ffdc256c5a917ba6 657 Pfam PF00501 AMP-binding enzyme 106 532 2.8E-46 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VEA_001479 97110dee112aad77ffdc256c5a917ba6 657 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 6 652 1.2E-236 T 13-10-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 VEA_001479 97110dee112aad77ffdc256c5a917ba6 657 Pfam PF13193 AMP-binding enzyme C-terminal domain 546 620 1.3E-5 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VEA_001479 97110dee112aad77ffdc256c5a917ba6 657 SUPERFAMILY SSF56801 33 650 5.89E-124 T 13-10-2018 VEA_001479 97110dee112aad77ffdc256c5a917ba6 657 Gene3D G3DSA:3.40.50.12780 67 528 2.3E-57 T 13-10-2018 VEA_001479 97110dee112aad77ffdc256c5a917ba6 657 ProSitePatterns PS00455 Putative AMP-binding domain signature. 277 288 - T 13-10-2018 IPR020845 AMP-binding, conserved site VEA_000227 157992e63732c366904d659e80f6f267 353 Gene3D G3DSA:2.40.50.100 57 189 3.4E-61 T 13-10-2018 VEA_000227 157992e63732c366904d659e80f6f267 353 Gene3D G3DSA:1.10.287.470 91 149 3.4E-61 T 13-10-2018 VEA_000227 157992e63732c366904d659e80f6f267 353 Gene3D G3DSA:2.40.30.170 43 269 3.4E-61 T 13-10-2018 VEA_000227 157992e63732c366904d659e80f6f267 353 Pfam PF13533 Biotin-lipoyl like 58 104 1.0E-8 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VEA_000227 157992e63732c366904d659e80f6f267 353 Pfam PF13437 HlyD family secretion protein 155 259 1.6E-4 T 13-10-2018 VEA_000227 157992e63732c366904d659e80f6f267 353 SUPERFAMILY SSF111369 48 267 1.31E-24 T 13-10-2018 VEA_000227 157992e63732c366904d659e80f6f267 353 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 348 6.4E-55 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VEA_000227 157992e63732c366904d659e80f6f267 353 Gene3D G3DSA:2.40.420.20 270 346 3.4E-61 T 13-10-2018 VEA_004109 a858394863a4070255c48dd37c36f51f 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 13-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site VEA_004109 a858394863a4070255c48dd37c36f51f 290 SMART SM00881 4 100 6.0E-36 T 13-10-2018 IPR003781 CoA-binding GO:0048037 VEA_004109 a858394863a4070255c48dd37c36f51f 290 SUPERFAMILY SSF52210 123 285 1.31E-55 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VEA_004109 a858394863a4070255c48dd37c36f51f 290 SUPERFAMILY SSF51735 1 122 4.5E-43 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_004109 a858394863a4070255c48dd37c36f51f 290 Pfam PF00549 CoA-ligase 151 271 3.4E-22 T 13-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VEA_004109 a858394863a4070255c48dd37c36f51f 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 287 3.1E-146 T 13-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VEA_004109 a858394863a4070255c48dd37c36f51f 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 2.0E-40 T 13-10-2018 VEA_004109 a858394863a4070255c48dd37c36f51f 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 2.0E-40 T 13-10-2018 VEA_004109 a858394863a4070255c48dd37c36f51f 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 2.0E-40 T 13-10-2018 VEA_004109 a858394863a4070255c48dd37c36f51f 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 2.0E-40 T 13-10-2018 VEA_004109 a858394863a4070255c48dd37c36f51f 290 Gene3D G3DSA:3.40.50.720 2 123 1.1E-51 T 13-10-2018 VEA_004109 a858394863a4070255c48dd37c36f51f 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 13-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site VEA_004109 a858394863a4070255c48dd37c36f51f 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.491 T 13-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VEA_004109 a858394863a4070255c48dd37c36f51f 290 Gene3D G3DSA:3.40.50.261 124 288 6.0E-76 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VEA_004109 a858394863a4070255c48dd37c36f51f 290 PIRSF PIRSF001553 1 289 1.1E-134 T 13-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VEA_004109 a858394863a4070255c48dd37c36f51f 290 Pfam PF02629 CoA binding domain 6 99 3.1E-31 T 13-10-2018 IPR003781 CoA-binding GO:0048037 VEA_003004 f4e3bd9e549a63c577190ea8ee72b9e2 476 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 412 429 - T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VEA_003004 f4e3bd9e549a63c577190ea8ee72b9e2 476 Pfam PF00367 phosphotransferase system, EIIB 402 434 7.3E-12 T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VEA_003004 f4e3bd9e549a63c577190ea8ee72b9e2 476 Gene3D G3DSA:3.30.1360.60 396 475 4.7E-28 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VEA_003004 f4e3bd9e549a63c577190ea8ee72b9e2 476 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 473 3.7E-196 T 13-10-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0016021|GO:1904659 VEA_003004 f4e3bd9e549a63c577190ea8ee72b9e2 476 Pfam PF02378 Phosphotransferase system, EIIC 13 318 1.3E-74 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VEA_003004 f4e3bd9e549a63c577190ea8ee72b9e2 476 SUPERFAMILY SSF55604 402 472 3.01E-19 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VEA_003004 f4e3bd9e549a63c577190ea8ee72b9e2 476 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 375 458 8.4E-20 T 13-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VEA_002247 a48e5e449edaf2e9f1686e8782552ece 510 Gene3D G3DSA:3.40.720.10 6 509 2.4E-210 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VEA_002247 a48e5e449edaf2e9f1686e8782552ece 510 Pfam PF01676 Metalloenzyme superfamily 5 498 4.3E-81 T 13-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 VEA_002247 a48e5e449edaf2e9f1686e8782552ece 510 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 508 2.7E-229 T 13-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEA_002247 a48e5e449edaf2e9f1686e8782552ece 510 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 83 297 1.0E-80 T 13-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEA_002247 a48e5e449edaf2e9f1686e8782552ece 510 Gene3D G3DSA:3.40.1450.10 78 310 2.4E-210 T 13-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEA_002247 a48e5e449edaf2e9f1686e8782552ece 510 SUPERFAMILY SSF53649 4 509 3.01E-76 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VEA_002247 a48e5e449edaf2e9f1686e8782552ece 510 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 5 510 49.478 T 13-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEA_002247 a48e5e449edaf2e9f1686e8782552ece 510 PIRSF PIRSF001492 1 510 3.6E-202 T 13-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEA_002247 a48e5e449edaf2e9f1686e8782552ece 510 SUPERFAMILY SSF64158 78 308 3.79E-81 T 13-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEA_000282 dbab17f89710c2437ece90abd8411764 202 SUPERFAMILY SSF46894 129 191 1.29E-15 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEA_000282 dbab17f89710c2437ece90abd8411764 202 Gene3D G3DSA:3.40.50.2300 3 128 4.4E-19 T 13-10-2018 VEA_000282 dbab17f89710c2437ece90abd8411764 202 Pfam PF00196 Bacterial regulatory proteins, luxR family 137 190 2.5E-16 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_000282 dbab17f89710c2437ece90abd8411764 202 SUPERFAMILY SSF52172 3 128 2.28E-20 T 13-10-2018 IPR011006 CheY-like superfamily VEA_000282 dbab17f89710c2437ece90abd8411764 202 SMART SM00421 135 192 9.0E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_000282 dbab17f89710c2437ece90abd8411764 202 Pfam PF00072 Response regulator receiver domain 4 115 5.6E-19 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_000282 dbab17f89710c2437ece90abd8411764 202 ProSitePatterns PS00622 LuxR-type HTH domain signature. 152 179 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_000282 dbab17f89710c2437ece90abd8411764 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 168 2.9E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_000282 dbab17f89710c2437ece90abd8411764 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 180 2.9E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_000282 dbab17f89710c2437ece90abd8411764 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 152 2.9E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_000282 dbab17f89710c2437ece90abd8411764 202 Gene3D G3DSA:1.10.10.10 129 193 1.7E-14 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000282 dbab17f89710c2437ece90abd8411764 202 SMART SM00448 2 115 1.5E-13 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_001580 5969b8c9f7a1d371b0752a4fd30aaf41 2743 SMART SM00112 2116 2191 4.1E-12 T 13-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 VEA_001580 5969b8c9f7a1d371b0752a4fd30aaf41 2743 SMART SM00112 1207 1284 1.5E-15 T 13-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 VEA_001580 5969b8c9f7a1d371b0752a4fd30aaf41 2743 PRINTS PR00313 NodO calcium binding signature 2619 2627 2.0E-7 T 13-10-2018 VEA_001580 5969b8c9f7a1d371b0752a4fd30aaf41 2743 PRINTS PR00313 NodO calcium binding signature 2628 2637 2.0E-7 T 13-10-2018 VEA_001580 5969b8c9f7a1d371b0752a4fd30aaf41 2743 PRINTS PR00313 NodO calcium binding signature 2598 2609 2.0E-7 T 13-10-2018 VEA_001580 5969b8c9f7a1d371b0752a4fd30aaf41 2743 PRINTS PR00313 NodO calcium binding signature 2610 2618 2.0E-7 T 13-10-2018 VEA_001580 5969b8c9f7a1d371b0752a4fd30aaf41 2743 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2597 2615 - T 13-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VEA_001580 5969b8c9f7a1d371b0752a4fd30aaf41 2743 Gene3D G3DSA:2.60.40.60 1166 1282 1.2E-16 T 13-10-2018 VEA_001580 5969b8c9f7a1d371b0752a4fd30aaf41 2743 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 2649 2740 1.6E-14 T 13-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass VEA_001580 5969b8c9f7a1d371b0752a4fd30aaf41 2743 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 986 1079 8.0E-23 T 13-10-2018 IPR010221 VCBS repeat VEA_001580 5969b8c9f7a1d371b0752a4fd30aaf41 2743 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 579 671 4.8E-24 T 13-10-2018 IPR010221 VCBS repeat VEA_001580 5969b8c9f7a1d371b0752a4fd30aaf41 2743 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 680 773 5.7E-23 T 13-10-2018 IPR010221 VCBS repeat VEA_001580 5969b8c9f7a1d371b0752a4fd30aaf41 2743 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 272 365 1.3E-22 T 13-10-2018 IPR010221 VCBS repeat VEA_001580 5969b8c9f7a1d371b0752a4fd30aaf41 2743 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1088 1169 2.1E-21 T 13-10-2018 IPR010221 VCBS repeat VEA_001580 5969b8c9f7a1d371b0752a4fd30aaf41 2743 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 884 977 8.6E-24 T 13-10-2018 IPR010221 VCBS repeat VEA_001580 5969b8c9f7a1d371b0752a4fd30aaf41 2743 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 165 263 8.4E-24 T 13-10-2018 IPR010221 VCBS repeat VEA_001580 5969b8c9f7a1d371b0752a4fd30aaf41 2743 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 782 875 1.7E-22 T 13-10-2018 IPR010221 VCBS repeat VEA_001580 5969b8c9f7a1d371b0752a4fd30aaf41 2743 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 476 569 1.9E-23 T 13-10-2018 IPR010221 VCBS repeat VEA_001580 5969b8c9f7a1d371b0752a4fd30aaf41 2743 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 374 467 2.2E-23 T 13-10-2018 IPR010221 VCBS repeat VEA_001580 5969b8c9f7a1d371b0752a4fd30aaf41 2743 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 2001 2071 0.0027 T 13-10-2018 IPR010221 VCBS repeat VEA_001580 5969b8c9f7a1d371b0752a4fd30aaf41 2743 SUPERFAMILY SSF51120 2516 2697 6.28E-23 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VEA_001580 5969b8c9f7a1d371b0752a4fd30aaf41 2743 SMART SM00327 1728 1966 0.0052 T 13-10-2018 IPR002035 von Willebrand factor, type A VEA_001580 5969b8c9f7a1d371b0752a4fd30aaf41 2743 SMART SM00327 2206 2441 0.31 T 13-10-2018 IPR002035 von Willebrand factor, type A VEA_001580 5969b8c9f7a1d371b0752a4fd30aaf41 2743 Gene3D G3DSA:2.150.10.10 2576 2725 1.0E-23 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VEA_001580 5969b8c9f7a1d371b0752a4fd30aaf41 2743 Pfam PF13519 von Willebrand factor type A domain 1731 1849 1.8E-7 T 13-10-2018 IPR002035 von Willebrand factor, type A VEA_001580 5969b8c9f7a1d371b0752a4fd30aaf41 2743 Pfam PF00028 Cadherin domain 2101 2186 1.0E-10 T 13-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 VEA_001580 5969b8c9f7a1d371b0752a4fd30aaf41 2743 Pfam PF00028 Cadherin domain 1191 1275 3.0E-12 T 13-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 VEA_001580 5969b8c9f7a1d371b0752a4fd30aaf41 2743 Gene3D G3DSA:2.60.40.60 2095 2188 5.7E-16 T 13-10-2018 VEA_001580 5969b8c9f7a1d371b0752a4fd30aaf41 2743 SUPERFAMILY SSF49313 1189 1279 1.4E-14 T 13-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 VEA_001580 5969b8c9f7a1d371b0752a4fd30aaf41 2743 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2615 2633 - T 13-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VEA_001580 5969b8c9f7a1d371b0752a4fd30aaf41 2743 SUPERFAMILY SSF49313 2099 2186 1.08E-12 T 13-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 VEA_001580 5969b8c9f7a1d371b0752a4fd30aaf41 2743 SUPERFAMILY SSF53300 1730 1952 1.16E-10 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VEA_001580 5969b8c9f7a1d371b0752a4fd30aaf41 2743 SUPERFAMILY SSF53300 2210 2443 1.75E-7 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VEA_001580 5969b8c9f7a1d371b0752a4fd30aaf41 2743 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2606 2624 - T 13-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VEA_002174 74c9f9ef59eef108ce5467eab73e7294 1400 SUPERFAMILY SSF64484 16 1363 0.0 T 13-10-2018 VEA_002174 74c9f9ef59eef108ce5467eab73e7294 1400 Gene3D G3DSA:1.10.1790.20 1135 1313 3.5E-64 T 13-10-2018 VEA_002174 74c9f9ef59eef108ce5467eab73e7294 1400 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1314 1.1E-76 T 13-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEA_002174 74c9f9ef59eef108ce5467eab73e7294 1400 Gene3D G3DSA:1.10.150.390 1315 1376 1.0E-28 T 13-10-2018 VEA_002174 74c9f9ef59eef108ce5467eab73e7294 1400 Gene3D G3DSA:1.10.132.30 641 790 6.3E-66 T 13-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEA_002174 74c9f9ef59eef108ce5467eab73e7294 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 395 4.5E-8 T 13-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEA_002174 74c9f9ef59eef108ce5467eab73e7294 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 1.9E-27 T 13-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEA_002174 74c9f9ef59eef108ce5467eab73e7294 1400 Gene3D G3DSA:1.10.274.100 490 640 2.4E-40 T 13-10-2018 VEA_002174 74c9f9ef59eef108ce5467eab73e7294 1400 Gene3D G3DSA:2.40.50.100 948 1021 1.5E-21 T 13-10-2018 VEA_002174 74c9f9ef59eef108ce5467eab73e7294 1400 Gene3D G3DSA:1.10.40.90 374 416 3.1E-22 T 13-10-2018 VEA_002174 74c9f9ef59eef108ce5467eab73e7294 1400 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1376 18.985 T 13-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEA_002174 74c9f9ef59eef108ce5467eab73e7294 1400 SMART SM00663 235 514 1.1E-184 T 13-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEA_002174 74c9f9ef59eef108ce5467eab73e7294 1400 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 3.7E-87 T 13-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEA_002174 74c9f9ef59eef108ce5467eab73e7294 1400 Gene3D G3DSA:2.40.50.100 1151 1214 3.5E-64 T 13-10-2018 VEA_002174 74c9f9ef59eef108ce5467eab73e7294 1400 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 5.0E-19 T 13-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEA_002174 74c9f9ef59eef108ce5467eab73e7294 1400 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1366 0.0 T 13-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEA_002174 74c9f9ef59eef108ce5467eab73e7294 1400 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 1.2E-27 T 13-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEA_002174 74c9f9ef59eef108ce5467eab73e7294 1400 Gene3D G3DSA:2.40.50.100 1022 1126 1.0E-28 T 13-10-2018 VEA_002792 c7e98d41682aef24940b87bcded540a3 180 SUPERFAMILY SSF55021 90 176 2.96E-21 T 13-10-2018 VEA_002792 c7e98d41682aef24940b87bcded540a3 180 PIRSF PIRSF028103 1 178 8.7E-69 T 13-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 VEA_002792 c7e98d41682aef24940b87bcded540a3 180 Gene3D G3DSA:3.30.70.260 87 180 1.2E-40 T 13-10-2018 VEA_002792 c7e98d41682aef24940b87bcded540a3 180 Pfam PF13740 ACT domain 3 78 3.1E-22 T 13-10-2018 VEA_002792 c7e98d41682aef24940b87bcded540a3 180 SUPERFAMILY SSF55021 1 82 1.04E-17 T 13-10-2018 VEA_002792 c7e98d41682aef24940b87bcded540a3 180 Gene3D G3DSA:3.30.70.260 1 85 1.6E-24 T 13-10-2018 VEA_004464 0c63ad6adf405cf2420fa94e09ad8a75 582 SMART SM00267 402 578 1.0E-61 T 13-10-2018 IPR000160 GGDEF domain VEA_004464 0c63ad6adf405cf2420fa94e09ad8a75 582 SUPERFAMILY SSF55785 149 252 9.25E-5 T 13-10-2018 IPR035965 PAS domain superfamily VEA_004464 0c63ad6adf405cf2420fa94e09ad8a75 582 SMART SM00091 158 224 20.0 T 13-10-2018 IPR000014 PAS domain VEA_004464 0c63ad6adf405cf2420fa94e09ad8a75 582 SMART SM00091 280 347 0.0041 T 13-10-2018 IPR000014 PAS domain VEA_004464 0c63ad6adf405cf2420fa94e09ad8a75 582 SMART SM00091 38 104 16.0 T 13-10-2018 IPR000014 PAS domain VEA_004464 0c63ad6adf405cf2420fa94e09ad8a75 582 Pfam PF13188 PAS domain 40 85 2.1E-4 T 13-10-2018 IPR000014 PAS domain VEA_004464 0c63ad6adf405cf2420fa94e09ad8a75 582 SUPERFAMILY SSF55785 267 393 2.79E-19 T 13-10-2018 IPR035965 PAS domain superfamily VEA_004464 0c63ad6adf405cf2420fa94e09ad8a75 582 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 277 402 8.7E-15 T 13-10-2018 IPR000014 PAS domain VEA_004464 0c63ad6adf405cf2420fa94e09ad8a75 582 Pfam PF08448 PAS fold 286 396 3.5E-14 T 13-10-2018 IPR013656 PAS fold-4 VEA_004464 0c63ad6adf405cf2420fa94e09ad8a75 582 SUPERFAMILY SSF55073 418 578 2.35E-46 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_004464 0c63ad6adf405cf2420fa94e09ad8a75 582 Gene3D G3DSA:3.30.450.20 144 260 1.5E-5 T 13-10-2018 VEA_004464 0c63ad6adf405cf2420fa94e09ad8a75 582 Pfam PF00990 Diguanylate cyclase, GGDEF domain 414 574 1.5E-49 T 13-10-2018 IPR000160 GGDEF domain VEA_004464 0c63ad6adf405cf2420fa94e09ad8a75 582 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 409 576 4.9E-49 T 13-10-2018 IPR000160 GGDEF domain VEA_004464 0c63ad6adf405cf2420fa94e09ad8a75 582 Gene3D G3DSA:3.30.450.20 264 408 3.1E-24 T 13-10-2018 VEA_004464 0c63ad6adf405cf2420fa94e09ad8a75 582 Gene3D G3DSA:3.30.70.270 415 581 7.7E-52 T 13-10-2018 VEA_002485 30f075382ecebda815c4af368c1e2c67 402 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 13-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 VEA_002485 30f075382ecebda815c4af368c1e2c67 402 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 391 4.3E-138 T 13-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 VEA_002485 30f075382ecebda815c4af368c1e2c67 402 Pfam PF01494 FAD binding domain 5 348 5.5E-29 T 13-10-2018 IPR002938 FAD-binding domain GO:0071949 VEA_002485 30f075382ecebda815c4af368c1e2c67 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 1.8E-18 T 13-10-2018 VEA_002485 30f075382ecebda815c4af368c1e2c67 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 1.8E-18 T 13-10-2018 VEA_002485 30f075382ecebda815c4af368c1e2c67 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 1.8E-18 T 13-10-2018 VEA_002485 30f075382ecebda815c4af368c1e2c67 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 1.8E-18 T 13-10-2018 VEA_002485 30f075382ecebda815c4af368c1e2c67 402 Gene3D G3DSA:3.30.9.50 80 270 5.9E-124 T 13-10-2018 VEA_002485 30f075382ecebda815c4af368c1e2c67 402 SUPERFAMILY SSF51905 5 385 8.49E-59 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_002485 30f075382ecebda815c4af368c1e2c67 402 Gene3D G3DSA:3.50.50.60 6 339 5.9E-124 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_003106 3f8d75a4b8ca4729c59008c4c1640cc4 410 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 410 101.696 T 13-10-2018 IPR008135 Competence-induced protein CinA VEA_003106 3f8d75a4b8ca4729c59008c4c1640cc4 410 Gene3D G3DSA:3.40.980.10 1 171 5.1E-43 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily VEA_003106 3f8d75a4b8ca4729c59008c4c1640cc4 410 Pfam PF00994 Probable molybdopterin binding domain 4 169 1.5E-28 T 13-10-2018 IPR001453 MoaB/Mog domain VEA_003106 3f8d75a4b8ca4729c59008c4c1640cc4 410 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 2 404 2.6E-76 T 13-10-2018 IPR008135 Competence-induced protein CinA VEA_003106 3f8d75a4b8ca4729c59008c4c1640cc4 410 SMART SM00852 4 171 7.6E-31 T 13-10-2018 IPR001453 MoaB/Mog domain VEA_003106 3f8d75a4b8ca4729c59008c4c1640cc4 410 PIRSF PIRSF006728 1 391 1.3E-113 T 13-10-2018 IPR008135 Competence-induced protein CinA VEA_003106 3f8d75a4b8ca4729c59008c4c1640cc4 410 SUPERFAMILY SSF53218 2 204 7.59E-34 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily VEA_003106 3f8d75a4b8ca4729c59008c4c1640cc4 410 SUPERFAMILY SSF142433 252 386 1.57E-8 T 13-10-2018 IPR036653 CinA-like, C-terminal VEA_001149 ddee95ec21dfeecd08841b9025b75042 322 SUPERFAMILY SSF53850 98 314 4.71E-24 T 13-10-2018 VEA_001149 ddee95ec21dfeecd08841b9025b75042 322 SUPERFAMILY SSF46785 6 85 9.87E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_001149 ddee95ec21dfeecd08841b9025b75042 322 Gene3D G3DSA:1.10.10.10 1 90 2.4E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001149 ddee95ec21dfeecd08841b9025b75042 322 Gene3D G3DSA:3.40.190.10 98 310 2.4E-26 T 13-10-2018 VEA_001149 ddee95ec21dfeecd08841b9025b75042 322 Gene3D G3DSA:3.40.190.10 180 281 2.4E-26 T 13-10-2018 VEA_001149 ddee95ec21dfeecd08841b9025b75042 322 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 2.2E-13 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_001149 ddee95ec21dfeecd08841b9025b75042 322 Pfam PF03466 LysR substrate binding domain 99 312 1.6E-10 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_001524 64a9faf4609304a6702cb46797e8bc55 667 Pfam PF00575 S1 RNA binding domain 564 645 5.5E-9 T 13-10-2018 IPR003029 S1 domain GO:0003676 VEA_001524 64a9faf4609304a6702cb46797e8bc55 667 SUPERFAMILY SSF50249 567 649 8.36E-19 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_001524 64a9faf4609304a6702cb46797e8bc55 667 Pfam PF08206 Ribonuclease B OB domain 24 78 2.1E-16 T 13-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain VEA_001524 64a9faf4609304a6702cb46797e8bc55 667 Gene3D G3DSA:2.40.50.640 83 157 4.4E-30 T 13-10-2018 VEA_001524 64a9faf4609304a6702cb46797e8bc55 667 SMART SM00955 193 523 4.5E-113 T 13-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 VEA_001524 64a9faf4609304a6702cb46797e8bc55 667 SUPERFAMILY SSF50249 192 563 4.51E-108 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_001524 64a9faf4609304a6702cb46797e8bc55 667 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 649 0.0 T 13-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 VEA_001524 64a9faf4609304a6702cb46797e8bc55 667 SUPERFAMILY SSF50249 8 80 3.83E-14 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_001524 64a9faf4609304a6702cb46797e8bc55 667 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 648 4.2E-181 T 13-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 VEA_001524 64a9faf4609304a6702cb46797e8bc55 667 SUPERFAMILY SSF50249 84 173 1.08E-24 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_001524 64a9faf4609304a6702cb46797e8bc55 667 SMART SM00357 23 79 1.6E-8 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 VEA_001524 64a9faf4609304a6702cb46797e8bc55 667 Pfam PF00773 RNB domain 193 521 1.6E-84 T 13-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 VEA_001524 64a9faf4609304a6702cb46797e8bc55 667 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 650 42.138 T 13-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 VEA_001524 64a9faf4609304a6702cb46797e8bc55 667 Gene3D G3DSA:2.40.50.140 565 651 1.4E-32 T 13-10-2018 VEA_001524 64a9faf4609304a6702cb46797e8bc55 667 ProSitePatterns PS01175 Ribonuclease II family signature. 490 514 - T 13-10-2018 IPR022966 Ribonuclease II/R, conserved site VEA_001524 64a9faf4609304a6702cb46797e8bc55 667 Gene3D G3DSA:2.40.50.140 1 82 1.5E-26 T 13-10-2018 VEA_003984 497e31786e442431da44882402d79781 251 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 47.148 T 13-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 VEA_003984 497e31786e442431da44882402d79781 251 Gene3D G3DSA:3.90.550.10 1 251 3.2E-97 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEA_003984 497e31786e442431da44882402d79781 251 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 1.3E-117 T 13-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 VEA_003984 497e31786e442431da44882402d79781 251 SUPERFAMILY SSF53448 1 249 1.55E-63 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEA_003984 497e31786e442431da44882402d79781 251 Pfam PF02348 Cytidylyltransferase 5 221 3.4E-66 T 13-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 VEA_000768 19826fc865c0a0cd8423de2d2436e13c 459 Pfam PF00202 Aminotransferase class-III 57 449 3.0E-85 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEA_000768 19826fc865c0a0cd8423de2d2436e13c 459 SUPERFAMILY SSF53383 57 450 1.27E-105 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_000768 19826fc865c0a0cd8423de2d2436e13c 459 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 265 302 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEA_000768 19826fc865c0a0cd8423de2d2436e13c 459 Gene3D G3DSA:3.40.640.10 89 348 1.8E-118 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_000768 19826fc865c0a0cd8423de2d2436e13c 459 Gene3D G3DSA:3.90.1150.10 61 444 1.8E-118 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEA_000768 19826fc865c0a0cd8423de2d2436e13c 459 PIRSF PIRSF000521 150 452 4.5E-19 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEA_000768 19826fc865c0a0cd8423de2d2436e13c 459 PIRSF PIRSF000521 5 158 5.3E-6 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEA_001261 3784dbca8ba62e39063d660995bce5e8 547 Pfam PF00672 HAMP domain 219 267 6.8E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_001261 3784dbca8ba62e39063d660995bce5e8 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 412 441 4.8E-7 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEA_001261 3784dbca8ba62e39063d660995bce5e8 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 299 328 4.8E-7 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEA_001261 3784dbca8ba62e39063d660995bce5e8 547 SUPERFAMILY SSF58104 239 547 1.83E-69 T 13-10-2018 VEA_001261 3784dbca8ba62e39063d660995bce5e8 547 Gene3D G3DSA:1.10.287.950 217 547 2.8E-69 T 13-10-2018 VEA_001261 3784dbca8ba62e39063d660995bce5e8 547 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 348 512 5.4E-41 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_001261 3784dbca8ba62e39063d660995bce5e8 547 SMART SM00304 218 270 2.6E-11 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_001261 3784dbca8ba62e39063d660995bce5e8 547 SMART SM00283 285 546 7.4E-66 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_002781 3da1fef3ba10ca8234de7a36c713f32a 346 Gene3D G3DSA:3.30.1330.10 7 171 2.3E-70 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VEA_002781 3da1fef3ba10ca8234de7a36c713f32a 346 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 335 1.2E-151 T 13-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VEA_002781 3da1fef3ba10ca8234de7a36c713f32a 346 SUPERFAMILY SSF56042 172 341 4.64E-62 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VEA_002781 3da1fef3ba10ca8234de7a36c713f32a 346 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 345 47.806 T 13-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VEA_002781 3da1fef3ba10ca8234de7a36c713f32a 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 60 165 9.2E-16 T 13-10-2018 IPR016188 PurM-like, N-terminal domain VEA_002781 3da1fef3ba10ca8234de7a36c713f32a 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 178 339 1.3E-40 T 13-10-2018 IPR010918 PurM-like, C-terminal domain VEA_002781 3da1fef3ba10ca8234de7a36c713f32a 346 SUPERFAMILY SSF55326 8 171 2.54E-54 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VEA_002781 3da1fef3ba10ca8234de7a36c713f32a 346 Gene3D G3DSA:3.90.650.10 172 346 1.5E-73 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VEA_004442 7d97fac45fd8a1fe5b33ef238077b6a9 172 SUPERFAMILY SSF52218 1 167 4.69E-49 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VEA_004442 7d97fac45fd8a1fe5b33ef238077b6a9 172 Gene3D G3DSA:3.40.50.360 1 172 1.0E-50 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VEA_004442 7d97fac45fd8a1fe5b33ef238077b6a9 172 TIGRFAM TIGR01752 flav_long: flavodoxin 2 168 1.2E-68 T 13-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 VEA_004442 7d97fac45fd8a1fe5b33ef238077b6a9 172 PIRSF PIRSF038996 1 171 7.7E-60 T 13-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 VEA_004442 7d97fac45fd8a1fe5b33ef238077b6a9 172 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 13-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 VEA_004442 7d97fac45fd8a1fe5b33ef238077b6a9 172 Pfam PF00258 Flavodoxin 5 160 1.1E-27 T 13-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VEA_003915 d4fea16866a7f3abda055146d995bcb9 147 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 5 144 28.167 T 13-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 VEA_003915 d4fea16866a7f3abda055146d995bcb9 147 Gene3D G3DSA:3.30.420.270 63 136 5.8E-16 T 13-10-2018 VEA_003915 d4fea16866a7f3abda055146d995bcb9 147 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 144 1.0E-25 T 13-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 VEA_002448 ba3cc084f4e4adba0bdbd8cf9b7a9e0b 342 SUPERFAMILY SSF53335 107 316 1.39E-21 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_002448 ba3cc084f4e4adba0bdbd8cf9b7a9e0b 342 Pfam PF01170 Putative RNA methylase family UPF0020 133 295 1.7E-13 T 13-10-2018 IPR000241 Putative RNA methylase domain VEA_000126 012a17e3e04c4934a73ee5b97580fbe1 518 Gene3D G3DSA:3.40.50.720 143 324 9.1E-157 T 13-10-2018 VEA_000126 012a17e3e04c4934a73ee5b97580fbe1 518 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 13-10-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 VEA_000126 012a17e3e04c4934a73ee5b97580fbe1 518 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 147 374 6.3E-75 T 13-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VEA_000126 012a17e3e04c4934a73ee5b97580fbe1 518 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 433 516 2.1E-36 T 13-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 VEA_000126 012a17e3e04c4934a73ee5b97580fbe1 518 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 516 9.0E-272 T 13-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 VEA_000126 012a17e3e04c4934a73ee5b97580fbe1 518 SUPERFAMILY SSF52283 2 174 4.25E-51 T 13-10-2018 VEA_000126 012a17e3e04c4934a73ee5b97580fbe1 518 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 143 2.6E-46 T 13-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VEA_000126 012a17e3e04c4934a73ee5b97580fbe1 518 Gene3D G3DSA:3.40.50.720 3 371 9.1E-157 T 13-10-2018 VEA_000126 012a17e3e04c4934a73ee5b97580fbe1 518 PIRSF PIRSF000203 1 516 4.8E-269 T 13-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 VEA_000126 012a17e3e04c4934a73ee5b97580fbe1 518 SMART SM01002 152 317 3.6E-83 T 13-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VEA_000126 012a17e3e04c4934a73ee5b97580fbe1 518 SUPERFAMILY SSF51735 143 319 2.66E-37 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_000126 012a17e3e04c4934a73ee5b97580fbe1 518 SMART SM01003 4 143 1.4E-67 T 13-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VEA_001013 a29159ab49646c98f9bf516d41720a1e 624 SUPERFAMILY SSF55874 457 613 5.65E-31 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_001013 a29159ab49646c98f9bf516d41720a1e 624 Pfam PF02743 Cache domain 49 233 1.6E-15 T 13-10-2018 IPR033479 Double Cache domain 1 VEA_001013 a29159ab49646c98f9bf516d41720a1e 624 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 500 609 3.4E-16 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_001013 a29159ab49646c98f9bf516d41720a1e 624 Gene3D G3DSA:3.30.450.20 68 186 3.0E-59 T 13-10-2018 VEA_001013 a29159ab49646c98f9bf516d41720a1e 624 Gene3D G3DSA:1.10.287.130 351 448 1.9E-15 T 13-10-2018 VEA_001013 a29159ab49646c98f9bf516d41720a1e 624 PRINTS PR00344 Bacterial sensor protein C-terminal signature 555 565 9.6E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_001013 a29159ab49646c98f9bf516d41720a1e 624 PRINTS PR00344 Bacterial sensor protein C-terminal signature 566 584 9.6E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_001013 a29159ab49646c98f9bf516d41720a1e 624 PRINTS PR00344 Bacterial sensor protein C-terminal signature 537 551 9.6E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_001013 a29159ab49646c98f9bf516d41720a1e 624 PRINTS PR00344 Bacterial sensor protein C-terminal signature 595 608 9.6E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_001013 a29159ab49646c98f9bf516d41720a1e 624 PIRSF PIRSF036431 3 618 1.1E-189 T 13-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) VEA_001013 a29159ab49646c98f9bf516d41720a1e 624 Gene3D G3DSA:3.30.565.10 460 611 2.6E-32 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_001013 a29159ab49646c98f9bf516d41720a1e 624 SMART SM00387 497 611 7.6E-25 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_001013 a29159ab49646c98f9bf516d41720a1e 624 SUPERFAMILY SSF103190 66 195 1.73E-17 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VEA_001013 a29159ab49646c98f9bf516d41720a1e 624 Gene3D G3DSA:3.30.450.20 56 279 3.0E-59 T 13-10-2018 VEA_001013 a29159ab49646c98f9bf516d41720a1e 624 SUPERFAMILY SSF47384 370 450 2.16E-7 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEA_002115 3042b4741a1cbdba6337d9604b6c264d 828 SUPERFAMILY SSF141868 598 825 7.06E-56 T 13-10-2018 IPR035919 EAL domain superfamily VEA_002115 3042b4741a1cbdba6337d9604b6c264d 828 SMART SM00052 590 828 8.2E-31 T 13-10-2018 IPR001633 EAL domain VEA_002115 3042b4741a1cbdba6337d9604b6c264d 828 SMART SM01204 215 341 3.2E-18 T 13-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 VEA_002115 3042b4741a1cbdba6337d9604b6c264d 828 Pfam PF10442 FIST C domain 215 338 3.7E-12 T 13-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 VEA_002115 3042b4741a1cbdba6337d9604b6c264d 828 Pfam PF00563 EAL domain 599 824 5.7E-56 T 13-10-2018 IPR001633 EAL domain VEA_002115 3042b4741a1cbdba6337d9604b6c264d 828 Pfam PF08495 FIST N domain 30 211 8.7E-18 T 13-10-2018 IPR013702 FIST domain, N-terminal VEA_002115 3042b4741a1cbdba6337d9604b6c264d 828 SMART SM00267 402 572 0.007 T 13-10-2018 IPR000160 GGDEF domain VEA_002115 3042b4741a1cbdba6337d9604b6c264d 828 SMART SM00897 27 214 4.0E-26 T 13-10-2018 IPR013702 FIST domain, N-terminal VEA_002115 3042b4741a1cbdba6337d9604b6c264d 828 Gene3D G3DSA:3.20.20.450 595 828 1.3E-57 T 13-10-2018 IPR035919 EAL domain superfamily VEA_002115 3042b4741a1cbdba6337d9604b6c264d 828 SUPERFAMILY SSF55073 419 525 5.02E-8 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_002115 3042b4741a1cbdba6337d9604b6c264d 828 Gene3D G3DSA:3.30.70.270 399 567 1.2E-14 T 13-10-2018 VEA_002115 3042b4741a1cbdba6337d9604b6c264d 828 Pfam PF00990 Diguanylate cyclase, GGDEF domain 415 477 2.2E-6 T 13-10-2018 IPR000160 GGDEF domain VEA_002707 e64a021891418d47375dd298f322b94a 428 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 428 43.027 T 13-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 VEA_002707 e64a021891418d47375dd298f322b94a 428 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 428 5.4E-196 T 13-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 VEA_002707 e64a021891418d47375dd298f322b94a 428 Pfam PF11973 NQRA C-terminal domain 243 292 1.7E-21 T 13-10-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 VEA_002707 e64a021891418d47375dd298f322b94a 428 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 2 238 1.1E-102 T 13-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 VEA_001124 b03c90dd704586fce98334fc7dccefed 487 SUPERFAMILY SSF81296 24 203 2.38E-56 T 13-10-2018 IPR014756 Immunoglobulin E-set VEA_001124 b03c90dd704586fce98334fc7dccefed 487 Gene3D G3DSA:3.30.70.2150 209 316 1.2E-39 T 13-10-2018 VEA_001124 b03c90dd704586fce98334fc7dccefed 487 Gene3D G3DSA:2.70.50.50 24 202 3.7E-81 T 13-10-2018 VEA_001124 b03c90dd704586fce98334fc7dccefed 487 Gene3D G3DSA:2.60.40.2550 317 414 1.3E-39 T 13-10-2018 VEA_001124 b03c90dd704586fce98334fc7dccefed 487 Hamap MF_01905 GlcNAc-binding protein A [gbpA]. 3 486 56.707 T 13-10-2018 IPR020879 N-acetylglucosamine-binding protein A GO:0008061 VEA_001124 b03c90dd704586fce98334fc7dccefed 487 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 24 199 2.6E-35 T 13-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal VEA_000341 fb36f05eebf8cf9c09d0408185cf0823 501 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_000341 fb36f05eebf8cf9c09d0408185cf0823 501 Gene3D G3DSA:3.40.50.300 1 239 6.4E-57 T 13-10-2018 VEA_000341 fb36f05eebf8cf9c09d0408185cf0823 501 SUPERFAMILY SSF52540 5 228 5.21E-55 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000341 fb36f05eebf8cf9c09d0408185cf0823 501 Pfam PF00005 ABC transporter 270 423 1.1E-25 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_000341 fb36f05eebf8cf9c09d0408185cf0823 501 SMART SM00382 30 219 5.4E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_000341 fb36f05eebf8cf9c09d0408185cf0823 501 SMART SM00382 278 472 6.3E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_000341 fb36f05eebf8cf9c09d0408185cf0823 501 Pfam PF00005 ABC transporter 21 170 5.0E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_000341 fb36f05eebf8cf9c09d0408185cf0823 501 Gene3D G3DSA:3.40.50.300 266 497 3.8E-47 T 13-10-2018 VEA_000341 fb36f05eebf8cf9c09d0408185cf0823 501 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_000341 fb36f05eebf8cf9c09d0408185cf0823 501 SUPERFAMILY SSF52540 269 480 8.27E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002474 f8e551ed57b106ffc9e92862a4b4627f 288 Gene3D G3DSA:2.30.30.60 135 184 5.2E-23 T 13-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily VEA_002474 f8e551ed57b106ffc9e92862a4b4627f 288 Pfam PF00924 Mechanosensitive ion channel 77 274 5.8E-59 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VEA_002474 f8e551ed57b106ffc9e92862a4b4627f 288 SUPERFAMILY SSF50182 120 185 4.58E-18 T 13-10-2018 IPR010920 LSM domain superfamily VEA_002474 f8e551ed57b106ffc9e92862a4b4627f 288 Pfam PF05552 Conserved TM helix 21 69 1.6E-12 T 13-10-2018 IPR008910 Conserved TM helix VEA_002474 f8e551ed57b106ffc9e92862a4b4627f 288 SUPERFAMILY SSF82689 187 284 1.27E-34 T 13-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 VEA_002474 f8e551ed57b106ffc9e92862a4b4627f 288 Gene3D G3DSA:3.30.70.100 185 279 2.1E-28 T 13-10-2018 VEA_002474 f8e551ed57b106ffc9e92862a4b4627f 288 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 149 183 - T 13-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 VEA_002474 f8e551ed57b106ffc9e92862a4b4627f 288 SUPERFAMILY SSF82861 33 118 1.31E-17 T 13-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 VEA_003111 a9b8772688a1938a46f1628ac7ea7a62 906 Gene3D G3DSA:3.90.199.10 33 520 8.0E-237 T 13-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 VEA_003111 a9b8772688a1938a46f1628ac7ea7a62 906 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 864 0.0 T 13-10-2018 VEA_003111 a9b8772688a1938a46f1628ac7ea7a62 906 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 3.2E-158 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VEA_003111 a9b8772688a1938a46f1628ac7ea7a62 906 Gene3D G3DSA:3.30.1360.40 236 332 8.0E-237 T 13-10-2018 VEA_003111 a9b8772688a1938a46f1628ac7ea7a62 906 SUPERFAMILY SSF101904 532 873 2.49E-106 T 13-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal VEA_003111 a9b8772688a1938a46f1628ac7ea7a62 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 713 0.034 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VEA_003111 a9b8772688a1938a46f1628ac7ea7a62 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 767 812 2.4E-13 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VEA_003111 a9b8772688a1938a46f1628ac7ea7a62 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 735 761 1.1E-6 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VEA_003111 a9b8772688a1938a46f1628ac7ea7a62 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 688 8.7E-9 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VEA_003111 a9b8772688a1938a46f1628ac7ea7a62 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 636 1.3E-10 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VEA_003111 a9b8772688a1938a46f1628ac7ea7a62 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 817 863 8.0E-12 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VEA_003111 a9b8772688a1938a46f1628ac7ea7a62 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 583 2.2E-8 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VEA_003111 a9b8772688a1938a46f1628ac7ea7a62 906 SMART SM00434 11 498 5.7E-303 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VEA_003111 a9b8772688a1938a46f1628ac7ea7a62 906 Gene3D G3DSA:2.120.10.90 534 865 1.4E-122 T 13-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal VEA_003111 a9b8772688a1938a46f1628ac7ea7a62 906 SUPERFAMILY SSF56719 30 520 1.44E-187 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VEA_003111 a9b8772688a1938a46f1628ac7ea7a62 906 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 865 24.667 T 13-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VEA_003111 a9b8772688a1938a46f1628ac7ea7a62 906 Gene3D G3DSA:1.10.268.10 369 492 8.0E-237 T 13-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VEA_000142 a5f6ef3709cfbba05e06d1dcc66e73b5 461 Pfam PF05707 Zonular occludens toxin (Zot) 2 255 9.9E-78 T 13-10-2018 IPR008900 Zona occludens toxin VEA_001657 f754cc4dda59c1d0ea5d3aa47b89b224 363 SMART SM01329 7 356 1.5E-203 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 VEA_001657 f754cc4dda59c1d0ea5d3aa47b89b224 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 7 355 2.5E-165 T 13-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 VEA_001657 f754cc4dda59c1d0ea5d3aa47b89b224 363 Gene3D G3DSA:3.40.718.10 1 363 8.5E-158 T 13-10-2018 VEA_001657 f754cc4dda59c1d0ea5d3aa47b89b224 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 248 267 - T 13-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 VEA_001657 f754cc4dda59c1d0ea5d3aa47b89b224 363 SUPERFAMILY SSF53659 4 361 2.5E-123 T 13-10-2018 VEA_001657 f754cc4dda59c1d0ea5d3aa47b89b224 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 6 360 51.416 T 13-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 VEA_001657 f754cc4dda59c1d0ea5d3aa47b89b224 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 356 2.2E-137 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 VEA_001651 f946a028829f73c831ede0fa871a1d3c 319 Pfam PF03466 LysR substrate binding domain 121 306 8.9E-23 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_001651 f946a028829f73c831ede0fa871a1d3c 319 Gene3D G3DSA:1.10.10.10 14 104 2.9E-32 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001651 f946a028829f73c831ede0fa871a1d3c 319 SUPERFAMILY SSF53850 106 308 3.44E-39 T 13-10-2018 VEA_001651 f946a028829f73c831ede0fa871a1d3c 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 61 1.4E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_001651 f946a028829f73c831ede0fa871a1d3c 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 61 72 1.4E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_001651 f946a028829f73c831ede0fa871a1d3c 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_001651 f946a028829f73c831ede0fa871a1d3c 319 Gene3D G3DSA:3.40.190.10 187 283 3.8E-41 T 13-10-2018 VEA_001651 f946a028829f73c831ede0fa871a1d3c 319 SUPERFAMILY SSF46785 22 99 3.45E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_001651 f946a028829f73c831ede0fa871a1d3c 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 84 1.3E-18 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_001651 f946a028829f73c831ede0fa871a1d3c 319 Gene3D G3DSA:3.40.190.10 108 307 3.8E-41 T 13-10-2018 VEA_001737 f4391e6104c2106448fbc151e389915d 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.699 T 13-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001737 f4391e6104c2106448fbc151e389915d 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 13-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001737 f4391e6104c2106448fbc151e389915d 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 8.8E-40 T 13-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 VEA_001737 f4391e6104c2106448fbc151e389915d 110 SUPERFAMILY SSF54843 1 109 9.42E-45 T 13-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 VEA_001737 f4391e6104c2106448fbc151e389915d 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 1.8E-50 T 13-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001737 f4391e6104c2106448fbc151e389915d 110 Gene3D G3DSA:3.90.470.10 1 110 1.5E-48 T 13-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 VEA_000217 9e4e50baddaea144efa4feae3e01cc59 306 Gene3D G3DSA:1.10.3720.10 68 303 1.2E-50 T 13-10-2018 IPR035906 MetI-like superfamily VEA_000217 9e4e50baddaea144efa4feae3e01cc59 306 SUPERFAMILY SSF161098 72 290 4.32E-41 T 13-10-2018 IPR035906 MetI-like superfamily VEA_000217 9e4e50baddaea144efa4feae3e01cc59 306 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 71 143 1.3E-15 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VEA_000217 9e4e50baddaea144efa4feae3e01cc59 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 300 3.8E-22 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_004034 3e483cdd9023741874b2d30dd3b5cfd7 377 SUPERFAMILY SSF53383 3 373 1.77E-92 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_004034 3e483cdd9023741874b2d30dd3b5cfd7 377 Gene3D G3DSA:3.90.1150.10 1 371 1.1E-142 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEA_004034 3e483cdd9023741874b2d30dd3b5cfd7 377 Gene3D G3DSA:3.40.640.10 26 267 1.1E-142 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_004034 3e483cdd9023741874b2d30dd3b5cfd7 377 Pfam PF00155 Aminotransferase class I and II 34 363 1.1E-47 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VEA_003973 059c5c1c85591adfe91d89438c6d5736 256 PIRSF PIRSF039085 3 256 1.5E-116 T 13-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VEA_003973 059c5c1c85591adfe91d89438c6d5736 256 SMART SM00382 31 229 1.3E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_003973 059c5c1c85591adfe91d89438c6d5736 256 Gene3D G3DSA:3.40.50.300 4 255 2.3E-74 T 13-10-2018 VEA_003973 059c5c1c85591adfe91d89438c6d5736 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_003973 059c5c1c85591adfe91d89438c6d5736 256 SUPERFAMILY SSF52540 7 251 1.86E-74 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003973 059c5c1c85591adfe91d89438c6d5736 256 Pfam PF00005 ABC transporter 22 181 5.9E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_000710 22caf873ee25caea03426a5003ffa5c9 826 Gene3D G3DSA:2.70.98.10 39 403 2.6E-216 T 13-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 VEA_000710 22caf873ee25caea03426a5003ffa5c9 826 Gene3D G3DSA:1.20.1050.60 404 512 2.6E-216 T 13-10-2018 VEA_000710 22caf873ee25caea03426a5003ffa5c9 826 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 16 815 4.6E-165 T 13-10-2018 IPR005887 Alpha-1,2-mannosidase, putative VEA_000710 22caf873ee25caea03426a5003ffa5c9 826 Pfam PF07971 Glycosyl hydrolase family 92 281 815 5.4E-141 T 13-10-2018 IPR012939 Glycosyl hydrolase family 92 VEA_000710 22caf873ee25caea03426a5003ffa5c9 826 Gene3D G3DSA:3.30.2080.10 338 816 2.6E-216 T 13-10-2018 VEA_000710 22caf873ee25caea03426a5003ffa5c9 826 SUPERFAMILY SSF48208 312 795 6.8E-18 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VEA_000710 22caf873ee25caea03426a5003ffa5c9 826 Gene3D G3DSA:1.20.1610.10 513 691 2.6E-216 T 13-10-2018 VEA_004302 f04fb5bd26b4686fb4db3b46d541efa3 321 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 35 234 8.4E-24 T 13-10-2018 IPR000477 Reverse transcriptase domain VEA_004302 f04fb5bd26b4686fb4db3b46d541efa3 321 SUPERFAMILY SSF56672 21 226 1.78E-10 T 13-10-2018 VEA_004302 f04fb5bd26b4686fb4db3b46d541efa3 321 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 177 188 2.6E-28 T 13-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 VEA_004302 f04fb5bd26b4686fb4db3b46d541efa3 321 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 75 89 2.6E-28 T 13-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 VEA_004302 f04fb5bd26b4686fb4db3b46d541efa3 321 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 30 43 2.6E-28 T 13-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 VEA_004302 f04fb5bd26b4686fb4db3b46d541efa3 321 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 232 238 2.6E-28 T 13-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 VEA_004302 f04fb5bd26b4686fb4db3b46d541efa3 321 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 44 56 2.6E-28 T 13-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 VEA_004302 f04fb5bd26b4686fb4db3b46d541efa3 321 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 144 157 2.6E-28 T 13-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 VEA_004302 f04fb5bd26b4686fb4db3b46d541efa3 321 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 91 109 2.6E-28 T 13-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 VEA_004245 ceb789a084b0191e15ab55928c5af542 760 Gene3D G3DSA:1.25.40.10 241 445 8.2E-19 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_004245 ceb789a084b0191e15ab55928c5af542 760 SMART SM00028 254 287 27.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_004245 ceb789a084b0191e15ab55928c5af542 760 SMART SM00028 294 327 0.054 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_004245 ceb789a084b0191e15ab55928c5af542 760 SMART SM00028 88 121 3.8 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_004245 ceb789a084b0191e15ab55928c5af542 760 SMART SM00028 174 207 260.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_004245 ceb789a084b0191e15ab55928c5af542 760 SMART SM00028 334 367 31.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_004245 ceb789a084b0191e15ab55928c5af542 760 Gene3D G3DSA:1.25.40.10 70 235 1.1E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_004245 ceb789a084b0191e15ab55928c5af542 760 SUPERFAMILY SSF48452 336 445 1.21E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_004245 ceb789a084b0191e15ab55928c5af542 760 SUPERFAMILY SSF48452 176 364 1.38E-17 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_002152 bba6b79fa9a103ea0218ef5470c866d4 466 Gene3D G3DSA:3.30.390.30 345 464 1.6E-32 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VEA_002152 bba6b79fa9a103ea0218ef5470c866d4 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 9.2E-59 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VEA_002152 bba6b79fa9a103ea0218ef5470c866d4 466 SUPERFAMILY SSF51905 5 319 5.79E-56 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_002152 bba6b79fa9a103ea0218ef5470c866d4 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 457 8.1E-30 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VEA_002152 bba6b79fa9a103ea0218ef5470c866d4 466 PIRSF PIRSF000350 2 463 5.1E-70 T 13-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 VEA_002152 bba6b79fa9a103ea0218ef5470c866d4 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 3.2E-52 T 13-10-2018 VEA_002152 bba6b79fa9a103ea0218ef5470c866d4 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 3.2E-52 T 13-10-2018 VEA_002152 bba6b79fa9a103ea0218ef5470c866d4 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 3.2E-52 T 13-10-2018 VEA_002152 bba6b79fa9a103ea0218ef5470c866d4 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 3.2E-52 T 13-10-2018 VEA_002152 bba6b79fa9a103ea0218ef5470c866d4 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 3.2E-52 T 13-10-2018 VEA_002152 bba6b79fa9a103ea0218ef5470c866d4 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 3.2E-52 T 13-10-2018 VEA_002152 bba6b79fa9a103ea0218ef5470c866d4 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 3.2E-52 T 13-10-2018 VEA_002152 bba6b79fa9a103ea0218ef5470c866d4 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 3.2E-52 T 13-10-2018 VEA_002152 bba6b79fa9a103ea0218ef5470c866d4 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 3.2E-52 T 13-10-2018 VEA_002152 bba6b79fa9a103ea0218ef5470c866d4 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 3.2E-28 T 13-10-2018 VEA_002152 bba6b79fa9a103ea0218ef5470c866d4 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 3.2E-28 T 13-10-2018 VEA_002152 bba6b79fa9a103ea0218ef5470c866d4 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 3.2E-28 T 13-10-2018 VEA_002152 bba6b79fa9a103ea0218ef5470c866d4 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 3.2E-28 T 13-10-2018 VEA_002152 bba6b79fa9a103ea0218ef5470c866d4 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 3.2E-28 T 13-10-2018 VEA_002152 bba6b79fa9a103ea0218ef5470c866d4 466 Gene3D G3DSA:3.50.50.60 7 333 7.8E-93 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_002152 bba6b79fa9a103ea0218ef5470c866d4 466 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 2 466 65.133 T 13-10-2018 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 VEA_002152 bba6b79fa9a103ea0218ef5470c866d4 466 Gene3D G3DSA:3.50.50.60 157 275 7.8E-93 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_002152 bba6b79fa9a103ea0218ef5470c866d4 466 SUPERFAMILY SSF55424 344 463 1.53E-30 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VEA_003294 92307d320d33700ff2cca55b704e8326 148 SUPERFAMILY SSF55729 2 143 8.02E-18 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_003294 92307d320d33700ff2cca55b704e8326 148 Pfam PF13673 Acetyltransferase (GNAT) domain 27 145 1.7E-24 T 13-10-2018 IPR000182 GNAT domain VEA_003294 92307d320d33700ff2cca55b704e8326 148 Gene3D G3DSA:3.40.630.30 1 148 8.2E-17 T 13-10-2018 VEA_000954 60715dff4453f5c069f8154b33cfa60a 160 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 77 156 1.9E-33 T 13-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 VEA_000954 60715dff4453f5c069f8154b33cfa60a 160 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 4 72 1.8E-6 T 13-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 VEA_000954 60715dff4453f5c069f8154b33cfa60a 160 SUPERFAMILY SSF46767 75 156 2.49E-33 T 13-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 VEA_000954 60715dff4453f5c069f8154b33cfa60a 160 Gene3D G3DSA:1.10.10.10 75 158 7.2E-38 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000954 60715dff4453f5c069f8154b33cfa60a 160 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 76 155 1.2E-38 T 13-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 VEA_000954 60715dff4453f5c069f8154b33cfa60a 160 SUPERFAMILY SSF53155 4 80 2.75E-18 T 13-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 VEA_000954 60715dff4453f5c069f8154b33cfa60a 160 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 7 156 43.269 T 13-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 VEA_000954 60715dff4453f5c069f8154b33cfa60a 160 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 126 132 - T 13-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 VEA_000954 60715dff4453f5c069f8154b33cfa60a 160 Gene3D G3DSA:3.30.160.70 3 71 1.6E-17 T 13-10-2018 VEA_004100 2da76f2506f9e6159dc4b51475289b3f 577 Gene3D G3DSA:3.40.50.620 108 454 6.1E-109 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_004100 2da76f2506f9e6159dc4b51475289b3f 577 SUPERFAMILY SSF55190 2 101 2.88E-22 T 13-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 VEA_004100 2da76f2506f9e6159dc4b51475289b3f 577 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEA_004100 2da76f2506f9e6159dc4b51475289b3f 577 Pfam PF05746 DALR anticodon binding domain 461 577 1.6E-36 T 13-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 VEA_004100 2da76f2506f9e6159dc4b51475289b3f 577 Pfam PF00750 tRNA synthetases class I (R) 98 447 9.6E-164 T 13-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 VEA_004100 2da76f2506f9e6159dc4b51475289b3f 577 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 577 1.0E-200 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VEA_004100 2da76f2506f9e6159dc4b51475289b3f 577 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 577 28.213 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VEA_004100 2da76f2506f9e6159dc4b51475289b3f 577 SUPERFAMILY SSF52374 111 454 1.13E-93 T 13-10-2018 VEA_004100 2da76f2506f9e6159dc4b51475289b3f 577 SMART SM01016 5 87 2.0E-28 T 13-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VEA_004100 2da76f2506f9e6159dc4b51475289b3f 577 SUPERFAMILY SSF47323 455 577 6.54E-36 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEA_004100 2da76f2506f9e6159dc4b51475289b3f 577 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 2.8E-20 T 13-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VEA_004100 2da76f2506f9e6159dc4b51475289b3f 577 Gene3D G3DSA:1.10.730.10 455 577 4.8E-36 T 13-10-2018 VEA_004100 2da76f2506f9e6159dc4b51475289b3f 577 Gene3D G3DSA:3.30.1360.70 1 106 7.7E-34 T 13-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 VEA_004100 2da76f2506f9e6159dc4b51475289b3f 577 SMART SM00836 461 577 9.0E-42 T 13-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 VEA_004100 2da76f2506f9e6159dc4b51475289b3f 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 3.6E-25 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VEA_004100 2da76f2506f9e6159dc4b51475289b3f 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 3.6E-25 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VEA_004100 2da76f2506f9e6159dc4b51475289b3f 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 3.6E-25 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VEA_004100 2da76f2506f9e6159dc4b51475289b3f 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 304 325 3.6E-25 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VEA_001382 fbc424009eb4a81d02f9b214b4716e0f 523 Pfam PF00005 ABC transporter 29 170 3.7E-16 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_001382 fbc424009eb4a81d02f9b214b4716e0f 523 SMART SM00382 360 521 7.0E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_001382 fbc424009eb4a81d02f9b214b4716e0f 523 SMART SM00382 28 213 6.8E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_001382 fbc424009eb4a81d02f9b214b4716e0f 523 Gene3D G3DSA:3.40.50.300 2 267 1.2E-40 T 13-10-2018 VEA_001382 fbc424009eb4a81d02f9b214b4716e0f 523 SUPERFAMILY SSF52540 354 512 4.6E-29 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001382 fbc424009eb4a81d02f9b214b4716e0f 523 Pfam PF00005 ABC transporter 354 480 5.9E-14 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_001382 fbc424009eb4a81d02f9b214b4716e0f 523 Gene3D G3DSA:3.40.50.300 290 521 1.0E-32 T 13-10-2018 VEA_001382 fbc424009eb4a81d02f9b214b4716e0f 523 SUPERFAMILY SSF52540 3 236 2.09E-33 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_004005 b1a6f941950e0ccdd5fb80c82c1f9c93 386 Gene3D G3DSA:1.10.10.680 169 250 2.1E-77 T 13-10-2018 VEA_004005 b1a6f941950e0ccdd5fb80c82c1f9c93 386 SUPERFAMILY SSF52980 1 382 1.18E-117 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VEA_004005 b1a6f941950e0ccdd5fb80c82c1f9c93 386 Pfam PF09002 Domain of unknown function (DUF1887) 1 378 2.8E-162 T 13-10-2018 IPR015093 Protein of unknown function DUF1887 VEA_004005 b1a6f941950e0ccdd5fb80c82c1f9c93 386 Gene3D G3DSA:3.40.50.10770 1 140 8.8E-60 T 13-10-2018 VEA_004005 b1a6f941950e0ccdd5fb80c82c1f9c93 386 Gene3D G3DSA:3.40.1350.10 251 376 2.1E-77 T 13-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 VEA_003399 37e9ee09bf9cf1137d4bf4e7b64f1c7e 231 PIRSF PIRSF006293 1 224 2.0E-84 T 13-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 VEA_003399 37e9ee09bf9cf1137d4bf4e7b64f1c7e 231 Gene3D G3DSA:3.40.50.620 1 230 6.5E-81 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_003399 37e9ee09bf9cf1137d4bf4e7b64f1c7e 231 Pfam PF06508 Queuosine biosynthesis protein QueC 3 212 2.6E-85 T 13-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 VEA_003399 37e9ee09bf9cf1137d4bf4e7b64f1c7e 231 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 205 4.4E-84 T 13-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 VEA_003399 37e9ee09bf9cf1137d4bf4e7b64f1c7e 231 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 218 51.503 T 13-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 VEA_003399 37e9ee09bf9cf1137d4bf4e7b64f1c7e 231 SUPERFAMILY SSF52402 1 212 6.17E-67 T 13-10-2018 VEA_002875 d2bac9acdde8684c0e30171ee79ef398 308 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 37.307 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VEA_002875 d2bac9acdde8684c0e30171ee79ef398 308 SUPERFAMILY SSF52096 25 282 8.62E-84 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEA_002875 d2bac9acdde8684c0e30171ee79ef398 308 Gene3D G3DSA:3.90.226.10 25 285 2.9E-81 T 13-10-2018 VEA_002875 d2bac9acdde8684c0e30171ee79ef398 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 1.1E-38 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VEA_002875 d2bac9acdde8684c0e30171ee79ef398 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 1.1E-38 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VEA_002875 d2bac9acdde8684c0e30171ee79ef398 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 1.1E-38 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VEA_002875 d2bac9acdde8684c0e30171ee79ef398 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 1.1E-38 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VEA_002875 d2bac9acdde8684c0e30171ee79ef398 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 1.1E-38 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VEA_002875 d2bac9acdde8684c0e30171ee79ef398 308 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 284 2.9E-139 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VEA_002875 d2bac9acdde8684c0e30171ee79ef398 308 Pfam PF01039 Carboxyl transferase domain 99 239 5.1E-14 T 13-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 VEA_003055 7bb8654f7bfdc9c50de3dfe190ed9065 339 PIRSF PIRSF029594 1 330 1.7E-94 T 13-10-2018 IPR016926 Uncharacterised conserved protein UCP029594 VEA_003055 7bb8654f7bfdc9c50de3dfe190ed9065 339 Pfam PF13515 Fusaric acid resistance protein-like 182 313 1.1E-6 T 13-10-2018 VEA_003055 7bb8654f7bfdc9c50de3dfe190ed9065 339 Pfam PF11168 Protein of unknown function (DUF2955) 2 141 3.6E-48 T 13-10-2018 IPR022604 Protein of unknown function DUF2955 VEA_001576 0ebeec62ed4e5b27c5bc9293e9a235d9 190 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 61 89 - T 13-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 VEA_001576 0ebeec62ed4e5b27c5bc9293e9a235d9 190 Gene3D G3DSA:2.60.130.10 4 190 4.2E-42 T 13-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 VEA_001576 0ebeec62ed4e5b27c5bc9293e9a235d9 190 Pfam PF00775 Dioxygenase 32 155 1.6E-21 T 13-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 VEA_001576 0ebeec62ed4e5b27c5bc9293e9a235d9 190 SUPERFAMILY SSF49482 9 189 2.22E-46 T 13-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 VEA_001975 a6fc534ab7c3091f7ec5892295820c12 571 SUPERFAMILY SSF52540 304 553 7.56E-73 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001975 a6fc534ab7c3091f7ec5892295820c12 571 Gene3D G3DSA:3.40.50.300 301 571 1.0E-85 T 13-10-2018 VEA_001975 a6fc534ab7c3091f7ec5892295820c12 571 Gene3D G3DSA:3.40.50.300 1 289 1.3E-86 T 13-10-2018 VEA_001975 a6fc534ab7c3091f7ec5892295820c12 571 SMART SM00382 338 534 8.0E-18 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_001975 a6fc534ab7c3091f7ec5892295820c12 571 SMART SM00382 32 231 2.3E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_001975 a6fc534ab7c3091f7ec5892295820c12 571 Pfam PF00005 ABC transporter 24 181 8.3E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_001975 a6fc534ab7c3091f7ec5892295820c12 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 271 4.7E-6 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VEA_001975 a6fc534ab7c3091f7ec5892295820c12 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 534 567 7.9E-4 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VEA_001975 a6fc534ab7c3091f7ec5892295820c12 571 ProSitePatterns PS00211 ABC transporters family signature. 455 469 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_001975 a6fc534ab7c3091f7ec5892295820c12 571 Pfam PF00005 ABC transporter 330 483 4.7E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_001975 a6fc534ab7c3091f7ec5892295820c12 571 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_001975 a6fc534ab7c3091f7ec5892295820c12 571 SUPERFAMILY SSF52540 3 253 1.07E-65 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002744 d14e177e092c6fec56d60e242d24eb40 874 Gene3D G3DSA:3.30.70.260 796 873 1.4E-5 T 13-10-2018 VEA_002744 d14e177e092c6fec56d60e242d24eb40 874 SUPERFAMILY SSF55021 689 761 2.18E-8 T 13-10-2018 VEA_002744 d14e177e092c6fec56d60e242d24eb40 874 SUPERFAMILY SSF55021 797 860 1.2E-10 T 13-10-2018 VEA_002744 d14e177e092c6fec56d60e242d24eb40 874 Pfam PF01909 Nucleotidyltransferase domain 57 111 9.9E-8 T 13-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 VEA_002744 d14e177e092c6fec56d60e242d24eb40 874 SUPERFAMILY SSF109604 418 596 7.85E-14 T 13-10-2018 VEA_002744 d14e177e092c6fec56d60e242d24eb40 874 Pfam PF08335 GlnD PII-uridylyltransferase 176 314 9.7E-36 T 13-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 VEA_002744 d14e177e092c6fec56d60e242d24eb40 874 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 30 868 0.0 T 13-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 VEA_002744 d14e177e092c6fec56d60e242d24eb40 874 SUPERFAMILY SSF81301 43 171 1.2E-19 T 13-10-2018 VEA_002744 d14e177e092c6fec56d60e242d24eb40 874 Pfam PF01842 ACT domain 802 846 1.3E-7 T 13-10-2018 IPR002912 ACT domain VEA_002744 d14e177e092c6fec56d60e242d24eb40 874 Gene3D G3DSA:1.10.3210.10 435 588 1.1E-8 T 13-10-2018 VEA_002744 d14e177e092c6fec56d60e242d24eb40 874 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 874 337.227 T 13-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 VEA_002744 d14e177e092c6fec56d60e242d24eb40 874 SMART SM00471 447 594 5.1E-10 T 13-10-2018 IPR003607 HD/PDEase domain VEA_002744 d14e177e092c6fec56d60e242d24eb40 874 Pfam PF01966 HD domain 452 584 1.5E-13 T 13-10-2018 IPR006674 HD domain VEA_002744 d14e177e092c6fec56d60e242d24eb40 874 PIRSF PIRSF006288 7 874 0.0 T 13-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 VEA_002744 d14e177e092c6fec56d60e242d24eb40 874 SUPERFAMILY SSF81593 186 310 2.12E-9 T 13-10-2018 VEA_002299 1cd700eb4b11c98a3e5195ba68cc00a8 699 Gene3D G3DSA:3.30.230.10 489 693 3.1E-92 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VEA_002299 1cd700eb4b11c98a3e5195ba68cc00a8 699 SMART SM00889 485 603 5.5E-76 T 13-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VEA_002299 1cd700eb4b11c98a3e5195ba68cc00a8 699 SMART SM00838 605 693 4.8E-57 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like VEA_002299 1cd700eb4b11c98a3e5195ba68cc00a8 699 Pfam PF03764 Elongation factor G, domain IV 484 603 1.1E-48 T 13-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VEA_002299 1cd700eb4b11c98a3e5195ba68cc00a8 699 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site VEA_002299 1cd700eb4b11c98a3e5195ba68cc00a8 699 Pfam PF03144 Elongation factor Tu domain 2 329 396 3.0E-18 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VEA_002299 1cd700eb4b11c98a3e5195ba68cc00a8 699 SUPERFAMILY SSF54211 484 604 7.08E-47 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEA_002299 1cd700eb4b11c98a3e5195ba68cc00a8 699 PRINTS PR00315 GTP-binding elongation factor signature 58 66 7.1E-17 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_002299 1cd700eb4b11c98a3e5195ba68cc00a8 699 PRINTS PR00315 GTP-binding elongation factor signature 101 112 7.1E-17 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_002299 1cd700eb4b11c98a3e5195ba68cc00a8 699 PRINTS PR00315 GTP-binding elongation factor signature 85 95 7.1E-17 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_002299 1cd700eb4b11c98a3e5195ba68cc00a8 699 PRINTS PR00315 GTP-binding elongation factor signature 137 146 7.1E-17 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_002299 1cd700eb4b11c98a3e5195ba68cc00a8 699 PRINTS PR00315 GTP-binding elongation factor signature 12 25 7.1E-17 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_002299 1cd700eb4b11c98a3e5195ba68cc00a8 699 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 3.3E-66 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_002299 1cd700eb4b11c98a3e5195ba68cc00a8 699 Gene3D G3DSA:3.30.70.870 410 485 3.6E-32 T 13-10-2018 VEA_002299 1cd700eb4b11c98a3e5195ba68cc00a8 699 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 113.181 T 13-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VEA_002299 1cd700eb4b11c98a3e5195ba68cc00a8 699 SUPERFAMILY SSF52540 6 288 1.09E-105 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002299 1cd700eb4b11c98a3e5195ba68cc00a8 699 Gene3D G3DSA:3.30.70.240 609 680 3.1E-92 T 13-10-2018 VEA_002299 1cd700eb4b11c98a3e5195ba68cc00a8 699 SUPERFAMILY SSF50447 271 409 3.76E-36 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VEA_002299 1cd700eb4b11c98a3e5195ba68cc00a8 699 Pfam PF14492 Elongation Factor G, domain II 409 483 5.7E-33 T 13-10-2018 VEA_002299 1cd700eb4b11c98a3e5195ba68cc00a8 699 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 697 0.0 T 13-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VEA_002299 1cd700eb4b11c98a3e5195ba68cc00a8 699 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 1.2E-34 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VEA_002299 1cd700eb4b11c98a3e5195ba68cc00a8 699 SUPERFAMILY SSF54980 608 695 2.45E-30 T 13-10-2018 IPR035647 EF-G domain III/V-like VEA_002299 1cd700eb4b11c98a3e5195ba68cc00a8 699 Pfam PF00679 Elongation factor G C-terminus 605 692 1.0E-31 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like VEA_002299 1cd700eb4b11c98a3e5195ba68cc00a8 699 Gene3D G3DSA:3.40.50.300 1 298 5.0E-115 T 13-10-2018 VEA_002299 1cd700eb4b11c98a3e5195ba68cc00a8 699 SUPERFAMILY SSF54980 407 485 8.63E-25 T 13-10-2018 IPR035647 EF-G domain III/V-like VEA_002299 1cd700eb4b11c98a3e5195ba68cc00a8 699 Gene3D G3DSA:2.40.30.10 299 405 4.2E-48 T 13-10-2018 VEA_002917 080c24f4bd68b35051ef4f23b98d7dda 655 Gene3D G3DSA:1.10.290.10 293 422 8.8E-166 T 13-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 VEA_002917 080c24f4bd68b35051ef4f23b98d7dda 655 Gene3D G3DSA:1.10.460.10 163 605 8.8E-166 T 13-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VEA_002917 080c24f4bd68b35051ef4f23b98d7dda 655 SMART SM00437 284 563 3.4E-90 T 13-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 VEA_002917 080c24f4bd68b35051ef4f23b98d7dda 655 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 642 9.8E-238 T 13-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 VEA_002917 080c24f4bd68b35051ef4f23b98d7dda 655 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 526 540 3.9E-26 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VEA_002917 080c24f4bd68b35051ef4f23b98d7dda 655 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 99 112 3.9E-26 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VEA_002917 080c24f4bd68b35051ef4f23b98d7dda 655 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 327 336 3.9E-26 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VEA_002917 080c24f4bd68b35051ef4f23b98d7dda 655 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 408 424 3.9E-26 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VEA_002917 080c24f4bd68b35051ef4f23b98d7dda 655 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 194 212 3.9E-26 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VEA_002917 080c24f4bd68b35051ef4f23b98d7dda 655 Hamap MF_00953 DNA topoisomerase 3 [topB]. 2 647 64.595 T 13-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 VEA_002917 080c24f4bd68b35051ef4f23b98d7dda 655 Pfam PF01131 DNA topoisomerase 159 598 5.1E-116 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VEA_002917 080c24f4bd68b35051ef4f23b98d7dda 655 Pfam PF01751 Toprim domain 4 125 1.3E-16 T 13-10-2018 IPR006171 TOPRIM domain VEA_002917 080c24f4bd68b35051ef4f23b98d7dda 655 SUPERFAMILY SSF56712 3 611 3.27E-184 T 13-10-2018 IPR023405 DNA topoisomerase, type IA, core domain VEA_002917 080c24f4bd68b35051ef4f23b98d7dda 655 Gene3D G3DSA:2.70.20.10 218 493 8.8E-166 T 13-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VEA_002917 080c24f4bd68b35051ef4f23b98d7dda 655 Gene3D G3DSA:3.40.50.140 2 157 1.4E-60 T 13-10-2018 VEA_002917 080c24f4bd68b35051ef4f23b98d7dda 655 SMART SM00493 2 125 3.6E-28 T 13-10-2018 IPR006171 TOPRIM domain VEA_002917 080c24f4bd68b35051ef4f23b98d7dda 655 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 321 336 - T 13-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 VEA_002917 080c24f4bd68b35051ef4f23b98d7dda 655 SMART SM00436 129 224 3.4E-32 T 13-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 VEA_003319 37415043152464a58d6af5829af9e670 539 SUPERFAMILY SSF103190 40 169 1.53E-32 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VEA_003319 37415043152464a58d6af5829af9e670 539 Gene3D G3DSA:3.30.565.10 382 538 1.5E-22 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_003319 37415043152464a58d6af5829af9e670 539 SUPERFAMILY SSF55890 322 372 1.7E-9 T 13-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 VEA_003319 37415043152464a58d6af5829af9e670 539 SUPERFAMILY SSF55785 215 306 9.42E-12 T 13-10-2018 IPR035965 PAS domain superfamily VEA_003319 37415043152464a58d6af5829af9e670 539 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 420 536 1.1E-14 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_003319 37415043152464a58d6af5829af9e670 539 SMART SM00091 213 279 1.5E-5 T 13-10-2018 IPR000014 PAS domain VEA_003319 37415043152464a58d6af5829af9e670 539 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 320 372 1.9E-9 T 13-10-2018 IPR039506 SpoOB, alpha-helical domain VEA_003319 37415043152464a58d6af5829af9e670 539 SMART SM00387 418 537 9.9E-17 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_003319 37415043152464a58d6af5829af9e670 539 SUPERFAMILY SSF55874 388 534 1.57E-22 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_003319 37415043152464a58d6af5829af9e670 539 Gene3D G3DSA:3.30.450.20 34 164 1.1E-37 T 13-10-2018 VEA_003319 37415043152464a58d6af5829af9e670 539 Gene3D G3DSA:3.30.450.20 199 310 6.8E-23 T 13-10-2018 VEA_003319 37415043152464a58d6af5829af9e670 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 515 2.2E-6 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_003319 37415043152464a58d6af5829af9e670 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 534 2.2E-6 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_003319 37415043152464a58d6af5829af9e670 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 480 2.2E-6 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_003319 37415043152464a58d6af5829af9e670 539 Pfam PF00989 PAS fold 214 278 2.3E-7 T 13-10-2018 IPR013767 PAS fold GO:0006355 VEA_003319 37415043152464a58d6af5829af9e670 539 Pfam PF17203 Single cache domain 3 38 168 1.0E-18 T 13-10-2018 IPR033463 Single cache domain 3 VEA_004515 887b64a75b6792761f6adb2b3b77db23 354 Pfam PF13365 Trypsin-like peptidase domain 82 215 1.2E-32 T 13-10-2018 VEA_004515 887b64a75b6792761f6adb2b3b77db23 354 SUPERFAMILY SSF50156 239 346 4.86E-20 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 VEA_004515 887b64a75b6792761f6adb2b3b77db23 354 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 350 2.9E-165 T 13-10-2018 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 VEA_004515 887b64a75b6792761f6adb2b3b77db23 354 Gene3D G3DSA:2.40.10.10 143 255 1.7E-35 T 13-10-2018 VEA_004515 887b64a75b6792761f6adb2b3b77db23 354 Gene3D G3DSA:2.40.10.10 34 142 1.7E-32 T 13-10-2018 VEA_004515 887b64a75b6792761f6adb2b3b77db23 354 SUPERFAMILY SSF50494 43 265 4.18E-62 T 13-10-2018 IPR009003 Peptidase S1, PA clan VEA_004515 887b64a75b6792761f6adb2b3b77db23 354 Pfam PF13180 PDZ domain 257 346 7.4E-15 T 13-10-2018 IPR001478 PDZ domain GO:0005515 VEA_004515 887b64a75b6792761f6adb2b3b77db23 354 Gene3D G3DSA:2.30.42.10 256 354 2.1E-23 T 13-10-2018 VEA_004515 887b64a75b6792761f6adb2b3b77db23 354 PRINTS PR00834 HtrA/DegQ protease family signature 186 203 9.0E-47 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VEA_004515 887b64a75b6792761f6adb2b3b77db23 354 PRINTS PR00834 HtrA/DegQ protease family signature 296 308 9.0E-47 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VEA_004515 887b64a75b6792761f6adb2b3b77db23 354 PRINTS PR00834 HtrA/DegQ protease family signature 91 103 9.0E-47 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VEA_004515 887b64a75b6792761f6adb2b3b77db23 354 PRINTS PR00834 HtrA/DegQ protease family signature 112 132 9.0E-47 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VEA_004515 887b64a75b6792761f6adb2b3b77db23 354 PRINTS PR00834 HtrA/DegQ protease family signature 152 176 9.0E-47 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VEA_004515 887b64a75b6792761f6adb2b3b77db23 354 PRINTS PR00834 HtrA/DegQ protease family signature 208 225 9.0E-47 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VEA_004515 887b64a75b6792761f6adb2b3b77db23 354 SMART SM00228 256 338 2.9E-6 T 13-10-2018 IPR001478 PDZ domain GO:0005515 VEA_001543 37502ae696bce4b26aaa66049563a78c 335 SUPERFAMILY SSF56645 1 195 8.77E-71 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 VEA_001543 37502ae696bce4b26aaa66049563a78c 335 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 75 170 2.4E-26 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 VEA_001543 37502ae696bce4b26aaa66049563a78c 335 Gene3D G3DSA:1.10.540.10 1 73 3.6E-26 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 VEA_001543 37502ae696bce4b26aaa66049563a78c 335 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 182 330 2.6E-44 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VEA_001543 37502ae696bce4b26aaa66049563a78c 335 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 77 89 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 VEA_001543 37502ae696bce4b26aaa66049563a78c 335 SUPERFAMILY SSF47203 180 332 9.99E-49 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 VEA_001543 37502ae696bce4b26aaa66049563a78c 335 Gene3D G3DSA:2.40.110.10 74 186 3.0E-45 T 13-10-2018 VEA_001543 37502ae696bce4b26aaa66049563a78c 335 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 1 70 2.3E-21 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 VEA_001543 37502ae696bce4b26aaa66049563a78c 335 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 289 308 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 VEA_001543 37502ae696bce4b26aaa66049563a78c 335 Gene3D G3DSA:1.20.140.10 187 331 5.6E-49 T 13-10-2018 VEA_004209 0e080b36246df5ebebb34f0e62a2563a 363 SUPERFAMILY SSF81271 279 360 4.36E-37 T 13-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VEA_004209 0e080b36246df5ebebb34f0e62a2563a 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 8.3E-170 T 13-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 VEA_004209 0e080b36246df5ebebb34f0e62a2563a 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 8.0E-40 T 13-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 VEA_004209 0e080b36246df5ebebb34f0e62a2563a 363 PIRSF PIRSF006641 1 363 4.2E-158 T 13-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 VEA_004209 0e080b36246df5ebebb34f0e62a2563a 363 Gene3D G3DSA:1.10.150.300 120 200 3.2E-151 T 13-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 VEA_004209 0e080b36246df5ebebb34f0e62a2563a 363 Pfam PF01926 50S ribosome-binding GTPase 5 122 1.1E-21 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 VEA_004209 0e080b36246df5ebebb34f0e62a2563a 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 4.4E-34 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 VEA_004209 0e080b36246df5ebebb34f0e62a2563a 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 4.4E-34 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 VEA_004209 0e080b36246df5ebebb34f0e62a2563a 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 4.4E-34 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 VEA_004209 0e080b36246df5ebebb34f0e62a2563a 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 4.4E-34 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 VEA_004209 0e080b36246df5ebebb34f0e62a2563a 363 Gene3D G3DSA:3.10.20.30 48 362 3.2E-151 T 13-10-2018 IPR012675 Beta-grasp domain superfamily VEA_004209 0e080b36246df5ebebb34f0e62a2563a 363 Gene3D G3DSA:3.40.50.300 4 278 3.2E-151 T 13-10-2018 VEA_004209 0e080b36246df5ebebb34f0e62a2563a 363 SUPERFAMILY SSF52540 3 301 6.99E-84 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_004209 0e080b36246df5ebebb34f0e62a2563a 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 45.377 T 13-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 VEA_000330 fb2069b7384836d209b3091eefaf7c64 316 Pfam PF01032 FecCD transport family 27 312 1.3E-53 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VEA_000330 fb2069b7384836d209b3091eefaf7c64 316 SUPERFAMILY SSF81345 6 312 8.76E-57 T 13-10-2018 IPR037294 ABC transporter, BtuC-like VEA_000330 fb2069b7384836d209b3091eefaf7c64 316 Gene3D G3DSA:1.10.3470.10 4 315 1.7E-56 T 13-10-2018 IPR037294 ABC transporter, BtuC-like VEA_002484 192c6c24878ed1cd7e8446a77e07e362 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 2.4E-10 T 13-10-2018 VEA_002484 192c6c24878ed1cd7e8446a77e07e362 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 2.4E-10 T 13-10-2018 VEA_002484 192c6c24878ed1cd7e8446a77e07e362 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 2.4E-10 T 13-10-2018 VEA_002484 192c6c24878ed1cd7e8446a77e07e362 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 2.4E-10 T 13-10-2018 VEA_002484 192c6c24878ed1cd7e8446a77e07e362 392 Gene3D G3DSA:3.50.50.60 5 336 4.0E-96 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_002484 192c6c24878ed1cd7e8446a77e07e362 392 SUPERFAMILY SSF51905 3 382 6.48E-48 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_002484 192c6c24878ed1cd7e8446a77e07e362 392 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 13-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 VEA_002484 192c6c24878ed1cd7e8446a77e07e362 392 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 388 1.4E-121 T 13-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 VEA_002484 192c6c24878ed1cd7e8446a77e07e362 392 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 5 388 3.6E-146 T 13-10-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 VEA_002484 192c6c24878ed1cd7e8446a77e07e362 392 Gene3D G3DSA:3.30.9.50 81 270 4.0E-96 T 13-10-2018 VEA_002484 192c6c24878ed1cd7e8446a77e07e362 392 Pfam PF01494 FAD binding domain 4 334 7.6E-20 T 13-10-2018 IPR002938 FAD-binding domain GO:0071949 VEA_000194 7ca9beb81f9cf8b15738e368d4f325b0 176 SMART SM00867 11 174 2.6E-62 T 13-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like VEA_000194 7ca9beb81f9cf8b15738e368d4f325b0 176 SUPERFAMILY SSF101874 9 175 5.1E-50 T 13-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily VEA_000194 7ca9beb81f9cf8b15738e368d4f325b0 176 Pfam PF04264 YceI-like domain 12 171 1.5E-36 T 13-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like VEA_000194 7ca9beb81f9cf8b15738e368d4f325b0 176 Gene3D G3DSA:2.40.128.110 10 176 1.8E-49 T 13-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily VEA_003602 16fb45d1d4a9ecd0f1cdef94cdbced4b 473 Pfam PF00696 Amino acid kinase family 4 293 1.0E-23 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VEA_003602 16fb45d1d4a9ecd0f1cdef94cdbced4b 473 SUPERFAMILY SSF53633 5 307 7.33E-55 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VEA_003602 16fb45d1d4a9ecd0f1cdef94cdbced4b 473 SUPERFAMILY SSF55021 398 463 5.57E-9 T 13-10-2018 VEA_003602 16fb45d1d4a9ecd0f1cdef94cdbced4b 473 Gene3D G3DSA:3.30.2130.10 311 465 2.0E-9 T 13-10-2018 VEA_003602 16fb45d1d4a9ecd0f1cdef94cdbced4b 473 Gene3D G3DSA:3.40.1160.10 3 307 8.3E-58 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VEA_002173 efe4761dbad47c185a6d5b3dd5d3fc4e 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 7.3E-29 T 13-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEA_002173 efe4761dbad47c185a6d5b3dd5d3fc4e 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 225 1.6E-7 T 13-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEA_002173 efe4761dbad47c185a6d5b3dd5d3fc4e 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 338 454 8.1E-17 T 13-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEA_002173 efe4761dbad47c185a6d5b3dd5d3fc4e 1342 Gene3D G3DSA:2.40.270.10 1035 1241 5.3E-88 T 13-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEA_002173 efe4761dbad47c185a6d5b3dd5d3fc4e 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 13-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEA_002173 efe4761dbad47c185a6d5b3dd5d3fc4e 1342 Gene3D G3DSA:3.90.1110.10 157 270 1.2E-27 T 13-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEA_002173 efe4761dbad47c185a6d5b3dd5d3fc4e 1342 Gene3D G3DSA:3.90.1100.10 19 156 3.4E-48 T 13-10-2018 VEA_002173 efe4761dbad47c185a6d5b3dd5d3fc4e 1342 Gene3D G3DSA:2.40.50.100 714 788 2.2E-32 T 13-10-2018 VEA_002173 efe4761dbad47c185a6d5b3dd5d3fc4e 1342 Gene3D G3DSA:3.90.1100.10 646 713 1.8E-21 T 13-10-2018 VEA_002173 efe4761dbad47c185a6d5b3dd5d3fc4e 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1263 5.4E-157 T 13-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEA_002173 efe4761dbad47c185a6d5b3dd5d3fc4e 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1265 1339 3.0E-27 T 13-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEA_002173 efe4761dbad47c185a6d5b3dd5d3fc4e 1342 SUPERFAMILY SSF64484 11 1341 0.0 T 13-10-2018 VEA_002173 efe4761dbad47c185a6d5b3dd5d3fc4e 1342 Gene3D G3DSA:3.90.1100.10 416 626 9.9E-72 T 13-10-2018 VEA_002173 efe4761dbad47c185a6d5b3dd5d3fc4e 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1338 0.0 T 13-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEA_002173 efe4761dbad47c185a6d5b3dd5d3fc4e 1342 Gene3D G3DSA:3.90.1800.10 1251 1305 8.1E-11 T 13-10-2018 VEA_002173 efe4761dbad47c185a6d5b3dd5d3fc4e 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 2.0E-57 T 13-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEA_002173 efe4761dbad47c185a6d5b3dd5d3fc4e 1342 Gene3D G3DSA:2.40.270.10 790 833 1.1E-6 T 13-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEA_002173 efe4761dbad47c185a6d5b3dd5d3fc4e 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 1.2E-22 T 13-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEA_002173 efe4761dbad47c185a6d5b3dd5d3fc4e 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1341 12.287 T 13-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEA_002173 efe4761dbad47c185a6d5b3dd5d3fc4e 1342 Gene3D G3DSA:2.40.50.150 834 954 2.6E-44 T 13-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEA_001059 3d3f7d674851b55fe87e4db1a52c5c8f 235 SMART SM00448 4 114 7.3E-48 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_001059 3d3f7d674851b55fe87e4db1a52c5c8f 235 Gene3D G3DSA:1.10.10.10 122 232 1.8E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001059 3d3f7d674851b55fe87e4db1a52c5c8f 235 SMART SM00862 152 227 1.8E-17 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEA_001059 3d3f7d674851b55fe87e4db1a52c5c8f 235 Gene3D G3DSA:3.40.50.2300 1 121 2.3E-41 T 13-10-2018 VEA_001059 3d3f7d674851b55fe87e4db1a52c5c8f 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 227 2.7E-18 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEA_001059 3d3f7d674851b55fe87e4db1a52c5c8f 235 Pfam PF00072 Response regulator receiver domain 6 115 3.0E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_001059 3d3f7d674851b55fe87e4db1a52c5c8f 235 SUPERFAMILY SSF52172 3 131 1.21E-44 T 13-10-2018 IPR011006 CheY-like superfamily VEA_001059 3d3f7d674851b55fe87e4db1a52c5c8f 235 SUPERFAMILY SSF46894 132 229 1.05E-19 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEA_000380 71f6da53999b1e5f6e5aa61a0bfe0334 686 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 4.6E-45 T 13-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VEA_000380 71f6da53999b1e5f6e5aa61a0bfe0334 686 SUPERFAMILY SSF51230 590 666 1.31E-19 T 13-10-2018 IPR011053 Single hybrid motif VEA_000380 71f6da53999b1e5f6e5aa61a0bfe0334 686 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 623 640 - T 13-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VEA_000380 71f6da53999b1e5f6e5aa61a0bfe0334 686 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VEA_000380 71f6da53999b1e5f6e5aa61a0bfe0334 686 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 322 4.9E-80 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VEA_000380 71f6da53999b1e5f6e5aa61a0bfe0334 686 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VEA_000380 71f6da53999b1e5f6e5aa61a0bfe0334 686 SUPERFAMILY SSF51246 331 451 6.28E-36 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 VEA_000380 71f6da53999b1e5f6e5aa61a0bfe0334 686 Gene3D G3DSA:2.40.50.100 602 666 2.1E-20 T 13-10-2018 VEA_000380 71f6da53999b1e5f6e5aa61a0bfe0334 686 SUPERFAMILY SSF56059 83 343 3.54E-68 T 13-10-2018 VEA_000380 71f6da53999b1e5f6e5aa61a0bfe0334 686 Pfam PF02785 Biotin carboxylase C-terminal domain 336 447 6.9E-37 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VEA_000380 71f6da53999b1e5f6e5aa61a0bfe0334 686 SMART SM00878 336 448 1.9E-48 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VEA_000380 71f6da53999b1e5f6e5aa61a0bfe0334 686 Pfam PF00364 Biotin-requiring enzyme 607 665 1.9E-15 T 13-10-2018 IPR000089 Biotin/lipoyl attachment VEA_000380 71f6da53999b1e5f6e5aa61a0bfe0334 686 Gene3D G3DSA:3.30.470.130 1 455 4.6E-198 T 13-10-2018 VEA_000380 71f6da53999b1e5f6e5aa61a0bfe0334 686 SUPERFAMILY SSF52440 1 113 4.89E-49 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VEA_000668 9a808567840325faba3733a038fa478a 1050 SUPERFAMILY SSF82693 46 138 1.49E-19 T 13-10-2018 VEA_000668 9a808567840325faba3733a038fa478a 1050 SUPERFAMILY SSF82866 292 488 3.4E-37 T 13-10-2018 VEA_000668 9a808567840325faba3733a038fa478a 1050 Gene3D G3DSA:1.20.1640.10 16 501 2.5E-254 T 13-10-2018 VEA_000668 9a808567840325faba3733a038fa478a 1050 Gene3D G3DSA:3.30.70.1320 139 327 2.5E-254 T 13-10-2018 VEA_000668 9a808567840325faba3733a038fa478a 1050 Gene3D G3DSA:3.30.70.1430 46 803 2.5E-254 T 13-10-2018 VEA_000668 9a808567840325faba3733a038fa478a 1050 SUPERFAMILY SSF82693 150 325 6.63E-10 T 13-10-2018 VEA_000668 9a808567840325faba3733a038fa478a 1050 Gene3D G3DSA:3.30.70.1440 660 856 2.5E-254 T 13-10-2018 VEA_000668 9a808567840325faba3733a038fa478a 1050 Gene3D G3DSA:1.20.1640.10 502 1013 2.5E-254 T 13-10-2018 VEA_000668 9a808567840325faba3733a038fa478a 1050 Gene3D G3DSA:3.30.2090.10 708 795 2.5E-254 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_000668 9a808567840325faba3733a038fa478a 1050 Gene3D G3DSA:3.30.70.1430 559 659 2.5E-254 T 13-10-2018 VEA_000668 9a808567840325faba3733a038fa478a 1050 SUPERFAMILY SSF82714 719 793 7.59E-7 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_000668 9a808567840325faba3733a038fa478a 1050 SUPERFAMILY SSF82866 791 1019 2.88E-49 T 13-10-2018 VEA_000668 9a808567840325faba3733a038fa478a 1050 Gene3D G3DSA:3.30.2090.10 180 270 2.5E-254 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_000668 9a808567840325faba3733a038fa478a 1050 SUPERFAMILY SSF82714 185 266 8.37E-14 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_000668 9a808567840325faba3733a038fa478a 1050 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 4.9E-24 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_000668 9a808567840325faba3733a038fa478a 1050 PRINTS PR00702 Acriflavin resistance protein family signature 44 62 4.9E-24 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_000668 9a808567840325faba3733a038fa478a 1050 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 4.9E-24 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_000668 9a808567840325faba3733a038fa478a 1050 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 4.9E-24 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_000668 9a808567840325faba3733a038fa478a 1050 PRINTS PR00702 Acriflavin resistance protein family signature 16 40 4.9E-24 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_000668 9a808567840325faba3733a038fa478a 1050 Pfam PF00873 AcrB/AcrD/AcrF family 10 1016 2.1E-162 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_003075 758c9a965b4630ff41b295e46e3dae96 187 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 177 5.3E-63 T 13-10-2018 IPR006008 Intracellular septation protein A GO:0016021 VEA_003075 758c9a965b4630ff41b295e46e3dae96 187 Pfam PF04279 Intracellular septation protein A 1 174 8.9E-67 T 13-10-2018 IPR006008 Intracellular septation protein A GO:0016021 VEA_003075 758c9a965b4630ff41b295e46e3dae96 187 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 175 18.291 T 13-10-2018 IPR006008 Intracellular septation protein A GO:0016021 VEA_002798 b510e60fb0c588daf9099ee28d4a6ce7 117 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 113 1.9E-29 T 13-10-2018 IPR006504 Transcriptional regulator Spx/MgsR VEA_002798 b510e60fb0c588daf9099ee28d4a6ce7 117 Pfam PF03960 ArsC family 6 113 8.1E-20 T 13-10-2018 IPR006660 Arsenate reductase-like VEA_002798 b510e60fb0c588daf9099ee28d4a6ce7 117 Gene3D G3DSA:3.40.30.10 2 115 7.0E-41 T 13-10-2018 VEA_002798 b510e60fb0c588daf9099ee28d4a6ce7 117 SUPERFAMILY SSF52833 3 115 2.4E-33 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VEA_001696 7172b21e16cbcb41f39c6094940c498c 66 Gene3D G3DSA:3.30.1910.10 2 65 2.4E-19 T 13-10-2018 VEA_001696 7172b21e16cbcb41f39c6094940c498c 66 Pfam PF06526 Protein of unknown function (DUF1107) 2 64 1.8E-25 T 13-10-2018 IPR009491 Protein of unknown function DUF1107 VEA_001696 7172b21e16cbcb41f39c6094940c498c 66 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 65 2.0E-26 T 13-10-2018 IPR009491 Protein of unknown function DUF1107 VEA_002870 da9e698b88abdfaadf71e78d3274bc5e 403 Gene3D G3DSA:3.40.47.10 6 257 5.2E-68 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VEA_002870 da9e698b88abdfaadf71e78d3274bc5e 403 SUPERFAMILY SSF53901 1 251 1.12E-66 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VEA_002870 da9e698b88abdfaadf71e78d3274bc5e 403 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 4.3E-45 T 13-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal VEA_002870 da9e698b88abdfaadf71e78d3274bc5e 403 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 13-10-2018 IPR018201 Beta-ketoacyl synthase, active site VEA_002870 da9e698b88abdfaadf71e78d3274bc5e 403 Gene3D G3DSA:3.40.47.10 258 401 1.6E-49 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VEA_002870 da9e698b88abdfaadf71e78d3274bc5e 403 SUPERFAMILY SSF53901 213 401 4.15E-62 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VEA_002870 da9e698b88abdfaadf71e78d3274bc5e 403 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 358 2.2E-27 T 13-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal VEA_002870 da9e698b88abdfaadf71e78d3274bc5e 403 SMART SM00825 Beta-ketoacyl synthase 4 403 3.0E-14 T 13-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VEA_002129 f1a3ac4aeca205637e5bdb09b4a6ada4 337 Pfam PF01757 Acyltransferase family 7 327 2.5E-28 T 13-10-2018 IPR002656 Acyltransferase 3 GO:0016747 VEA_002444 2bd1dbfe055004d0c6a81c1c8b5f6802 372 Pfam PF11873 Domain of unknown function (DUF3393) 3 205 6.6E-78 T 13-10-2018 IPR024570 Murein transglycosylase-C, N-terminal VEA_002444 2bd1dbfe055004d0c6a81c1c8b5f6802 372 Pfam PF01464 Transglycosylase SLT domain 211 332 4.5E-28 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 VEA_002444 2bd1dbfe055004d0c6a81c1c8b5f6802 372 SUPERFAMILY SSF53955 206 368 1.41E-35 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily VEA_002444 2bd1dbfe055004d0c6a81c1c8b5f6802 372 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 228 256 - T 13-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VEA_002444 2bd1dbfe055004d0c6a81c1c8b5f6802 372 Gene3D G3DSA:1.10.530.10 190 370 2.7E-49 T 13-10-2018 VEA_003090 8167a4a63912a327c3216777b9e6ad7f 264 Gene3D G3DSA:1.10.150.650 77 148 1.4E-70 T 13-10-2018 VEA_003090 8167a4a63912a327c3216777b9e6ad7f 264 SUPERFAMILY SSF89550 1 254 1.08E-42 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 VEA_003090 8167a4a63912a327c3216777b9e6ad7f 264 Pfam PF02811 PHP domain 1 160 6.8E-6 T 13-10-2018 IPR004013 PHP domain GO:0003824 VEA_003090 8167a4a63912a327c3216777b9e6ad7f 264 Gene3D G3DSA:3.20.20.140 1 229 1.4E-70 T 13-10-2018 VEA_000783 47c95ee7ff164ae3a0c81c86489df4cf 224 Gene3D G3DSA:3.40.50.1000 5 218 3.6E-64 T 13-10-2018 IPR023214 HAD superfamily VEA_000783 47c95ee7ff164ae3a0c81c86489df4cf 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 194 2.1E-23 T 13-10-2018 VEA_000783 47c95ee7ff164ae3a0c81c86489df4cf 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 65 195 1.6E-9 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEA_000783 47c95ee7ff164ae3a0c81c86489df4cf 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 96 189 1.5E-15 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEA_000783 47c95ee7ff164ae3a0c81c86489df4cf 224 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 222 1.2E-87 T 13-10-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 VEA_000783 47c95ee7ff164ae3a0c81c86489df4cf 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 184 197 6.3E-8 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEA_000783 47c95ee7ff164ae3a0c81c86489df4cf 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 6.3E-8 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEA_000783 47c95ee7ff164ae3a0c81c86489df4cf 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 6.3E-8 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEA_000783 47c95ee7ff164ae3a0c81c86489df4cf 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 6.3E-8 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEA_000783 47c95ee7ff164ae3a0c81c86489df4cf 224 Gene3D G3DSA:1.10.150.240 16 95 3.6E-64 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VEA_000783 47c95ee7ff164ae3a0c81c86489df4cf 224 SUPERFAMILY SSF56784 2 222 2.9E-49 T 13-10-2018 IPR036412 HAD-like superfamily VEA_002277 cbd09b5aa358be5a4fa417ca239c4cb7 485 Pfam PF00171 Aldehyde dehydrogenase family 9 458 6.0E-122 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VEA_002277 cbd09b5aa358be5a4fa417ca239c4cb7 485 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 1 485 56.433 T 13-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 VEA_002277 cbd09b5aa358be5a4fa417ca239c4cb7 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 242 249 - T 13-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VEA_002277 cbd09b5aa358be5a4fa417ca239c4cb7 485 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 3 484 8.2E-229 T 13-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 VEA_002277 cbd09b5aa358be5a4fa417ca239c4cb7 485 Gene3D G3DSA:3.40.605.10 7 448 1.7E-141 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VEA_002277 cbd09b5aa358be5a4fa417ca239c4cb7 485 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VEA_002277 cbd09b5aa358be5a4fa417ca239c4cb7 485 Gene3D G3DSA:3.40.309.10 247 436 1.7E-141 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VEA_002277 cbd09b5aa358be5a4fa417ca239c4cb7 485 SUPERFAMILY SSF53720 2 449 5.11E-124 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VEA_001230 9649750e9e80f918b5483e7741f769f4 786 Pfam PF13654 AAA domain 25 539 5.3E-184 T 13-10-2018 VEA_001230 9649750e9e80f918b5483e7741f769f4 786 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 649 752 1.9E-9 T 13-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 VEA_001230 9649750e9e80f918b5483e7741f769f4 786 SUPERFAMILY SSF54211 564 756 5.69E-35 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEA_001230 9649750e9e80f918b5483e7741f769f4 786 Gene3D G3DSA:3.40.50.300 191 449 9.5E-56 T 13-10-2018 VEA_001230 9649750e9e80f918b5483e7741f769f4 786 Gene3D G3DSA:3.40.50.300 5 179 1.4E-27 T 13-10-2018 VEA_001230 9649750e9e80f918b5483e7741f769f4 786 Gene3D G3DSA:3.30.230.10 541 767 6.6E-91 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VEA_001230 9649750e9e80f918b5483e7741f769f4 786 SUPERFAMILY SSF52540 30 551 6.83E-11 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001230 9649750e9e80f918b5483e7741f769f4 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 676 695 8.8E-7 T 13-10-2018 VEA_001230 9649750e9e80f918b5483e7741f769f4 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 706 724 8.8E-7 T 13-10-2018 VEA_001230 9649750e9e80f918b5483e7741f769f4 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 646 665 8.8E-7 T 13-10-2018 VEA_001230 9649750e9e80f918b5483e7741f769f4 786 Gene3D G3DSA:1.10.8.60 450 537 4.0E-12 T 13-10-2018 VEA_004268 d78bc66bde679a35ea411a50f01f0762 379 Gene3D G3DSA:2.30.130.10 275 377 2.0E-31 T 13-10-2018 IPR036974 PUA domain superfamily GO:0003723 VEA_004268 d78bc66bde679a35ea411a50f01f0762 379 ProSitePatterns PS00902 Glutamate 5-kinase signature. 216 233 - T 13-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VEA_004268 d78bc66bde679a35ea411a50f01f0762 379 Pfam PF01472 PUA domain 286 360 4.2E-23 T 13-10-2018 IPR002478 PUA domain GO:0003723 VEA_004268 d78bc66bde679a35ea411a50f01f0762 379 TIGRFAM TIGR01027 proB: glutamate 5-kinase 14 375 8.0E-148 T 13-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VEA_004268 d78bc66bde679a35ea411a50f01f0762 379 SUPERFAMILY SSF53633 15 265 5.89E-65 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VEA_004268 d78bc66bde679a35ea411a50f01f0762 379 Gene3D G3DSA:3.40.1160.10 5 274 7.2E-87 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VEA_004268 d78bc66bde679a35ea411a50f01f0762 379 SUPERFAMILY SSF88697 286 376 6.63E-25 T 13-10-2018 IPR015947 PUA-like superfamily VEA_004268 d78bc66bde679a35ea411a50f01f0762 379 SMART SM00359 286 369 6.7E-19 T 13-10-2018 IPR002478 PUA domain GO:0003723 VEA_004268 d78bc66bde679a35ea411a50f01f0762 379 PRINTS PR00474 Glutamate 5-kinase family signature 85 113 1.3E-53 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 VEA_004268 d78bc66bde679a35ea411a50f01f0762 379 PRINTS PR00474 Glutamate 5-kinase family signature 218 238 1.3E-53 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 VEA_004268 d78bc66bde679a35ea411a50f01f0762 379 PRINTS PR00474 Glutamate 5-kinase family signature 125 146 1.3E-53 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 VEA_004268 d78bc66bde679a35ea411a50f01f0762 379 PRINTS PR00474 Glutamate 5-kinase family signature 157 184 1.3E-53 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 VEA_004268 d78bc66bde679a35ea411a50f01f0762 379 PRINTS PR00474 Glutamate 5-kinase family signature 51 65 1.3E-53 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 VEA_004268 d78bc66bde679a35ea411a50f01f0762 379 Hamap MF_00456 Glutamate 5-kinase [proB]. 14 268 35.888 T 13-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VEA_004268 d78bc66bde679a35ea411a50f01f0762 379 PIRSF PIRSF000729 9 378 9.4E-137 T 13-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 VEA_004268 d78bc66bde679a35ea411a50f01f0762 379 Pfam PF00696 Amino acid kinase family 15 243 1.1E-41 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VEA_001180 02a1e1ddd5b675df09f4b5941df3aed5 252 Pfam PF00813 FliP family 55 247 3.1E-75 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VEA_001180 02a1e1ddd5b675df09f4b5941df3aed5 252 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 55 251 9.3E-76 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VEA_001180 02a1e1ddd5b675df09f4b5941df3aed5 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 111 123 2.5E-13 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VEA_001180 02a1e1ddd5b675df09f4b5941df3aed5 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 151 163 2.5E-13 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VEA_001180 02a1e1ddd5b675df09f4b5941df3aed5 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 123 137 2.5E-13 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VEA_001180 02a1e1ddd5b675df09f4b5941df3aed5 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 51 60 2.5E-13 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VEA_001180 02a1e1ddd5b675df09f4b5941df3aed5 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 173 185 2.5E-13 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VEA_001180 02a1e1ddd5b675df09f4b5941df3aed5 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 241 251 2.5E-13 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VEA_001180 02a1e1ddd5b675df09f4b5941df3aed5 252 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 228 240 - T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VEA_001180 02a1e1ddd5b675df09f4b5941df3aed5 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 180 200 3.5E-65 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VEA_001180 02a1e1ddd5b675df09f4b5941df3aed5 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 72 92 3.5E-65 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VEA_001180 02a1e1ddd5b675df09f4b5941df3aed5 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 225 250 3.5E-65 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VEA_001180 02a1e1ddd5b675df09f4b5941df3aed5 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 201 222 3.5E-65 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VEA_001180 02a1e1ddd5b675df09f4b5941df3aed5 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 53 72 3.5E-65 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VEA_001180 02a1e1ddd5b675df09f4b5941df3aed5 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 92 111 3.5E-65 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VEA_001180 02a1e1ddd5b675df09f4b5941df3aed5 252 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 180 195 - T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VEA_001178 6f2899218c98f0099df426b9c6e7c758 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 1.4E-23 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VEA_001178 6f2899218c98f0099df426b9c6e7c758 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 1.4E-23 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VEA_001178 6f2899218c98f0099df426b9c6e7c758 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 179 201 1.4E-23 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VEA_001178 6f2899218c98f0099df426b9c6e7c758 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 201 220 1.4E-23 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VEA_001178 6f2899218c98f0099df426b9c6e7c758 258 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 15 254 1.2E-58 T 13-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 VEA_001178 6f2899218c98f0099df426b9c6e7c758 258 Pfam PF01311 Bacterial export proteins, family 1 14 243 1.2E-60 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VEA_000432 40b50275c5bfb3fd15445dc7ed08fd56 497 Pfam PF00498 FHA domain 31 97 6.8E-17 T 13-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 VEA_000432 40b50275c5bfb3fd15445dc7ed08fd56 497 SUPERFAMILY SSF49879 21 106 2.87E-24 T 13-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 VEA_000432 40b50275c5bfb3fd15445dc7ed08fd56 497 SMART SM00240 29 80 5.8E-7 T 13-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 VEA_000432 40b50275c5bfb3fd15445dc7ed08fd56 497 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 22 470 1.3E-35 T 13-10-2018 IPR017735 Type VI secretion system, FHA domain-containing protein VEA_000432 40b50275c5bfb3fd15445dc7ed08fd56 497 Gene3D G3DSA:2.60.200.20 3 113 6.5E-22 T 13-10-2018 VEA_002782 4faf6b4b63edd977cc014fafeaafc233 210 Pfam PF14681 Uracil phosphoribosyltransferase 9 209 8.0E-65 T 13-10-2018 VEA_002782 4faf6b4b63edd977cc014fafeaafc233 210 Gene3D G3DSA:3.40.50.2020 3 210 9.2E-74 T 13-10-2018 VEA_002782 4faf6b4b63edd977cc014fafeaafc233 210 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 4 210 5.4E-92 T 13-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 VEA_002782 4faf6b4b63edd977cc014fafeaafc233 210 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 4 210 44.573 T 13-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 VEA_002782 4faf6b4b63edd977cc014fafeaafc233 210 SUPERFAMILY SSF53271 5 208 3.15E-67 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like VEA_002320 c1831aec999467b533db41867b35faab 303 SUPERFAMILY SSF53850 89 297 7.82E-40 T 13-10-2018 VEA_002320 c1831aec999467b533db41867b35faab 303 Gene3D G3DSA:3.40.190.10 91 281 3.7E-65 T 13-10-2018 VEA_002320 c1831aec999467b533db41867b35faab 303 Gene3D G3DSA:3.40.190.10 164 267 3.7E-65 T 13-10-2018 VEA_002320 c1831aec999467b533db41867b35faab 303 Gene3D G3DSA:1.10.10.10 1 84 1.3E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_002320 c1831aec999467b533db41867b35faab 303 SUPERFAMILY SSF46785 1 86 3.41E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_002320 c1831aec999467b533db41867b35faab 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 9.4E-20 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_002320 c1831aec999467b533db41867b35faab 303 Pfam PF03466 LysR substrate binding domain 89 293 1.3E-43 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_002320 c1831aec999467b533db41867b35faab 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.1E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_002320 c1831aec999467b533db41867b35faab 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.1E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_002320 c1831aec999467b533db41867b35faab 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.1E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000859 a2d3a2081f855cf12144fcb37fa85fb2 174 Pfam PF11286 Protein of unknown function (DUF3087) 1 171 4.6E-65 T 13-10-2018 IPR021438 Protein of unknown function DUF3087 VEA_003614 1df72e2edcf91abf3a864a5edb73da09 227 Gene3D G3DSA:1.20.910.10 3 225 3.1E-57 T 13-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 VEA_003614 1df72e2edcf91abf3a864a5edb73da09 227 SMART SM01236 74 175 6.5E-8 T 13-10-2018 VEA_003614 1df72e2edcf91abf3a864a5edb73da09 227 Pfam PF14518 Iron-containing redox enzyme 40 211 1.9E-26 T 13-10-2018 VEA_003614 1df72e2edcf91abf3a864a5edb73da09 227 SUPERFAMILY SSF48613 3 219 5.15E-59 T 13-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 VEA_003492 9528e26fc47bf6b026542e28265a7676 350 Gene3D G3DSA:1.20.950.20 118 336 4.3E-65 T 13-10-2018 VEA_003492 9528e26fc47bf6b026542e28265a7676 350 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 122 326 4.6E-83 T 13-10-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 VEA_003492 9528e26fc47bf6b026542e28265a7676 350 SUPERFAMILY SSF81342 119 333 4.08E-46 T 13-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 VEA_003492 9528e26fc47bf6b026542e28265a7676 350 Pfam PF01292 Prokaryotic cytochrome b561 125 306 5.1E-25 T 13-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 VEA_004305 4433d021a739e245c78e10b249491b53 413 Pfam PF05014 Nucleoside 2-deoxyribosyltransferase 287 379 2.6E-18 T 13-10-2018 IPR007710 Nucleoside 2-deoxyribosyltransferase Reactome: R-HSA-74259 VEA_004305 4433d021a739e245c78e10b249491b53 413 Gene3D G3DSA:3.40.50.450 280 403 2.1E-28 T 13-10-2018 VEA_004305 4433d021a739e245c78e10b249491b53 413 SUPERFAMILY SSF53613 20 251 1.15E-15 T 13-10-2018 IPR029056 Ribokinase-like VEA_004305 4433d021a739e245c78e10b249491b53 413 Gene3D G3DSA:3.40.1190.20 118 264 4.9E-15 T 13-10-2018 IPR029056 Ribokinase-like VEA_004305 4433d021a739e245c78e10b249491b53 413 SUPERFAMILY SSF52309 283 396 8.47E-26 T 13-10-2018 VEA_004305 4433d021a739e245c78e10b249491b53 413 Pfam PF00294 pfkB family carbohydrate kinase 151 232 3.2E-5 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB VEA_002293 0bc8a7cb08c0d6bfde863d0b9a46a749 226 Pfam PF08348 YheO-like PAS domain 17 125 8.2E-36 T 13-10-2018 IPR013559 YheO-like VEA_002293 0bc8a7cb08c0d6bfde863d0b9a46a749 226 Pfam PF13309 HTH domain 160 217 1.6E-18 T 13-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain VEA_002293 0bc8a7cb08c0d6bfde863d0b9a46a749 226 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 16 129 2.0E-61 T 13-10-2018 IPR013559 YheO-like VEA_002498 cd6f619fb489f34300907dea4c0f3b77 320 Pfam PF07650 KH domain 227 304 4.3E-21 T 13-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_002498 cd6f619fb489f34300907dea4c0f3b77 320 TIGRFAM TIGR00436 era: GTP-binding protein Era 27 299 2.1E-110 T 13-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002498 cd6f619fb489f34300907dea4c0f3b77 320 Hamap MF_00367 GTPase Era [era]. 24 316 35.738 T 13-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002498 cd6f619fb489f34300907dea4c0f3b77 320 SUPERFAMILY SSF52540 29 224 5.65E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002498 cd6f619fb489f34300907dea4c0f3b77 320 Gene3D G3DSA:3.40.50.300 20 202 1.0E-51 T 13-10-2018 VEA_002498 cd6f619fb489f34300907dea4c0f3b77 320 Gene3D G3DSA:3.30.300.20 204 318 1.7E-42 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta VEA_002498 cd6f619fb489f34300907dea4c0f3b77 320 Pfam PF01926 50S ribosome-binding GTPase 29 143 2.8E-23 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 VEA_002498 cd6f619fb489f34300907dea4c0f3b77 320 SUPERFAMILY SSF54814 200 316 2.75E-41 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 VEA_002498 cd6f619fb489f34300907dea4c0f3b77 320 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 26 188 9.0E-39 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VEA_003845 ed14563d7687456bd4cd543c472abe1e 204 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 6 203 5.7E-69 T 13-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 VEA_003845 ed14563d7687456bd4cd543c472abe1e 204 Gene3D G3DSA:3.40.50.880 2 204 1.3E-73 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VEA_003845 ed14563d7687456bd4cd543c472abe1e 204 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 5 204 33.74 T 13-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 VEA_003845 ed14563d7687456bd4cd543c472abe1e 204 Pfam PF00117 Glutamine amidotransferase class-I 8 202 7.6E-18 T 13-10-2018 IPR017926 Glutamine amidotransferase VEA_003845 ed14563d7687456bd4cd543c472abe1e 204 PIRSF PIRSF000495 4 204 9.9E-65 T 13-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 VEA_003845 ed14563d7687456bd4cd543c472abe1e 204 SUPERFAMILY SSF52317 5 203 3.97E-53 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VEA_003567 9c1fc3c1ce5b6b79b2c8af10cf7b9391 740 Pfam PF00593 TonB dependent receptor 270 738 1.9E-44 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VEA_003567 9c1fc3c1ce5b6b79b2c8af10cf7b9391 740 Gene3D G3DSA:2.40.170.20 180 740 7.5E-113 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VEA_003567 9c1fc3c1ce5b6b79b2c8af10cf7b9391 740 Gene3D G3DSA:2.170.130.10 40 177 7.1E-40 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VEA_003567 9c1fc3c1ce5b6b79b2c8af10cf7b9391 740 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 65 721 2.9E-104 T 13-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 VEA_003567 9c1fc3c1ce5b6b79b2c8af10cf7b9391 740 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 166 1.6E-24 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain VEA_003567 9c1fc3c1ce5b6b79b2c8af10cf7b9391 740 SUPERFAMILY SSF56935 55 740 8.33E-129 T 13-10-2018 VEA_001258 f29e9808178ce91f99abac20333573ae 749 Gene3D G3DSA:2.60.120.260 588 726 1.8E-13 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily VEA_001258 f29e9808178ce91f99abac20333573ae 749 SUPERFAMILY SSF49785 605 708 1.15E-17 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily VEA_001258 f29e9808178ce91f99abac20333573ae 749 Pfam PF01483 Proprotein convertase P-domain 621 705 9.9E-20 T 13-10-2018 IPR002884 P domain GO:0004252|GO:0006508 VEA_001258 f29e9808178ce91f99abac20333573ae 749 SUPERFAMILY SSF55486 171 486 9.53E-40 T 13-10-2018 VEA_004350 a03cd9a0548ca6e52d3c8ba8938d7922 323 Pfam PF13413 Helix-turn-helix domain 20 78 1.2E-19 T 13-10-2018 VEA_004350 a03cd9a0548ca6e52d3c8ba8938d7922 323 Pfam PF13464 Domain of unknown function (DUF4115) 248 321 7.0E-26 T 13-10-2018 IPR025194 Domain of unknown function DUF4115 VEA_004350 a03cd9a0548ca6e52d3c8ba8938d7922 323 SUPERFAMILY SSF47413 14 82 6.48E-8 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEA_004350 a03cd9a0548ca6e52d3c8ba8938d7922 323 Gene3D G3DSA:1.10.260.40 7 116 3.4E-25 T 13-10-2018 VEA_004350 a03cd9a0548ca6e52d3c8ba8938d7922 323 SMART SM00530 19 80 2.1E-4 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VEA_002291 c83bac350462509ff4d0741d28800638 328 Gene3D G3DSA:2.130.10.10 23 108 2.7E-6 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VEA_002291 c83bac350462509ff4d0741d28800638 328 SMART SM00320 151 189 2.1E-5 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 VEA_002291 c83bac350462509ff4d0741d28800638 328 SMART SM00320 192 230 0.035 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 VEA_002291 c83bac350462509ff4d0741d28800638 328 SMART SM00320 285 323 170.0 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 VEA_002291 c83bac350462509ff4d0741d28800638 328 SMART SM00320 23 62 200.0 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 VEA_002291 c83bac350462509ff4d0741d28800638 328 SMART SM00320 68 106 6.9 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 VEA_002291 c83bac350462509ff4d0741d28800638 328 SMART SM00320 233 274 0.28 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 VEA_002291 c83bac350462509ff4d0741d28800638 328 SUPERFAMILY SSF50998 28 328 2.75E-46 T 13-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily VEA_002291 c83bac350462509ff4d0741d28800638 328 Gene3D G3DSA:2.130.10.10 109 328 4.1E-37 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VEA_002291 c83bac350462509ff4d0741d28800638 328 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 176 190 - T 13-10-2018 IPR019775 WD40 repeat, conserved site VEA_002291 c83bac350462509ff4d0741d28800638 328 Pfam PF13360 PQQ-like domain 170 286 8.4E-6 T 13-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat VEA_003054 6c6b64110028de3de711b432a3fb5a7c 342 SUPERFAMILY SSF51726 3 339 3.53E-70 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VEA_003054 6c6b64110028de3de711b432a3fb5a7c 342 PIRSF PIRSF005632 1 342 1.2E-195 T 13-10-2018 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit VEA_003054 6c6b64110028de3de711b432a3fb5a7c 342 Gene3D G3DSA:3.20.20.210 1 342 1.2E-136 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VEA_003054 6c6b64110028de3de711b432a3fb5a7c 342 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 5 329 3.2E-37 T 13-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VEA_001134 f2cb9fca11538b13a5b320d889391080 217 SUPERFAMILY SSF55469 1 216 1.06E-66 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VEA_001134 f2cb9fca11538b13a5b320d889391080 217 Pfam PF00881 Nitroreductase family 8 193 7.6E-27 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 VEA_001134 f2cb9fca11538b13a5b320d889391080 217 Gene3D G3DSA:3.40.109.10 1 217 5.6E-63 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VEA_000692 54ed7ace8b767fe90e2880532951eaa2 294 Gene3D G3DSA:3.40.190.10 159 262 2.6E-34 T 13-10-2018 VEA_000692 54ed7ace8b767fe90e2880532951eaa2 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 3.0E-19 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000692 54ed7ace8b767fe90e2880532951eaa2 294 Gene3D G3DSA:1.10.10.10 5 94 7.3E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000692 54ed7ace8b767fe90e2880532951eaa2 294 SUPERFAMILY SSF46785 2 82 5.75E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000692 54ed7ace8b767fe90e2880532951eaa2 294 SUPERFAMILY SSF53850 88 293 3.08E-23 T 13-10-2018 VEA_000692 54ed7ace8b767fe90e2880532951eaa2 294 Gene3D G3DSA:3.40.190.10 100 289 2.6E-34 T 13-10-2018 VEA_000692 54ed7ace8b767fe90e2880532951eaa2 294 Pfam PF03466 LysR substrate binding domain 87 293 1.5E-20 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_000692 54ed7ace8b767fe90e2880532951eaa2 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 6.1E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000692 54ed7ace8b767fe90e2880532951eaa2 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 6.1E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000692 54ed7ace8b767fe90e2880532951eaa2 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 6.1E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_001241 a8dbd1494eba1d6f686332545cfe5cde 279 Pfam PF02361 Cobalt transport protein 17 236 3.4E-32 T 13-10-2018 IPR003339 ABC/ECF transporter, transmembrane component VEA_002409 7da4bfe6dd3dae8883d8ca902f5e1507 267 SUPERFAMILY SSF52540 6 239 2.21E-65 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002409 7da4bfe6dd3dae8883d8ca902f5e1507 267 Gene3D G3DSA:3.40.50.300 4 254 8.1E-67 T 13-10-2018 VEA_002409 7da4bfe6dd3dae8883d8ca902f5e1507 267 Pfam PF00005 ABC transporter 23 170 2.0E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_002409 7da4bfe6dd3dae8883d8ca902f5e1507 267 SMART SM00382 31 228 2.2E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_002409 7da4bfe6dd3dae8883d8ca902f5e1507 267 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_001714 dd1060e53dec82f0257041c483bb15ae 206 Gene3D G3DSA:3.10.50.40 68 206 1.6E-49 T 13-10-2018 VEA_001714 dd1060e53dec82f0257041c483bb15ae 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 117 203 3.4E-26 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VEA_001714 dd1060e53dec82f0257041c483bb15ae 206 SUPERFAMILY SSF54534 7 205 1.18E-53 T 13-10-2018 VEA_001714 dd1060e53dec82f0257041c483bb15ae 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 3 108 3.7E-23 T 13-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 VEA_001714 dd1060e53dec82f0257041c483bb15ae 206 Gene3D G3DSA:1.10.287.460 4 67 2.6E-19 T 13-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 VEA_001671 4f99f951ea71b7d26f834aa8d5b0005f 391 SUPERFAMILY SSF82051 2 157 4.05E-55 T 13-10-2018 IPR036726 GTP1/OBG domain superfamily VEA_001671 4f99f951ea71b7d26f834aa8d5b0005f 391 Gene3D G3DSA:2.70.210.12 1 158 4.4E-58 T 13-10-2018 IPR036726 GTP1/OBG domain superfamily VEA_001671 4f99f951ea71b7d26f834aa8d5b0005f 391 SUPERFAMILY SSF52540 151 340 1.07E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001671 4f99f951ea71b7d26f834aa8d5b0005f 391 Pfam PF01926 50S ribosome-binding GTPase 161 284 4.1E-23 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 VEA_001671 4f99f951ea71b7d26f834aa8d5b0005f 391 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 4.8E-143 T 13-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 VEA_001671 4f99f951ea71b7d26f834aa8d5b0005f 391 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 13-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 VEA_001671 4f99f951ea71b7d26f834aa8d5b0005f 391 Hamap MF_01454 GTPase Obg [obg]. 2 333 46.99 T 13-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 VEA_001671 4f99f951ea71b7d26f834aa8d5b0005f 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 7.2E-34 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 VEA_001671 4f99f951ea71b7d26f834aa8d5b0005f 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 7.2E-34 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 VEA_001671 4f99f951ea71b7d26f834aa8d5b0005f 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 7.2E-34 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 VEA_001671 4f99f951ea71b7d26f834aa8d5b0005f 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 7.2E-34 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 VEA_001671 4f99f951ea71b7d26f834aa8d5b0005f 391 PIRSF PIRSF002401 1 375 5.9E-137 T 13-10-2018 IPR035101 GTP-binding protein, Obg-type VEA_001671 4f99f951ea71b7d26f834aa8d5b0005f 391 Gene3D G3DSA:3.40.50.300 159 335 1.3E-51 T 13-10-2018 VEA_001671 4f99f951ea71b7d26f834aa8d5b0005f 391 Pfam PF01018 GTP1/OBG 4 156 1.1E-55 T 13-10-2018 IPR006169 GTP1/OBG domain VEA_002407 3d8a25bb4a413681b46c942a1a55fc85 323 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 45 313 3.3E-113 T 13-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 VEA_002407 3d8a25bb4a413681b46c942a1a55fc85 323 PIRSF PIRSF004692 1 323 2.2E-131 T 13-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 VEA_002407 3d8a25bb4a413681b46c942a1a55fc85 323 Gene3D G3DSA:3.40.50.10490 4 195 2.4E-64 T 13-10-2018 VEA_002407 3d8a25bb4a413681b46c942a1a55fc85 323 Pfam PF00571 CBS domain 268 320 5.1E-7 T 13-10-2018 IPR000644 CBS domain VEA_002407 3d8a25bb4a413681b46c942a1a55fc85 323 Pfam PF00571 CBS domain 211 258 2.6E-4 T 13-10-2018 IPR000644 CBS domain VEA_002407 3d8a25bb4a413681b46c942a1a55fc85 323 SMART SM00116 210 258 0.76 T 13-10-2018 IPR000644 CBS domain VEA_002407 3d8a25bb4a413681b46c942a1a55fc85 323 SMART SM00116 275 322 2.7 T 13-10-2018 IPR000644 CBS domain VEA_002407 3d8a25bb4a413681b46c942a1a55fc85 323 Pfam PF01380 SIS domain 41 172 2.2E-32 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VEA_002407 3d8a25bb4a413681b46c942a1a55fc85 323 SUPERFAMILY SSF53697 11 286 1.22E-68 T 13-10-2018 VEA_002407 3d8a25bb4a413681b46c942a1a55fc85 323 Gene3D G3DSA:3.10.580.10 196 320 1.6E-43 T 13-10-2018 VEA_003942 92fe584109e6228be4eaf085d84d0846 187 Pfam PF04993 TfoX N-terminal domain 3 94 1.6E-30 T 13-10-2018 IPR007076 TfoX, N-terminal VEA_003942 92fe584109e6228be4eaf085d84d0846 187 PIRSF PIRSF028788 1 187 1.9E-50 T 13-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type VEA_003942 92fe584109e6228be4eaf085d84d0846 187 Gene3D G3DSA:1.10.150.20 105 187 2.1E-22 T 13-10-2018 VEA_003942 92fe584109e6228be4eaf085d84d0846 187 Gene3D G3DSA:3.30.1460.30 1 96 9.4E-36 T 13-10-2018 VEA_003942 92fe584109e6228be4eaf085d84d0846 187 SUPERFAMILY SSF159894 2 94 3.92E-30 T 13-10-2018 VEA_003942 92fe584109e6228be4eaf085d84d0846 187 Pfam PF04994 TfoX C-terminal domain 106 184 1.0E-30 T 13-10-2018 IPR007077 TfoX, C-terminal VEA_001275 b7d375e8d0cfd0f3359a0b42824230ad 222 Gene3D G3DSA:3.40.50.2300 6 146 1.9E-35 T 13-10-2018 VEA_001275 b7d375e8d0cfd0f3359a0b42824230ad 222 SUPERFAMILY SSF46894 151 213 3.74E-20 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEA_001275 b7d375e8d0cfd0f3359a0b42824230ad 222 Pfam PF00196 Bacterial regulatory proteins, luxR family 156 211 9.3E-21 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_001275 b7d375e8d0cfd0f3359a0b42824230ad 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 171 2.1E-14 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_001275 b7d375e8d0cfd0f3359a0b42824230ad 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 187 2.1E-14 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_001275 b7d375e8d0cfd0f3359a0b42824230ad 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 199 2.1E-14 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_001275 b7d375e8d0cfd0f3359a0b42824230ad 222 Gene3D G3DSA:1.10.10.10 151 215 3.1E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001275 b7d375e8d0cfd0f3359a0b42824230ad 222 SMART SM00421 154 211 3.4E-24 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_001275 b7d375e8d0cfd0f3359a0b42824230ad 222 ProSitePatterns PS00622 LuxR-type HTH domain signature. 171 198 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_002771 b416f79a1a2e41a72ba213d4753c9b9e 248 Gene3D G3DSA:3.40.50.150 55 188 3.1E-15 T 13-10-2018 VEA_002771 b416f79a1a2e41a72ba213d4753c9b9e 248 Pfam PF08241 Methyltransferase domain 61 125 1.1E-9 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 VEA_002771 b416f79a1a2e41a72ba213d4753c9b9e 248 SUPERFAMILY SSF53335 73 212 5.31E-20 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_000986 2866b260b36b42a98ac257c103e1c939 353 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 157 343 5.8E-81 T 13-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VEA_000986 2866b260b36b42a98ac257c103e1c939 353 SUPERFAMILY SSF142695 152 322 4.45E-64 T 13-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VEA_000986 2866b260b36b42a98ac257c103e1c939 353 Pfam PF08719 Domain of unknown function (DUF1768) 7 145 6.8E-37 T 13-10-2018 IPR012816 NADAR VEA_000986 2866b260b36b42a98ac257c103e1c939 353 Gene3D G3DSA:3.40.50.10990 152 323 2.5E-71 T 13-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VEA_000986 2866b260b36b42a98ac257c103e1c939 353 TIGRFAM TIGR02464 ribofla_fusion: conserved hypothetical protein 5 144 4.7E-35 T 13-10-2018 IPR012816 NADAR VEA_000986 2866b260b36b42a98ac257c103e1c939 353 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 151 346 44.125 T 13-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VEA_000986 2866b260b36b42a98ac257c103e1c939 353 Gene3D G3DSA:1.10.357.40 2 151 1.2E-57 T 13-10-2018 IPR037238 YbiA-like superfamily VEA_000986 2866b260b36b42a98ac257c103e1c939 353 Pfam PF00925 GTP cyclohydrolase II 158 320 1.6E-64 T 13-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VEA_000986 2866b260b36b42a98ac257c103e1c939 353 PIRSF PIRSF001259 1 353 1.4E-109 T 13-10-2018 VEA_000986 2866b260b36b42a98ac257c103e1c939 353 SUPERFAMILY SSF143990 4 145 1.96E-52 T 13-10-2018 IPR037238 YbiA-like superfamily VEA_002035 ec4cc6dcc2074e221c6a2ac7a820324c 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 4 368 5.8E-82 T 13-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 VEA_002035 ec4cc6dcc2074e221c6a2ac7a820324c 401 Pfam PF07690 Major Facilitator Superfamily 13 349 2.9E-36 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEA_002035 ec4cc6dcc2074e221c6a2ac7a820324c 401 Gene3D G3DSA:1.20.1720.10 8 377 6.0E-72 T 13-10-2018 VEA_002035 ec4cc6dcc2074e221c6a2ac7a820324c 401 SUPERFAMILY SSF103473 5 376 1.22E-51 T 13-10-2018 IPR036259 MFS transporter superfamily VEA_001327 719c8cfae04d17e5d0330a4ddea8d075 372 Pfam PF00005 ABC transporter 20 161 5.8E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_001327 719c8cfae04d17e5d0330a4ddea8d075 372 SUPERFAMILY SSF52540 4 244 3.06E-85 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001327 719c8cfae04d17e5d0330a4ddea8d075 372 Gene3D G3DSA:3.40.50.300 1 238 2.7E-75 T 13-10-2018 VEA_001327 719c8cfae04d17e5d0330a4ddea8d075 372 Gene3D G3DSA:2.40.50.140 287 344 3.0E-50 T 13-10-2018 VEA_001327 719c8cfae04d17e5d0330a4ddea8d075 372 SMART SM00382 28 210 2.1E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_001327 719c8cfae04d17e5d0330a4ddea8d075 372 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_001327 719c8cfae04d17e5d0330a4ddea8d075 372 Pfam PF08402 TOBE domain 281 353 1.4E-11 T 13-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VEA_001327 719c8cfae04d17e5d0330a4ddea8d075 372 Gene3D G3DSA:2.40.50.100 239 361 3.0E-50 T 13-10-2018 VEA_001327 719c8cfae04d17e5d0330a4ddea8d075 372 SUPERFAMILY SSF50331 236 364 4.13E-31 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VEA_004315 5388caf992fff60cb096d11f65075737 187 Gene3D G3DSA:2.40.160.20 15 187 6.4E-30 T 13-10-2018 VEA_004315 5388caf992fff60cb096d11f65075737 187 Pfam PF13505 Outer membrane protein beta-barrel domain 10 187 8.6E-26 T 13-10-2018 IPR027385 Outer membrane protein beta-barrel VEA_004315 5388caf992fff60cb096d11f65075737 187 SUPERFAMILY SSF56925 28 187 2.51E-32 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VEA_002145 909a8c8151a107761b49ef969e16a1e8 179 Pfam PF04345 Chorismate lyase 14 178 6.8E-57 T 13-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 VEA_002145 909a8c8151a107761b49ef969e16a1e8 179 Gene3D G3DSA:3.40.1410.10 9 174 1.6E-41 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VEA_002145 909a8c8151a107761b49ef969e16a1e8 179 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 15 174 23.339 T 13-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 VEA_002145 909a8c8151a107761b49ef969e16a1e8 179 SUPERFAMILY SSF64288 7 174 1.18E-44 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VEA_001950 a02b8de525a240de6b5becec8ea0e2fa 1041 SMART SM00091 491 558 0.0016 T 13-10-2018 IPR000014 PAS domain VEA_001950 a02b8de525a240de6b5becec8ea0e2fa 1041 Gene3D G3DSA:3.20.20.450 774 1035 1.1E-77 T 13-10-2018 IPR035919 EAL domain superfamily VEA_001950 a02b8de525a240de6b5becec8ea0e2fa 1041 Gene3D G3DSA:3.30.450.20 353 481 3.9E-8 T 13-10-2018 VEA_001950 a02b8de525a240de6b5becec8ea0e2fa 1041 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 609 773 2.7E-33 T 13-10-2018 IPR000160 GGDEF domain VEA_001950 a02b8de525a240de6b5becec8ea0e2fa 1041 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 362 486 2.3E-6 T 13-10-2018 IPR000014 PAS domain VEA_001950 a02b8de525a240de6b5becec8ea0e2fa 1041 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 488 609 1.4E-17 T 13-10-2018 IPR000014 PAS domain VEA_001950 a02b8de525a240de6b5becec8ea0e2fa 1041 Gene3D G3DSA:3.40.50.2300 79 277 1.8E-7 T 13-10-2018 VEA_001950 a02b8de525a240de6b5becec8ea0e2fa 1041 SUPERFAMILY SSF55785 354 477 1.12E-7 T 13-10-2018 IPR035965 PAS domain superfamily VEA_001950 a02b8de525a240de6b5becec8ea0e2fa 1041 Pfam PF00990 Diguanylate cyclase, GGDEF domain 613 770 1.5E-35 T 13-10-2018 IPR000160 GGDEF domain VEA_001950 a02b8de525a240de6b5becec8ea0e2fa 1041 SUPERFAMILY SSF141868 792 1038 1.24E-72 T 13-10-2018 IPR035919 EAL domain superfamily VEA_001950 a02b8de525a240de6b5becec8ea0e2fa 1041 SMART SM00267 602 774 2.0E-45 T 13-10-2018 IPR000160 GGDEF domain VEA_001950 a02b8de525a240de6b5becec8ea0e2fa 1041 SMART SM00086 564 602 0.39 T 13-10-2018 IPR001610 PAC motif VEA_001950 a02b8de525a240de6b5becec8ea0e2fa 1041 SMART SM00086 437 479 9.3 T 13-10-2018 IPR001610 PAC motif VEA_001950 a02b8de525a240de6b5becec8ea0e2fa 1041 Pfam PF00563 EAL domain 794 1028 7.4E-60 T 13-10-2018 IPR001633 EAL domain VEA_001950 a02b8de525a240de6b5becec8ea0e2fa 1041 SUPERFAMILY SSF55073 618 774 5.96E-41 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_001950 a02b8de525a240de6b5becec8ea0e2fa 1041 Pfam PF13426 PAS domain 502 601 3.8E-10 T 13-10-2018 IPR000014 PAS domain VEA_001950 a02b8de525a240de6b5becec8ea0e2fa 1041 Gene3D G3DSA:3.30.70.270 602 773 1.4E-46 T 13-10-2018 VEA_001950 a02b8de525a240de6b5becec8ea0e2fa 1041 Gene3D G3DSA:3.40.50.2300 137 258 1.8E-7 T 13-10-2018 VEA_001950 a02b8de525a240de6b5becec8ea0e2fa 1041 SUPERFAMILY SSF55785 476 600 3.22E-19 T 13-10-2018 IPR035965 PAS domain superfamily VEA_001950 a02b8de525a240de6b5becec8ea0e2fa 1041 Gene3D G3DSA:3.30.450.20 482 600 1.4E-18 T 13-10-2018 VEA_001950 a02b8de525a240de6b5becec8ea0e2fa 1041 SMART SM00052 786 1033 2.6E-65 T 13-10-2018 IPR001633 EAL domain VEA_003935 47cd70fbe62cf8f29bc201db67068b8b 241 Pfam PF04288 MukE-like family 10 235 9.0E-119 T 13-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 VEA_003935 47cd70fbe62cf8f29bc201db67068b8b 241 Gene3D G3DSA:1.10.10.2260 88 194 4.1E-49 T 13-10-2018 VEA_003935 47cd70fbe62cf8f29bc201db67068b8b 241 Gene3D G3DSA:1.10.10.2250 1 78 2.3E-34 T 13-10-2018 VEA_003935 47cd70fbe62cf8f29bc201db67068b8b 241 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 10 238 49.535 T 13-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 VEA_003768 9e6fae698c33488ebf670480a78d676a 374 Gene3D G3DSA:2.40.370.10 253 374 1.1E-22 T 13-10-2018 IPR023374 AttH-like domain superfamily VEA_003768 9e6fae698c33488ebf670480a78d676a 374 Gene3D G3DSA:2.40.370.10 67 251 8.7E-54 T 13-10-2018 IPR023374 AttH-like domain superfamily VEA_003768 9e6fae698c33488ebf670480a78d676a 374 Pfam PF17186 Lipocalin-like domain 252 374 7.1E-34 T 13-10-2018 VEA_003768 9e6fae698c33488ebf670480a78d676a 374 SUPERFAMILY SSF159245 56 374 4.18E-94 T 13-10-2018 VEA_003768 9e6fae698c33488ebf670480a78d676a 374 Pfam PF07143 CrtC N-terminal lipocalin domain 79 248 8.4E-45 T 13-10-2018 IPR010791 AttH domain VEA_000740 5257bc769fdd20107b4461956d7f85b7 120 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site VEA_000740 5257bc769fdd20107b4461956d7f85b7 120 PIRSF PIRSF002889 1 120 4.5E-33 T 13-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 VEA_000740 5257bc769fdd20107b4461956d7f85b7 120 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 118 2.8E-33 T 13-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 VEA_000740 5257bc769fdd20107b4461956d7f85b7 120 Pfam PF00460 Flagella basal body rod protein 11 38 2.7E-7 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VEA_004419 99ce4657b6537af711e0c5f05d8e7055 942 Pfam PF06827 Zinc finger found in FPG and IleRS 902 930 6.0E-7 T 13-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 VEA_004419 99ce4657b6537af711e0c5f05d8e7055 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 5.1E-32 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VEA_004419 99ce4657b6537af711e0c5f05d8e7055 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 241 264 5.1E-32 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VEA_004419 99ce4657b6537af711e0c5f05d8e7055 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 406 421 5.1E-32 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VEA_004419 99ce4657b6537af711e0c5f05d8e7055 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 531 544 5.1E-32 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VEA_004419 99ce4657b6537af711e0c5f05d8e7055 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 566 575 5.1E-32 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VEA_004419 99ce4657b6537af711e0c5f05d8e7055 942 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 933 21.504 T 13-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 VEA_004419 99ce4657b6537af711e0c5f05d8e7055 942 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEA_004419 99ce4657b6537af711e0c5f05d8e7055 942 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 848 4.3E-294 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VEA_004419 99ce4657b6537af711e0c5f05d8e7055 942 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 645 2.3E-219 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEA_004419 99ce4657b6537af711e0c5f05d8e7055 942 Gene3D G3DSA:3.90.740.10 195 413 1.1E-241 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VEA_004419 99ce4657b6537af711e0c5f05d8e7055 942 SUPERFAMILY SSF50677 203 408 1.78E-54 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VEA_004419 99ce4657b6537af711e0c5f05d8e7055 942 Gene3D G3DSA:3.40.50.620 25 634 1.1E-241 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_004419 99ce4657b6537af711e0c5f05d8e7055 942 Gene3D G3DSA:1.10.730.20 645 934 5.4E-87 T 13-10-2018 VEA_004419 99ce4657b6537af711e0c5f05d8e7055 942 SUPERFAMILY SSF52374 4 652 4.38E-139 T 13-10-2018 VEA_004419 99ce4657b6537af711e0c5f05d8e7055 942 SUPERFAMILY SSF47323 657 933 7.66E-75 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEA_004419 99ce4657b6537af711e0c5f05d8e7055 942 Pfam PF08264 Anticodon-binding domain of tRNA 690 846 2.7E-26 T 13-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 VEA_004215 55921d4f4a23805703f893950a402feb 492 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 1 477 22.657 T 13-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 VEA_004215 55921d4f4a23805703f893950a402feb 492 SUPERFAMILY SSF56317 200 472 8.24E-40 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VEA_004215 55921d4f4a23805703f893950a402feb 492 Pfam PF00795 Carbon-nitrogen hydrolase 208 457 6.5E-37 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 VEA_004215 55921d4f4a23805703f893950a402feb 492 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 48 440 3.1E-97 T 13-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 VEA_004215 55921d4f4a23805703f893950a402feb 492 Gene3D G3DSA:3.60.110.10 198 465 7.2E-15 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VEA_004417 61141964544357d03cfd4dbe02b0a117 143 Gene3D G3DSA:3.10.50.40 13 140 2.4E-43 T 13-10-2018 VEA_004417 61141964544357d03cfd4dbe02b0a117 143 Gene3D G3DSA:2.40.10.330 72 128 2.4E-43 T 13-10-2018 VEA_004417 61141964544357d03cfd4dbe02b0a117 143 SUPERFAMILY SSF54534 4 142 3.14E-36 T 13-10-2018 VEA_004417 61141964544357d03cfd4dbe02b0a117 143 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 139 8.1E-13 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VEA_003204 f1dbaddb9e27326ad37b9058661f3a4e 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 5.7E-16 T 13-10-2018 IPR021681 Protein of unknown function DUF3265 VEA_000496 54730d184124f61d80a68e5d3ae8b9a9 520 Gene3D G3DSA:1.10.287.950 193 518 6.6E-55 T 13-10-2018 VEA_000496 54730d184124f61d80a68e5d3ae8b9a9 520 SUPERFAMILY SSF58104 263 517 1.96E-58 T 13-10-2018 VEA_000496 54730d184124f61d80a68e5d3ae8b9a9 520 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 12 112 1.2E-13 T 13-10-2018 IPR000014 PAS domain VEA_000496 54730d184124f61d80a68e5d3ae8b9a9 520 SMART SM00283 257 518 1.8E-45 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_000496 54730d184124f61d80a68e5d3ae8b9a9 520 Gene3D G3DSA:3.30.450.20 4 121 9.4E-24 T 13-10-2018 VEA_000496 54730d184124f61d80a68e5d3ae8b9a9 520 SUPERFAMILY SSF55785 18 114 2.62E-25 T 13-10-2018 IPR035965 PAS domain superfamily VEA_000496 54730d184124f61d80a68e5d3ae8b9a9 520 SMART SM00091 8 75 0.0032 T 13-10-2018 IPR000014 PAS domain VEA_000496 54730d184124f61d80a68e5d3ae8b9a9 520 Pfam PF08447 PAS fold 31 114 4.7E-14 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 VEA_000496 54730d184124f61d80a68e5d3ae8b9a9 520 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 334 484 2.2E-34 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_003556 159c46ed4eccd1d021e94f1f86f31daf 513 Pfam PF00990 Diguanylate cyclase, GGDEF domain 357 508 4.3E-34 T 13-10-2018 IPR000160 GGDEF domain VEA_003556 159c46ed4eccd1d021e94f1f86f31daf 513 SUPERFAMILY SSF55073 362 511 1.65E-37 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_003556 159c46ed4eccd1d021e94f1f86f31daf 513 Pfam PF03924 CHASE domain 84 272 4.3E-23 T 13-10-2018 IPR006189 CHASE domain VEA_003556 159c46ed4eccd1d021e94f1f86f31daf 513 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 353 511 5.8E-33 T 13-10-2018 IPR000160 GGDEF domain VEA_003556 159c46ed4eccd1d021e94f1f86f31daf 513 SMART SM00267 346 512 9.2E-44 T 13-10-2018 IPR000160 GGDEF domain VEA_003556 159c46ed4eccd1d021e94f1f86f31daf 513 Gene3D G3DSA:3.30.70.270 351 512 1.6E-44 T 13-10-2018 VEA_003556 159c46ed4eccd1d021e94f1f86f31daf 513 SMART SM01079 75 274 1.2E-26 T 13-10-2018 IPR006189 CHASE domain VEA_002690 696d7901cadf5bd488534abed9b93d65 367 Pfam PF03562 MltA specific insert domain 69 251 1.3E-37 T 13-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 VEA_002690 696d7901cadf5bd488534abed9b93d65 367 SMART SM00925 119 252 1.7E-65 T 13-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 VEA_002690 696d7901cadf5bd488534abed9b93d65 367 Gene3D G3DSA:2.40.40.10 51 348 2.1E-133 T 13-10-2018 IPR036908 RlpA-like domain superfamily VEA_002690 696d7901cadf5bd488534abed9b93d65 367 Gene3D G3DSA:2.40.240.50 119 257 2.1E-133 T 13-10-2018 VEA_002690 696d7901cadf5bd488534abed9b93d65 367 Pfam PF06725 3D domain 272 348 5.2E-21 T 13-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 VEA_002690 696d7901cadf5bd488534abed9b93d65 367 SUPERFAMILY SSF50685 22 350 3.84E-101 T 13-10-2018 IPR036908 RlpA-like domain superfamily VEA_003842 fafa902332a4f4ccfde6edd2b4ecbffb 211 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 120 206 19.491 T 13-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 VEA_003842 fafa902332a4f4ccfde6edd2b4ecbffb 211 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 13 211 37.374 T 13-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 VEA_003842 fafa902332a4f4ccfde6edd2b4ecbffb 211 Gene3D G3DSA:3.10.20.400 3 102 6.3E-36 T 13-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 VEA_003842 fafa902332a4f4ccfde6edd2b4ecbffb 211 SUPERFAMILY SSF141734 14 122 1.1E-44 T 13-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 VEA_003842 fafa902332a4f4ccfde6edd2b4ecbffb 211 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 123 210 4.4E-18 T 13-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 VEA_003842 fafa902332a4f4ccfde6edd2b4ecbffb 211 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 38 110 3.3E-31 T 13-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 VEA_003842 fafa902332a4f4ccfde6edd2b4ecbffb 211 Gene3D G3DSA:1.10.287.1080 120 211 9.5E-30 T 13-10-2018 VEA_003842 fafa902332a4f4ccfde6edd2b4ecbffb 211 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 61 110 7.0E-22 T 13-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 VEA_003842 fafa902332a4f4ccfde6edd2b4ecbffb 211 SUPERFAMILY SSF101386 123 210 1.72E-25 T 13-10-2018 VEA_003842 fafa902332a4f4ccfde6edd2b4ecbffb 211 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 123 206 7.1E-32 T 13-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 VEA_004380 8f10e9165ac7a7cbd68a56c22a4aeeb6 734 SUPERFAMILY SSF161098 502 720 8.63E-19 T 13-10-2018 IPR035906 MetI-like superfamily VEA_004380 8f10e9165ac7a7cbd68a56c22a4aeeb6 734 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 452 728 4.0E-13 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_004380 8f10e9165ac7a7cbd68a56c22a4aeeb6 734 Gene3D G3DSA:1.10.3720.10 496 731 3.5E-22 T 13-10-2018 IPR035906 MetI-like superfamily VEA_004380 8f10e9165ac7a7cbd68a56c22a4aeeb6 734 SUPERFAMILY SSF161098 421 528 2.62E-7 T 13-10-2018 IPR035906 MetI-like superfamily VEA_002065 eb6efe413e9171295bcdfb73169766aa 185 Gene3D G3DSA:3.90.870.10 1 183 5.3E-63 T 13-10-2018 VEA_002065 eb6efe413e9171295bcdfb73169766aa 185 Pfam PF01300 Telomere recombination 10 185 5.2E-50 T 13-10-2018 IPR006070 YrdC-like domain GO:0003725 VEA_002065 eb6efe413e9171295bcdfb73169766aa 185 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 1 183 40.922 T 13-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 VEA_002065 eb6efe413e9171295bcdfb73169766aa 185 SUPERFAMILY SSF55821 2 182 1.86E-58 T 13-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VEA_002065 eb6efe413e9171295bcdfb73169766aa 185 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 4 185 1.4E-39 T 13-10-2018 IPR006070 YrdC-like domain GO:0003725 VEA_002459 ba71af00938ea84bb99a48fe5d76bcb6 368 Gene3D G3DSA:3.30.450.90 1 97 3.5E-23 T 13-10-2018 VEA_002459 ba71af00938ea84bb99a48fe5d76bcb6 368 Pfam PF00437 Type II/IV secretion system protein 116 268 3.2E-36 T 13-10-2018 IPR001482 Type II/IV secretion system protein VEA_002459 ba71af00938ea84bb99a48fe5d76bcb6 368 SUPERFAMILY SSF52540 4 334 7.55E-68 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002459 ba71af00938ea84bb99a48fe5d76bcb6 368 Gene3D G3DSA:3.40.50.300 99 356 3.2E-87 T 13-10-2018 VEA_002459 ba71af00938ea84bb99a48fe5d76bcb6 368 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 2.1E-126 T 13-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 VEA_001963 4f56bb9d9054ffbb15b2b7584bbedd3d 311 Gene3D G3DSA:1.10.10.10 1 91 9.9E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001963 4f56bb9d9054ffbb15b2b7584bbedd3d 311 Gene3D G3DSA:3.40.190.10 92 297 7.1E-15 T 13-10-2018 VEA_001963 4f56bb9d9054ffbb15b2b7584bbedd3d 311 SUPERFAMILY SSF46785 7 88 4.69E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_001963 4f56bb9d9054ffbb15b2b7584bbedd3d 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 3.8E-15 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_001963 4f56bb9d9054ffbb15b2b7584bbedd3d 311 SUPERFAMILY SSF53850 92 300 6.52E-18 T 13-10-2018 VEA_001963 4f56bb9d9054ffbb15b2b7584bbedd3d 311 Gene3D G3DSA:3.40.190.10 173 274 7.1E-15 T 13-10-2018 VEA_001963 4f56bb9d9054ffbb15b2b7584bbedd3d 311 Pfam PF03466 LysR substrate binding domain 98 297 8.0E-11 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_001902 ff41cea86b696ab4609c52fae7e60ca8 180 Pfam PF13521 AAA domain 4 164 2.1E-39 T 13-10-2018 IPR038727 NadR/Ttd14, AAA domain VEA_001902 ff41cea86b696ab4609c52fae7e60ca8 180 SUPERFAMILY SSF52540 3 171 2.5E-18 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001902 ff41cea86b696ab4609c52fae7e60ca8 180 Gene3D G3DSA:3.40.50.300 1 168 1.9E-8 T 13-10-2018 VEA_003472 cd2d89454f1b3b009b1a7ea8117feae8 787 Pfam PF00702 haloacid dehalogenase-like hydrolase 497 694 3.4E-31 T 13-10-2018 VEA_003472 cd2d89454f1b3b009b1a7ea8117feae8 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 704 716 5.0E-24 T 13-10-2018 VEA_003472 cd2d89454f1b3b009b1a7ea8117feae8 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 629 639 5.0E-24 T 13-10-2018 VEA_003472 cd2d89454f1b3b009b1a7ea8117feae8 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 681 700 5.0E-24 T 13-10-2018 VEA_003472 cd2d89454f1b3b009b1a7ea8117feae8 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 353 367 5.0E-24 T 13-10-2018 VEA_003472 cd2d89454f1b3b009b1a7ea8117feae8 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 501 515 5.0E-24 T 13-10-2018 VEA_003472 cd2d89454f1b3b009b1a7ea8117feae8 787 SUPERFAMILY SSF81665 250 766 7.32E-12 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 VEA_003472 cd2d89454f1b3b009b1a7ea8117feae8 787 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 4 86 3.2E-27 T 13-10-2018 IPR021993 Putative metal-binding domain of cation transport ATPase VEA_003472 cd2d89454f1b3b009b1a7ea8117feae8 787 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 503 509 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 VEA_003472 cd2d89454f1b3b009b1a7ea8117feae8 787 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 279 761 4.5E-73 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 VEA_003472 cd2d89454f1b3b009b1a7ea8117feae8 787 SUPERFAMILY SSF81653 318 402 1.44E-22 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 VEA_003472 cd2d89454f1b3b009b1a7ea8117feae8 787 ProSitePatterns PS01229 Hypothetical cof family signature 2. 681 703 - T 13-10-2018 VEA_003472 cd2d89454f1b3b009b1a7ea8117feae8 787 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 228 783 5.5E-154 T 13-10-2018 VEA_003472 cd2d89454f1b3b009b1a7ea8117feae8 787 Gene3D G3DSA:2.70.150.20 292 407 1.0E-31 T 13-10-2018 VEA_003472 cd2d89454f1b3b009b1a7ea8117feae8 787 SUPERFAMILY SSF56784 500 781 2.16E-46 T 13-10-2018 IPR036412 HAD-like superfamily VEA_003472 cd2d89454f1b3b009b1a7ea8117feae8 787 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 245 783 1.7E-160 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VEA_003472 cd2d89454f1b3b009b1a7ea8117feae8 787 Gene3D G3DSA:3.40.1110.10 511 614 7.7E-67 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 VEA_003472 cd2d89454f1b3b009b1a7ea8117feae8 787 PRINTS PR00943 Copper-transporting ATPase signature 296 314 1.2E-6 T 13-10-2018 VEA_003472 cd2d89454f1b3b009b1a7ea8117feae8 787 PRINTS PR00943 Copper-transporting ATPase signature 659 676 1.2E-6 T 13-10-2018 VEA_003472 cd2d89454f1b3b009b1a7ea8117feae8 787 PRINTS PR00943 Copper-transporting ATPase signature 135 155 1.2E-6 T 13-10-2018 VEA_003472 cd2d89454f1b3b009b1a7ea8117feae8 787 PRINTS PR00943 Copper-transporting ATPase signature 276 295 1.2E-6 T 13-10-2018 VEA_003472 cd2d89454f1b3b009b1a7ea8117feae8 787 SUPERFAMILY SSF55008 86 162 3.14E-17 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 VEA_003472 cd2d89454f1b3b009b1a7ea8117feae8 787 Pfam PF00403 Heavy-metal-associated domain 93 154 1.5E-7 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VEA_003472 cd2d89454f1b3b009b1a7ea8117feae8 787 Pfam PF00122 E1-E2 ATPase 318 478 4.3E-45 T 13-10-2018 VEA_003472 cd2d89454f1b3b009b1a7ea8117feae8 787 Gene3D G3DSA:3.40.50.1000 482 720 7.7E-67 T 13-10-2018 IPR023214 HAD superfamily VEA_003472 cd2d89454f1b3b009b1a7ea8117feae8 787 Gene3D G3DSA:3.30.70.100 89 173 1.0E-13 T 13-10-2018 VEA_003472 cd2d89454f1b3b009b1a7ea8117feae8 787 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 272 785 5.2E-122 T 13-10-2018 VEA_000210 f3d10c1337185040fec41ca372580d07 1054 Gene3D G3DSA:3.20.20.80 304 651 4.5E-80 T 13-10-2018 VEA_000210 f3d10c1337185040fec41ca372580d07 1054 Gene3D G3DSA:3.20.20.80 764 785 5.6E-12 T 13-10-2018 VEA_000210 f3d10c1337185040fec41ca372580d07 1054 Gene3D G3DSA:2.60.40.10 98 189 5.0E-26 T 13-10-2018 IPR013783 Immunoglobulin-like fold VEA_000210 f3d10c1337185040fec41ca372580d07 1054 Gene3D G3DSA:2.10.10.20 994 1053 6.9E-18 T 13-10-2018 VEA_000210 f3d10c1337185040fec41ca372580d07 1054 Gene3D G3DSA:2.60.40.10 197 286 1.3E-18 T 13-10-2018 IPR013783 Immunoglobulin-like fold VEA_000210 f3d10c1337185040fec41ca372580d07 1054 Pfam PF00704 Glycosyl hydrolases family 18 323 782 2.5E-85 T 13-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 VEA_000210 f3d10c1337185040fec41ca372580d07 1054 SUPERFAMILY SSF51445 316 786 6.85E-74 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VEA_000210 f3d10c1337185040fec41ca372580d07 1054 SUPERFAMILY SSF51055 996 1053 5.62E-14 T 13-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VEA_000210 f3d10c1337185040fec41ca372580d07 1054 SMART SM00636 322 782 1.4E-120 T 13-10-2018 IPR011583 Chitinase II GO:0008061 VEA_000210 f3d10c1337185040fec41ca372580d07 1054 Gene3D G3DSA:2.10.10.20 16 88 4.9E-17 T 13-10-2018 VEA_000210 f3d10c1337185040fec41ca372580d07 1054 Pfam PF06483 Chitinase C 810 975 1.8E-72 T 13-10-2018 IPR009470 Chitinase, C-terminal KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VEA_000210 f3d10c1337185040fec41ca372580d07 1054 SUPERFAMILY SSF54556 629 752 1.31E-14 T 13-10-2018 IPR029070 Chitinase insertion domain superfamily VEA_000210 f3d10c1337185040fec41ca372580d07 1054 ProSitePatterns PS01095 Chitinases family 18 active site. 471 479 - T 13-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VEA_000210 f3d10c1337185040fec41ca372580d07 1054 Gene3D G3DSA:3.10.50.10 723 763 5.6E-12 T 13-10-2018 IPR029070 Chitinase insertion domain superfamily VEA_000210 f3d10c1337185040fec41ca372580d07 1054 Pfam PF14600 Cellulose-binding domain 999 1051 7.3E-15 T 13-10-2018 IPR032798 Endoglucanase Z, cellulose-binding domain KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VEA_000210 f3d10c1337185040fec41ca372580d07 1054 SUPERFAMILY SSF51055 22 86 1.44E-17 T 13-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VEA_000210 f3d10c1337185040fec41ca372580d07 1054 SMART SM00495 1009 1051 9.0E-8 T 13-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VEA_000210 f3d10c1337185040fec41ca372580d07 1054 SMART SM00495 37 82 1.5E-14 T 13-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VEA_002055 0165a25924344bf9e5557bd834c27107 427 Gene3D G3DSA:1.10.940.10 1 142 9.1E-45 T 13-10-2018 IPR035926 NusB-like superfamily VEA_002055 0165a25924344bf9e5557bd834c27107 427 Pfam PF01029 NusB family 1 123 2.1E-24 T 13-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VEA_002055 0165a25924344bf9e5557bd834c27107 427 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 313 324 - T 13-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 VEA_002055 0165a25924344bf9e5557bd834c27107 427 Pfam PF01189 16S rRNA methyltransferase RsmB/F 238 422 5.6E-69 T 13-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 VEA_002055 0165a25924344bf9e5557bd834c27107 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 219 233 2.2E-30 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VEA_002055 0165a25924344bf9e5557bd834c27107 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 248 258 2.2E-30 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VEA_002055 0165a25924344bf9e5557bd834c27107 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 314 326 2.2E-30 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VEA_002055 0165a25924344bf9e5557bd834c27107 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 407 424 2.2E-30 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VEA_002055 0165a25924344bf9e5557bd834c27107 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 364 380 2.2E-30 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VEA_002055 0165a25924344bf9e5557bd834c27107 427 SUPERFAMILY SSF53335 139 424 3.04E-78 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_002055 0165a25924344bf9e5557bd834c27107 427 Gene3D G3DSA:3.30.70.1170 170 227 6.3E-27 T 13-10-2018 VEA_002055 0165a25924344bf9e5557bd834c27107 427 Gene3D G3DSA:3.40.50.150 228 425 1.1E-70 T 13-10-2018 VEA_002055 0165a25924344bf9e5557bd834c27107 427 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 4 424 3.9E-153 T 13-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 VEA_002055 0165a25924344bf9e5557bd834c27107 427 SUPERFAMILY SSF48013 1 146 1.96E-36 T 13-10-2018 IPR035926 NusB-like superfamily VEA_002055 0165a25924344bf9e5557bd834c27107 427 Gene3D G3DSA:1.10.287.730 143 169 5.5E-14 T 13-10-2018 VEA_001541 b9f9082747bfbca1d8a81acf668725a9 279 Gene3D G3DSA:3.90.226.10 14 214 1.5E-59 T 13-10-2018 VEA_001541 b9f9082747bfbca1d8a81acf668725a9 279 SUPERFAMILY SSF52096 15 272 4.55E-69 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEA_001541 b9f9082747bfbca1d8a81acf668725a9 279 Gene3D G3DSA:1.10.12.10 217 279 1.1E-24 T 13-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal VEA_001541 b9f9082747bfbca1d8a81acf668725a9 279 Pfam PF00378 Enoyl-CoA hydratase/isomerase 25 273 2.7E-47 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 VEA_002733 7269dd173e4ee71c4d7859f6ac65d90b 287 Pfam PF00753 Metallo-beta-lactamase superfamily 34 119 5.7E-10 T 13-10-2018 IPR001279 Metallo-beta-lactamase VEA_002733 7269dd173e4ee71c4d7859f6ac65d90b 287 SUPERFAMILY SSF56281 29 274 1.49E-24 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEA_002733 7269dd173e4ee71c4d7859f6ac65d90b 287 Gene3D G3DSA:3.60.15.10 4 285 6.0E-49 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEA_002733 7269dd173e4ee71c4d7859f6ac65d90b 287 SMART SM00849 34 272 0.0055 T 13-10-2018 IPR001279 Metallo-beta-lactamase VEA_002713 c3abfa2b7f3760b1dc9ef9f46b63454d 334 PIRSF PIRSF006268 1 334 1.3E-94 T 13-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 VEA_002713 c3abfa2b7f3760b1dc9ef9f46b63454d 334 SUPERFAMILY SSF143631 24 332 2.54E-100 T 13-10-2018 IPR003374 ApbE-like superfamily VEA_002713 c3abfa2b7f3760b1dc9ef9f46b63454d 334 Pfam PF02424 ApbE family 31 310 2.0E-85 T 13-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 VEA_002713 c3abfa2b7f3760b1dc9ef9f46b63454d 334 Gene3D G3DSA:3.10.520.20 19 334 9.7E-113 T 13-10-2018 VEA_003773 0ab12e19e934bfc1d0f5bcd4e72592a3 492 SUPERFAMILY SSF51735 1 295 2.84E-45 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_003773 0ab12e19e934bfc1d0f5bcd4e72592a3 492 Gene3D G3DSA:3.40.50.720 2 260 1.6E-34 T 13-10-2018 VEA_003773 0ab12e19e934bfc1d0f5bcd4e72592a3 492 Pfam PF13460 NAD(P)H-binding 8 150 1.5E-14 T 13-10-2018 IPR016040 NAD(P)-binding domain VEA_003773 0ab12e19e934bfc1d0f5bcd4e72592a3 492 Pfam PF11066 Protein of unknown function (DUF2867) 333 466 4.0E-14 T 13-10-2018 IPR021295 Protein of unknown function DUF2867 VEA_000812 42ce3350d21298c758f355609e5708ee 336 Gene3D G3DSA:3.40.190.10 32 326 1.6E-89 T 13-10-2018 VEA_000812 42ce3350d21298c758f355609e5708ee 336 SUPERFAMILY SSF53850 29 327 6.19E-64 T 13-10-2018 VEA_000812 42ce3350d21298c758f355609e5708ee 336 Pfam PF16868 NMT1-like family 32 326 1.3E-111 T 13-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family VEA_000812 42ce3350d21298c758f355609e5708ee 336 Gene3D G3DSA:3.40.190.10 120 263 1.6E-89 T 13-10-2018 VEA_000812 42ce3350d21298c758f355609e5708ee 336 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 3 326 1.4E-107 T 13-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family VEA_001428 64b2fab9882fc479696f362bade418d3 404 Gene3D G3DSA:3.10.450.350 137 241 2.4E-32 T 13-10-2018 VEA_001428 64b2fab9882fc479696f362bade418d3 404 Pfam PF01551 Peptidase family M23 272 365 2.1E-32 T 13-10-2018 IPR016047 Peptidase M23 VEA_001428 64b2fab9882fc479696f362bade418d3 404 Gene3D G3DSA:2.70.70.10 242 372 2.0E-49 T 13-10-2018 IPR011055 Duplicated hybrid motif VEA_001428 64b2fab9882fc479696f362bade418d3 404 Gene3D G3DSA:3.10.450.350 43 135 8.4E-34 T 13-10-2018 VEA_001428 64b2fab9882fc479696f362bade418d3 404 SUPERFAMILY SSF51261 120 367 3.09E-68 T 13-10-2018 IPR011055 Duplicated hybrid motif VEA_001428 64b2fab9882fc479696f362bade418d3 404 Pfam PF04225 Opacity-associated protein A LysM-like domain 50 131 1.7E-6 T 13-10-2018 IPR007340 Opacity-associated protein A VEA_001175 b5e874a3146967f1cb8b111941ea1c63 256 Gene3D G3DSA:3.20.20.450 17 252 5.4E-10 T 13-10-2018 IPR035919 EAL domain superfamily VEA_001175 b5e874a3146967f1cb8b111941ea1c63 256 Pfam PF00563 EAL domain 22 241 2.1E-9 T 13-10-2018 IPR001633 EAL domain VEA_001175 b5e874a3146967f1cb8b111941ea1c63 256 SUPERFAMILY SSF141868 21 248 8.63E-10 T 13-10-2018 IPR035919 EAL domain superfamily VEA_000504 0f63322b0ee8a52a5a2d12c4ff8fcbb0 375 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 368 2.0E-83 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VEA_000504 0f63322b0ee8a52a5a2d12c4ff8fcbb0 375 Gene3D G3DSA:2.40.50.100 58 201 5.4E-75 T 13-10-2018 VEA_000504 0f63322b0ee8a52a5a2d12c4ff8fcbb0 375 SUPERFAMILY SSF111369 49 290 1.57E-62 T 13-10-2018 VEA_000504 0f63322b0ee8a52a5a2d12c4ff8fcbb0 375 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 54 283 3.7E-15 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VEA_000504 0f63322b0ee8a52a5a2d12c4ff8fcbb0 375 Gene3D G3DSA:1.10.287.470 93 166 5.4E-75 T 13-10-2018 VEA_000504 0f63322b0ee8a52a5a2d12c4ff8fcbb0 375 Gene3D G3DSA:2.40.420.20 277 368 1.2E-20 T 13-10-2018 VEA_000504 0f63322b0ee8a52a5a2d12c4ff8fcbb0 375 Gene3D G3DSA:2.40.30.170 52 276 5.4E-75 T 13-10-2018 VEA_001785 5814c38b6c3d61b02ee541d6628a893d 329 Pfam PF00571 CBS domain 279 324 3.4E-6 T 13-10-2018 IPR000644 CBS domain VEA_001785 5814c38b6c3d61b02ee541d6628a893d 329 Pfam PF00571 CBS domain 217 269 1.5E-6 T 13-10-2018 IPR000644 CBS domain VEA_001785 5814c38b6c3d61b02ee541d6628a893d 329 PIRSF PIRSF004692 9 329 1.8E-126 T 13-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 VEA_001785 5814c38b6c3d61b02ee541d6628a893d 329 Gene3D G3DSA:3.40.50.10490 14 209 1.6E-64 T 13-10-2018 VEA_001785 5814c38b6c3d61b02ee541d6628a893d 329 Gene3D G3DSA:3.10.580.10 210 329 1.7E-33 T 13-10-2018 VEA_001785 5814c38b6c3d61b02ee541d6628a893d 329 SUPERFAMILY SSF53697 23 326 5.56E-61 T 13-10-2018 VEA_001785 5814c38b6c3d61b02ee541d6628a893d 329 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 58 324 1.4E-105 T 13-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 VEA_001785 5814c38b6c3d61b02ee541d6628a893d 329 Pfam PF01380 SIS domain 54 185 2.8E-29 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VEA_001785 5814c38b6c3d61b02ee541d6628a893d 329 SMART SM00116 222 269 0.47 T 13-10-2018 IPR000644 CBS domain VEA_001785 5814c38b6c3d61b02ee541d6628a893d 329 SMART SM00116 286 328 3.0 T 13-10-2018 IPR000644 CBS domain VEA_002149 8b7488d80d87eb353365aba6d82c5076 207 Hamap MF_00015 LexA repressor [lexA]. 3 204 31.691 T 13-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 VEA_002149 8b7488d80d87eb353365aba6d82c5076 207 Gene3D G3DSA:2.10.109.10 85 207 5.5E-44 T 13-10-2018 VEA_002149 8b7488d80d87eb353365aba6d82c5076 207 Pfam PF00717 Peptidase S24-like 119 184 1.8E-15 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C VEA_002149 8b7488d80d87eb353365aba6d82c5076 207 SUPERFAMILY SSF46785 3 69 3.35E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_002149 8b7488d80d87eb353365aba6d82c5076 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 116 126 1.5E-13 T 13-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 VEA_002149 8b7488d80d87eb353365aba6d82c5076 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 127 138 1.5E-13 T 13-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 VEA_002149 8b7488d80d87eb353365aba6d82c5076 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 155 167 1.5E-13 T 13-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 VEA_002149 8b7488d80d87eb353365aba6d82c5076 207 TIGRFAM TIGR00498 lexA: repressor LexA 1 204 1.7E-80 T 13-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 VEA_002149 8b7488d80d87eb353365aba6d82c5076 207 Pfam PF01726 LexA DNA binding domain 1 65 4.5E-29 T 13-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 VEA_002149 8b7488d80d87eb353365aba6d82c5076 207 Gene3D G3DSA:1.10.10.10 1 69 1.2E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_002149 8b7488d80d87eb353365aba6d82c5076 207 SUPERFAMILY SSF51306 80 203 2.96E-36 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily VEA_001300 b2c6c25c1c79078ba37f719f75fad56e 510 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 212 225 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VEA_001300 b2c6c25c1c79078ba37f719f75fad56e 510 SUPERFAMILY SSF46689 461 509 1.43E-7 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_001300 b2c6c25c1c79078ba37f719f75fad56e 510 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 274 289 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VEA_001300 b2c6c25c1c79078ba37f719f75fad56e 510 Gene3D G3DSA:1.10.10.60 456 510 2.8E-11 T 13-10-2018 VEA_001300 b2c6c25c1c79078ba37f719f75fad56e 510 Gene3D G3DSA:3.30.450.40 4 172 4.0E-18 T 13-10-2018 IPR029016 GAF-like domain superfamily VEA_001300 b2c6c25c1c79078ba37f719f75fad56e 510 Gene3D G3DSA:3.40.50.300 176 358 2.8E-63 T 13-10-2018 VEA_001300 b2c6c25c1c79078ba37f719f75fad56e 510 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 401 410 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VEA_001300 b2c6c25c1c79078ba37f719f75fad56e 510 SUPERFAMILY SSF55781 9 167 3.49E-17 T 13-10-2018 VEA_001300 b2c6c25c1c79078ba37f719f75fad56e 510 Pfam PF01590 GAF domain 22 154 1.7E-9 T 13-10-2018 IPR003018 GAF domain GO:0005515 VEA_001300 b2c6c25c1c79078ba37f719f75fad56e 510 Gene3D G3DSA:1.10.8.60 359 424 5.2E-20 T 13-10-2018 VEA_001300 b2c6c25c1c79078ba37f719f75fad56e 510 SUPERFAMILY SSF52540 187 422 4.84E-68 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001300 b2c6c25c1c79078ba37f719f75fad56e 510 SMART SM00065 20 168 4.5E-10 T 13-10-2018 IPR003018 GAF domain GO:0005515 VEA_001300 b2c6c25c1c79078ba37f719f75fad56e 510 SMART SM00382 208 351 7.6E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_001300 b2c6c25c1c79078ba37f719f75fad56e 510 Pfam PF00158 Sigma-54 interaction domain 188 354 5.0E-68 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VEA_001264 fe73cc44f2b6657e83318c1077817055 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 283 3.4E-27 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_001264 fe73cc44f2b6657e83318c1077817055 287 Gene3D G3DSA:1.10.3720.10 61 285 8.9E-36 T 13-10-2018 IPR035906 MetI-like superfamily VEA_001264 fe73cc44f2b6657e83318c1077817055 287 SUPERFAMILY SSF161098 22 274 1.5E-42 T 13-10-2018 IPR035906 MetI-like superfamily VEA_001264 fe73cc44f2b6657e83318c1077817055 287 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 14 283 7.4E-100 T 13-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 VEA_004291 d637f7d746632c5400337b1ee08af666 637 Gene3D G3DSA:3.90.640.10 228 315 4.1E-166 T 13-10-2018 VEA_004291 d637f7d746632c5400337b1ee08af666 637 SUPERFAMILY SSF100920 383 539 4.05E-60 T 13-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 VEA_004291 d637f7d746632c5400337b1ee08af666 637 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VEA_004291 d637f7d746632c5400337b1ee08af666 637 PRINTS PR00301 70kDa heat shock protein signature 53 61 2.1E-78 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEA_004291 d637f7d746632c5400337b1ee08af666 637 PRINTS PR00301 70kDa heat shock protein signature 197 207 2.1E-78 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEA_004291 d637f7d746632c5400337b1ee08af666 637 PRINTS PR00301 70kDa heat shock protein signature 387 406 2.1E-78 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEA_004291 d637f7d746632c5400337b1ee08af666 637 PRINTS PR00301 70kDa heat shock protein signature 31 43 2.1E-78 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEA_004291 d637f7d746632c5400337b1ee08af666 637 PRINTS PR00301 70kDa heat shock protein signature 137 157 2.1E-78 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEA_004291 d637f7d746632c5400337b1ee08af666 637 PRINTS PR00301 70kDa heat shock protein signature 3 16 2.1E-78 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEA_004291 d637f7d746632c5400337b1ee08af666 637 PRINTS PR00301 70kDa heat shock protein signature 333 349 2.1E-78 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEA_004291 d637f7d746632c5400337b1ee08af666 637 PRINTS PR00301 70kDa heat shock protein signature 364 384 2.1E-78 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEA_004291 d637f7d746632c5400337b1ee08af666 637 PRINTS PR00301 70kDa heat shock protein signature 468 484 2.1E-78 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEA_004291 d637f7d746632c5400337b1ee08af666 637 SUPERFAMILY SSF53067 186 381 1.17E-65 T 13-10-2018 VEA_004291 d637f7d746632c5400337b1ee08af666 637 Gene3D G3DSA:2.60.34.10 382 522 8.6E-65 T 13-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 VEA_004291 d637f7d746632c5400337b1ee08af666 637 Gene3D G3DSA:1.20.1270.10 523 602 5.1E-27 T 13-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 VEA_004291 d637f7d746632c5400337b1ee08af666 637 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VEA_004291 d637f7d746632c5400337b1ee08af666 637 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VEA_004291 d637f7d746632c5400337b1ee08af666 637 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 3.7E-285 T 13-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 VEA_004291 d637f7d746632c5400337b1ee08af666 637 Gene3D G3DSA:3.30.420.40 5 378 4.1E-166 T 13-10-2018 VEA_004291 d637f7d746632c5400337b1ee08af666 637 SUPERFAMILY SSF53067 1 182 9.07E-65 T 13-10-2018 VEA_004291 d637f7d746632c5400337b1ee08af666 637 Gene3D G3DSA:3.30.420.40 179 365 4.1E-166 T 13-10-2018 VEA_004291 d637f7d746632c5400337b1ee08af666 637 SUPERFAMILY SSF100934 534 607 1.8E-5 T 13-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 VEA_004291 d637f7d746632c5400337b1ee08af666 637 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 632 36.176 T 13-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 VEA_004291 d637f7d746632c5400337b1ee08af666 637 Pfam PF00012 Hsp70 protein 4 601 4.1E-262 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEA_002806 cd3b1ce26e8f19d3a847ff314b8d2143 376 PRINTS PR00207 Flagellin signature 37 54 3.4E-26 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VEA_002806 cd3b1ce26e8f19d3a847ff314b8d2143 376 PRINTS PR00207 Flagellin signature 111 134 3.4E-26 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VEA_002806 cd3b1ce26e8f19d3a847ff314b8d2143 376 PRINTS PR00207 Flagellin signature 76 95 3.4E-26 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VEA_002806 cd3b1ce26e8f19d3a847ff314b8d2143 376 Pfam PF07196 Flagellin hook IN motif 199 247 1.3E-9 T 13-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VEA_002806 cd3b1ce26e8f19d3a847ff314b8d2143 376 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.4E-41 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VEA_002806 cd3b1ce26e8f19d3a847ff314b8d2143 376 Gene3D G3DSA:3.30.70.2120 174 274 7.2E-77 T 13-10-2018 VEA_002806 cd3b1ce26e8f19d3a847ff314b8d2143 376 Pfam PF00700 Bacterial flagellin C-terminal helical region 291 375 8.7E-26 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VEA_002806 cd3b1ce26e8f19d3a847ff314b8d2143 376 Gene3D G3DSA:1.10.8.410 327 375 2.8E-20 T 13-10-2018 VEA_002806 cd3b1ce26e8f19d3a847ff314b8d2143 376 Gene3D G3DSA:1.20.1330.10 44 326 7.2E-77 T 13-10-2018 VEA_002806 cd3b1ce26e8f19d3a847ff314b8d2143 376 SUPERFAMILY SSF64518 1 375 1.96E-94 T 13-10-2018 VEA_000365 6e165ddd115e7af348555b3b0cb33ad6 486 Gene3D G3DSA:3.40.605.10 8 472 2.4E-179 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VEA_000365 6e165ddd115e7af348555b3b0cb33ad6 486 SUPERFAMILY SSF53720 5 480 3.4E-171 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VEA_000365 6e165ddd115e7af348555b3b0cb33ad6 486 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 7 472 6.6E-203 T 13-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 VEA_000365 6e165ddd115e7af348555b3b0cb33ad6 486 Gene3D G3DSA:3.40.309.10 251 444 2.4E-179 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VEA_000365 6e165ddd115e7af348555b3b0cb33ad6 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 246 253 - T 13-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VEA_000365 6e165ddd115e7af348555b3b0cb33ad6 486 Pfam PF00171 Aldehyde dehydrogenase family 18 474 1.2E-176 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VEA_000365 6e165ddd115e7af348555b3b0cb33ad6 486 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 1 486 57.508 T 13-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 VEA_001899 f7e54e631c52d098881e89b56720a10b 144 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 144 6.0E-63 T 13-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 VEA_001899 f7e54e631c52d098881e89b56720a10b 144 Gene3D G3DSA:3.50.80.10 1 144 2.4E-53 T 13-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily VEA_001899 f7e54e631c52d098881e89b56720a10b 144 SUPERFAMILY SSF69500 2 143 6.67E-53 T 13-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily VEA_001899 f7e54e631c52d098881e89b56720a10b 144 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 144 32.46 T 13-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 VEA_001899 f7e54e631c52d098881e89b56720a10b 144 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 142 6.5E-51 T 13-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 VEA_004071 2392a4fd4cda0a0d65e68b564716b4ff 148 SUPERFAMILY SSF54637 10 144 2.37E-30 T 13-10-2018 IPR029069 HotDog domain superfamily VEA_004071 2392a4fd4cda0a0d65e68b564716b4ff 148 Pfam PF13279 Thioesterase-like superfamily 19 124 2.5E-12 T 13-10-2018 VEA_004071 2392a4fd4cda0a0d65e68b564716b4ff 148 Gene3D G3DSA:3.10.129.10 9 143 2.2E-24 T 13-10-2018 VEA_002750 7f43b769e7082ed158b218a438b92fc4 251 Pfam PF01255 Putative undecaprenyl diphosphate synthase 18 238 1.3E-80 T 13-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 VEA_002750 7f43b769e7082ed158b218a438b92fc4 251 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 184 201 - T 13-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 VEA_002750 7f43b769e7082ed158b218a438b92fc4 251 Gene3D G3DSA:3.40.1180.10 1 239 8.6E-94 T 13-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 VEA_002750 7f43b769e7082ed158b218a438b92fc4 251 SUPERFAMILY SSF64005 9 234 3.01E-88 T 13-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 VEA_002750 7f43b769e7082ed158b218a438b92fc4 251 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 11 239 39.785 T 13-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 VEA_002750 7f43b769e7082ed158b218a438b92fc4 251 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 11 238 3.1E-94 T 13-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 VEA_001294 87f6755923dd374a9ff0bba00d27e473 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 323 337 1.2E-14 T 13-10-2018 VEA_001294 87f6755923dd374a9ff0bba00d27e473 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 236 261 1.2E-14 T 13-10-2018 VEA_001294 87f6755923dd374a9ff0bba00d27e473 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 362 369 1.2E-14 T 13-10-2018 VEA_001294 87f6755923dd374a9ff0bba00d27e473 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 96 118 1.2E-14 T 13-10-2018 VEA_001294 87f6755923dd374a9ff0bba00d27e473 477 Gene3D G3DSA:3.50.50.60 98 370 1.3E-82 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_001294 87f6755923dd374a9ff0bba00d27e473 477 Gene3D G3DSA:3.30.390.120 406 464 9.0E-16 T 13-10-2018 VEA_001294 87f6755923dd374a9ff0bba00d27e473 477 Gene3D G3DSA:2.20.28.10 1 55 2.0E-25 T 13-10-2018 VEA_001294 87f6755923dd374a9ff0bba00d27e473 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 97 116 1.7E-22 T 13-10-2018 VEA_001294 87f6755923dd374a9ff0bba00d27e473 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 254 1.7E-22 T 13-10-2018 VEA_001294 87f6755923dd374a9ff0bba00d27e473 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 192 210 1.7E-22 T 13-10-2018 VEA_001294 87f6755923dd374a9ff0bba00d27e473 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 347 369 1.7E-22 T 13-10-2018 VEA_001294 87f6755923dd374a9ff0bba00d27e473 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 322 338 1.7E-22 T 13-10-2018 VEA_001294 87f6755923dd374a9ff0bba00d27e473 477 Pfam PF00301 Rubredoxin 3 49 8.8E-21 T 13-10-2018 IPR024935 Rubredoxin domain GO:0005506 VEA_001294 87f6755923dd374a9ff0bba00d27e473 477 SUPERFAMILY SSF57802 1 54 1.25E-20 T 13-10-2018 VEA_001294 87f6755923dd374a9ff0bba00d27e473 477 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 97 374 7.0E-51 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VEA_001294 87f6755923dd374a9ff0bba00d27e473 477 Gene3D G3DSA:3.50.50.60 200 334 1.3E-82 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_001294 87f6755923dd374a9ff0bba00d27e473 477 SUPERFAMILY SSF51905 97 372 2.24E-34 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_001294 87f6755923dd374a9ff0bba00d27e473 477 PRINTS PR00163 Rubredoxin signature 3 19 1.4E-6 T 13-10-2018 IPR024935 Rubredoxin domain GO:0005506 VEA_001294 87f6755923dd374a9ff0bba00d27e473 477 PRINTS PR00163 Rubredoxin signature 33 49 1.4E-6 T 13-10-2018 IPR024935 Rubredoxin domain GO:0005506 VEA_002507 a0034a08c9485d0df7710a1d6618ba97 433 Gene3D G3DSA:3.30.390.10 1 127 3.1E-55 T 13-10-2018 IPR029017 Enolase-like, N-terminal VEA_002507 a0034a08c9485d0df7710a1d6618ba97 433 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 430 2.2E-136 T 13-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEA_002507 a0034a08c9485d0df7710a1d6618ba97 433 SMART SM01193 4 134 2.8E-93 T 13-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEA_002507 a0034a08c9485d0df7710a1d6618ba97 433 ProSitePatterns PS00164 Enolase signature. 340 353 - T 13-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002507 a0034a08c9485d0df7710a1d6618ba97 433 Hamap MF_00318 Enolase [eno]. 2 417 44.408 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEA_002507 a0034a08c9485d0df7710a1d6618ba97 433 Pfam PF03952 Enolase, N-terminal domain 4 134 2.4E-58 T 13-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEA_002507 a0034a08c9485d0df7710a1d6618ba97 433 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 429 4.0E-206 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEA_002507 a0034a08c9485d0df7710a1d6618ba97 433 SUPERFAMILY SSF54826 3 138 1.96E-56 T 13-10-2018 VEA_002507 a0034a08c9485d0df7710a1d6618ba97 433 SMART SM01192 143 431 8.6E-213 T 13-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEA_002507 a0034a08c9485d0df7710a1d6618ba97 433 PRINTS PR00148 Enolase signature 369 386 4.0E-44 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEA_002507 a0034a08c9485d0df7710a1d6618ba97 433 PRINTS PR00148 Enolase signature 317 328 4.0E-44 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEA_002507 a0034a08c9485d0df7710a1d6618ba97 433 PRINTS PR00148 Enolase signature 165 178 4.0E-44 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEA_002507 a0034a08c9485d0df7710a1d6618ba97 433 PRINTS PR00148 Enolase signature 340 354 4.0E-44 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEA_002507 a0034a08c9485d0df7710a1d6618ba97 433 PRINTS PR00148 Enolase signature 37 51 4.0E-44 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEA_002507 a0034a08c9485d0df7710a1d6618ba97 433 PRINTS PR00148 Enolase signature 107 123 4.0E-44 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEA_002507 a0034a08c9485d0df7710a1d6618ba97 433 SUPERFAMILY SSF51604 143 428 4.39E-126 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VEA_002507 a0034a08c9485d0df7710a1d6618ba97 433 PIRSF PIRSF001400 1 431 9.0E-192 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VEA_002507 a0034a08c9485d0df7710a1d6618ba97 433 Gene3D G3DSA:3.20.20.120 128 433 4.0E-132 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VEA_002890 e46fbd101a906125eee491ab5ab7cfbf 232 PRINTS PR00783 Major intrinsic protein family signature 2 21 5.8E-51 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VEA_002890 e46fbd101a906125eee491ab5ab7cfbf 232 PRINTS PR00783 Major intrinsic protein family signature 42 66 5.8E-51 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VEA_002890 e46fbd101a906125eee491ab5ab7cfbf 232 PRINTS PR00783 Major intrinsic protein family signature 79 98 5.8E-51 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VEA_002890 e46fbd101a906125eee491ab5ab7cfbf 232 PRINTS PR00783 Major intrinsic protein family signature 205 225 5.8E-51 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VEA_002890 e46fbd101a906125eee491ab5ab7cfbf 232 PRINTS PR00783 Major intrinsic protein family signature 166 188 5.8E-51 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VEA_002890 e46fbd101a906125eee491ab5ab7cfbf 232 PRINTS PR00783 Major intrinsic protein family signature 136 154 5.8E-51 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VEA_002890 e46fbd101a906125eee491ab5ab7cfbf 232 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 222 2.5E-58 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VEA_002890 e46fbd101a906125eee491ab5ab7cfbf 232 Gene3D G3DSA:1.20.1080.10 1 229 7.2E-85 T 13-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VEA_002890 e46fbd101a906125eee491ab5ab7cfbf 232 ProSitePatterns PS00221 MIP family signature. 60 68 - T 13-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 VEA_002890 e46fbd101a906125eee491ab5ab7cfbf 232 SUPERFAMILY SSF81338 2 227 1.05E-67 T 13-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VEA_002890 e46fbd101a906125eee491ab5ab7cfbf 232 Pfam PF00230 Major intrinsic protein 2 222 7.4E-47 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VEA_002890 e46fbd101a906125eee491ab5ab7cfbf 232 Hamap MF_01146 Aquaporin Z [aqpZ]. 1 229 35.013 T 13-10-2018 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 VEA_002649 abf2320306e327ad0ad1d21e15a4812f 458 Pfam PF00437 Type II/IV secretion system protein 107 384 1.5E-84 T 13-10-2018 IPR001482 Type II/IV secretion system protein VEA_002649 abf2320306e327ad0ad1d21e15a4812f 458 Gene3D G3DSA:3.30.450.380 7 202 3.9E-45 T 13-10-2018 VEA_002649 abf2320306e327ad0ad1d21e15a4812f 458 Gene3D G3DSA:3.40.50.300 203 428 3.3E-72 T 13-10-2018 VEA_002649 abf2320306e327ad0ad1d21e15a4812f 458 SUPERFAMILY SSF52540 87 426 2.51E-67 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000211 447e15d47315a7f312626463b296bf44 293 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 246 288 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VEA_000211 447e15d47315a7f312626463b296bf44 293 Gene3D G3DSA:1.10.10.60 188 293 2.2E-27 T 13-10-2018 VEA_000211 447e15d47315a7f312626463b296bf44 293 SUPERFAMILY SSF46689 245 292 1.34E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_000211 447e15d47315a7f312626463b296bf44 293 SMART SM00342 209 292 1.5E-25 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_000211 447e15d47315a7f312626463b296bf44 293 Pfam PF06719 AraC-type transcriptional regulator N-terminus 27 180 1.8E-36 T 13-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal VEA_000211 447e15d47315a7f312626463b296bf44 293 Pfam PF12833 Helix-turn-helix domain 215 292 1.9E-20 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_000211 447e15d47315a7f312626463b296bf44 293 SUPERFAMILY SSF46689 193 243 4.69E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_003392 ee7cf66bd8a761cc8604494e99f49ea9 625 Gene3D G3DSA:3.30.300.30 497 624 9.1E-25 T 13-10-2018 VEA_003392 ee7cf66bd8a761cc8604494e99f49ea9 625 Gene3D G3DSA:3.40.50.12780 37 494 1.7E-102 T 13-10-2018 VEA_003392 ee7cf66bd8a761cc8604494e99f49ea9 625 SUPERFAMILY SSF56801 3 614 2.22E-153 T 13-10-2018 VEA_003392 ee7cf66bd8a761cc8604494e99f49ea9 625 Pfam PF13193 AMP-binding enzyme C-terminal domain 510 589 1.5E-25 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VEA_003392 ee7cf66bd8a761cc8604494e99f49ea9 625 Pfam PF00501 AMP-binding enzyme 65 501 7.5E-83 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VEA_003392 ee7cf66bd8a761cc8604494e99f49ea9 625 ProSitePatterns PS00455 Putative AMP-binding domain signature. 237 248 - T 13-10-2018 IPR020845 AMP-binding, conserved site VEA_003392 ee7cf66bd8a761cc8604494e99f49ea9 625 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 4 56 2.6E-12 T 13-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 VEA_003092 c7a28c28ce18b1a17b7cd00b4ff9b07f 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 37 50 2.1 T 13-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VEA_003092 c7a28c28ce18b1a17b7cd00b4ff9b07f 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 70 86 0.0053 T 13-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VEA_003092 c7a28c28ce18b1a17b7cd00b4ff9b07f 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 12 26 58.0 T 13-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VEA_003092 c7a28c28ce18b1a17b7cd00b4ff9b07f 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 99 113 0.023 T 13-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VEA_003092 c7a28c28ce18b1a17b7cd00b4ff9b07f 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 51 67 0.0049 T 13-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VEA_003092 c7a28c28ce18b1a17b7cd00b4ff9b07f 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 75 93 - T 13-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VEA_003092 c7a28c28ce18b1a17b7cd00b4ff9b07f 236 SUPERFAMILY SSF51120 10 206 1.36E-27 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VEA_003092 c7a28c28ce18b1a17b7cd00b4ff9b07f 236 Gene3D G3DSA:2.150.10.10 5 59 2.4E-6 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VEA_003092 c7a28c28ce18b1a17b7cd00b4ff9b07f 236 Gene3D G3DSA:2.150.10.10 60 100 1.3E-10 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VEA_003092 c7a28c28ce18b1a17b7cd00b4ff9b07f 236 Gene3D G3DSA:2.150.10.10 101 230 6.9E-9 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VEA_003092 c7a28c28ce18b1a17b7cd00b4ff9b07f 236 PRINTS PR00313 NodO calcium binding signature 88 96 1.2E-11 T 13-10-2018 VEA_003092 c7a28c28ce18b1a17b7cd00b4ff9b07f 236 PRINTS PR00313 NodO calcium binding signature 106 114 1.2E-11 T 13-10-2018 VEA_003092 c7a28c28ce18b1a17b7cd00b4ff9b07f 236 PRINTS PR00313 NodO calcium binding signature 124 133 1.2E-11 T 13-10-2018 VEA_003092 c7a28c28ce18b1a17b7cd00b4ff9b07f 236 PRINTS PR00313 NodO calcium binding signature 76 87 1.2E-11 T 13-10-2018 VEA_003407 5c838855f302ebe36eea335a4e3b429b 2042 Gene3D G3DSA:2.60.40.2030 427 533 4.9E-5 T 13-10-2018 IPR038081 CalX-like domain superfamily VEA_003407 5c838855f302ebe36eea335a4e3b429b 2042 Gene3D G3DSA:2.60.40.2030 938 1049 3.5E-5 T 13-10-2018 IPR038081 CalX-like domain superfamily VEA_003407 5c838855f302ebe36eea335a4e3b429b 2042 Gene3D G3DSA:2.60.40.2030 550 662 3.4E-5 T 13-10-2018 IPR038081 CalX-like domain superfamily VEA_003407 5c838855f302ebe36eea335a4e3b429b 2042 Gene3D G3DSA:2.60.40.2030 291 404 3.0E-5 T 13-10-2018 IPR038081 CalX-like domain superfamily VEA_003407 5c838855f302ebe36eea335a4e3b429b 2042 Gene3D G3DSA:2.60.40.2030 683 791 3.2E-5 T 13-10-2018 IPR038081 CalX-like domain superfamily VEA_003407 5c838855f302ebe36eea335a4e3b429b 2042 Gene3D G3DSA:2.60.40.2030 808 920 2.5E-5 T 13-10-2018 IPR038081 CalX-like domain superfamily VEA_003407 5c838855f302ebe36eea335a4e3b429b 2042 SUPERFAMILY SSF141072 683 809 1.44E-13 T 13-10-2018 IPR038081 CalX-like domain superfamily VEA_003407 5c838855f302ebe36eea335a4e3b429b 2042 SUPERFAMILY SSF141072 812 938 1.96E-12 T 13-10-2018 IPR038081 CalX-like domain superfamily VEA_003407 5c838855f302ebe36eea335a4e3b429b 2042 SUPERFAMILY SSF141072 553 680 6.8E-13 T 13-10-2018 IPR038081 CalX-like domain superfamily VEA_003407 5c838855f302ebe36eea335a4e3b429b 2042 SUPERFAMILY SSF141072 425 551 1.57E-11 T 13-10-2018 IPR038081 CalX-like domain superfamily VEA_003407 5c838855f302ebe36eea335a4e3b429b 2042 Gene3D G3DSA:2.60.40.2030 1193 1317 1.2E-7 T 13-10-2018 IPR038081 CalX-like domain superfamily VEA_003407 5c838855f302ebe36eea335a4e3b429b 2042 Gene3D G3DSA:2.60.40.2030 1058 1181 4.4E-6 T 13-10-2018 IPR038081 CalX-like domain superfamily VEA_003407 5c838855f302ebe36eea335a4e3b429b 2042 SUPERFAMILY SSF141072 1339 1447 4.84E-11 T 13-10-2018 IPR038081 CalX-like domain superfamily VEA_003407 5c838855f302ebe36eea335a4e3b429b 2042 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1924 1941 0.012 T 13-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VEA_003407 5c838855f302ebe36eea335a4e3b429b 2042 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1907 1923 0.027 T 13-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VEA_003407 5c838855f302ebe36eea335a4e3b429b 2042 SUPERFAMILY SSF141072 941 1068 1.01E-11 T 13-10-2018 IPR038081 CalX-like domain superfamily VEA_003407 5c838855f302ebe36eea335a4e3b429b 2042 SUPERFAMILY SSF141072 1195 1337 2.09E-15 T 13-10-2018 IPR038081 CalX-like domain superfamily VEA_003407 5c838855f302ebe36eea335a4e3b429b 2042 Gene3D G3DSA:2.150.10.10 1891 2037 1.1E-14 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VEA_003407 5c838855f302ebe36eea335a4e3b429b 2042 SUPERFAMILY SSF141072 1060 1203 8.76E-14 T 13-10-2018 IPR038081 CalX-like domain superfamily VEA_003407 5c838855f302ebe36eea335a4e3b429b 2042 SUPERFAMILY SSF141072 144 293 1.02E-9 T 13-10-2018 IPR038081 CalX-like domain superfamily VEA_003407 5c838855f302ebe36eea335a4e3b429b 2042 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1921 1939 - T 13-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VEA_003407 5c838855f302ebe36eea335a4e3b429b 2042 SUPERFAMILY SSF141072 296 422 6.02E-13 T 13-10-2018 IPR038081 CalX-like domain superfamily VEA_003407 5c838855f302ebe36eea335a4e3b429b 2042 SUPERFAMILY SSF51120 1887 1984 5.1E-13 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VEA_003407 5c838855f302ebe36eea335a4e3b429b 2042 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1912 1930 - T 13-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VEA_003407 5c838855f302ebe36eea335a4e3b429b 2042 SUPERFAMILY SSF141072 1464 1572 3.79E-11 T 13-10-2018 IPR038081 CalX-like domain superfamily VEA_003407 5c838855f302ebe36eea335a4e3b429b 2042 Pfam PF03160 Calx-beta domain 1056 1164 0.043 T 13-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VEA_003407 5c838855f302ebe36eea335a4e3b429b 2042 Pfam PF03160 Calx-beta domain 154 252 0.48 T 13-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VEA_003407 5c838855f302ebe36eea335a4e3b429b 2042 Pfam PF03160 Calx-beta domain 1190 1299 0.0052 T 13-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VEA_003407 5c838855f302ebe36eea335a4e3b429b 2042 Pfam PF03160 Calx-beta domain 1450 1553 0.043 T 13-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VEA_003407 5c838855f302ebe36eea335a4e3b429b 2042 Pfam PF03160 Calx-beta domain 670 771 0.018 T 13-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VEA_003407 5c838855f302ebe36eea335a4e3b429b 2042 Pfam PF03160 Calx-beta domain 541 642 0.068 T 13-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VEA_003407 5c838855f302ebe36eea335a4e3b429b 2042 Pfam PF03160 Calx-beta domain 927 1029 0.0092 T 13-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VEA_003407 5c838855f302ebe36eea335a4e3b429b 2042 Pfam PF03160 Calx-beta domain 799 900 0.046 T 13-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VEA_003407 5c838855f302ebe36eea335a4e3b429b 2042 Pfam PF03160 Calx-beta domain 1326 1428 0.0011 T 13-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VEA_003407 5c838855f302ebe36eea335a4e3b429b 2042 Pfam PF03160 Calx-beta domain 283 384 0.013 T 13-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VEA_003407 5c838855f302ebe36eea335a4e3b429b 2042 Pfam PF03160 Calx-beta domain 426 513 0.038 T 13-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VEA_002223 c55aab6236547e3eaf1b377a3443bb65 428 Pfam PF01554 MatE 223 384 2.3E-24 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEA_002223 c55aab6236547e3eaf1b377a3443bb65 428 Pfam PF01554 MatE 3 159 8.9E-25 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEA_002223 c55aab6236547e3eaf1b377a3443bb65 428 TIGRFAM TIGR00797 matE: MATE efflux family protein 3 391 4.6E-56 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEA_002223 c55aab6236547e3eaf1b377a3443bb65 428 PIRSF PIRSF006603 1 427 4.5E-125 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEA_000474 0672fa76886788cd57c4f22c2bd92d49 334 SMART SM00448 3 115 1.4E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_000474 0672fa76886788cd57c4f22c2bd92d49 334 Gene3D G3DSA:3.40.50.2300 3 126 1.2E-28 T 13-10-2018 VEA_000474 0672fa76886788cd57c4f22c2bd92d49 334 SUPERFAMILY SSF103039 140 329 5.36E-39 T 13-10-2018 IPR028976 CheC-like superfamily VEA_000474 0672fa76886788cd57c4f22c2bd92d49 334 Gene3D G3DSA:3.40.1550.10 139 328 3.6E-31 T 13-10-2018 IPR028976 CheC-like superfamily VEA_000474 0672fa76886788cd57c4f22c2bd92d49 334 SUPERFAMILY SSF52172 4 120 3.84E-28 T 13-10-2018 IPR011006 CheY-like superfamily VEA_000474 0672fa76886788cd57c4f22c2bd92d49 334 Pfam PF00072 Response regulator receiver domain 5 115 1.7E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_001595 4880861295c639b07179979425a05bca 309 SUPERFAMILY SSF55136 161 301 4.45E-16 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VEA_001595 4880861295c639b07179979425a05bca 309 SUPERFAMILY SSF55961 5 146 1.41E-15 T 13-10-2018 VEA_001595 4880861295c639b07179979425a05bca 309 Gene3D G3DSA:3.30.530.20 3 152 2.4E-16 T 13-10-2018 IPR023393 START-like domain superfamily VEA_001595 4880861295c639b07179979425a05bca 309 Gene3D G3DSA:3.20.80.10 155 307 7.3E-25 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VEA_001595 4880861295c639b07179979425a05bca 309 SMART SM00871 156 309 9.2E-7 T 13-10-2018 IPR010499 Bacterial transcription activator, effector binding VEA_001595 4880861295c639b07179979425a05bca 309 Pfam PF06445 GyrI-like small molecule binding domain 161 306 4.7E-16 T 13-10-2018 IPR029442 GyrI-like small molecule binding domain VEA_001595 4880861295c639b07179979425a05bca 309 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 5 147 1.7E-20 T 13-10-2018 IPR019587 Polyketide cyclase/dehydrase VEA_003470 6c6a18c42c5bb04a34c580304d61b37f 324 PIRSF PIRSF000006 1 322 1.8E-111 T 13-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III VEA_003470 6c6a18c42c5bb04a34c580304d61b37f 324 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 240 315 1.0E-10 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_003470 6c6a18c42c5bb04a34c580304d61b37f 324 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 154 227 1.1E-13 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_003470 6c6a18c42c5bb04a34c580304d61b37f 324 PRINTS PR00605 Class IC cytochrome C signature 293 315 5.1E-6 T 13-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VEA_003470 6c6a18c42c5bb04a34c580304d61b37f 324 PRINTS PR00605 Class IC cytochrome C signature 164 175 5.1E-6 T 13-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VEA_003470 6c6a18c42c5bb04a34c580304d61b37f 324 SUPERFAMILY SSF46626 239 320 1.34E-21 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEA_003470 6c6a18c42c5bb04a34c580304d61b37f 324 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 112 321 2.4E-60 T 13-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III VEA_003470 6c6a18c42c5bb04a34c580304d61b37f 324 Gene3D G3DSA:1.10.760.10 131 318 5.2E-74 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEA_003470 6c6a18c42c5bb04a34c580304d61b37f 324 SUPERFAMILY SSF46626 55 238 1.16E-30 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEA_003470 6c6a18c42c5bb04a34c580304d61b37f 324 Gene3D G3DSA:1.10.760.10 209 295 5.2E-74 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEA_003470 6c6a18c42c5bb04a34c580304d61b37f 324 Gene3D G3DSA:1.20.58.1490 1 94 1.3E-34 T 13-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily VEA_003470 6c6a18c42c5bb04a34c580304d61b37f 324 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 37 83 3.3E-23 T 13-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal VEA_000027 81e7fedc06b6cc0b5628a46359eb39e8 855 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 843 0.0 T 13-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 VEA_000027 81e7fedc06b6cc0b5628a46359eb39e8 855 Gene3D G3DSA:3.40.50.300 541 757 1.4E-63 T 13-10-2018 VEA_000027 81e7fedc06b6cc0b5628a46359eb39e8 855 Gene3D G3DSA:3.40.50.300 354 535 8.7E-42 T 13-10-2018 VEA_000027 81e7fedc06b6cc0b5628a46359eb39e8 855 Pfam PF07724 AAA domain (Cdc48 subfamily) 587 753 6.4E-38 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VEA_000027 81e7fedc06b6cc0b5628a46359eb39e8 855 Gene3D G3DSA:3.40.50.300 160 352 6.8E-63 T 13-10-2018 VEA_000027 81e7fedc06b6cc0b5628a46359eb39e8 855 SUPERFAMILY SSF52540 537 839 1.87E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000027 81e7fedc06b6cc0b5628a46359eb39e8 855 SMART SM00382 208 353 1.0E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_000027 81e7fedc06b6cc0b5628a46359eb39e8 855 SMART SM00382 588 746 9.0E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_000027 81e7fedc06b6cc0b5628a46359eb39e8 855 Gene3D G3DSA:1.10.1780.10 1 159 1.2E-31 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VEA_000027 81e7fedc06b6cc0b5628a46359eb39e8 855 Gene3D G3DSA:1.10.8.60 760 854 9.9E-10 T 13-10-2018 VEA_000027 81e7fedc06b6cc0b5628a46359eb39e8 855 SUPERFAMILY SSF81923 11 128 9.12E-14 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VEA_000027 81e7fedc06b6cc0b5628a46359eb39e8 855 SMART SM01086 760 852 1.3E-5 T 13-10-2018 IPR019489 Clp ATPase, C-terminal VEA_000027 81e7fedc06b6cc0b5628a46359eb39e8 855 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 213 326 6.1E-9 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VEA_000027 81e7fedc06b6cc0b5628a46359eb39e8 855 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 760 834 5.9E-10 T 13-10-2018 IPR019489 Clp ATPase, C-terminal VEA_000027 81e7fedc06b6cc0b5628a46359eb39e8 855 SUPERFAMILY SSF52540 169 495 3.7E-73 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000027 81e7fedc06b6cc0b5628a46359eb39e8 855 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 637 655 2.8E-31 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 VEA_000027 81e7fedc06b6cc0b5628a46359eb39e8 855 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 666 684 2.8E-31 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 VEA_000027 81e7fedc06b6cc0b5628a46359eb39e8 855 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 699 713 2.8E-31 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 VEA_000027 81e7fedc06b6cc0b5628a46359eb39e8 855 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 592 610 2.8E-31 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 VEA_000027 81e7fedc06b6cc0b5628a46359eb39e8 855 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 304 316 - T 13-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 VEA_001987 14e1ee19f33e585977f740713eba8eef 207 Pfam PF01205 Uncharacterized protein family UPF0029 20 127 1.1E-25 T 13-10-2018 IPR001498 Impact, N-terminal VEA_001987 14e1ee19f33e585977f740713eba8eef 207 Gene3D G3DSA:3.30.230.30 2 136 2.0E-49 T 13-10-2018 IPR036956 Impact, N-terminal domain superfamily VEA_001987 14e1ee19f33e585977f740713eba8eef 207 SUPERFAMILY SSF54211 5 134 7.59E-42 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEA_001987 14e1ee19f33e585977f740713eba8eef 207 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 5 200 9.9E-66 T 13-10-2018 IPR015796 Impact family, bacterial/archaeal VEA_001987 14e1ee19f33e585977f740713eba8eef 207 Pfam PF09186 Domain of unknown function (DUF1949) 143 196 1.7E-11 T 13-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal VEA_001987 14e1ee19f33e585977f740713eba8eef 207 SUPERFAMILY SSF54980 139 204 4.03E-9 T 13-10-2018 IPR035647 EF-G domain III/V-like VEA_001262 6a64af066cb9764aafbac204e3dbcec6 273 Gene3D G3DSA:3.40.190.10 99 233 1.4E-81 T 13-10-2018 VEA_001262 6a64af066cb9764aafbac204e3dbcec6 273 Gene3D G3DSA:3.40.190.10 30 270 1.4E-81 T 13-10-2018 VEA_001262 6a64af066cb9764aafbac204e3dbcec6 273 Pfam PF12849 PBP superfamily domain 23 258 2.3E-39 T 13-10-2018 IPR024370 PBP domain VEA_001262 6a64af066cb9764aafbac204e3dbcec6 273 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 20 271 6.9E-76 T 13-10-2018 IPR011862 Phosphate binding protein GO:0042301 VEA_001262 6a64af066cb9764aafbac204e3dbcec6 273 SUPERFAMILY SSF53850 16 273 3.72E-72 T 13-10-2018 VEA_004407 50a07afb0a14305750ecba809acc63f1 327 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 229 246 - T 13-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 VEA_004407 50a07afb0a14305750ecba809acc63f1 327 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 9 287 2.5E-85 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 VEA_004407 50a07afb0a14305750ecba809acc63f1 327 Gene3D G3DSA:3.20.20.300 1 327 5.2E-127 T 13-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 VEA_004407 50a07afb0a14305750ecba809acc63f1 327 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 327 45.194 T 13-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VEA_004407 50a07afb0a14305750ecba809acc63f1 327 SUPERFAMILY SSF51445 2 285 4.95E-86 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VEA_001397 6952f2ab9c5e786d813119d17e0e9b70 473 Gene3D G3DSA:1.20.1600.10 9 461 1.9E-37 T 13-10-2018 VEA_001397 6952f2ab9c5e786d813119d17e0e9b70 473 Pfam PF02321 Outer membrane efflux protein 277 455 3.6E-16 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VEA_001397 6952f2ab9c5e786d813119d17e0e9b70 473 SUPERFAMILY SSF56954 9 457 3.66E-47 T 13-10-2018 VEA_004150 cee0e31a4198a5194e2e9ee1e4947d97 305 ProSitePatterns PS01270 Band 7 protein family signature. 136 164 - T 13-10-2018 IPR018080 Band 7/stomatin-like, conserved site VEA_004150 cee0e31a4198a5194e2e9ee1e4947d97 305 SUPERFAMILY SSF117892 53 187 1.01E-40 T 13-10-2018 IPR036013 Band 7/SPFH domain superfamily VEA_004150 cee0e31a4198a5194e2e9ee1e4947d97 305 SMART SM00244 22 180 1.7E-58 T 13-10-2018 IPR001107 Band 7 domain VEA_004150 cee0e31a4198a5194e2e9ee1e4947d97 305 PRINTS PR00721 Stomatin signature 77 98 3.4E-28 T 13-10-2018 IPR001972 Stomatin family GO:0016020 VEA_004150 cee0e31a4198a5194e2e9ee1e4947d97 305 PRINTS PR00721 Stomatin signature 112 129 3.4E-28 T 13-10-2018 IPR001972 Stomatin family GO:0016020 VEA_004150 cee0e31a4198a5194e2e9ee1e4947d97 305 PRINTS PR00721 Stomatin signature 132 155 3.4E-28 T 13-10-2018 IPR001972 Stomatin family GO:0016020 VEA_004150 cee0e31a4198a5194e2e9ee1e4947d97 305 PRINTS PR00721 Stomatin signature 175 196 3.4E-28 T 13-10-2018 IPR001972 Stomatin family GO:0016020 VEA_004150 cee0e31a4198a5194e2e9ee1e4947d97 305 PRINTS PR00721 Stomatin signature 156 174 3.4E-28 T 13-10-2018 IPR001972 Stomatin family GO:0016020 VEA_004150 cee0e31a4198a5194e2e9ee1e4947d97 305 Pfam PF01145 SPFH domain / Band 7 family 26 195 2.9E-34 T 13-10-2018 IPR001107 Band 7 domain VEA_004150 cee0e31a4198a5194e2e9ee1e4947d97 305 Gene3D G3DSA:3.30.479.30 50 182 3.4E-42 T 13-10-2018 VEA_004150 cee0e31a4198a5194e2e9ee1e4947d97 305 Pfam PF16200 C-terminal region of band_7 242 303 3.9E-7 T 13-10-2018 IPR032435 Band 7, C-terminal extension Reactome: R-HSA-8949664 VEA_001727 81f2d5106b15edc7401908ba246dbe27 177 Gene3D G3DSA:3.90.930.12 1 82 6.7E-31 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001727 81f2d5106b15edc7401908ba246dbe27 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.8E-74 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VEA_001727 81f2d5106b15edc7401908ba246dbe27 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.5E-33 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VEA_001727 81f2d5106b15edc7401908ba246dbe27 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.5E-33 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VEA_001727 81f2d5106b15edc7401908ba246dbe27 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.5E-33 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VEA_001727 81f2d5106b15edc7401908ba246dbe27 177 SUPERFAMILY SSF56053 83 177 1.28E-35 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001727 81f2d5106b15edc7401908ba246dbe27 177 SUPERFAMILY SSF56053 1 82 5.23E-25 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001727 81f2d5106b15edc7401908ba246dbe27 177 PIRSF PIRSF002162 1 177 8.2E-45 T 13-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001727 81f2d5106b15edc7401908ba246dbe27 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.819 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VEA_001727 81f2d5106b15edc7401908ba246dbe27 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 13-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_001727 81f2d5106b15edc7401908ba246dbe27 177 Gene3D G3DSA:3.90.930.12 83 177 3.5E-39 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001727 81f2d5106b15edc7401908ba246dbe27 177 Pfam PF00347 Ribosomal protein L6 91 164 3.4E-19 T 13-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001727 81f2d5106b15edc7401908ba246dbe27 177 Pfam PF00347 Ribosomal protein L6 11 82 2.8E-20 T 13-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001443 9b404b7cf5bc01e89b408f86ce2fe439 140 Pfam PF00583 Acetyltransferase (GNAT) family 33 115 7.3E-11 T 13-10-2018 IPR000182 GNAT domain VEA_001443 9b404b7cf5bc01e89b408f86ce2fe439 140 SUPERFAMILY SSF55729 11 137 1.67E-22 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_001443 9b404b7cf5bc01e89b408f86ce2fe439 140 Gene3D G3DSA:3.40.630.30 35 138 2.5E-24 T 13-10-2018 VEA_004120 02fdee8ae858fd7a9a5227b73bc52088 548 Gene3D G3DSA:3.40.120.10 12 218 5.6E-75 T 13-10-2018 VEA_004120 02fdee8ae858fd7a9a5227b73bc52088 548 Gene3D G3DSA:3.40.120.10 221 318 4.3E-45 T 13-10-2018 VEA_004120 02fdee8ae858fd7a9a5227b73bc52088 548 SUPERFAMILY SSF53738 209 317 2.59E-8 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_004120 02fdee8ae858fd7a9a5227b73bc52088 548 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 13-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_004120 02fdee8ae858fd7a9a5227b73bc52088 548 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 8.7E-18 T 13-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_004120 02fdee8ae858fd7a9a5227b73bc52088 548 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 490 537 2.1E-8 T 13-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_004120 02fdee8ae858fd7a9a5227b73bc52088 548 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 543 0.0 T 13-10-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-6981|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7900|MetaCyc: PWY-7902 VEA_004120 02fdee8ae858fd7a9a5227b73bc52088 548 SUPERFAMILY SSF55957 433 543 2.79E-20 T 13-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_004120 02fdee8ae858fd7a9a5227b73bc52088 548 Gene3D G3DSA:3.30.310.50 443 546 3.9E-35 T 13-10-2018 VEA_004120 02fdee8ae858fd7a9a5227b73bc52088 548 SUPERFAMILY SSF53738 305 446 8.24E-31 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_004120 02fdee8ae858fd7a9a5227b73bc52088 548 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 438 2.3E-28 T 13-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_004120 02fdee8ae858fd7a9a5227b73bc52088 548 Gene3D G3DSA:3.40.120.10 319 442 1.2E-34 T 13-10-2018 VEA_004120 02fdee8ae858fd7a9a5227b73bc52088 548 SUPERFAMILY SSF53738 27 235 3.3E-52 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_004120 02fdee8ae858fd7a9a5227b73bc52088 548 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 179 2.9E-40 T 13-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_004509 c1bb7dda56fbf27c08d1723ccc41e6ca 196 Pfam PF00355 Rieske [2Fe-2S] domain 55 174 4.2E-11 T 13-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 VEA_004509 c1bb7dda56fbf27c08d1723ccc41e6ca 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 162 174 3.0E-7 T 13-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 VEA_004509 c1bb7dda56fbf27c08d1723ccc41e6ca 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 149 161 3.0E-7 T 13-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 VEA_004509 c1bb7dda56fbf27c08d1723ccc41e6ca 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 3.0E-7 T 13-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 VEA_004509 c1bb7dda56fbf27c08d1723ccc41e6ca 196 Gene3D G3DSA:2.102.10.10 43 190 8.3E-47 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VEA_004509 c1bb7dda56fbf27c08d1723ccc41e6ca 196 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 190 8.5E-74 T 13-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 VEA_004509 c1bb7dda56fbf27c08d1723ccc41e6ca 196 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 5 40 1.0E-13 T 13-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 VEA_004509 c1bb7dda56fbf27c08d1723ccc41e6ca 196 SUPERFAMILY SSF50022 30 189 1.51E-42 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VEA_001377 516c6404a162f5f55b769e2ade1a9035 97 Gene3D G3DSA:1.10.10.10 1 93 4.2E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001377 516c6404a162f5f55b769e2ade1a9035 97 Pfam PF12840 Helix-turn-helix domain 8 69 2.6E-12 T 13-10-2018 VEA_001377 516c6404a162f5f55b769e2ade1a9035 97 SUPERFAMILY SSF46785 1 93 4.71E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_001377 516c6404a162f5f55b769e2ade1a9035 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 6.3E-7 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEA_001377 516c6404a162f5f55b769e2ade1a9035 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 6.3E-7 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEA_001377 516c6404a162f5f55b769e2ade1a9035 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 6.3E-7 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEA_001377 516c6404a162f5f55b769e2ade1a9035 97 SMART SM00418 8 88 1.5E-5 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEA_004468 7c7ac058bf756b18ac0b060a06aa1055 1487 SUPERFAMILY SSF69336 1214 1465 4.32E-88 T 13-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 VEA_004468 7c7ac058bf756b18ac0b060a06aa1055 1487 Gene3D G3DSA:3.20.20.70 431 793 0.0 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_004468 7c7ac058bf756b18ac0b060a06aa1055 1487 Pfam PF01493 GXGXG motif 1236 1419 5.7E-74 T 13-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 VEA_004468 7c7ac058bf756b18ac0b060a06aa1055 1487 SUPERFAMILY SSF56235 13 429 6.18E-149 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VEA_004468 7c7ac058bf756b18ac0b060a06aa1055 1487 Gene3D G3DSA:3.60.20.10 13 546 0.0 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VEA_004468 7c7ac058bf756b18ac0b060a06aa1055 1487 Pfam PF04898 Glutamate synthase central domain 458 738 5.5E-103 T 13-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 VEA_004468 7c7ac058bf756b18ac0b060a06aa1055 1487 Pfam PF00310 Glutamine amidotransferases class-II 13 426 4.7E-177 T 13-10-2018 IPR017932 Glutamine amidotransferase type 2 domain VEA_004468 7c7ac058bf756b18ac0b060a06aa1055 1487 SUPERFAMILY SSF51395 434 1191 1.1E-251 T 13-10-2018 VEA_004468 7c7ac058bf756b18ac0b060a06aa1055 1487 Pfam PF01645 Conserved region in glutamate synthase 794 1157 3.0E-153 T 13-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 VEA_004468 7c7ac058bf756b18ac0b060a06aa1055 1487 Gene3D G3DSA:3.20.20.70 484 1172 0.0 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_004468 7c7ac058bf756b18ac0b060a06aa1055 1487 Gene3D G3DSA:2.160.20.60 1200 1468 1.7E-101 T 13-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 VEA_002942 f1e0908fe5ee12d12eb44dbbeb6e4872 129 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 1 127 6.6E-66 T 13-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 VEA_002942 f1e0908fe5ee12d12eb44dbbeb6e4872 129 SUPERFAMILY SSF54593 1 121 4.97E-34 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEA_002942 f1e0908fe5ee12d12eb44dbbeb6e4872 129 Gene3D G3DSA:3.10.180.10 1 127 1.6E-48 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEA_002942 f1e0908fe5ee12d12eb44dbbeb6e4872 129 ProSitePatterns PS00935 Glyoxalase I signature 2. 63 75 - T 13-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 VEA_002942 f1e0908fe5ee12d12eb44dbbeb6e4872 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 117 2.0E-22 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VEA_002929 2d3163f6eab579e1ff5e56967d3f64be 287 SUPERFAMILY SSF81324 28 239 1.07E-50 T 13-10-2018 VEA_002929 2d3163f6eab579e1ff5e56967d3f64be 287 PRINTS PR00169 Potassium channel signature 21 49 3.1E-35 T 13-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VEA_002929 2d3163f6eab579e1ff5e56967d3f64be 287 PRINTS PR00169 Potassium channel signature 212 238 3.1E-35 T 13-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VEA_002929 2d3163f6eab579e1ff5e56967d3f64be 287 PRINTS PR00169 Potassium channel signature 89 109 3.1E-35 T 13-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VEA_002929 2d3163f6eab579e1ff5e56967d3f64be 287 PRINTS PR00169 Potassium channel signature 125 151 3.1E-35 T 13-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VEA_002929 2d3163f6eab579e1ff5e56967d3f64be 287 PRINTS PR00169 Potassium channel signature 154 177 3.1E-35 T 13-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VEA_002929 2d3163f6eab579e1ff5e56967d3f64be 287 PRINTS PR00169 Potassium channel signature 183 205 3.1E-35 T 13-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VEA_002929 2d3163f6eab579e1ff5e56967d3f64be 287 PRINTS PR00169 Potassium channel signature 63 86 3.1E-35 T 13-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VEA_002929 2d3163f6eab579e1ff5e56967d3f64be 287 Pfam PF00520 Ion transport protein 29 239 2.9E-30 T 13-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 VEA_002929 2d3163f6eab579e1ff5e56967d3f64be 287 Gene3D G3DSA:1.20.120.350 9 137 1.7E-27 T 13-10-2018 IPR027359 Voltage-dependent channel domain superfamily VEA_002929 2d3163f6eab579e1ff5e56967d3f64be 287 Gene3D G3DSA:1.10.287.70 139 247 1.9E-27 T 13-10-2018 VEA_001469 86c17a8be6ce510a96210e5248cb1d2d 159 Gene3D G3DSA:1.20.1260.10 2 158 3.6E-54 T 13-10-2018 IPR012347 Ferritin-like VEA_001469 86c17a8be6ce510a96210e5248cb1d2d 159 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 135 153 5.3E-14 T 13-10-2018 IPR002177 DNA-binding protein Dps VEA_001469 86c17a8be6ce510a96210e5248cb1d2d 159 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 40 56 5.3E-14 T 13-10-2018 IPR002177 DNA-binding protein Dps VEA_001469 86c17a8be6ce510a96210e5248cb1d2d 159 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 64 80 5.3E-14 T 13-10-2018 IPR002177 DNA-binding protein Dps VEA_001469 86c17a8be6ce510a96210e5248cb1d2d 159 ProSitePatterns PS00819 Dps protein family signature 2. 66 80 - T 13-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 VEA_001469 86c17a8be6ce510a96210e5248cb1d2d 159 ProSitePatterns PS00818 Dps protein family signature 1. 40 56 - T 13-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 VEA_001469 86c17a8be6ce510a96210e5248cb1d2d 159 Pfam PF00210 Ferritin-like domain 20 158 6.3E-25 T 13-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 VEA_001469 86c17a8be6ce510a96210e5248cb1d2d 159 PIRSF PIRSF005900 1 159 1.1E-45 T 13-10-2018 IPR002177 DNA-binding protein Dps VEA_001469 86c17a8be6ce510a96210e5248cb1d2d 159 SUPERFAMILY SSF47240 4 158 4.93E-44 T 13-10-2018 IPR009078 Ferritin-like superfamily VEA_004208 87f80d3240bf802d7aea0100b6a6ec6c 196 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 18 31 - T 13-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 VEA_004208 87f80d3240bf802d7aea0100b6a6ec6c 196 Gene3D G3DSA:3.40.50.1470 1 196 2.6E-76 T 13-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 VEA_004208 87f80d3240bf802d7aea0100b6a6ec6c 196 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 5 184 35.648 T 13-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VEA_004208 87f80d3240bf802d7aea0100b6a6ec6c 196 Pfam PF01195 Peptidyl-tRNA hydrolase 7 190 2.2E-53 T 13-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VEA_004208 87f80d3240bf802d7aea0100b6a6ec6c 196 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 112 122 - T 13-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 VEA_004208 87f80d3240bf802d7aea0100b6a6ec6c 196 SUPERFAMILY SSF53178 5 194 2.22E-69 T 13-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 VEA_004208 87f80d3240bf802d7aea0100b6a6ec6c 196 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 191 2.3E-68 T 13-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VEA_000536 5bf9868a96a9ff1dc12daa68255d0c94 858 SUPERFAMILY SSF52172 733 853 9.96E-30 T 13-10-2018 IPR011006 CheY-like superfamily VEA_000536 5bf9868a96a9ff1dc12daa68255d0c94 858 Gene3D G3DSA:1.10.287.130 472 546 1.9E-22 T 13-10-2018 VEA_000536 5bf9868a96a9ff1dc12daa68255d0c94 858 Pfam PF00512 His Kinase A (phospho-acceptor) domain 482 546 2.7E-19 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_000536 5bf9868a96a9ff1dc12daa68255d0c94 858 SUPERFAMILY SSF103190 51 269 9.42E-69 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VEA_000536 5bf9868a96a9ff1dc12daa68255d0c94 858 SUPERFAMILY SSF55874 535 708 2.75E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_000536 5bf9868a96a9ff1dc12daa68255d0c94 858 SMART SM00448 734 846 5.9E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_000536 5bf9868a96a9ff1dc12daa68255d0c94 858 SUPERFAMILY SSF47384 469 547 3.53E-19 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEA_000536 5bf9868a96a9ff1dc12daa68255d0c94 858 Gene3D G3DSA:3.30.450.220 50 206 5.1E-63 T 13-10-2018 VEA_000536 5bf9868a96a9ff1dc12daa68255d0c94 858 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 593 708 5.2E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_000536 5bf9868a96a9ff1dc12daa68255d0c94 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 653 663 2.9E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_000536 5bf9868a96a9ff1dc12daa68255d0c94 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 670 688 2.9E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_000536 5bf9868a96a9ff1dc12daa68255d0c94 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 694 707 2.9E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_000536 5bf9868a96a9ff1dc12daa68255d0c94 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 635 649 2.9E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_000536 5bf9868a96a9ff1dc12daa68255d0c94 858 Gene3D G3DSA:3.40.50.2300 726 854 8.5E-32 T 13-10-2018 VEA_000536 5bf9868a96a9ff1dc12daa68255d0c94 858 SMART SM00388 481 546 4.3E-21 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_000536 5bf9868a96a9ff1dc12daa68255d0c94 858 Pfam PF00072 Response regulator receiver domain 736 845 3.8E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_000536 5bf9868a96a9ff1dc12daa68255d0c94 858 ProDom PD142495 MEMBRANE SENSOR TRANSFERASE LUXQ 2.7.3.- TRANSMEMBRANE INNER PHOSPHORYLATION SENSORY AUTOINDUCER 26 360 2.0E-180 T 13-10-2018 IPR015387 LuxQ, periplasmic GO:0004673|GO:0016791 VEA_000536 5bf9868a96a9ff1dc12daa68255d0c94 858 Pfam PF09308 LuxQ, periplasmic 40 277 1.3E-96 T 13-10-2018 IPR015387 LuxQ, periplasmic GO:0004673|GO:0016791 VEA_000536 5bf9868a96a9ff1dc12daa68255d0c94 858 Gene3D G3DSA:3.30.565.10 547 714 9.2E-47 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_000536 5bf9868a96a9ff1dc12daa68255d0c94 858 SMART SM00387 593 710 1.0E-37 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_000536 5bf9868a96a9ff1dc12daa68255d0c94 858 SUPERFAMILY SSF55785 347 459 1.44E-5 T 13-10-2018 IPR035965 PAS domain superfamily VEA_000536 5bf9868a96a9ff1dc12daa68255d0c94 858 Gene3D G3DSA:3.30.450.20 343 471 6.5E-11 T 13-10-2018 VEA_000536 5bf9868a96a9ff1dc12daa68255d0c94 858 Gene3D G3DSA:2.20.20.100 207 270 8.1E-35 T 13-10-2018 VEA_003467 c17d8d5bd59f433abce869fb759e5d19 475 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 9 466 3.1E-230 T 13-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 VEA_003467 c17d8d5bd59f433abce869fb759e5d19 475 SUPERFAMILY SSF81442 11 465 3.01E-121 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_003467 c17d8d5bd59f433abce869fb759e5d19 475 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 205 260 - T 13-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_003467 c17d8d5bd59f433abce869fb759e5d19 475 Gene3D G3DSA:1.20.210.10 4 471 6.1E-205 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_003467 c17d8d5bd59f433abce869fb759e5d19 475 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 15 445 2.9E-115 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_002643 331ee603f2bdcf96cab2d4aa343c731d 251 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 7 245 2.7E-73 T 13-10-2018 IPR017592 Pilus assembly, Flp-type CpaB VEA_002643 331ee603f2bdcf96cab2d4aa343c731d 251 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 113 216 3.1E-30 T 13-10-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain VEA_002643 331ee603f2bdcf96cab2d4aa343c731d 251 Pfam PF08666 SAF domain 45 105 9.2E-8 T 13-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 VEA_002643 331ee603f2bdcf96cab2d4aa343c731d 251 SMART SM00858 44 106 3.9E-7 T 13-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 VEA_004525 b3bea5a010774588e53b691447c7234b 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 254 281 3.4E-23 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEA_004525 b3bea5a010774588e53b691447c7234b 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 283 312 3.4E-23 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEA_004525 b3bea5a010774588e53b691447c7234b 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 68 88 3.4E-23 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEA_004525 b3bea5a010774588e53b691447c7234b 418 Gene3D G3DSA:1.10.287.950 89 418 3.4E-68 T 13-10-2018 VEA_004525 b3bea5a010774588e53b691447c7234b 418 SMART SM00283 156 417 2.1E-66 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_004525 b3bea5a010774588e53b691447c7234b 418 SUPERFAMILY SSF58104 109 418 4.84E-75 T 13-10-2018 VEA_004525 b3bea5a010774588e53b691447c7234b 418 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 204 384 1.2E-42 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_004426 1d3da473abc70e6da2d10d8f52a5296b 380 Pfam PF08014 Domain of unknown function (DUF1704) 42 378 5.8E-114 T 13-10-2018 IPR012548 Protein of unknown function DUF1704 VEA_004426 1d3da473abc70e6da2d10d8f52a5296b 380 TIGRFAM TIGR02421 QEGLA: conserved hypothetical protein 16 373 3.7E-132 T 13-10-2018 IPR012656 Conserved hypothetical protein CHP02421, QEGLA VEA_004426 1d3da473abc70e6da2d10d8f52a5296b 380 SMART SM01154 41 380 2.6E-158 T 13-10-2018 IPR012548 Protein of unknown function DUF1704 VEA_004446 10da735bac4463523a78eaad13c5dad2 258 Pfam PF03883 Peroxide stress protein YaaA 1 243 1.6E-95 T 13-10-2018 IPR005583 Peroxide stress protein YaaA VEA_004446 10da735bac4463523a78eaad13c5dad2 258 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 39.115 T 13-10-2018 IPR005583 Peroxide stress protein YaaA VEA_002874 db51e00db0ea2d6df01d4b0ccdeced9a 264 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 35.233 T 13-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEA_002874 db51e00db0ea2d6df01d4b0ccdeced9a 264 Pfam PF01416 tRNA pseudouridine synthase 8 102 3.0E-10 T 13-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEA_002874 db51e00db0ea2d6df01d4b0ccdeced9a 264 Pfam PF01416 tRNA pseudouridine synthase 144 244 3.5E-30 T 13-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEA_002874 db51e00db0ea2d6df01d4b0ccdeced9a 264 PIRSF PIRSF001430 1 252 5.3E-77 T 13-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEA_002874 db51e00db0ea2d6df01d4b0ccdeced9a 264 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 2.6E-74 T 13-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEA_002874 db51e00db0ea2d6df01d4b0ccdeced9a 264 Gene3D G3DSA:3.30.70.580 1 104 3.8E-40 T 13-10-2018 VEA_002874 db51e00db0ea2d6df01d4b0ccdeced9a 264 SUPERFAMILY SSF55120 1 256 7.48E-94 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEA_002874 db51e00db0ea2d6df01d4b0ccdeced9a 264 Gene3D G3DSA:3.30.70.660 105 242 1.7E-49 T 13-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 VEA_004055 4070bf4d75da8c548296bb419638c552 220 Pfam PF02254 TrkA-N domain 8 123 6.0E-28 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VEA_004055 4070bf4d75da8c548296bb419638c552 220 Gene3D G3DSA:3.30.70.1450 141 217 4.7E-15 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VEA_004055 4070bf4d75da8c548296bb419638c552 220 Gene3D G3DSA:3.40.50.720 2 140 6.2E-35 T 13-10-2018 VEA_004055 4070bf4d75da8c548296bb419638c552 220 Pfam PF02080 TrkA-C domain 154 214 5.8E-10 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VEA_004055 4070bf4d75da8c548296bb419638c552 220 SUPERFAMILY SSF51735 6 136 5.99E-35 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_004055 4070bf4d75da8c548296bb419638c552 220 SUPERFAMILY SSF116726 134 216 1.57E-15 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VEA_004296 d887892760eaa8f096968cdc7a507e90 554 Gene3D G3DSA:3.40.50.300 1 243 1.1E-29 T 13-10-2018 VEA_004296 d887892760eaa8f096968cdc7a507e90 554 SUPERFAMILY SSF52540 1 508 3.92E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_004296 d887892760eaa8f096968cdc7a507e90 554 PIRSF PIRSF003128 1 554 1.5E-163 T 13-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 VEA_004296 d887892760eaa8f096968cdc7a507e90 554 Gene3D G3DSA:3.40.50.300 247 553 6.1E-52 T 13-10-2018 VEA_004296 d887892760eaa8f096968cdc7a507e90 554 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 508 1.9E-17 T 13-10-2018 IPR003395 RecF/RecN/SMC, N-terminal VEA_004296 d887892760eaa8f096968cdc7a507e90 554 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 551 4.4E-172 T 13-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 VEA_002468 07859494a31aeb90e466afea1745f4de 664 SUPERFAMILY SSF52922 533 664 3.8E-45 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VEA_002468 07859494a31aeb90e466afea1745f4de 664 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 333 9.5E-167 T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VEA_002468 07859494a31aeb90e466afea1745f4de 664 Gene3D G3DSA:3.40.50.920 538 664 2.4E-46 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VEA_002468 07859494a31aeb90e466afea1745f4de 664 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 13-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VEA_002468 07859494a31aeb90e466afea1745f4de 664 Gene3D G3DSA:3.40.50.970 1 325 3.3E-131 T 13-10-2018 VEA_002468 07859494a31aeb90e466afea1745f4de 664 Pfam PF02780 Transketolase, C-terminal domain 543 655 1.4E-20 T 13-10-2018 IPR033248 Transketolase, C-terminal domain VEA_002468 07859494a31aeb90e466afea1745f4de 664 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 1.1E-46 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VEA_002468 07859494a31aeb90e466afea1745f4de 664 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 663 0.0 T 13-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 VEA_002468 07859494a31aeb90e466afea1745f4de 664 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VEA_002468 07859494a31aeb90e466afea1745f4de 664 SUPERFAMILY SSF52518 333 526 2.91E-67 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VEA_002468 07859494a31aeb90e466afea1745f4de 664 SUPERFAMILY SSF52518 6 329 4.95E-120 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VEA_002468 07859494a31aeb90e466afea1745f4de 664 Gene3D G3DSA:3.40.50.970 326 537 7.0E-84 T 13-10-2018 VEA_002468 07859494a31aeb90e466afea1745f4de 664 SMART SM00861 354 525 2.8E-64 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VEA_000068 2b926384a92379a1ad866813ab018d81 854 Pfam PF04324 BFD-like [2Fe-2S] binding domain 424 472 2.2E-14 T 13-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain VEA_000068 2b926384a92379a1ad866813ab018d81 854 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 561 622 1.5E-9 T 13-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEA_000068 2b926384a92379a1ad866813ab018d81 854 PRINTS PR00397 Sirohaem Fe-binding site signature 680 698 7.3E-6 T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEA_000068 2b926384a92379a1ad866813ab018d81 854 PRINTS PR00397 Sirohaem Fe-binding site signature 637 655 7.3E-6 T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEA_000068 2b926384a92379a1ad866813ab018d81 854 SUPERFAMILY SSF51905 145 310 1.11E-26 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_000068 2b926384a92379a1ad866813ab018d81 854 Gene3D G3DSA:3.50.50.60 7 283 2.5E-82 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_000068 2b926384a92379a1ad866813ab018d81 854 Gene3D G3DSA:3.50.50.60 110 246 2.5E-82 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_000068 2b926384a92379a1ad866813ab018d81 854 SUPERFAMILY SSF51905 3 184 6.28E-40 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_000068 2b926384a92379a1ad866813ab018d81 854 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 680 696 - T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEA_000068 2b926384a92379a1ad866813ab018d81 854 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 286 5.8E-53 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VEA_000068 2b926384a92379a1ad866813ab018d81 854 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 801 0.0 T 13-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 VEA_000068 2b926384a92379a1ad866813ab018d81 854 SUPERFAMILY SSF56014 634 809 1.7E-47 T 13-10-2018 VEA_000068 2b926384a92379a1ad866813ab018d81 854 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.3E-8 T 13-10-2018 VEA_000068 2b926384a92379a1ad866813ab018d81 854 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 2.3E-8 T 13-10-2018 VEA_000068 2b926384a92379a1ad866813ab018d81 854 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 2.3E-8 T 13-10-2018 VEA_000068 2b926384a92379a1ad866813ab018d81 854 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 2.3E-8 T 13-10-2018 VEA_000068 2b926384a92379a1ad866813ab018d81 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 1.7E-15 T 13-10-2018 VEA_000068 2b926384a92379a1ad866813ab018d81 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 1.7E-15 T 13-10-2018 VEA_000068 2b926384a92379a1ad866813ab018d81 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 1.7E-15 T 13-10-2018 VEA_000068 2b926384a92379a1ad866813ab018d81 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 1.7E-15 T 13-10-2018 VEA_000068 2b926384a92379a1ad866813ab018d81 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.7E-15 T 13-10-2018 VEA_000068 2b926384a92379a1ad866813ab018d81 854 SUPERFAMILY SSF55124 503 630 9.01E-31 T 13-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEA_000068 2b926384a92379a1ad866813ab018d81 854 PIRSF PIRSF037149 1 836 0.0 T 13-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 VEA_000068 2b926384a92379a1ad866813ab018d81 854 Gene3D G3DSA:1.10.10.1100 424 478 2.3E-12 T 13-10-2018 VEA_000068 2b926384a92379a1ad866813ab018d81 854 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 634 775 1.8E-15 T 13-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEA_000068 2b926384a92379a1ad866813ab018d81 854 Gene3D G3DSA:3.30.413.10 632 800 5.2E-32 T 13-10-2018 VEA_002973 1606c6b362e8e353f51e92c9f5e7b823 608 SMART SM00642 126 518 1.8E-88 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VEA_002973 1606c6b362e8e353f51e92c9f5e7b823 608 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 1 104 3.3E-7 T 13-10-2018 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 VEA_002973 1606c6b362e8e353f51e92c9f5e7b823 608 SUPERFAMILY SSF51445 113 527 2.9E-97 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VEA_002973 1606c6b362e8e353f51e92c9f5e7b823 608 SUPERFAMILY SSF81296 1 109 6.44E-21 T 13-10-2018 IPR014756 Immunoglobulin E-set VEA_002973 1606c6b362e8e353f51e92c9f5e7b823 608 Pfam PF00128 Alpha amylase, catalytic domain 175 491 8.7E-77 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VEA_002973 1606c6b362e8e353f51e92c9f5e7b823 608 Gene3D G3DSA:3.20.20.80 114 520 3.4E-137 T 13-10-2018 VEA_002973 1606c6b362e8e353f51e92c9f5e7b823 608 Gene3D G3DSA:2.60.40.1180 521 607 8.9E-15 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta VEA_002973 1606c6b362e8e353f51e92c9f5e7b823 608 PIRSF PIRSF036918 1 608 9.8E-262 T 13-10-2018 IPR017069 Maltodextrin glucosidase GO:0004558|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.20|KEGG: 00500+3.2.1.20|MetaCyc: PWY-842 VEA_002973 1606c6b362e8e353f51e92c9f5e7b823 608 SUPERFAMILY SSF51011 527 607 7.2E-14 T 13-10-2018 VEA_002973 1606c6b362e8e353f51e92c9f5e7b823 608 Gene3D G3DSA:2.60.40.10 6 112 1.8E-9 T 13-10-2018 IPR013783 Immunoglobulin-like fold VEA_002973 1606c6b362e8e353f51e92c9f5e7b823 608 Pfam PF16657 Maltogenic Amylase, C-terminal domain 527 602 2.1E-7 T 13-10-2018 IPR032091 Maltogenic Amylase, C-terminal VEA_000469 adc886d01937321e4ad4a4ad50ba2606 563 Pfam PF01565 FAD binding domain 90 221 4.6E-27 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 VEA_000469 adc886d01937321e4ad4a4ad50ba2606 563 Gene3D G3DSA:3.30.465.40 72 551 7.8E-75 T 13-10-2018 VEA_000469 adc886d01937321e4ad4a4ad50ba2606 563 SUPERFAMILY SSF56176 71 252 7.94E-45 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VEA_000469 adc886d01937321e4ad4a4ad50ba2606 563 Gene3D G3DSA:3.40.462.20 256 529 7.8E-75 T 13-10-2018 VEA_003500 ab66ad55c43f93c4b9b10f6666d56c73 277 Gene3D G3DSA:3.40.140.10 122 273 3.2E-42 T 13-10-2018 VEA_003500 ab66ad55c43f93c4b9b10f6666d56c73 277 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 11 267 25.942 T 13-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 VEA_003500 ab66ad55c43f93c4b9b10f6666d56c73 277 Gene3D G3DSA:3.10.20.10 36 118 1.0E-9 T 13-10-2018 VEA_003500 ab66ad55c43f93c4b9b10f6666d56c73 277 SUPERFAMILY SSF53927 15 266 2.05E-70 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VEA_003500 ab66ad55c43f93c4b9b10f6666d56c73 277 Pfam PF02634 FdhD/NarQ family 35 266 2.5E-73 T 13-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 VEA_003500 ab66ad55c43f93c4b9b10f6666d56c73 277 PIRSF PIRSF015626 2 271 1.1E-97 T 13-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 VEA_003533 8963a831165f3143a7075278cbe8b268 503 Gene3D G3DSA:1.10.10.60 447 490 5.1E-8 T 13-10-2018 VEA_003533 8963a831165f3143a7075278cbe8b268 503 SMART SM00448 1 110 1.1E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_003533 8963a831165f3143a7075278cbe8b268 503 Gene3D G3DSA:1.10.8.60 310 390 1.3E-25 T 13-10-2018 VEA_003533 8963a831165f3143a7075278cbe8b268 503 Gene3D G3DSA:3.40.50.2300 1 129 2.5E-29 T 13-10-2018 VEA_003533 8963a831165f3143a7075278cbe8b268 503 Pfam PF02954 Bacterial regulatory protein, Fis family 453 489 2.8E-8 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEA_003533 8963a831165f3143a7075278cbe8b268 503 SUPERFAMILY SSF46689 446 494 3.67E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_003533 8963a831165f3143a7075278cbe8b268 503 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 351 360 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VEA_003533 8963a831165f3143a7075278cbe8b268 503 SUPERFAMILY SSF52172 1 182 1.02E-35 T 13-10-2018 IPR011006 CheY-like superfamily VEA_003533 8963a831165f3143a7075278cbe8b268 503 SMART SM00382 158 300 2.9E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_003533 8963a831165f3143a7075278cbe8b268 503 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 224 239 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VEA_003533 8963a831165f3143a7075278cbe8b268 503 Pfam PF00072 Response regulator receiver domain 1 110 1.7E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_003533 8963a831165f3143a7075278cbe8b268 503 Gene3D G3DSA:3.40.50.300 130 309 6.0E-64 T 13-10-2018 VEA_003533 8963a831165f3143a7075278cbe8b268 503 SUPERFAMILY SSF52540 138 381 1.73E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003533 8963a831165f3143a7075278cbe8b268 503 Pfam PF00158 Sigma-54 interaction domain 139 304 2.0E-68 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VEA_002079 79281b3a2af9e91791d45dcc6e3fc865 313 Gene3D G3DSA:3.40.190.10 94 304 2.1E-59 T 13-10-2018 VEA_002079 79281b3a2af9e91791d45dcc6e3fc865 313 Pfam PF03466 LysR substrate binding domain 97 308 6.3E-30 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_002079 79281b3a2af9e91791d45dcc6e3fc865 313 Gene3D G3DSA:3.40.190.10 182 280 2.1E-59 T 13-10-2018 VEA_002079 79281b3a2af9e91791d45dcc6e3fc865 313 SUPERFAMILY SSF53850 92 306 8.84E-49 T 13-10-2018 VEA_002079 79281b3a2af9e91791d45dcc6e3fc865 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 2.6E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_002079 79281b3a2af9e91791d45dcc6e3fc865 313 Gene3D G3DSA:1.10.10.10 2 89 2.9E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_002079 79281b3a2af9e91791d45dcc6e3fc865 313 SUPERFAMILY SSF46785 7 86 1.59E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_002079 79281b3a2af9e91791d45dcc6e3fc865 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 8.5E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_002079 79281b3a2af9e91791d45dcc6e3fc865 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 8.5E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_002079 79281b3a2af9e91791d45dcc6e3fc865 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 8.5E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000314 4613827fa540c20e7aa2e9c959c06bcf 89 SUPERFAMILY SSF46894 7 85 4.25E-19 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEA_000314 4613827fa540c20e7aa2e9c959c06bcf 89 SMART SM00862 7 84 5.2E-13 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEA_000314 4613827fa540c20e7aa2e9c959c06bcf 89 Pfam PF00486 Transcriptional regulatory protein, C terminal 11 84 1.5E-18 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEA_000314 4613827fa540c20e7aa2e9c959c06bcf 89 Gene3D G3DSA:1.10.10.10 4 89 4.1E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000644 8eaf1d96fe0e1b84271c496b184c7406 289 Gene3D G3DSA:3.40.190.10 174 249 4.9E-8 T 13-10-2018 VEA_000644 8eaf1d96fe0e1b84271c496b184c7406 289 Gene3D G3DSA:3.40.190.10 80 169 9.9E-14 T 13-10-2018 VEA_000644 8eaf1d96fe0e1b84271c496b184c7406 289 Pfam PF03466 LysR substrate binding domain 88 283 1.6E-28 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_000644 8eaf1d96fe0e1b84271c496b184c7406 289 SUPERFAMILY SSF53850 89 284 4.95E-28 T 13-10-2018 VEA_000644 8eaf1d96fe0e1b84271c496b184c7406 289 Gene3D G3DSA:1.10.10.10 1 79 1.2E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000644 8eaf1d96fe0e1b84271c496b184c7406 289 SUPERFAMILY SSF46785 1 107 7.64E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000644 8eaf1d96fe0e1b84271c496b184c7406 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 6.3E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_001885 0b57539a7d027b7d70269a2f581765ad 336 Pfam PF03934 Type II secretion system (T2SS), protein K 30 317 9.5E-87 T 13-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 VEA_001885 0b57539a7d027b7d70269a2f581765ad 336 PIRSF PIRSF002786 1 328 8.5E-66 T 13-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 VEA_001885 0b57539a7d027b7d70269a2f581765ad 336 SUPERFAMILY SSF158544 215 282 7.06E-20 T 13-10-2018 IPR038072 GspK, central domain superfamily VEA_001885 0b57539a7d027b7d70269a2f581765ad 336 Gene3D G3DSA:3.30.1300.30 42 309 5.2E-90 T 13-10-2018 VEA_001885 0b57539a7d027b7d70269a2f581765ad 336 Gene3D G3DSA:1.10.40.60 99 215 5.2E-90 T 13-10-2018 IPR038072 GspK, central domain superfamily VEA_001885 0b57539a7d027b7d70269a2f581765ad 336 SUPERFAMILY SSF54523 36 325 7.69E-36 T 13-10-2018 VEA_001885 0b57539a7d027b7d70269a2f581765ad 336 Gene3D G3DSA:1.10.40.60 216 285 5.2E-90 T 13-10-2018 IPR038072 GspK, central domain superfamily VEA_001885 0b57539a7d027b7d70269a2f581765ad 336 SUPERFAMILY SSF158544 101 213 6.8E-31 T 13-10-2018 IPR038072 GspK, central domain superfamily VEA_000403 ea045c6effca5cd720d268cce955691e 650 Gene3D G3DSA:3.40.50.12780 330 471 1.9E-32 T 13-10-2018 VEA_000403 ea045c6effca5cd720d268cce955691e 650 ProSitePatterns PS00455 Putative AMP-binding domain signature. 196 207 - T 13-10-2018 IPR020845 AMP-binding, conserved site VEA_000403 ea045c6effca5cd720d268cce955691e 650 Gene3D G3DSA:3.40.50.12780 8 319 7.0E-38 T 13-10-2018 VEA_000403 ea045c6effca5cd720d268cce955691e 650 Pfam PF00501 AMP-binding enzyme 21 471 2.0E-75 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VEA_000403 ea045c6effca5cd720d268cce955691e 650 SUPERFAMILY SSF56801 12 606 1.44E-99 T 13-10-2018 VEA_001417 d89babbd12b61f4e20c13901a6917550 248 SMART SM00481 5 79 6.5E-9 T 13-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal VEA_001417 d89babbd12b61f4e20c13901a6917550 248 Gene3D G3DSA:3.20.20.140 3 247 4.0E-65 T 13-10-2018 VEA_001417 d89babbd12b61f4e20c13901a6917550 248 SUPERFAMILY SSF89550 4 244 1.01E-61 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 VEA_001417 d89babbd12b61f4e20c13901a6917550 248 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 2 245 52.736 T 13-10-2018 IPR023710 Probable phosphatase YcdX GO:0008270 VEA_000051 e27dcd184ff273aae4d0d8be624d341d 568 PIRSF PIRSF000101 1 566 3.0E-301 T 13-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 VEA_000051 e27dcd184ff273aae4d0d8be624d341d 568 Hamap MF_02092 Quinone-dependent D-lactate dehydrogenase [dld]. 4 564 55.179 T 13-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 VEA_000051 e27dcd184ff273aae4d0d8be624d341d 568 SUPERFAMILY SSF56176 4 268 4.74E-68 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VEA_000051 e27dcd184ff273aae4d0d8be624d341d 568 Gene3D G3DSA:3.30.70.610 368 430 5.0E-17 T 13-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 VEA_000051 e27dcd184ff273aae4d0d8be624d341d 568 Gene3D G3DSA:3.30.70.610 264 347 5.8E-17 T 13-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 VEA_000051 e27dcd184ff273aae4d0d8be624d341d 568 Gene3D G3DSA:3.30.43.10 1 96 7.0E-14 T 13-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 VEA_000051 e27dcd184ff273aae4d0d8be624d341d 568 Gene3D G3DSA:3.30.1370.20 431 515 1.2E-38 T 13-10-2018 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 VEA_000051 e27dcd184ff273aae4d0d8be624d341d 568 SUPERFAMILY SSF55103 271 561 5.01E-106 T 13-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 VEA_000051 e27dcd184ff273aae4d0d8be624d341d 568 Gene3D G3DSA:3.30.465.10 100 263 1.4E-72 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 VEA_000051 e27dcd184ff273aae4d0d8be624d341d 568 Pfam PF09330 D-lactate dehydrogenase, membrane binding 273 562 8.8E-136 T 13-10-2018 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 VEA_000051 e27dcd184ff273aae4d0d8be624d341d 568 Pfam PF01565 FAD binding domain 41 160 2.4E-9 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 VEA_003883 3cb3788209d9e8675d4e6648d415960c 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.8E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_003883 3cb3788209d9e8675d4e6648d415960c 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.8E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_003883 3cb3788209d9e8675d4e6648d415960c 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.8E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_003883 3cb3788209d9e8675d4e6648d415960c 324 Gene3D G3DSA:1.10.10.10 1 86 5.4E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_003883 3cb3788209d9e8675d4e6648d415960c 324 Pfam PF03466 LysR substrate binding domain 91 292 2.5E-39 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_003883 3cb3788209d9e8675d4e6648d415960c 324 Gene3D G3DSA:3.40.190.10 167 267 1.3E-98 T 13-10-2018 VEA_003883 3cb3788209d9e8675d4e6648d415960c 324 SUPERFAMILY SSF53850 91 322 8.39E-42 T 13-10-2018 VEA_003883 3cb3788209d9e8675d4e6648d415960c 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 1.9E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_003883 3cb3788209d9e8675d4e6648d415960c 324 SUPERFAMILY SSF46785 1 113 5.75E-14 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_003883 3cb3788209d9e8675d4e6648d415960c 324 Gene3D G3DSA:3.40.190.10 93 303 1.3E-98 T 13-10-2018 VEA_000701 c116d4e1f5c86ec880a9ff07898828d5 246 Pfam PF00455 DeoR C terminal sensor domain 72 226 2.4E-40 T 13-10-2018 IPR014036 DeoR C-terminal sensor domain VEA_000701 c116d4e1f5c86ec880a9ff07898828d5 246 Gene3D G3DSA:1.10.10.10 1 52 1.8E-6 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000701 c116d4e1f5c86ec880a9ff07898828d5 246 SMART SM00420 4 56 5.7E-20 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEA_000701 c116d4e1f5c86ec880a9ff07898828d5 246 Pfam PF08220 DeoR-like helix-turn-helix domain 4 59 9.6E-17 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEA_000701 c116d4e1f5c86ec880a9ff07898828d5 246 SUPERFAMILY SSF100950 70 227 2.83E-24 T 13-10-2018 IPR037171 NagB/RpiA transferase-like VEA_000701 c116d4e1f5c86ec880a9ff07898828d5 246 SMART SM01134 67 227 1.9E-45 T 13-10-2018 VEA_000701 c116d4e1f5c86ec880a9ff07898828d5 246 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 22 36 2.0E-6 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEA_000701 c116d4e1f5c86ec880a9ff07898828d5 246 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 36 54 2.0E-6 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEA_000701 c116d4e1f5c86ec880a9ff07898828d5 246 SUPERFAMILY SSF46785 2 59 3.16E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000701 c116d4e1f5c86ec880a9ff07898828d5 246 ProSitePatterns PS00894 DeoR-type HTH domain signature. 4 38 - T 13-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VEA_001721 756d9a7dbdd6c76983597e7873ac5986 37 Pfam PF00444 Ribosomal protein L36 1 37 9.4E-19 T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001721 756d9a7dbdd6c76983597e7873ac5986 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.137 T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001721 756d9a7dbdd6c76983597e7873ac5986 37 SUPERFAMILY SSF57840 1 37 1.02E-16 T 13-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001721 756d9a7dbdd6c76983597e7873ac5986 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 4.0E-23 T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001721 756d9a7dbdd6c76983597e7873ac5986 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001721 756d9a7dbdd6c76983597e7873ac5986 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 3.0E-9 T 13-10-2018 VEA_002629 b347383da3e0f40f304c91b6bb4859f2 258 Gene3D G3DSA:3.20.20.70 1 257 1.3E-101 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_002629 b347383da3e0f40f304c91b6bb4859f2 258 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 258 52.805 T 13-10-2018 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 VEA_002629 b347383da3e0f40f304c91b6bb4859f2 258 SMART SM01133 10 244 3.3E-79 T 13-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 VEA_002629 b347383da3e0f40f304c91b6bb4859f2 258 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 230 9.5E-81 T 13-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 VEA_002629 b347383da3e0f40f304c91b6bb4859f2 258 Pfam PF01791 DeoC/LacD family aldolase 11 239 3.9E-48 T 13-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 VEA_002629 b347383da3e0f40f304c91b6bb4859f2 258 PIRSF PIRSF001357 5 252 1.5E-77 T 13-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 VEA_002629 b347383da3e0f40f304c91b6bb4859f2 258 SUPERFAMILY SSF51569 6 245 6.38E-83 T 13-10-2018 VEA_001573 da6c5eed8f4f18d3470f562713ba9804 247 SUPERFAMILY SSF53850 1 246 6.67E-69 T 13-10-2018 VEA_001573 da6c5eed8f4f18d3470f562713ba9804 247 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 49 62 - T 13-10-2018 IPR018313 Solute-binding protein family 3, conserved site VEA_001573 da6c5eed8f4f18d3470f562713ba9804 247 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 245 2.0E-82 T 13-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 VEA_001573 da6c5eed8f4f18d3470f562713ba9804 247 Gene3D G3DSA:3.40.190.10 113 205 7.9E-76 T 13-10-2018 VEA_001573 da6c5eed8f4f18d3470f562713ba9804 247 SMART SM00079 26 247 0.0055 T 13-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 VEA_001573 da6c5eed8f4f18d3470f562713ba9804 247 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 247 1.6E-64 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEA_001573 da6c5eed8f4f18d3470f562713ba9804 247 Gene3D G3DSA:3.40.190.10 30 244 7.9E-76 T 13-10-2018 VEA_001573 da6c5eed8f4f18d3470f562713ba9804 247 SMART SM00062 26 247 2.4E-72 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEA_001744 7ac43f0a0df52bd197cb78a400fbeff7 73 PRINTS PR01249 Ribosomal protein L31 signature 32 47 5.4E-23 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_001744 7ac43f0a0df52bd197cb78a400fbeff7 73 PRINTS PR01249 Ribosomal protein L31 signature 47 65 5.4E-23 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_001744 7ac43f0a0df52bd197cb78a400fbeff7 73 PRINTS PR01249 Ribosomal protein L31 signature 2 19 5.4E-23 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_001744 7ac43f0a0df52bd197cb78a400fbeff7 73 SUPERFAMILY SSF143800 1 68 2.12E-27 T 13-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001744 7ac43f0a0df52bd197cb78a400fbeff7 73 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 8.7E-36 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_001744 7ac43f0a0df52bd197cb78a400fbeff7 73 Pfam PF01197 Ribosomal protein L31 1 66 1.9E-32 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_001744 7ac43f0a0df52bd197cb78a400fbeff7 73 Gene3D G3DSA:2.30.170.50 1 71 9.1E-34 T 13-10-2018 VEA_001744 7ac43f0a0df52bd197cb78a400fbeff7 73 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 32.691 T 13-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_001744 7ac43f0a0df52bd197cb78a400fbeff7 73 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_000903 52950343e5030daec611b07bc8b4c7b7 214 SUPERFAMILY SSF56925 23 214 1.2E-33 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VEA_000903 52950343e5030daec611b07bc8b4c7b7 214 Pfam PF03922 OmpW family 24 214 5.0E-73 T 13-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 VEA_000903 52950343e5030daec611b07bc8b4c7b7 214 Gene3D G3DSA:2.40.160.20 22 214 5.7E-83 T 13-10-2018 VEA_002399 455af2455e01ec49e1401d54d7fe52ad 91 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 13-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VEA_002399 455af2455e01ec49e1401d54d7fe52ad 91 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 41 56 - T 13-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VEA_002399 455af2455e01ec49e1401d54d7fe52ad 91 PRINTS PR00107 Phosphocarrier protein signature 55 72 6.2E-10 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like VEA_002399 455af2455e01ec49e1401d54d7fe52ad 91 PRINTS PR00107 Phosphocarrier protein signature 40 55 6.2E-10 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like VEA_002399 455af2455e01ec49e1401d54d7fe52ad 91 PRINTS PR00107 Phosphocarrier protein signature 14 30 6.2E-10 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like VEA_002399 455af2455e01ec49e1401d54d7fe52ad 91 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 3 84 1.1E-22 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like VEA_002399 455af2455e01ec49e1401d54d7fe52ad 91 SUPERFAMILY SSF55594 4 90 3.53E-25 T 13-10-2018 IPR035895 HPr-like superfamily VEA_002399 455af2455e01ec49e1401d54d7fe52ad 91 Gene3D G3DSA:3.30.1340.10 1 85 3.0E-27 T 13-10-2018 IPR035895 HPr-like superfamily VEA_002399 455af2455e01ec49e1401d54d7fe52ad 91 Pfam PF00381 PTS HPr component phosphorylation site 4 84 2.7E-24 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like VEA_001008 ff68b49f57cfcced8dcf3034ad0bb253 704 Pfam PF00664 ABC transporter transmembrane region 158 417 3.6E-21 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VEA_001008 ff68b49f57cfcced8dcf3034ad0bb253 704 Gene3D G3DSA:3.90.70.10 1 126 4.6E-38 T 13-10-2018 VEA_001008 ff68b49f57cfcced8dcf3034ad0bb253 704 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 3 698 1.6E-295 T 13-10-2018 IPR017750 ATPase, type I secretion system VEA_001008 ff68b49f57cfcced8dcf3034ad0bb253 704 Gene3D G3DSA:3.40.50.300 460 703 1.6E-75 T 13-10-2018 VEA_001008 ff68b49f57cfcced8dcf3034ad0bb253 704 SUPERFAMILY SSF90123 142 452 3.53E-50 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEA_001008 ff68b49f57cfcced8dcf3034ad0bb253 704 SMART SM00382 495 681 2.2E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_001008 ff68b49f57cfcced8dcf3034ad0bb253 704 Pfam PF00005 ABC transporter 487 635 7.1E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_001008 ff68b49f57cfcced8dcf3034ad0bb253 704 SUPERFAMILY SSF52540 459 693 8.72E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001008 ff68b49f57cfcced8dcf3034ad0bb253 704 Gene3D G3DSA:1.20.1560.10 141 454 1.3E-56 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEA_001008 ff68b49f57cfcced8dcf3034ad0bb253 704 Pfam PF03412 Peptidase C39 family 5 124 1.5E-4 T 13-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 VEA_001008 ff68b49f57cfcced8dcf3034ad0bb253 704 ProSitePatterns PS00211 ABC transporters family signature. 607 621 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_004519 eeb397fc2b9eb857621739da3dcf7379 268 Pfam PF00149 Calcineurin-like phosphoesterase 9 200 6.9E-15 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VEA_004519 eeb397fc2b9eb857621739da3dcf7379 268 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 8 254 42.218 T 13-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 VEA_004519 eeb397fc2b9eb857621739da3dcf7379 268 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 199 254 9.0E-23 T 13-10-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 VEA_004519 eeb397fc2b9eb857621739da3dcf7379 268 SUPERFAMILY SSF56300 6 244 6.28E-57 T 13-10-2018 VEA_004519 eeb397fc2b9eb857621739da3dcf7379 268 Gene3D G3DSA:3.60.21.10 1 259 5.0E-71 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like VEA_002217 30eb298c9565b8a2b81e0616eca2769a 202 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 163 170 - T 13-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VEA_002217 30eb298c9565b8a2b81e0616eca2769a 202 Gene3D G3DSA:1.10.287.990 20 83 2.1E-25 T 13-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VEA_002217 30eb298c9565b8a2b81e0616eca2769a 202 Gene3D G3DSA:2.40.500.20 84 201 3.4E-48 T 13-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VEA_002217 30eb298c9565b8a2b81e0616eca2769a 202 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 92 195 3.8E-40 T 13-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VEA_002217 30eb298c9565b8a2b81e0616eca2769a 202 PRINTS PR01703 Manganese superoxide dismutase signature 68 81 3.8E-21 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VEA_002217 30eb298c9565b8a2b81e0616eca2769a 202 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 3.8E-21 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VEA_002217 30eb298c9565b8a2b81e0616eca2769a 202 PRINTS PR01703 Manganese superoxide dismutase signature 161 173 3.8E-21 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VEA_002217 30eb298c9565b8a2b81e0616eca2769a 202 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 3.8E-21 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VEA_002217 30eb298c9565b8a2b81e0616eca2769a 202 PRINTS PR01703 Manganese superoxide dismutase signature 121 129 3.8E-21 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VEA_002217 30eb298c9565b8a2b81e0616eca2769a 202 PIRSF PIRSF000349 1 202 1.5E-80 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VEA_002217 30eb298c9565b8a2b81e0616eca2769a 202 SUPERFAMILY SSF54719 87 200 1.02E-43 T 13-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VEA_002217 30eb298c9565b8a2b81e0616eca2769a 202 SUPERFAMILY SSF46609 1 90 5.5E-30 T 13-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VEA_002217 30eb298c9565b8a2b81e0616eca2769a 202 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 85 1.3E-27 T 13-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VEA_001613 3efbcab7965ef557c75d81a2706d1c2e 538 SUPERFAMILY SSF47090 452 526 6.02E-12 T 13-10-2018 IPR036365 PGBD-like superfamily VEA_001613 3efbcab7965ef557c75d81a2706d1c2e 538 Gene3D G3DSA:3.90.70.10 340 456 4.8E-33 T 13-10-2018 VEA_001613 3efbcab7965ef557c75d81a2706d1c2e 538 Pfam PF13401 AAA domain 42 171 7.2E-22 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_001613 3efbcab7965ef557c75d81a2706d1c2e 538 SUPERFAMILY SSF52540 6 264 4.33E-34 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001613 3efbcab7965ef557c75d81a2706d1c2e 538 Pfam PF01471 Putative peptidoglycan binding domain 464 519 9.9E-7 T 13-10-2018 IPR002477 Peptidoglycan binding-like VEA_001613 3efbcab7965ef557c75d81a2706d1c2e 538 Gene3D G3DSA:1.10.101.10 457 524 1.5E-20 T 13-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 VEA_001613 3efbcab7965ef557c75d81a2706d1c2e 538 SMART SM00382 42 195 2.6E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_001613 3efbcab7965ef557c75d81a2706d1c2e 538 Gene3D G3DSA:3.40.50.300 25 184 2.5E-13 T 13-10-2018 VEA_000509 4af01f045b135975693af82313d8a676 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 162 189 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_000509 4af01f045b135975693af82313d8a676 210 SMART SM00421 145 202 1.5E-22 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_000509 4af01f045b135975693af82313d8a676 210 Gene3D G3DSA:3.40.50.12740 4 205 2.0E-65 T 13-10-2018 VEA_000509 4af01f045b135975693af82313d8a676 210 Pfam PF00072 Response regulator receiver domain 6 117 1.9E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_000509 4af01f045b135975693af82313d8a676 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 201 7.7E-22 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_000509 4af01f045b135975693af82313d8a676 210 SUPERFAMILY SSF52172 5 133 1.11E-33 T 13-10-2018 IPR011006 CheY-like superfamily VEA_000509 4af01f045b135975693af82313d8a676 210 SMART SM00448 4 117 2.9E-32 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_000509 4af01f045b135975693af82313d8a676 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 4.7E-14 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_000509 4af01f045b135975693af82313d8a676 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 4.7E-14 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_000509 4af01f045b135975693af82313d8a676 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 4.7E-14 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_000509 4af01f045b135975693af82313d8a676 210 SUPERFAMILY SSF46894 134 204 1.84E-20 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEA_001176 0ab14e3614753522d3dd841ecbb8640d 696 PIRSF PIRSF005419 1 696 2.9E-224 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VEA_001176 0ab14e3614753522d3dd841ecbb8640d 696 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 16 694 4.6E-237 T 13-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 VEA_001176 0ab14e3614753522d3dd841ecbb8640d 696 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 141 164 - T 13-10-2018 IPR025505 FHIPEP conserved site VEA_001176 0ab14e3614753522d3dd841ecbb8640d 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 155 173 6.2E-55 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VEA_001176 0ab14e3614753522d3dd841ecbb8640d 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 236 250 6.2E-55 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VEA_001176 0ab14e3614753522d3dd841ecbb8640d 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 136 152 6.2E-55 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VEA_001176 0ab14e3614753522d3dd841ecbb8640d 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 32 45 6.2E-55 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VEA_001176 0ab14e3614753522d3dd841ecbb8640d 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 185 202 6.2E-55 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VEA_001176 0ab14e3614753522d3dd841ecbb8640d 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 69 88 6.2E-55 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VEA_001176 0ab14e3614753522d3dd841ecbb8640d 696 Gene3D G3DSA:1.10.490.80 592 695 1.1E-9 T 13-10-2018 VEA_001176 0ab14e3614753522d3dd841ecbb8640d 696 Pfam PF00771 FHIPEP family 25 687 1.3E-242 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VEA_001176 0ab14e3614753522d3dd841ecbb8640d 696 Gene3D G3DSA:3.40.30.60 358 501 6.0E-45 T 13-10-2018 VEA_001176 0ab14e3614753522d3dd841ecbb8640d 696 Gene3D G3DSA:1.10.8.540 502 589 2.9E-13 T 13-10-2018 VEA_002486 3b8ac1e2f2e6db60eb6026a3926eecb9 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 63 1.0E-30 T 13-10-2018 IPR009491 Protein of unknown function DUF1107 VEA_002486 3b8ac1e2f2e6db60eb6026a3926eecb9 68 Gene3D G3DSA:3.30.1910.10 1 63 1.6E-29 T 13-10-2018 VEA_002486 3b8ac1e2f2e6db60eb6026a3926eecb9 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 4.9E-29 T 13-10-2018 IPR009491 Protein of unknown function DUF1107 VEA_000964 ba7680a463e31c13022250c844c3e3b2 408 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 5 407 23.801 T 13-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 VEA_000964 ba7680a463e31c13022250c844c3e3b2 408 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 11 406 1.6E-136 T 13-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 VEA_000964 ba7680a463e31c13022250c844c3e3b2 408 Pfam PF03616 Sodium/glutamate symporter 7 376 2.0E-151 T 13-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 VEA_002336 7d0bcaa22787222c35eb68e3fd704095 254 Pfam PF04338 Protein of unknown function, DUF481 39 254 3.4E-53 T 13-10-2018 IPR007433 Protein of unknown function DUF481 VEA_002336 7d0bcaa22787222c35eb68e3fd704095 254 SUPERFAMILY SSF56935 37 204 6.51E-5 T 13-10-2018 VEA_001812 cb4435098e211ce7f776d84aba26ad92 255 SUPERFAMILY SSF53448 3 143 4.78E-25 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEA_001812 cb4435098e211ce7f776d84aba26ad92 255 Pfam PF00535 Glycosyl transferase family 2 8 117 1.8E-18 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VEA_001812 cb4435098e211ce7f776d84aba26ad92 255 Gene3D G3DSA:3.90.550.10 2 125 3.0E-22 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEA_001820 b599e7839223f9d627e9532763988061 78 Pfam PF00830 Ribosomal L28 family 3 62 2.6E-26 T 13-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001820 b599e7839223f9d627e9532763988061 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.372 T 13-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_001820 b599e7839223f9d627e9532763988061 78 Gene3D G3DSA:2.30.170.40 2 78 4.9E-33 T 13-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001820 b599e7839223f9d627e9532763988061 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 8.7E-28 T 13-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_001820 b599e7839223f9d627e9532763988061 78 SUPERFAMILY SSF143800 2 76 4.91E-30 T 13-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001920 1501bb5124b208e2bc48408b462d1ebb 253 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 1 252 1.3E-71 T 13-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 VEA_001920 1501bb5124b208e2bc48408b462d1ebb 253 PIRSF PIRSF005902 1 253 5.2E-72 T 13-10-2018 IPR001130 TatD family GO:0016788 VEA_001920 1501bb5124b208e2bc48408b462d1ebb 253 Pfam PF01026 TatD related DNase 2 252 1.7E-65 T 13-10-2018 IPR001130 TatD family GO:0016788 VEA_001920 1501bb5124b208e2bc48408b462d1ebb 253 Gene3D G3DSA:3.20.20.140 1 253 5.5E-81 T 13-10-2018 VEA_001920 1501bb5124b208e2bc48408b462d1ebb 253 SUPERFAMILY SSF51556 1 253 8.43E-82 T 13-10-2018 IPR032466 Metal-dependent hydrolase VEA_000865 a0f698463783b617bb0aaede45426c81 266 Gene3D G3DSA:1.10.3720.10 64 260 3.0E-26 T 13-10-2018 IPR035906 MetI-like superfamily VEA_000865 a0f698463783b617bb0aaede45426c81 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 254 1.3E-31 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_000865 a0f698463783b617bb0aaede45426c81 266 SUPERFAMILY SSF161098 68 250 8.76E-33 T 13-10-2018 IPR035906 MetI-like superfamily VEA_002220 bdc278ce87a5fedbc2f9c098e6021e8d 170 Gene3D G3DSA:1.20.120.1490 37 154 2.9E-28 T 13-10-2018 VEA_002220 bdc278ce87a5fedbc2f9c098e6021e8d 170 Pfam PF07813 LTXXQ motif family protein 39 149 3.2E-24 T 13-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 VEA_002220 bdc278ce87a5fedbc2f9c098e6021e8d 170 PIRSF PIRSF034445 1 159 2.4E-22 T 13-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 VEA_000018 7dc4faa6c9136f1df536bb9f0b58edc8 264 SMART SM00331 11 237 9.4E-22 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VEA_000018 7dc4faa6c9136f1df536bb9f0b58edc8 264 Gene3D G3DSA:3.60.40.10 1 241 6.3E-59 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VEA_000018 7dc4faa6c9136f1df536bb9f0b58edc8 264 Pfam PF13672 Protein phosphatase 2C 19 211 3.3E-22 T 13-10-2018 VEA_000018 7dc4faa6c9136f1df536bb9f0b58edc8 264 SMART SM00332 1 235 1.4E-17 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VEA_000018 7dc4faa6c9136f1df536bb9f0b58edc8 264 SUPERFAMILY SSF81606 8 237 4.71E-61 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VEA_002716 800b5e41999af9aff2d1b8740fa16782 356 Gene3D G3DSA:3.30.1490.100 243 355 8.6E-26 T 13-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 VEA_002716 800b5e41999af9aff2d1b8740fa16782 356 Gene3D G3DSA:3.30.70.270 75 175 1.3E-38 T 13-10-2018 VEA_002716 800b5e41999af9aff2d1b8740fa16782 356 Gene3D G3DSA:1.10.150.20 176 234 2.2E-15 T 13-10-2018 VEA_002716 800b5e41999af9aff2d1b8740fa16782 356 Pfam PF11798 IMS family HHH motif 172 202 1.9E-5 T 13-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 VEA_002716 800b5e41999af9aff2d1b8740fa16782 356 Pfam PF00817 impB/mucB/samB family 13 160 2.1E-48 T 13-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 VEA_002716 800b5e41999af9aff2d1b8740fa16782 356 SUPERFAMILY SSF100879 247 355 1.81E-24 T 13-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 VEA_002716 800b5e41999af9aff2d1b8740fa16782 356 Pfam PF11799 impB/mucB/samB family C-terminal domain 243 343 9.3E-6 T 13-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 VEA_002716 800b5e41999af9aff2d1b8740fa16782 356 SUPERFAMILY SSF56672 4 240 3.02E-93 T 13-10-2018 VEA_002716 800b5e41999af9aff2d1b8740fa16782 356 Gene3D G3DSA:2.30.40.20 17 74 1.7E-26 T 13-10-2018 VEA_002716 800b5e41999af9aff2d1b8740fa16782 356 Hamap MF_01113 DNA polymerase IV [dinB]. 7 355 36.825 T 13-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 VEA_004104 d08e483d9abaa023769d29bfb1c3c6fc 47 Pfam PF04023 FeoA domain 3 46 8.8E-13 T 13-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 VEA_004104 d08e483d9abaa023769d29bfb1c3c6fc 47 SUPERFAMILY SSF50037 2 46 3.2E-14 T 13-10-2018 IPR008988 Transcriptional repressor, C-terminal VEA_004104 d08e483d9abaa023769d29bfb1c3c6fc 47 Gene3D G3DSA:2.30.30.90 1 47 1.2E-18 T 13-10-2018 IPR038157 Ferrous iron transporter, core domain VEA_002268 e7d95bdfe73c232be373db714eb1c79c 834 SUPERFAMILY SSF50249 227 650 2.97E-144 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_002268 e7d95bdfe73c232be373db714eb1c79c 834 Gene3D G3DSA:2.40.50.140 77 155 1.8E-11 T 13-10-2018 VEA_002268 e7d95bdfe73c232be373db714eb1c79c 834 SUPERFAMILY SSF50249 651 742 3.43E-22 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_002268 e7d95bdfe73c232be373db714eb1c79c 834 Pfam PF00773 RNB domain 267 594 1.3E-109 T 13-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 VEA_002268 e7d95bdfe73c232be373db714eb1c79c 834 SMART SM00316 650 733 1.0E-14 T 13-10-2018 IPR022967 RNA-binding domain, S1 VEA_002268 e7d95bdfe73c232be373db714eb1c79c 834 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 71 733 6.3E-257 T 13-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 VEA_002268 e7d95bdfe73c232be373db714eb1c79c 834 Hamap MF_01895 Ribonuclease R [rnr]. 42 733 59.403 T 13-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 VEA_002268 e7d95bdfe73c232be373db714eb1c79c 834 SUPERFAMILY SSF50249 71 154 1.8E-15 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_002268 e7d95bdfe73c232be373db714eb1c79c 834 SMART SM00955 267 595 4.1E-186 T 13-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 VEA_002268 e7d95bdfe73c232be373db714eb1c79c 834 SMART SM00357 90 152 6.0E-14 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 VEA_002268 e7d95bdfe73c232be373db714eb1c79c 834 Gene3D G3DSA:2.40.50.140 653 763 3.5E-27 T 13-10-2018 VEA_002268 e7d95bdfe73c232be373db714eb1c79c 834 Pfam PF00575 S1 RNA binding domain 650 731 2.9E-13 T 13-10-2018 IPR003029 S1 domain GO:0003676 VEA_002268 e7d95bdfe73c232be373db714eb1c79c 834 ProSitePatterns PS01175 Ribonuclease II family signature. 562 586 - T 13-10-2018 IPR022966 Ribonuclease II/R, conserved site VEA_002268 e7d95bdfe73c232be373db714eb1c79c 834 Pfam PF08461 Ribonuclease R winged-helix domain 27 88 2.0E-11 T 13-10-2018 IPR013668 Ribonuclease R winged-helix domain VEA_002268 e7d95bdfe73c232be373db714eb1c79c 834 SUPERFAMILY SSF50249 145 244 1.63E-16 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_002268 e7d95bdfe73c232be373db714eb1c79c 834 TIGRFAM TIGR02063 RNase_R: ribonuclease R 23 734 3.1E-276 T 13-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 VEA_002268 e7d95bdfe73c232be373db714eb1c79c 834 Pfam PF08206 Ribonuclease B OB domain 91 151 6.7E-22 T 13-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain VEA_001582 88855ef6ff6c6b06c0db73cd9bf78b86 321 Gene3D G3DSA:3.40.50.620 8 195 7.9E-50 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_001582 88855ef6ff6c6b06c0db73cd9bf78b86 321 PIRSF PIRSF000089 6 321 9.6E-108 T 13-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 VEA_001582 88855ef6ff6c6b06c0db73cd9bf78b86 321 Gene3D G3DSA:3.40.50.1220 196 321 2.3E-57 T 13-10-2018 VEA_001582 88855ef6ff6c6b06c0db73cd9bf78b86 321 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 202 284 2.8E-36 T 13-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 VEA_001582 88855ef6ff6c6b06c0db73cd9bf78b86 321 SUPERFAMILY SSF52402 8 193 2.79E-46 T 13-10-2018 VEA_001582 88855ef6ff6c6b06c0db73cd9bf78b86 321 SUPERFAMILY SSF52467 201 320 3.6E-48 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VEA_001582 88855ef6ff6c6b06c0db73cd9bf78b86 321 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 265 291 - T 13-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 VEA_001582 88855ef6ff6c6b06c0db73cd9bf78b86 321 Pfam PF01012 Electron transfer flavoprotein domain 8 173 6.2E-39 T 13-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 VEA_001582 88855ef6ff6c6b06c0db73cd9bf78b86 321 SMART SM00893 8 196 5.6E-43 T 13-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 VEA_001254 7e7df0515c7342fe58733d60e8f89b94 84 Gene3D G3DSA:1.20.5.190 28 83 5.5E-13 T 13-10-2018 VEA_001254 7e7df0515c7342fe58733d60e8f89b94 84 Pfam PF04728 Lipoprotein leucine-zipper 32 84 1.5E-24 T 13-10-2018 IPR006817 Lipoprotein leucine-zipper GO:0019867 VEA_001254 7e7df0515c7342fe58733d60e8f89b94 84 PIRSF PIRSF002855 1 84 1.2E-31 T 13-10-2018 IPR016367 Murein-lipoprotein VEA_001254 7e7df0515c7342fe58733d60e8f89b94 84 SUPERFAMILY SSF58042 29 83 2.22E-16 T 13-10-2018 VEA_002547 eb67851403c3421af6544e48ca33f923 295 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 42 127 4.7E-27 T 13-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 VEA_002547 eb67851403c3421af6544e48ca33f923 295 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 130 293 1.2E-58 T 13-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 VEA_002547 eb67851403c3421af6544e48ca33f923 295 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 26 294 6.0E-96 T 13-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 VEA_002547 eb67851403c3421af6544e48ca33f923 295 Gene3D G3DSA:3.20.20.70 138 284 6.1E-127 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_002547 eb67851403c3421af6544e48ca33f923 295 SUPERFAMILY SSF54675 15 128 7.06E-33 T 13-10-2018 VEA_002547 eb67851403c3421af6544e48ca33f923 295 PIRSF PIRSF006250 16 295 1.6E-102 T 13-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 VEA_002547 eb67851403c3421af6544e48ca33f923 295 SUPERFAMILY SSF51690 130 294 2.9E-60 T 13-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 VEA_002547 eb67851403c3421af6544e48ca33f923 295 Gene3D G3DSA:3.90.1170.20 21 293 6.1E-127 T 13-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 VEA_003035 92d06f105c16d1a219610667b8fd088e 607 Gene3D G3DSA:1.10.287.130 389 449 7.3E-18 T 13-10-2018 VEA_003035 92d06f105c16d1a219610667b8fd088e 607 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 58 291 2.3E-35 T 13-10-2018 VEA_003035 92d06f105c16d1a219610667b8fd088e 607 Gene3D G3DSA:3.40.190.10 56 132 1.3E-15 T 13-10-2018 VEA_003035 92d06f105c16d1a219610667b8fd088e 607 SMART SM00387 494 607 2.6E-12 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_003035 92d06f105c16d1a219610667b8fd088e 607 Gene3D G3DSA:3.30.565.10 453 607 1.2E-26 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_003035 92d06f105c16d1a219610667b8fd088e 607 SUPERFAMILY SSF53850 62 286 1.54E-16 T 13-10-2018 VEA_003035 92d06f105c16d1a219610667b8fd088e 607 SMART SM00388 383 452 2.1E-8 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_003035 92d06f105c16d1a219610667b8fd088e 607 Pfam PF00512 His Kinase A (phospho-acceptor) domain 389 448 4.0E-9 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_003035 92d06f105c16d1a219610667b8fd088e 607 SUPERFAMILY SSF47384 376 448 4.51E-9 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEA_003035 92d06f105c16d1a219610667b8fd088e 607 SUPERFAMILY SSF55874 441 605 7.6E-28 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_003035 92d06f105c16d1a219610667b8fd088e 607 Gene3D G3DSA:3.40.190.10 133 240 1.3E-15 T 13-10-2018 VEA_003035 92d06f105c16d1a219610667b8fd088e 607 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 555 7.1E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_003035 92d06f105c16d1a219610667b8fd088e 607 PRINTS PR00344 Bacterial sensor protein C-terminal signature 567 585 7.1E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_003035 92d06f105c16d1a219610667b8fd088e 607 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 495 605 1.1E-12 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_001633 a3818295a9926561900d1bf5a34e81fd 382 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 151 163 - T 13-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VEA_001633 a3818295a9926561900d1bf5a34e81fd 382 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 2 379 41.019 T 13-10-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VEA_001633 a3818295a9926561900d1bf5a34e81fd 382 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 3 124 1.6E-23 T 13-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 VEA_001633 a3818295a9926561900d1bf5a34e81fd 382 SUPERFAMILY SSF48179 205 382 3.23E-45 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VEA_001633 a3818295a9926561900d1bf5a34e81fd 382 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 151 374 1.8E-58 T 13-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 VEA_001633 a3818295a9926561900d1bf5a34e81fd 382 Gene3D G3DSA:1.10.1040.10 208 382 1.4E-64 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VEA_001633 a3818295a9926561900d1bf5a34e81fd 382 Gene3D G3DSA:3.40.50.720 2 206 4.2E-80 T 13-10-2018 VEA_001633 a3818295a9926561900d1bf5a34e81fd 382 PRINTS PR00084 Mannitol dehydrogenase signature 115 128 7.7E-18 T 13-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VEA_001633 a3818295a9926561900d1bf5a34e81fd 382 PRINTS PR00084 Mannitol dehydrogenase signature 151 164 7.7E-18 T 13-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VEA_001633 a3818295a9926561900d1bf5a34e81fd 382 PRINTS PR00084 Mannitol dehydrogenase signature 4 14 7.7E-18 T 13-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VEA_001633 a3818295a9926561900d1bf5a34e81fd 382 PRINTS PR00084 Mannitol dehydrogenase signature 171 186 7.7E-18 T 13-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VEA_001633 a3818295a9926561900d1bf5a34e81fd 382 SUPERFAMILY SSF51735 3 202 4.17E-42 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_002766 943aaa215ef47f45b21e24f488989328 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.0E-44 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VEA_002766 943aaa215ef47f45b21e24f488989328 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 13-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 VEA_002766 943aaa215ef47f45b21e24f488989328 112 PRINTS PR00340 P-II protein signature 52 75 3.9E-44 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VEA_002766 943aaa215ef47f45b21e24f488989328 112 PRINTS PR00340 P-II protein signature 83 103 3.9E-44 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VEA_002766 943aaa215ef47f45b21e24f488989328 112 PRINTS PR00340 P-II protein signature 23 41 3.9E-44 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VEA_002766 943aaa215ef47f45b21e24f488989328 112 PRINTS PR00340 P-II protein signature 2 17 3.9E-44 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VEA_002766 943aaa215ef47f45b21e24f488989328 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 13-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 VEA_002766 943aaa215ef47f45b21e24f488989328 112 PIRSF PIRSF039144 1 112 2.6E-58 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VEA_002766 943aaa215ef47f45b21e24f488989328 112 SUPERFAMILY SSF54913 1 112 1.94E-47 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta VEA_002766 943aaa215ef47f45b21e24f488989328 112 SMART SM00938 4 105 7.9E-70 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VEA_002766 943aaa215ef47f45b21e24f488989328 112 Gene3D G3DSA:3.30.70.120 1 112 9.2E-49 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VEA_000155 a89aa34f666d72a6a06ec1c89d36b2cd 189 Gene3D G3DSA:3.30.70.1070 89 180 2.1E-21 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VEA_000155 a89aa34f666d72a6a06ec1c89d36b2cd 189 SUPERFAMILY SSF110997 99 162 5.89E-8 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VEA_000155 a89aa34f666d72a6a06ec1c89d36b2cd 189 Pfam PF05036 Sporulation related domain 99 171 1.5E-13 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 VEA_004482 b57884f118278039c009dd2173fb6560 132 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VEA_004482 b57884f118278039c009dd2173fb6560 132 Gene3D G3DSA:3.90.79.10 1 132 3.2E-40 T 13-10-2018 VEA_004482 b57884f118278039c009dd2173fb6560 132 PRINTS PR00502 NUDIX hydrolase family signature 48 63 3.9E-9 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VEA_004482 b57884f118278039c009dd2173fb6560 132 PRINTS PR00502 NUDIX hydrolase family signature 34 48 3.9E-9 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VEA_004482 b57884f118278039c009dd2173fb6560 132 SUPERFAMILY SSF55811 1 127 1.9E-34 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VEA_004482 b57884f118278039c009dd2173fb6560 132 Pfam PF00293 NUDIX domain 7 125 1.8E-19 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VEA_004482 b57884f118278039c009dd2173fb6560 132 TIGRFAM TIGR00586 mutt: mutator mutT protein 1 127 4.4E-41 T 13-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 VEA_003502 37e0c9bd09a7765dae970f42ccbc4aae 659 SUPERFAMILY SSF47384 422 492 1.04E-11 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEA_003502 37e0c9bd09a7765dae970f42ccbc4aae 659 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 542 647 8.3E-18 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_003502 37e0c9bd09a7765dae970f42ccbc4aae 659 Pfam PF00512 His Kinase A (phospho-acceptor) domain 428 493 2.0E-13 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_003502 37e0c9bd09a7765dae970f42ccbc4aae 659 Gene3D G3DSA:1.10.287.130 420 493 2.1E-21 T 13-10-2018 VEA_003502 37e0c9bd09a7765dae970f42ccbc4aae 659 PRINTS PR00344 Bacterial sensor protein C-terminal signature 609 627 4.8E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_003502 37e0c9bd09a7765dae970f42ccbc4aae 659 PRINTS PR00344 Bacterial sensor protein C-terminal signature 580 594 4.8E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_003502 37e0c9bd09a7765dae970f42ccbc4aae 659 PRINTS PR00344 Bacterial sensor protein C-terminal signature 598 608 4.8E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_003502 37e0c9bd09a7765dae970f42ccbc4aae 659 PRINTS PR00344 Bacterial sensor protein C-terminal signature 633 646 4.8E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_003502 37e0c9bd09a7765dae970f42ccbc4aae 659 SUPERFAMILY SSF103190 159 290 9.16E-13 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VEA_003502 37e0c9bd09a7765dae970f42ccbc4aae 659 Pfam PF00672 HAMP domain 329 375 1.5E-6 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_003502 37e0c9bd09a7765dae970f42ccbc4aae 659 SMART SM00388 428 495 2.1E-8 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_003502 37e0c9bd09a7765dae970f42ccbc4aae 659 Pfam PF17202 Single cache domain 3 184 298 4.7E-28 T 13-10-2018 IPR033463 Single cache domain 3 VEA_003502 37e0c9bd09a7765dae970f42ccbc4aae 659 Gene3D G3DSA:3.30.565.10 500 652 2.1E-37 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_003502 37e0c9bd09a7765dae970f42ccbc4aae 659 SUPERFAMILY SSF55874 485 647 6.68E-35 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_003502 37e0c9bd09a7765dae970f42ccbc4aae 659 SMART SM00387 538 649 8.1E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_003001 a13a51d7c9dc463565e1d71ed3efe5b2 209 Hamap MF_00165 Thymidylate kinase [tmk]. 4 206 27.309 T 13-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 VEA_003001 a13a51d7c9dc463565e1d71ed3efe5b2 209 ProSitePatterns PS01331 Thymidylate kinase signature. 95 107 - T 13-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 VEA_003001 a13a51d7c9dc463565e1d71ed3efe5b2 209 Pfam PF02223 Thymidylate kinase 8 198 3.3E-57 T 13-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 VEA_003001 a13a51d7c9dc463565e1d71ed3efe5b2 209 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 198 1.0E-60 T 13-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 VEA_003001 a13a51d7c9dc463565e1d71ed3efe5b2 209 Gene3D G3DSA:3.40.50.300 3 208 7.2E-61 T 13-10-2018 VEA_003001 a13a51d7c9dc463565e1d71ed3efe5b2 209 SUPERFAMILY SSF52540 1 207 1.29E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000705 bf6efcc3c8c4d832d2a7f9698573700e 466 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 374 457 4.4E-33 T 13-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 VEA_000705 bf6efcc3c8c4d832d2a7f9698573700e 466 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 375 465 4.6E-17 T 13-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VEA_000705 bf6efcc3c8c4d832d2a7f9698573700e 466 Gene3D G3DSA:3.40.50.2300 366 466 1.1E-34 T 13-10-2018 VEA_000705 bf6efcc3c8c4d832d2a7f9698573700e 466 SUPERFAMILY SSF52794 372 465 3.66E-29 T 13-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VEA_000705 bf6efcc3c8c4d832d2a7f9698573700e 466 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 13 341 1.0E-75 T 13-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 VEA_001625 0198a1047bda8799194301c4f16057c1 267 SUPERFAMILY SSF53850 31 267 1.01E-80 T 13-10-2018 VEA_001625 0198a1047bda8799194301c4f16057c1 267 Gene3D G3DSA:3.40.190.10 32 262 1.2E-90 T 13-10-2018 VEA_001625 0198a1047bda8799194301c4f16057c1 267 Pfam PF03180 NLPA lipoprotein 31 264 7.4E-85 T 13-10-2018 IPR004872 Lipoprotein NlpA family VEA_001625 0198a1047bda8799194301c4f16057c1 267 Gene3D G3DSA:3.40.190.10 112 217 1.2E-90 T 13-10-2018 VEA_001625 0198a1047bda8799194301c4f16057c1 267 PIRSF PIRSF002854 1 267 7.4E-88 T 13-10-2018 IPR004872 Lipoprotein NlpA family VEA_001822 6edffdeeafed056e5bd84a26b54df640 557 SMART SM00283 295 556 2.6E-58 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_001822 6edffdeeafed056e5bd84a26b54df640 557 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 367 523 3.0E-38 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_001822 6edffdeeafed056e5bd84a26b54df640 557 SUPERFAMILY SSF58104 248 557 1.96E-72 T 13-10-2018 VEA_001822 6edffdeeafed056e5bd84a26b54df640 557 SMART SM00304 226 280 7.1E-9 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_001822 6edffdeeafed056e5bd84a26b54df640 557 Pfam PF00672 HAMP domain 229 276 1.5E-9 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_001822 6edffdeeafed056e5bd84a26b54df640 557 SMART SM01049 44 133 4.1E-31 T 13-10-2018 IPR033480 Single Cache domain 2 VEA_001822 6edffdeeafed056e5bd84a26b54df640 557 Gene3D G3DSA:1.10.287.950 226 557 5.7E-69 T 13-10-2018 VEA_001822 6edffdeeafed056e5bd84a26b54df640 557 Pfam PF17200 Single Cache domain 2 47 189 2.5E-37 T 13-10-2018 IPR033480 Single Cache domain 2 VEA_001822 6edffdeeafed056e5bd84a26b54df640 557 Gene3D G3DSA:3.30.450.20 38 183 1.8E-54 T 13-10-2018 VEA_000550 374efe50b59f11d421ac40abf459171e 204 Pfam PF01810 LysE type translocator 15 202 5.1E-32 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEA_000550 374efe50b59f11d421ac40abf459171e 204 PIRSF PIRSF006324 1 204 1.7E-41 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEA_004132 f353e38eaa96c5043877e43895c36a15 554 Gene3D G3DSA:3.40.50.620 194 514 2.9E-112 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_004132 f353e38eaa96c5043877e43895c36a15 554 PIRSF PIRSF001589 363 506 1.8E-27 T 13-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 VEA_004132 f353e38eaa96c5043877e43895c36a15 554 PIRSF PIRSF001589 1 377 2.6E-105 T 13-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 VEA_004132 f353e38eaa96c5043877e43895c36a15 554 Gene3D G3DSA:3.60.20.10 2 193 4.0E-70 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VEA_004132 f353e38eaa96c5043877e43895c36a15 554 Pfam PF00733 Asparagine synthase 211 366 6.0E-56 T 13-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 VEA_004132 f353e38eaa96c5043877e43895c36a15 554 SUPERFAMILY SSF52402 208 482 2.4E-74 T 13-10-2018 VEA_004132 f353e38eaa96c5043877e43895c36a15 554 SUPERFAMILY SSF56235 1 196 3.17E-57 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VEA_004132 f353e38eaa96c5043877e43895c36a15 554 Pfam PF13537 Glutamine amidotransferase domain 48 165 3.0E-40 T 13-10-2018 IPR017932 Glutamine amidotransferase type 2 domain VEA_004132 f353e38eaa96c5043877e43895c36a15 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 374 4.1E-116 T 13-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 VEA_001677 bc59dc8177efb97031f37a679e383984 158 Pfam PF01316 Arginine repressor, DNA binding domain 8 76 8.9E-24 T 13-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 VEA_001677 bc59dc8177efb97031f37a679e383984 158 Hamap MF_00173 Arginine repressor [argR]. 1 157 58.778 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VEA_001677 bc59dc8177efb97031f37a679e383984 158 TIGRFAM TIGR01529 argR_whole: arginine repressor 12 153 1.1E-43 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VEA_001677 bc59dc8177efb97031f37a679e383984 158 Gene3D G3DSA:3.30.1360.40 77 158 2.6E-34 T 13-10-2018 VEA_001677 bc59dc8177efb97031f37a679e383984 158 PRINTS PR01467 Bacterial arginine repressor signature 92 105 1.8E-24 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VEA_001677 bc59dc8177efb97031f37a679e383984 158 PRINTS PR01467 Bacterial arginine repressor signature 27 40 1.8E-24 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VEA_001677 bc59dc8177efb97031f37a679e383984 158 PRINTS PR01467 Bacterial arginine repressor signature 123 138 1.8E-24 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VEA_001677 bc59dc8177efb97031f37a679e383984 158 PRINTS PR01467 Bacterial arginine repressor signature 44 59 1.8E-24 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VEA_001677 bc59dc8177efb97031f37a679e383984 158 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 91 148 2.0E-20 T 13-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 VEA_001677 bc59dc8177efb97031f37a679e383984 158 Pfam PF02863 Arginine repressor, C-terminal domain 84 149 1.7E-21 T 13-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 VEA_001677 bc59dc8177efb97031f37a679e383984 158 Gene3D G3DSA:1.10.10.10 3 76 8.1E-35 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001677 bc59dc8177efb97031f37a679e383984 158 SUPERFAMILY SSF46785 5 79 3.45E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_001677 bc59dc8177efb97031f37a679e383984 158 SUPERFAMILY SSF55252 84 153 3.4E-19 T 13-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 VEA_001304 36234af4f9f88ed4d8dbff0d59ca0fa3 410 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 145 153 - T 13-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEA_001304 36234af4f9f88ed4d8dbff0d59ca0fa3 410 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 276 301 - T 13-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEA_001304 36234af4f9f88ed4d8dbff0d59ca0fa3 410 Gene3D G3DSA:2.60.120.10 322 403 1.9E-129 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VEA_001304 36234af4f9f88ed4d8dbff0d59ca0fa3 410 PIRSF PIRSF001480 18 410 1.6E-101 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEA_001304 36234af4f9f88ed4d8dbff0d59ca0fa3 410 PRINTS PR00714 Phosphomannose isomerase type I signature 24 42 2.2E-69 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEA_001304 36234af4f9f88ed4d8dbff0d59ca0fa3 410 PRINTS PR00714 Phosphomannose isomerase type I signature 276 295 2.2E-69 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEA_001304 36234af4f9f88ed4d8dbff0d59ca0fa3 410 PRINTS PR00714 Phosphomannose isomerase type I signature 52 67 2.2E-69 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEA_001304 36234af4f9f88ed4d8dbff0d59ca0fa3 410 PRINTS PR00714 Phosphomannose isomerase type I signature 145 168 2.2E-69 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEA_001304 36234af4f9f88ed4d8dbff0d59ca0fa3 410 PRINTS PR00714 Phosphomannose isomerase type I signature 100 121 2.2E-69 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEA_001304 36234af4f9f88ed4d8dbff0d59ca0fa3 410 PRINTS PR00714 Phosphomannose isomerase type I signature 241 256 2.2E-69 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEA_001304 36234af4f9f88ed4d8dbff0d59ca0fa3 410 PRINTS PR00714 Phosphomannose isomerase type I signature 295 314 2.2E-69 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEA_001304 36234af4f9f88ed4d8dbff0d59ca0fa3 410 PRINTS PR00714 Phosphomannose isomerase type I signature 257 276 2.2E-69 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEA_001304 36234af4f9f88ed4d8dbff0d59ca0fa3 410 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 21 402 1.7E-88 T 13-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEA_001304 36234af4f9f88ed4d8dbff0d59ca0fa3 410 Gene3D G3DSA:1.10.441.10 169 321 1.9E-129 T 13-10-2018 VEA_001304 36234af4f9f88ed4d8dbff0d59ca0fa3 410 Pfam PF01238 Phosphomannose isomerase type I 23 378 1.1E-87 T 13-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEA_001304 36234af4f9f88ed4d8dbff0d59ca0fa3 410 Gene3D G3DSA:2.60.120.10 26 296 1.9E-129 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VEA_001304 36234af4f9f88ed4d8dbff0d59ca0fa3 410 SUPERFAMILY SSF51182 19 397 3.74E-103 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily VEA_003877 b9195606e9505f59e1fde297bfd6b2f2 449 Gene3D G3DSA:1.10.8.60 166 241 4.7E-23 T 13-10-2018 VEA_003877 b9195606e9505f59e1fde297bfd6b2f2 449 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 54 159 1.0E-16 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VEA_003877 b9195606e9505f59e1fde297bfd6b2f2 449 Pfam PF12002 MgsA AAA+ ATPase C terminal 269 435 1.7E-67 T 13-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal VEA_003877 b9195606e9505f59e1fde297bfd6b2f2 449 Gene3D G3DSA:1.20.272.10 242 346 1.3E-43 T 13-10-2018 VEA_003877 b9195606e9505f59e1fde297bfd6b2f2 449 Gene3D G3DSA:3.40.50.300 3 165 1.1E-48 T 13-10-2018 VEA_003877 b9195606e9505f59e1fde297bfd6b2f2 449 SUPERFAMILY SSF48019 253 435 2.32E-73 T 13-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 VEA_003877 b9195606e9505f59e1fde297bfd6b2f2 449 SUPERFAMILY SSF52540 11 236 6.24E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003877 b9195606e9505f59e1fde297bfd6b2f2 449 Gene3D G3DSA:1.10.3710.10 347 448 9.6E-37 T 13-10-2018 VEA_003877 b9195606e9505f59e1fde297bfd6b2f2 449 SMART SM00382 50 166 3.8E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_003877 b9195606e9505f59e1fde297bfd6b2f2 449 Pfam PF16193 AAA C-terminal domain 191 268 2.4E-21 T 13-10-2018 IPR032423 AAA C-terminal domain VEA_003493 e6cc7608b2d9e7614aa6164ac0b39ae9 202 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VEA_003493 e6cc7608b2d9e7614aa6164ac0b39ae9 202 Pfam PF13247 4Fe-4S dicluster domain 54 125 8.1E-10 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEA_003493 e6cc7608b2d9e7614aa6164ac0b39ae9 202 Gene3D G3DSA:3.30.70.20 63 120 9.6E-34 T 13-10-2018 VEA_003493 e6cc7608b2d9e7614aa6164ac0b39ae9 202 Gene3D G3DSA:3.30.70.20 5 181 9.6E-34 T 13-10-2018 VEA_003493 e6cc7608b2d9e7614aa6164ac0b39ae9 202 SUPERFAMILY SSF54862 1 183 1.26E-47 T 13-10-2018 VEA_004495 341747a6e5a2ff79b9822acb971ffe87 493 SUPERFAMILY SSF63418 18 105 6.54E-21 T 13-10-2018 IPR035911 MurE/MurF, N-terminal VEA_004495 341747a6e5a2ff79b9822acb971ffe87 493 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 25 489 8.3E-170 T 13-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 VEA_004495 341747a6e5a2ff79b9822acb971ffe87 493 Gene3D G3DSA:3.40.1390.10 4 106 6.0E-26 T 13-10-2018 VEA_004495 341747a6e5a2ff79b9822acb971ffe87 493 SUPERFAMILY SSF53244 338 489 3.97E-49 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VEA_004495 341747a6e5a2ff79b9822acb971ffe87 493 Gene3D G3DSA:3.90.190.20 340 491 4.3E-55 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VEA_004495 341747a6e5a2ff79b9822acb971ffe87 493 Pfam PF01225 Mur ligase family, catalytic domain 26 102 1.8E-10 T 13-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 VEA_004495 341747a6e5a2ff79b9822acb971ffe87 493 Pfam PF08245 Mur ligase middle domain 115 316 4.5E-52 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VEA_004495 341747a6e5a2ff79b9822acb971ffe87 493 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 5 489 34.121 T 13-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 VEA_004495 341747a6e5a2ff79b9822acb971ffe87 493 Gene3D G3DSA:3.40.1190.10 108 339 4.3E-80 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VEA_004495 341747a6e5a2ff79b9822acb971ffe87 493 Pfam PF02875 Mur ligase family, glutamate ligase domain 339 422 1.7E-24 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VEA_004495 341747a6e5a2ff79b9822acb971ffe87 493 SUPERFAMILY SSF53623 109 336 4.71E-74 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VEA_001634 3244189837f1ead52c04812d7f54512d 176 Gene3D G3DSA:1.20.120.330 1 172 3.6E-72 T 13-10-2018 VEA_001634 3244189837f1ead52c04812d7f54512d 176 SUPERFAMILY SSF158668 4 170 2.62E-58 T 13-10-2018 IPR038026 MtlR-like superfamily VEA_001634 3244189837f1ead52c04812d7f54512d 176 Pfam PF05068 Mannitol repressor 7 170 2.1E-61 T 13-10-2018 IPR007761 Mannitol repressor MtlR-like VEA_000088 2f505448fb0d8d7850a17284f43d16af 411 PRINTS PR00714 Phosphomannose isomerase type I signature 14 32 7.6E-69 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEA_000088 2f505448fb0d8d7850a17284f43d16af 411 PRINTS PR00714 Phosphomannose isomerase type I signature 258 277 7.6E-69 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEA_000088 2f505448fb0d8d7850a17284f43d16af 411 PRINTS PR00714 Phosphomannose isomerase type I signature 296 315 7.6E-69 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEA_000088 2f505448fb0d8d7850a17284f43d16af 411 PRINTS PR00714 Phosphomannose isomerase type I signature 242 257 7.6E-69 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEA_000088 2f505448fb0d8d7850a17284f43d16af 411 PRINTS PR00714 Phosphomannose isomerase type I signature 135 158 7.6E-69 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEA_000088 2f505448fb0d8d7850a17284f43d16af 411 PRINTS PR00714 Phosphomannose isomerase type I signature 42 57 7.6E-69 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEA_000088 2f505448fb0d8d7850a17284f43d16af 411 PRINTS PR00714 Phosphomannose isomerase type I signature 90 111 7.6E-69 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEA_000088 2f505448fb0d8d7850a17284f43d16af 411 PRINTS PR00714 Phosphomannose isomerase type I signature 277 296 7.6E-69 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEA_000088 2f505448fb0d8d7850a17284f43d16af 411 PIRSF PIRSF001480 8 411 3.1E-104 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEA_000088 2f505448fb0d8d7850a17284f43d16af 411 SUPERFAMILY SSF51182 9 400 4.77E-105 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily VEA_000088 2f505448fb0d8d7850a17284f43d16af 411 Gene3D G3DSA:2.60.120.10 16 297 9.1E-130 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VEA_000088 2f505448fb0d8d7850a17284f43d16af 411 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 277 302 - T 13-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEA_000088 2f505448fb0d8d7850a17284f43d16af 411 Pfam PF01238 Phosphomannose isomerase type I 12 375 1.3E-85 T 13-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEA_000088 2f505448fb0d8d7850a17284f43d16af 411 Gene3D G3DSA:2.60.120.10 323 403 9.1E-130 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VEA_000088 2f505448fb0d8d7850a17284f43d16af 411 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 10 403 2.0E-91 T 13-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEA_000088 2f505448fb0d8d7850a17284f43d16af 411 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 135 143 - T 13-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VEA_000088 2f505448fb0d8d7850a17284f43d16af 411 Gene3D G3DSA:1.10.441.10 159 322 9.1E-130 T 13-10-2018 VEA_001930 d9f18ea047f36d522c9d8eaa510d6e6a 815 Pfam PF00563 EAL domain 572 807 2.7E-75 T 13-10-2018 IPR001633 EAL domain VEA_001930 d9f18ea047f36d522c9d8eaa510d6e6a 815 SMART SM00091 146 212 10.0 T 13-10-2018 IPR000014 PAS domain VEA_001930 d9f18ea047f36d522c9d8eaa510d6e6a 815 SMART SM00091 269 335 1.5E-7 T 13-10-2018 IPR000014 PAS domain VEA_001930 d9f18ea047f36d522c9d8eaa510d6e6a 815 SUPERFAMILY SSF55785 277 380 6.81E-29 T 13-10-2018 IPR035965 PAS domain superfamily VEA_001930 d9f18ea047f36d522c9d8eaa510d6e6a 815 SUPERFAMILY SSF141868 572 813 9.81E-90 T 13-10-2018 IPR035919 EAL domain superfamily VEA_001930 d9f18ea047f36d522c9d8eaa510d6e6a 815 Gene3D G3DSA:3.30.70.270 393 569 7.3E-59 T 13-10-2018 VEA_001930 d9f18ea047f36d522c9d8eaa510d6e6a 815 Gene3D G3DSA:3.30.450.20 271 392 6.5E-37 T 13-10-2018 VEA_001930 d9f18ea047f36d522c9d8eaa510d6e6a 815 Pfam PF00990 Diguanylate cyclase, GGDEF domain 394 551 2.5E-47 T 13-10-2018 IPR000160 GGDEF domain VEA_001930 d9f18ea047f36d522c9d8eaa510d6e6a 815 Gene3D G3DSA:3.20.20.450 570 815 4.3E-102 T 13-10-2018 IPR035919 EAL domain superfamily VEA_001930 d9f18ea047f36d522c9d8eaa510d6e6a 815 Pfam PF13426 PAS domain 280 381 1.8E-18 T 13-10-2018 IPR000014 PAS domain VEA_001930 d9f18ea047f36d522c9d8eaa510d6e6a 815 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 390 554 4.1E-43 T 13-10-2018 IPR000160 GGDEF domain VEA_001930 d9f18ea047f36d522c9d8eaa510d6e6a 815 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 151 268 6.7E-7 T 13-10-2018 IPR000014 PAS domain VEA_001930 d9f18ea047f36d522c9d8eaa510d6e6a 815 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 273 390 1.0E-23 T 13-10-2018 IPR000014 PAS domain VEA_001930 d9f18ea047f36d522c9d8eaa510d6e6a 815 Gene3D G3DSA:3.30.450.20 131 270 6.1E-21 T 13-10-2018 VEA_001930 d9f18ea047f36d522c9d8eaa510d6e6a 815 SUPERFAMILY SSF55073 399 558 1.96E-46 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_001930 d9f18ea047f36d522c9d8eaa510d6e6a 815 Pfam PF08448 PAS fold 158 262 6.5E-10 T 13-10-2018 IPR013656 PAS fold-4 VEA_001930 d9f18ea047f36d522c9d8eaa510d6e6a 815 SMART SM00267 383 556 1.7E-62 T 13-10-2018 IPR000160 GGDEF domain VEA_001930 d9f18ea047f36d522c9d8eaa510d6e6a 815 SMART SM00052 566 812 1.5E-120 T 13-10-2018 IPR001633 EAL domain VEA_001930 d9f18ea047f36d522c9d8eaa510d6e6a 815 SUPERFAMILY SSF55785 152 262 3.32E-16 T 13-10-2018 IPR035965 PAS domain superfamily VEA_001930 d9f18ea047f36d522c9d8eaa510d6e6a 815 SMART SM00086 341 383 7.5E-8 T 13-10-2018 IPR001610 PAC motif VEA_001930 d9f18ea047f36d522c9d8eaa510d6e6a 815 SMART SM00086 219 261 3.6 T 13-10-2018 IPR001610 PAC motif VEA_000398 ef0704487c807b36f30d310e362cfc90 400 Pfam PF00501 AMP-binding enzyme 123 275 8.0E-12 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VEA_000398 ef0704487c807b36f30d310e362cfc90 400 Gene3D G3DSA:3.40.50.12780 2 316 7.2E-61 T 13-10-2018 VEA_000398 ef0704487c807b36f30d310e362cfc90 400 SUPERFAMILY SSF56801 116 340 1.83E-30 T 13-10-2018 VEA_000485 c8791551734a561358c461a3ef43ad14 667 SUPERFAMILY SSF75011 6 320 1.96E-11 T 13-10-2018 VEA_000485 c8791551734a561358c461a3ef43ad14 667 TIGRFAM TIGR04456 LruC_dom: LruC domain 406 657 3.3E-83 T 13-10-2018 IPR031025 LruC domain VEA_000485 c8791551734a561358c461a3ef43ad14 667 Pfam PF16130 Domain of unknown function (DUF4842) 439 656 1.3E-57 T 13-10-2018 IPR032295 Domain of unknown function DUF4842 VEA_000485 c8791551734a561358c461a3ef43ad14 667 Gene3D G3DSA:2.120.10.30 19 220 1.2E-6 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like VEA_001446 def141f9ee2061f5e05286e40818b21d 543 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 267 321 - T 13-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001446 def141f9ee2061f5e05286e40818b21d 543 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 47 489 7.4E-151 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001446 def141f9ee2061f5e05286e40818b21d 543 Gene3D G3DSA:1.20.210.10 26 543 9.6E-219 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001446 def141f9ee2061f5e05286e40818b21d 543 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 39 542 8.8E-214 T 13-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 VEA_001446 def141f9ee2061f5e05286e40818b21d 543 SUPERFAMILY SSF81442 35 542 1.13E-193 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001446 def141f9ee2061f5e05286e40818b21d 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 311 326 4.6E-122 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001446 def141f9ee2061f5e05286e40818b21d 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 38 63 4.6E-122 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001446 def141f9ee2061f5e05286e40818b21d 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 112 136 4.6E-122 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001446 def141f9ee2061f5e05286e40818b21d 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 155 167 4.6E-122 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001446 def141f9ee2061f5e05286e40818b21d 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 370 388 4.6E-122 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001446 def141f9ee2061f5e05286e40818b21d 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 398 417 4.6E-122 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001446 def141f9ee2061f5e05286e40818b21d 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 214 233 4.6E-122 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001446 def141f9ee2061f5e05286e40818b21d 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 265 286 4.6E-122 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001446 def141f9ee2061f5e05286e40818b21d 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 85 108 4.6E-122 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001446 def141f9ee2061f5e05286e40818b21d 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 335 356 4.6E-122 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001446 def141f9ee2061f5e05286e40818b21d 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 185 203 4.6E-122 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001446 def141f9ee2061f5e05286e40818b21d 543 PRINTS PR01165 Cytochrome c oxidase subunit I signature 448 469 4.6E-122 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_002346 46924b4d533a1027d1f465d2e771525a 315 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 311 50.324 T 13-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 VEA_002346 46924b4d533a1027d1f465d2e771525a 315 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 76 94 - T 13-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 VEA_002346 46924b4d533a1027d1f465d2e771525a 315 Pfam PF01207 Dihydrouridine synthase (Dus) 1 304 3.7E-93 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VEA_002346 46924b4d533a1027d1f465d2e771525a 315 Gene3D G3DSA:1.20.120.1460 239 314 1.6E-23 T 13-10-2018 VEA_002346 46924b4d533a1027d1f465d2e771525a 315 SUPERFAMILY SSF51395 1 308 1.3E-71 T 13-10-2018 VEA_002346 46924b4d533a1027d1f465d2e771525a 315 PIRSF PIRSF006621 1 312 5.3E-72 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VEA_002346 46924b4d533a1027d1f465d2e771525a 315 Gene3D G3DSA:3.20.20.70 1 234 1.4E-69 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_002346 46924b4d533a1027d1f465d2e771525a 315 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 1 309 1.5E-157 T 13-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 VEA_002572 4caab31ab98e2b0cdbe6061ce8402a04 112 PIRSF PIRSF039144 1 112 1.8E-55 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VEA_002572 4caab31ab98e2b0cdbe6061ce8402a04 112 SUPERFAMILY SSF54913 1 112 4.13E-45 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta VEA_002572 4caab31ab98e2b0cdbe6061ce8402a04 112 PRINTS PR00340 P-II protein signature 83 103 1.2E-40 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VEA_002572 4caab31ab98e2b0cdbe6061ce8402a04 112 PRINTS PR00340 P-II protein signature 23 41 1.2E-40 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VEA_002572 4caab31ab98e2b0cdbe6061ce8402a04 112 PRINTS PR00340 P-II protein signature 52 75 1.2E-40 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VEA_002572 4caab31ab98e2b0cdbe6061ce8402a04 112 PRINTS PR00340 P-II protein signature 2 17 1.2E-40 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VEA_002572 4caab31ab98e2b0cdbe6061ce8402a04 112 Gene3D G3DSA:3.30.70.120 1 112 1.2E-46 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VEA_002572 4caab31ab98e2b0cdbe6061ce8402a04 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 13-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 VEA_002572 4caab31ab98e2b0cdbe6061ce8402a04 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 13-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 VEA_002572 4caab31ab98e2b0cdbe6061ce8402a04 112 SMART SM00938 4 105 3.7E-68 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VEA_002572 4caab31ab98e2b0cdbe6061ce8402a04 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.1E-43 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VEA_001729 9a792ab9bfe665f5279fa396abd19e70 101 SUPERFAMILY SSF57716 2 101 7.84E-37 T 13-10-2018 VEA_001729 9a792ab9bfe665f5279fa396abd19e70 101 Pfam PF00253 Ribosomal protein S14p/S29e 48 100 1.3E-24 T 13-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_001729 9a792ab9bfe665f5279fa396abd19e70 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 13-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001729 9a792ab9bfe665f5279fa396abd19e70 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.619 T 13-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid VEA_001729 9a792ab9bfe665f5279fa396abd19e70 101 Gene3D G3DSA:4.10.830.10 43 101 5.7E-23 T 13-10-2018 VEA_004505 75049cd3060d91fd431d6541392bd365 156 Pfam PF04386 Stringent starvation protein B 4 156 5.0E-43 T 13-10-2018 IPR007481 Stringent starvation protein B VEA_004505 75049cd3060d91fd431d6541392bd365 156 PIRSF PIRSF005276 1 156 5.2E-62 T 13-10-2018 IPR007481 Stringent starvation protein B VEA_004505 75049cd3060d91fd431d6541392bd365 156 Gene3D G3DSA:2.30.30.220 1 126 4.7E-53 T 13-10-2018 IPR036760 SspB-like superfamily VEA_004505 75049cd3060d91fd431d6541392bd365 156 SUPERFAMILY SSF101738 1 115 2.49E-49 T 13-10-2018 IPR036760 SspB-like superfamily VEA_003198 8c8c14c5c7d79fca6612220c423e6da0 215 Pfam PF13643 Domain of unknown function (DUF4145) 105 192 2.7E-21 T 13-10-2018 IPR025285 Domain of unknown function DUF4145 VEA_003094 6c3ad074f17f66e20387a96a544659b0 106 Hamap MF_00680 UPF0263 protein YciU [yciU]. 1 106 36.434 T 13-10-2018 IPR007376 dsDNA mimic, putative VEA_003094 6c3ad074f17f66e20387a96a544659b0 106 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 8 104 4.0E-50 T 13-10-2018 IPR007376 dsDNA mimic, putative VEA_003094 6c3ad074f17f66e20387a96a544659b0 106 Pfam PF04269 Protein of unknown function, DUF440 5 105 1.8E-45 T 13-10-2018 IPR007376 dsDNA mimic, putative VEA_003094 6c3ad074f17f66e20387a96a544659b0 106 PIRSF PIRSF004916 1 105 1.4E-52 T 13-10-2018 IPR007376 dsDNA mimic, putative VEA_003094 6c3ad074f17f66e20387a96a544659b0 106 SUPERFAMILY SSF102816 3 105 8.37E-50 T 13-10-2018 IPR036763 Putative dsDNA mimic superfamily VEA_003094 6c3ad074f17f66e20387a96a544659b0 106 Gene3D G3DSA:3.10.450.140 5 105 9.8E-43 T 13-10-2018 IPR036763 Putative dsDNA mimic superfamily VEA_003404 33a7de2400f92bcb72368fb1b7111164 4848 Gene3D G3DSA:2.60.40.60 3386 3483 1.1E-14 T 13-10-2018 VEA_003404 33a7de2400f92bcb72368fb1b7111164 4848 SMART SM00112 3409 3486 1.1E-8 T 13-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 VEA_003404 33a7de2400f92bcb72368fb1b7111164 4848 SUPERFAMILY SSF51120 4624 4794 3.14E-23 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VEA_003404 33a7de2400f92bcb72368fb1b7111164 4848 Pfam PF13519 von Willebrand factor type A domain 4358 4475 4.4E-11 T 13-10-2018 IPR002035 von Willebrand factor, type A VEA_003404 33a7de2400f92bcb72368fb1b7111164 4848 SUPERFAMILY SSF49313 3393 3477 2.09E-12 T 13-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 VEA_003404 33a7de2400f92bcb72368fb1b7111164 4848 Pfam PF00028 Cadherin domain 3394 3476 3.1E-10 T 13-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 VEA_003404 33a7de2400f92bcb72368fb1b7111164 4848 SUPERFAMILY SSF51120 4084 4173 4.19E-6 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VEA_003404 33a7de2400f92bcb72368fb1b7111164 4848 Gene3D G3DSA:2.150.10.10 4069 4179 2.8E-5 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VEA_003404 33a7de2400f92bcb72368fb1b7111164 4848 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 4705 4723 - T 13-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VEA_003404 33a7de2400f92bcb72368fb1b7111164 4848 Gene3D G3DSA:2.150.10.10 4685 4841 1.6E-20 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VEA_003404 33a7de2400f92bcb72368fb1b7111164 4848 SUPERFAMILY SSF141072 2911 3025 8.11E-7 T 13-10-2018 IPR038081 CalX-like domain superfamily VEA_003404 33a7de2400f92bcb72368fb1b7111164 4848 SMART SM00237 3249 3346 0.067 T 13-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VEA_003404 33a7de2400f92bcb72368fb1b7111164 4848 SMART SM00237 3140 3234 1.1E-4 T 13-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VEA_003404 33a7de2400f92bcb72368fb1b7111164 4848 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 4714 4732 - T 13-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VEA_003404 33a7de2400f92bcb72368fb1b7111164 4848 SMART SM00736 1751 1846 0.021 T 13-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 VEA_003404 33a7de2400f92bcb72368fb1b7111164 4848 SMART SM00736 1198 1290 0.093 T 13-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 VEA_003404 33a7de2400f92bcb72368fb1b7111164 4848 SMART SM00736 2029 2124 0.017 T 13-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 VEA_003404 33a7de2400f92bcb72368fb1b7111164 4848 SMART SM00736 2411 2503 0.031 T 13-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 VEA_003404 33a7de2400f92bcb72368fb1b7111164 4848 SMART SM00736 437 532 0.036 T 13-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 VEA_003404 33a7de2400f92bcb72368fb1b7111164 4848 SMART SM00736 1473 1568 0.026 T 13-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 VEA_003404 33a7de2400f92bcb72368fb1b7111164 4848 SMART SM00736 819 911 0.063 T 13-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 VEA_003404 33a7de2400f92bcb72368fb1b7111164 4848 SMART SM00327 4355 4529 6.7E-8 T 13-10-2018 IPR002035 von Willebrand factor, type A VEA_003404 33a7de2400f92bcb72368fb1b7111164 4848 PRINTS PR00313 NodO calcium binding signature 4697 4708 3.8E-7 T 13-10-2018 VEA_003404 33a7de2400f92bcb72368fb1b7111164 4848 PRINTS PR00313 NodO calcium binding signature 4727 4735 3.8E-7 T 13-10-2018 VEA_003404 33a7de2400f92bcb72368fb1b7111164 4848 PRINTS PR00313 NodO calcium binding signature 4718 4726 3.8E-7 T 13-10-2018 VEA_003404 33a7de2400f92bcb72368fb1b7111164 4848 PRINTS PR00313 NodO calcium binding signature 4736 4745 3.8E-7 T 13-10-2018 VEA_003404 33a7de2400f92bcb72368fb1b7111164 4848 SUPERFAMILY SSF141072 3260 3368 4.97E-14 T 13-10-2018 IPR038081 CalX-like domain superfamily VEA_003404 33a7de2400f92bcb72368fb1b7111164 4848 SUPERFAMILY SSF141072 3147 3255 1.44E-14 T 13-10-2018 IPR038081 CalX-like domain superfamily VEA_003404 33a7de2400f92bcb72368fb1b7111164 4848 SUPERFAMILY SSF53300 4317 4594 9.38E-20 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VEA_003404 33a7de2400f92bcb72368fb1b7111164 4848 SUPERFAMILY SSF141072 3029 3147 5.36E-7 T 13-10-2018 IPR038081 CalX-like domain superfamily VEA_003404 33a7de2400f92bcb72368fb1b7111164 4848 Gene3D G3DSA:2.60.40.2030 3150 3257 1.7E-6 T 13-10-2018 IPR038081 CalX-like domain superfamily VEA_003404 33a7de2400f92bcb72368fb1b7111164 4848 Gene3D G3DSA:2.60.40.2030 3260 3371 2.6E-6 T 13-10-2018 IPR038081 CalX-like domain superfamily VEA_003404 33a7de2400f92bcb72368fb1b7111164 4848 Gene3D G3DSA:2.60.40.10 1194 1284 3.3E-5 T 13-10-2018 IPR013783 Immunoglobulin-like fold VEA_003404 33a7de2400f92bcb72368fb1b7111164 4848 Gene3D G3DSA:2.60.40.10 2407 2497 2.6E-7 T 13-10-2018 IPR013783 Immunoglobulin-like fold VEA_003404 33a7de2400f92bcb72368fb1b7111164 4848 Gene3D G3DSA:2.60.40.10 2025 2120 2.4E-6 T 13-10-2018 IPR013783 Immunoglobulin-like fold VEA_003404 33a7de2400f92bcb72368fb1b7111164 4848 Gene3D G3DSA:2.60.40.10 815 905 5.6E-7 T 13-10-2018 IPR013783 Immunoglobulin-like fold VEA_003404 33a7de2400f92bcb72368fb1b7111164 4848 Gene3D G3DSA:2.60.40.10 1469 1562 9.0E-6 T 13-10-2018 IPR013783 Immunoglobulin-like fold VEA_003404 33a7de2400f92bcb72368fb1b7111164 4848 Gene3D G3DSA:2.60.40.10 1747 1840 3.4E-6 T 13-10-2018 IPR013783 Immunoglobulin-like fold VEA_003404 33a7de2400f92bcb72368fb1b7111164 4848 Gene3D G3DSA:2.60.40.10 433 526 2.1E-7 T 13-10-2018 IPR013783 Immunoglobulin-like fold VEA_003404 33a7de2400f92bcb72368fb1b7111164 4848 Gene3D G3DSA:3.40.50.410 4353 4524 1.6E-16 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VEA_003347 e718548c3147f73005c8d66e2c5fa1d4 143 Pfam PF05932 Tir chaperone protein (CesT) family 9 73 4.8E-8 T 13-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 VEA_003347 e718548c3147f73005c8d66e2c5fa1d4 143 Gene3D G3DSA:3.30.1460.10 1 118 3.0E-23 T 13-10-2018 VEA_003347 e718548c3147f73005c8d66e2c5fa1d4 143 SUPERFAMILY SSF69635 4 117 2.15E-28 T 13-10-2018 VEA_001787 10cbac7ae9496c79d0092fe301832597 579 Pfam PF10531 SLBB domain 484 530 8.3E-6 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEA_001787 10cbac7ae9496c79d0092fe301832597 579 Pfam PF02563 Polysaccharide biosynthesis/export protein 109 182 3.1E-14 T 13-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 VEA_001787 10cbac7ae9496c79d0092fe301832597 579 Gene3D G3DSA:3.30.1950.10 116 182 2.4E-5 T 13-10-2018 VEA_001787 10cbac7ae9496c79d0092fe301832597 579 Gene3D G3DSA:3.10.560.10 479 554 8.4E-8 T 13-10-2018 VEA_001787 10cbac7ae9496c79d0092fe301832597 579 Gene3D G3DSA:3.10.560.10 183 268 3.1E-9 T 13-10-2018 VEA_000054 c354e5006205a765c3b495a35784ec9d 409 TIGRFAM TIGR00492 alr: alanine racemase 45 408 2.7E-71 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEA_000054 c354e5006205a765c3b495a35784ec9d 409 PRINTS PR00992 Alanine racemase signature 313 328 2.2E-29 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEA_000054 c354e5006205a765c3b495a35784ec9d 409 PRINTS PR00992 Alanine racemase signature 166 178 2.2E-29 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEA_000054 c354e5006205a765c3b495a35784ec9d 409 PRINTS PR00992 Alanine racemase signature 245 272 2.2E-29 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEA_000054 c354e5006205a765c3b495a35784ec9d 409 PRINTS PR00992 Alanine racemase signature 68 84 2.2E-29 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEA_000054 c354e5006205a765c3b495a35784ec9d 409 PRINTS PR00992 Alanine racemase signature 334 351 2.2E-29 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEA_000054 c354e5006205a765c3b495a35784ec9d 409 PRINTS PR00992 Alanine racemase signature 202 213 2.2E-29 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEA_000054 c354e5006205a765c3b495a35784ec9d 409 PRINTS PR00992 Alanine racemase signature 104 122 2.2E-29 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEA_000054 c354e5006205a765c3b495a35784ec9d 409 SUPERFAMILY SSF51419 49 283 2.49E-47 T 13-10-2018 IPR029066 PLP-binding barrel VEA_000054 c354e5006205a765c3b495a35784ec9d 409 Gene3D G3DSA:3.20.20.10 51 268 1.3E-128 T 13-10-2018 IPR029066 PLP-binding barrel VEA_000054 c354e5006205a765c3b495a35784ec9d 409 Pfam PF00842 Alanine racemase, C-terminal domain 281 407 1.8E-32 T 13-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEA_000054 c354e5006205a765c3b495a35784ec9d 409 Pfam PF01168 Alanine racemase, N-terminal domain 49 272 1.4E-51 T 13-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEA_000054 c354e5006205a765c3b495a35784ec9d 409 SUPERFAMILY SSF50621 273 408 1.33E-39 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VEA_000054 c354e5006205a765c3b495a35784ec9d 409 SMART SM01005 280 408 1.6E-48 T 13-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEA_000054 c354e5006205a765c3b495a35784ec9d 409 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 73 83 - T 13-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEA_000054 c354e5006205a765c3b495a35784ec9d 409 Hamap MF_01201 Alanine racemase. 42 408 26.118 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEA_000054 c354e5006205a765c3b495a35784ec9d 409 Gene3D G3DSA:2.40.37.10 45 404 1.3E-128 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VEA_003689 8c2c1f1b2fc0d43bf4b2d2b7fd0b71fd 598 Pfam PF08439 Oligopeptidase F 107 174 5.8E-11 T 13-10-2018 IPR013647 Oligopeptidase F, N-terminal domain VEA_003689 8c2c1f1b2fc0d43bf4b2d2b7fd0b71fd 598 SUPERFAMILY SSF55486 4 576 2.42E-96 T 13-10-2018 VEA_003689 8c2c1f1b2fc0d43bf4b2d2b7fd0b71fd 598 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 5 593 5.6E-200 T 13-10-2018 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 VEA_003689 8c2c1f1b2fc0d43bf4b2d2b7fd0b71fd 598 Gene3D G3DSA:1.10.1370.20 219 597 4.6E-107 T 13-10-2018 VEA_003689 8c2c1f1b2fc0d43bf4b2d2b7fd0b71fd 598 Gene3D G3DSA:1.20.140.70 19 170 2.0E-9 T 13-10-2018 VEA_003689 8c2c1f1b2fc0d43bf4b2d2b7fd0b71fd 598 Pfam PF01432 Peptidase family M3 339 579 3.6E-22 T 13-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 VEA_000583 e69459e442709c0ab5d1427f88281fc9 551 Gene3D G3DSA:3.40.720.10 218 551 5.9E-83 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VEA_000583 e69459e442709c0ab5d1427f88281fc9 551 SUPERFAMILY SSF53649 354 536 9.35E-17 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VEA_000583 e69459e442709c0ab5d1427f88281fc9 551 Pfam PF08019 Domain of unknown function (DUF1705) 59 211 3.0E-47 T 13-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 VEA_000583 e69459e442709c0ab5d1427f88281fc9 551 Pfam PF00884 Sulfatase 242 532 3.6E-42 T 13-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VEA_004387 74e84308fe83ea7f047204fa1fddef39 466 ProSitePatterns PS01276 Peptidase family U32 signature. 167 185 - T 13-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VEA_004387 74e84308fe83ea7f047204fa1fddef39 466 Pfam PF16325 Peptidase family U32 C-terminal domain 372 452 6.3E-21 T 13-10-2018 IPR032525 Peptidase family U32, C-terminal VEA_004387 74e84308fe83ea7f047204fa1fddef39 466 Gene3D G3DSA:2.40.30.10 367 453 3.2E-8 T 13-10-2018 VEA_004387 74e84308fe83ea7f047204fa1fddef39 466 Pfam PF01136 Peptidase family U32 80 355 2.5E-96 T 13-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VEA_004452 fb0a6e9edddf739d8fadc9cf851f783a 295 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 78 86 - T 13-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 VEA_004452 fb0a6e9edddf739d8fadc9cf851f783a 295 SMART SM00518 12 288 1.7E-123 T 13-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VEA_004452 fb0a6e9edddf739d8fadc9cf851f783a 295 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 184 191 - T 13-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 VEA_004452 fb0a6e9edddf739d8fadc9cf851f783a 295 SUPERFAMILY SSF51658 12 286 2.23E-100 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily VEA_004452 fb0a6e9edddf739d8fadc9cf851f783a 295 Hamap MF_00152 Probable endonuclease 4 [nfo]. 11 288 42.59 T 13-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VEA_004452 fb0a6e9edddf739d8fadc9cf851f783a 295 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 224 240 - T 13-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 VEA_004452 fb0a6e9edddf739d8fadc9cf851f783a 295 Gene3D G3DSA:3.20.20.150 10 291 1.4E-112 T 13-10-2018 VEA_004452 fb0a6e9edddf739d8fadc9cf851f783a 295 Pfam PF01261 Xylose isomerase-like TIM barrel 29 248 1.2E-42 T 13-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain VEA_004452 fb0a6e9edddf739d8fadc9cf851f783a 295 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 11 287 4.2E-108 T 13-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VEA_001938 8cd0694c6f7929ca3fccf0c01aff18d2 143 Gene3D G3DSA:1.20.120.520 1 139 8.4E-9 T 13-10-2018 VEA_001938 8cd0694c6f7929ca3fccf0c01aff18d2 143 Pfam PF01814 Hemerythrin HHE cation binding domain 4 121 3.5E-12 T 13-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 VEA_002953 fad4ad4a8d006ba8fd0bb7bf256b5671 298 Gene3D G3DSA:3.40.50.12300 4 297 1.3E-79 T 13-10-2018 IPR038136 Gluconeogenesis factor superfamily VEA_002953 fad4ad4a8d006ba8fd0bb7bf256b5671 298 Pfam PF01933 Uncharacterised protein family UPF0052 9 283 3.5E-75 T 13-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 VEA_002953 fad4ad4a8d006ba8fd0bb7bf256b5671 298 Hamap MF_00973 Gluconeogenesis factor. 5 296 30.591 T 13-10-2018 IPR010119 Gluconeogenesis factor VEA_002953 fad4ad4a8d006ba8fd0bb7bf256b5671 298 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 9 275 4.6E-102 T 13-10-2018 IPR010119 Gluconeogenesis factor VEA_002953 fad4ad4a8d006ba8fd0bb7bf256b5671 298 SUPERFAMILY SSF142338 6 290 8.76E-83 T 13-10-2018 VEA_002753 837b140f0a8b73f50d12772842e38458 452 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 4 452 6.3E-138 T 13-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 VEA_002753 837b140f0a8b73f50d12772842e38458 452 Gene3D G3DSA:2.30.42.10 126 221 1.4E-31 T 13-10-2018 VEA_002753 837b140f0a8b73f50d12772842e38458 452 SUPERFAMILY SSF50156 195 293 2.1E-18 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 VEA_002753 837b140f0a8b73f50d12772842e38458 452 Gene3D G3DSA:2.30.42.10 222 311 3.9E-22 T 13-10-2018 VEA_002753 837b140f0a8b73f50d12772842e38458 452 SMART SM00228 115 186 1.4 T 13-10-2018 IPR001478 PDZ domain GO:0005515 VEA_002753 837b140f0a8b73f50d12772842e38458 452 SMART SM00228 212 281 5.3E-10 T 13-10-2018 IPR001478 PDZ domain GO:0005515 VEA_002753 837b140f0a8b73f50d12772842e38458 452 Pfam PF13180 PDZ domain 226 288 1.1E-9 T 13-10-2018 IPR001478 PDZ domain GO:0005515 VEA_002753 837b140f0a8b73f50d12772842e38458 452 SUPERFAMILY SSF50156 89 183 2.76E-10 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 VEA_002753 837b140f0a8b73f50d12772842e38458 452 Pfam PF02163 Peptidase family M50 11 440 1.4E-87 T 13-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 VEA_003443 d75edc8b4995b413d4f920a9d1e2af6a 172 Gene3D G3DSA:3.10.129.10 2 172 1.4E-65 T 13-10-2018 VEA_003443 d75edc8b4995b413d4f920a9d1e2af6a 172 SUPERFAMILY SSF54637 4 169 6.47E-57 T 13-10-2018 IPR029069 HotDog domain superfamily VEA_003443 d75edc8b4995b413d4f920a9d1e2af6a 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 51.396 T 13-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VEA_003443 d75edc8b4995b413d4f920a9d1e2af6a 172 Pfam PF07977 FabA-like domain 29 158 3.4E-54 T 13-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VEA_003443 d75edc8b4995b413d4f920a9d1e2af6a 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 3.1E-92 T 13-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VEA_001152 1f4e36ffa08f467c45b5a2074c6d96c5 151 Pfam PF00583 Acetyltransferase (GNAT) family 32 129 6.4E-16 T 13-10-2018 IPR000182 GNAT domain VEA_001152 1f4e36ffa08f467c45b5a2074c6d96c5 151 Gene3D G3DSA:3.40.630.30 1 151 4.0E-42 T 13-10-2018 VEA_001152 1f4e36ffa08f467c45b5a2074c6d96c5 151 SUPERFAMILY SSF55729 1 150 5.66E-28 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_001892 32bde352397b609145952d20f8e1f71c 672 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 30 619 6.6E-158 T 13-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 VEA_001892 32bde352397b609145952d20f8e1f71c 672 Gene3D G3DSA:3.30.1370.120 21 185 3.3E-52 T 13-10-2018 IPR038591 NolW-like superfamily VEA_001892 32bde352397b609145952d20f8e1f71c 672 PRINTS PR00811 Bacterial general secretion pathway protein D signature 479 489 1.7E-37 T 13-10-2018 IPR001775 GspD/PilQ family VEA_001892 32bde352397b609145952d20f8e1f71c 672 PRINTS PR00811 Bacterial general secretion pathway protein D signature 343 353 1.7E-37 T 13-10-2018 IPR001775 GspD/PilQ family VEA_001892 32bde352397b609145952d20f8e1f71c 672 PRINTS PR00811 Bacterial general secretion pathway protein D signature 574 592 1.7E-37 T 13-10-2018 IPR001775 GspD/PilQ family VEA_001892 32bde352397b609145952d20f8e1f71c 672 PRINTS PR00811 Bacterial general secretion pathway protein D signature 444 468 1.7E-37 T 13-10-2018 IPR001775 GspD/PilQ family VEA_001892 32bde352397b609145952d20f8e1f71c 672 PRINTS PR00811 Bacterial general secretion pathway protein D signature 597 611 1.7E-37 T 13-10-2018 IPR001775 GspD/PilQ family VEA_001892 32bde352397b609145952d20f8e1f71c 672 Gene3D G3DSA:3.30.1370.120 263 341 3.2E-16 T 13-10-2018 IPR038591 NolW-like superfamily VEA_001892 32bde352397b609145952d20f8e1f71c 672 PRINTS PR01032 Gene IV protein signature 590 612 3.2E-13 T 13-10-2018 VEA_001892 32bde352397b609145952d20f8e1f71c 672 PRINTS PR01032 Gene IV protein signature 537 565 3.2E-13 T 13-10-2018 VEA_001892 32bde352397b609145952d20f8e1f71c 672 PRINTS PR01032 Gene IV protein signature 469 492 3.2E-13 T 13-10-2018 VEA_001892 32bde352397b609145952d20f8e1f71c 672 Gene3D G3DSA:3.30.1370.120 188 258 3.8E-20 T 13-10-2018 IPR038591 NolW-like superfamily VEA_001892 32bde352397b609145952d20f8e1f71c 672 Pfam PF00263 Bacterial type II and III secretion system protein 448 610 7.6E-51 T 13-10-2018 IPR004846 Type II/III secretion system GO:0009306 VEA_001892 32bde352397b609145952d20f8e1f71c 672 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 555 588 - T 13-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 VEA_001892 32bde352397b609145952d20f8e1f71c 672 Pfam PF03958 Bacterial type II/III secretion system short domain 191 258 6.8E-16 T 13-10-2018 IPR005644 NolW-like VEA_001892 32bde352397b609145952d20f8e1f71c 672 Pfam PF03958 Bacterial type II/III secretion system short domain 125 186 7.5E-9 T 13-10-2018 IPR005644 NolW-like VEA_001892 32bde352397b609145952d20f8e1f71c 672 Pfam PF03958 Bacterial type II/III secretion system short domain 266 343 4.4E-17 T 13-10-2018 IPR005644 NolW-like VEA_003709 e88ee8c52d25f72da58d45ea1b82823a 792 Gene3D G3DSA:1.20.1640.10 189 399 1.3E-11 T 13-10-2018 VEA_003709 e88ee8c52d25f72da58d45ea1b82823a 792 SUPERFAMILY SSF82866 158 383 4.05E-31 T 13-10-2018 VEA_003709 e88ee8c52d25f72da58d45ea1b82823a 792 Gene3D G3DSA:1.20.1640.10 590 774 3.6E-16 T 13-10-2018 VEA_003709 e88ee8c52d25f72da58d45ea1b82823a 792 Pfam PF03176 MMPL family 101 385 7.4E-22 T 13-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 VEA_003709 e88ee8c52d25f72da58d45ea1b82823a 792 Pfam PF03176 MMPL family 556 779 7.1E-17 T 13-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 VEA_003709 e88ee8c52d25f72da58d45ea1b82823a 792 SUPERFAMILY SSF82866 616 767 4.05E-34 T 13-10-2018 VEA_004174 68f96dff178ff79656a033031893f5a1 275 SUPERFAMILY SSF53335 76 269 1.05E-50 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_004174 68f96dff178ff79656a033031893f5a1 275 SMART SM00138 8 272 1.6E-131 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VEA_004174 68f96dff178ff79656a033031893f5a1 275 Pfam PF01739 CheR methyltransferase, SAM binding domain 76 269 1.1E-68 T 13-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal VEA_004174 68f96dff178ff79656a033031893f5a1 275 Gene3D G3DSA:1.10.155.10 1 74 8.1E-11 T 13-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily VEA_004174 68f96dff178ff79656a033031893f5a1 275 Gene3D G3DSA:3.40.50.150 75 274 2.6E-60 T 13-10-2018 VEA_004174 68f96dff178ff79656a033031893f5a1 275 SUPERFAMILY SSF47757 3 75 1.27E-14 T 13-10-2018 VEA_004174 68f96dff178ff79656a033031893f5a1 275 PRINTS PR00996 Glutamate methyltransferase family signature 143 159 1.3E-43 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VEA_004174 68f96dff178ff79656a033031893f5a1 275 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 1.3E-43 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VEA_004174 68f96dff178ff79656a033031893f5a1 275 PRINTS PR00996 Glutamate methyltransferase family signature 231 254 1.3E-43 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VEA_004174 68f96dff178ff79656a033031893f5a1 275 PRINTS PR00996 Glutamate methyltransferase family signature 212 226 1.3E-43 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VEA_004174 68f96dff178ff79656a033031893f5a1 275 PRINTS PR00996 Glutamate methyltransferase family signature 69 81 1.3E-43 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VEA_004174 68f96dff178ff79656a033031893f5a1 275 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 1.3E-43 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VEA_004174 68f96dff178ff79656a033031893f5a1 275 Pfam PF03705 CheR methyltransferase, all-alpha domain 9 57 6.2E-10 T 13-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal VEA_003235 649c7a9f2787d010e504f738bd740eef 437 SUPERFAMILY SSF116734 218 434 8.01E-49 T 13-10-2018 VEA_003235 649c7a9f2787d010e504f738bd740eef 437 Pfam PF01420 Type I restriction modification DNA specificity domain 234 415 8.5E-19 T 13-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 VEA_003235 649c7a9f2787d010e504f738bd740eef 437 Gene3D G3DSA:3.90.220.20 238 381 1.6E-87 T 13-10-2018 VEA_003235 649c7a9f2787d010e504f738bd740eef 437 Gene3D G3DSA:3.90.220.20 22 432 1.6E-87 T 13-10-2018 VEA_003235 649c7a9f2787d010e504f738bd740eef 437 SUPERFAMILY SSF116734 12 219 8.83E-35 T 13-10-2018 VEA_003235 649c7a9f2787d010e504f738bd740eef 437 Gene3D G3DSA:1.10.287.1120 166 428 1.6E-87 T 13-10-2018 VEA_002259 01391a1b45ec0206ef67ae34c1136525 87 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 6.8E-30 T 13-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 VEA_002259 01391a1b45ec0206ef67ae34c1136525 87 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.727 T 13-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 VEA_002259 01391a1b45ec0206ef67ae34c1136525 87 Gene3D G3DSA:2.30.30.100 1 72 4.7E-35 T 13-10-2018 VEA_002259 01391a1b45ec0206ef67ae34c1136525 87 Pfam PF17209 Hfq protein 7 69 1.7E-31 T 13-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 VEA_002259 01391a1b45ec0206ef67ae34c1136525 87 SUPERFAMILY SSF50182 7 69 1.19E-24 T 13-10-2018 IPR010920 LSM domain superfamily VEA_000223 1d94eaf0b240b9a9fe81fc1a1c162d0c 323 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 8 311 2.5E-104 T 13-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 VEA_000223 1d94eaf0b240b9a9fe81fc1a1c162d0c 323 SUPERFAMILY SSF53613 9 296 7.79E-71 T 13-10-2018 IPR029056 Ribokinase-like VEA_000223 1d94eaf0b240b9a9fe81fc1a1c162d0c 323 Gene3D G3DSA:3.40.1190.20 5 314 3.9E-97 T 13-10-2018 IPR029056 Ribokinase-like VEA_000223 1d94eaf0b240b9a9fe81fc1a1c162d0c 323 PIRSF PIRSF000535 5 314 1.3E-97 T 13-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 VEA_000223 1d94eaf0b240b9a9fe81fc1a1c162d0c 323 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 42 66 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VEA_000223 1d94eaf0b240b9a9fe81fc1a1c162d0c 323 Pfam PF00294 pfkB family carbohydrate kinase 18 297 2.3E-54 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB VEA_000223 1d94eaf0b240b9a9fe81fc1a1c162d0c 323 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 8 311 1.3E-103 T 13-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 VEA_001953 e5a99ac9872aaefaa30fc3a917c0a41b 279 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 277 1.4E-116 T 13-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 VEA_001953 e5a99ac9872aaefaa30fc3a917c0a41b 279 SUPERFAMILY SSF53335 9 273 5.32E-96 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_001953 e5a99ac9872aaefaa30fc3a917c0a41b 279 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.355 T 13-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 VEA_001953 e5a99ac9872aaefaa30fc3a917c0a41b 279 Gene3D G3DSA:3.40.50.150 1 279 8.6E-116 T 13-10-2018 VEA_002566 78f1d5f0bbb79c79528774e62e00a6d9 238 Pfam PF03749 Sugar fermentation stimulation protein 13 229 2.3E-75 T 13-10-2018 IPR005224 Sugar fermentation stimulation protein VEA_002566 78f1d5f0bbb79c79528774e62e00a6d9 238 Gene3D G3DSA:2.40.50.580 1 80 1.1E-28 T 13-10-2018 VEA_002566 78f1d5f0bbb79c79528774e62e00a6d9 238 Gene3D G3DSA:3.40.1350.60 81 237 1.6E-54 T 13-10-2018 VEA_002566 78f1d5f0bbb79c79528774e62e00a6d9 238 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 4 230 1.6E-77 T 13-10-2018 IPR005224 Sugar fermentation stimulation protein VEA_002566 78f1d5f0bbb79c79528774e62e00a6d9 238 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 238 56.472 T 13-10-2018 IPR005224 Sugar fermentation stimulation protein VEA_004265 75fb1b7ae24619d6397caeda9e2d6aca 375 Gene3D G3DSA:3.40.140.10 10 146 8.5E-45 T 13-10-2018 VEA_004265 75fb1b7ae24619d6397caeda9e2d6aca 375 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 157 368 3.3E-52 T 13-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 VEA_004265 75fb1b7ae24619d6397caeda9e2d6aca 375 Pfam PF01872 RibD C-terminal domain 158 358 5.6E-43 T 13-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 VEA_004265 75fb1b7ae24619d6397caeda9e2d6aca 375 Gene3D G3DSA:3.40.430.10 147 373 2.9E-61 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VEA_004265 75fb1b7ae24619d6397caeda9e2d6aca 375 SUPERFAMILY SSF53927 14 156 4.25E-48 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VEA_004265 75fb1b7ae24619d6397caeda9e2d6aca 375 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 61 99 - T 13-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VEA_004265 75fb1b7ae24619d6397caeda9e2d6aca 375 PIRSF PIRSF006769 10 372 1.9E-117 T 13-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 VEA_004265 75fb1b7ae24619d6397caeda9e2d6aca 375 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 16 110 5.9E-20 T 13-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain VEA_004265 75fb1b7ae24619d6397caeda9e2d6aca 375 SUPERFAMILY SSF53597 155 366 1.1E-49 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VEA_004265 75fb1b7ae24619d6397caeda9e2d6aca 375 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 18 365 4.8E-122 T 13-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 VEA_001730 e6172b282c35510ea5bb47df4d577600 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 13-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001730 e6172b282c35510ea5bb47df4d577600 179 Pfam PF00281 Ribosomal protein L5 24 80 2.4E-29 T 13-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001730 e6172b282c35510ea5bb47df4d577600 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 7.1E-41 T 13-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001730 e6172b282c35510ea5bb47df4d577600 179 SUPERFAMILY SSF55282 4 179 1.04E-78 T 13-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001730 e6172b282c35510ea5bb47df4d577600 179 Gene3D G3DSA:3.30.1440.10 1 179 4.1E-81 T 13-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001730 e6172b282c35510ea5bb47df4d577600 179 PIRSF PIRSF002161 1 179 4.4E-66 T 13-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001730 e6172b282c35510ea5bb47df4d577600 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 45.113 T 13-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_004083 600a4cc1c87853f9d83af028cd662125 314 SUPERFAMILY SSF46785 8 114 7.06E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_004083 600a4cc1c87853f9d83af028cd662125 314 Gene3D G3DSA:3.40.190.10 94 293 9.7E-59 T 13-10-2018 VEA_004083 600a4cc1c87853f9d83af028cd662125 314 Gene3D G3DSA:1.10.10.10 5 92 4.1E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_004083 600a4cc1c87853f9d83af028cd662125 314 SUPERFAMILY SSF53850 90 299 1.01E-46 T 13-10-2018 VEA_004083 600a4cc1c87853f9d83af028cd662125 314 Pfam PF03466 LysR substrate binding domain 90 295 6.9E-44 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_004083 600a4cc1c87853f9d83af028cd662125 314 Gene3D G3DSA:3.40.190.10 165 267 9.7E-59 T 13-10-2018 VEA_004083 600a4cc1c87853f9d83af028cd662125 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 5.5E-19 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_002520 be1cf625e5a40b67ee8000dfe03d4f78 155 Gene3D G3DSA:1.10.10.10 104 151 7.2E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_002520 be1cf625e5a40b67ee8000dfe03d4f78 155 Gene3D G3DSA:1.10.10.10 10 50 1.2E-8 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_002520 be1cf625e5a40b67ee8000dfe03d4f78 155 Gene3D G3DSA:1.10.10.10 58 101 6.1E-15 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_002520 be1cf625e5a40b67ee8000dfe03d4f78 155 Hamap MF_01114 Regulatory protein RecX [recX]. 7 155 13.628 T 13-10-2018 IPR003783 Regulatory protein RecX GO:0006282 VEA_002520 be1cf625e5a40b67ee8000dfe03d4f78 155 Pfam PF02631 RecX family 34 150 1.5E-29 T 13-10-2018 IPR003783 Regulatory protein RecX GO:0006282 VEA_001560 60b7ddc7594ded51a6b6825bad0a3dcc 461 SUPERFAMILY SSF55103 175 452 2.83E-5 T 13-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 VEA_001560 60b7ddc7594ded51a6b6825bad0a3dcc 461 Pfam PF08031 Berberine and berberine like 415 459 7.4E-16 T 13-10-2018 IPR012951 Berberine/berberine-like GO:0016491|GO:0050660|GO:0055114 VEA_001560 60b7ddc7594ded51a6b6825bad0a3dcc 461 Gene3D G3DSA:3.40.462.20 209 420 4.7E-121 T 13-10-2018 VEA_001560 60b7ddc7594ded51a6b6825bad0a3dcc 461 Gene3D G3DSA:3.30.43.10 18 96 6.5E-30 T 13-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 VEA_001560 60b7ddc7594ded51a6b6825bad0a3dcc 461 SUPERFAMILY SSF56176 16 209 1.4E-59 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VEA_001560 60b7ddc7594ded51a6b6825bad0a3dcc 461 Gene3D G3DSA:3.30.465.10 109 447 4.7E-121 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 VEA_001560 60b7ddc7594ded51a6b6825bad0a3dcc 461 ProSitePatterns PS00862 Oxygen oxidoreductases covalent FAD-binding site. 43 76 - T 13-10-2018 IPR006093 Oxygen oxidoreductase covalent FAD-binding site GO:0016491|GO:0055114 VEA_001560 60b7ddc7594ded51a6b6825bad0a3dcc 461 Pfam PF01565 FAD binding domain 43 175 1.1E-32 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 VEA_004196 baac15d4fa0b16b33f3d6e88b3000cd4 385 Pfam PF01479 S4 domain 8 52 5.3E-11 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_004196 baac15d4fa0b16b33f3d6e88b3000cd4 385 Gene3D G3DSA:3.30.70.1560 132 205 9.7E-54 T 13-10-2018 VEA_004196 baac15d4fa0b16b33f3d6e88b3000cd4 385 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 71 224 8.5E-48 T 13-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VEA_004196 baac15d4fa0b16b33f3d6e88b3000cd4 385 SUPERFAMILY SSF55174 7 97 2.02E-14 T 13-10-2018 VEA_004196 baac15d4fa0b16b33f3d6e88b3000cd4 385 Gene3D G3DSA:3.30.70.580 68 227 9.7E-54 T 13-10-2018 VEA_004196 baac15d4fa0b16b33f3d6e88b3000cd4 385 Gene3D G3DSA:3.10.290.10 1 61 1.1E-22 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VEA_004196 baac15d4fa0b16b33f3d6e88b3000cd4 385 SUPERFAMILY SSF55120 66 227 1.09E-37 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEA_004196 baac15d4fa0b16b33f3d6e88b3000cd4 385 Pfam PF00849 RNA pseudouridylate synthase 67 193 5.8E-14 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEA_004196 baac15d4fa0b16b33f3d6e88b3000cd4 385 SMART SM00363 7 65 1.7E-11 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_004196 baac15d4fa0b16b33f3d6e88b3000cd4 385 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 102 116 - T 13-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VEA_003885 7bb40d863eb6ca805cb103851cb5637b 256 Gene3D G3DSA:1.20.1260.10 7 76 1.2E-16 T 13-10-2018 IPR012347 Ferritin-like VEA_003885 7bb40d863eb6ca805cb103851cb5637b 256 Gene3D G3DSA:1.20.1260.10 95 256 1.8E-55 T 13-10-2018 IPR012347 Ferritin-like VEA_003885 7bb40d863eb6ca805cb103851cb5637b 256 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 10 252 9.6E-120 T 13-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 VEA_003885 7bb40d863eb6ca805cb103851cb5637b 256 SUPERFAMILY SSF47240 11 255 6.87E-75 T 13-10-2018 IPR009078 Ferritin-like superfamily VEA_003885 7bb40d863eb6ca805cb103851cb5637b 256 PIRSF PIRSF020736 2 256 1.3E-92 T 13-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 VEA_003052 c4522c15260d5bb0ccaf336de52dbbf9 305 Pfam PF07968 Leukocidin/Hemolysin toxin family 105 300 1.5E-14 T 13-10-2018 IPR016183 Leukocidin/Hemolysin toxin GO:0005576|GO:0051715 VEA_003052 c4522c15260d5bb0ccaf336de52dbbf9 305 Gene3D G3DSA:2.70.240.10 72 302 1.4E-20 T 13-10-2018 VEA_003052 c4522c15260d5bb0ccaf336de52dbbf9 305 SUPERFAMILY SSF56959 91 283 5.07E-19 T 13-10-2018 IPR036435 Leukocidin/porin MspA superfamily VEA_001876 348fffa2269724ab59ddce40401ad478 261 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 11 260 45.709 T 13-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 VEA_001876 348fffa2269724ab59ddce40401ad478 261 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 17 259 4.6E-103 T 13-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 VEA_001876 348fffa2269724ab59ddce40401ad478 261 SUPERFAMILY SSF53474 9 258 7.63E-52 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_001876 348fffa2269724ab59ddce40401ad478 261 Gene3D G3DSA:3.40.50.1820 6 260 4.7E-68 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_001876 348fffa2269724ab59ddce40401ad478 261 Pfam PF00561 alpha/beta hydrolase fold 22 247 7.3E-25 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEA_003565 8cef445067be8e8b6a1f0dabbcb57895 591 SUPERFAMILY SSF90123 8 322 7.98E-71 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEA_003565 8cef445067be8e8b6a1f0dabbcb57895 591 SMART SM00382 362 547 3.3E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_003565 8cef445067be8e8b6a1f0dabbcb57895 591 Gene3D G3DSA:3.40.50.300 329 588 4.0E-82 T 13-10-2018 VEA_003565 8cef445067be8e8b6a1f0dabbcb57895 591 SUPERFAMILY SSF52540 331 571 3.02E-78 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003565 8cef445067be8e8b6a1f0dabbcb57895 591 Gene3D G3DSA:1.20.1560.10 1 324 7.7E-75 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEA_003565 8cef445067be8e8b6a1f0dabbcb57895 591 Pfam PF00005 ABC transporter 353 501 3.3E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_003565 8cef445067be8e8b6a1f0dabbcb57895 591 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_003565 8cef445067be8e8b6a1f0dabbcb57895 591 Pfam PF00664 ABC transporter transmembrane region 22 290 1.6E-43 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VEA_001979 2286bbc4b61179d5b5a87a5c7cfe510a 193 Gene3D G3DSA:1.10.357.10 1 193 6.6E-76 T 13-10-2018 VEA_001979 2286bbc4b61179d5b5a87a5c7cfe510a 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 3.2E-17 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEA_001979 2286bbc4b61179d5b5a87a5c7cfe510a 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 8.3E-11 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEA_001979 2286bbc4b61179d5b5a87a5c7cfe510a 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 8.3E-11 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEA_001979 2286bbc4b61179d5b5a87a5c7cfe510a 193 SUPERFAMILY SSF46689 6 80 1.75E-17 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_001979 2286bbc4b61179d5b5a87a5c7cfe510a 193 Pfam PF16295 Tetracycline repressor, C-terminal all-alpha domain 65 190 2.3E-7 T 13-10-2018 IPR032551 HTH-type transcriptional repressor, C-terminal VEA_001979 2286bbc4b61179d5b5a87a5c7cfe510a 193 ProSitePatterns PS01081 TetR-type HTH domain signature. 25 56 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VEA_000417 3bec9b4c87cf0685a9f9cc22d9486683 117 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 5 111 2.3E-29 T 13-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like VEA_003411 66362b991488fac257a7cc095e1fa296 109 Pfam PF04358 DsrC like protein 4 109 1.3E-43 T 13-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE VEA_003411 66362b991488fac257a7cc095e1fa296 109 PIRSF PIRSF006223 2 109 5.0E-41 T 13-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE VEA_003411 66362b991488fac257a7cc095e1fa296 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 4 109 3.6E-49 T 13-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE VEA_003411 66362b991488fac257a7cc095e1fa296 109 Gene3D G3DSA:1.10.10.370 39 109 9.9E-31 T 13-10-2018 VEA_003411 66362b991488fac257a7cc095e1fa296 109 SUPERFAMILY SSF69721 2 109 6.67E-41 T 13-10-2018 IPR025526 DsrC-like domain superfamily VEA_003411 66362b991488fac257a7cc095e1fa296 109 Gene3D G3DSA:3.30.1420.10 2 38 6.8E-12 T 13-10-2018 VEA_001746 703e90bfdaf5fd84674d39d47662a979 335 SMART SM00354 1 71 2.4E-31 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEA_001746 703e90bfdaf5fd84674d39d47662a979 335 SUPERFAMILY SSF53822 60 332 6.87E-89 T 13-10-2018 IPR028082 Periplasmic binding protein-like I VEA_001746 703e90bfdaf5fd84674d39d47662a979 335 Gene3D G3DSA:3.40.50.2300 160 289 1.7E-80 T 13-10-2018 VEA_001746 703e90bfdaf5fd84674d39d47662a979 335 Gene3D G3DSA:1.10.260.40 1 55 5.7E-26 T 13-10-2018 VEA_001746 703e90bfdaf5fd84674d39d47662a979 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 8.0E-20 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEA_001746 703e90bfdaf5fd84674d39d47662a979 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 13-10-2018 VEA_001746 703e90bfdaf5fd84674d39d47662a979 335 Gene3D G3DSA:3.40.50.2300 56 306 1.7E-80 T 13-10-2018 VEA_001746 703e90bfdaf5fd84674d39d47662a979 335 SUPERFAMILY SSF47413 1 59 3.47E-17 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEA_001746 703e90bfdaf5fd84674d39d47662a979 335 Pfam PF13377 Periplasmic binding protein-like domain 168 328 4.7E-40 T 13-10-2018 VEA_000436 233c5c5485baca775017bfc79e2c2bbf 150 SMART SM00344 10 116 6.9E-26 T 13-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VEA_000436 233c5c5485baca775017bfc79e2c2bbf 150 SUPERFAMILY SSF46785 10 67 7.52E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000436 233c5c5485baca775017bfc79e2c2bbf 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 37 56 1.6E-15 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEA_000436 233c5c5485baca775017bfc79e2c2bbf 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 26 37 1.6E-15 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEA_000436 233c5c5485baca775017bfc79e2c2bbf 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 10 26 1.6E-15 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEA_000436 233c5c5485baca775017bfc79e2c2bbf 150 Pfam PF01037 Lrp/AsnC ligand binding domain 77 145 1.8E-12 T 13-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VEA_000436 233c5c5485baca775017bfc79e2c2bbf 150 Pfam PF13404 AsnC-type helix-turn-helix domain 10 51 3.9E-14 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEA_000436 233c5c5485baca775017bfc79e2c2bbf 150 ProSitePatterns PS00519 AsnC-type HTH domain signature. 28 54 - T 13-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VEA_000436 233c5c5485baca775017bfc79e2c2bbf 150 SUPERFAMILY SSF54909 75 149 3.89E-12 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel VEA_000436 233c5c5485baca775017bfc79e2c2bbf 150 Gene3D G3DSA:3.30.70.920 74 146 4.6E-15 T 13-10-2018 VEA_000436 233c5c5485baca775017bfc79e2c2bbf 150 Gene3D G3DSA:1.10.10.10 3 63 7.4E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_003784 f0e80e828aa6b169fc1e7499376c0d5c 219 Gene3D G3DSA:1.10.10.10 123 219 1.3E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_003784 f0e80e828aa6b169fc1e7499376c0d5c 219 Gene3D G3DSA:3.40.50.2300 1 122 1.2E-36 T 13-10-2018 VEA_003784 f0e80e828aa6b169fc1e7499376c0d5c 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 4.2E-22 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEA_003784 f0e80e828aa6b169fc1e7499376c0d5c 219 SMART SM00862 145 216 4.2E-23 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEA_003784 f0e80e828aa6b169fc1e7499376c0d5c 219 Pfam PF00072 Response regulator receiver domain 3 113 4.4E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_003784 f0e80e828aa6b169fc1e7499376c0d5c 219 SUPERFAMILY SSF52172 1 133 1.71E-36 T 13-10-2018 IPR011006 CheY-like superfamily VEA_003784 f0e80e828aa6b169fc1e7499376c0d5c 219 SUPERFAMILY SSF46894 119 217 7.65E-27 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEA_003784 f0e80e828aa6b169fc1e7499376c0d5c 219 SMART SM00448 1 112 9.6E-35 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_000955 22559e865732d50a6212e2411b0fb15f 455 Pfam PF12833 Helix-turn-helix domain 112 190 9.3E-22 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_000955 22559e865732d50a6212e2411b0fb15f 455 Gene3D G3DSA:1.10.340.30 313 413 1.5E-18 T 13-10-2018 VEA_000955 22559e865732d50a6212e2411b0fb15f 455 SUPERFAMILY SSF48150 304 452 6.28E-29 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 VEA_000955 22559e865732d50a6212e2411b0fb15f 455 Pfam PF02805 Metal binding domain of Ada 14 77 4.5E-30 T 13-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 VEA_000955 22559e865732d50a6212e2411b0fb15f 455 SUPERFAMILY SSF55945 201 293 7.22E-26 T 13-10-2018 VEA_000955 22559e865732d50a6212e2411b0fb15f 455 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 143 185 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VEA_000955 22559e865732d50a6212e2411b0fb15f 455 SMART SM00342 106 189 4.9E-23 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_000955 22559e865732d50a6212e2411b0fb15f 455 Gene3D G3DSA:1.10.1670.10 415 455 4.1E-6 T 13-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 VEA_000955 22559e865732d50a6212e2411b0fb15f 455 SMART SM01009 200 312 2.0E-30 T 13-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal VEA_000955 22559e865732d50a6212e2411b0fb15f 455 SUPERFAMILY SSF46689 144 191 5.38E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_000955 22559e865732d50a6212e2411b0fb15f 455 Gene3D G3DSA:3.30.310.20 200 312 4.0E-24 T 13-10-2018 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily VEA_000955 22559e865732d50a6212e2411b0fb15f 455 SUPERFAMILY SSF46689 92 139 7.69E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_000955 22559e865732d50a6212e2411b0fb15f 455 Gene3D G3DSA:3.40.10.10 4 79 6.0E-30 T 13-10-2018 IPR035451 Ada-like domain superfamily VEA_000955 22559e865732d50a6212e2411b0fb15f 455 Pfam PF06029 AlkA N-terminal domain 201 312 2.7E-33 T 13-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal VEA_000955 22559e865732d50a6212e2411b0fb15f 455 SUPERFAMILY SSF57884 7 91 1.14E-34 T 13-10-2018 IPR035451 Ada-like domain superfamily VEA_000955 22559e865732d50a6212e2411b0fb15f 455 Gene3D G3DSA:1.10.10.60 86 194 2.9E-25 T 13-10-2018 VEA_002972 dbf4548b0dfc6911002b8b09713dd530 264 SMART SM00382 31 226 9.1E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_002972 dbf4548b0dfc6911002b8b09713dd530 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_002972 dbf4548b0dfc6911002b8b09713dd530 264 SUPERFAMILY SSF52540 2 231 2.21E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002972 dbf4548b0dfc6911002b8b09713dd530 264 Pfam PF00005 ABC transporter 22 177 4.9E-25 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_002972 dbf4548b0dfc6911002b8b09713dd530 264 Gene3D G3DSA:3.40.50.300 1 255 1.4E-53 T 13-10-2018 VEA_000611 47b21a9db9039b61a11efdaf45af7c6a 289 Gene3D G3DSA:1.10.10.60 1 56 6.8E-16 T 13-10-2018 VEA_000611 47b21a9db9039b61a11efdaf45af7c6a 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 60 103 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VEA_000611 47b21a9db9039b61a11efdaf45af7c6a 289 Gene3D G3DSA:3.20.80.10 138 287 7.5E-27 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VEA_000611 47b21a9db9039b61a11efdaf45af7c6a 289 SMART SM00871 137 287 2.2E-17 T 13-10-2018 IPR010499 Bacterial transcription activator, effector binding VEA_000611 47b21a9db9039b61a11efdaf45af7c6a 289 Gene3D G3DSA:1.10.10.60 57 112 2.5E-17 T 13-10-2018 VEA_000611 47b21a9db9039b61a11efdaf45af7c6a 289 Pfam PF06445 GyrI-like small molecule binding domain 138 286 5.6E-27 T 13-10-2018 IPR029442 GyrI-like small molecule binding domain VEA_000611 47b21a9db9039b61a11efdaf45af7c6a 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 76 91 3.6E-6 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEA_000611 47b21a9db9039b61a11efdaf45af7c6a 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 91 107 3.6E-6 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEA_000611 47b21a9db9039b61a11efdaf45af7c6a 289 Pfam PF12833 Helix-turn-helix domain 29 108 1.5E-25 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_000611 47b21a9db9039b61a11efdaf45af7c6a 289 SUPERFAMILY SSF46689 60 110 1.66E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_000611 47b21a9db9039b61a11efdaf45af7c6a 289 SUPERFAMILY SSF55136 138 286 4.58E-26 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VEA_000611 47b21a9db9039b61a11efdaf45af7c6a 289 SUPERFAMILY SSF46689 7 57 4.93E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_000611 47b21a9db9039b61a11efdaf45af7c6a 289 SMART SM00342 23 107 6.0E-31 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_004029 f0da0a63cea026e3e54578e363c64ded 329 SUPERFAMILY SSF51604 106 321 3.67E-46 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VEA_004029 f0da0a63cea026e3e54578e363c64ded 329 Gene3D G3DSA:3.20.20.120 99 300 6.7E-115 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VEA_004029 f0da0a63cea026e3e54578e363c64ded 329 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 326 20.962 T 13-10-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 VEA_004029 f0da0a63cea026e3e54578e363c64ded 329 Gene3D G3DSA:3.30.390.10 4 306 6.7E-115 T 13-10-2018 IPR029017 Enolase-like, N-terminal VEA_004029 f0da0a63cea026e3e54578e363c64ded 329 Pfam PF13378 Enolase C-terminal domain-like 125 277 2.1E-11 T 13-10-2018 IPR029065 Enolase C-terminal domain-like VEA_004029 f0da0a63cea026e3e54578e363c64ded 329 SMART SM00922 116 213 4.9E-6 T 13-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal VEA_004029 f0da0a63cea026e3e54578e363c64ded 329 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 311 6.1E-107 T 13-10-2018 VEA_004029 f0da0a63cea026e3e54578e363c64ded 329 SUPERFAMILY SSF54826 1 100 6.18E-25 T 13-10-2018 VEA_004183 8d739871ad562ec6259930fe50513542 320 SUPERFAMILY SSF103088 183 311 1.96E-38 T 13-10-2018 IPR036737 OmpA-like domain superfamily VEA_004183 8d739871ad562ec6259930fe50513542 320 SUPERFAMILY SSF56925 18 171 6.02E-29 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VEA_004183 8d739871ad562ec6259930fe50513542 320 Pfam PF01389 OmpA-like transmembrane domain 18 170 2.3E-33 T 13-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 VEA_004183 8d739871ad562ec6259930fe50513542 320 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 256 273 2.3E-5 T 13-10-2018 VEA_004183 8d739871ad562ec6259930fe50513542 320 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 294 314 2.3E-5 T 13-10-2018 VEA_004183 8d739871ad562ec6259930fe50513542 320 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 274 293 2.3E-5 T 13-10-2018 VEA_004183 8d739871ad562ec6259930fe50513542 320 PRINTS PR01021 OMPA domain signature 256 272 2.5E-16 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEA_004183 8d739871ad562ec6259930fe50513542 320 PRINTS PR01021 OMPA domain signature 211 233 2.5E-16 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEA_004183 8d739871ad562ec6259930fe50513542 320 PRINTS PR01021 OMPA domain signature 241 256 2.5E-16 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEA_004183 8d739871ad562ec6259930fe50513542 320 Pfam PF00691 OmpA family 211 305 1.3E-24 T 13-10-2018 IPR006665 OmpA-like domain VEA_004183 8d739871ad562ec6259930fe50513542 320 Gene3D G3DSA:3.30.1330.60 185 318 4.9E-44 T 13-10-2018 IPR036737 OmpA-like domain superfamily VEA_004183 8d739871ad562ec6259930fe50513542 320 Gene3D G3DSA:2.40.160.20 5 184 5.6E-39 T 13-10-2018 VEA_003473 cbe8175b0043550eda62510e103c9c66 54 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 5.4E-21 T 13-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type VEA_003473 cbe8175b0043550eda62510e103c9c66 54 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 51 4.5E-18 T 13-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type VEA_003167 1846c9c215f326e2944029d2349b815d 195 Pfam PF13023 HD domain 15 171 7.1E-52 T 13-10-2018 IPR006674 HD domain VEA_003167 1846c9c215f326e2944029d2349b815d 195 Gene3D G3DSA:1.10.3210.10 1 195 3.9E-52 T 13-10-2018 VEA_003167 1846c9c215f326e2944029d2349b815d 195 SUPERFAMILY SSF109604 4 184 1.37E-43 T 13-10-2018 VEA_004281 8c71ff185056b1d5989f11c541fbd656 525 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 8 484 48.66 T 13-10-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 VEA_004281 8c71ff185056b1d5989f11c541fbd656 525 Pfam PF01464 Transglycosylase SLT domain 314 417 3.1E-20 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 VEA_004281 8c71ff185056b1d5989f11c541fbd656 525 Gene3D G3DSA:3.40.190.10 128 240 3.9E-72 T 13-10-2018 VEA_004281 8c71ff185056b1d5989f11c541fbd656 525 Gene3D G3DSA:1.10.530.10 305 466 1.9E-33 T 13-10-2018 VEA_004281 8c71ff185056b1d5989f11c541fbd656 525 SUPERFAMILY SSF53955 261 466 1.88E-35 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily VEA_004281 8c71ff185056b1d5989f11c541fbd656 525 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 283 1.2E-28 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEA_004281 8c71ff185056b1d5989f11c541fbd656 525 Gene3D G3DSA:3.40.190.10 37 279 3.9E-72 T 13-10-2018 VEA_004281 8c71ff185056b1d5989f11c541fbd656 525 SUPERFAMILY SSF53850 44 283 1.48E-32 T 13-10-2018 VEA_004281 8c71ff185056b1d5989f11c541fbd656 525 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 325 353 - T 13-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VEA_004281 8c71ff185056b1d5989f11c541fbd656 525 SMART SM00062 43 284 2.0E-26 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEA_000163 82f47e947f5e2c2e841bfd9039b29a47 227 Gene3D G3DSA:2.40.100.10 91 226 4.6E-45 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily VEA_000163 82f47e947f5e2c2e841bfd9039b29a47 227 SMART SM00796 6 203 3.2E-62 T 13-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D VEA_000163 82f47e947f5e2c2e841bfd9039b29a47 227 SUPERFAMILY SSF160467 8 97 2.75E-11 T 13-10-2018 VEA_000163 82f47e947f5e2c2e841bfd9039b29a47 227 Gene3D G3DSA:3.30.1360.40 7 80 3.1E-9 T 13-10-2018 VEA_000163 82f47e947f5e2c2e841bfd9039b29a47 227 SUPERFAMILY SSF50891 93 220 1.9E-35 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily VEA_000163 82f47e947f5e2c2e841bfd9039b29a47 227 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 8 197 8.4E-55 T 13-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D VEA_001177 f8148ade87cf66713800ea0e15bb7c61 375 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 352 5.7E-118 T 13-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 VEA_001177 f8148ade87cf66713800ea0e15bb7c61 375 SUPERFAMILY SSF160544 244 351 9.55E-36 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal VEA_001177 f8148ade87cf66713800ea0e15bb7c61 375 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 4.0E-118 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VEA_001177 f8148ade87cf66713800ea0e15bb7c61 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 6.8E-37 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VEA_001177 f8148ade87cf66713800ea0e15bb7c61 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 6.8E-37 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VEA_001177 f8148ade87cf66713800ea0e15bb7c61 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 6.8E-37 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VEA_001177 f8148ade87cf66713800ea0e15bb7c61 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 6.8E-37 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VEA_001177 f8148ade87cf66713800ea0e15bb7c61 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 6.8E-37 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VEA_001177 f8148ade87cf66713800ea0e15bb7c61 375 Gene3D G3DSA:3.40.1690.10 217 358 4.4E-52 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal VEA_001130 ea84f3729333ae6f8a27d69d4cc4578f 431 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 139 153 2.5E-8 T 13-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 VEA_001130 ea84f3729333ae6f8a27d69d4cc4578f 431 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 52 60 2.5E-8 T 13-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 VEA_001130 ea84f3729333ae6f8a27d69d4cc4578f 431 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 82 93 2.5E-8 T 13-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 VEA_001130 ea84f3729333ae6f8a27d69d4cc4578f 431 SUPERFAMILY SSF53474 41 419 7.17E-34 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_001130 ea84f3729333ae6f8a27d69d4cc4578f 431 Pfam PF00561 alpha/beta hydrolase fold 50 231 3.4E-21 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEA_003662 979ac70dfe16866d407a91b6fc4a0162 598 Gene3D G3DSA:3.40.350.10 1 151 1.1E-43 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VEA_003662 979ac70dfe16866d407a91b6fc4a0162 598 Gene3D G3DSA:3.40.350.10 152 302 2.8E-36 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VEA_003662 979ac70dfe16866d407a91b6fc4a0162 598 Gene3D G3DSA:3.90.230.10 305 596 3.7E-92 T 13-10-2018 VEA_003662 979ac70dfe16866d407a91b6fc4a0162 598 SUPERFAMILY SSF55920 308 562 6.8E-50 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like VEA_003662 979ac70dfe16866d407a91b6fc4a0162 598 Pfam PF16188 C-terminal region of peptidase_M24 537 594 2.9E-20 T 13-10-2018 IPR032416 Peptidase M24, C-terminal domain VEA_003662 979ac70dfe16866d407a91b6fc4a0162 598 Pfam PF16189 Creatinase/Prolidase N-terminal domain 153 311 3.0E-40 T 13-10-2018 VEA_003662 979ac70dfe16866d407a91b6fc4a0162 598 SUPERFAMILY SSF53092 14 141 3.84E-12 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VEA_003662 979ac70dfe16866d407a91b6fc4a0162 598 Pfam PF00557 Metallopeptidase family M24 323 526 3.9E-42 T 13-10-2018 IPR000994 Peptidase M24 VEA_003662 979ac70dfe16866d407a91b6fc4a0162 598 Pfam PF01321 Creatinase/Prolidase N-terminal domain 10 137 5.3E-17 T 13-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 VEA_001414 5cf8f612ec71f59bb74964d10bd3a169 423 SUPERFAMILY SSF51735 159 338 6.28E-14 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_001414 5cf8f612ec71f59bb74964d10bd3a169 423 Pfam PF00107 Zinc-binding dehydrogenase 190 328 2.2E-10 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VEA_001414 5cf8f612ec71f59bb74964d10bd3a169 423 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 99 4.5E-6 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VEA_001414 5cf8f612ec71f59bb74964d10bd3a169 423 Gene3D G3DSA:3.90.180.10 16 351 2.5E-35 T 13-10-2018 VEA_001414 5cf8f612ec71f59bb74964d10bd3a169 423 Gene3D G3DSA:3.40.50.720 159 320 2.5E-35 T 13-10-2018 VEA_001414 5cf8f612ec71f59bb74964d10bd3a169 423 SUPERFAMILY SSF50129 4 189 6.09E-21 T 13-10-2018 IPR011032 GroES-like superfamily VEA_002350 441fb71e9d6bebc35db7a7d45a99b0ff 623 PIRSF PIRSF000207 20 623 2.4E-276 T 13-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEA_002350 441fb71e9d6bebc35db7a7d45a99b0ff 623 SUPERFAMILY SSF52218 86 233 1.41E-45 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VEA_002350 441fb71e9d6bebc35db7a7d45a99b0ff 623 Pfam PF00175 Oxidoreductase NAD-binding domain 481 587 8.8E-19 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VEA_002350 441fb71e9d6bebc35db7a7d45a99b0ff 623 Gene3D G3DSA:3.40.50.80 469 623 4.6E-60 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VEA_002350 441fb71e9d6bebc35db7a7d45a99b0ff 623 Pfam PF00667 FAD binding domain 254 448 2.6E-30 T 13-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 VEA_002350 441fb71e9d6bebc35db7a7d45a99b0ff 623 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 19 623 48.909 T 13-10-2018 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEA_002350 441fb71e9d6bebc35db7a7d45a99b0ff 623 Pfam PF00258 Flavodoxin 89 213 2.6E-28 T 13-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VEA_002350 441fb71e9d6bebc35db7a7d45a99b0ff 623 Gene3D G3DSA:2.40.30.10 257 463 1.8E-72 T 13-10-2018 VEA_002350 441fb71e9d6bebc35db7a7d45a99b0ff 623 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 27 623 3.9E-256 T 13-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEA_002350 441fb71e9d6bebc35db7a7d45a99b0ff 623 Gene3D G3DSA:3.40.50.360 77 240 1.8E-45 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VEA_002350 441fb71e9d6bebc35db7a7d45a99b0ff 623 Gene3D G3DSA:1.20.990.10 304 408 1.8E-72 T 13-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 VEA_002350 441fb71e9d6bebc35db7a7d45a99b0ff 623 PRINTS PR00369 Flavodoxin signature 168 178 5.1E-9 T 13-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VEA_002350 441fb71e9d6bebc35db7a7d45a99b0ff 623 PRINTS PR00369 Flavodoxin signature 192 211 5.1E-9 T 13-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VEA_002350 441fb71e9d6bebc35db7a7d45a99b0ff 623 PRINTS PR00369 Flavodoxin signature 88 101 5.1E-9 T 13-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VEA_002350 441fb71e9d6bebc35db7a7d45a99b0ff 623 PRINTS PR00369 Flavodoxin signature 136 147 5.1E-9 T 13-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VEA_002350 441fb71e9d6bebc35db7a7d45a99b0ff 623 SUPERFAMILY SSF52343 468 623 7.86E-51 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VEA_002350 441fb71e9d6bebc35db7a7d45a99b0ff 623 SUPERFAMILY SSF63380 252 469 3.58E-64 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VEA_002350 441fb71e9d6bebc35db7a7d45a99b0ff 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 410 417 1.9E-29 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEA_002350 441fb71e9d6bebc35db7a7d45a99b0ff 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 505 514 1.9E-29 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEA_002350 441fb71e9d6bebc35db7a7d45a99b0ff 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 443 452 1.9E-29 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEA_002350 441fb71e9d6bebc35db7a7d45a99b0ff 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 294 304 1.9E-29 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEA_002350 441fb71e9d6bebc35db7a7d45a99b0ff 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 572 580 1.9E-29 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEA_002350 441fb71e9d6bebc35db7a7d45a99b0ff 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 480 499 1.9E-29 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEA_002350 441fb71e9d6bebc35db7a7d45a99b0ff 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 518 529 1.9E-29 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEA_002350 441fb71e9d6bebc35db7a7d45a99b0ff 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 549 565 1.9E-29 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEA_000982 e7cdd086a767d2e275b8637bdec3ae89 227 SUPERFAMILY SSF75625 2 226 1.09E-72 T 13-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_000982 e7cdd086a767d2e275b8637bdec3ae89 227 Gene3D G3DSA:3.30.70.980 72 224 4.7E-44 T 13-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_000982 e7cdd086a767d2e275b8637bdec3ae89 227 Gene3D G3DSA:3.30.70.980 120 191 4.7E-44 T 13-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_000982 e7cdd086a767d2e275b8637bdec3ae89 227 Gene3D G3DSA:1.10.10.200 6 67 1.9E-17 T 13-10-2018 IPR017856 Integrase-like, N-terminal VEA_000982 e7cdd086a767d2e275b8637bdec3ae89 227 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 227 24.692 T 13-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_000982 e7cdd086a767d2e275b8637bdec3ae89 227 Pfam PF01709 Transcriptional regulator 2 225 2.1E-69 T 13-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001053 908295fd2135d9c67827215fd3cb929d 333 SUPERFAMILY SSF53448 1 253 6.49E-35 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEA_001053 908295fd2135d9c67827215fd3cb929d 333 Gene3D G3DSA:3.90.550.10 1 234 1.2E-43 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEA_001053 908295fd2135d9c67827215fd3cb929d 333 Pfam PF00535 Glycosyl transferase family 2 6 167 1.9E-21 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VEA_003910 9628c968b30772f0369d45787ad1880c 353 SUPERFAMILY SSF142754 28 341 1.83E-106 T 13-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 VEA_003910 9628c968b30772f0369d45787ad1880c 353 Gene3D G3DSA:3.40.50.10800 200 295 6.8E-94 T 13-10-2018 VEA_003910 9628c968b30772f0369d45787ad1880c 353 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 66.78 T 13-10-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 VEA_003910 9628c968b30772f0369d45787ad1880c 353 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 29 341 9.3E-115 T 13-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 VEA_003910 9628c968b30772f0369d45787ad1880c 353 Gene3D G3DSA:3.40.50.10800 115 340 6.8E-94 T 13-10-2018 VEA_003910 9628c968b30772f0369d45787ad1880c 353 Pfam PF02445 Quinolinate synthetase A protein 31 340 3.5E-102 T 13-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 VEA_003910 9628c968b30772f0369d45787ad1880c 353 Gene3D G3DSA:3.40.50.10800 31 322 6.8E-94 T 13-10-2018 VEA_002933 1558f34c1d48f4ec96b25dbf93448568 167 Pfam PF11993 Ribosomal S4P (gammaproteobacterial) 1 164 1.8E-63 T 13-10-2018 IPR021879 Ribosomal S4P (gammaproteobacterial) VEA_004017 731c63f9d692e30daa8716c73c3aed55 364 SUPERFAMILY SSF53686 23 336 1.7E-71 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VEA_004017 731c63f9d692e30daa8716c73c3aed55 364 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 31 316 1.3E-42 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VEA_004017 731c63f9d692e30daa8716c73c3aed55 364 Gene3D G3DSA:3.40.50.1100 51 157 1.4E-68 T 13-10-2018 VEA_004017 731c63f9d692e30daa8716c73c3aed55 364 Gene3D G3DSA:3.40.50.1100 25 324 1.4E-68 T 13-10-2018 VEA_001462 01fdb5f0123a13072c276e1f71aa365d 451 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 279 434 2.3E-34 T 13-10-2018 IPR000160 GGDEF domain VEA_001462 01fdb5f0123a13072c276e1f71aa365d 451 Pfam PF00990 Diguanylate cyclase, GGDEF domain 282 432 1.6E-35 T 13-10-2018 IPR000160 GGDEF domain VEA_001462 01fdb5f0123a13072c276e1f71aa365d 451 Gene3D G3DSA:3.30.70.270 271 437 4.1E-43 T 13-10-2018 VEA_001462 01fdb5f0123a13072c276e1f71aa365d 451 SUPERFAMILY SSF53850 12 229 1.18E-33 T 13-10-2018 VEA_001462 01fdb5f0123a13072c276e1f71aa365d 451 Gene3D G3DSA:3.40.190.10 10 229 2.5E-30 T 13-10-2018 VEA_001462 01fdb5f0123a13072c276e1f71aa365d 451 Gene3D G3DSA:3.40.190.10 96 192 2.5E-30 T 13-10-2018 VEA_001462 01fdb5f0123a13072c276e1f71aa365d 451 SMART SM00062 11 233 1.2E-9 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEA_001462 01fdb5f0123a13072c276e1f71aa365d 451 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 12 229 2.8E-26 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEA_001462 01fdb5f0123a13072c276e1f71aa365d 451 SMART SM00267 270 436 2.2E-48 T 13-10-2018 IPR000160 GGDEF domain VEA_001462 01fdb5f0123a13072c276e1f71aa365d 451 SUPERFAMILY SSF55073 286 435 2.04E-38 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_002457 81edae9f43d2b15ba493042756d3115f 233 SUPERFAMILY SSF51419 1 228 1.31E-81 T 13-10-2018 IPR029066 PLP-binding barrel VEA_002457 81edae9f43d2b15ba493042756d3115f 233 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 229 34.473 T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 VEA_002457 81edae9f43d2b15ba493042756d3115f 233 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 80 94 - T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 VEA_002457 81edae9f43d2b15ba493042756d3115f 233 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 230 3.6E-87 T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 VEA_002457 81edae9f43d2b15ba493042756d3115f 233 PIRSF PIRSF004848 1 233 5.9E-77 T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 VEA_002457 81edae9f43d2b15ba493042756d3115f 233 Pfam PF01168 Alanine racemase, N-terminal domain 9 230 5.3E-36 T 13-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEA_002457 81edae9f43d2b15ba493042756d3115f 233 Gene3D G3DSA:3.20.20.10 1 233 3.2E-87 T 13-10-2018 IPR029066 PLP-binding barrel VEA_001701 96fada6933fc112c842f7fea8083426a 419 Pfam PF12704 MacB-like periplasmic core domain 20 207 1.7E-10 T 13-10-2018 IPR025857 MacB-like periplasmic core domain VEA_001701 96fada6933fc112c842f7fea8083426a 419 Pfam PF02687 FtsX-like permease family 317 410 3.8E-12 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VEA_001768 b1cd4ba615f7f23d2353f5a37d8fb9bb 383 Gene3D G3DSA:3.40.50.2000 22 363 2.3E-48 T 13-10-2018 VEA_001768 b1cd4ba615f7f23d2353f5a37d8fb9bb 383 Pfam PF00534 Glycosyl transferases group 1 192 343 1.2E-26 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 VEA_001768 b1cd4ba615f7f23d2353f5a37d8fb9bb 383 Gene3D G3DSA:3.40.50.2000 179 354 2.3E-48 T 13-10-2018 VEA_001768 b1cd4ba615f7f23d2353f5a37d8fb9bb 383 Pfam PF13477 Glycosyl transferase 4-like 4 153 1.0E-12 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 VEA_001768 b1cd4ba615f7f23d2353f5a37d8fb9bb 383 SUPERFAMILY SSF53756 21 366 1.99E-61 T 13-10-2018 VEA_003846 9d2c7fac5f19961aecd8062b4d9e4a1f 357 SUPERFAMILY SSF54211 169 253 1.39E-32 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEA_003846 9d2c7fac5f19961aecd8062b4d9e4a1f 357 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 4 357 51.157 T 13-10-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 VEA_003846 9d2c7fac5f19961aecd8062b4d9e4a1f 357 SUPERFAMILY SSF54211 254 344 4.05E-31 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEA_003846 9d2c7fac5f19961aecd8062b4d9e4a1f 357 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 169 357 37.826 T 13-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 VEA_003846 9d2c7fac5f19961aecd8062b4d9e4a1f 357 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 228 241 - T 13-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 VEA_003846 9d2c7fac5f19961aecd8062b4d9e4a1f 357 Gene3D G3DSA:3.30.230.40 257 357 7.4E-37 T 13-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 VEA_003846 9d2c7fac5f19961aecd8062b4d9e4a1f 357 Gene3D G3DSA:3.40.50.1000 1 165 1.4E-47 T 13-10-2018 IPR023214 HAD superfamily VEA_003846 9d2c7fac5f19961aecd8062b4d9e4a1f 357 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 5 164 2.0E-79 T 13-10-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 VEA_003846 9d2c7fac5f19961aecd8062b4d9e4a1f 357 Pfam PF08645 Polynucleotide kinase 3 phosphatase 6 133 4.7E-6 T 13-10-2018 IPR013954 Polynucleotide kinase 3 phosphatase Reactome: R-HSA-5649702 VEA_003846 9d2c7fac5f19961aecd8062b4d9e4a1f 357 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 6 151 1.6E-28 T 13-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 VEA_003846 9d2c7fac5f19961aecd8062b4d9e4a1f 357 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 147 1.5E-47 T 13-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 VEA_003846 9d2c7fac5f19961aecd8062b4d9e4a1f 357 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 198 339 8.8E-66 T 13-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 VEA_003846 9d2c7fac5f19961aecd8062b4d9e4a1f 357 SUPERFAMILY SSF56784 3 158 1.58E-39 T 13-10-2018 IPR036412 HAD-like superfamily VEA_003846 9d2c7fac5f19961aecd8062b4d9e4a1f 357 Gene3D G3DSA:3.30.230.40 166 256 1.6E-36 T 13-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 VEA_003846 9d2c7fac5f19961aecd8062b4d9e4a1f 357 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 321 333 - T 13-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 VEA_002262 3737ae883c8693a9992ef02e83dd4b45 326 SMART SM00244 18 218 9.6E-50 T 13-10-2018 IPR001107 Band 7 domain VEA_002262 3737ae883c8693a9992ef02e83dd4b45 326 PIRSF PIRSF005651 1 324 9.9E-96 T 13-10-2018 IPR010200 HflC GO:0016021|GO:0052547 VEA_002262 3737ae883c8693a9992ef02e83dd4b45 326 TIGRFAM TIGR01932 hflC: HflC protein 1 318 1.2E-136 T 13-10-2018 IPR010200 HflC GO:0016021|GO:0052547 VEA_002262 3737ae883c8693a9992ef02e83dd4b45 326 Pfam PF01145 SPFH domain / Band 7 family 22 233 1.4E-28 T 13-10-2018 IPR001107 Band 7 domain VEA_002262 3737ae883c8693a9992ef02e83dd4b45 326 SUPERFAMILY SSF117892 56 223 2.22E-21 T 13-10-2018 IPR036013 Band 7/SPFH domain superfamily VEA_002548 3c85caf3412c6112696086b095fa6b64 183 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 29 169 1.8E-26 T 13-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 VEA_002548 3c85caf3412c6112696086b095fa6b64 183 SMART SM00644 18 169 1.8E-53 T 13-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 VEA_002548 3c85caf3412c6112696086b095fa6b64 183 Gene3D G3DSA:3.40.80.10 4 183 3.7E-53 T 13-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 VEA_002548 3c85caf3412c6112696086b095fa6b64 183 SUPERFAMILY SSF55846 4 182 5.63E-64 T 13-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 VEA_003990 8f72eed2a5787cc3ebaf521cdbc48c2d 414 Pfam PF12704 MacB-like periplasmic core domain 30 240 5.6E-13 T 13-10-2018 IPR025857 MacB-like periplasmic core domain VEA_003990 8f72eed2a5787cc3ebaf521cdbc48c2d 414 Pfam PF02687 FtsX-like permease family 301 407 3.2E-12 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VEA_003990 8f72eed2a5787cc3ebaf521cdbc48c2d 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 413 1.8E-157 T 13-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 VEA_003990 8f72eed2a5787cc3ebaf521cdbc48c2d 414 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 4 414 2.3E-216 T 13-10-2018 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0016021|GO:0042953|GO:0042954|GO:0044874 VEA_000573 fda50f57c400021e089e0f701f2bbbe1 181 Gene3D G3DSA:3.40.30.10 26 181 4.7E-42 T 13-10-2018 VEA_000573 fda50f57c400021e089e0f701f2bbbe1 181 Pfam PF00255 Glutathione peroxidase 40 133 7.2E-25 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 VEA_000573 fda50f57c400021e089e0f701f2bbbe1 181 PRINTS PR01011 Glutathione peroxidase family signature 83 99 4.4E-12 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 VEA_000573 fda50f57c400021e089e0f701f2bbbe1 181 PRINTS PR01011 Glutathione peroxidase family signature 143 152 4.4E-12 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 VEA_000573 fda50f57c400021e089e0f701f2bbbe1 181 PRINTS PR01011 Glutathione peroxidase family signature 48 65 4.4E-12 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 VEA_000573 fda50f57c400021e089e0f701f2bbbe1 181 SUPERFAMILY SSF52833 40 181 2.03E-39 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VEA_000573 fda50f57c400021e089e0f701f2bbbe1 181 PIRSF PIRSF000303 2 181 1.3E-53 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 VEA_000573 fda50f57c400021e089e0f701f2bbbe1 181 ProSitePatterns PS00460 Glutathione peroxidases active site. 50 65 - T 13-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 VEA_003066 9c50e1d678106dec1bb752af630cf632 781 Pfam PF08497 Radical SAM N-terminal 24 370 1.1E-142 T 13-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal VEA_003066 9c50e1d678106dec1bb752af630cf632 781 SMART SM00729 367 617 1.6E-4 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VEA_003066 9c50e1d678106dec1bb752af630cf632 781 SUPERFAMILY SSF102114 370 605 4.97E-11 T 13-10-2018 VEA_003066 9c50e1d678106dec1bb752af630cf632 781 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 371 391 - T 13-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 VEA_003066 9c50e1d678106dec1bb752af630cf632 781 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 24 636 6.1E-263 T 13-10-2018 IPR022946 Uncharacterised protein family UPF0313 VEA_003066 9c50e1d678106dec1bb752af630cf632 781 Pfam PF04055 Radical SAM superfamily 371 576 7.0E-20 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VEA_003066 9c50e1d678106dec1bb752af630cf632 781 Gene3D G3DSA:3.80.30.20 366 628 2.4E-13 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VEA_003066 9c50e1d678106dec1bb752af630cf632 781 Pfam PF11842 Domain of unknown function (DUF3362) 585 729 1.8E-41 T 13-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal VEA_003066 9c50e1d678106dec1bb752af630cf632 781 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 24 638 49.091 T 13-10-2018 IPR022946 Uncharacterised protein family UPF0313 VEA_000553 42826ae8c1e97dc3e1f6495e395023b1 420 Pfam PF13520 Amino acid permease 9 366 7.5E-31 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VEA_000553 42826ae8c1e97dc3e1f6495e395023b1 420 PIRSF PIRSF006060 1 413 7.6E-55 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VEA_000553 42826ae8c1e97dc3e1f6495e395023b1 420 Gene3D G3DSA:1.20.1740.10 1 419 5.1E-60 T 13-10-2018 VEA_000043 bad8bae45d4bb8f2c7bfb671c32c87fb 331 Gene3D G3DSA:3.40.630.10 17 329 3.7E-73 T 13-10-2018 VEA_000043 bad8bae45d4bb8f2c7bfb671c32c87fb 331 SUPERFAMILY SSF53187 38 330 4.96E-50 T 13-10-2018 VEA_000043 bad8bae45d4bb8f2c7bfb671c32c87fb 331 PIRSF PIRSF039012 9 331 1.8E-94 T 13-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VEA_000043 bad8bae45d4bb8f2c7bfb671c32c87fb 331 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 56 329 6.8E-70 T 13-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VEA_002752 5e327edec2e4e5cd2fde8f06f1550bef 401 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 397 4.6E-160 T 13-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VEA_002752 5e327edec2e4e5cd2fde8f06f1550bef 401 SUPERFAMILY SSF69055 301 398 2.09E-30 T 13-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VEA_002752 5e327edec2e4e5cd2fde8f06f1550bef 401 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 1.1E-44 T 13-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VEA_002752 5e327edec2e4e5cd2fde8f06f1550bef 401 SUPERFAMILY SSF51735 2 150 3.08E-45 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_002752 5e327edec2e4e5cd2fde8f06f1550bef 401 Gene3D G3DSA:1.10.1740.10 312 400 7.3E-28 T 13-10-2018 VEA_002752 5e327edec2e4e5cd2fde8f06f1550bef 401 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 396 45.683 T 13-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VEA_002752 5e327edec2e4e5cd2fde8f06f1550bef 401 PIRSF PIRSF006205 1 401 3.8E-151 T 13-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VEA_002752 5e327edec2e4e5cd2fde8f06f1550bef 401 Gene3D G3DSA:3.40.50.720 1 150 7.1E-51 T 13-10-2018 VEA_002752 5e327edec2e4e5cd2fde8f06f1550bef 401 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 1.2E-37 T 13-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VEA_002752 5e327edec2e4e5cd2fde8f06f1550bef 401 SUPERFAMILY SSF55347 126 274 1.6E-62 T 13-10-2018 VEA_002752 5e327edec2e4e5cd2fde8f06f1550bef 401 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 391 1.1E-39 T 13-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VEA_002680 a3b0500532edaaa49a06df2d86f75e85 82 Gene3D G3DSA:1.10.10.710 5 78 1.0E-7 T 13-10-2018 IPR038627 YebG-like superfamily VEA_002680 a3b0500532edaaa49a06df2d86f75e85 82 Pfam PF07130 YebG protein 1 56 1.1E-20 T 13-10-2018 IPR009813 Uncharacterised protein family YebG VEA_002212 fef9d8cda3a2a6d7262c4b9a02c7eaa6 603 ProSitePatterns PS00194 Thioredoxin family active site. 512 530 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VEA_002212 fef9d8cda3a2a6d7262c4b9a02c7eaa6 603 Pfam PF13899 Thioredoxin-like 493 574 8.6E-14 T 13-10-2018 VEA_002212 fef9d8cda3a2a6d7262c4b9a02c7eaa6 603 SUPERFAMILY SSF52833 498 601 2.35E-23 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VEA_002212 fef9d8cda3a2a6d7262c4b9a02c7eaa6 603 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 603 38.56 T 13-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 VEA_002212 fef9d8cda3a2a6d7262c4b9a02c7eaa6 603 Pfam PF11412 Disulphide bond corrector protein DsbC 41 150 1.1E-28 T 13-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain VEA_002212 fef9d8cda3a2a6d7262c4b9a02c7eaa6 603 Gene3D G3DSA:2.60.40.1250 35 169 7.3E-40 T 13-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily VEA_002212 fef9d8cda3a2a6d7262c4b9a02c7eaa6 603 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 212 412 8.0E-18 T 13-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 VEA_002212 fef9d8cda3a2a6d7262c4b9a02c7eaa6 603 Gene3D G3DSA:3.40.30.10 477 603 3.4E-35 T 13-10-2018 VEA_002212 fef9d8cda3a2a6d7262c4b9a02c7eaa6 603 SUPERFAMILY SSF74863 39 152 3.27E-40 T 13-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily VEA_002019 e593906794a79913f976700d60baf3f2 631 SMART SM01228 546 617 1.4E-42 T 13-10-2018 VEA_002019 e593906794a79913f976700d60baf3f2 631 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 13-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 VEA_002019 e593906794a79913f976700d60baf3f2 631 SUPERFAMILY SSF51905 6 261 8.76E-52 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_002019 e593906794a79913f976700d60baf3f2 631 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 6.0E-294 T 13-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 VEA_002019 e593906794a79913f976700d60baf3f2 631 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.52 T 13-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 VEA_002019 e593906794a79913f976700d60baf3f2 631 Pfam PF13932 GidA associated domain 403 616 2.9E-76 T 13-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 VEA_002019 e593906794a79913f976700d60baf3f2 631 Pfam PF01134 Glucose inhibited division protein A 8 399 7.6E-169 T 13-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 VEA_002019 e593906794a79913f976700d60baf3f2 631 Gene3D G3DSA:1.10.10.1800 459 550 8.0E-32 T 13-10-2018 VEA_002019 e593906794a79913f976700d60baf3f2 631 Gene3D G3DSA:1.10.150.570 569 622 8.4E-23 T 13-10-2018 VEA_002019 e593906794a79913f976700d60baf3f2 631 Gene3D G3DSA:3.50.50.60 1 232 2.0E-90 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_002019 e593906794a79913f976700d60baf3f2 631 Gene3D G3DSA:3.50.50.60 296 458 2.1E-55 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_002019 e593906794a79913f976700d60baf3f2 631 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 13-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 VEA_000147 c68fb755ceab56b85d5739b337cab12c 119 Pfam PF06950 Protein of unknown function (DUF1293) 1 115 3.4E-74 T 13-10-2018 IPR009712 Vibrio phage Vf33, Vpf117 VEA_003429 53738d1cdd168d2b79c51b9b5fa5d5f6 157 Gene3D G3DSA:3.30.450.40 2 157 3.0E-63 T 13-10-2018 IPR029016 GAF-like domain superfamily VEA_003429 53738d1cdd168d2b79c51b9b5fa5d5f6 157 SUPERFAMILY SSF55781 4 145 2.3E-39 T 13-10-2018 VEA_003429 53738d1cdd168d2b79c51b9b5fa5d5f6 157 Pfam PF13185 GAF domain 38 145 3.7E-9 T 13-10-2018 IPR003018 GAF domain GO:0005515 VEA_003429 53738d1cdd168d2b79c51b9b5fa5d5f6 157 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 89 106 - T 13-10-2018 IPR000614 Free Met sulfoxide reductase conserved site VEA_004064 d0bb6f1347a05f17beeb0aedfc57ea09 86 Pfam PF00550 Phosphopantetheine attachment site 7 80 7.1E-10 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain VEA_004064 d0bb6f1347a05f17beeb0aedfc57ea09 86 SUPERFAMILY SSF47336 5 85 7.33E-14 T 13-10-2018 IPR036736 ACP-like superfamily VEA_004064 d0bb6f1347a05f17beeb0aedfc57ea09 86 Gene3D G3DSA:1.10.1200.10 3 86 3.7E-21 T 13-10-2018 IPR036736 ACP-like superfamily VEA_003027 d65f437b0329f7a8b637a3903e3af408 192 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 29 189 1.7E-35 T 13-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component VEA_003027 d65f437b0329f7a8b637a3903e3af408 192 SUPERFAMILY SSF159594 28 191 1.39E-28 T 13-10-2018 VEA_003027 d65f437b0329f7a8b637a3903e3af408 192 Gene3D G3DSA:3.40.50.10610 21 190 5.0E-10 T 13-10-2018 VEA_001381 1c8cf78f363821589b6b92f97b2d1f25 189 PIRSF PIRSF006276 49 189 6.3E-43 T 13-10-2018 IPR006015 Universal stress protein A VEA_001381 1c8cf78f363821589b6b92f97b2d1f25 189 Gene3D G3DSA:3.40.50.620 50 189 2.3E-35 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_001381 1c8cf78f363821589b6b92f97b2d1f25 189 Pfam PF00582 Universal stress protein family 51 186 4.1E-13 T 13-10-2018 IPR006016 UspA VEA_001381 1c8cf78f363821589b6b92f97b2d1f25 189 SUPERFAMILY SSF52402 51 187 1.0E-24 T 13-10-2018 VEA_002341 f1d9df4cc22c87b1718e4245a362ea07 550 SUPERFAMILY SSF53697 6 548 1.78E-226 T 13-10-2018 VEA_002341 f1d9df4cc22c87b1718e4245a362ea07 550 Gene3D G3DSA:3.40.50.10490 99 292 3.1E-242 T 13-10-2018 VEA_002341 f1d9df4cc22c87b1718e4245a362ea07 550 Gene3D G3DSA:3.40.50.10490 13 507 3.1E-242 T 13-10-2018 VEA_002341 f1d9df4cc22c87b1718e4245a362ea07 550 Gene3D G3DSA:1.10.1390.10 508 550 4.6E-20 T 13-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002341 f1d9df4cc22c87b1718e4245a362ea07 550 Pfam PF00342 Phosphoglucose isomerase 53 542 1.1E-255 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002341 f1d9df4cc22c87b1718e4245a362ea07 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 151 170 2.2E-56 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002341 f1d9df4cc22c87b1718e4245a362ea07 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 262 280 2.2E-56 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002341 f1d9df4cc22c87b1718e4245a362ea07 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 498 511 2.2E-56 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002341 f1d9df4cc22c87b1718e4245a362ea07 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 466 484 2.2E-56 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002341 f1d9df4cc22c87b1718e4245a362ea07 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 484 498 2.2E-56 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002341 f1d9df4cc22c87b1718e4245a362ea07 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 339 360 2.2E-56 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002341 f1d9df4cc22c87b1718e4245a362ea07 550 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 47 525 43.231 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002341 f1d9df4cc22c87b1718e4245a362ea07 550 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 266 279 - T 13-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002341 f1d9df4cc22c87b1718e4245a362ea07 550 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 498 515 - T 13-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_003071 ab41c627d76526d2d1fb5164869ae29e 760 Gene3D G3DSA:3.20.20.210 389 756 0.0 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VEA_003071 ab41c627d76526d2d1fb5164869ae29e 760 PIRSF PIRSF000382 2 760 0.0 T 13-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VEA_003071 ab41c627d76526d2d1fb5164869ae29e 760 SUPERFAMILY SSF51726 5 393 6.41E-111 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VEA_003071 ab41c627d76526d2d1fb5164869ae29e 760 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 758 36.046 T 13-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VEA_003071 ab41c627d76526d2d1fb5164869ae29e 760 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 431 753 3.3E-148 T 13-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VEA_003071 ab41c627d76526d2d1fb5164869ae29e 760 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 758 0.0 T 13-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VEA_003071 ab41c627d76526d2d1fb5164869ae29e 760 Gene3D G3DSA:3.20.20.210 7 524 0.0 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VEA_003071 ab41c627d76526d2d1fb5164869ae29e 760 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 315 6.1E-122 T 13-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VEA_003071 ab41c627d76526d2d1fb5164869ae29e 760 SUPERFAMILY SSF51726 396 757 8.76E-113 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VEA_001536 ec00538f3a3dc218cd71cfafe6f041e8 297 Gene3D G3DSA:3.40.50.1820 9 296 1.6E-37 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_001536 ec00538f3a3dc218cd71cfafe6f041e8 297 Pfam PF12146 Serine aminopeptidase, S33 32 271 3.6E-15 T 13-10-2018 IPR022742 Serine aminopeptidase, S33 VEA_001536 ec00538f3a3dc218cd71cfafe6f041e8 297 SUPERFAMILY SSF53474 10 295 8.95E-35 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_001145 94aa46a353631ebcf11b9eeba4042e8f 547 Pfam PF02321 Outer membrane efflux protein 311 490 1.5E-21 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VEA_001145 94aa46a353631ebcf11b9eeba4042e8f 547 Pfam PF02321 Outer membrane efflux protein 69 251 1.3E-25 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VEA_001145 94aa46a353631ebcf11b9eeba4042e8f 547 Gene3D G3DSA:1.20.1600.10 59 493 9.3E-110 T 13-10-2018 VEA_001145 94aa46a353631ebcf11b9eeba4042e8f 547 Gene3D G3DSA:2.20.200.10 106 381 9.3E-110 T 13-10-2018 VEA_001145 94aa46a353631ebcf11b9eeba4042e8f 547 SUPERFAMILY SSF56954 2 494 9.94E-94 T 13-10-2018 VEA_001095 a2653f8cdd4d811b8d7d21eb7fad3968 289 SUPERFAMILY SSF53613 2 274 2.49E-69 T 13-10-2018 IPR029056 Ribokinase-like VEA_001095 a2653f8cdd4d811b8d7d21eb7fad3968 289 Hamap MF_01639 Pyridoxal kinase PdxY [pdxY]. 1 284 52.867 T 13-10-2018 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282 VEA_001095 a2653f8cdd4d811b8d7d21eb7fad3968 289 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 284 1.3E-104 T 13-10-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 VEA_001095 a2653f8cdd4d811b8d7d21eb7fad3968 289 Gene3D G3DSA:3.40.1190.20 1 288 1.6E-87 T 13-10-2018 IPR029056 Ribokinase-like VEA_001095 a2653f8cdd4d811b8d7d21eb7fad3968 289 Pfam PF08543 Phosphomethylpyrimidine kinase 75 260 5.6E-21 T 13-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 VEA_003490 77dfc77bd81b67aa379c1c9cb9ecd7b7 1384 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 421 451 1.8E-5 T 13-10-2018 IPR006530 YD repeat VEA_003490 77dfc77bd81b67aa379c1c9cb9ecd7b7 1384 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 463 501 1.2E-5 T 13-10-2018 IPR006530 YD repeat VEA_003490 77dfc77bd81b67aa379c1c9cb9ecd7b7 1384 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 313 355 0.003 T 13-10-2018 IPR006530 YD repeat VEA_003490 77dfc77bd81b67aa379c1c9cb9ecd7b7 1384 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 505 546 8.6E-4 T 13-10-2018 IPR006530 YD repeat VEA_003490 77dfc77bd81b67aa379c1c9cb9ecd7b7 1384 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 955 991 2.0E-6 T 13-10-2018 IPR006530 YD repeat VEA_003490 77dfc77bd81b67aa379c1c9cb9ecd7b7 1384 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1056 1130 4.5E-27 T 13-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 VEA_003490 77dfc77bd81b67aa379c1c9cb9ecd7b7 1384 Gene3D G3DSA:3.90.930.1 517 636 7.6E-6 T 13-10-2018 VEA_003490 77dfc77bd81b67aa379c1c9cb9ecd7b7 1384 Gene3D G3DSA:3.90.930.1 398 516 1.3E-7 T 13-10-2018 VEA_003490 77dfc77bd81b67aa379c1c9cb9ecd7b7 1384 PRINTS PR00394 RHS protein signature 1099 1118 9.1E-11 T 13-10-2018 IPR001826 RHS protein VEA_003490 77dfc77bd81b67aa379c1c9cb9ecd7b7 1384 PRINTS PR00394 RHS protein signature 1023 1043 9.1E-11 T 13-10-2018 IPR001826 RHS protein VEA_003490 77dfc77bd81b67aa379c1c9cb9ecd7b7 1384 PRINTS PR00394 RHS protein signature 1076 1096 9.1E-11 T 13-10-2018 IPR001826 RHS protein VEA_003490 77dfc77bd81b67aa379c1c9cb9ecd7b7 1384 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 1285 1343 8.7E-6 T 13-10-2018 IPR032871 AHH domain-containing protein VEA_003490 77dfc77bd81b67aa379c1c9cb9ecd7b7 1384 Pfam PF05593 RHS Repeat 954 986 4.8E-5 T 13-10-2018 IPR031325 RHS repeat VEA_003490 77dfc77bd81b67aa379c1c9cb9ecd7b7 1384 Pfam PF05593 RHS Repeat 422 458 1.8E-7 T 13-10-2018 IPR031325 RHS repeat VEA_003490 77dfc77bd81b67aa379c1c9cb9ecd7b7 1384 Pfam PF05593 RHS Repeat 886 913 1.7E-5 T 13-10-2018 IPR031325 RHS repeat VEA_003490 77dfc77bd81b67aa379c1c9cb9ecd7b7 1384 Pfam PF05593 RHS Repeat 463 499 9.2E-5 T 13-10-2018 IPR031325 RHS repeat VEA_003490 77dfc77bd81b67aa379c1c9cb9ecd7b7 1384 Gene3D G3DSA:2.180.10.10 692 1131 9.5E-41 T 13-10-2018 VEA_003490 77dfc77bd81b67aa379c1c9cb9ecd7b7 1384 Pfam PF03527 RHS protein 1029 1063 4.6E-14 T 13-10-2018 IPR001826 RHS protein VEA_003091 2e3873ad08238934c8bee7bf4f25ff04 206 Pfam PF01300 Telomere recombination 23 198 1.2E-46 T 13-10-2018 IPR006070 YrdC-like domain GO:0003725 VEA_003091 2e3873ad08238934c8bee7bf4f25ff04 206 SUPERFAMILY SSF55821 1 203 6.71E-65 T 13-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VEA_003091 2e3873ad08238934c8bee7bf4f25ff04 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 5.5E-72 T 13-10-2018 IPR006070 YrdC-like domain GO:0003725 VEA_003091 2e3873ad08238934c8bee7bf4f25ff04 206 Gene3D G3DSA:3.90.870.10 1 205 3.1E-69 T 13-10-2018 VEA_001805 ab1a93c321b4ceb6d459f89f92f91323 380 Gene3D G3DSA:3.40.640.10 1 249 2.7E-75 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_001805 ab1a93c321b4ceb6d459f89f92f91323 380 Gene3D G3DSA:3.90.1150.10 250 375 6.6E-28 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEA_001805 ab1a93c321b4ceb6d459f89f92f91323 380 PIRSF PIRSF000390 1 379 3.7E-106 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VEA_001805 ab1a93c321b4ceb6d459f89f92f91323 380 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 16 371 7.3E-83 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VEA_001805 ab1a93c321b4ceb6d459f89f92f91323 380 SUPERFAMILY SSF53383 2 376 8.16E-98 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_001805 ab1a93c321b4ceb6d459f89f92f91323 380 TIGRFAM TIGR02379 ECA_wecE: TDP-4-keto-6-deoxy-D-glucose transaminase 1 375 3.6E-206 T 13-10-2018 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like MetaCyc: PWY-7315 VEA_003355 01d9a5de6d463edd7dc0b5e96bed1974 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 2.0E-9 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEA_003355 01d9a5de6d463edd7dc0b5e96bed1974 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 2.0E-9 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEA_003355 01d9a5de6d463edd7dc0b5e96bed1974 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 53 69 2.0E-9 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEA_003355 01d9a5de6d463edd7dc0b5e96bed1974 150 Gene3D G3DSA:1.10.10.10 1 148 1.4E-30 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_003355 01d9a5de6d463edd7dc0b5e96bed1974 150 SMART SM00347 29 129 3.7E-16 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEA_003355 01d9a5de6d463edd7dc0b5e96bed1974 150 Pfam PF01047 MarR family 37 93 1.9E-14 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEA_003355 01d9a5de6d463edd7dc0b5e96bed1974 150 SUPERFAMILY SSF46785 6 146 1.3E-27 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_003515 46d3c3e140204b3636be68f911938ac0 137 SUPERFAMILY SSF55811 4 117 7.58E-15 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VEA_003515 46d3c3e140204b3636be68f911938ac0 137 Pfam PF00293 NUDIX domain 8 70 1.7E-7 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VEA_003515 46d3c3e140204b3636be68f911938ac0 137 Gene3D G3DSA:3.90.79.10 2 133 1.5E-12 T 13-10-2018 VEA_004511 9ef295074d8456cbc6a0190a19da7009 142 Gene3D G3DSA:3.90.1180.10 1 142 2.0E-64 T 13-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 VEA_004511 9ef295074d8456cbc6a0190a19da7009 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 13-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 VEA_004511 9ef295074d8456cbc6a0190a19da7009 142 Pfam PF00572 Ribosomal protein L13 15 138 3.0E-57 T 13-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VEA_004511 9ef295074d8456cbc6a0190a19da7009 142 PIRSF PIRSF002181 1 142 4.5E-53 T 13-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VEA_004511 9ef295074d8456cbc6a0190a19da7009 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 1.1E-65 T 13-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_004511 9ef295074d8456cbc6a0190a19da7009 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.809 T 13-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VEA_004511 9ef295074d8456cbc6a0190a19da7009 142 SUPERFAMILY SSF52161 1 140 1.14E-60 T 13-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 VEA_000199 bcc5deead6fb56792de65983d248fda9 419 Gene3D G3DSA:3.40.50.300 1 217 6.5E-78 T 13-10-2018 VEA_000199 bcc5deead6fb56792de65983d248fda9 419 Pfam PF00271 Helicase conserved C-terminal domain 233 338 1.1E-27 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_000199 bcc5deead6fb56792de65983d248fda9 419 SMART SM00490 257 338 4.6E-32 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_000199 bcc5deead6fb56792de65983d248fda9 419 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VEA_000199 bcc5deead6fb56792de65983d248fda9 419 SUPERFAMILY SSF52540 74 359 5.19E-77 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000199 bcc5deead6fb56792de65983d248fda9 419 Gene3D G3DSA:3.40.50.300 218 417 8.6E-48 T 13-10-2018 VEA_000199 bcc5deead6fb56792de65983d248fda9 419 SMART SM00487 22 221 8.5E-61 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEA_000199 bcc5deead6fb56792de65983d248fda9 419 Pfam PF00270 DEAD/DEAH box helicase 27 194 1.0E-54 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VEA_001047 0163826fc62e21b0541c741e67c694ad 299 Gene3D G3DSA:1.10.10.60 5 65 2.5E-13 T 13-10-2018 VEA_001047 0163826fc62e21b0541c741e67c694ad 299 SUPERFAMILY SSF46689 59 107 3.48E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_001047 0163826fc62e21b0541c741e67c694ad 299 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 60 102 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VEA_001047 0163826fc62e21b0541c741e67c694ad 299 Gene3D G3DSA:3.20.80.10 151 299 5.8E-37 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VEA_001047 0163826fc62e21b0541c741e67c694ad 299 SUPERFAMILY SSF46689 6 57 4.03E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_001047 0163826fc62e21b0541c741e67c694ad 299 SUPERFAMILY SSF55136 153 299 5.41E-29 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VEA_001047 0163826fc62e21b0541c741e67c694ad 299 SMART SM00342 23 106 3.9E-30 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_001047 0163826fc62e21b0541c741e67c694ad 299 Gene3D G3DSA:1.10.10.60 66 120 4.9E-14 T 13-10-2018 VEA_001047 0163826fc62e21b0541c741e67c694ad 299 Pfam PF12833 Helix-turn-helix domain 30 106 2.4E-22 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_001047 0163826fc62e21b0541c741e67c694ad 299 Pfam PF06445 GyrI-like small molecule binding domain 156 298 4.4E-24 T 13-10-2018 IPR029442 GyrI-like small molecule binding domain VEA_001047 0163826fc62e21b0541c741e67c694ad 299 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 75 90 7.0E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEA_001047 0163826fc62e21b0541c741e67c694ad 299 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 90 106 7.0E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEA_001047 0163826fc62e21b0541c741e67c694ad 299 SMART SM00871 150 299 3.5E-22 T 13-10-2018 IPR010499 Bacterial transcription activator, effector binding VEA_001493 4d8ce648b5890bf996701653cfd6b7b7 339 SUPERFAMILY SSF53474 24 291 3.33E-11 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_001493 4d8ce648b5890bf996701653cfd6b7b7 339 Gene3D G3DSA:3.40.50.1820 18 268 1.7E-11 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_004496 568d6b5e39a3916144e2114ab2dbbbd5 597 Pfam PF03717 Penicillin-binding Protein dimerisation domain 91 245 7.4E-20 T 13-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 VEA_004496 568d6b5e39a3916144e2114ab2dbbbd5 597 Pfam PF00905 Penicillin binding protein transpeptidase domain 284 580 1.2E-76 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VEA_004496 568d6b5e39a3916144e2114ab2dbbbd5 597 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 43 595 44.785 T 13-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VEA_004496 568d6b5e39a3916144e2114ab2dbbbd5 597 SUPERFAMILY SSF56601 259 588 2.82E-91 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VEA_004496 568d6b5e39a3916144e2114ab2dbbbd5 597 Gene3D G3DSA:3.90.1310.30 83 258 4.2E-45 T 13-10-2018 VEA_004496 568d6b5e39a3916144e2114ab2dbbbd5 597 Gene3D G3DSA:3.40.710.10 320 502 2.8E-105 T 13-10-2018 VEA_004496 568d6b5e39a3916144e2114ab2dbbbd5 597 SUPERFAMILY SSF56519 87 258 3.53E-45 T 13-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 VEA_004496 568d6b5e39a3916144e2114ab2dbbbd5 597 Gene3D G3DSA:3.30.450.330 260 584 2.8E-105 T 13-10-2018 VEA_003894 51f96ad902523ae99a2852867ba6b37a 1053 Gene3D G3DSA:3.30.70.1320 133 332 0.0 T 13-10-2018 VEA_003894 51f96ad902523ae99a2852867ba6b37a 1053 SUPERFAMILY SSF82693 672 856 2.88E-26 T 13-10-2018 VEA_003894 51f96ad902523ae99a2852867ba6b37a 1053 Gene3D G3DSA:3.30.2090.10 721 809 0.0 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_003894 51f96ad902523ae99a2852867ba6b37a 1053 Pfam PF00873 AcrB/AcrD/AcrF family 1 1025 0.0 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_003894 51f96ad902523ae99a2852867ba6b37a 1053 Gene3D G3DSA:1.20.1640.10 8 512 0.0 T 13-10-2018 VEA_003894 51f96ad902523ae99a2852867ba6b37a 1053 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 2.8E-108 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_003894 51f96ad902523ae99a2852867ba6b37a 1053 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.8E-108 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_003894 51f96ad902523ae99a2852867ba6b37a 1053 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.8E-108 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_003894 51f96ad902523ae99a2852867ba6b37a 1053 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.8E-108 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_003894 51f96ad902523ae99a2852867ba6b37a 1053 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 2.8E-108 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_003894 51f96ad902523ae99a2852867ba6b37a 1053 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.8E-108 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_003894 51f96ad902523ae99a2852867ba6b37a 1053 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 2.8E-108 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_003894 51f96ad902523ae99a2852867ba6b37a 1053 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 2.8E-108 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_003894 51f96ad902523ae99a2852867ba6b37a 1053 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 2.8E-108 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_003894 51f96ad902523ae99a2852867ba6b37a 1053 SUPERFAMILY SSF82866 831 1025 4.32E-40 T 13-10-2018 VEA_003894 51f96ad902523ae99a2852867ba6b37a 1053 Gene3D G3DSA:3.30.2090.10 179 275 0.0 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_003894 51f96ad902523ae99a2852867ba6b37a 1053 Gene3D G3DSA:3.30.70.1430 38 817 0.0 T 13-10-2018 VEA_003894 51f96ad902523ae99a2852867ba6b37a 1053 Gene3D G3DSA:1.20.1640.10 513 1022 0.0 T 13-10-2018 VEA_003894 51f96ad902523ae99a2852867ba6b37a 1053 Gene3D G3DSA:3.30.70.1430 567 668 0.0 T 13-10-2018 VEA_003894 51f96ad902523ae99a2852867ba6b37a 1053 Gene3D G3DSA:3.30.70.1440 669 865 0.0 T 13-10-2018 VEA_003894 51f96ad902523ae99a2852867ba6b37a 1053 SUPERFAMILY SSF82714 722 809 8.63E-22 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_003894 51f96ad902523ae99a2852867ba6b37a 1053 SUPERFAMILY SSF82693 136 330 5.75E-24 T 13-10-2018 VEA_003894 51f96ad902523ae99a2852867ba6b37a 1053 SUPERFAMILY SSF82693 565 670 1.36E-30 T 13-10-2018 VEA_003894 51f96ad902523ae99a2852867ba6b37a 1053 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1041 0.0 T 13-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 VEA_003894 51f96ad902523ae99a2852867ba6b37a 1053 SUPERFAMILY SSF82714 182 272 1.83E-20 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_003894 51f96ad902523ae99a2852867ba6b37a 1053 SUPERFAMILY SSF82866 296 497 1.26E-48 T 13-10-2018 VEA_003894 51f96ad902523ae99a2852867ba6b37a 1053 SUPERFAMILY SSF82693 38 131 1.26E-24 T 13-10-2018 VEA_004154 4cac21ee2567c59d83369ac61016718e 318 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 183 318 9.0E-73 T 13-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 VEA_004154 4cac21ee2567c59d83369ac61016718e 318 SMART SM00771 180 310 1.6E-73 T 13-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 VEA_004154 4cac21ee2567c59d83369ac61016718e 318 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 182 309 8.5E-48 T 13-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 VEA_004154 4cac21ee2567c59d83369ac61016718e 318 Hamap MF_00509 Cell division protein ZipA [zipA]. 2 312 23.217 T 13-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 VEA_004154 4cac21ee2567c59d83369ac61016718e 318 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 3 310 3.0E-88 T 13-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 VEA_004154 4cac21ee2567c59d83369ac61016718e 318 Gene3D G3DSA:3.30.1400.10 179 318 2.5E-51 T 13-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 VEA_004154 4cac21ee2567c59d83369ac61016718e 318 SUPERFAMILY SSF64383 182 314 1.83E-49 T 13-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 VEA_000119 0e39157ab52e2fb88d2aefe643e4fcfe 368 Gene3D G3DSA:2.40.50.100 291 359 1.2E-13 T 13-10-2018 VEA_000119 0e39157ab52e2fb88d2aefe643e4fcfe 368 SUPERFAMILY SSF50331 235 358 4.04E-18 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VEA_000119 0e39157ab52e2fb88d2aefe643e4fcfe 368 SUPERFAMILY SSF52540 11 236 2.21E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000119 0e39157ab52e2fb88d2aefe643e4fcfe 368 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 3 358 1.4E-138 T 13-10-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 VEA_000119 0e39157ab52e2fb88d2aefe643e4fcfe 368 Gene3D G3DSA:3.40.50.300 4 234 1.6E-54 T 13-10-2018 VEA_000119 0e39157ab52e2fb88d2aefe643e4fcfe 368 Pfam PF03459 TOBE domain 292 358 1.2E-13 T 13-10-2018 IPR005116 Transport-associated OB, type 1 VEA_000119 0e39157ab52e2fb88d2aefe643e4fcfe 368 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_000119 0e39157ab52e2fb88d2aefe643e4fcfe 368 Pfam PF00005 ABC transporter 17 157 2.9E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_000119 0e39157ab52e2fb88d2aefe643e4fcfe 368 SMART SM00382 24 206 7.9E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_003016 8afabea61627b06977a08ae8bf0a1979 230 PIRSF PIRSF037290 1 230 5.1E-73 T 13-10-2018 IPR017166 Uncharacterised conserved protein UCP037290 VEA_003016 8afabea61627b06977a08ae8bf0a1979 230 Gene3D G3DSA:3.40.50.300 52 158 1.5E-28 T 13-10-2018 VEA_003016 8afabea61627b06977a08ae8bf0a1979 230 Pfam PF00154 recA bacterial DNA recombination protein 29 125 1.0E-5 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VEA_003016 8afabea61627b06977a08ae8bf0a1979 230 SUPERFAMILY SSF52540 56 159 9.86E-28 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003585 a4a7e1203e9214f8267c2f3ebc9ed177 445 Pfam PF00027 Cyclic nucleotide-binding domain 23 101 2.5E-9 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain VEA_003585 a4a7e1203e9214f8267c2f3ebc9ed177 445 SUPERFAMILY SSF51206 13 132 5.11E-15 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like VEA_003585 a4a7e1203e9214f8267c2f3ebc9ed177 445 Gene3D G3DSA:3.30.565.10 290 443 1.7E-30 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_003585 a4a7e1203e9214f8267c2f3ebc9ed177 445 SMART SM00100 2 124 6.2E-4 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain VEA_003585 a4a7e1203e9214f8267c2f3ebc9ed177 445 Gene3D G3DSA:1.10.287.130 132 238 2.0E-10 T 13-10-2018 VEA_003585 a4a7e1203e9214f8267c2f3ebc9ed177 445 Gene3D G3DSA:2.60.120.10 10 131 1.7E-11 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VEA_003585 a4a7e1203e9214f8267c2f3ebc9ed177 445 SUPERFAMILY SSF55874 293 437 4.58E-27 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_003585 a4a7e1203e9214f8267c2f3ebc9ed177 445 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 330 439 4.3E-15 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_003585 a4a7e1203e9214f8267c2f3ebc9ed177 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 396 6.1E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_003585 a4a7e1203e9214f8267c2f3ebc9ed177 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 382 6.1E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_003585 a4a7e1203e9214f8267c2f3ebc9ed177 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 419 6.1E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_003585 a4a7e1203e9214f8267c2f3ebc9ed177 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 437 6.1E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_003585 a4a7e1203e9214f8267c2f3ebc9ed177 445 SMART SM00387 329 440 1.9E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_001581 882e5eaae60df40203b5da39b1f722f6 553 Gene3D G3DSA:3.50.50.60 7 386 4.4E-183 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_001581 882e5eaae60df40203b5da39b1f722f6 553 SUPERFAMILY SSF51905 3 452 2.92E-53 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_001581 882e5eaae60df40203b5da39b1f722f6 553 SUPERFAMILY SSF54373 213 310 7.45E-33 T 13-10-2018 VEA_001581 882e5eaae60df40203b5da39b1f722f6 553 Gene3D G3DSA:3.30.70.20 455 548 8.1E-36 T 13-10-2018 VEA_001581 882e5eaae60df40203b5da39b1f722f6 553 Pfam PF13450 NAD(P)-binding Rossmann-like domain 12 58 1.2E-6 T 13-10-2018 VEA_001581 882e5eaae60df40203b5da39b1f722f6 553 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 5.5E-6 T 13-10-2018 VEA_001581 882e5eaae60df40203b5da39b1f722f6 553 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 181 196 5.5E-6 T 13-10-2018 VEA_001581 882e5eaae60df40203b5da39b1f722f6 553 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 450 551 2.8E-47 T 13-10-2018 VEA_001581 882e5eaae60df40203b5da39b1f722f6 553 SUPERFAMILY SSF54862 454 553 4.19E-27 T 13-10-2018 VEA_001581 882e5eaae60df40203b5da39b1f722f6 553 Gene3D G3DSA:3.30.9.90 80 454 4.4E-183 T 13-10-2018 VEA_001435 9a34bb510b557e704dad71b372d1ccaf 285 SUPERFAMILY SSF103481 33 131 4.58E-9 T 13-10-2018 VEA_001435 9a34bb510b557e704dad71b372d1ccaf 285 SUPERFAMILY SSF103481 182 274 8.24E-9 T 13-10-2018 VEA_001435 9a34bb510b557e704dad71b372d1ccaf 285 Pfam PF00892 EamA-like transporter family 140 271 4.3E-9 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEA_001435 9a34bb510b557e704dad71b372d1ccaf 285 Pfam PF00892 EamA-like transporter family 1 131 7.8E-7 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEA_002536 19aaa7b972ebbb60be8854dfb6662233 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 2.8E-27 T 13-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002536 19aaa7b972ebbb60be8854dfb6662233 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 13-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_002536 19aaa7b972ebbb60be8854dfb6662233 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 23.052 T 13-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002536 19aaa7b972ebbb60be8854dfb6662233 82 Pfam PF00886 Ribosomal protein S16 8 68 1.2E-23 T 13-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002536 19aaa7b972ebbb60be8854dfb6662233 82 Gene3D G3DSA:3.30.1320.10 1 82 1.6E-31 T 13-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002536 19aaa7b972ebbb60be8854dfb6662233 82 SUPERFAMILY SSF54565 1 76 5.89E-28 T 13-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002416 8ed78f828348718e1c3dd6465c064bc8 241 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 3.9E-44 T 13-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 VEA_002416 8ed78f828348718e1c3dd6465c064bc8 241 SMART SM00563 67 182 5.5E-41 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VEA_002416 8ed78f828348718e1c3dd6465c064bc8 241 Pfam PF01553 Acyltransferase 58 180 3.8E-32 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VEA_002416 8ed78f828348718e1c3dd6465c064bc8 241 SUPERFAMILY SSF69593 4 235 1.18E-57 T 13-10-2018 VEA_001303 e906d3929d0a388f0175879ac4f43167 112 Gene3D G3DSA:2.60.120.10 1 112 1.1E-46 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VEA_001303 e906d3929d0a388f0175879ac4f43167 112 Pfam PF09313 Domain of unknown function (DUF1971) 14 94 2.6E-25 T 13-10-2018 IPR015392 Domain of unknown function DUF1971 VEA_001303 e906d3929d0a388f0175879ac4f43167 112 SUPERFAMILY SSF51197 6 99 1.11E-31 T 13-10-2018 VEA_001303 e906d3929d0a388f0175879ac4f43167 112 PIRSF PIRSF020632 3 112 3.1E-61 T 13-10-2018 IPR014510 Tellurite resistance predicted, YeaR VEA_003425 da610009e2e93dd1ae0ddfc56fe90045 478 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 5 478 66.462 T 13-10-2018 IPR023545 rRNA small subunit methyltransferase F GO:0008649 VEA_003425 da610009e2e93dd1ae0ddfc56fe90045 478 Gene3D G3DSA:2.30.130.90 309 478 2.0E-68 T 13-10-2018 VEA_003425 da610009e2e93dd1ae0ddfc56fe90045 478 Pfam PF01189 16S rRNA methyltransferase RsmB/F 111 306 6.1E-49 T 13-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 VEA_003425 da610009e2e93dd1ae0ddfc56fe90045 478 Gene3D G3DSA:3.40.50.150 2 308 4.7E-98 T 13-10-2018 VEA_003425 da610009e2e93dd1ae0ddfc56fe90045 478 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 419 473 1.1E-10 T 13-10-2018 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain VEA_003425 da610009e2e93dd1ae0ddfc56fe90045 478 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 7 103 4.7E-29 T 13-10-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 VEA_003425 da610009e2e93dd1ae0ddfc56fe90045 478 SUPERFAMILY SSF53335 7 308 3.47E-62 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_003425 da610009e2e93dd1ae0ddfc56fe90045 478 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 40 308 1.1E-100 T 13-10-2018 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 VEA_003425 da610009e2e93dd1ae0ddfc56fe90045 478 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 186 197 - T 13-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 VEA_003425 da610009e2e93dd1ae0ddfc56fe90045 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 120 130 1.3E-27 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VEA_003425 da610009e2e93dd1ae0ddfc56fe90045 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 187 199 1.3E-27 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VEA_003425 da610009e2e93dd1ae0ddfc56fe90045 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 237 253 1.3E-27 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VEA_003425 da610009e2e93dd1ae0ddfc56fe90045 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 291 308 1.3E-27 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VEA_003425 da610009e2e93dd1ae0ddfc56fe90045 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 89 103 1.3E-27 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VEA_002310 6caa6a31b553491f6e964184f9e751ff 877 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 535 547 - T 13-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VEA_002310 6caa6a31b553491f6e964184f9e751ff 877 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 13-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VEA_002310 6caa6a31b553491f6e964184f9e751ff 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 384 404 1.2E-67 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VEA_002310 6caa6a31b553491f6e964184f9e751ff 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 1.2E-67 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VEA_002310 6caa6a31b553491f6e964184f9e751ff 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 1.2E-67 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VEA_002310 6caa6a31b553491f6e964184f9e751ff 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 575 604 1.2E-67 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VEA_002310 6caa6a31b553491f6e964184f9e751ff 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 707 733 1.2E-67 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VEA_002310 6caa6a31b553491f6e964184f9e751ff 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 533 553 1.2E-67 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VEA_002310 6caa6a31b553491f6e964184f9e751ff 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 1.2E-67 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VEA_002310 6caa6a31b553491f6e964184f9e751ff 877 SUPERFAMILY SSF51621 6 877 0.0 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VEA_002310 6caa6a31b553491f6e964184f9e751ff 877 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 877 17.979 T 13-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VEA_002310 6caa6a31b553491f6e964184f9e751ff 877 Gene3D G3DSA:1.20.1440.90 273 387 2.8E-27 T 13-10-2018 VEA_002310 6caa6a31b553491f6e964184f9e751ff 877 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 877 1.0E-289 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VEA_004341 df5ad275b21557cee956c7b094a54358 488 SUPERFAMILY SSF51412 1 477 5.23E-125 T 13-10-2018 VEA_004341 df5ad275b21557cee956c7b094a54358 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 85.076 T 13-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 VEA_004341 df5ad275b21557cee956c7b094a54358 488 PIRSF PIRSF000130 1 488 2.1E-201 T 13-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 VEA_004341 df5ad275b21557cee956c7b094a54358 488 Pfam PF00571 CBS domain 149 201 3.8E-4 T 13-10-2018 IPR000644 CBS domain VEA_004341 df5ad275b21557cee956c7b094a54358 488 Pfam PF00571 CBS domain 89 140 2.7E-10 T 13-10-2018 IPR000644 CBS domain VEA_004341 df5ad275b21557cee956c7b094a54358 488 Gene3D G3DSA:3.20.20.70 1 486 5.5E-211 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_004341 df5ad275b21557cee956c7b094a54358 488 SUPERFAMILY SSF54631 93 203 1.39E-26 T 13-10-2018 VEA_004341 df5ad275b21557cee956c7b094a54358 488 SMART SM01240 7 473 0.0 T 13-10-2018 VEA_004341 df5ad275b21557cee956c7b094a54358 488 SMART SM00116 158 206 3.1E-5 T 13-10-2018 IPR000644 CBS domain VEA_004341 df5ad275b21557cee956c7b094a54358 488 SMART SM00116 96 144 5.6E-12 T 13-10-2018 IPR000644 CBS domain VEA_004341 df5ad275b21557cee956c7b094a54358 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 13-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 VEA_004341 df5ad275b21557cee956c7b094a54358 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 1.6E-196 T 13-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 VEA_004341 df5ad275b21557cee956c7b094a54358 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 4.0E-162 T 13-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 VEA_004205 af222867b37491f9d468dc4d1e1bdcac 203 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 3 201 26.312 T 13-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 VEA_004205 af222867b37491f9d468dc4d1e1bdcac 203 Gene3D G3DSA:2.50.20.10 23 202 1.7E-50 T 13-10-2018 VEA_004205 af222867b37491f9d468dc4d1e1bdcac 203 Pfam PF03550 Outer membrane lipoprotein LolB 42 199 7.1E-42 T 13-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 VEA_004205 af222867b37491f9d468dc4d1e1bdcac 203 SUPERFAMILY SSF89392 18 201 3.92E-48 T 13-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX VEA_004205 af222867b37491f9d468dc4d1e1bdcac 203 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 6 200 3.0E-36 T 13-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 VEA_001445 729ef1d20665abad048ca7cfaad46b37 356 Gene3D G3DSA:1.10.760.10 232 356 1.8E-30 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEA_001445 729ef1d20665abad048ca7cfaad46b37 356 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 4 77 5.7E-14 T 13-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001445 729ef1d20665abad048ca7cfaad46b37 356 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 251 325 2.2E-11 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001445 729ef1d20665abad048ca7cfaad46b37 356 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 160 208 - T 13-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001445 729ef1d20665abad048ca7cfaad46b37 356 SUPERFAMILY SSF49503 90 229 1.74E-53 T 13-10-2018 IPR008972 Cupredoxin VEA_001445 729ef1d20665abad048ca7cfaad46b37 356 PRINTS PR01166 Cytochrome c oxidase subunit II signature 88 107 3.1E-40 T 13-10-2018 VEA_001445 729ef1d20665abad048ca7cfaad46b37 356 PRINTS PR01166 Cytochrome c oxidase subunit II signature 159 179 3.1E-40 T 13-10-2018 VEA_001445 729ef1d20665abad048ca7cfaad46b37 356 PRINTS PR01166 Cytochrome c oxidase subunit II signature 197 214 3.1E-40 T 13-10-2018 VEA_001445 729ef1d20665abad048ca7cfaad46b37 356 PRINTS PR01166 Cytochrome c oxidase subunit II signature 54 66 3.1E-40 T 13-10-2018 VEA_001445 729ef1d20665abad048ca7cfaad46b37 356 PRINTS PR01166 Cytochrome c oxidase subunit II signature 66 86 3.1E-40 T 13-10-2018 VEA_001445 729ef1d20665abad048ca7cfaad46b37 356 PRINTS PR01166 Cytochrome c oxidase subunit II signature 135 156 3.1E-40 T 13-10-2018 VEA_001445 729ef1d20665abad048ca7cfaad46b37 356 PRINTS PR01166 Cytochrome c oxidase subunit II signature 179 196 3.1E-40 T 13-10-2018 VEA_001445 729ef1d20665abad048ca7cfaad46b37 356 Gene3D G3DSA:2.60.40.420 88 225 1.8E-81 T 13-10-2018 IPR008972 Cupredoxin VEA_001445 729ef1d20665abad048ca7cfaad46b37 356 SUPERFAMILY SSF46626 194 336 8.05E-26 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEA_001445 729ef1d20665abad048ca7cfaad46b37 356 SUPERFAMILY SSF81464 3 86 1.59E-25 T 13-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001445 729ef1d20665abad048ca7cfaad46b37 356 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 6 224 8.2E-61 T 13-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001445 729ef1d20665abad048ca7cfaad46b37 356 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 92 214 6.8E-36 T 13-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001445 729ef1d20665abad048ca7cfaad46b37 356 Gene3D G3DSA:1.10.287.90 16 87 1.8E-81 T 13-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_000208 7b26d0e417bf547dd42d99efffbaf28a 582 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 103 113 - T 13-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 VEA_000208 7b26d0e417bf547dd42d99efffbaf28a 582 SUPERFAMILY SSF52540 4 580 5.19E-217 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000208 7b26d0e417bf547dd42d99efffbaf28a 582 Gene3D G3DSA:3.10.410.10 469 558 5.2E-30 T 13-10-2018 VEA_000208 7b26d0e417bf547dd42d99efffbaf28a 582 Gene3D G3DSA:3.40.50.300 4 454 9.7E-189 T 13-10-2018 VEA_000208 7b26d0e417bf547dd42d99efffbaf28a 582 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 345 356 - T 13-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 VEA_000208 7b26d0e417bf547dd42d99efffbaf28a 582 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 582 42.791 T 13-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 VEA_000208 7b26d0e417bf547dd42d99efffbaf28a 582 Pfam PF01268 Formate--tetrahydrofolate ligase 3 581 3.6E-240 T 13-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 VEA_000208 7b26d0e417bf547dd42d99efffbaf28a 582 Gene3D G3DSA:3.30.1510.10 129 264 9.7E-189 T 13-10-2018 VEA_000503 38e5f78af5f5346de6a788bace9472f9 972 SUPERFAMILY SSF82866 730 957 5.49E-44 T 13-10-2018 VEA_000503 38e5f78af5f5346de6a788bace9472f9 972 Gene3D G3DSA:3.30.70.1430 489 593 1.5E-280 T 13-10-2018 VEA_000503 38e5f78af5f5346de6a788bace9472f9 972 Gene3D G3DSA:3.30.70.1320 56 256 1.5E-280 T 13-10-2018 VEA_000503 38e5f78af5f5346de6a788bace9472f9 972 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 955 0.0 T 13-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 VEA_000503 38e5f78af5f5346de6a788bace9472f9 972 PRINTS PR00702 Acriflavin resistance protein family signature 370 393 3.9E-70 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_000503 38e5f78af5f5346de6a788bace9472f9 972 PRINTS PR00702 Acriflavin resistance protein family signature 395 418 3.9E-70 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_000503 38e5f78af5f5346de6a788bace9472f9 972 PRINTS PR00702 Acriflavin resistance protein family signature 543 557 3.9E-70 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_000503 38e5f78af5f5346de6a788bace9472f9 972 PRINTS PR00702 Acriflavin resistance protein family signature 474 491 3.9E-70 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_000503 38e5f78af5f5346de6a788bace9472f9 972 PRINTS PR00702 Acriflavin resistance protein family signature 287 308 3.9E-70 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_000503 38e5f78af5f5346de6a788bace9472f9 972 PRINTS PR00702 Acriflavin resistance protein family signature 315 339 3.9E-70 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_000503 38e5f78af5f5346de6a788bace9472f9 972 PRINTS PR00702 Acriflavin resistance protein family signature 260 283 3.9E-70 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_000503 38e5f78af5f5346de6a788bace9472f9 972 Gene3D G3DSA:3.30.70.1440 594 791 1.5E-280 T 13-10-2018 VEA_000503 38e5f78af5f5346de6a788bace9472f9 972 Pfam PF00873 AcrB/AcrD/AcrF family 1 952 2.2E-289 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_000503 38e5f78af5f5346de6a788bace9472f9 972 SUPERFAMILY SSF82866 221 422 4.97E-48 T 13-10-2018 VEA_000503 38e5f78af5f5346de6a788bace9472f9 972 SUPERFAMILY SSF82714 647 732 2.62E-21 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_000503 38e5f78af5f5346de6a788bace9472f9 972 Gene3D G3DSA:3.30.2090.10 102 199 1.5E-280 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_000503 38e5f78af5f5346de6a788bace9472f9 972 Gene3D G3DSA:3.30.2090.10 646 734 1.5E-280 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_000503 38e5f78af5f5346de6a788bace9472f9 972 SUPERFAMILY SSF82714 106 195 9.55E-23 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_000503 38e5f78af5f5346de6a788bace9472f9 972 SUPERFAMILY SSF82693 58 254 7.32E-22 T 13-10-2018 VEA_000503 38e5f78af5f5346de6a788bace9472f9 972 Gene3D G3DSA:1.20.1640.10 257 434 1.5E-280 T 13-10-2018 VEA_000503 38e5f78af5f5346de6a788bace9472f9 972 Gene3D G3DSA:3.30.70.1430 1 742 1.5E-280 T 13-10-2018 VEA_000503 38e5f78af5f5346de6a788bace9472f9 972 SUPERFAMILY SSF82693 1 54 7.32E-10 T 13-10-2018 VEA_000503 38e5f78af5f5346de6a788bace9472f9 972 Gene3D G3DSA:1.20.1640.10 435 949 1.5E-280 T 13-10-2018 VEA_000503 38e5f78af5f5346de6a788bace9472f9 972 SUPERFAMILY SSF82693 487 596 1.78E-22 T 13-10-2018 VEA_003095 049b2149fc50c6b524805dea436e4f69 188 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 188 5.5E-89 T 13-10-2018 IPR011897 Translation elongation factor P-like, YeiP VEA_003095 049b2149fc50c6b524805dea436e4f69 188 SMART SM01185 69 124 1.6E-13 T 13-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 VEA_003095 049b2149fc50c6b524805dea436e4f69 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 62 1.4E-17 T 13-10-2018 IPR013185 Translation elongation factor, KOW-like VEA_003095 049b2149fc50c6b524805dea436e4f69 188 SUPERFAMILY SSF50249 132 188 2.06E-14 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_003095 049b2149fc50c6b524805dea436e4f69 188 Pfam PF09285 Elongation factor P, C-terminal 132 187 8.1E-19 T 13-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 VEA_003095 049b2149fc50c6b524805dea436e4f69 188 Gene3D G3DSA:2.40.50.140 67 130 4.2E-15 T 13-10-2018 VEA_003095 049b2149fc50c6b524805dea436e4f69 188 Gene3D G3DSA:2.40.50.140 131 188 1.9E-19 T 13-10-2018 VEA_003095 049b2149fc50c6b524805dea436e4f69 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 4.4E-13 T 13-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 VEA_003095 049b2149fc50c6b524805dea436e4f69 188 Gene3D G3DSA:2.30.30.30 1 65 3.4E-15 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 VEA_003095 049b2149fc50c6b524805dea436e4f69 188 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 188 42.081 T 13-10-2018 IPR011897 Translation elongation factor P-like, YeiP VEA_003095 049b2149fc50c6b524805dea436e4f69 188 PIRSF PIRSF005901 1 188 1.4E-58 T 13-10-2018 IPR020599 Translation elongation factor P/YeiP VEA_003095 049b2149fc50c6b524805dea436e4f69 188 SUPERFAMILY SSF50249 67 129 4.71E-12 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_003095 049b2149fc50c6b524805dea436e4f69 188 SUPERFAMILY SSF50104 1 65 9.63E-12 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily VEA_003095 049b2149fc50c6b524805dea436e4f69 188 SMART SM00841 132 187 2.2E-25 T 13-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 VEA_003095 049b2149fc50c6b524805dea436e4f69 188 ProSitePatterns PS01275 Elongation factor P signature. 153 172 - T 13-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site VEA_001403 6206d662bbb191e5f63d6205126fb54f 308 Pfam PF00005 ABC transporter 22 165 1.2E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_001403 6206d662bbb191e5f63d6205126fb54f 308 Gene3D G3DSA:3.40.50.300 1 243 8.8E-72 T 13-10-2018 VEA_001403 6206d662bbb191e5f63d6205126fb54f 308 SUPERFAMILY SSF52540 4 227 2.0E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001403 6206d662bbb191e5f63d6205126fb54f 308 SMART SM00382 30 212 3.0E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_001403 6206d662bbb191e5f63d6205126fb54f 308 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_002006 815aea07a7b29f4eb6cf0057b2f69038 805 SMART SM00387 31 175 1.3E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_002006 815aea07a7b29f4eb6cf0057b2f69038 805 Gene3D G3DSA:3.30.565.10 1 220 7.5E-95 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_002006 815aea07a7b29f4eb6cf0057b2f69038 805 SUPERFAMILY SSF54211 221 393 7.4E-59 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEA_002006 815aea07a7b29f4eb6cf0057b2f69038 805 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 805 0.0 T 13-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VEA_002006 815aea07a7b29f4eb6cf0057b2f69038 805 PRINTS PR01159 DNA gyrase subunit B signature 313 329 5.2E-86 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VEA_002006 815aea07a7b29f4eb6cf0057b2f69038 805 PRINTS PR01159 DNA gyrase subunit B signature 5 15 5.2E-86 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VEA_002006 815aea07a7b29f4eb6cf0057b2f69038 805 PRINTS PR01159 DNA gyrase subunit B signature 180 195 5.2E-86 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VEA_002006 815aea07a7b29f4eb6cf0057b2f69038 805 PRINTS PR01159 DNA gyrase subunit B signature 471 480 5.2E-86 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VEA_002006 815aea07a7b29f4eb6cf0057b2f69038 805 PRINTS PR01159 DNA gyrase subunit B signature 758 770 5.2E-86 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VEA_002006 815aea07a7b29f4eb6cf0057b2f69038 805 PRINTS PR01159 DNA gyrase subunit B signature 195 208 5.2E-86 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VEA_002006 815aea07a7b29f4eb6cf0057b2f69038 805 PRINTS PR01159 DNA gyrase subunit B signature 243 261 5.2E-86 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VEA_002006 815aea07a7b29f4eb6cf0057b2f69038 805 PRINTS PR01159 DNA gyrase subunit B signature 220 242 5.2E-86 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VEA_002006 815aea07a7b29f4eb6cf0057b2f69038 805 PRINTS PR01159 DNA gyrase subunit B signature 774 790 5.2E-86 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VEA_002006 815aea07a7b29f4eb6cf0057b2f69038 805 PRINTS PR01159 DNA gyrase subunit B signature 375 395 5.2E-86 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VEA_002006 815aea07a7b29f4eb6cf0057b2f69038 805 PRINTS PR01159 DNA gyrase subunit B signature 361 375 5.2E-86 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VEA_002006 815aea07a7b29f4eb6cf0057b2f69038 805 Gene3D G3DSA:3.40.50.670 399 572 1.3E-75 T 13-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VEA_002006 815aea07a7b29f4eb6cf0057b2f69038 805 SUPERFAMILY SSF55874 4 212 5.5E-75 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_002006 815aea07a7b29f4eb6cf0057b2f69038 805 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 736 794 1.8E-29 T 13-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VEA_002006 815aea07a7b29f4eb6cf0057b2f69038 805 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 173 4.2E-22 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_002006 815aea07a7b29f4eb6cf0057b2f69038 805 Pfam PF01751 Toprim domain 420 532 8.5E-19 T 13-10-2018 IPR006171 TOPRIM domain VEA_002006 815aea07a7b29f4eb6cf0057b2f69038 805 Pfam PF00204 DNA gyrase B 221 391 1.3E-60 T 13-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VEA_002006 815aea07a7b29f4eb6cf0057b2f69038 805 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 805 108.37 T 13-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VEA_002006 815aea07a7b29f4eb6cf0057b2f69038 805 Gene3D G3DSA:3.30.230.10 221 393 5.1E-73 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VEA_002006 815aea07a7b29f4eb6cf0057b2f69038 805 ProSitePatterns PS00177 DNA topoisomerase II signature. 423 431 - T 13-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VEA_002006 815aea07a7b29f4eb6cf0057b2f69038 805 SUPERFAMILY SSF56719 395 796 7.85E-88 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VEA_002006 815aea07a7b29f4eb6cf0057b2f69038 805 SMART SM00433 35 798 9.8E-276 T 13-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VEA_002006 815aea07a7b29f4eb6cf0057b2f69038 805 Gene3D G3DSA:3.40.50.670 706 804 2.7E-26 T 13-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VEA_002006 815aea07a7b29f4eb6cf0057b2f69038 805 PRINTS PR00418 DNA topoisomerase II family signature 526 538 4.7E-70 T 13-10-2018 VEA_002006 815aea07a7b29f4eb6cf0057b2f69038 805 PRINTS PR00418 DNA topoisomerase II family signature 70 83 4.7E-70 T 13-10-2018 VEA_002006 815aea07a7b29f4eb6cf0057b2f69038 805 PRINTS PR00418 DNA topoisomerase II family signature 269 282 4.7E-70 T 13-10-2018 VEA_002006 815aea07a7b29f4eb6cf0057b2f69038 805 PRINTS PR00418 DNA topoisomerase II family signature 35 50 4.7E-70 T 13-10-2018 VEA_002006 815aea07a7b29f4eb6cf0057b2f69038 805 PRINTS PR00418 DNA topoisomerase II family signature 113 127 4.7E-70 T 13-10-2018 VEA_002006 815aea07a7b29f4eb6cf0057b2f69038 805 PRINTS PR00418 DNA topoisomerase II family signature 488 504 4.7E-70 T 13-10-2018 VEA_002006 815aea07a7b29f4eb6cf0057b2f69038 805 PRINTS PR00418 DNA topoisomerase II family signature 506 523 4.7E-70 T 13-10-2018 VEA_002006 815aea07a7b29f4eb6cf0057b2f69038 805 PRINTS PR00418 DNA topoisomerase II family signature 421 435 4.7E-70 T 13-10-2018 VEA_002006 815aea07a7b29f4eb6cf0057b2f69038 805 PRINTS PR00418 DNA topoisomerase II family signature 737 753 4.7E-70 T 13-10-2018 VEA_002006 815aea07a7b29f4eb6cf0057b2f69038 805 Gene3D G3DSA:3.10.20.690 593 684 4.7E-34 T 13-10-2018 VEA_004127 9fafaa4f94eb5ebc0742a09021236291 556 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEA_004127 9fafaa4f94eb5ebc0742a09021236291 556 Gene3D G3DSA:2.40.240.10 464 548 1.4E-34 T 13-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VEA_004127 9fafaa4f94eb5ebc0742a09021236291 556 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 550 54.394 T 13-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 VEA_004127 9fafaa4f94eb5ebc0742a09021236291 556 Gene3D G3DSA:2.40.240.10 348 463 6.0E-47 T 13-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VEA_004127 9fafaa4f94eb5ebc0742a09021236291 556 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 2.1E-126 T 13-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 VEA_004127 9fafaa4f94eb5ebc0742a09021236291 556 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 552 7.5E-300 T 13-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VEA_004127 9fafaa4f94eb5ebc0742a09021236291 556 SUPERFAMILY SSF50715 340 548 1.15E-80 T 13-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VEA_004127 9fafaa4f94eb5ebc0742a09021236291 556 Gene3D G3DSA:3.40.50.620 30 247 7.3E-106 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_004127 9fafaa4f94eb5ebc0742a09021236291 556 Gene3D G3DSA:3.90.800.10 101 209 7.3E-106 T 13-10-2018 VEA_004127 9fafaa4f94eb5ebc0742a09021236291 556 Gene3D G3DSA:1.10.1160.10 261 339 8.4E-37 T 13-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 VEA_004127 9fafaa4f94eb5ebc0742a09021236291 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 6.0E-10 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VEA_004127 9fafaa4f94eb5ebc0742a09021236291 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 6.0E-10 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VEA_004127 9fafaa4f94eb5ebc0742a09021236291 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 6.0E-10 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VEA_004127 9fafaa4f94eb5ebc0742a09021236291 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 6.0E-10 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VEA_004127 9fafaa4f94eb5ebc0742a09021236291 556 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 529 1.6E-63 T 13-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VEA_004127 9fafaa4f94eb5ebc0742a09021236291 556 SUPERFAMILY SSF52374 11 337 2.28E-102 T 13-10-2018 VEA_003445 181a131f9b30f67a813ebadc9d5a8f3e 149 Pfam PF17414 MatP C-terminal ribbon-helix-helix domain 88 147 2.3E-26 T 13-10-2018 IPR035375 MatP, C-terminal ribbon-helix-helix domain VEA_003445 181a131f9b30f67a813ebadc9d5a8f3e 149 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 134 5.0E-71 T 13-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 VEA_003445 181a131f9b30f67a813ebadc9d5a8f3e 149 Gene3D G3DSA:1.10.1220.10 98 149 3.2E-22 T 13-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 VEA_003445 181a131f9b30f67a813ebadc9d5a8f3e 149 Gene3D G3DSA:1.20.1270.380 1 89 9.3E-48 T 13-10-2018 IPR038339 MatP, N-terminal domain superfamily VEA_003445 181a131f9b30f67a813ebadc9d5a8f3e 149 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 30.022 T 13-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 VEA_003445 181a131f9b30f67a813ebadc9d5a8f3e 149 Pfam PF06303 MatP N-terminal domain 2 85 3.6E-42 T 13-10-2018 IPR035087 MatP, N-terminal VEA_001796 6427d90df630998532bb733b8a1722f7 310 Pfam PF07922 Glycosyltransferase family 52 59 293 4.5E-23 T 13-10-2018 IPR012477 Glycosyltransferase family 52 VEA_003701 6853849fd5236f8fbdcfc05287fac927 226 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 13 224 1.7E-74 T 13-10-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 VEA_003701 6853849fd5236f8fbdcfc05287fac927 226 SUPERFAMILY SSF53335 8 224 3.31E-57 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_003701 6853849fd5236f8fbdcfc05287fac927 226 Gene3D G3DSA:3.40.50.150 4 226 4.7E-64 T 13-10-2018 VEA_003701 6853849fd5236f8fbdcfc05287fac927 226 PIRSF PIRSF023956 11 226 1.2E-74 T 13-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 VEA_003701 6853849fd5236f8fbdcfc05287fac927 226 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 15 224 1.5E-79 T 13-10-2018 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 VEA_003701 6853849fd5236f8fbdcfc05287fac927 226 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 12 225 35.985 T 13-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 VEA_004056 ec0839a4ddfc7f2af43e79a8dc179d7d 402 Gene3D G3DSA:3.40.50.300 1 216 3.4E-72 T 13-10-2018 VEA_004056 ec0839a4ddfc7f2af43e79a8dc179d7d 402 SMART SM00487 20 221 9.2E-59 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEA_004056 ec0839a4ddfc7f2af43e79a8dc179d7d 402 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VEA_004056 ec0839a4ddfc7f2af43e79a8dc179d7d 402 SMART SM00490 257 338 3.1E-30 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_004056 ec0839a4ddfc7f2af43e79a8dc179d7d 402 Gene3D G3DSA:3.40.50.300 217 373 3.6E-45 T 13-10-2018 VEA_004056 ec0839a4ddfc7f2af43e79a8dc179d7d 402 Pfam PF00271 Helicase conserved C-terminal domain 233 338 1.7E-26 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_004056 ec0839a4ddfc7f2af43e79a8dc179d7d 402 Pfam PF00270 DEAD/DEAH box helicase 25 194 2.2E-47 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VEA_004056 ec0839a4ddfc7f2af43e79a8dc179d7d 402 SUPERFAMILY SSF52540 74 359 1.89E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002608 5bf1b5e3fd24b82ae6f4da816c82fe37 495 Gene3D G3DSA:3.30.300.20 199 277 2.3E-30 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta VEA_002608 5bf1b5e3fd24b82ae6f4da816c82fe37 495 SUPERFAMILY SSF47794 429 492 1.73E-16 T 13-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 VEA_002608 5bf1b5e3fd24b82ae6f4da816c82fe37 495 Gene3D G3DSA:1.10.150.20 352 421 1.9E-29 T 13-10-2018 VEA_002608 5bf1b5e3fd24b82ae6f4da816c82fe37 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 3.8E-8 T 13-10-2018 VEA_002608 5bf1b5e3fd24b82ae6f4da816c82fe37 495 Gene3D G3DSA:3.30.1480.10 1 129 4.0E-44 T 13-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 VEA_002608 5bf1b5e3fd24b82ae6f4da816c82fe37 495 Pfam PF13184 NusA-like KH domain 230 297 3.1E-27 T 13-10-2018 IPR025249 KH domain, NusA-like GO:0003723 VEA_002608 5bf1b5e3fd24b82ae6f4da816c82fe37 495 Gene3D G3DSA:2.40.50.140 135 198 6.0E-17 T 13-10-2018 VEA_002608 5bf1b5e3fd24b82ae6f4da816c82fe37 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 424 28.81 T 13-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 VEA_002608 5bf1b5e3fd24b82ae6f4da816c82fe37 495 Gene3D G3DSA:3.30.300.20 278 345 1.3E-24 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta VEA_002608 5bf1b5e3fd24b82ae6f4da816c82fe37 495 SUPERFAMILY SSF54814 279 342 2.75E-15 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 VEA_002608 5bf1b5e3fd24b82ae6f4da816c82fe37 495 SUPERFAMILY SSF47794 356 415 1.44E-16 T 13-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 VEA_002608 5bf1b5e3fd24b82ae6f4da816c82fe37 495 Pfam PF08529 NusA N-terminal domain 4 123 8.8E-36 T 13-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 VEA_002608 5bf1b5e3fd24b82ae6f4da816c82fe37 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 440 489 2.1E-18 T 13-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication VEA_002608 5bf1b5e3fd24b82ae6f4da816c82fe37 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 1.9E-21 T 13-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication VEA_002608 5bf1b5e3fd24b82ae6f4da816c82fe37 495 SUPERFAMILY SSF54814 201 278 7.85E-29 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 VEA_002608 5bf1b5e3fd24b82ae6f4da816c82fe37 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 4.3E-125 T 13-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 VEA_002608 5bf1b5e3fd24b82ae6f4da816c82fe37 495 SUPERFAMILY SSF50249 132 199 1.63E-16 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_002608 5bf1b5e3fd24b82ae6f4da816c82fe37 495 SMART SM00316 133 198 9.4E-6 T 13-10-2018 IPR022967 RNA-binding domain, S1 VEA_002608 5bf1b5e3fd24b82ae6f4da816c82fe37 495 SUPERFAMILY SSF69705 1 126 4.71E-41 T 13-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 VEA_002608 5bf1b5e3fd24b82ae6f4da816c82fe37 495 Gene3D G3DSA:1.10.150.20 431 490 1.0E-24 T 13-10-2018 VEA_002445 16b512687f99b264cea1e9ad400d9ea2 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 2.0E-39 T 13-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VEA_002445 16b512687f99b264cea1e9ad400d9ea2 90 SUPERFAMILY SSF111148 1 89 1.7E-40 T 13-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 VEA_002445 16b512687f99b264cea1e9ad400d9ea2 90 PIRSF PIRSF029827 1 90 1.5E-43 T 13-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VEA_002445 16b512687f99b264cea1e9ad400d9ea2 90 Gene3D G3DSA:1.10.3880.10 1 90 4.1E-39 T 13-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 VEA_002445 16b512687f99b264cea1e9ad400d9ea2 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 8.6E-42 T 13-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VEA_002445 16b512687f99b264cea1e9ad400d9ea2 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.339 T 13-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VEA_000356 f5ce2d28c2230a5a40efd8ec46805bbb 882 SMART SM00052 621 871 1.1E-88 T 13-10-2018 IPR001633 EAL domain VEA_000356 f5ce2d28c2230a5a40efd8ec46805bbb 882 SUPERFAMILY SSF55073 460 612 1.41E-15 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_000356 f5ce2d28c2230a5a40efd8ec46805bbb 882 Pfam PF05228 CHASE4 domain 35 190 7.5E-29 T 13-10-2018 IPR007892 CHASE4 VEA_000356 f5ce2d28c2230a5a40efd8ec46805bbb 882 Pfam PF00990 Diguanylate cyclase, GGDEF domain 455 601 1.2E-12 T 13-10-2018 IPR000160 GGDEF domain VEA_000356 f5ce2d28c2230a5a40efd8ec46805bbb 882 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 330 449 4.3E-8 T 13-10-2018 IPR000014 PAS domain VEA_000356 f5ce2d28c2230a5a40efd8ec46805bbb 882 Gene3D G3DSA:3.20.20.450 625 877 2.3E-82 T 13-10-2018 IPR035919 EAL domain superfamily VEA_000356 f5ce2d28c2230a5a40efd8ec46805bbb 882 SMART SM00267 443 611 5.3E-8 T 13-10-2018 IPR000160 GGDEF domain VEA_000356 f5ce2d28c2230a5a40efd8ec46805bbb 882 Pfam PF13426 PAS domain 345 440 1.7E-8 T 13-10-2018 IPR000014 PAS domain VEA_000356 f5ce2d28c2230a5a40efd8ec46805bbb 882 SMART SM00091 333 399 3.2E-6 T 13-10-2018 IPR000014 PAS domain VEA_000356 f5ce2d28c2230a5a40efd8ec46805bbb 882 Pfam PF00563 EAL domain 627 866 3.8E-68 T 13-10-2018 IPR001633 EAL domain VEA_000356 f5ce2d28c2230a5a40efd8ec46805bbb 882 SUPERFAMILY SSF55785 324 439 4.0E-13 T 13-10-2018 IPR035965 PAS domain superfamily VEA_000356 f5ce2d28c2230a5a40efd8ec46805bbb 882 Gene3D G3DSA:3.30.450.20 333 445 3.1E-13 T 13-10-2018 VEA_000356 f5ce2d28c2230a5a40efd8ec46805bbb 882 SUPERFAMILY SSF141868 627 876 1.7E-76 T 13-10-2018 IPR035919 EAL domain superfamily VEA_000356 f5ce2d28c2230a5a40efd8ec46805bbb 882 Gene3D G3DSA:3.30.70.270 454 624 3.0E-16 T 13-10-2018 VEA_003093 98a29eece3352a73845e1e7ff37148e0 312 Pfam PF01479 S4 domain 4 43 4.2E-11 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_003093 98a29eece3352a73845e1e7ff37148e0 312 SUPERFAMILY SSF55174 4 96 6.56E-12 T 13-10-2018 VEA_003093 98a29eece3352a73845e1e7ff37148e0 312 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 106 120 - T 13-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VEA_003093 98a29eece3352a73845e1e7ff37148e0 312 Gene3D G3DSA:3.30.70.1560 130 220 3.6E-49 T 13-10-2018 VEA_003093 98a29eece3352a73845e1e7ff37148e0 312 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 72 232 7.2E-55 T 13-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VEA_003093 98a29eece3352a73845e1e7ff37148e0 312 Gene3D G3DSA:3.30.70.580 70 228 3.6E-49 T 13-10-2018 VEA_003093 98a29eece3352a73845e1e7ff37148e0 312 SMART SM00363 3 61 8.0E-10 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_003093 98a29eece3352a73845e1e7ff37148e0 312 Gene3D G3DSA:3.10.290.10 1 59 2.3E-20 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VEA_003093 98a29eece3352a73845e1e7ff37148e0 312 Pfam PF00849 RNA pseudouridylate synthase 68 185 6.0E-17 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEA_003093 98a29eece3352a73845e1e7ff37148e0 312 SUPERFAMILY SSF55120 68 237 1.3E-42 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEA_002638 92729b7d329243be279c255e3ebff90e 316 Gene3D G3DSA:3.40.190.10 103 286 4.1E-46 T 13-10-2018 VEA_002638 92729b7d329243be279c255e3ebff90e 316 Gene3D G3DSA:3.40.190.10 163 259 4.1E-46 T 13-10-2018 VEA_002638 92729b7d329243be279c255e3ebff90e 316 Gene3D G3DSA:1.10.10.10 7 93 1.4E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_002638 92729b7d329243be279c255e3ebff90e 316 SUPERFAMILY SSF53850 95 292 1.99E-35 T 13-10-2018 VEA_002638 92729b7d329243be279c255e3ebff90e 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.0E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_002638 92729b7d329243be279c255e3ebff90e 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.0E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_002638 92729b7d329243be279c255e3ebff90e 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.0E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_002638 92729b7d329243be279c255e3ebff90e 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.6E-18 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_002638 92729b7d329243be279c255e3ebff90e 316 SUPERFAMILY SSF46785 4 86 1.19E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_002638 92729b7d329243be279c255e3ebff90e 316 Pfam PF03466 LysR substrate binding domain 95 289 1.4E-29 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_002859 240897db4f2fcc865686b0a504c8346c 925 Gene3D G3DSA:3.30.830.10 240 468 1.3E-72 T 13-10-2018 VEA_002859 240897db4f2fcc865686b0a504c8346c 925 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 42 65 - T 13-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 VEA_002859 240897db4f2fcc865686b0a504c8346c 925 Pfam PF00675 Insulinase (Peptidase family M16) 21 158 1.0E-39 T 13-10-2018 IPR011765 Peptidase M16, N-terminal VEA_002859 240897db4f2fcc865686b0a504c8346c 925 Gene3D G3DSA:3.30.830.10 618 877 8.9E-109 T 13-10-2018 VEA_002859 240897db4f2fcc865686b0a504c8346c 925 SUPERFAMILY SSF63411 703 909 7.33E-45 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VEA_002859 240897db4f2fcc865686b0a504c8346c 925 Pfam PF05193 Peptidase M16 inactive domain 182 354 5.4E-24 T 13-10-2018 IPR007863 Peptidase M16, C-terminal VEA_002859 240897db4f2fcc865686b0a504c8346c 925 Pfam PF05193 Peptidase M16 inactive domain 648 822 3.3E-8 T 13-10-2018 IPR007863 Peptidase M16, C-terminal VEA_002859 240897db4f2fcc865686b0a504c8346c 925 SUPERFAMILY SSF63411 4 226 1.08E-56 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VEA_002859 240897db4f2fcc865686b0a504c8346c 925 SUPERFAMILY SSF63411 470 694 3.33E-60 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VEA_002859 240897db4f2fcc865686b0a504c8346c 925 Pfam PF16187 Middle or third domain of peptidase_M16 366 641 5.7E-82 T 13-10-2018 IPR032632 Peptidase M16, middle/third domain VEA_002859 240897db4f2fcc865686b0a504c8346c 925 SUPERFAMILY SSF63411 232 468 1.24E-80 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VEA_002859 240897db4f2fcc865686b0a504c8346c 925 Gene3D G3DSA:3.30.830.10 470 852 8.9E-109 T 13-10-2018 VEA_002859 240897db4f2fcc865686b0a504c8346c 925 Gene3D G3DSA:3.30.830.10 1 228 2.1E-86 T 13-10-2018 VEA_000107 c5875ae661147d8d059ab987990ac4eb 706 ProSitePatterns PS00850 Glycine radical domain signature. 676 684 - T 13-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VEA_000107 c5875ae661147d8d059ab987990ac4eb 706 Gene3D G3DSA:3.20.70.20 121 687 6.7E-231 T 13-10-2018 VEA_000107 c5875ae661147d8d059ab987990ac4eb 706 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 115 705 3.7E-198 T 13-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 VEA_000107 c5875ae661147d8d059ab987990ac4eb 706 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 705 1.2E-179 T 13-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 VEA_000107 c5875ae661147d8d059ab987990ac4eb 706 Pfam PF03477 ATP cone domain 4 89 3.1E-22 T 13-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 VEA_000107 c5875ae661147d8d059ab987990ac4eb 706 SUPERFAMILY SSF51998 121 687 1.92E-192 T 13-10-2018 VEA_001286 bba3e5d92a5d618109aa701c6aacd102 344 SMART SM00388 119 187 7.0E-15 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_001286 bba3e5d92a5d618109aa701c6aacd102 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 300 318 4.9E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_001286 bba3e5d92a5d618109aa701c6aacd102 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 323 336 4.9E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_001286 bba3e5d92a5d618109aa701c6aacd102 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 284 294 4.9E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_001286 bba3e5d92a5d618109aa701c6aacd102 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 266 280 4.9E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_001286 bba3e5d92a5d618109aa701c6aacd102 344 SUPERFAMILY SSF47384 108 188 6.87E-14 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEA_001286 bba3e5d92a5d618109aa701c6aacd102 344 Pfam PF13493 Domain of unknown function (DUF4118) 11 114 6.4E-22 T 13-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain VEA_001286 bba3e5d92a5d618109aa701c6aacd102 344 SMART SM00387 229 339 2.3E-26 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_001286 bba3e5d92a5d618109aa701c6aacd102 344 SUPERFAMILY SSF55874 177 337 1.96E-31 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_001286 bba3e5d92a5d618109aa701c6aacd102 344 Gene3D G3DSA:1.20.120.620 6 108 4.4E-17 T 13-10-2018 IPR038318 KdpD, transmembrane domain superfamily VEA_001286 bba3e5d92a5d618109aa701c6aacd102 344 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 338 3.8E-18 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_001286 bba3e5d92a5d618109aa701c6aacd102 344 Gene3D G3DSA:1.10.287.130 109 190 4.7E-13 T 13-10-2018 VEA_001286 bba3e5d92a5d618109aa701c6aacd102 344 Gene3D G3DSA:3.30.565.10 191 343 9.8E-31 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_001286 bba3e5d92a5d618109aa701c6aacd102 344 Pfam PF00512 His Kinase A (phospho-acceptor) domain 126 187 9.0E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_000266 2d1d7561689c188cc33e01d55dd80e24 723 Hamap MF_01961 Catalase-peroxidase [katG]. 7 723 39.939 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VEA_000266 2d1d7561689c188cc33e01d55dd80e24 723 Gene3D G3DSA:1.10.520.10 433 723 4.2E-148 T 13-10-2018 VEA_000266 2d1d7561689c188cc33e01d55dd80e24 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 52 65 2.8E-54 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VEA_000266 2d1d7561689c188cc33e01d55dd80e24 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 67 92 2.8E-54 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VEA_000266 2d1d7561689c188cc33e01d55dd80e24 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 267 290 2.8E-54 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VEA_000266 2d1d7561689c188cc33e01d55dd80e24 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 478 504 2.8E-54 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VEA_000266 2d1d7561689c188cc33e01d55dd80e24 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 26 48 2.8E-54 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VEA_000266 2d1d7561689c188cc33e01d55dd80e24 723 PRINTS PR00458 Haem peroxidase superfamily signature 168 180 1.3E-16 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VEA_000266 2d1d7561689c188cc33e01d55dd80e24 723 PRINTS PR00458 Haem peroxidase superfamily signature 259 274 1.3E-16 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VEA_000266 2d1d7561689c188cc33e01d55dd80e24 723 PRINTS PR00458 Haem peroxidase superfamily signature 90 104 1.3E-16 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VEA_000266 2d1d7561689c188cc33e01d55dd80e24 723 PRINTS PR00458 Haem peroxidase superfamily signature 150 167 1.3E-16 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VEA_000266 2d1d7561689c188cc33e01d55dd80e24 723 PRINTS PR00458 Haem peroxidase superfamily signature 318 333 1.3E-16 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VEA_000266 2d1d7561689c188cc33e01d55dd80e24 723 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 11 723 0.0 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VEA_000266 2d1d7561689c188cc33e01d55dd80e24 723 Gene3D G3DSA:1.10.420.10 578 699 4.2E-148 T 13-10-2018 VEA_000266 2d1d7561689c188cc33e01d55dd80e24 723 Gene3D G3DSA:1.10.420.20 191 397 1.3E-217 T 13-10-2018 VEA_000266 2d1d7561689c188cc33e01d55dd80e24 723 Gene3D G3DSA:1.10.520.10 28 432 1.3E-217 T 13-10-2018 VEA_000266 2d1d7561689c188cc33e01d55dd80e24 723 Pfam PF00141 Peroxidase 70 398 6.6E-50 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VEA_000266 2d1d7561689c188cc33e01d55dd80e24 723 Pfam PF00141 Peroxidase 406 698 7.8E-36 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VEA_000266 2d1d7561689c188cc33e01d55dd80e24 723 ProSitePatterns PS00436 Peroxidases active site signature. 90 101 - T 13-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 VEA_000266 2d1d7561689c188cc33e01d55dd80e24 723 SUPERFAMILY SSF48113 432 722 2.95E-112 T 13-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 VEA_000266 2d1d7561689c188cc33e01d55dd80e24 723 SUPERFAMILY SSF48113 19 431 2.95E-152 T 13-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 VEA_001128 5b8580f8df36178af40fdc14f107f132 326 Pfam PF00581 Rhodanese-like domain 116 210 1.4E-8 T 13-10-2018 IPR001763 Rhodanese-like domain VEA_001128 5b8580f8df36178af40fdc14f107f132 326 Gene3D G3DSA:3.30.70.100 1 96 1.7E-33 T 13-10-2018 VEA_001128 5b8580f8df36178af40fdc14f107f132 326 Hamap MF_00469 UPF0176 protein YceA [yceA]. 2 254 45.362 T 13-10-2018 IPR020936 Uncharacterised protein family UPF0176 VEA_001128 5b8580f8df36178af40fdc14f107f132 326 Gene3D G3DSA:3.40.250.10 97 253 2.0E-52 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily VEA_001128 5b8580f8df36178af40fdc14f107f132 326 SUPERFAMILY SSF52821 94 240 1.65E-32 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily VEA_001128 5b8580f8df36178af40fdc14f107f132 326 SMART SM00450 113 214 7.8E-23 T 13-10-2018 IPR001763 Rhodanese-like domain VEA_003920 945c63c289f698f515339ba68eb2aae8 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 361 3.0E-108 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VEA_003920 945c63c289f698f515339ba68eb2aae8 378 PIRSF PIRSF000267 2 377 5.6E-123 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VEA_003920 945c63c289f698f515339ba68eb2aae8 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 3.4E-171 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VEA_000337 1e89cbca437d20c8128333ca6055e748 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 4.8E-6 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEA_000337 1e89cbca437d20c8128333ca6055e748 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 4.8E-6 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEA_000337 1e89cbca437d20c8128333ca6055e748 340 SUPERFAMILY SSF53822 61 332 1.21E-93 T 13-10-2018 IPR028082 Periplasmic binding protein-like I VEA_000337 1e89cbca437d20c8128333ca6055e748 340 Gene3D G3DSA:1.10.260.40 3 60 5.0E-22 T 13-10-2018 VEA_000337 1e89cbca437d20c8128333ca6055e748 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 46 3.2E-19 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEA_000337 1e89cbca437d20c8128333ca6055e748 340 SUPERFAMILY SSF47413 1 60 1.35E-15 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEA_000337 1e89cbca437d20c8128333ca6055e748 340 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 13-10-2018 VEA_000337 1e89cbca437d20c8128333ca6055e748 340 Gene3D G3DSA:3.40.50.2300 70 323 1.1E-87 T 13-10-2018 VEA_000337 1e89cbca437d20c8128333ca6055e748 340 SMART SM00354 1 72 6.3E-34 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEA_000337 1e89cbca437d20c8128333ca6055e748 340 Gene3D G3DSA:3.40.50.2300 162 291 1.1E-87 T 13-10-2018 VEA_000337 1e89cbca437d20c8128333ca6055e748 340 Pfam PF13377 Periplasmic binding protein-like domain 171 331 6.1E-42 T 13-10-2018 VEA_002947 c80ac422cdce0c90912b7593c25ecca5 916 Pfam PF12838 4Fe-4S dicluster domain 378 430 8.1E-8 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEA_002947 c80ac422cdce0c90912b7593c25ecca5 916 Gene3D G3DSA:1.10.1060.10 364 445 1.3E-11 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VEA_002947 c80ac422cdce0c90912b7593c25ecca5 916 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 140 283 5.3E-47 T 13-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEA_002947 c80ac422cdce0c90912b7593c25ecca5 916 Gene3D G3DSA:2.40.50.100 49 97 2.6E-5 T 13-10-2018 VEA_002947 c80ac422cdce0c90912b7593c25ecca5 916 Pfam PF10531 SLBB domain 296 345 2.9E-9 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEA_002947 c80ac422cdce0c90912b7593c25ecca5 916 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 767 250.545 T 13-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 VEA_002947 c80ac422cdce0c90912b7593c25ecca5 916 SUPERFAMILY SSF46548 336 446 9.07E-21 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VEA_002947 c80ac422cdce0c90912b7593c25ecca5 916 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 115 1.5E-34 T 13-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain VEA_002947 c80ac422cdce0c90912b7593c25ecca5 916 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 447 2.5E-190 T 13-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 VEA_002947 c80ac422cdce0c90912b7593c25ecca5 916 Gene3D G3DSA:3.40.50.11540 145 291 2.3E-12 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEA_002947 c80ac422cdce0c90912b7593c25ecca5 916 SUPERFAMILY SSF142019 95 302 8.11E-60 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEA_002947 c80ac422cdce0c90912b7593c25ecca5 916 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 417 428 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VEA_000826 6ff73f837899100f5a4311fdf10072ff 142 Gene3D G3DSA:2.40.70.10 3 133 9.2E-34 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily VEA_000826 6ff73f837899100f5a4311fdf10072ff 142 Pfam PF05618 Putative ATP-dependant zinc protease 6 138 5.1E-34 T 13-10-2018 VEA_000826 6ff73f837899100f5a4311fdf10072ff 142 SUPERFAMILY SSF50630 6 140 2.25E-42 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily VEA_003468 f4702d8c6e8d955e1328b2204ed9f898 206 Gene3D G3DSA:1.10.760.10 46 206 9.3E-72 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEA_003468 f4702d8c6e8d955e1328b2204ed9f898 206 SUPERFAMILY SSF46626 21 202 3.93E-28 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEA_003468 f4702d8c6e8d955e1328b2204ed9f898 206 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 9 187 1.5E-80 T 13-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO VEA_003468 f4702d8c6e8d955e1328b2204ed9f898 206 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 9 186 3.9E-81 T 13-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO VEA_004157 cba350321ca53b6cdd691264bcdfdc81 85 Gene3D G3DSA:3.30.1340.10 1 85 1.0E-32 T 13-10-2018 IPR035895 HPr-like superfamily VEA_004157 cba350321ca53b6cdd691264bcdfdc81 85 SUPERFAMILY SSF55594 1 82 2.09E-26 T 13-10-2018 IPR035895 HPr-like superfamily VEA_004157 cba350321ca53b6cdd691264bcdfdc81 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 13-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VEA_004157 cba350321ca53b6cdd691264bcdfdc81 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.7E-18 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like VEA_004157 cba350321ca53b6cdd691264bcdfdc81 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.7E-18 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like VEA_004157 cba350321ca53b6cdd691264bcdfdc81 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.7E-18 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like VEA_004157 cba350321ca53b6cdd691264bcdfdc81 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 1.8E-27 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like VEA_004157 cba350321ca53b6cdd691264bcdfdc81 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 6.1E-28 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like VEA_004157 cba350321ca53b6cdd691264bcdfdc81 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 13-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VEA_000831 6f5a41eb074b983159f8661fbd0b9382 696 Gene3D G3DSA:3.40.50.1820 35 688 8.7E-251 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_000831 6f5a41eb074b983159f8661fbd0b9382 696 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 605 620 3.5E-51 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VEA_000831 6f5a41eb074b983159f8661fbd0b9382 696 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 463 481 3.5E-51 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VEA_000831 6f5a41eb074b983159f8661fbd0b9382 696 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 623 645 3.5E-51 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VEA_000831 6f5a41eb074b983159f8661fbd0b9382 696 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 489 513 3.5E-51 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VEA_000831 6f5a41eb074b983159f8661fbd0b9382 696 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 517 536 3.5E-51 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VEA_000831 6f5a41eb074b983159f8661fbd0b9382 696 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 547 567 3.5E-51 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VEA_000831 6f5a41eb074b983159f8661fbd0b9382 696 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 17 418 9.1E-98 T 13-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 VEA_000831 6f5a41eb074b983159f8661fbd0b9382 696 SUPERFAMILY SSF50993 14 426 4.45E-95 T 13-10-2018 VEA_000831 6f5a41eb074b983159f8661fbd0b9382 696 SUPERFAMILY SSF53474 427 675 2.32E-41 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_000831 6f5a41eb074b983159f8661fbd0b9382 696 Gene3D G3DSA:2.130.10.120 86 420 8.7E-251 T 13-10-2018 VEA_000831 6f5a41eb074b983159f8661fbd0b9382 696 Pfam PF00326 Prolyl oligopeptidase family 479 695 3.1E-69 T 13-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 VEA_002504 5c156f666faad1b1c0878ce802497aa3 739 SMART SM00954 250 360 8.3E-64 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 VEA_002504 5c156f666faad1b1c0878ce802497aa3 739 SUPERFAMILY SSF55021 662 737 2.96E-9 T 13-10-2018 VEA_002504 5c156f666faad1b1c0878ce802497aa3 739 Pfam PF13328 HD domain 50 190 2.0E-35 T 13-10-2018 IPR003607 HD/PDEase domain VEA_002504 5c156f666faad1b1c0878ce802497aa3 739 SUPERFAMILY SSF109604 53 205 8.79E-42 T 13-10-2018 VEA_002504 5c156f666faad1b1c0878ce802497aa3 739 SUPERFAMILY SSF81271 395 461 7.41E-21 T 13-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VEA_002504 5c156f666faad1b1c0878ce802497aa3 739 Gene3D G3DSA:1.10.3210.10 48 205 3.9E-35 T 13-10-2018 VEA_002504 5c156f666faad1b1c0878ce802497aa3 739 Pfam PF02824 TGS domain 402 461 1.6E-20 T 13-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 VEA_002504 5c156f666faad1b1c0878ce802497aa3 739 Gene3D G3DSA:3.10.20.30 396 469 1.5E-30 T 13-10-2018 IPR012675 Beta-grasp domain superfamily VEA_002504 5c156f666faad1b1c0878ce802497aa3 739 SUPERFAMILY SSF81301 195 406 2.45E-61 T 13-10-2018 VEA_002504 5c156f666faad1b1c0878ce802497aa3 739 Gene3D G3DSA:3.30.70.260 660 739 3.9E-15 T 13-10-2018 VEA_002504 5c156f666faad1b1c0878ce802497aa3 739 Pfam PF13291 ACT domain 661 737 3.4E-15 T 13-10-2018 IPR002912 ACT domain VEA_002504 5c156f666faad1b1c0878ce802497aa3 739 Pfam PF04607 Region found in RelA / SpoT proteins 250 359 2.7E-36 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 VEA_002504 5c156f666faad1b1c0878ce802497aa3 739 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 64 737 2.2E-183 T 13-10-2018 IPR004811 RelA/SpoT family GO:0015969 VEA_002504 5c156f666faad1b1c0878ce802497aa3 739 Gene3D G3DSA:3.30.460.10 208 340 1.0E-48 T 13-10-2018 VEA_004214 2f6a6af0a1373d69673dff17832626ee 299 Pfam PF00571 CBS domain 75 132 2.5E-7 T 13-10-2018 IPR000644 CBS domain VEA_004214 2f6a6af0a1373d69673dff17832626ee 299 Pfam PF00571 CBS domain 145 195 1.6E-6 T 13-10-2018 IPR000644 CBS domain VEA_004214 2f6a6af0a1373d69673dff17832626ee 299 SMART SM00116 147 195 0.028 T 13-10-2018 IPR000644 CBS domain VEA_004214 2f6a6af0a1373d69673dff17832626ee 299 SMART SM00116 84 133 0.0058 T 13-10-2018 IPR000644 CBS domain VEA_004214 2f6a6af0a1373d69673dff17832626ee 299 SUPERFAMILY SSF56176 209 291 3.27E-23 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VEA_004214 2f6a6af0a1373d69673dff17832626ee 299 Gene3D G3DSA:3.30.465.10 204 296 2.9E-31 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 VEA_004214 2f6a6af0a1373d69673dff17832626ee 299 SMART SM01091 211 289 2.4E-30 T 13-10-2018 IPR005170 Transporter-associated domain VEA_004214 2f6a6af0a1373d69673dff17832626ee 299 Gene3D G3DSA:3.10.580.10 57 203 3.8E-54 T 13-10-2018 VEA_004214 2f6a6af0a1373d69673dff17832626ee 299 SUPERFAMILY SSF54631 65 206 2.02E-33 T 13-10-2018 VEA_004214 2f6a6af0a1373d69673dff17832626ee 299 Pfam PF03471 Transporter associated domain 212 287 3.3E-22 T 13-10-2018 IPR005170 Transporter-associated domain VEA_002637 55260a760a2c12c5c70d30c74ac793cb 696 SUPERFAMILY SSF54980 402 479 1.91E-20 T 13-10-2018 IPR035647 EF-G domain III/V-like VEA_002637 55260a760a2c12c5c70d30c74ac793cb 696 Pfam PF03144 Elongation factor Tu domain 2 322 389 3.1E-17 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VEA_002637 55260a760a2c12c5c70d30c74ac793cb 696 SUPERFAMILY SSF50447 262 400 1.9E-32 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VEA_002637 55260a760a2c12c5c70d30c74ac793cb 696 Pfam PF00679 Elongation factor G C-terminus 598 684 1.7E-29 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like VEA_002637 55260a760a2c12c5c70d30c74ac793cb 696 Hamap MF_00054_B Elongation factor G [fusA]. 3 689 101.976 T 13-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VEA_002637 55260a760a2c12c5c70d30c74ac793cb 696 SUPERFAMILY SSF52540 3 279 2.78E-98 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002637 55260a760a2c12c5c70d30c74ac793cb 696 PRINTS PR00315 GTP-binding elongation factor signature 9 22 1.1E-13 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_002637 55260a760a2c12c5c70d30c74ac793cb 696 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.1E-13 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_002637 55260a760a2c12c5c70d30c74ac793cb 696 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.1E-13 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_002637 55260a760a2c12c5c70d30c74ac793cb 696 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.1E-13 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_002637 55260a760a2c12c5c70d30c74ac793cb 696 Pfam PF14492 Elongation Factor G, domain II 402 475 1.0E-28 T 13-10-2018 VEA_002637 55260a760a2c12c5c70d30c74ac793cb 696 Gene3D G3DSA:3.30.230.10 482 685 1.5E-82 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VEA_002637 55260a760a2c12c5c70d30c74ac793cb 696 SUPERFAMILY SSF54980 599 689 7.19E-29 T 13-10-2018 IPR035647 EF-G domain III/V-like VEA_002637 55260a760a2c12c5c70d30c74ac793cb 696 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 690 1.6E-289 T 13-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VEA_002637 55260a760a2c12c5c70d30c74ac793cb 696 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site VEA_002637 55260a760a2c12c5c70d30c74ac793cb 696 Pfam PF03764 Elongation factor G, domain IV 477 595 3.8E-42 T 13-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VEA_002637 55260a760a2c12c5c70d30c74ac793cb 696 Gene3D G3DSA:3.40.50.300 1 292 6.6E-100 T 13-10-2018 VEA_002637 55260a760a2c12c5c70d30c74ac793cb 696 Gene3D G3DSA:3.30.70.870 431 481 2.0E-20 T 13-10-2018 VEA_002637 55260a760a2c12c5c70d30c74ac793cb 696 Gene3D G3DSA:2.40.30.10 293 414 2.6E-44 T 13-10-2018 VEA_002637 55260a760a2c12c5c70d30c74ac793cb 696 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 174 9.9E-24 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VEA_002637 55260a760a2c12c5c70d30c74ac793cb 696 SMART SM00889 478 596 4.3E-60 T 13-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VEA_002637 55260a760a2c12c5c70d30c74ac793cb 696 Pfam PF00009 Elongation factor Tu GTP binding domain 6 279 1.0E-59 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_002637 55260a760a2c12c5c70d30c74ac793cb 696 Gene3D G3DSA:3.30.70.240 602 672 1.5E-82 T 13-10-2018 VEA_002637 55260a760a2c12c5c70d30c74ac793cb 696 SMART SM00838 598 685 1.1E-47 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like VEA_002637 55260a760a2c12c5c70d30c74ac793cb 696 SUPERFAMILY SSF54211 477 596 1.29E-38 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEA_004469 c0a8109778a7203a6b47d280aa94a848 470 Gene3D G3DSA:3.50.50.60 250 398 4.9E-44 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_004469 c0a8109778a7203a6b47d280aa94a848 470 Gene3D G3DSA:1.10.1060.10 11 146 3.1E-35 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VEA_004469 c0a8109778a7203a6b47d280aa94a848 470 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 470 7.7E-251 T 13-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 VEA_004469 c0a8109778a7203a6b47d280aa94a848 470 SUPERFAMILY SSF46548 6 157 1.2E-40 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VEA_004469 c0a8109778a7203a6b47d280aa94a848 470 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 7.0E-39 T 13-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 VEA_004469 c0a8109778a7203a6b47d280aa94a848 470 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 1.1E-36 T 13-10-2018 VEA_004469 c0a8109778a7203a6b47d280aa94a848 470 PRINTS PR00419 Adrenodoxin reductase family signature 288 302 1.1E-36 T 13-10-2018 VEA_004469 c0a8109778a7203a6b47d280aa94a848 470 PRINTS PR00419 Adrenodoxin reductase family signature 322 335 1.1E-36 T 13-10-2018 VEA_004469 c0a8109778a7203a6b47d280aa94a848 470 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 1.1E-36 T 13-10-2018 VEA_004469 c0a8109778a7203a6b47d280aa94a848 470 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 1.1E-36 T 13-10-2018 VEA_004469 c0a8109778a7203a6b47d280aa94a848 470 SUPERFAMILY SSF51971 145 399 3.83E-69 T 13-10-2018 VEA_004469 c0a8109778a7203a6b47d280aa94a848 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 457 1.2E-22 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VEA_004469 c0a8109778a7203a6b47d280aa94a848 470 Gene3D G3DSA:3.50.50.60 147 249 5.5E-10 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_002847 393407f4285c3f46fa59b99d39899e71 184 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 177 3.2E-71 T 13-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 VEA_002847 393407f4285c3f46fa59b99d39899e71 184 Gene3D G3DSA:3.40.30.10 20 184 1.7E-45 T 13-10-2018 VEA_002847 393407f4285c3f46fa59b99d39899e71 184 ProSitePatterns PS00194 Thioredoxin family active site. 71 89 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VEA_002847 393407f4285c3f46fa59b99d39899e71 184 SUPERFAMILY SSF52833 46 178 6.69E-39 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VEA_002847 393407f4285c3f46fa59b99d39899e71 184 Pfam PF08534 Redoxin 41 164 1.9E-27 T 13-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 VEA_000607 dd5e921d6ca726cf236de0eddae9e526 223 Pfam PF12973 ChrR Cupin-like domain 18 108 3.3E-41 T 13-10-2018 IPR025979 ChrR-like cupin domain VEA_000607 dd5e921d6ca726cf236de0eddae9e526 223 Pfam PF12973 ChrR Cupin-like domain 126 211 4.0E-29 T 13-10-2018 IPR025979 ChrR-like cupin domain VEA_000607 dd5e921d6ca726cf236de0eddae9e526 223 SUPERFAMILY SSF51182 111 216 8.64E-27 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily VEA_000607 dd5e921d6ca726cf236de0eddae9e526 223 Gene3D G3DSA:2.60.120.10 1 215 2.2E-80 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VEA_000607 dd5e921d6ca726cf236de0eddae9e526 223 SUPERFAMILY SSF51182 2 128 6.91E-38 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily VEA_002168 be626520ea85999f320d5624563e5a1f 182 Gene3D G3DSA:2.30.30.30 123 181 3.0E-25 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 VEA_002168 be626520ea85999f320d5624563e5a1f 182 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 181 2.2E-70 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 VEA_002168 be626520ea85999f320d5624563e5a1f 182 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 6.8E-22 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 VEA_002168 be626520ea85999f320d5624563e5a1f 182 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 6.8E-22 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 VEA_002168 be626520ea85999f320d5624563e5a1f 182 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 6.8E-22 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 VEA_002168 be626520ea85999f320d5624563e5a1f 182 SUPERFAMILY SSF82679 6 116 4.58E-40 T 13-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VEA_002168 be626520ea85999f320d5624563e5a1f 182 SMART SM00738 6 115 1.0E-50 T 13-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VEA_002168 be626520ea85999f320d5624563e5a1f 182 SUPERFAMILY SSF50104 126 181 3.31E-19 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily VEA_002168 be626520ea85999f320d5624563e5a1f 182 Gene3D G3DSA:3.30.70.940 1 122 3.3E-47 T 13-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VEA_002168 be626520ea85999f320d5624563e5a1f 182 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 13-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site VEA_002168 be626520ea85999f320d5624563e5a1f 182 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 25.932 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 VEA_002168 be626520ea85999f320d5624563e5a1f 182 SMART SM00739 127 154 3.9E-4 T 13-10-2018 IPR005824 KOW VEA_002168 be626520ea85999f320d5624563e5a1f 182 Pfam PF02357 Transcription termination factor nusG 7 112 8.8E-27 T 13-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VEA_002168 be626520ea85999f320d5624563e5a1f 182 Pfam PF00467 KOW motif 131 162 4.8E-7 T 13-10-2018 IPR005824 KOW VEA_002232 c6ed0646ed22599296e7990d7a62b4d6 188 Gene3D G3DSA:2.40.50.140 130 188 5.5E-27 T 13-10-2018 VEA_002232 c6ed0646ed22599296e7990d7a62b4d6 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 48.98 T 13-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 VEA_002232 c6ed0646ed22599296e7990d7a62b4d6 188 SUPERFAMILY SSF50104 2 64 2.26E-20 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily VEA_002232 c6ed0646ed22599296e7990d7a62b4d6 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 4.5E-25 T 13-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 VEA_002232 c6ed0646ed22599296e7990d7a62b4d6 188 SMART SM01185 69 123 1.0E-25 T 13-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 VEA_002232 c6ed0646ed22599296e7990d7a62b4d6 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 1.5E-22 T 13-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 VEA_002232 c6ed0646ed22599296e7990d7a62b4d6 188 SMART SM00841 131 186 1.0E-30 T 13-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 VEA_002232 c6ed0646ed22599296e7990d7a62b4d6 188 SUPERFAMILY SSF50249 130 187 7.02E-18 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_002232 c6ed0646ed22599296e7990d7a62b4d6 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 13-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site VEA_002232 c6ed0646ed22599296e7990d7a62b4d6 188 PIRSF PIRSF005901 2 188 5.9E-64 T 13-10-2018 IPR020599 Translation elongation factor P/YeiP VEA_002232 c6ed0646ed22599296e7990d7a62b4d6 188 SUPERFAMILY SSF50249 70 128 2.14E-17 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_002232 c6ed0646ed22599296e7990d7a62b4d6 188 TIGRFAM TIGR00038 efp: translation elongation factor P 5 187 9.6E-77 T 13-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 VEA_002232 c6ed0646ed22599296e7990d7a62b4d6 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 61 3.4E-24 T 13-10-2018 IPR013185 Translation elongation factor, KOW-like VEA_002232 c6ed0646ed22599296e7990d7a62b4d6 188 Gene3D G3DSA:2.40.50.140 66 129 3.3E-29 T 13-10-2018 VEA_002232 c6ed0646ed22599296e7990d7a62b4d6 188 Gene3D G3DSA:2.30.30.30 1 64 9.0E-26 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 VEA_000309 71ad5dfa7195cbd4ddc261ef48472009 327 Gene3D G3DSA:3.40.50.300 1 208 6.9E-52 T 13-10-2018 VEA_000309 71ad5dfa7195cbd4ddc261ef48472009 327 SUPERFAMILY SSF52540 5 302 7.78E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000309 71ad5dfa7195cbd4ddc261ef48472009 327 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 38 170 1.1E-60 T 13-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 VEA_000309 71ad5dfa7195cbd4ddc261ef48472009 327 PIRSF PIRSF002849 1 327 2.7E-127 T 13-10-2018 VEA_000309 71ad5dfa7195cbd4ddc261ef48472009 327 Gene3D G3DSA:1.10.8.300 209 324 5.6E-35 T 13-10-2018 VEA_002804 b480bec0c60b8186dfb42205d9674272 377 PRINTS PR00207 Flagellin signature 37 54 1.5E-27 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VEA_002804 b480bec0c60b8186dfb42205d9674272 377 PRINTS PR00207 Flagellin signature 111 134 1.5E-27 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VEA_002804 b480bec0c60b8186dfb42205d9674272 377 PRINTS PR00207 Flagellin signature 76 95 1.5E-27 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VEA_002804 b480bec0c60b8186dfb42205d9674272 377 SUPERFAMILY SSF64518 5 376 1.7E-97 T 13-10-2018 VEA_002804 b480bec0c60b8186dfb42205d9674272 377 Gene3D G3DSA:2.30.220.10 192 242 7.2E-78 T 13-10-2018 VEA_002804 b480bec0c60b8186dfb42205d9674272 377 Gene3D G3DSA:1.20.58.1830 5 33 7.2E-78 T 13-10-2018 VEA_002804 b480bec0c60b8186dfb42205d9674272 377 Gene3D G3DSA:2.170.280.10 178 191 7.2E-78 T 13-10-2018 VEA_002804 b480bec0c60b8186dfb42205d9674272 377 Gene3D G3DSA:1.20.1330.10 45 177 7.2E-78 T 13-10-2018 VEA_002804 b480bec0c60b8186dfb42205d9674272 377 Gene3D G3DSA:1.10.8.410 325 376 8.0E-19 T 13-10-2018 VEA_002804 b480bec0c60b8186dfb42205d9674272 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 9.9E-45 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VEA_002804 b480bec0c60b8186dfb42205d9674272 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 293 376 3.7E-23 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VEA_002804 b480bec0c60b8186dfb42205d9674272 377 Pfam PF07196 Flagellin hook IN motif 204 246 3.3E-11 T 13-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VEA_003837 492615a0a5a9ee11a73bab281b82b972 460 SMART SM00840 341 402 1.2E-27 T 13-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 VEA_003837 492615a0a5a9ee11a73bab281b82b972 460 SUPERFAMILY SSF47323 316 459 2.48E-40 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEA_003837 492615a0a5a9ee11a73bab281b82b972 460 SUPERFAMILY SSF52374 1 313 3.75E-104 T 13-10-2018 VEA_003837 492615a0a5a9ee11a73bab281b82b972 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 3.6E-29 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VEA_003837 492615a0a5a9ee11a73bab281b82b972 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 3.6E-29 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VEA_003837 492615a0a5a9ee11a73bab281b82b972 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 3.6E-29 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VEA_003837 492615a0a5a9ee11a73bab281b82b972 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 3.6E-29 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VEA_003837 492615a0a5a9ee11a73bab281b82b972 460 Gene3D G3DSA:1.20.120.640 306 460 1.4E-51 T 13-10-2018 VEA_003837 492615a0a5a9ee11a73bab281b82b972 460 Gene3D G3DSA:3.40.50.620 1 305 5.9E-139 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_003837 492615a0a5a9ee11a73bab281b82b972 460 Pfam PF09190 DALR domain 341 402 1.1E-24 T 13-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 VEA_003837 492615a0a5a9ee11a73bab281b82b972 460 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 460 39.447 T 13-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 VEA_003837 492615a0a5a9ee11a73bab281b82b972 460 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 5.2E-142 T 13-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 VEA_003837 492615a0a5a9ee11a73bab281b82b972 460 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 459 6.4E-193 T 13-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 VEA_003114 3cb291e9ec12856cd5c2b1436e54f2f8 475 PIRSF PIRSF000243 28 474 5.2E-124 T 13-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 VEA_003114 3cb291e9ec12856cd5c2b1436e54f2f8 475 SUPERFAMILY SSF48695 36 470 6.51E-163 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily VEA_003114 3cb291e9ec12856cd5c2b1436e54f2f8 475 Pfam PF02335 Cytochrome c552 41 470 2.2E-177 T 13-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 VEA_003114 3cb291e9ec12856cd5c2b1436e54f2f8 475 Gene3D G3DSA:1.20.140.10 309 451 2.9E-185 T 13-10-2018 VEA_003114 3cb291e9ec12856cd5c2b1436e54f2f8 475 Gene3D G3DSA:1.10.1130.10 40 469 2.9E-185 T 13-10-2018 VEA_003114 3cb291e9ec12856cd5c2b1436e54f2f8 475 Hamap MF_01182 Cytochrome c-552 [nrfA]. 3 475 58.194 T 13-10-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 VEA_003114 3cb291e9ec12856cd5c2b1436e54f2f8 475 TIGRFAM TIGR03152 cyto_c552_HCOOH: formate-dependent cytochrome c nitrite reductase, c552 subunit 36 473 1.6E-247 T 13-10-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 VEA_004222 1e1c069d4ffaf3826d06de720cf04141 638 Gene3D G3DSA:3.30.1390.30 87 162 2.2E-53 T 13-10-2018 VEA_004222 1e1c069d4ffaf3826d06de720cf04141 638 SUPERFAMILY SSF56601 256 619 5.09E-97 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VEA_004222 1e1c069d4ffaf3826d06de720cf04141 638 SUPERFAMILY SSF56519 58 254 1.44E-55 T 13-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 VEA_004222 1e1c069d4ffaf3826d06de720cf04141 638 Pfam PF00905 Penicillin binding protein transpeptidase domain 273 617 6.0E-78 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VEA_004222 1e1c069d4ffaf3826d06de720cf04141 638 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 22 620 6.2E-242 T 13-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VEA_004222 1e1c069d4ffaf3826d06de720cf04141 638 Pfam PF03717 Penicillin-binding Protein dimerisation domain 66 241 6.4E-51 T 13-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 VEA_004222 1e1c069d4ffaf3826d06de720cf04141 638 Gene3D G3DSA:3.40.710.10 251 632 2.4E-95 T 13-10-2018 VEA_004222 1e1c069d4ffaf3826d06de720cf04141 638 Gene3D G3DSA:3.90.1310.10 66 250 2.2E-53 T 13-10-2018 VEA_004222 1e1c069d4ffaf3826d06de720cf04141 638 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 5 624 53.715 T 13-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VEA_001153 ef637a68aa20008712b00ba991de3e2c 170 Pfam PF10973 Protein of unknown function (DUF2799) 29 110 2.1E-24 T 13-10-2018 IPR021242 Protein of unknown function DUF2799 VEA_000112 72758c8d09b13771432e284263ae3ef5 227 Pfam PF05618 Putative ATP-dependant zinc protease 87 221 1.7E-43 T 13-10-2018 VEA_000112 72758c8d09b13771432e284263ae3ef5 227 SUPERFAMILY SSF50630 87 218 7.88E-42 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily VEA_000112 72758c8d09b13771432e284263ae3ef5 227 Gene3D G3DSA:2.40.70.10 85 211 2.2E-40 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily VEA_002746 9fc42ae7218fa3e10dc8d7ae1feaeda4 242 Pfam PF00318 Ribosomal protein S2 9 224 5.1E-94 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_002746 9fc42ae7218fa3e10dc8d7ae1feaeda4 242 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 13-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 VEA_002746 9fc42ae7218fa3e10dc8d7ae1feaeda4 242 SUPERFAMILY SSF52313 6 232 1.2E-95 T 13-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily VEA_002746 9fc42ae7218fa3e10dc8d7ae1feaeda4 242 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.072 T 13-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002746 9fc42ae7218fa3e10dc8d7ae1feaeda4 242 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 13-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 VEA_002746 9fc42ae7218fa3e10dc8d7ae1feaeda4 242 PRINTS PR00395 Ribosomal protein S2 signature 158 175 2.4E-37 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_002746 9fc42ae7218fa3e10dc8d7ae1feaeda4 242 PRINTS PR00395 Ribosomal protein S2 signature 37 46 2.4E-37 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_002746 9fc42ae7218fa3e10dc8d7ae1feaeda4 242 PRINTS PR00395 Ribosomal protein S2 signature 175 186 2.4E-37 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_002746 9fc42ae7218fa3e10dc8d7ae1feaeda4 242 PRINTS PR00395 Ribosomal protein S2 signature 196 210 2.4E-37 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_002746 9fc42ae7218fa3e10dc8d7ae1feaeda4 242 PRINTS PR00395 Ribosomal protein S2 signature 6 24 2.4E-37 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_002746 9fc42ae7218fa3e10dc8d7ae1feaeda4 242 PRINTS PR00395 Ribosomal protein S2 signature 87 104 2.4E-37 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_002746 9fc42ae7218fa3e10dc8d7ae1feaeda4 242 Gene3D G3DSA:3.40.50.10490 8 219 2.8E-92 T 13-10-2018 VEA_002746 9fc42ae7218fa3e10dc8d7ae1feaeda4 242 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 5.6E-108 T 13-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002746 9fc42ae7218fa3e10dc8d7ae1feaeda4 242 Gene3D G3DSA:1.10.287.610 103 150 2.8E-92 T 13-10-2018 VEA_002676 a86731b3bc25b10b102646ed0ad4e543 284 Gene3D G3DSA:1.20.1080.10 4 260 2.6E-96 T 13-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VEA_002676 a86731b3bc25b10b102646ed0ad4e543 284 TIGRFAM TIGR00861 MIP: MIP family channel proteins 15 252 1.1E-68 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VEA_002676 a86731b3bc25b10b102646ed0ad4e543 284 SUPERFAMILY SSF81338 9 254 7.19E-75 T 13-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VEA_002676 a86731b3bc25b10b102646ed0ad4e543 284 PRINTS PR00783 Major intrinsic protein family signature 87 106 5.6E-51 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VEA_002676 a86731b3bc25b10b102646ed0ad4e543 284 PRINTS PR00783 Major intrinsic protein family signature 153 171 5.6E-51 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VEA_002676 a86731b3bc25b10b102646ed0ad4e543 284 PRINTS PR00783 Major intrinsic protein family signature 11 30 5.6E-51 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VEA_002676 a86731b3bc25b10b102646ed0ad4e543 284 PRINTS PR00783 Major intrinsic protein family signature 235 255 5.6E-51 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VEA_002676 a86731b3bc25b10b102646ed0ad4e543 284 PRINTS PR00783 Major intrinsic protein family signature 50 74 5.6E-51 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VEA_002676 a86731b3bc25b10b102646ed0ad4e543 284 PRINTS PR00783 Major intrinsic protein family signature 186 208 5.6E-51 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VEA_002676 a86731b3bc25b10b102646ed0ad4e543 284 ProSitePatterns PS00221 MIP family signature. 68 76 - T 13-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 VEA_002676 a86731b3bc25b10b102646ed0ad4e543 284 Pfam PF00230 Major intrinsic protein 6 252 4.5E-64 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VEA_002967 206f4390f958c095658ee688290e2f9a 714 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 406 706 2.4E-132 T 13-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 VEA_002967 206f4390f958c095658ee688290e2f9a 714 Pfam PF01515 Phosphate acetyl/butaryl transferase 391 706 2.2E-125 T 13-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 VEA_002967 206f4390f958c095658ee688290e2f9a 714 Pfam PF13500 AAA domain 3 229 1.6E-51 T 13-10-2018 VEA_002967 206f4390f958c095658ee688290e2f9a 714 Pfam PF07085 DRTGG domain 233 344 7.8E-27 T 13-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 VEA_002967 206f4390f958c095658ee688290e2f9a 714 Gene3D G3DSA:3.40.50.10750 529 682 1.3E-133 T 13-10-2018 VEA_002967 206f4390f958c095658ee688290e2f9a 714 SUPERFAMILY SSF53659 392 709 1.27E-95 T 13-10-2018 VEA_002967 206f4390f958c095658ee688290e2f9a 714 SUPERFAMILY SSF52540 1 240 3.65E-29 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002967 206f4390f958c095658ee688290e2f9a 714 Gene3D G3DSA:3.40.50.10950 398 709 1.3E-133 T 13-10-2018 VEA_002967 206f4390f958c095658ee688290e2f9a 714 SUPERFAMILY SSF75138 229 353 1.23E-23 T 13-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily VEA_002967 206f4390f958c095658ee688290e2f9a 714 PIRSF PIRSF006107 1 714 0.0 T 13-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 VEA_002967 206f4390f958c095658ee688290e2f9a 714 Gene3D G3DSA:3.40.1390.20 225 365 1.7E-12 T 13-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily VEA_002967 206f4390f958c095658ee688290e2f9a 714 Gene3D G3DSA:3.40.50.300 5 217 3.9E-14 T 13-10-2018 VEA_003961 2be0d84a108945c9531f573c6d0a8212 225 Hamap MF_00789 UPF0319 protein YccT [yccT]. 5 224 23.435 T 13-10-2018 IPR018635 Uncharacterised protein family UPF0319 VEA_003961 2be0d84a108945c9531f573c6d0a8212 225 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 24 221 1.1E-42 T 13-10-2018 IPR018635 Uncharacterised protein family UPF0319 VEA_001139 1f88b7d2d7af3431892f91ee8be66ac6 254 Gene3D G3DSA:2.40.30.10 2 102 9.7E-24 T 13-10-2018 VEA_001139 1f88b7d2d7af3431892f91ee8be66ac6 254 SUPERFAMILY SSF52343 112 243 3.01E-34 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VEA_001139 1f88b7d2d7af3431892f91ee8be66ac6 254 SUPERFAMILY SSF63380 10 100 1.59E-18 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VEA_001139 1f88b7d2d7af3431892f91ee8be66ac6 254 Gene3D G3DSA:3.40.50.80 104 254 2.8E-37 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VEA_001139 1f88b7d2d7af3431892f91ee8be66ac6 254 Pfam PF00970 Oxidoreductase FAD-binding domain 21 95 4.2E-6 T 13-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VEA_001139 1f88b7d2d7af3431892f91ee8be66ac6 254 Pfam PF00175 Oxidoreductase NAD-binding domain 118 228 8.7E-18 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VEA_002502 69e87bc885adbd928eeb675b743d9de9 932 SUPERFAMILY SSF52172 533 644 7.47E-8 T 13-10-2018 IPR011006 CheY-like superfamily VEA_002502 69e87bc885adbd928eeb675b743d9de9 932 SMART SM00073 829 927 2.9E-9 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VEA_002502 69e87bc885adbd928eeb675b743d9de9 932 Gene3D G3DSA:3.40.50.2300 669 793 1.1E-39 T 13-10-2018 VEA_002502 69e87bc885adbd928eeb675b743d9de9 932 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 175 5.4E-53 T 13-10-2018 IPR019247 Histidine kinase BarA, N-terminal VEA_002502 69e87bc885adbd928eeb675b743d9de9 932 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 402 516 1.2E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_002502 69e87bc885adbd928eeb675b743d9de9 932 SUPERFAMILY SSF55874 344 516 3.67E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_002502 69e87bc885adbd928eeb675b743d9de9 932 SMART SM00387 402 518 1.4E-37 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_002502 69e87bc885adbd928eeb675b743d9de9 932 SMART SM00388 290 355 2.9E-24 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_002502 69e87bc885adbd928eeb675b743d9de9 932 Gene3D G3DSA:1.10.287.130 276 356 6.6E-27 T 13-10-2018 VEA_002502 69e87bc885adbd928eeb675b743d9de9 932 SUPERFAMILY SSF47384 275 356 9.61E-23 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEA_002502 69e87bc885adbd928eeb675b743d9de9 932 SMART SM00304 198 250 3.1E-6 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_002502 69e87bc885adbd928eeb675b743d9de9 932 Pfam PF00512 His Kinase A (phospho-acceptor) domain 291 355 3.5E-20 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_002502 69e87bc885adbd928eeb675b743d9de9 932 SUPERFAMILY SSF158472 200 247 1.06E-6 T 13-10-2018 VEA_002502 69e87bc885adbd928eeb675b743d9de9 932 Pfam PF01627 Hpt domain 839 918 1.8E-11 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VEA_002502 69e87bc885adbd928eeb675b743d9de9 932 Gene3D G3DSA:3.30.565.10 357 521 3.8E-51 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_002502 69e87bc885adbd928eeb675b743d9de9 932 SUPERFAMILY SSF52172 667 784 1.31E-36 T 13-10-2018 IPR011006 CheY-like superfamily VEA_002502 69e87bc885adbd928eeb675b743d9de9 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 471 4.2E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_002502 69e87bc885adbd928eeb675b743d9de9 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 457 4.2E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_002502 69e87bc885adbd928eeb675b743d9de9 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 496 4.2E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_002502 69e87bc885adbd928eeb675b743d9de9 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 515 4.2E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_002502 69e87bc885adbd928eeb675b743d9de9 932 SMART SM00448 668 781 5.9E-37 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_002502 69e87bc885adbd928eeb675b743d9de9 932 Gene3D G3DSA:1.20.1480.50 164 270 1.5E-7 T 13-10-2018 VEA_002502 69e87bc885adbd928eeb675b743d9de9 932 SUPERFAMILY SSF47226 764 919 4.71E-22 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 VEA_002502 69e87bc885adbd928eeb675b743d9de9 932 Gene3D G3DSA:1.20.120.160 818 932 1.3E-30 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 VEA_002502 69e87bc885adbd928eeb675b743d9de9 932 Pfam PF00072 Response regulator receiver domain 670 780 2.2E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_002997 dae02ea0c2d3fe185e3522afe4186eaa 77 SUPERFAMILY SSF47336 2 76 1.2E-23 T 13-10-2018 IPR036736 ACP-like superfamily VEA_002997 dae02ea0c2d3fe185e3522afe4186eaa 77 Pfam PF00550 Phosphopantetheine attachment site 6 73 2.2E-16 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain VEA_002997 dae02ea0c2d3fe185e3522afe4186eaa 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 13-10-2018 IPR006162 Phosphopantetheine attachment site VEA_002997 dae02ea0c2d3fe185e3522afe4186eaa 77 Gene3D G3DSA:1.10.1200.10 1 76 1.9E-30 T 13-10-2018 IPR036736 ACP-like superfamily VEA_002997 dae02ea0c2d3fe185e3522afe4186eaa 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 6.6E-37 T 13-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 VEA_002997 dae02ea0c2d3fe185e3522afe4186eaa 77 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.938 T 13-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 VEA_001935 e910519a863b99dd6e6d0ece4c72a7fc 145 Gene3D G3DSA:1.20.1260.10 2 142 5.2E-10 T 13-10-2018 IPR012347 Ferritin-like VEA_001935 e910519a863b99dd6e6d0ece4c72a7fc 145 Pfam PF09537 Domain of unknown function (DUF2383) 4 112 4.6E-19 T 13-10-2018 IPR019052 Domain of unknown function DUF2383 VEA_001766 844b230dfb0cb39419d39ee9f244bd0c 212 Gene3D G3DSA:3.40.50.20 1 83 3.4E-20 T 13-10-2018 VEA_001766 844b230dfb0cb39419d39ee9f244bd0c 212 SUPERFAMILY SSF51161 4 210 6.93E-38 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily VEA_001766 844b230dfb0cb39419d39ee9f244bd0c 212 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 119 154 6.6E-5 T 13-10-2018 IPR001451 Hexapeptide repeat VEA_001766 844b230dfb0cb39419d39ee9f244bd0c 212 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 5 204 3.5E-64 T 13-10-2018 IPR020019 Sialic acid O-acyltransferase NeuD-like VEA_001766 844b230dfb0cb39419d39ee9f244bd0c 212 Gene3D G3DSA:2.160.10.10 84 211 9.3E-29 T 13-10-2018 VEA_001766 844b230dfb0cb39419d39ee9f244bd0c 212 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 164 192 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VEA_002404 c31514d3418aa0027da7340c872c6995 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_002404 c31514d3418aa0027da7340c872c6995 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 241 6.4E-126 T 13-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 VEA_002404 c31514d3418aa0027da7340c872c6995 241 Gene3D G3DSA:3.40.50.300 2 241 2.0E-72 T 13-10-2018 VEA_002404 c31514d3418aa0027da7340c872c6995 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 5.0E-9 T 13-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal VEA_002404 c31514d3418aa0027da7340c872c6995 241 SUPERFAMILY SSF52540 3 237 1.09E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002404 c31514d3418aa0027da7340c872c6995 241 Pfam PF00005 ABC transporter 20 166 1.4E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_002404 c31514d3418aa0027da7340c872c6995 241 SMART SM00382 28 231 4.1E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_004300 f073fb3466c4b8aef35bdb1f415dc91f 161 Hamap MF_00023 SsrA-binding protein [smpB]. 1 161 68.802 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 VEA_004300 f073fb3466c4b8aef35bdb1f415dc91f 161 TIGRFAM TIGR00086 smpB: SsrA-binding protein 15 157 5.6E-52 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 VEA_004300 f073fb3466c4b8aef35bdb1f415dc91f 161 SUPERFAMILY SSF74982 8 139 8.24E-48 T 13-10-2018 IPR023620 Small protein B VEA_004300 f073fb3466c4b8aef35bdb1f415dc91f 161 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 15 139 8.0E-68 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 VEA_004300 f073fb3466c4b8aef35bdb1f415dc91f 161 Pfam PF01668 SmpB protein 15 157 3.1E-55 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 VEA_004300 f073fb3466c4b8aef35bdb1f415dc91f 161 ProSitePatterns PS01317 SsrA-binding protein. 33 45 - T 13-10-2018 IPR020081 SsrA-binding protein, conserved site VEA_004300 f073fb3466c4b8aef35bdb1f415dc91f 161 Gene3D G3DSA:2.40.280.10 7 136 1.3E-43 T 13-10-2018 IPR023620 Small protein B VEA_000371 59be43b0866098cb89189f60320b38d5 394 SUPERFAMILY SSF52096 36 360 6.97E-56 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEA_000371 59be43b0866098cb89189f60320b38d5 394 Gene3D G3DSA:3.90.226.10 22 389 3.2E-115 T 13-10-2018 VEA_000371 59be43b0866098cb89189f60320b38d5 394 Pfam PF16113 Enoyl-CoA hydratase/isomerase 36 374 2.9E-106 T 13-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 VEA_000998 95261a197499269eb006ebe762f5ec61 305 Gene3D G3DSA:1.10.10.10 6 90 1.7E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000998 95261a197499269eb006ebe762f5ec61 305 Pfam PF03466 LysR substrate binding domain 91 297 1.4E-34 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_000998 95261a197499269eb006ebe762f5ec61 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 64 5.6E-15 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000998 95261a197499269eb006ebe762f5ec61 305 SUPERFAMILY SSF46785 10 112 2.51E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000998 95261a197499269eb006ebe762f5ec61 305 Gene3D G3DSA:3.40.190.290 92 298 1.7E-47 T 13-10-2018 VEA_000998 95261a197499269eb006ebe762f5ec61 305 SUPERFAMILY SSF53850 91 299 1.19E-36 T 13-10-2018 VEA_001285 97ef2d590e0312c2009618947977610d 603 SUPERFAMILY SSF90123 16 319 4.05E-47 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEA_001285 97ef2d590e0312c2009618947977610d 603 SUPERFAMILY SSF52540 337 587 1.51E-89 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001285 97ef2d590e0312c2009618947977610d 603 SMART SM00382 372 563 1.4E-19 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_001285 97ef2d590e0312c2009618947977610d 603 Pfam PF00005 ABC transporter 364 517 4.6E-37 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_001285 97ef2d590e0312c2009618947977610d 603 Pfam PF00664 ABC transporter transmembrane region 26 294 3.4E-16 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VEA_001285 97ef2d590e0312c2009618947977610d 603 Gene3D G3DSA:3.40.50.300 337 594 2.4E-92 T 13-10-2018 VEA_001285 97ef2d590e0312c2009618947977610d 603 ProSitePatterns PS00211 ABC transporters family signature. 489 503 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_001285 97ef2d590e0312c2009618947977610d 603 Gene3D G3DSA:1.20.1560.10 2 322 6.8E-23 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEA_001330 f04ce3f1c9ea9badb4048cd5d4c282a3 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 285 8.3E-19 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_001330 f04ce3f1c9ea9badb4048cd5d4c282a3 296 SUPERFAMILY SSF161098 10 296 1.5E-69 T 13-10-2018 IPR035906 MetI-like superfamily VEA_001330 f04ce3f1c9ea9badb4048cd5d4c282a3 296 Gene3D G3DSA:1.10.3720.10 1 283 4.4E-74 T 13-10-2018 IPR035906 MetI-like superfamily VEA_001121 4f6e500664c2d0e8c3ef32b6597c6bc2 240 PIRSF PIRSF005426 1 240 3.3E-87 T 13-10-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 VEA_001121 4f6e500664c2d0e8c3ef32b6597c6bc2 240 SUPERFAMILY SSF55469 1 238 1.31E-75 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VEA_001121 4f6e500664c2d0e8c3ef32b6597c6bc2 240 Gene3D G3DSA:3.40.109.10 1 240 8.0E-80 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VEA_001121 4f6e500664c2d0e8c3ef32b6597c6bc2 240 Pfam PF00881 Nitroreductase family 8 159 2.0E-24 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 VEA_002375 f386358f0c4b0a73258d50f34dcd89ac 168 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 2.3E-9 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEA_002375 f386358f0c4b0a73258d50f34dcd89ac 168 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEA_002375 f386358f0c4b0a73258d50f34dcd89ac 168 SUPERFAMILY SSF54523 7 95 9.42E-13 T 13-10-2018 VEA_002375 f386358f0c4b0a73258d50f34dcd89ac 168 Gene3D G3DSA:3.30.700.10 7 168 1.0E-10 T 13-10-2018 VEA_002375 f386358f0c4b0a73258d50f34dcd89ac 168 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 8.2E-8 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEA_000298 bab4d69fdab0f9d2a57480f6a9e3cfdc 537 Pfam PF08774 VRR-NUC domain 430 535 6.9E-24 T 13-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 VEA_000298 bab4d69fdab0f9d2a57480f6a9e3cfdc 537 SMART SM00990 434 536 4.8E-21 T 13-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 VEA_000298 bab4d69fdab0f9d2a57480f6a9e3cfdc 537 Gene3D G3DSA:3.40.1350.10 465 537 7.8E-10 T 13-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 VEA_001659 f1394ba45855966cbad07b58312f426e 200 Gene3D G3DSA:3.20.19.10 1 180 4.5E-77 T 13-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 VEA_001659 f1394ba45855966cbad07b58312f426e 200 SUPERFAMILY SSF52016 1 196 3.34E-60 T 13-10-2018 VEA_001659 f1394ba45855966cbad07b58312f426e 200 Pfam PF00694 Aconitase C-terminal domain 1 125 3.1E-39 T 13-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 VEA_001659 f1394ba45855966cbad07b58312f426e 200 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 6.9E-98 T 13-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 VEA_001659 f1394ba45855966cbad07b58312f426e 200 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 44.046 T 13-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 VEA_001244 c89cb4f316a0b7e342185d35224c4f50 376 Gene3D G3DSA:2.40.50.100 64 256 4.1E-34 T 13-10-2018 VEA_001244 c89cb4f316a0b7e342185d35224c4f50 376 SUPERFAMILY SSF111369 63 114 4.32E-6 T 13-10-2018 VEA_001244 c89cb4f316a0b7e342185d35224c4f50 376 Pfam PF13533 Biotin-lipoyl like 63 111 2.7E-10 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VEA_001244 c89cb4f316a0b7e342185d35224c4f50 376 SUPERFAMILY SSF111369 124 276 6.15E-7 T 13-10-2018 VEA_001244 c89cb4f316a0b7e342185d35224c4f50 376 Gene3D G3DSA:1.10.287.470 96 219 4.1E-34 T 13-10-2018 VEA_001244 c89cb4f316a0b7e342185d35224c4f50 376 Gene3D G3DSA:2.40.30.170 257 341 4.1E-34 T 13-10-2018 VEA_001749 562e5097f8c1f27ab27543c184d422ba 443 Gene3D G3DSA:1.10.8.60 335 440 8.7E-40 T 13-10-2018 VEA_001749 562e5097f8c1f27ab27543c184d422ba 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 3.4E-223 T 13-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 VEA_001749 562e5097f8c1f27ab27543c184d422ba 443 SMART SM00382 49 332 5.9E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_001749 562e5097f8c1f27ab27543c184d422ba 443 SUPERFAMILY SSF52540 3 441 4.75E-95 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001749 562e5097f8c1f27ab27543c184d422ba 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 171 329 5.7E-43 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VEA_001749 562e5097f8c1f27ab27543c184d422ba 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 43.218 T 13-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 VEA_001749 562e5097f8c1f27ab27543c184d422ba 443 SMART SM01086 335 429 1.7E-20 T 13-10-2018 IPR019489 Clp ATPase, C-terminal VEA_001749 562e5097f8c1f27ab27543c184d422ba 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 103 8.7E-7 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VEA_002051 1eb393b845fb243811db1ead36a81469 217 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 13 213 2.5E-68 T 13-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 VEA_002051 1eb393b845fb243811db1ead36a81469 217 Pfam PF03006 Haemolysin-III related 10 207 1.5E-38 T 13-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 VEA_004042 84758574674752d4a715aa0481000a0e 783 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 196 1.3E-40 T 13-10-2018 IPR003111 Lon, substrate-binding domain VEA_004042 84758574674752d4a715aa0481000a0e 783 SMART SM00382 347 491 1.4E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_004042 84758574674752d4a715aa0481000a0e 783 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 351 488 3.1E-17 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VEA_004042 84758574674752d4a715aa0481000a0e 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 355 374 2.3E-56 T 13-10-2018 VEA_004042 84758574674752d4a715aa0481000a0e 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 672 691 2.3E-56 T 13-10-2018 VEA_004042 84758574674752d4a715aa0481000a0e 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 702 721 2.3E-56 T 13-10-2018 VEA_004042 84758574674752d4a715aa0481000a0e 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 594 610 2.3E-56 T 13-10-2018 VEA_004042 84758574674752d4a715aa0481000a0e 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 725 743 2.3E-56 T 13-10-2018 VEA_004042 84758574674752d4a715aa0481000a0e 783 SUPERFAMILY SSF88697 10 200 2.36E-48 T 13-10-2018 IPR015947 PUA-like superfamily VEA_004042 84758574674752d4a715aa0481000a0e 783 PIRSF PIRSF001174 1 774 0.0 T 13-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 VEA_004042 84758574674752d4a715aa0481000a0e 783 Gene3D G3DSA:2.30.130.40 1 116 1.7E-35 T 13-10-2018 VEA_004042 84758574674752d4a715aa0481000a0e 783 SMART SM00464 10 201 5.1E-77 T 13-10-2018 IPR003111 Lon, substrate-binding domain VEA_004042 84758574674752d4a715aa0481000a0e 783 TIGRFAM TIGR00763 lon: endopeptidase La 12 770 0.0 T 13-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 VEA_004042 84758574674752d4a715aa0481000a0e 783 SUPERFAMILY SSF52540 312 586 3.56E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_004042 84758574674752d4a715aa0481000a0e 783 Gene3D G3DSA:3.40.50.300 312 489 6.9E-61 T 13-10-2018 VEA_004042 84758574674752d4a715aa0481000a0e 783 Gene3D G3DSA:1.20.58.1480 119 244 3.3E-44 T 13-10-2018 VEA_004042 84758574674752d4a715aa0481000a0e 783 Gene3D G3DSA:1.10.8.60 490 583 6.8E-34 T 13-10-2018 VEA_004042 84758574674752d4a715aa0481000a0e 783 Gene3D G3DSA:3.30.230.10 584 771 3.9E-86 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VEA_004042 84758574674752d4a715aa0481000a0e 783 Hamap MF_01973 Lon protease [lon]. 11 771 72.14 T 13-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 VEA_004042 84758574674752d4a715aa0481000a0e 783 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 569 771 2.0E-100 T 13-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 VEA_004042 84758574674752d4a715aa0481000a0e 783 SUPERFAMILY SSF54211 594 769 1.25E-59 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEA_001370 60a3c807758a81b99f3f3510eeff5e75 287 Gene3D G3DSA:3.90.226.10 25 285 1.1E-80 T 13-10-2018 VEA_001370 60a3c807758a81b99f3f3510eeff5e75 287 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 35.709 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VEA_001370 60a3c807758a81b99f3f3510eeff5e75 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 1.1E-34 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VEA_001370 60a3c807758a81b99f3f3510eeff5e75 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 1.1E-34 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VEA_001370 60a3c807758a81b99f3f3510eeff5e75 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 1.1E-34 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VEA_001370 60a3c807758a81b99f3f3510eeff5e75 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 1.1E-34 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VEA_001370 60a3c807758a81b99f3f3510eeff5e75 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 1.1E-34 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VEA_001370 60a3c807758a81b99f3f3510eeff5e75 287 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 282 1.7E-130 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VEA_001370 60a3c807758a81b99f3f3510eeff5e75 287 Pfam PF01039 Carboxyl transferase domain 100 242 8.1E-15 T 13-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 VEA_001370 60a3c807758a81b99f3f3510eeff5e75 287 SUPERFAMILY SSF52096 25 284 5.64E-82 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEA_001097 c686a154a4c38b894311ad68d38c7015 358 Pfam PF03193 RsgA GTPase 91 263 1.7E-49 T 13-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 VEA_001097 c686a154a4c38b894311ad68d38c7015 358 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 40 327 31.432 T 13-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 VEA_001097 c686a154a4c38b894311ad68d38c7015 358 Gene3D G3DSA:1.10.40.50 267 337 3.7E-21 T 13-10-2018 VEA_001097 c686a154a4c38b894311ad68d38c7015 358 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 74 320 3.6E-49 T 13-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 VEA_001097 c686a154a4c38b894311ad68d38c7015 358 SUPERFAMILY SSF52540 108 324 5.21E-50 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001097 c686a154a4c38b894311ad68d38c7015 358 Gene3D G3DSA:3.40.50.300 94 263 5.7E-45 T 13-10-2018 VEA_003726 4a6c7b9861ce29220b057d4a57e36a88 1011 Gene3D G3DSA:3.30.465.40 17 208 4.8E-48 T 13-10-2018 VEA_003726 4a6c7b9861ce29220b057d4a57e36a88 1011 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 667 678 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VEA_003726 4a6c7b9861ce29220b057d4a57e36a88 1011 Pfam PF02913 FAD linked oxidases, C-terminal domain 276 534 4.4E-62 T 13-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 VEA_003726 4a6c7b9861ce29220b057d4a57e36a88 1011 Pfam PF13183 4Fe-4S dicluster domain 570 681 5.0E-12 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEA_003726 4a6c7b9861ce29220b057d4a57e36a88 1011 SUPERFAMILY SSF46548 516 685 4.32E-7 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VEA_003726 4a6c7b9861ce29220b057d4a57e36a88 1011 SUPERFAMILY SSF55103 252 538 1.11E-53 T 13-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 VEA_003726 4a6c7b9861ce29220b057d4a57e36a88 1011 Pfam PF01565 FAD binding domain 52 191 4.0E-36 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 VEA_003726 4a6c7b9861ce29220b057d4a57e36a88 1011 SUPERFAMILY SSF56176 29 277 6.18E-51 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VEA_001305 a702a2c8dd2afd4db4e58a274624e9d3 635 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 5 131 8.4E-42 T 13-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 VEA_001305 a702a2c8dd2afd4db4e58a274624e9d3 635 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 278 620 6.2E-87 T 13-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 VEA_001305 a702a2c8dd2afd4db4e58a274624e9d3 635 SUPERFAMILY SSF55804 1 145 2.22E-37 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VEA_001305 a702a2c8dd2afd4db4e58a274624e9d3 635 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 167 255 1.4E-15 T 13-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VEA_001305 a702a2c8dd2afd4db4e58a274624e9d3 635 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 165 247 3.1E-31 T 13-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 VEA_001305 a702a2c8dd2afd4db4e58a274624e9d3 635 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 146 1.3E-34 T 13-10-2018 IPR002178 PTS EIIA type-2 domain VEA_001305 a702a2c8dd2afd4db4e58a274624e9d3 635 Gene3D G3DSA:3.40.930.10 1 147 2.9E-40 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VEA_001305 a702a2c8dd2afd4db4e58a274624e9d3 635 SUPERFAMILY SSF52794 164 260 2.88E-35 T 13-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VEA_001305 a702a2c8dd2afd4db4e58a274624e9d3 635 Pfam PF02378 Phosphotransferase system, EIIC 292 567 2.1E-16 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VEA_001305 a702a2c8dd2afd4db4e58a274624e9d3 635 Gene3D G3DSA:3.40.50.2300 155 263 2.2E-40 T 13-10-2018 VEA_001340 e7715ca76f0e1a1bd8aa949ee0f155bb 605 Gene3D G3DSA:3.10.20.30 509 605 8.7E-21 T 13-10-2018 IPR012675 Beta-grasp domain superfamily VEA_001340 e7715ca76f0e1a1bd8aa949ee0f155bb 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 478 486 2.5E-5 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEA_001340 e7715ca76f0e1a1bd8aa949ee0f155bb 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 388 407 2.5E-5 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEA_001340 e7715ca76f0e1a1bd8aa949ee0f155bb 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 309 319 2.5E-5 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEA_001340 e7715ca76f0e1a1bd8aa949ee0f155bb 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 328 335 2.5E-5 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEA_001340 e7715ca76f0e1a1bd8aa949ee0f155bb 605 Gene3D G3DSA:3.40.50.80 381 508 2.1E-32 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VEA_001340 e7715ca76f0e1a1bd8aa949ee0f155bb 605 Pfam PF03473 MOSC domain 138 262 6.5E-31 T 13-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 VEA_001340 e7715ca76f0e1a1bd8aa949ee0f155bb 605 SUPERFAMILY SSF52343 368 508 3.27E-36 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VEA_001340 e7715ca76f0e1a1bd8aa949ee0f155bb 605 SUPERFAMILY SSF141673 6 133 1.31E-29 T 13-10-2018 VEA_001340 e7715ca76f0e1a1bd8aa949ee0f155bb 605 SUPERFAMILY SSF50800 7 264 1.31E-14 T 13-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily VEA_001340 e7715ca76f0e1a1bd8aa949ee0f155bb 605 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 531 597 1.3E-11 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VEA_001340 e7715ca76f0e1a1bd8aa949ee0f155bb 605 Pfam PF00970 Oxidoreductase FAD-binding domain 284 378 1.8E-14 T 13-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VEA_001340 e7715ca76f0e1a1bd8aa949ee0f155bb 605 SUPERFAMILY SSF63380 275 380 8.6E-26 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VEA_001340 e7715ca76f0e1a1bd8aa949ee0f155bb 605 Pfam PF03476 MOSC N-terminal beta barrel domain 6 118 2.5E-29 T 13-10-2018 IPR005303 MOSC, N-terminal beta barrel KEGG: 00790+2.8.1.9|MetaCyc: PWY-5963 VEA_001340 e7715ca76f0e1a1bd8aa949ee0f155bb 605 Pfam PF00175 Oxidoreductase NAD-binding domain 389 492 2.0E-18 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VEA_001340 e7715ca76f0e1a1bd8aa949ee0f155bb 605 Gene3D G3DSA:2.40.30.10 279 378 5.3E-25 T 13-10-2018 VEA_001340 e7715ca76f0e1a1bd8aa949ee0f155bb 605 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 555 563 - T 13-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VEA_001340 e7715ca76f0e1a1bd8aa949ee0f155bb 605 SUPERFAMILY SSF54292 501 604 1.44E-25 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VEA_001340 e7715ca76f0e1a1bd8aa949ee0f155bb 605 PRINTS PR00406 Cytochrome B5 reductase signature 478 486 6.4E-8 T 13-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 VEA_001340 e7715ca76f0e1a1bd8aa949ee0f155bb 605 PRINTS PR00406 Cytochrome B5 reductase signature 328 335 6.4E-8 T 13-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 VEA_001340 e7715ca76f0e1a1bd8aa949ee0f155bb 605 PRINTS PR00406 Cytochrome B5 reductase signature 388 407 6.4E-8 T 13-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 VEA_001340 e7715ca76f0e1a1bd8aa949ee0f155bb 605 PRINTS PR00406 Cytochrome B5 reductase signature 425 436 6.4E-8 T 13-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 VEA_001340 e7715ca76f0e1a1bd8aa949ee0f155bb 605 PRINTS PR00406 Cytochrome B5 reductase signature 365 379 6.4E-8 T 13-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 VEA_003980 289ecd6140f56523d9b8b55cca846bd4 166 Pfam PF03887 YfbU domain 1 166 1.7E-70 T 13-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU VEA_003980 289ecd6140f56523d9b8b55cca846bd4 166 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 166 38.345 T 13-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU VEA_003980 289ecd6140f56523d9b8b55cca846bd4 166 Gene3D G3DSA:1.10.3190.10 54 166 3.4E-37 T 13-10-2018 IPR023146 YfbU, alpha-helical bundle domain superfamily VEA_003980 289ecd6140f56523d9b8b55cca846bd4 166 Gene3D G3DSA:1.10.287.680 1 53 1.9E-32 T 13-10-2018 IPR023145 YfbU, helix-hairpin domain superfamily VEA_003980 289ecd6140f56523d9b8b55cca846bd4 166 PIRSF PIRSF006272 1 166 3.9E-79 T 13-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU VEA_003980 289ecd6140f56523d9b8b55cca846bd4 166 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 166 4.0E-92 T 13-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU VEA_003980 289ecd6140f56523d9b8b55cca846bd4 166 SUPERFAMILY SSF116960 1 166 1.03E-66 T 13-10-2018 VEA_000532 9dfc5bd03b32ff5fc46656ac545713b6 180 Pfam PF12945 Flagellar protein YcgR 2 65 2.9E-7 T 13-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal VEA_000532 9dfc5bd03b32ff5fc46656ac545713b6 180 SUPERFAMILY SSF141371 2 75 1.53E-19 T 13-10-2018 VEA_000532 9dfc5bd03b32ff5fc46656ac545713b6 180 SUPERFAMILY SSF141371 76 177 8.63E-17 T 13-10-2018 VEA_000532 9dfc5bd03b32ff5fc46656ac545713b6 180 Gene3D G3DSA:2.30.110.10 1 72 6.2E-6 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VEA_000532 9dfc5bd03b32ff5fc46656ac545713b6 180 Pfam PF07238 PilZ domain 73 162 5.8E-10 T 13-10-2018 IPR009875 PilZ domain GO:0035438 VEA_000532 9dfc5bd03b32ff5fc46656ac545713b6 180 Gene3D G3DSA:2.40.10.220 73 174 5.9E-6 T 13-10-2018 VEA_000502 07c02271ecf3a0833c74024adc9eb0ab 589 SUPERFAMILY SSF58104 278 586 2.27E-69 T 13-10-2018 VEA_000502 07c02271ecf3a0833c74024adc9eb0ab 589 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 372 552 6.3E-40 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_000502 07c02271ecf3a0833c74024adc9eb0ab 589 SMART SM00283 324 585 2.6E-61 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_000502 07c02271ecf3a0833c74024adc9eb0ab 589 Gene3D G3DSA:1.10.287.950 255 587 8.3E-65 T 13-10-2018 VEA_001790 23eec55d60e2c50ff03b6e8671216026 251 Pfam PF06251 Capsule biosynthesis GfcC 28 245 3.2E-18 T 13-10-2018 IPR010425 Domain of unknown function DUF1017 VEA_001226 786223031c8c9623f62e9c6794fb007f 677 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 504 534 - T 13-10-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 VEA_001226 786223031c8c9623f62e9c6794fb007f 677 Pfam PF00326 Prolyl oligopeptidase family 459 673 4.9E-70 T 13-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 VEA_001226 786223031c8c9623f62e9c6794fb007f 677 SUPERFAMILY SSF50993 1 407 1.2E-94 T 13-10-2018 VEA_001226 786223031c8c9623f62e9c6794fb007f 677 SUPERFAMILY SSF53474 411 651 5.64E-50 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_001226 786223031c8c9623f62e9c6794fb007f 677 Gene3D G3DSA:2.130.10.120 70 403 4.3E-246 T 13-10-2018 VEA_001226 786223031c8c9623f62e9c6794fb007f 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 583 598 2.2E-60 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VEA_001226 786223031c8c9623f62e9c6794fb007f 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 443 461 2.2E-60 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VEA_001226 786223031c8c9623f62e9c6794fb007f 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 469 493 2.2E-60 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VEA_001226 786223031c8c9623f62e9c6794fb007f 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 497 516 2.2E-60 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VEA_001226 786223031c8c9623f62e9c6794fb007f 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 527 547 2.2E-60 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VEA_001226 786223031c8c9623f62e9c6794fb007f 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 602 624 2.2E-60 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VEA_001226 786223031c8c9623f62e9c6794fb007f 677 Gene3D G3DSA:3.40.50.1820 12 642 4.3E-246 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_001226 786223031c8c9623f62e9c6794fb007f 677 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 5 401 7.3E-120 T 13-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 VEA_000520 935bde06bbad4264f4c43d592e42971f 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 243 5.5E-58 T 13-10-2018 VEA_000520 935bde06bbad4264f4c43d592e42971f 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 184 5.1E-4 T 13-10-2018 VEA_000520 935bde06bbad4264f4c43d592e42971f 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 3.1E-45 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000520 935bde06bbad4264f4c43d592e42971f 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 3.1E-45 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000520 935bde06bbad4264f4c43d592e42971f 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 3.1E-45 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000520 935bde06bbad4264f4c43d592e42971f 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.1E-45 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000520 935bde06bbad4264f4c43d592e42971f 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 3.1E-45 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000520 935bde06bbad4264f4c43d592e42971f 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 3.1E-45 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000520 935bde06bbad4264f4c43d592e42971f 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VEA_000520 935bde06bbad4264f4c43d592e42971f 246 Gene3D G3DSA:3.40.50.720 1 245 1.1E-75 T 13-10-2018 VEA_000520 935bde06bbad4264f4c43d592e42971f 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 4.7E-15 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000520 935bde06bbad4264f4c43d592e42971f 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 4.7E-15 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000520 935bde06bbad4264f4c43d592e42971f 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 4.7E-15 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000520 935bde06bbad4264f4c43d592e42971f 246 SUPERFAMILY SSF51735 2 245 1.18E-77 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_000520 935bde06bbad4264f4c43d592e42971f 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 3 245 9.2E-116 T 13-10-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|MetaCyc: PWY-7948 VEA_002959 0763f5e339484cb1ef01325305e3247d 558 Gene3D G3DSA:3.40.190.10 58 540 2.7E-194 T 13-10-2018 VEA_002959 0763f5e339484cb1ef01325305e3247d 558 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 104 125 - T 13-10-2018 IPR023765 Solute-binding protein family 5, conserved site VEA_002959 0763f5e339484cb1ef01325305e3247d 558 Gene3D G3DSA:3.90.76.10 88 211 2.7E-194 T 13-10-2018 VEA_002959 0763f5e339484cb1ef01325305e3247d 558 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 100 478 3.8E-95 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain VEA_002959 0763f5e339484cb1ef01325305e3247d 558 SUPERFAMILY SSF53850 56 546 3.44E-149 T 13-10-2018 VEA_002959 0763f5e339484cb1ef01325305e3247d 558 Gene3D G3DSA:3.10.105.10 313 528 2.7E-194 T 13-10-2018 VEA_002959 0763f5e339484cb1ef01325305e3247d 558 PIRSF PIRSF002741 3 558 2.9E-117 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VEA_002201 c5574f074a5f7421f8fb7338f562a570 561 Pfam PF03445 Putative nucleotidyltransferase DUF294 255 386 1.8E-42 T 13-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 VEA_002201 c5574f074a5f7421f8fb7338f562a570 561 SUPERFAMILY SSF54631 97 229 6.03E-17 T 13-10-2018 VEA_002201 c5574f074a5f7421f8fb7338f562a570 561 Gene3D G3DSA:2.60.120.10 1 89 1.7E-5 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VEA_002201 c5574f074a5f7421f8fb7338f562a570 561 SUPERFAMILY SSF51206 2 81 7.99E-8 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like VEA_002201 c5574f074a5f7421f8fb7338f562a570 561 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 425 557 2.7E-39 T 13-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding VEA_002201 c5574f074a5f7421f8fb7338f562a570 561 Gene3D G3DSA:3.10.580.10 92 241 1.1E-17 T 13-10-2018 VEA_002838 43c53146d3f29849f23620d3e256fc25 359 PIRSF PIRSF020479 5 359 2.4E-134 T 13-10-2018 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like VEA_002838 43c53146d3f29849f23620d3e256fc25 359 SUPERFAMILY SSF50341 214 349 1.96E-14 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VEA_002838 43c53146d3f29849f23620d3e256fc25 359 SMART SM00260 212 346 2.3E-4 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VEA_002838 43c53146d3f29849f23620d3e256fc25 359 Pfam PF01584 CheW-like domain 216 348 1.2E-15 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VEA_003508 b68037dbdaa4af9e471ae2ee7abc5d16 592 Gene3D G3DSA:2.40.340.10 513 583 2.2E-135 T 13-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VEA_003508 b68037dbdaa4af9e471ae2ee7abc5d16 592 Pfam PF03453 MoeA N-terminal region (domain I and II) 195 353 4.9E-38 T 13-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VEA_003508 b68037dbdaa4af9e471ae2ee7abc5d16 592 PIRSF PIRSF036618 1 592 0.0 T 13-10-2018 IPR012182 Bifunctional molybdenum cofactor biosynthesis MobB/MoeA VEA_003508 b68037dbdaa4af9e471ae2ee7abc5d16 592 Gene3D G3DSA:3.40.980.10 361 512 2.2E-135 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily VEA_003508 b68037dbdaa4af9e471ae2ee7abc5d16 592 SUPERFAMILY SSF53218 363 508 1.44E-43 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily VEA_003508 b68037dbdaa4af9e471ae2ee7abc5d16 592 Pfam PF03454 MoeA C-terminal region (domain IV) 517 588 9.0E-21 T 13-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VEA_003508 b68037dbdaa4af9e471ae2ee7abc5d16 592 Gene3D G3DSA:3.40.50.300 10 165 8.1E-57 T 13-10-2018 VEA_003508 b68037dbdaa4af9e471ae2ee7abc5d16 592 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 439 472 - T 13-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 VEA_003508 b68037dbdaa4af9e471ae2ee7abc5d16 592 Gene3D G3DSA:3.90.105.10 213 360 2.2E-135 T 13-10-2018 VEA_003508 b68037dbdaa4af9e471ae2ee7abc5d16 592 Gene3D G3DSA:2.20.25.120 53 85 8.1E-57 T 13-10-2018 VEA_003508 b68037dbdaa4af9e471ae2ee7abc5d16 592 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 9 142 8.9E-49 T 13-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 VEA_003508 b68037dbdaa4af9e471ae2ee7abc5d16 592 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 362 499 1.5E-31 T 13-10-2018 IPR001453 MoaB/Mog domain VEA_003508 b68037dbdaa4af9e471ae2ee7abc5d16 592 SUPERFAMILY SSF63867 512 590 4.19E-23 T 13-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VEA_003508 b68037dbdaa4af9e471ae2ee7abc5d16 592 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 9 167 9.6E-44 T 13-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 VEA_003508 b68037dbdaa4af9e471ae2ee7abc5d16 592 Gene3D G3DSA:2.170.190.11 236 327 2.2E-135 T 13-10-2018 VEA_003508 b68037dbdaa4af9e471ae2ee7abc5d16 592 SUPERFAMILY SSF52540 7 169 1.7E-25 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003508 b68037dbdaa4af9e471ae2ee7abc5d16 592 Pfam PF00994 Probable molybdopterin binding domain 366 503 1.4E-25 T 13-10-2018 IPR001453 MoaB/Mog domain VEA_003508 b68037dbdaa4af9e471ae2ee7abc5d16 592 SMART SM00852 366 503 5.9E-40 T 13-10-2018 IPR001453 MoaB/Mog domain VEA_003508 b68037dbdaa4af9e471ae2ee7abc5d16 592 SUPERFAMILY SSF63882 192 362 5.36E-47 T 13-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VEA_000202 7ac1fc781978a7c428721872c2df109e 476 SUPERFAMILY SSF58104 165 474 7.72E-67 T 13-10-2018 VEA_000202 7ac1fc781978a7c428721872c2df109e 476 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 287 440 1.6E-39 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_000202 7ac1fc781978a7c428721872c2df109e 476 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 311 338 1.2E-24 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEA_000202 7ac1fc781978a7c428721872c2df109e 476 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 234 263 1.2E-24 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEA_000202 7ac1fc781978a7c428721872c2df109e 476 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 340 369 1.2E-24 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEA_000202 7ac1fc781978a7c428721872c2df109e 476 Gene3D G3DSA:1.10.287.950 149 476 1.3E-66 T 13-10-2018 VEA_000202 7ac1fc781978a7c428721872c2df109e 476 SMART SM00283 213 474 8.8E-50 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_000995 836ab85ad1c9455e9eca0cba7b7e310c 675 Gene3D G3DSA:3.40.50.11040 3 167 3.4E-20 T 13-10-2018 VEA_000995 836ab85ad1c9455e9eca0cba7b7e310c 675 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 19 671 42.223 T 13-10-2018 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 VEA_000995 836ab85ad1c9455e9eca0cba7b7e310c 675 SUPERFAMILY SSF55729 356 539 6.69E-15 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_000995 836ab85ad1c9455e9eca0cba7b7e310c 675 Pfam PF05127 Helicase 176 343 7.5E-58 T 13-10-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 VEA_000995 836ab85ad1c9455e9eca0cba7b7e310c 675 Pfam PF08351 Domain of unknown function (DUF1726) 68 118 4.7E-5 T 13-10-2018 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal Reactome: R-HSA-6790901 VEA_000995 836ab85ad1c9455e9eca0cba7b7e310c 675 SUPERFAMILY SSF52540 147 286 3.88E-15 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000995 836ab85ad1c9455e9eca0cba7b7e310c 675 Pfam PF13718 GNAT acetyltransferase 2 378 491 1.8E-19 T 13-10-2018 IPR000182 GNAT domain VEA_000995 836ab85ad1c9455e9eca0cba7b7e310c 675 Gene3D G3DSA:3.40.50.12320 174 333 6.2E-46 T 13-10-2018 VEA_000995 836ab85ad1c9455e9eca0cba7b7e310c 675 Gene3D G3DSA:3.40.630.30 336 540 1.7E-69 T 13-10-2018 VEA_000918 444e9b39d1d339fed5e672fe51365bd3 309 Pfam PF00294 pfkB family carbohydrate kinase 7 304 1.2E-60 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB VEA_000918 444e9b39d1d339fed5e672fe51365bd3 309 SUPERFAMILY SSF53613 6 301 8.11E-73 T 13-10-2018 IPR029056 Ribokinase-like VEA_000918 444e9b39d1d339fed5e672fe51365bd3 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 257 270 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VEA_000918 444e9b39d1d339fed5e672fe51365bd3 309 Gene3D G3DSA:3.40.1190.20 4 308 3.9E-79 T 13-10-2018 IPR029056 Ribokinase-like VEA_002038 863b69362da839ae6d3ec8e2a2357f27 613 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 13-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VEA_002038 863b69362da839ae6d3ec8e2a2357f27 613 SUPERFAMILY SSF143975 3 420 1.11E-137 T 13-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VEA_002038 863b69362da839ae6d3ec8e2a2357f27 613 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 607 2.0E-268 T 13-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VEA_002038 863b69362da839ae6d3ec8e2a2357f27 613 SUPERFAMILY SSF52016 421 608 1.57E-61 T 13-10-2018 VEA_002038 863b69362da839ae6d3ec8e2a2357f27 613 Pfam PF00920 Dehydratase family 34 604 4.5E-222 T 13-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VEA_002038 863b69362da839ae6d3ec8e2a2357f27 613 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 13-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VEA_002038 863b69362da839ae6d3ec8e2a2357f27 613 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 607 45.427 T 13-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VEA_002038 863b69362da839ae6d3ec8e2a2357f27 613 Gene3D G3DSA:3.50.30.80 421 573 1.5E-55 T 13-10-2018 VEA_002203 3771d4bb56659d0ce5d4b675f4f18a92 1055 SMART SM00448 938 1051 1.9E-15 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_002203 3771d4bb56659d0ce5d4b675f4f18a92 1055 SMART SM00387 809 918 1.9E-28 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_002203 3771d4bb56659d0ce5d4b675f4f18a92 1055 SUPERFAMILY SSF55785 538 653 1.87E-9 T 13-10-2018 IPR035965 PAS domain superfamily VEA_002203 3771d4bb56659d0ce5d4b675f4f18a92 1055 Pfam PF00072 Response regulator receiver domain 940 1051 4.5E-11 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_002203 3771d4bb56659d0ce5d4b675f4f18a92 1055 Gene3D G3DSA:1.10.287.130 663 763 5.1E-14 T 13-10-2018 VEA_002203 3771d4bb56659d0ce5d4b675f4f18a92 1055 PRINTS PR00344 Bacterial sensor protein C-terminal signature 863 873 2.6E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_002203 3771d4bb56659d0ce5d4b675f4f18a92 1055 PRINTS PR00344 Bacterial sensor protein C-terminal signature 845 859 2.6E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_002203 3771d4bb56659d0ce5d4b675f4f18a92 1055 PRINTS PR00344 Bacterial sensor protein C-terminal signature 878 896 2.6E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_002203 3771d4bb56659d0ce5d4b675f4f18a92 1055 PRINTS PR00344 Bacterial sensor protein C-terminal signature 902 915 2.6E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_002203 3771d4bb56659d0ce5d4b675f4f18a92 1055 SUPERFAMILY SSF52172 937 1054 1.1E-19 T 13-10-2018 IPR011006 CheY-like superfamily VEA_002203 3771d4bb56659d0ce5d4b675f4f18a92 1055 Gene3D G3DSA:3.30.450.20 528 660 6.3E-12 T 13-10-2018 VEA_002203 3771d4bb56659d0ce5d4b675f4f18a92 1055 Pfam PF12860 PAS fold 546 660 3.5E-44 T 13-10-2018 VEA_002203 3771d4bb56659d0ce5d4b675f4f18a92 1055 SMART SM00388 700 765 5.2E-13 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_002203 3771d4bb56659d0ce5d4b675f4f18a92 1055 Pfam PF00512 His Kinase A (phospho-acceptor) domain 700 765 5.4E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_002203 3771d4bb56659d0ce5d4b675f4f18a92 1055 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 810 916 9.2E-20 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_002203 3771d4bb56659d0ce5d4b675f4f18a92 1055 Gene3D G3DSA:3.30.565.10 764 919 3.0E-35 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_002203 3771d4bb56659d0ce5d4b675f4f18a92 1055 SUPERFAMILY SSF55874 755 914 8.12E-38 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_002203 3771d4bb56659d0ce5d4b675f4f18a92 1055 Gene3D G3DSA:3.40.50.2300 935 1055 2.9E-17 T 13-10-2018 VEA_002203 3771d4bb56659d0ce5d4b675f4f18a92 1055 SUPERFAMILY SSF47384 686 766 1.61E-13 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEA_003185 9048d65f5c8eb7ba0b43f20b03e73148 95 Gene3D G3DSA:3.10.180.10 1 95 8.0E-16 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEA_003185 9048d65f5c8eb7ba0b43f20b03e73148 95 SUPERFAMILY SSF54593 6 91 1.39E-7 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEA_003189 9048d65f5c8eb7ba0b43f20b03e73148 95 Gene3D G3DSA:3.10.180.10 1 95 8.0E-16 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEA_003189 9048d65f5c8eb7ba0b43f20b03e73148 95 SUPERFAMILY SSF54593 6 91 1.39E-7 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEA_001943 75b199d8be09886822d23f29b9e9b7a5 397 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 395 4.1E-130 T 13-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like VEA_001943 75b199d8be09886822d23f29b9e9b7a5 397 Gene3D G3DSA:2.40.30.10 191 342 5.1E-132 T 13-10-2018 VEA_001943 75b199d8be09886822d23f29b9e9b7a5 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 365 372 7.4E-9 T 13-10-2018 VEA_001943 75b199d8be09886822d23f29b9e9b7a5 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 158 167 7.4E-9 T 13-10-2018 VEA_001943 75b199d8be09886822d23f29b9e9b7a5 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 7.4E-9 T 13-10-2018 VEA_001943 75b199d8be09886822d23f29b9e9b7a5 397 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 350 372 5.0E-5 T 13-10-2018 VEA_001943 75b199d8be09886822d23f29b9e9b7a5 397 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 5.0E-5 T 13-10-2018 VEA_001943 75b199d8be09886822d23f29b9e9b7a5 397 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 5.0E-5 T 13-10-2018 VEA_001943 75b199d8be09886822d23f29b9e9b7a5 397 Pfam PF03486 HI0933-like protein 5 395 3.0E-158 T 13-10-2018 VEA_001943 75b199d8be09886822d23f29b9e9b7a5 397 Gene3D G3DSA:1.10.8.260 265 325 5.1E-132 T 13-10-2018 IPR023166 HI0933-like insert domain superfamily VEA_001943 75b199d8be09886822d23f29b9e9b7a5 397 SUPERFAMILY SSF160996 193 341 1.96E-42 T 13-10-2018 VEA_001943 75b199d8be09886822d23f29b9e9b7a5 397 Gene3D G3DSA:3.50.50.60 8 391 5.1E-132 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_001943 75b199d8be09886822d23f29b9e9b7a5 397 SUPERFAMILY SSF51905 1 397 4.02E-59 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_000317 8853a5859e57d8a3eebd796188fd3d2b 987 SUPERFAMILY SSF47384 457 535 6.28E-20 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEA_000317 8853a5859e57d8a3eebd796188fd3d2b 987 TIGRFAM TIGR02956 TMAO_torS: TMAO reductase sytem sensor TorS 7 983 0.0 T 13-10-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 VEA_000317 8853a5859e57d8a3eebd796188fd3d2b 987 SUPERFAMILY SSF55874 523 696 3.8E-45 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_000317 8853a5859e57d8a3eebd796188fd3d2b 987 Gene3D G3DSA:1.10.287.130 402 532 7.9E-26 T 13-10-2018 VEA_000317 8853a5859e57d8a3eebd796188fd3d2b 987 Pfam PF00512 His Kinase A (phospho-acceptor) domain 469 534 1.4E-18 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_000317 8853a5859e57d8a3eebd796188fd3d2b 987 SUPERFAMILY SSF47226 876 985 9.94E-21 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 VEA_000317 8853a5859e57d8a3eebd796188fd3d2b 987 PIRSF PIRSF036437 1 987 0.0 T 13-10-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 VEA_000317 8853a5859e57d8a3eebd796188fd3d2b 987 SMART SM00387 581 694 6.7E-39 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_000317 8853a5859e57d8a3eebd796188fd3d2b 987 SUPERFAMILY SSF52172 712 844 4.84E-33 T 13-10-2018 IPR011006 CheY-like superfamily VEA_000317 8853a5859e57d8a3eebd796188fd3d2b 987 SMART SM00448 712 832 6.1E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_000317 8853a5859e57d8a3eebd796188fd3d2b 987 Gene3D G3DSA:3.40.50.2300 707 842 2.1E-33 T 13-10-2018 VEA_000317 8853a5859e57d8a3eebd796188fd3d2b 987 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 672 3.0E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_000317 8853a5859e57d8a3eebd796188fd3d2b 987 PRINTS PR00344 Bacterial sensor protein C-terminal signature 620 634 3.0E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_000317 8853a5859e57d8a3eebd796188fd3d2b 987 PRINTS PR00344 Bacterial sensor protein C-terminal signature 638 648 3.0E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_000317 8853a5859e57d8a3eebd796188fd3d2b 987 PRINTS PR00344 Bacterial sensor protein C-terminal signature 678 691 3.0E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_000317 8853a5859e57d8a3eebd796188fd3d2b 987 Gene3D G3DSA:1.20.58.920 47 181 7.1E-48 T 13-10-2018 IPR038188 TorS, sensor domain superfamily VEA_000317 8853a5859e57d8a3eebd796188fd3d2b 987 Gene3D G3DSA:1.20.58.920 182 322 4.9E-53 T 13-10-2018 IPR038188 TorS, sensor domain superfamily VEA_000317 8853a5859e57d8a3eebd796188fd3d2b 987 Pfam PF01627 Hpt domain 900 981 1.4E-12 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VEA_000317 8853a5859e57d8a3eebd796188fd3d2b 987 Gene3D G3DSA:1.20.120.160 871 987 4.3E-21 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 VEA_000317 8853a5859e57d8a3eebd796188fd3d2b 987 Pfam PF00072 Response regulator receiver domain 714 832 5.9E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_000317 8853a5859e57d8a3eebd796188fd3d2b 987 SMART SM00388 469 534 1.2E-22 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_000317 8853a5859e57d8a3eebd796188fd3d2b 987 Gene3D G3DSA:3.30.565.10 533 697 1.1E-50 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_000317 8853a5859e57d8a3eebd796188fd3d2b 987 SMART SM00073 888 985 1.2E-5 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VEA_000317 8853a5859e57d8a3eebd796188fd3d2b 987 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 581 693 1.7E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_002675 a70733cd833ddf6bca1ebd4674ed053f 505 SUPERFAMILY SSF53067 255 497 5.18E-85 T 13-10-2018 VEA_002675 a70733cd833ddf6bca1ebd4674ed053f 505 PIRSF PIRSF000538 4 503 2.0E-176 T 13-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VEA_002675 a70733cd833ddf6bca1ebd4674ed053f 505 Gene3D G3DSA:3.30.420.40 255 500 3.1E-93 T 13-10-2018 VEA_002675 a70733cd833ddf6bca1ebd4674ed053f 505 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 451 5.4E-61 T 13-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 VEA_002675 a70733cd833ddf6bca1ebd4674ed053f 505 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 136 148 - T 13-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VEA_002675 a70733cd833ddf6bca1ebd4674ed053f 505 SUPERFAMILY SSF53067 5 256 8.98E-94 T 13-10-2018 VEA_002675 a70733cd833ddf6bca1ebd4674ed053f 505 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 363 383 - T 13-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VEA_002675 a70733cd833ddf6bca1ebd4674ed053f 505 Hamap MF_00186 Glycerol kinase [glpK]. 4 498 58.191 T 13-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 VEA_002675 a70733cd833ddf6bca1ebd4674ed053f 505 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 5 497 1.4E-226 T 13-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 VEA_002675 a70733cd833ddf6bca1ebd4674ed053f 505 Gene3D G3DSA:3.30.420.40 2 254 8.4E-113 T 13-10-2018 VEA_002675 a70733cd833ddf6bca1ebd4674ed053f 505 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 253 2.6E-86 T 13-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 VEA_001589 529a4374fd6bd9f6ef908ef61f73b589 157 Gene3D G3DSA:2.60.40.1890 37 151 9.4E-38 T 13-10-2018 IPR036182 Copper chaperone PCuAC superfamily VEA_001589 529a4374fd6bd9f6ef908ef61f73b589 157 Pfam PF04314 Copper chaperone PCu(A)C 33 141 9.5E-39 T 13-10-2018 IPR007410 Copper chaperone PCuAC VEA_001589 529a4374fd6bd9f6ef908ef61f73b589 157 SUPERFAMILY SSF110087 8 149 4.84E-50 T 13-10-2018 IPR036182 Copper chaperone PCuAC superfamily VEA_001043 a99c1ef66b31159dad4282105915baf1 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 317 325 6.1E-60 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEA_001043 a99c1ef66b31159dad4282105915baf1 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 354 378 6.1E-60 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEA_001043 a99c1ef66b31159dad4282105915baf1 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 214 236 6.1E-60 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEA_001043 a99c1ef66b31159dad4282105915baf1 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 480 498 6.1E-60 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEA_001043 a99c1ef66b31159dad4282105915baf1 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 339 351 6.1E-60 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEA_001043 a99c1ef66b31159dad4282105915baf1 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 445 466 6.1E-60 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEA_001043 a99c1ef66b31159dad4282105915baf1 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 246 261 6.1E-60 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEA_001043 a99c1ef66b31159dad4282105915baf1 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 276 6.1E-60 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEA_001043 a99c1ef66b31159dad4282105915baf1 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 406 422 6.1E-60 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEA_001043 a99c1ef66b31159dad4282105915baf1 522 PIRSF PIRSF000238 1 522 2.3E-254 T 13-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 VEA_001043 a99c1ef66b31159dad4282105915baf1 522 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 346 366 - T 13-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 VEA_001043 a99c1ef66b31159dad4282105915baf1 522 SUPERFAMILY SSF51905 203 516 1.05E-49 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_001043 a99c1ef66b31159dad4282105915baf1 522 SUPERFAMILY SSF52833 104 197 1.79E-23 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VEA_001043 a99c1ef66b31159dad4282105915baf1 522 Pfam PF13192 Thioredoxin domain 120 194 3.3E-12 T 13-10-2018 IPR012336 Thioredoxin-like fold VEA_001043 a99c1ef66b31159dad4282105915baf1 522 Gene3D G3DSA:3.50.50.60 213 510 3.7E-105 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_001043 a99c1ef66b31159dad4282105915baf1 522 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 213 506 1.2E-41 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VEA_001043 a99c1ef66b31159dad4282105915baf1 522 Gene3D G3DSA:3.50.50.60 328 451 3.7E-105 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_001043 a99c1ef66b31159dad4282105915baf1 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 215 234 2.3E-35 T 13-10-2018 VEA_001043 a99c1ef66b31159dad4282105915baf1 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 316 334 2.3E-35 T 13-10-2018 VEA_001043 a99c1ef66b31159dad4282105915baf1 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 443 459 2.3E-35 T 13-10-2018 VEA_001043 a99c1ef66b31159dad4282105915baf1 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 358 376 2.3E-35 T 13-10-2018 VEA_001043 a99c1ef66b31159dad4282105915baf1 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 470 492 2.3E-35 T 13-10-2018 VEA_001043 a99c1ef66b31159dad4282105915baf1 522 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 520 1.1E-247 T 13-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 VEA_001043 a99c1ef66b31159dad4282105915baf1 522 Gene3D G3DSA:3.40.30.80 1 200 7.1E-65 T 13-10-2018 VEA_001043 a99c1ef66b31159dad4282105915baf1 522 SUPERFAMILY SSF52833 1 101 2.91E-26 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VEA_003134 1aef20c81e5212aee933555c94dd998b 428 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 423 3.6E-100 T 13-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VEA_003134 1aef20c81e5212aee933555c94dd998b 428 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 422 1.3E-105 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VEA_003134 1aef20c81e5212aee933555c94dd998b 428 PIRSF PIRSF006066 1 427 5.1E-74 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VEA_003150 a0599d208b70b65668a7b4258da157ed 472 PRINTS PR01042 Aspartyl-tRNA synthetase signature 214 226 1.6E-14 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEA_003150 a0599d208b70b65668a7b4258da157ed 472 PRINTS PR01042 Aspartyl-tRNA synthetase signature 387 403 1.6E-14 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEA_003150 a0599d208b70b65668a7b4258da157ed 472 PRINTS PR01042 Aspartyl-tRNA synthetase signature 427 441 1.6E-14 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEA_003150 a0599d208b70b65668a7b4258da157ed 472 PRINTS PR01042 Aspartyl-tRNA synthetase signature 230 243 1.6E-14 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEA_003150 a0599d208b70b65668a7b4258da157ed 472 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 12 472 45.88 T 13-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 VEA_003150 a0599d208b70b65668a7b4258da157ed 472 Gene3D G3DSA:2.40.50.140 3 112 1.1E-19 T 13-10-2018 VEA_003150 a0599d208b70b65668a7b4258da157ed 472 Pfam PF00152 tRNA synthetases class II (D, K and N) 125 466 4.8E-81 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEA_003150 a0599d208b70b65668a7b4258da157ed 472 Gene3D G3DSA:3.30.930.10 115 471 4.7E-109 T 13-10-2018 VEA_003150 a0599d208b70b65668a7b4258da157ed 472 SUPERFAMILY SSF50249 21 107 4.93E-17 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_003150 a0599d208b70b65668a7b4258da157ed 472 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 11 472 1.2E-206 T 13-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 VEA_003150 a0599d208b70b65668a7b4258da157ed 472 SUPERFAMILY SSF55681 110 470 8.36E-95 T 13-10-2018 VEA_003150 a0599d208b70b65668a7b4258da157ed 472 Pfam PF01336 OB-fold nucleic acid binding domain 26 105 3.5E-11 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VEA_002957 63414e7334ac8ef8a3cd5d21f148eebd 85 Gene3D G3DSA:3.10.20.30 1 85 3.9E-23 T 13-10-2018 IPR012675 Beta-grasp domain superfamily VEA_002957 63414e7334ac8ef8a3cd5d21f148eebd 85 SUPERFAMILY SSF54285 1 85 5.05E-19 T 13-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VEA_002957 63414e7334ac8ef8a3cd5d21f148eebd 85 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 85 1.8E-21 T 13-10-2018 VEA_002957 63414e7334ac8ef8a3cd5d21f148eebd 85 Pfam PF02597 ThiS family 4 85 1.3E-21 T 13-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 VEA_004036 4650d2d75b8c6aee7622ffcf5979029d 440 Pfam PF01966 HD domain 62 146 8.5E-7 T 13-10-2018 IPR006674 HD domain VEA_004036 4650d2d75b8c6aee7622ffcf5979029d 440 SUPERFAMILY SSF109604 19 437 1.38E-77 T 13-10-2018 VEA_004036 4650d2d75b8c6aee7622ffcf5979029d 440 SMART SM00471 58 264 2.6E-7 T 13-10-2018 IPR003607 HD/PDEase domain VEA_004036 4650d2d75b8c6aee7622ffcf5979029d 440 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 24 436 1.5E-125 T 13-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 VEA_004036 4650d2d75b8c6aee7622ffcf5979029d 440 Pfam PF13286 Phosphohydrolase-associated domain 343 433 2.3E-24 T 13-10-2018 IPR026875 Phosphohydrolase-associated domain VEA_004036 4650d2d75b8c6aee7622ffcf5979029d 440 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 5 435 34.19 T 13-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 VEA_000902 1a01b516e39af5477797d4918ad09bc6 311 Gene3D G3DSA:1.10.287.470 85 145 1.9E-6 T 13-10-2018 VEA_000902 1a01b516e39af5477797d4918ad09bc6 311 SUPERFAMILY SSF111369 22 98 3.79E-9 T 13-10-2018 VEA_000902 1a01b516e39af5477797d4918ad09bc6 311 SUPERFAMILY SSF111369 156 236 2.35E-12 T 13-10-2018 VEA_000902 1a01b516e39af5477797d4918ad09bc6 311 Gene3D G3DSA:2.40.30.170 193 309 1.5E-34 T 13-10-2018 VEA_000902 1a01b516e39af5477797d4918ad09bc6 311 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 22 254 2.0E-14 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VEA_000902 1a01b516e39af5477797d4918ad09bc6 311 Gene3D G3DSA:2.40.50.100 24 56 4.1E-11 T 13-10-2018 VEA_000902 1a01b516e39af5477797d4918ad09bc6 311 Gene3D G3DSA:1.10.287.470 57 83 4.1E-11 T 13-10-2018 VEA_000902 1a01b516e39af5477797d4918ad09bc6 311 SUPERFAMILY SSF111369 89 143 3.92E-6 T 13-10-2018 VEA_002822 d145ca64885d215ec8ed0c98f1e2a219 348 PIRSF PIRSF002888 1 328 2.2E-92 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VEA_002822 d145ca64885d215ec8ed0c98f1e2a219 348 SUPERFAMILY SSF103039 4 230 5.75E-21 T 13-10-2018 IPR028976 CheC-like superfamily VEA_002822 d145ca64885d215ec8ed0c98f1e2a219 348 SUPERFAMILY SSF101801 247 322 3.79E-14 T 13-10-2018 IPR036429 SpoA-like superfamily VEA_002822 d145ca64885d215ec8ed0c98f1e2a219 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 9.9E-19 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VEA_002822 d145ca64885d215ec8ed0c98f1e2a219 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 88 104 9.9E-19 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VEA_002822 d145ca64885d215ec8ed0c98f1e2a219 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 113 132 9.9E-19 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VEA_002822 d145ca64885d215ec8ed0c98f1e2a219 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 9.9E-19 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VEA_002822 d145ca64885d215ec8ed0c98f1e2a219 348 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 250 319 1.2E-17 T 13-10-2018 IPR001543 Surface presentation of antigen (SpoA) VEA_002822 d145ca64885d215ec8ed0c98f1e2a219 348 Gene3D G3DSA:3.40.1550.10 43 230 1.3E-55 T 13-10-2018 IPR028976 CheC-like superfamily VEA_002822 d145ca64885d215ec8ed0c98f1e2a219 348 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 320 3.9E-124 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VEA_002822 d145ca64885d215ec8ed0c98f1e2a219 348 Pfam PF02154 Flagellar motor switch protein FliM 37 229 2.2E-83 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VEA_002028 30453164806cba871d524be44edbded2 513 Gene3D G3DSA:3.40.50.300 94 382 2.4E-130 T 13-10-2018 VEA_002028 30453164806cba871d524be44edbded2 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 8.0E-72 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEA_002028 30453164806cba871d524be44edbded2 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.655 T 13-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_002028 30453164806cba871d524be44edbded2 513 SUPERFAMILY SSF47917 383 511 1.36E-45 T 13-10-2018 VEA_002028 30453164806cba871d524be44edbded2 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 5.5E-14 T 13-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEA_002028 30453164806cba871d524be44edbded2 513 SUPERFAMILY SSF52540 96 381 1.26E-94 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002028 30453164806cba871d524be44edbded2 513 SUPERFAMILY SSF50615 10 94 5.1E-26 T 13-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEA_002028 30453164806cba871d524be44edbded2 513 Gene3D G3DSA:1.20.150.20 383 513 5.2E-48 T 13-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_002028 30453164806cba871d524be44edbded2 513 Gene3D G3DSA:2.40.30.20 1 93 5.3E-30 T 13-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEA_002028 30453164806cba871d524be44edbded2 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 2.5E-44 T 13-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_002028 30453164806cba871d524be44edbded2 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEA_002028 30453164806cba871d524be44edbded2 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 6.4E-251 T 13-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_000881 7f8dc36d12434af6c152dc40d9c12b8f 478 Gene3D G3DSA:3.40.640.10 145 361 8.7E-80 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_000881 7f8dc36d12434af6c152dc40d9c12b8f 478 Pfam PF00155 Aminotransferase class I and II 145 456 1.8E-22 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VEA_000881 7f8dc36d12434af6c152dc40d9c12b8f 478 Gene3D G3DSA:1.10.10.10 10 77 4.6E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000881 7f8dc36d12434af6c152dc40d9c12b8f 478 Gene3D G3DSA:3.90.1150.10 117 473 8.7E-80 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEA_000881 7f8dc36d12434af6c152dc40d9c12b8f 478 SMART SM00345 17 76 9.7E-19 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_000881 7f8dc36d12434af6c152dc40d9c12b8f 478 SUPERFAMILY SSF46785 11 77 9.33E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000881 7f8dc36d12434af6c152dc40d9c12b8f 478 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 6.2E-14 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_000881 7f8dc36d12434af6c152dc40d9c12b8f 478 SUPERFAMILY SSF53383 96 475 6.05E-76 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_000678 8881ee69922815600d43f485ebc8d025 334 SUPERFAMILY SSF52540 1 333 6.91E-103 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000678 8881ee69922815600d43f485ebc8d025 334 Gene3D G3DSA:3.40.50.300 128 333 9.2E-75 T 13-10-2018 VEA_000678 8881ee69922815600d43f485ebc8d025 334 Gene3D G3DSA:3.40.50.720 51 127 1.4E-17 T 13-10-2018 VEA_000678 8881ee69922815600d43f485ebc8d025 334 PIRSF PIRSF026760 3 334 5.1E-107 T 13-10-2018 IPR011669 Uncharacterised conserved protein UCP026760 VEA_000678 8881ee69922815600d43f485ebc8d025 334 Pfam PF07755 Domain of unknown function (DUF1611_C) P-loop domain 131 327 6.0E-74 T 13-10-2018 IPR035086 Domain of unknown function DUF1611, P-loop VEA_000678 8881ee69922815600d43f485ebc8d025 334 Pfam PF17396 Domain of unknown function (DUF1611_N) Rossmann-like domain 47 124 6.5E-21 T 13-10-2018 IPR035402 Domain of unknown function DUF1611-N, Rossmann-like domain VEA_002482 a16190c032a9f3368f4d38c64a3aaace 102 SUPERFAMILY SSF102829 6 95 5.23E-24 T 13-10-2018 IPR036192 Cell division protein ZapA-like superfamily VEA_002482 a16190c032a9f3368f4d38c64a3aaace 102 Pfam PF05164 Cell division protein ZapA 6 89 1.2E-19 T 13-10-2018 IPR007838 Cell division protein ZapA-like VEA_002482 a16190c032a9f3368f4d38c64a3aaace 102 Gene3D G3DSA:1.10.20.30 1 47 8.7E-19 T 13-10-2018 VEA_002523 84478de520e13c85d4054d4cf84fd9d1 65 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 58 4.4E-30 T 13-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 VEA_002523 84478de520e13c85d4054d4cf84fd9d1 65 Gene3D G3DSA:3.30.70.1680 1 59 8.5E-30 T 13-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 VEA_002523 84478de520e13c85d4054d4cf84fd9d1 65 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 4.0E-20 T 13-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 VEA_002523 84478de520e13c85d4054d4cf84fd9d1 65 SUPERFAMILY SSF117130 1 54 6.93E-21 T 13-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 VEA_002523 84478de520e13c85d4054d4cf84fd9d1 65 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 63 17.074 T 13-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 VEA_002523 84478de520e13c85d4054d4cf84fd9d1 65 Pfam PF02599 Global regulator protein family 1 52 2.0E-26 T 13-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 VEA_003951 3856cc325c0ffa6d3734bb8c02eeae91 426 PIRSF PIRSF000505 1 426 5.2E-156 T 13-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 VEA_003951 3856cc325c0ffa6d3734bb8c02eeae91 426 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 421 2.0E-156 T 13-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 VEA_003951 3856cc325c0ffa6d3734bb8c02eeae91 426 Gene3D G3DSA:3.65.10.10 242 419 9.9E-160 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 VEA_003951 3856cc325c0ffa6d3734bb8c02eeae91 426 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 424 4.9E-142 T 13-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 VEA_003951 3856cc325c0ffa6d3734bb8c02eeae91 426 SUPERFAMILY SSF55205 1 424 1.05E-143 T 13-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 VEA_003951 3856cc325c0ffa6d3734bb8c02eeae91 426 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 13-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 VEA_003951 3856cc325c0ffa6d3734bb8c02eeae91 426 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 426 34.525 T 13-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 VEA_003951 3856cc325c0ffa6d3734bb8c02eeae91 426 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 13-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 VEA_003951 3856cc325c0ffa6d3734bb8c02eeae91 426 Gene3D G3DSA:3.65.10.10 20 224 9.9E-160 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 VEA_000237 538e0c250c9dadb1f5acdab0e1486e5d 246 SMART SM00342 165 241 1.6E-5 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_000237 538e0c250c9dadb1f5acdab0e1486e5d 246 Gene3D G3DSA:1.10.10.60 160 245 1.8E-18 T 13-10-2018 VEA_000237 538e0c250c9dadb1f5acdab0e1486e5d 246 SUPERFAMILY SSF46689 194 243 5.38E-6 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_000237 538e0c250c9dadb1f5acdab0e1486e5d 246 Pfam PF12833 Helix-turn-helix domain 169 242 1.3E-17 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_001683 e7e0cbbdfd17d1044a4c28bd27e00c19 315 Gene3D G3DSA:3.40.190.290 99 299 1.0E-57 T 13-10-2018 VEA_001683 e7e0cbbdfd17d1044a4c28bd27e00c19 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 70 4.0E-15 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_001683 e7e0cbbdfd17d1044a4c28bd27e00c19 315 Pfam PF03466 LysR substrate binding domain 95 296 2.5E-41 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_001683 e7e0cbbdfd17d1044a4c28bd27e00c19 315 Gene3D G3DSA:1.10.10.10 9 98 3.8E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001683 e7e0cbbdfd17d1044a4c28bd27e00c19 315 SUPERFAMILY SSF53850 95 301 4.13E-43 T 13-10-2018 VEA_001683 e7e0cbbdfd17d1044a4c28bd27e00c19 315 SUPERFAMILY SSF46785 9 95 1.95E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_003544 21ff5c9ef4a02d2a0e88510678559291 129 Pfam PF13671 AAA domain 6 104 1.3E-13 T 13-10-2018 VEA_003544 21ff5c9ef4a02d2a0e88510678559291 129 Gene3D G3DSA:3.40.50.300 3 129 4.2E-28 T 13-10-2018 VEA_003544 21ff5c9ef4a02d2a0e88510678559291 129 SUPERFAMILY SSF52540 4 123 1.48E-16 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000877 b0a4fe1fed82ed0e293d9e04e39b3093 170 Gene3D G3DSA:3.40.630.30 1 160 3.3E-30 T 13-10-2018 VEA_000877 b0a4fe1fed82ed0e293d9e04e39b3093 170 SUPERFAMILY SSF55729 1 156 4.82E-31 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_000877 b0a4fe1fed82ed0e293d9e04e39b3093 170 Pfam PF00583 Acetyltransferase (GNAT) family 51 139 4.1E-15 T 13-10-2018 IPR000182 GNAT domain VEA_001477 d14dde99bc2ad1e8a563f9689eaad6e1 292 SUPERFAMILY SSF46785 1 86 2.08E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_001477 d14dde99bc2ad1e8a563f9689eaad6e1 292 Gene3D G3DSA:3.40.190.290 93 283 3.2E-36 T 13-10-2018 VEA_001477 d14dde99bc2ad1e8a563f9689eaad6e1 292 Gene3D G3DSA:1.10.10.10 1 88 4.1E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001477 d14dde99bc2ad1e8a563f9689eaad6e1 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.6E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_001477 d14dde99bc2ad1e8a563f9689eaad6e1 292 Pfam PF03466 LysR substrate binding domain 111 287 4.3E-16 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_001477 d14dde99bc2ad1e8a563f9689eaad6e1 292 SUPERFAMILY SSF53850 93 289 1.14E-22 T 13-10-2018 VEA_003494 835ad456ed4b51635801ac1b93976cb8 951 SUPERFAMILY SSF50692 752 951 4.97E-38 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VEA_003494 835ad456ed4b51635801ac1b93976cb8 951 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 19 43 5.5E-4 T 13-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VEA_003494 835ad456ed4b51635801ac1b93976cb8 951 Gene3D G3DSA:2.40.40.20 767 951 1.3E-47 T 13-10-2018 VEA_003494 835ad456ed4b51635801ac1b93976cb8 951 PIRSF PIRSF036643 641 678 370.0 T 13-10-2018 VEA_003494 835ad456ed4b51635801ac1b93976cb8 951 PIRSF PIRSF036643 11 442 1.2E-105 T 13-10-2018 VEA_003494 835ad456ed4b51635801ac1b93976cb8 951 PIRSF PIRSF036643 780 950 8.6E-16 T 13-10-2018 VEA_003494 835ad456ed4b51635801ac1b93976cb8 951 PIRSF PIRSF036643 453 581 1.8E-9 T 13-10-2018 VEA_003494 835ad456ed4b51635801ac1b93976cb8 951 Gene3D G3DSA:3.40.50.740 126 617 1.0E-133 T 13-10-2018 VEA_003494 835ad456ed4b51635801ac1b93976cb8 951 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 62 112 1.7E-11 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEA_003494 835ad456ed4b51635801ac1b93976cb8 951 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 66 83 - T 13-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 VEA_003494 835ad456ed4b51635801ac1b93976cb8 951 SUPERFAMILY SSF53706 60 646 9.42E-202 T 13-10-2018 VEA_003494 835ad456ed4b51635801ac1b93976cb8 951 Pfam PF00384 Molybdopterin oxidoreductase 118 569 1.2E-55 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEA_003494 835ad456ed4b51635801ac1b93976cb8 951 Gene3D G3DSA:2.20.25.90 62 114 3.1E-12 T 13-10-2018 VEA_003494 835ad456ed4b51635801ac1b93976cb8 951 Gene3D G3DSA:3.40.228.10 195 394 1.0E-133 T 13-10-2018 VEA_003494 835ad456ed4b51635801ac1b93976cb8 951 Pfam PF01568 Molydopterin dinucleotide binding domain 818 944 3.4E-20 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VEA_003494 835ad456ed4b51635801ac1b93976cb8 951 SMART SM00926 61 115 3.9E-16 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEA_001021 646e37102267c0c468fabc9641d3ecee 79 SUPERFAMILY SSF54928 2 78 3.76E-24 T 13-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 VEA_001021 646e37102267c0c468fabc9641d3ecee 79 Gene3D G3DSA:3.30.70.330 1 79 2.4E-24 T 13-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VEA_001021 646e37102267c0c468fabc9641d3ecee 79 SMART SM00360 2 75 2.7E-22 T 13-10-2018 IPR000504 RNA recognition motif domain GO:0003676 VEA_001021 646e37102267c0c468fabc9641d3ecee 79 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 72 1.5E-19 T 13-10-2018 IPR000504 RNA recognition motif domain GO:0003676 VEA_003872 7aece4b786aa0efbb0af5cc658756cc3 426 SUPERFAMILY SSF53383 4 420 1.67E-136 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_003872 7aece4b786aa0efbb0af5cc658756cc3 426 Gene3D G3DSA:3.40.640.10 58 327 3.1E-169 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_003872 7aece4b786aa0efbb0af5cc658756cc3 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 276 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEA_003872 7aece4b786aa0efbb0af5cc658756cc3 426 Gene3D G3DSA:3.90.1150.10 7 412 3.1E-169 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEA_003872 7aece4b786aa0efbb0af5cc658756cc3 426 Pfam PF00202 Aminotransferase class-III 24 418 1.8E-128 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEA_003872 7aece4b786aa0efbb0af5cc658756cc3 426 PIRSF PIRSF000521 23 134 1.1E-8 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEA_003872 7aece4b786aa0efbb0af5cc658756cc3 426 PIRSF PIRSF000521 125 421 7.0E-29 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEA_003872 7aece4b786aa0efbb0af5cc658756cc3 426 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 421 48.708 T 13-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 VEA_003872 7aece4b786aa0efbb0af5cc658756cc3 426 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 10 418 7.9E-178 T 13-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 VEA_004007 0e2074e600948c365e054cdcbf98e17d 768 SUPERFAMILY SSF55008 74 141 2.88E-13 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 VEA_004007 0e2074e600948c365e054cdcbf98e17d 768 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 235 736 3.2E-83 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 VEA_004007 0e2074e600948c365e054cdcbf98e17d 768 Pfam PF00403 Heavy-metal-associated domain 77 133 2.1E-11 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VEA_004007 0e2074e600948c365e054cdcbf98e17d 768 SUPERFAMILY SSF56784 462 757 4.95E-52 T 13-10-2018 IPR036412 HAD-like superfamily VEA_004007 0e2074e600948c365e054cdcbf98e17d 768 SUPERFAMILY SSF81665 215 745 6.28E-20 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 VEA_004007 0e2074e600948c365e054cdcbf98e17d 768 Gene3D G3DSA:3.40.50.1000 444 709 5.9E-83 T 13-10-2018 IPR023214 HAD superfamily VEA_004007 0e2074e600948c365e054cdcbf98e17d 768 ProSitePatterns PS01047 Heavy-metal-associated domain. 77 106 - T 13-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 VEA_004007 0e2074e600948c365e054cdcbf98e17d 768 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 212 524 1.5E-94 T 13-10-2018 VEA_004007 0e2074e600948c365e054cdcbf98e17d 768 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 212 759 1.1E-175 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VEA_004007 0e2074e600948c365e054cdcbf98e17d 768 PRINTS PR00941 Cadmium-transporting ATPase signature 86 107 7.5E-9 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VEA_004007 0e2074e600948c365e054cdcbf98e17d 768 PRINTS PR00941 Cadmium-transporting ATPase signature 347 361 7.5E-9 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VEA_004007 0e2074e600948c365e054cdcbf98e17d 768 PRINTS PR00941 Cadmium-transporting ATPase signature 247 267 7.5E-9 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VEA_004007 0e2074e600948c365e054cdcbf98e17d 768 PRINTS PR00941 Cadmium-transporting ATPase signature 175 192 7.5E-9 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VEA_004007 0e2074e600948c365e054cdcbf98e17d 768 SUPERFAMILY SSF81653 266 362 1.7E-22 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 VEA_004007 0e2074e600948c365e054cdcbf98e17d 768 Pfam PF00122 E1-E2 ATPase 263 443 5.4E-49 T 13-10-2018 VEA_004007 0e2074e600948c365e054cdcbf98e17d 768 Pfam PF00702 haloacid dehalogenase-like hydrolase 461 669 2.6E-36 T 13-10-2018 VEA_004007 0e2074e600948c365e054cdcbf98e17d 768 Gene3D G3DSA:2.70.150.20 262 367 7.0E-32 T 13-10-2018 VEA_004007 0e2074e600948c365e054cdcbf98e17d 768 Gene3D G3DSA:3.30.70.100 72 138 4.2E-13 T 13-10-2018 VEA_004007 0e2074e600948c365e054cdcbf98e17d 768 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 465 471 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 VEA_004007 0e2074e600948c365e054cdcbf98e17d 768 Gene3D G3DSA:3.40.1110.10 474 591 5.9E-83 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 VEA_004007 0e2074e600948c365e054cdcbf98e17d 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 584 595 1.0E-27 T 13-10-2018 VEA_004007 0e2074e600948c365e054cdcbf98e17d 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 312 326 1.0E-27 T 13-10-2018 VEA_004007 0e2074e600948c365e054cdcbf98e17d 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 463 477 1.0E-27 T 13-10-2018 VEA_004007 0e2074e600948c365e054cdcbf98e17d 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 657 676 1.0E-27 T 13-10-2018 VEA_004007 0e2074e600948c365e054cdcbf98e17d 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 606 616 1.0E-27 T 13-10-2018 VEA_004007 0e2074e600948c365e054cdcbf98e17d 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 680 692 1.0E-27 T 13-10-2018 VEA_002024 90c7287bb2e2c17265b252bef2fb281e 270 Gene3D G3DSA:1.20.120.220 92 267 3.5E-66 T 13-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_002024 90c7287bb2e2c17265b252bef2fb281e 270 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 268 15.186 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_002024 90c7287bb2e2c17265b252bef2fb281e 270 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 35 263 1.1E-45 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_002024 90c7287bb2e2c17265b252bef2fb281e 270 ProSitePatterns PS00449 ATP synthase a subunit signature. 203 212 - T 13-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_002024 90c7287bb2e2c17265b252bef2fb281e 270 Pfam PF00119 ATP synthase A chain 44 262 8.3E-58 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_002024 90c7287bb2e2c17265b252bef2fb281e 270 SUPERFAMILY SSF81336 93 262 9.55E-50 T 13-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_002024 90c7287bb2e2c17265b252bef2fb281e 270 PRINTS PR00123 ATP synthase A subunit signature 200 222 2.3E-13 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_002024 90c7287bb2e2c17265b252bef2fb281e 270 PRINTS PR00123 ATP synthase A subunit signature 101 117 2.3E-13 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_002024 90c7287bb2e2c17265b252bef2fb281e 270 PRINTS PR00123 ATP synthase A subunit signature 248 263 2.3E-13 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_000784 9bf0e918dcd2cee5e97a7fd565be1e18 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.3E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000784 9bf0e918dcd2cee5e97a7fd565be1e18 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.3E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000784 9bf0e918dcd2cee5e97a7fd565be1e18 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.3E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000784 9bf0e918dcd2cee5e97a7fd565be1e18 307 SUPERFAMILY SSF53850 89 294 4.65E-51 T 13-10-2018 VEA_000784 9bf0e918dcd2cee5e97a7fd565be1e18 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.0E-21 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000784 9bf0e918dcd2cee5e97a7fd565be1e18 307 Gene3D G3DSA:3.40.190.10 92 289 1.4E-72 T 13-10-2018 VEA_000784 9bf0e918dcd2cee5e97a7fd565be1e18 307 Gene3D G3DSA:3.40.190.10 163 263 1.4E-72 T 13-10-2018 VEA_000784 9bf0e918dcd2cee5e97a7fd565be1e18 307 Pfam PF03466 LysR substrate binding domain 88 292 4.3E-50 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_000784 9bf0e918dcd2cee5e97a7fd565be1e18 307 SUPERFAMILY SSF46785 6 88 4.41E-24 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000784 9bf0e918dcd2cee5e97a7fd565be1e18 307 Gene3D G3DSA:1.10.10.10 3 91 2.1E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000665 da616588915853b5e5195da325cc6b69 339 Pfam PF08402 TOBE domain 257 330 7.7E-6 T 13-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VEA_000665 da616588915853b5e5195da325cc6b69 339 Pfam PF00005 ABC transporter 20 161 1.7E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_000665 da616588915853b5e5195da325cc6b69 339 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_000665 da616588915853b5e5195da325cc6b69 339 SMART SM00382 28 211 1.4E-20 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_000665 da616588915853b5e5195da325cc6b69 339 SUPERFAMILY SSF52540 4 240 8.17E-89 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000665 da616588915853b5e5195da325cc6b69 339 Gene3D G3DSA:3.40.50.300 1 237 3.1E-82 T 13-10-2018 VEA_000665 da616588915853b5e5195da325cc6b69 339 SUPERFAMILY SSF50331 250 334 4.19E-7 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VEA_002754 b3d333181587f49ce8e288a7928de2e5 804 Gene3D G3DSA:2.40.160.50 425 804 3.4E-122 T 13-10-2018 VEA_002754 b3d333181587f49ce8e288a7928de2e5 804 Pfam PF07244 Surface antigen variable number repeat 266 344 4.1E-9 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VEA_002754 b3d333181587f49ce8e288a7928de2e5 804 Pfam PF07244 Surface antigen variable number repeat 92 172 8.2E-12 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VEA_002754 b3d333181587f49ce8e288a7928de2e5 804 Pfam PF07244 Surface antigen variable number repeat 347 420 5.6E-17 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VEA_002754 b3d333181587f49ce8e288a7928de2e5 804 Pfam PF07244 Surface antigen variable number repeat 176 263 7.2E-15 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VEA_002754 b3d333181587f49ce8e288a7928de2e5 804 Gene3D G3DSA:3.10.20.310 264 346 6.0E-14 T 13-10-2018 VEA_002754 b3d333181587f49ce8e288a7928de2e5 804 Pfam PF01103 Surface antigen 448 804 5.4E-91 T 13-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 VEA_002754 b3d333181587f49ce8e288a7928de2e5 804 Gene3D G3DSA:3.10.20.310 175 263 2.8E-22 T 13-10-2018 VEA_002754 b3d333181587f49ce8e288a7928de2e5 804 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 804 25.832 T 13-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 VEA_002754 b3d333181587f49ce8e288a7928de2e5 804 PIRSF PIRSF006076 1 804 5.2E-245 T 13-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 VEA_002754 b3d333181587f49ce8e288a7928de2e5 804 Gene3D G3DSA:3.10.20.310 18 91 1.2E-18 T 13-10-2018 VEA_002754 b3d333181587f49ce8e288a7928de2e5 804 Gene3D G3DSA:3.10.20.310 92 174 2.6E-17 T 13-10-2018 VEA_002754 b3d333181587f49ce8e288a7928de2e5 804 Gene3D G3DSA:3.10.20.310 347 424 6.7E-26 T 13-10-2018 VEA_002754 b3d333181587f49ce8e288a7928de2e5 804 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 804 3.9E-278 T 13-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 VEA_001572 037beb988fccad28368acf0a01284af4 242 Pfam PF00005 ABC transporter 18 170 8.5E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_001572 037beb988fccad28368acf0a01284af4 242 SUPERFAMILY SSF52540 3 233 2.52E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001572 037beb988fccad28368acf0a01284af4 242 PIRSF PIRSF039085 1 242 6.1E-92 T 13-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VEA_001572 037beb988fccad28368acf0a01284af4 242 Gene3D G3DSA:3.40.50.300 1 241 1.0E-70 T 13-10-2018 VEA_001572 037beb988fccad28368acf0a01284af4 242 SMART SM00382 27 226 5.6E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_001572 037beb988fccad28368acf0a01284af4 242 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_001215 bb4fb9d62f4d481d61f72a9499dcff8f 181 SMART SM00972 122 178 3.1E-5 T 13-10-2018 IPR007893 Spore coat protein U VEA_001215 bb4fb9d62f4d481d61f72a9499dcff8f 181 Pfam PF05229 Spore Coat Protein U domain 29 178 9.4E-20 T 13-10-2018 IPR007893 Spore coat protein U VEA_001472 1f45b25c1a4c445f69c2696a8569983d 382 Gene3D G3DSA:3.40.50.1970 2 183 2.7E-56 T 13-10-2018 VEA_001472 1f45b25c1a4c445f69c2696a8569983d 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 374 8.3E-128 T 13-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VEA_001472 1f45b25c1a4c445f69c2696a8569983d 382 Gene3D G3DSA:1.20.1090.10 184 382 1.1E-79 T 13-10-2018 VEA_001472 1f45b25c1a4c445f69c2696a8569983d 382 SUPERFAMILY SSF56796 5 381 2.49E-137 T 13-10-2018 VEA_001472 1f45b25c1a4c445f69c2696a8569983d 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 13-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VEA_001472 1f45b25c1a4c445f69c2696a8569983d 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 13-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VEA_002981 306f2a48f55131d2dba5d810da1f12f2 691 SUPERFAMILY SSF57770 147 181 4.32E-13 T 13-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VEA_002981 306f2a48f55131d2dba5d810da1f12f2 691 Gene3D G3DSA:3.40.50.620 13 389 1.7E-161 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_002981 306f2a48f55131d2dba5d810da1f12f2 691 Gene3D G3DSA:2.40.50.140 580 691 2.9E-34 T 13-10-2018 VEA_002981 306f2a48f55131d2dba5d810da1f12f2 691 Pfam PF01588 Putative tRNA binding domain 596 688 6.5E-26 T 13-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 VEA_002981 306f2a48f55131d2dba5d810da1f12f2 691 Gene3D G3DSA:1.10.730.10 394 531 3.4E-35 T 13-10-2018 VEA_002981 306f2a48f55131d2dba5d810da1f12f2 691 SUPERFAMILY SSF47323 394 552 4.8E-45 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEA_002981 306f2a48f55131d2dba5d810da1f12f2 691 Pfam PF09334 tRNA synthetases class I (M) 13 401 3.3E-165 T 13-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEA_002981 306f2a48f55131d2dba5d810da1f12f2 691 Hamap MF_00098 Methionine--tRNA ligase [metG]. 11 550 41.554 T 13-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VEA_002981 306f2a48f55131d2dba5d810da1f12f2 691 SUPERFAMILY SSF52374 10 392 3.18E-101 T 13-10-2018 VEA_002981 306f2a48f55131d2dba5d810da1f12f2 691 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 13 540 3.1E-201 T 13-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VEA_002981 306f2a48f55131d2dba5d810da1f12f2 691 Gene3D G3DSA:2.20.28.20 147 181 1.7E-161 T 13-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VEA_002981 306f2a48f55131d2dba5d810da1f12f2 691 SUPERFAMILY SSF50249 590 690 4.9E-32 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_002981 306f2a48f55131d2dba5d810da1f12f2 691 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 20 31 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEA_002981 306f2a48f55131d2dba5d810da1f12f2 691 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 559 690 1.0E-46 T 13-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VEA_002981 306f2a48f55131d2dba5d810da1f12f2 691 PRINTS PR01041 Methionyl-tRNA synthetase signature 296 311 7.0E-25 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VEA_002981 306f2a48f55131d2dba5d810da1f12f2 691 PRINTS PR01041 Methionyl-tRNA synthetase signature 95 106 7.0E-25 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VEA_002981 306f2a48f55131d2dba5d810da1f12f2 691 PRINTS PR01041 Methionyl-tRNA synthetase signature 15 28 7.0E-25 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VEA_002981 306f2a48f55131d2dba5d810da1f12f2 691 PRINTS PR01041 Methionyl-tRNA synthetase signature 389 400 7.0E-25 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VEA_002981 306f2a48f55131d2dba5d810da1f12f2 691 PRINTS PR01041 Methionyl-tRNA synthetase signature 47 61 7.0E-25 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VEA_002981 306f2a48f55131d2dba5d810da1f12f2 691 PRINTS PR01041 Methionyl-tRNA synthetase signature 256 267 7.0E-25 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VEA_002356 2afa8f30abf2c20369d6e2851db580d7 450 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 13-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VEA_002356 2afa8f30abf2c20369d6e2851db580d7 450 Gene3D G3DSA:3.30.70.260 304 447 3.1E-47 T 13-10-2018 VEA_002356 2afa8f30abf2c20369d6e2851db580d7 450 Gene3D G3DSA:1.20.120.1320 42 135 4.0E-99 T 13-10-2018 VEA_002356 2afa8f30abf2c20369d6e2851db580d7 450 SUPERFAMILY SSF55021 297 394 2.91E-20 T 13-10-2018 VEA_002356 2afa8f30abf2c20369d6e2851db580d7 450 PIRSF PIRSF000726 2 450 9.1E-130 T 13-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VEA_002356 2afa8f30abf2c20369d6e2851db580d7 450 Gene3D G3DSA:3.30.70.260 310 383 3.1E-47 T 13-10-2018 VEA_002356 2afa8f30abf2c20369d6e2851db580d7 450 Pfam PF00696 Amino acid kinase family 6 278 1.6E-46 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VEA_002356 2afa8f30abf2c20369d6e2851db580d7 450 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 6 449 1.1E-122 T 13-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VEA_002356 2afa8f30abf2c20369d6e2851db580d7 450 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 6 449 3.0E-122 T 13-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VEA_002356 2afa8f30abf2c20369d6e2851db580d7 450 Gene3D G3DSA:3.40.1160.10 6 290 4.0E-99 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VEA_002356 2afa8f30abf2c20369d6e2851db580d7 450 SUPERFAMILY SSF53633 6 293 2.88E-76 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VEA_002356 2afa8f30abf2c20369d6e2851db580d7 450 SUPERFAMILY SSF55021 377 449 8.39E-15 T 13-10-2018 VEA_002406 5a8de642ce3d1abf9cf5baca6afd1066 187 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 9 183 1.4E-46 T 13-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related VEA_002406 5a8de642ce3d1abf9cf5baca6afd1066 187 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 3 185 23.89 T 13-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 VEA_002406 5a8de642ce3d1abf9cf5baca6afd1066 187 Gene3D G3DSA:2.60.450.10 59 186 2.6E-38 T 13-10-2018 VEA_002406 5a8de642ce3d1abf9cf5baca6afd1066 187 PIRSF PIRSF028513 2 185 4.8E-30 T 13-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 VEA_002406 5a8de642ce3d1abf9cf5baca6afd1066 187 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 5 182 6.4E-49 T 13-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 VEA_002421 a489776a11e9c097874035c872fe6bcb 406 TIGRFAM TIGR01078 arcA: arginine deiminase 4 406 4.2E-173 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VEA_002421 a489776a11e9c097874035c872fe6bcb 406 Gene3D G3DSA:1.10.3930.10 68 148 6.0E-146 T 13-10-2018 VEA_002421 a489776a11e9c097874035c872fe6bcb 406 SUPERFAMILY SSF55909 3 406 3.21E-129 T 13-10-2018 VEA_002421 a489776a11e9c097874035c872fe6bcb 406 Pfam PF02274 Amidinotransferase 18 403 7.6E-111 T 13-10-2018 VEA_002421 a489776a11e9c097874035c872fe6bcb 406 PIRSF PIRSF006356 1 406 1.6E-155 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VEA_002421 a489776a11e9c097874035c872fe6bcb 406 Gene3D G3DSA:3.75.10.10 6 403 6.0E-146 T 13-10-2018 VEA_002421 a489776a11e9c097874035c872fe6bcb 406 PRINTS PR01466 Bacterial arginine deiminase signature 177 192 2.8E-44 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VEA_002421 a489776a11e9c097874035c872fe6bcb 406 PRINTS PR01466 Bacterial arginine deiminase signature 149 167 2.8E-44 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VEA_002421 a489776a11e9c097874035c872fe6bcb 406 PRINTS PR01466 Bacterial arginine deiminase signature 362 376 2.8E-44 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VEA_002421 a489776a11e9c097874035c872fe6bcb 406 PRINTS PR01466 Bacterial arginine deiminase signature 385 403 2.8E-44 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VEA_002421 a489776a11e9c097874035c872fe6bcb 406 PRINTS PR01466 Bacterial arginine deiminase signature 342 359 2.8E-44 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VEA_002421 a489776a11e9c097874035c872fe6bcb 406 PRINTS PR01466 Bacterial arginine deiminase signature 2 22 2.8E-44 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VEA_002421 a489776a11e9c097874035c872fe6bcb 406 Hamap MF_00242 Arginine deiminase [arcA]. 1 406 45.097 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VEA_000353 581138f59d6799ba15a7d9d8f9cfc6eb 154 SUPERFAMILY SSF82784 1 150 7.2E-47 T 13-10-2018 IPR036102 OsmC/Ohr superfamily VEA_000353 581138f59d6799ba15a7d9d8f9cfc6eb 154 Gene3D G3DSA:3.30.300.20 1 152 1.9E-49 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta VEA_000353 581138f59d6799ba15a7d9d8f9cfc6eb 154 Pfam PF02566 OsmC-like protein 55 150 4.3E-15 T 13-10-2018 IPR003718 OsmC/Ohr family VEA_002447 c29badbf5f42e71ab1c57a6aaa566166 239 Gene3D G3DSA:3.40.50.150 29 239 1.4E-71 T 13-10-2018 VEA_002447 c29badbf5f42e71ab1c57a6aaa566166 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 23 238 30.649 T 13-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 VEA_002447 c29badbf5f42e71ab1c57a6aaa566166 239 Pfam PF02390 Putative methyltransferase 62 232 6.1E-59 T 13-10-2018 VEA_002447 c29badbf5f42e71ab1c57a6aaa566166 239 SUPERFAMILY SSF53335 16 238 1.18E-35 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_002447 c29badbf5f42e71ab1c57a6aaa566166 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 48 238 4.3E-68 T 13-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 VEA_003348 4b04e8a25cf653390f8526b1788c42f7 387 Gene3D G3DSA:1.10.3290.10 74 387 1.6E-118 T 13-10-2018 IPR036597 Fido-like domain superfamily VEA_003348 4b04e8a25cf653390f8526b1788c42f7 387 SUPERFAMILY SSF140931 264 372 8.5E-7 T 13-10-2018 IPR036597 Fido-like domain superfamily VEA_003348 4b04e8a25cf653390f8526b1788c42f7 387 Pfam PF02661 Fic/DOC family 278 362 4.5E-5 T 13-10-2018 IPR003812 Fido domain VEA_000462 5a33049668d4b3898a9cbf7c03f5af7d 383 Gene3D G3DSA:3.40.710.10 23 383 3.1E-118 T 13-10-2018 VEA_000462 5a33049668d4b3898a9cbf7c03f5af7d 383 ProSitePatterns PS00336 Beta-lactamase class-C active site. 82 89 - T 13-10-2018 IPR001586 Beta-lactamase, class-C active site GO:0008800|GO:0017001|GO:0030288 KEGG: 00311+3.5.2.6 VEA_000462 5a33049668d4b3898a9cbf7c03f5af7d 383 Pfam PF00144 Beta-lactamase 34 379 2.9E-72 T 13-10-2018 IPR001466 Beta-lactamase-related VEA_000462 5a33049668d4b3898a9cbf7c03f5af7d 383 SUPERFAMILY SSF56601 27 378 1.11E-85 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VEA_001661 7158549b84d46569e9071bcead5eaff1 284 Pfam PF00226 DnaJ domain 218 278 2.9E-12 T 13-10-2018 IPR001623 DnaJ domain VEA_001661 7158549b84d46569e9071bcead5eaff1 284 SUPERFAMILY SSF46565 215 278 4.34E-17 T 13-10-2018 IPR036869 Chaperone J-domain superfamily VEA_001661 7158549b84d46569e9071bcead5eaff1 284 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 283 39.444 T 13-10-2018 IPR023749 Co-chaperone DjlA GO:0051087 VEA_001661 7158549b84d46569e9071bcead5eaff1 284 PRINTS PR00625 DnaJ domain signature 238 253 3.3E-9 T 13-10-2018 IPR001623 DnaJ domain VEA_001661 7158549b84d46569e9071bcead5eaff1 284 PRINTS PR00625 DnaJ domain signature 262 282 3.3E-9 T 13-10-2018 IPR001623 DnaJ domain VEA_001661 7158549b84d46569e9071bcead5eaff1 284 PRINTS PR00625 DnaJ domain signature 220 238 3.3E-9 T 13-10-2018 IPR001623 DnaJ domain VEA_001661 7158549b84d46569e9071bcead5eaff1 284 Gene3D G3DSA:1.10.3680.10 45 191 1.2E-26 T 13-10-2018 IPR029024 TerB-like VEA_001661 7158549b84d46569e9071bcead5eaff1 284 SUPERFAMILY SSF158682 5 231 9.68E-32 T 13-10-2018 IPR029024 TerB-like VEA_001661 7158549b84d46569e9071bcead5eaff1 284 Gene3D G3DSA:1.10.287.110 195 282 1.6E-16 T 13-10-2018 IPR036869 Chaperone J-domain superfamily VEA_001661 7158549b84d46569e9071bcead5eaff1 284 SMART SM00271 217 282 4.1E-18 T 13-10-2018 IPR001623 DnaJ domain VEA_001661 7158549b84d46569e9071bcead5eaff1 284 Pfam PF05099 Tellurite resistance protein TerB 44 177 8.7E-18 T 13-10-2018 IPR007791 Co-chaperone DjlA, N-terminal VEA_003516 511637321765861e8368bdb37a5af998 672 SUPERFAMILY SSF58104 363 668 1.83E-60 T 13-10-2018 VEA_003516 511637321765861e8368bdb37a5af998 672 SMART SM00283 406 667 1.6E-41 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_003516 511637321765861e8368bdb37a5af998 672 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 314 334 5.2E-21 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEA_003516 511637321765861e8368bdb37a5af998 672 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 533 562 5.2E-21 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEA_003516 511637321765861e8368bdb37a5af998 672 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 504 531 5.2E-21 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEA_003516 511637321765861e8368bdb37a5af998 672 Gene3D G3DSA:1.10.287.950 341 669 9.0E-60 T 13-10-2018 VEA_003516 511637321765861e8368bdb37a5af998 672 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 469 633 8.9E-39 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_004204 c3714b01ae4c59377c300109ac152a7e 418 SUPERFAMILY SSF69742 1 156 7.32E-47 T 13-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VEA_004204 c3714b01ae4c59377c300109ac152a7e 418 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 415 2.9E-144 T 13-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VEA_004204 c3714b01ae4c59377c300109ac152a7e 418 SUPERFAMILY SSF51735 160 313 7.28E-38 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_004204 c3714b01ae4c59377c300109ac152a7e 418 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 5.2E-49 T 13-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VEA_004204 c3714b01ae4c59377c300109ac152a7e 418 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 13-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VEA_004204 c3714b01ae4c59377c300109ac152a7e 418 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 304 1.5E-50 T 13-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase VEA_004204 c3714b01ae4c59377c300109ac152a7e 418 Gene3D G3DSA:3.40.50.720 159 311 1.7E-45 T 13-10-2018 VEA_004204 c3714b01ae4c59377c300109ac152a7e 418 SUPERFAMILY SSF69075 315 416 3.66E-29 T 13-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VEA_004204 c3714b01ae4c59377c300109ac152a7e 418 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 30.747 T 13-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VEA_004204 c3714b01ae4c59377c300109ac152a7e 418 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 318 414 9.9E-24 T 13-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VEA_004204 c3714b01ae4c59377c300109ac152a7e 418 PIRSF PIRSF000445 1 418 2.1E-156 T 13-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VEA_004204 c3714b01ae4c59377c300109ac152a7e 418 Gene3D G3DSA:3.30.460.30 1 156 2.5E-55 T 13-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VEA_001105 ab82b53eae5dcafd1c0ad91c6c34e2cb 748 Gene3D G3DSA:2.60.40.1180 644 747 1.1E-30 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta VEA_001105 ab82b53eae5dcafd1c0ad91c6c34e2cb 748 SUPERFAMILY SSF51011 644 746 1.44E-28 T 13-10-2018 VEA_001105 ab82b53eae5dcafd1c0ad91c6c34e2cb 748 Pfam PF00128 Alpha amylase, catalytic domain 296 370 3.0E-6 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VEA_001105 ab82b53eae5dcafd1c0ad91c6c34e2cb 748 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 112 747 41.481 T 13-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 VEA_001105 ab82b53eae5dcafd1c0ad91c6c34e2cb 748 PIRSF PIRSF000463 30 748 5.3E-287 T 13-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 VEA_001105 ab82b53eae5dcafd1c0ad91c6c34e2cb 748 SMART SM00642 271 616 2.6E-6 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VEA_001105 ab82b53eae5dcafd1c0ad91c6c34e2cb 748 Gene3D G3DSA:3.20.20.80 255 633 6.8E-162 T 13-10-2018 VEA_001105 ab82b53eae5dcafd1c0ad91c6c34e2cb 748 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 149 227 2.7E-19 T 13-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 VEA_001105 ab82b53eae5dcafd1c0ad91c6c34e2cb 748 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 649 746 6.8E-17 T 13-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 VEA_001105 ab82b53eae5dcafd1c0ad91c6c34e2cb 748 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 136 744 3.6E-248 T 13-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 VEA_001105 ab82b53eae5dcafd1c0ad91c6c34e2cb 748 Gene3D G3DSA:2.60.40.10 26 241 8.5E-52 T 13-10-2018 IPR013783 Immunoglobulin-like fold VEA_001105 ab82b53eae5dcafd1c0ad91c6c34e2cb 748 SUPERFAMILY SSF81296 42 125 2.57E-12 T 13-10-2018 IPR014756 Immunoglobulin E-set VEA_001105 ab82b53eae5dcafd1c0ad91c6c34e2cb 748 SUPERFAMILY SSF51445 194 637 6.89E-108 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VEA_002773 d59ecd067d8a1c1f2e385aeff7f443d8 240 Pfam PF00929 Exonuclease 13 180 7.5E-38 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VEA_002773 d59ecd067d8a1c1f2e385aeff7f443d8 240 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 11 239 2.3E-95 T 13-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_002773 d59ecd067d8a1c1f2e385aeff7f443d8 240 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 10 226 3.8E-80 T 13-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_002773 d59ecd067d8a1c1f2e385aeff7f443d8 240 SMART SM00479 11 189 5.4E-51 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VEA_002773 d59ecd067d8a1c1f2e385aeff7f443d8 240 Gene3D G3DSA:3.30.420.10 4 194 2.0E-57 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VEA_002773 d59ecd067d8a1c1f2e385aeff7f443d8 240 SUPERFAMILY SSF53098 11 190 2.6E-53 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VEA_003748 0595cbad1465aa2a2203ff8a1ae7ec8f 364 PIRSF PIRSF000525 2 364 3.8E-152 T 13-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 VEA_003748 0595cbad1465aa2a2203ff8a1ae7ec8f 364 Gene3D G3DSA:3.40.640.10 21 261 7.8E-91 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_003748 0595cbad1465aa2a2203ff8a1ae7ec8f 364 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 8 363 1.9E-160 T 13-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 VEA_003748 0595cbad1465aa2a2203ff8a1ae7ec8f 364 Pfam PF00266 Aminotransferase class-V 8 352 1.0E-61 T 13-10-2018 IPR000192 Aminotransferase class V domain VEA_003748 0595cbad1465aa2a2203ff8a1ae7ec8f 364 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 191 210 - T 13-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VEA_003748 0595cbad1465aa2a2203ff8a1ae7ec8f 364 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 6 363 51.96 T 13-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 VEA_003748 0595cbad1465aa2a2203ff8a1ae7ec8f 364 Gene3D G3DSA:3.90.1150.10 262 364 4.9E-41 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEA_003748 0595cbad1465aa2a2203ff8a1ae7ec8f 364 SUPERFAMILY SSF53383 7 362 3.37E-114 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_003152 9afd9a99a8e175267235cb0e0a0450c3 120 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 4 96 6.4E-33 T 13-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 VEA_003152 9afd9a99a8e175267235cb0e0a0450c3 120 SUPERFAMILY SSF55620 1 118 5.56E-41 T 13-10-2018 VEA_003152 9afd9a99a8e175267235cb0e0a0450c3 120 Gene3D G3DSA:3.30.479.10 1 120 8.5E-50 T 13-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 VEA_003152 9afd9a99a8e175267235cb0e0a0450c3 120 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 5 120 2.1E-35 T 13-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 VEA_003152 9afd9a99a8e175267235cb0e0a0450c3 120 PIRSF PIRSF006113 1 120 3.0E-53 T 13-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 VEA_002378 33d3d292c873cecf814ae8b1e63b5c07 153 SUPERFAMILY SSF54523 10 141 6.59E-8 T 13-10-2018 VEA_002378 33d3d292c873cecf814ae8b1e63b5c07 153 Gene3D G3DSA:3.30.700.10 10 152 4.1E-9 T 13-10-2018 VEA_002378 33d3d292c873cecf814ae8b1e63b5c07 153 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 29 7.8E-7 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEA_002378 33d3d292c873cecf814ae8b1e63b5c07 153 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 29 5.0E-8 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEA_001489 a3eabe55ccec0d8a112fbf581608fbb0 534 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 213 223 - T 13-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site VEA_001489 a3eabe55ccec0d8a112fbf581608fbb0 534 Gene3D G3DSA:3.30.70.80 45 130 3.3E-14 T 13-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 VEA_001489 a3eabe55ccec0d8a112fbf581608fbb0 534 Pfam PF05922 Peptidase inhibitor I9 57 134 1.2E-10 T 13-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 VEA_001489 a3eabe55ccec0d8a112fbf581608fbb0 534 Gene3D G3DSA:2.60.120.380 435 534 6.0E-37 T 13-10-2018 VEA_001489 a3eabe55ccec0d8a112fbf581608fbb0 534 PRINTS PR00723 Subtilisin serine protease family (S8) signature 171 190 1.5E-19 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related VEA_001489 a3eabe55ccec0d8a112fbf581608fbb0 534 PRINTS PR00723 Subtilisin serine protease family (S8) signature 360 376 1.5E-19 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related VEA_001489 a3eabe55ccec0d8a112fbf581608fbb0 534 PRINTS PR00723 Subtilisin serine protease family (S8) signature 209 222 1.5E-19 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related VEA_001489 a3eabe55ccec0d8a112fbf581608fbb0 534 SUPERFAMILY SSF89260 437 523 1.96E-5 T 13-10-2018 VEA_001489 a3eabe55ccec0d8a112fbf581608fbb0 534 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 176 187 - T 13-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site VEA_001489 a3eabe55ccec0d8a112fbf581608fbb0 534 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 361 371 - T 13-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site VEA_001489 a3eabe55ccec0d8a112fbf581608fbb0 534 Pfam PF00082 Subtilase family 171 398 4.5E-35 T 13-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 VEA_001489 a3eabe55ccec0d8a112fbf581608fbb0 534 Gene3D G3DSA:3.40.50.200 144 427 1.5E-99 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 VEA_001489 a3eabe55ccec0d8a112fbf581608fbb0 534 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 453 520 9.2E-15 T 13-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial VEA_001489 a3eabe55ccec0d8a112fbf581608fbb0 534 SUPERFAMILY SSF52743 80 399 1.31E-80 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 VEA_002522 f74996696788bee1561f2fc51714a33e 395 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 65 379 1.9E-74 T 13-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VEA_002522 f74996696788bee1561f2fc51714a33e 395 PIRSF PIRSF000726 60 324 1.8E-73 T 13-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VEA_002522 f74996696788bee1561f2fc51714a33e 395 PIRSF PIRSF000726 3 63 3.7E-23 T 13-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VEA_002522 f74996696788bee1561f2fc51714a33e 395 PIRSF PIRSF000726 303 386 2.1 T 13-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VEA_002522 f74996696788bee1561f2fc51714a33e 395 Pfam PF00696 Amino acid kinase family 5 231 3.9E-52 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VEA_002522 f74996696788bee1561f2fc51714a33e 395 Gene3D G3DSA:3.40.1160.10 4 258 2.0E-86 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VEA_002522 f74996696788bee1561f2fc51714a33e 395 SUPERFAMILY SSF53633 6 241 6.55E-74 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VEA_002522 f74996696788bee1561f2fc51714a33e 395 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 13-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VEA_000836 784ab342b05e5bec768421f4e7ea5281 308 Gene3D G3DSA:3.40.50.1980 191 297 1.4E-20 T 13-10-2018 VEA_000836 784ab342b05e5bec768421f4e7ea5281 308 SUPERFAMILY SSF53807 22 297 3.14E-62 T 13-10-2018 VEA_000836 784ab342b05e5bec768421f4e7ea5281 308 Pfam PF01297 Zinc-uptake complex component A periplasmic 34 295 2.8E-44 T 13-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 VEA_000836 784ab342b05e5bec768421f4e7ea5281 308 PRINTS PR00690 Adhesin family signature 239 257 3.9E-7 T 13-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 VEA_000836 784ab342b05e5bec768421f4e7ea5281 308 PRINTS PR00690 Adhesin family signature 59 72 3.9E-7 T 13-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 VEA_000836 784ab342b05e5bec768421f4e7ea5281 308 PRINTS PR00690 Adhesin family signature 186 207 3.9E-7 T 13-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 VEA_000836 784ab342b05e5bec768421f4e7ea5281 308 PRINTS PR00690 Adhesin family signature 72 89 3.9E-7 T 13-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 VEA_000836 784ab342b05e5bec768421f4e7ea5281 308 Gene3D G3DSA:3.40.50.1980 31 180 4.2E-31 T 13-10-2018 VEA_000836 784ab342b05e5bec768421f4e7ea5281 308 PRINTS PR00691 Adhesin B signature 128 147 2.4E-8 T 13-10-2018 IPR006129 Adhesin B GO:0007155 VEA_000836 784ab342b05e5bec768421f4e7ea5281 308 PRINTS PR00691 Adhesin B signature 53 71 2.4E-8 T 13-10-2018 IPR006129 Adhesin B GO:0007155 VEA_000836 784ab342b05e5bec768421f4e7ea5281 308 PRINTS PR00691 Adhesin B signature 28 49 2.4E-8 T 13-10-2018 IPR006129 Adhesin B GO:0007155 VEA_000836 784ab342b05e5bec768421f4e7ea5281 308 PRINTS PR00691 Adhesin B signature 72 91 2.4E-8 T 13-10-2018 IPR006129 Adhesin B GO:0007155 VEA_000836 784ab342b05e5bec768421f4e7ea5281 308 PRINTS PR00691 Adhesin B signature 235 252 2.4E-8 T 13-10-2018 IPR006129 Adhesin B GO:0007155 VEA_002879 6391c287f6a8b809b329d5b3b4916b2f 504 Gene3D G3DSA:3.60.20.10 2 411 1.9E-158 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VEA_002879 6391c287f6a8b809b329d5b3b4916b2f 504 Pfam PF13522 Glutamine amidotransferase domain 63 206 2.2E-17 T 13-10-2018 VEA_002879 6391c287f6a8b809b329d5b3b4916b2f 504 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 463 45.083 T 13-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 VEA_002879 6391c287f6a8b809b329d5b3b4916b2f 504 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 463 1.0E-166 T 13-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 VEA_002879 6391c287f6a8b809b329d5b3b4916b2f 504 Pfam PF00156 Phosphoribosyl transferase domain 278 389 3.3E-7 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VEA_002879 6391c287f6a8b809b329d5b3b4916b2f 504 SUPERFAMILY SSF53271 249 482 1.1E-69 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like VEA_002879 6391c287f6a8b809b329d5b3b4916b2f 504 PIRSF PIRSF000485 1 479 2.1E-170 T 13-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 VEA_002879 6391c287f6a8b809b329d5b3b4916b2f 504 Gene3D G3DSA:3.40.50.2020 276 440 1.9E-158 T 13-10-2018 VEA_002879 6391c287f6a8b809b329d5b3b4916b2f 504 SUPERFAMILY SSF56235 2 256 3.09E-71 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VEA_001526 94fba596e940c30be65bfd53511e6fc4 477 Gene3D G3DSA:3.30.70.270 44 216 3.7E-45 T 13-10-2018 VEA_001526 94fba596e940c30be65bfd53511e6fc4 477 SMART SM00267 39 204 1.7E-39 T 13-10-2018 IPR000160 GGDEF domain VEA_001526 94fba596e940c30be65bfd53511e6fc4 477 Pfam PF00563 EAL domain 221 453 2.9E-64 T 13-10-2018 IPR001633 EAL domain VEA_001526 94fba596e940c30be65bfd53511e6fc4 477 Gene3D G3DSA:3.20.20.450 217 476 9.2E-82 T 13-10-2018 IPR035919 EAL domain superfamily VEA_001526 94fba596e940c30be65bfd53511e6fc4 477 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 47 200 9.5E-35 T 13-10-2018 IPR000160 GGDEF domain VEA_001526 94fba596e940c30be65bfd53511e6fc4 477 SUPERFAMILY SSF55073 54 202 2.59E-39 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_001526 94fba596e940c30be65bfd53511e6fc4 477 SUPERFAMILY SSF141868 220 467 6.54E-76 T 13-10-2018 IPR035919 EAL domain superfamily VEA_001526 94fba596e940c30be65bfd53511e6fc4 477 SMART SM00052 214 459 1.3E-79 T 13-10-2018 IPR001633 EAL domain VEA_001526 94fba596e940c30be65bfd53511e6fc4 477 Pfam PF00990 Diguanylate cyclase, GGDEF domain 49 199 2.3E-36 T 13-10-2018 IPR000160 GGDEF domain VEA_002948 3c2ed3e45094efdfb6d33f2e3c1359de 198 Pfam PF04060 Putative Fe-S cluster 44 75 1.1E-14 T 13-10-2018 IPR007202 4Fe-4S domain GO:0051536 VEA_002948 3c2ed3e45094efdfb6d33f2e3c1359de 198 Pfam PF14697 4Fe-4S dicluster domain 107 161 5.9E-18 T 13-10-2018 VEA_002948 3c2ed3e45094efdfb6d33f2e3c1359de 198 Gene3D G3DSA:3.30.70.20 82 180 1.4E-22 T 13-10-2018 VEA_002948 3c2ed3e45094efdfb6d33f2e3c1359de 198 PIRSF PIRSF005784 3 188 1.4E-86 T 13-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 VEA_002948 3c2ed3e45094efdfb6d33f2e3c1359de 198 SUPERFAMILY SSF54862 37 173 1.17E-30 T 13-10-2018 VEA_002948 3c2ed3e45094efdfb6d33f2e3c1359de 198 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 186 3.0E-87 T 13-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 VEA_002948 3c2ed3e45094efdfb6d33f2e3c1359de 198 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 4 166 25.91 T 13-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 VEA_002948 3c2ed3e45094efdfb6d33f2e3c1359de 198 Gene3D G3DSA:1.10.15.40 38 81 9.2E-8 T 13-10-2018 VEA_002948 3c2ed3e45094efdfb6d33f2e3c1359de 198 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 144 155 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VEA_002812 0b1c075b415c2a518ff1f3929b8175e1 343 Gene3D G3DSA:3.30.450.20 7 130 5.2E-6 T 13-10-2018 VEA_002812 0b1c075b415c2a518ff1f3929b8175e1 343 Gene3D G3DSA:1.10.287.130 131 185 1.1E-44 T 13-10-2018 VEA_002812 0b1c075b415c2a518ff1f3929b8175e1 343 SUPERFAMILY SSF55874 177 336 2.88E-36 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_002812 0b1c075b415c2a518ff1f3929b8175e1 343 Pfam PF00512 His Kinase A (phospho-acceptor) domain 122 186 4.0E-10 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_002812 0b1c075b415c2a518ff1f3929b8175e1 343 SUPERFAMILY SSF55785 18 85 7.33E-6 T 13-10-2018 IPR035965 PAS domain superfamily VEA_002812 0b1c075b415c2a518ff1f3929b8175e1 343 Gene3D G3DSA:3.30.565.10 186 334 1.1E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_002812 0b1c075b415c2a518ff1f3929b8175e1 343 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 336 1.9E-20 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_002812 0b1c075b415c2a518ff1f3929b8175e1 343 Pfam PF13188 PAS domain 18 72 8.1E-6 T 13-10-2018 IPR000014 PAS domain VEA_002812 0b1c075b415c2a518ff1f3929b8175e1 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 268 282 6.7E-18 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_002812 0b1c075b415c2a518ff1f3929b8175e1 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 286 296 6.7E-18 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_002812 0b1c075b415c2a518ff1f3929b8175e1 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 334 6.7E-18 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_002812 0b1c075b415c2a518ff1f3929b8175e1 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 297 315 6.7E-18 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_002812 0b1c075b415c2a518ff1f3929b8175e1 343 SMART SM00387 231 337 2.7E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_002812 0b1c075b415c2a518ff1f3929b8175e1 343 SMART SM00388 122 188 7.7E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_002812 0b1c075b415c2a518ff1f3929b8175e1 343 SUPERFAMILY SSF47384 111 188 4.51E-10 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEA_001942 15dc94bff7fea06cbf6a08c5b5a8b6bc 447 SMART SM00382 162 305 1.4E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_001942 15dc94bff7fea06cbf6a08c5b5a8b6bc 447 SUPERFAMILY SSF52172 69 185 2.79E-9 T 13-10-2018 IPR011006 CheY-like superfamily VEA_001942 15dc94bff7fea06cbf6a08c5b5a8b6bc 447 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VEA_001942 15dc94bff7fea06cbf6a08c5b5a8b6bc 447 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VEA_001942 15dc94bff7fea06cbf6a08c5b5a8b6bc 447 Pfam PF02954 Bacterial regulatory protein, Fis family 403 444 1.3E-13 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEA_001942 15dc94bff7fea06cbf6a08c5b5a8b6bc 447 SUPERFAMILY SSF46689 354 444 2.37E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_001942 15dc94bff7fea06cbf6a08c5b5a8b6bc 447 Gene3D G3DSA:1.10.10.60 403 445 1.5E-14 T 13-10-2018 VEA_001942 15dc94bff7fea06cbf6a08c5b5a8b6bc 447 Gene3D G3DSA:1.10.8.60 313 377 1.9E-19 T 13-10-2018 VEA_001942 15dc94bff7fea06cbf6a08c5b5a8b6bc 447 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 427 447 1.5E-7 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEA_001942 15dc94bff7fea06cbf6a08c5b5a8b6bc 447 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 410 427 1.5E-7 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEA_001942 15dc94bff7fea06cbf6a08c5b5a8b6bc 447 SUPERFAMILY SSF52540 142 380 6.27E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001942 15dc94bff7fea06cbf6a08c5b5a8b6bc 447 Gene3D G3DSA:3.40.50.300 129 312 2.1E-62 T 13-10-2018 VEA_001942 15dc94bff7fea06cbf6a08c5b5a8b6bc 447 Pfam PF00158 Sigma-54 interaction domain 142 308 1.9E-67 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VEA_001942 15dc94bff7fea06cbf6a08c5b5a8b6bc 447 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VEA_001307 72fa50ee6a15cce90b15c8e659c010fd 258 SUPERFAMILY SSF55804 128 249 3.4E-18 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VEA_001307 72fa50ee6a15cce90b15c8e659c010fd 258 SUPERFAMILY SSF55594 9 88 4.32E-12 T 13-10-2018 IPR035895 HPr-like superfamily VEA_001307 72fa50ee6a15cce90b15c8e659c010fd 258 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 128 251 1.8E-21 T 13-10-2018 IPR002178 PTS EIIA type-2 domain VEA_001307 72fa50ee6a15cce90b15c8e659c010fd 258 Gene3D G3DSA:3.30.1340.10 4 89 1.6E-6 T 13-10-2018 IPR035895 HPr-like superfamily VEA_001307 72fa50ee6a15cce90b15c8e659c010fd 258 PIRSF PIRSF029195 1 258 4.7E-172 T 13-10-2018 IPR016910 Uncharacterised conserved protein UCP029195, PTS-EIIA 2 VEA_001307 72fa50ee6a15cce90b15c8e659c010fd 258 Gene3D G3DSA:3.40.930.10 105 251 5.5E-17 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VEA_003070 d952d4e6714afa2acac941c8baedd6b3 238 SUPERFAMILY SSF53850 24 230 1.09E-39 T 13-10-2018 VEA_003070 d952d4e6714afa2acac941c8baedd6b3 238 Gene3D G3DSA:3.40.190.10 98 202 8.4E-73 T 13-10-2018 VEA_003070 d952d4e6714afa2acac941c8baedd6b3 238 Gene3D G3DSA:3.40.190.10 26 225 8.4E-73 T 13-10-2018 VEA_003070 d952d4e6714afa2acac941c8baedd6b3 238 Pfam PF03466 LysR substrate binding domain 24 225 4.2E-42 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_002568 c5b802723e6d366a748d12bea08812ae 790 Gene3D G3DSA:3.40.710.10 84 741 1.1E-261 T 13-10-2018 VEA_002568 c5b802723e6d366a748d12bea08812ae 790 Pfam PF14814 Bifunctional transglycosylase second domain 94 178 1.1E-26 T 13-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEA_002568 c5b802723e6d366a748d12bea08812ae 790 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 49 772 0.0 T 13-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEA_002568 c5b802723e6d366a748d12bea08812ae 790 Gene3D G3DSA:1.10.3810.10 182 385 1.1E-261 T 13-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEA_002568 c5b802723e6d366a748d12bea08812ae 790 Pfam PF00905 Penicillin binding protein transpeptidase domain 453 691 1.9E-23 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VEA_002568 c5b802723e6d366a748d12bea08812ae 790 PIRSF PIRSF002799 10 790 0.0 T 13-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEA_002568 c5b802723e6d366a748d12bea08812ae 790 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 194 728 1.2E-157 T 13-10-2018 VEA_002568 c5b802723e6d366a748d12bea08812ae 790 SUPERFAMILY SSF53955 187 382 7.59E-69 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily VEA_002568 c5b802723e6d366a748d12bea08812ae 790 Gene3D G3DSA:3.30.2060.10 92 181 1.1E-261 T 13-10-2018 VEA_002568 c5b802723e6d366a748d12bea08812ae 790 Pfam PF00912 Transglycosylase 190 360 1.2E-59 T 13-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEA_002568 c5b802723e6d366a748d12bea08812ae 790 SUPERFAMILY SSF56601 343 777 1.69E-109 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VEA_002835 6c09653ee6d783f35022e29124581902 744 Pfam PF01584 CheW-like domain 608 737 1.8E-23 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VEA_002835 6c09653ee6d783f35022e29124581902 744 SUPERFAMILY SSF47226 6 129 1.96E-30 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 VEA_002835 6c09653ee6d783f35022e29124581902 744 Gene3D G3DSA:3.30.565.10 415 601 8.7E-56 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_002835 6c09653ee6d783f35022e29124581902 744 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 355 414 5.2E-12 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VEA_002835 6c09653ee6d783f35022e29124581902 744 SMART SM01231 354 414 3.2E-17 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VEA_002835 6c09653ee6d783f35022e29124581902 744 Gene3D G3DSA:2.40.50.180 625 690 1.5E-35 T 13-10-2018 VEA_002835 6c09653ee6d783f35022e29124581902 744 SMART SM00387 459 602 7.0E-22 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_002835 6c09653ee6d783f35022e29124581902 744 Gene3D G3DSA:2.30.30.40 602 731 1.5E-35 T 13-10-2018 VEA_002835 6c09653ee6d783f35022e29124581902 744 Pfam PF01627 Hpt domain 8 100 2.7E-16 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VEA_002835 6c09653ee6d783f35022e29124581902 744 SMART SM00260 594 735 1.3E-34 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VEA_002835 6c09653ee6d783f35022e29124581902 744 SUPERFAMILY SSF50341 601 735 1.03E-30 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VEA_002835 6c09653ee6d783f35022e29124581902 744 PRINTS PR00344 Bacterial sensor protein C-terminal signature 586 599 6.8E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_002835 6c09653ee6d783f35022e29124581902 744 PRINTS PR00344 Bacterial sensor protein C-terminal signature 562 580 6.8E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_002835 6c09653ee6d783f35022e29124581902 744 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 556 6.8E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_002835 6c09653ee6d783f35022e29124581902 744 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 518 6.8E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_002835 6c09653ee6d783f35022e29124581902 744 SUPERFAMILY SSF55874 417 600 6.02E-39 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_002835 6c09653ee6d783f35022e29124581902 744 SMART SM00073 6 103 2.2E-19 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VEA_002835 6c09653ee6d783f35022e29124581902 744 Gene3D G3DSA:1.10.287.560 355 414 3.2E-19 T 13-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 VEA_002835 6c09653ee6d783f35022e29124581902 744 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 462 601 8.3E-18 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_002835 6c09653ee6d783f35022e29124581902 744 SUPERFAMILY SSF47384 356 415 7.45E-14 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEA_002835 6c09653ee6d783f35022e29124581902 744 Gene3D G3DSA:1.20.120.160 2 142 1.2E-35 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 VEA_002988 eeb35f4cc988f8331c6aeca6c5539681 1024 SMART SM00316 34 116 1.1E-10 T 13-10-2018 IPR022967 RNA-binding domain, S1 VEA_002988 eeb35f4cc988f8331c6aeca6c5539681 1024 Gene3D G3DSA:2.40.50.140 29 122 3.9E-32 T 13-10-2018 VEA_002988 eeb35f4cc988f8331c6aeca6c5539681 1024 Pfam PF00575 S1 RNA binding domain 34 115 5.1E-14 T 13-10-2018 IPR003029 S1 domain GO:0003676 VEA_002988 eeb35f4cc988f8331c6aeca6c5539681 1024 Gene3D G3DSA:3.40.1260.20 397 505 1.7E-38 T 13-10-2018 VEA_002988 eeb35f4cc988f8331c6aeca6c5539681 1024 SUPERFAMILY SSF50249 37 121 3.73E-19 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_002988 eeb35f4cc988f8331c6aeca6c5539681 1024 Pfam PF10150 Ribonuclease E/G family 118 387 2.2E-94 T 13-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 VEA_002988 eeb35f4cc988f8331c6aeca6c5539681 1024 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 10 421 7.5E-171 T 13-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 VEA_002988 eeb35f4cc988f8331c6aeca6c5539681 1024 Hamap MF_00970 Ribonuclease E [rne]. 1 1011 35.803 T 13-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 VEA_003069 4ea938eaa39d894cffbff7fdd9d3c792 66 Pfam PF14056 Domain of unknown function (DUF4250) 10 61 1.2E-18 T 13-10-2018 IPR025346 Protein of unknown function DUF4250 VEA_000360 1b04fad1bd41289f7a497807000c37c4 237 Pfam PF00881 Nitroreductase family 29 212 2.9E-18 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 VEA_000360 1b04fad1bd41289f7a497807000c37c4 237 SUPERFAMILY SSF55469 25 235 1.44E-55 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VEA_000360 1b04fad1bd41289f7a497807000c37c4 237 Gene3D G3DSA:3.40.109.10 20 236 3.7E-51 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VEA_002993 e29b866864a1de8f3199459873ba6f6e 341 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 335 4.7E-107 T 13-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 VEA_002993 e29b866864a1de8f3199459873ba6f6e 341 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 340 138.206 T 13-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 VEA_002993 e29b866864a1de8f3199459873ba6f6e 341 PIRSF PIRSF002465 2 339 1.2E-124 T 13-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 VEA_002993 e29b866864a1de8f3199459873ba6f6e 341 Pfam PF02504 Fatty acid synthesis protein 5 327 7.1E-102 T 13-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 VEA_002993 e29b866864a1de8f3199459873ba6f6e 341 Gene3D G3DSA:3.40.718.10 2 340 2.9E-121 T 13-10-2018 VEA_002993 e29b866864a1de8f3199459873ba6f6e 341 SUPERFAMILY SSF53659 4 336 1.52E-103 T 13-10-2018 VEA_002533 db32a9abfa2d72fe83951582ed0c79aa 422 Gene3D G3DSA:3.10.580.10 201 330 6.3E-41 T 13-10-2018 VEA_002533 db32a9abfa2d72fe83951582ed0c79aa 422 Gene3D G3DSA:3.30.465.10 340 418 9.5E-26 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 VEA_002533 db32a9abfa2d72fe83951582ed0c79aa 422 SUPERFAMILY SSF56176 340 420 2.73E-20 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VEA_002533 db32a9abfa2d72fe83951582ed0c79aa 422 Pfam PF00571 CBS domain 278 325 2.3E-5 T 13-10-2018 IPR000644 CBS domain VEA_002533 db32a9abfa2d72fe83951582ed0c79aa 422 SUPERFAMILY SSF54631 192 329 4.3E-24 T 13-10-2018 VEA_002533 db32a9abfa2d72fe83951582ed0c79aa 422 Pfam PF01595 Domain of unknown function DUF21 13 181 1.5E-49 T 13-10-2018 IPR002550 CNNM, transmembrane domain VEA_002533 db32a9abfa2d72fe83951582ed0c79aa 422 SMART SM01091 342 420 9.5E-23 T 13-10-2018 IPR005170 Transporter-associated domain VEA_002533 db32a9abfa2d72fe83951582ed0c79aa 422 Pfam PF03471 Transporter associated domain 344 418 1.4E-16 T 13-10-2018 IPR005170 Transporter-associated domain VEA_002199 deca879c7f5bd969fc92ea8b754618bb 650 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 646 52.483 T 13-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 VEA_002199 deca879c7f5bd969fc92ea8b754618bb 650 Gene3D G3DSA:3.40.50.12780 50 516 1.6E-103 T 13-10-2018 VEA_002199 deca879c7f5bd969fc92ea8b754618bb 650 Pfam PF13193 AMP-binding enzyme C-terminal domain 532 610 2.8E-25 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VEA_002199 deca879c7f5bd969fc92ea8b754618bb 650 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 13-10-2018 IPR020845 AMP-binding, conserved site VEA_002199 deca879c7f5bd969fc92ea8b754618bb 650 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 3.2E-20 T 13-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 VEA_002199 deca879c7f5bd969fc92ea8b754618bb 650 SUPERFAMILY SSF56801 9 644 2.49E-182 T 13-10-2018 VEA_002199 deca879c7f5bd969fc92ea8b754618bb 650 Gene3D G3DSA:3.30.300.30 519 650 5.5E-31 T 13-10-2018 VEA_002199 deca879c7f5bd969fc92ea8b754618bb 650 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 644 0.0 T 13-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 VEA_002199 deca879c7f5bd969fc92ea8b754618bb 650 Pfam PF00501 AMP-binding enzyme 83 523 2.2E-91 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VEA_001395 cb28a824a303721ec6c3c60bd7da25d9 1046 Gene3D G3DSA:3.30.2090.10 716 804 5.6E-274 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_001395 cb28a824a303721ec6c3c60bd7da25d9 1046 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1043 0.0 T 13-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 VEA_001395 cb28a824a303721ec6c3c60bd7da25d9 1046 Gene3D G3DSA:3.30.2090.10 182 274 5.6E-274 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_001395 cb28a824a303721ec6c3c60bd7da25d9 1046 SUPERFAMILY SSF82693 137 328 8.11E-23 T 13-10-2018 VEA_001395 cb28a824a303721ec6c3c60bd7da25d9 1046 Pfam PF00873 AcrB/AcrD/AcrF family 5 1032 3.1E-247 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_001395 cb28a824a303721ec6c3c60bd7da25d9 1046 SUPERFAMILY SSF82693 46 127 5.49E-20 T 13-10-2018 VEA_001395 cb28a824a303721ec6c3c60bd7da25d9 1046 Gene3D G3DSA:3.30.70.1430 42 812 5.6E-274 T 13-10-2018 VEA_001395 cb28a824a303721ec6c3c60bd7da25d9 1046 Gene3D G3DSA:1.20.1640.10 15 508 5.6E-274 T 13-10-2018 VEA_001395 cb28a824a303721ec6c3c60bd7da25d9 1046 Gene3D G3DSA:3.30.70.1320 135 328 5.6E-274 T 13-10-2018 VEA_001395 cb28a824a303721ec6c3c60bd7da25d9 1046 SUPERFAMILY SSF82714 716 800 3.27E-18 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_001395 cb28a824a303721ec6c3c60bd7da25d9 1046 Gene3D G3DSA:3.30.70.1430 562 664 5.6E-274 T 13-10-2018 VEA_001395 cb28a824a303721ec6c3c60bd7da25d9 1046 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 7.2E-32 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_001395 cb28a824a303721ec6c3c60bd7da25d9 1046 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 7.2E-32 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_001395 cb28a824a303721ec6c3c60bd7da25d9 1046 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 7.2E-32 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_001395 cb28a824a303721ec6c3c60bd7da25d9 1046 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 7.2E-32 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_001395 cb28a824a303721ec6c3c60bd7da25d9 1046 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 7.2E-32 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_001395 cb28a824a303721ec6c3c60bd7da25d9 1046 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 7.2E-32 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_001395 cb28a824a303721ec6c3c60bd7da25d9 1046 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 7.2E-32 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_001395 cb28a824a303721ec6c3c60bd7da25d9 1046 Gene3D G3DSA:3.30.70.1440 665 862 5.6E-274 T 13-10-2018 VEA_001395 cb28a824a303721ec6c3c60bd7da25d9 1046 SUPERFAMILY SSF82866 294 498 1.7E-42 T 13-10-2018 VEA_001395 cb28a824a303721ec6c3c60bd7da25d9 1046 SUPERFAMILY SSF82714 185 269 3.14E-17 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_001395 cb28a824a303721ec6c3c60bd7da25d9 1046 SUPERFAMILY SSF82866 798 1038 3.27E-52 T 13-10-2018 VEA_001395 cb28a824a303721ec6c3c60bd7da25d9 1046 Gene3D G3DSA:1.20.1640.10 509 1030 5.6E-274 T 13-10-2018 VEA_003604 c6d48b20977afd2e6fc233f68dc42d10 421 PIRSF PIRSF000521 2 128 3.1E-5 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEA_003604 c6d48b20977afd2e6fc233f68dc42d10 421 PIRSF PIRSF000521 174 412 2.4E-31 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEA_003604 c6d48b20977afd2e6fc233f68dc42d10 421 PIRSF PIRSF000521 122 154 6.6 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEA_003604 c6d48b20977afd2e6fc233f68dc42d10 421 Gene3D G3DSA:3.90.1150.10 5 405 2.8E-106 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEA_003604 c6d48b20977afd2e6fc233f68dc42d10 421 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 230 266 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEA_003604 c6d48b20977afd2e6fc233f68dc42d10 421 SUPERFAMILY SSF53383 7 410 1.65E-102 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_003604 c6d48b20977afd2e6fc233f68dc42d10 421 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 2 413 4.4E-149 T 13-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 VEA_003604 c6d48b20977afd2e6fc233f68dc42d10 421 Gene3D G3DSA:3.40.640.10 54 313 2.8E-106 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_003604 c6d48b20977afd2e6fc233f68dc42d10 421 TIGRFAM TIGR02407 ectoine_ectB: diaminobutyrate--2-oxoglutarate aminotransferase 2 410 1.1E-205 T 13-10-2018 IPR012773 Ectoine biosynthetic protein GO:0019491|GO:0030170|GO:0047307 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 VEA_003604 c6d48b20977afd2e6fc233f68dc42d10 421 Pfam PF00202 Aminotransferase class-III 15 409 8.6E-80 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEA_001884 35f10d386712de0551aade14d2e639ab 400 SUPERFAMILY SSF53067 2 144 1.23E-42 T 13-10-2018 VEA_001884 35f10d386712de0551aade14d2e639ab 400 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 5 398 3.3E-95 T 13-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 VEA_001884 35f10d386712de0551aade14d2e639ab 400 SUPERFAMILY SSF53067 147 235 7.12E-24 T 13-10-2018 VEA_001884 35f10d386712de0551aade14d2e639ab 400 Gene3D G3DSA:3.30.420.380 3 234 6.1E-87 T 13-10-2018 VEA_001884 35f10d386712de0551aade14d2e639ab 400 Gene3D G3DSA:3.30.420.370 142 212 6.1E-87 T 13-10-2018 VEA_001884 35f10d386712de0551aade14d2e639ab 400 PIRSF PIRSF015761 13 400 9.0E-37 T 13-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 VEA_001884 35f10d386712de0551aade14d2e639ab 400 Pfam PF12693 GspL periplasmic domain 241 399 1.8E-52 T 13-10-2018 IPR025691 GspL periplasmic domain VEA_001884 35f10d386712de0551aade14d2e639ab 400 Pfam PF05134 Type II secretion system (T2SS), protein L 5 237 3.2E-82 T 13-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain VEA_001884 35f10d386712de0551aade14d2e639ab 400 Gene3D G3DSA:3.30.1360.100 314 400 7.2E-32 T 13-10-2018 VEA_003430 1486d0c855ff67aa64a5692ae1737856 208 Pfam PF04352 ProQ/FINO family 6 113 1.4E-43 T 13-10-2018 IPR016103 ProQ/FinO domain VEA_003430 1486d0c855ff67aa64a5692ae1737856 208 SMART SM00945 3 117 9.3E-66 T 13-10-2018 IPR016103 ProQ/FinO domain VEA_003430 1486d0c855ff67aa64a5692ae1737856 208 SUPERFAMILY SSF48657 4 117 9.02E-41 T 13-10-2018 IPR036442 ProQ/FinO domain superfamily VEA_003430 1486d0c855ff67aa64a5692ae1737856 208 Gene3D G3DSA:1.10.1710.10 1 117 1.1E-25 T 13-10-2018 IPR036442 ProQ/FinO domain superfamily VEA_003430 1486d0c855ff67aa64a5692ae1737856 208 Hamap MF_00749 RNA chaperone ProQ [proQ]. 1 208 30.49 T 13-10-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 VEA_003430 1486d0c855ff67aa64a5692ae1737856 208 Pfam PF17516 ProQ C-terminal domain 159 207 1.1E-22 T 13-10-2018 IPR035236 RNA chaperone ProQ, C-terminal VEA_003541 368732a9a2e91eeb1c8c8e16c577f941 372 SUPERFAMILY SSF53756 15 367 1.73E-70 T 13-10-2018 VEA_003541 368732a9a2e91eeb1c8c8e16c577f941 372 Pfam PF13439 Glycosyltransferase Family 4 26 184 6.8E-19 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 VEA_003541 368732a9a2e91eeb1c8c8e16c577f941 372 Gene3D G3DSA:3.40.50.2000 181 353 7.4E-64 T 13-10-2018 VEA_003541 368732a9a2e91eeb1c8c8e16c577f941 372 Pfam PF00534 Glycosyl transferases group 1 193 339 3.9E-34 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 VEA_003541 368732a9a2e91eeb1c8c8e16c577f941 372 Gene3D G3DSA:3.40.50.2000 40 364 7.4E-64 T 13-10-2018 VEA_004424 d81f331733c80fe60a5170ffc51fe11b 283 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 52 1.1E-12 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_004424 d81f331733c80fe60a5170ffc51fe11b 283 Pfam PF03466 LysR substrate binding domain 83 275 3.8E-13 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_004424 d81f331733c80fe60a5170ffc51fe11b 283 SUPERFAMILY SSF53850 77 275 9.77E-25 T 13-10-2018 VEA_004424 d81f331733c80fe60a5170ffc51fe11b 283 Gene3D G3DSA:3.40.190.290 82 280 5.7E-9 T 13-10-2018 VEA_004424 d81f331733c80fe60a5170ffc51fe11b 283 Gene3D G3DSA:1.10.10.10 1 80 5.0E-15 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_004424 d81f331733c80fe60a5170ffc51fe11b 283 SUPERFAMILY SSF46785 2 73 6.1E-14 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_001809 1acb073f65a8ceacb2358c7cf71b14c5 236 Gene3D G3DSA:1.10.510.10 135 236 4.0E-16 T 13-10-2018 VEA_001809 1acb073f65a8ceacb2358c7cf71b14c5 236 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 2 234 42.771 T 13-10-2018 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 VEA_001809 1acb073f65a8ceacb2358c7cf71b14c5 236 SUPERFAMILY SSF56112 44 199 5.13E-19 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily VEA_001809 1acb073f65a8ceacb2358c7cf71b14c5 236 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 30 232 4.1E-67 T 13-10-2018 VEA_001093 e3d9010b5110491d7421e7480692b952 436 Gene3D G3DSA:1.20.1740.10 1 435 6.2E-62 T 13-10-2018 VEA_001093 e3d9010b5110491d7421e7480692b952 436 PIRSF PIRSF006060 1 432 3.9E-51 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VEA_001093 e3d9010b5110491d7421e7480692b952 436 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 1 430 9.2E-126 T 13-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 VEA_001093 e3d9010b5110491d7421e7480692b952 436 Pfam PF13520 Amino acid permease 9 414 2.5E-46 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VEA_001093 e3d9010b5110491d7421e7480692b952 436 TIGRFAM TIGR04299 antiport_PotE: putrescine-ornithine antiporter 4 431 1.0E-202 T 13-10-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 VEA_001093 e3d9010b5110491d7421e7480692b952 436 Hamap MF_02073 Putrescine transporter PotE [potE]. 8 435 34.559 T 13-10-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 VEA_000169 641091e5938bc4524e8cf7bbf546025f 399 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 3 80 1.7E-33 T 13-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VEA_000169 641091e5938bc4524e8cf7bbf546025f 399 SUPERFAMILY SSF51735 42 152 2.16E-5 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_000169 641091e5938bc4524e8cf7bbf546025f 399 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 84 319 4.1E-99 T 13-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VEA_000169 641091e5938bc4524e8cf7bbf546025f 399 Gene3D G3DSA:3.40.50.720 1 397 2.7E-166 T 13-10-2018 VEA_000169 641091e5938bc4524e8cf7bbf546025f 399 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 395 52.189 T 13-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VEA_000169 641091e5938bc4524e8cf7bbf546025f 399 Pfam PF07055 Enoyl reductase FAD binding domain 326 389 7.2E-25 T 13-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VEA_004293 a8e71687e1dcc20c80e60f5b3989063f 198 SUPERFAMILY SSF58014 44 142 5.23E-30 T 13-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 VEA_004293 a8e71687e1dcc20c80e60f5b3989063f 198 Gene3D G3DSA:2.30.22.10 142 198 5.1E-26 T 13-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 VEA_004293 a8e71687e1dcc20c80e60f5b3989063f 198 Hamap MF_01151 Protein GrpE [grpE]. 2 198 22.79 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VEA_004293 a8e71687e1dcc20c80e60f5b3989063f 198 Gene3D G3DSA:3.90.20.20 35 141 6.7E-33 T 13-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 VEA_004293 a8e71687e1dcc20c80e60f5b3989063f 198 Pfam PF01025 GrpE 39 198 4.2E-56 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VEA_004293 a8e71687e1dcc20c80e60f5b3989063f 198 SUPERFAMILY SSF51064 143 198 6.28E-20 T 13-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 VEA_004293 a8e71687e1dcc20c80e60f5b3989063f 198 PRINTS PR00773 GrpE protein signature 177 196 4.1E-29 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VEA_004293 a8e71687e1dcc20c80e60f5b3989063f 198 PRINTS PR00773 GrpE protein signature 67 83 4.1E-29 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VEA_004293 a8e71687e1dcc20c80e60f5b3989063f 198 PRINTS PR00773 GrpE protein signature 95 110 4.1E-29 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VEA_004293 a8e71687e1dcc20c80e60f5b3989063f 198 PRINTS PR00773 GrpE protein signature 150 165 4.1E-29 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VEA_004293 a8e71687e1dcc20c80e60f5b3989063f 198 ProSitePatterns PS01071 grpE protein signature. 153 196 - T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VEA_004518 196c643c55da2d8493e0639c4cd9f171 194 Gene3D G3DSA:3.40.50.1820 6 194 2.8E-61 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_004518 196c643c55da2d8493e0639c4cd9f171 194 SUPERFAMILY SSF53474 5 192 1.55E-19 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_004518 196c643c55da2d8493e0639c4cd9f171 194 Pfam PF05728 Uncharacterised protein family (UPF0227) 7 192 5.0E-69 T 13-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA VEA_001547 fc48da441c6d0b58251494b7aed78c0a 384 Gene3D G3DSA:2.40.110.10 121 232 5.9E-42 T 13-10-2018 VEA_001547 fc48da441c6d0b58251494b7aed78c0a 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 377 2.6E-50 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VEA_001547 fc48da441c6d0b58251494b7aed78c0a 384 PIRSF PIRSF016578 3 382 1.3E-22 T 13-10-2018 VEA_001547 fc48da441c6d0b58251494b7aed78c0a 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 2.5E-29 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 VEA_001547 fc48da441c6d0b58251494b7aed78c0a 384 Gene3D G3DSA:1.10.540.10 1 117 3.6E-36 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 VEA_001547 fc48da441c6d0b58251494b7aed78c0a 384 Gene3D G3DSA:1.20.140.10 233 383 7.7E-56 T 13-10-2018 VEA_001547 fc48da441c6d0b58251494b7aed78c0a 384 SUPERFAMILY SSF56645 1 240 1.83E-81 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 VEA_001547 fc48da441c6d0b58251494b7aed78c0a 384 SUPERFAMILY SSF47203 225 379 1.32E-60 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 VEA_001547 fc48da441c6d0b58251494b7aed78c0a 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 VEA_001547 fc48da441c6d0b58251494b7aed78c0a 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 1.5E-25 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 VEA_001547 fc48da441c6d0b58251494b7aed78c0a 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 VEA_004413 347cad8567dab3c4acda59e7a01341c0 556 Pfam PF07694 5TMR of 5TMR-LYT 26 194 5.0E-59 T 13-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 VEA_004413 347cad8567dab3c4acda59e7a01341c0 556 SUPERFAMILY SSF55781 227 351 6.13E-8 T 13-10-2018 VEA_004413 347cad8567dab3c4acda59e7a01341c0 556 Pfam PF06580 Histidine kinase 366 444 1.6E-26 T 13-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 VEA_004413 347cad8567dab3c4acda59e7a01341c0 556 Gene3D G3DSA:3.30.565.10 413 556 6.1E-14 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_004413 347cad8567dab3c4acda59e7a01341c0 556 Pfam PF13492 GAF domain 241 351 7.7E-7 T 13-10-2018 IPR003018 GAF domain GO:0005515 VEA_004413 347cad8567dab3c4acda59e7a01341c0 556 SUPERFAMILY SSF55874 428 553 2.05E-12 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_004413 347cad8567dab3c4acda59e7a01341c0 556 Gene3D G3DSA:3.30.450.40 226 352 6.0E-8 T 13-10-2018 IPR029016 GAF-like domain superfamily VEA_001179 798eb6c03b9dd00637698d509e58ebb3 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 6.0E-29 T 13-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 VEA_001179 798eb6c03b9dd00637698d509e58ebb3 89 Pfam PF01313 Bacterial export proteins, family 3 7 77 1.7E-26 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VEA_001179 798eb6c03b9dd00637698d509e58ebb3 89 PIRSF PIRSF004669 1 89 4.6E-26 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VEA_001179 798eb6c03b9dd00637698d509e58ebb3 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 4.8E-14 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VEA_001179 798eb6c03b9dd00637698d509e58ebb3 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 4.8E-14 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VEA_001179 798eb6c03b9dd00637698d509e58ebb3 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 4.8E-14 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VEA_000459 64db0c159e8b23cb20a129caf8161d62 613 SUPERFAMILY SSF52922 505 611 3.73E-12 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VEA_000459 64db0c159e8b23cb20a129caf8161d62 613 TIGRFAM TIGR03710 OAFO_sf: 2-oxoacid:acceptor oxidoreductase, alpha subunit 10 602 1.1E-186 T 13-10-2018 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit KEGG: 00020+1.2.7.3|KEGG: 00720+1.2.7.3|MetaCyc: PWY-5392|MetaCyc: PWY-6969 VEA_000459 64db0c159e8b23cb20a129caf8161d62 613 Gene3D G3DSA:3.40.920.10 7 219 1.9E-11 T 13-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 VEA_000459 64db0c159e8b23cb20a129caf8161d62 613 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 510 581 6.0E-7 T 13-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II VEA_000459 64db0c159e8b23cb20a129caf8161d62 613 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 17 206 3.3E-22 T 13-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 VEA_000459 64db0c159e8b23cb20a129caf8161d62 613 Gene3D G3DSA:3.40.50.970 220 423 6.8E-64 T 13-10-2018 VEA_000459 64db0c159e8b23cb20a129caf8161d62 613 SUPERFAMILY SSF52518 231 490 4.27E-62 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VEA_000459 64db0c159e8b23cb20a129caf8161d62 613 Gene3D G3DSA:3.40.50.920 496 607 8.0E-19 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VEA_000459 64db0c159e8b23cb20a129caf8161d62 613 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 256 438 2.1E-51 T 13-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 VEA_000979 8074cfb2562acaa38e578ae17c09e157 232 Pfam PF00005 ABC transporter 21 169 3.1E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_000979 8074cfb2562acaa38e578ae17c09e157 232 SMART SM00382 30 219 7.2E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_000979 8074cfb2562acaa38e578ae17c09e157 232 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_000979 8074cfb2562acaa38e578ae17c09e157 232 SUPERFAMILY SSF52540 1 223 3.46E-69 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000979 8074cfb2562acaa38e578ae17c09e157 232 Gene3D G3DSA:3.40.50.300 1 229 1.9E-67 T 13-10-2018 VEA_000209 6d094f22389cdd8d9560fcb25c0cee8b 405 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 5 378 1.2E-153 T 13-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VEA_000209 6d094f22389cdd8d9560fcb25c0cee8b 405 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 13-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VEA_000209 6d094f22389cdd8d9560fcb25c0cee8b 405 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 194 204 - T 13-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VEA_000209 6d094f22389cdd8d9560fcb25c0cee8b 405 Gene3D G3DSA:2.160.10.10 287 403 2.0E-32 T 13-10-2018 VEA_000209 6d094f22389cdd8d9560fcb25c0cee8b 405 Gene3D G3DSA:3.90.550.10 1 286 1.4E-92 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEA_000209 6d094f22389cdd8d9560fcb25c0cee8b 405 SUPERFAMILY SSF53448 5 357 2.58E-78 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEA_000209 6d094f22389cdd8d9560fcb25c0cee8b 405 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 96 104 - T 13-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VEA_000209 6d094f22389cdd8d9560fcb25c0cee8b 405 Pfam PF00483 Nucleotidyl transferase 6 272 6.9E-69 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 VEA_000209 6d094f22389cdd8d9560fcb25c0cee8b 405 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 404 49.459 T 13-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VEA_000209 6d094f22389cdd8d9560fcb25c0cee8b 405 SUPERFAMILY SSF51161 312 395 9.27E-17 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily VEA_004021 a456fe2a88ace03d0ed81b182afddac6 1037 SUPERFAMILY SSF82693 554 657 3.14E-17 T 13-10-2018 VEA_004021 a456fe2a88ace03d0ed81b182afddac6 1037 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 9.6E-279 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_004021 a456fe2a88ace03d0ed81b182afddac6 1037 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 9.0E-73 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_004021 a456fe2a88ace03d0ed81b182afddac6 1037 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 9.0E-73 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_004021 a456fe2a88ace03d0ed81b182afddac6 1037 PRINTS PR00702 Acriflavin resistance protein family signature 611 625 9.0E-73 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_004021 a456fe2a88ace03d0ed81b182afddac6 1037 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 9.0E-73 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_004021 a456fe2a88ace03d0ed81b182afddac6 1037 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 9.0E-73 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_004021 a456fe2a88ace03d0ed81b182afddac6 1037 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 9.0E-73 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_004021 a456fe2a88ace03d0ed81b182afddac6 1037 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 9.0E-73 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_004021 a456fe2a88ace03d0ed81b182afddac6 1037 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 9.0E-73 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_004021 a456fe2a88ace03d0ed81b182afddac6 1037 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 9.0E-73 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_004021 a456fe2a88ace03d0ed81b182afddac6 1037 SUPERFAMILY SSF82693 139 324 1.73E-18 T 13-10-2018 VEA_004021 a456fe2a88ace03d0ed81b182afddac6 1037 Gene3D G3DSA:3.30.2090.10 178 269 0.0 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_004021 a456fe2a88ace03d0ed81b182afddac6 1037 SUPERFAMILY SSF82866 794 1009 5.62E-49 T 13-10-2018 VEA_004021 a456fe2a88ace03d0ed81b182afddac6 1037 SUPERFAMILY SSF82866 290 488 6.67E-45 T 13-10-2018 VEA_004021 a456fe2a88ace03d0ed81b182afddac6 1037 Gene3D G3DSA:3.30.70.1440 655 848 0.0 T 13-10-2018 VEA_004021 a456fe2a88ace03d0ed81b182afddac6 1037 Gene3D G3DSA:3.30.70.1430 556 654 0.0 T 13-10-2018 VEA_004021 a456fe2a88ace03d0ed81b182afddac6 1037 SUPERFAMILY SSF82714 704 788 3.53E-18 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_004021 a456fe2a88ace03d0ed81b182afddac6 1037 Gene3D G3DSA:1.20.1640.10 10 501 0.0 T 13-10-2018 VEA_004021 a456fe2a88ace03d0ed81b182afddac6 1037 Gene3D G3DSA:1.20.1640.10 502 1005 0.0 T 13-10-2018 VEA_004021 a456fe2a88ace03d0ed81b182afddac6 1037 Gene3D G3DSA:3.30.70.1320 134 326 0.0 T 13-10-2018 VEA_004021 a456fe2a88ace03d0ed81b182afddac6 1037 SUPERFAMILY SSF82714 183 266 1.7E-13 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_004021 a456fe2a88ace03d0ed81b182afddac6 1037 SUPERFAMILY SSF82693 40 134 9.94E-25 T 13-10-2018 VEA_004021 a456fe2a88ace03d0ed81b182afddac6 1037 Gene3D G3DSA:3.30.2090.10 703 791 0.0 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_004021 a456fe2a88ace03d0ed81b182afddac6 1037 Gene3D G3DSA:3.30.70.1430 40 799 0.0 T 13-10-2018 VEA_001034 c54b0b1ff55f730018af6013b3bf473f 230 SUPERFAMILY SSF50800 3 227 4.45E-71 T 13-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily VEA_001034 c54b0b1ff55f730018af6013b3bf473f 230 Pfam PF03475 3-alpha domain 173 215 9.7E-11 T 13-10-2018 IPR005163 3-alpha domain VEA_001034 c54b0b1ff55f730018af6013b3bf473f 230 Pfam PF03473 MOSC domain 49 163 7.5E-22 T 13-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 VEA_001034 c54b0b1ff55f730018af6013b3bf473f 230 Gene3D G3DSA:2.40.33.20 1 230 7.8E-69 T 13-10-2018 VEA_000969 c8f856b0768a52eee125cf285a06efb8 264 Pfam PF14247 Putative metallopeptidase 28 250 2.6E-65 T 13-10-2018 IPR025644 Putative metallopeptidase VEA_000853 d6a25daa7599aa4689b7e1413cb463d4 239 Gene3D G3DSA:3.20.20.190 1 239 3.4E-73 T 13-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VEA_000853 d6a25daa7599aa4689b7e1413cb463d4 239 SUPERFAMILY SSF51695 6 237 5.65E-69 T 13-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VEA_000853 d6a25daa7599aa4689b7e1413cb463d4 239 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 11 235 2.0E-41 T 13-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 VEA_004367 3401f186fd8873463423469d1ca33855 382 Gene3D G3DSA:3.20.20.105 1 370 2.1E-174 T 13-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VEA_004367 3401f186fd8873463423469d1ca33855 382 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 3 366 57.525 T 13-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VEA_004367 3401f186fd8873463423469d1ca33855 382 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 5 371 1.4E-178 T 13-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VEA_004367 3401f186fd8873463423469d1ca33855 382 SUPERFAMILY SSF51713 3 366 1.96E-164 T 13-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VEA_004367 3401f186fd8873463423469d1ca33855 382 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 5 371 4.2E-187 T 13-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VEA_004367 3401f186fd8873463423469d1ca33855 382 Pfam PF01702 Queuine tRNA-ribosyltransferase 128 363 6.8E-97 T 13-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VEA_000379 b4aabb090c368c72df5b05307e8eeca3 260 Gene3D G3DSA:1.10.12.10 201 260 2.5E-24 T 13-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal VEA_000379 b4aabb090c368c72df5b05307e8eeca3 260 Gene3D G3DSA:3.90.226.10 2 200 2.0E-62 T 13-10-2018 VEA_000379 b4aabb090c368c72df5b05307e8eeca3 260 SUPERFAMILY SSF52096 4 258 5.13E-71 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEA_000379 b4aabb090c368c72df5b05307e8eeca3 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 258 3.0E-48 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 VEA_000475 74b3d48d016299bd8d83e919355a6a49 302 Gene3D G3DSA:3.20.20.100 1 302 2.1E-99 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VEA_000475 74b3d48d016299bd8d83e919355a6a49 302 Pfam PF00248 Aldo/keto reductase family 17 291 5.5E-58 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain VEA_000475 74b3d48d016299bd8d83e919355a6a49 302 SUPERFAMILY SSF51430 7 293 1.01E-68 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VEA_000475 74b3d48d016299bd8d83e919355a6a49 302 PRINTS PR00069 Aldo-keto reductase signature 114 132 2.5E-6 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VEA_000475 74b3d48d016299bd8d83e919355a6a49 302 PRINTS PR00069 Aldo-keto reductase signature 145 162 2.5E-6 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VEA_002100 1c7cf0aaa797a3b3161184baec8c6d68 617 SUPERFAMILY SSF50475 3 322 1.14E-121 T 13-10-2018 VEA_002100 1c7cf0aaa797a3b3161184baec8c6d68 617 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 454 2.9E-164 T 13-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 VEA_002100 1c7cf0aaa797a3b3161184baec8c6d68 617 Gene3D G3DSA:1.20.5.570 584 617 1.3E-15 T 13-10-2018 VEA_002100 1c7cf0aaa797a3b3161184baec8c6d68 617 Gene3D G3DSA:3.40.1670.10 479 583 5.1E-27 T 13-10-2018 VEA_002100 1c7cf0aaa797a3b3161184baec8c6d68 617 Gene3D G3DSA:3.40.1670.10 337 453 1.6E-46 T 13-10-2018 VEA_002100 1c7cf0aaa797a3b3161184baec8c6d68 617 SUPERFAMILY SSF143968 473 615 4.18E-38 T 13-10-2018 VEA_002100 1c7cf0aaa797a3b3161184baec8c6d68 617 SUPERFAMILY SSF143968 323 461 3.92E-53 T 13-10-2018 VEA_002100 1c7cf0aaa797a3b3161184baec8c6d68 617 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 1.1E-161 T 13-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 VEA_002100 1c7cf0aaa797a3b3161184baec8c6d68 617 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 473 569 3.8E-23 T 13-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 VEA_002813 970bcc9dfb06697566ffa29f3c3518ca 469 Gene3D G3DSA:1.10.10.60 401 466 2.4E-10 T 13-10-2018 VEA_002813 970bcc9dfb06697566ffa29f3c3518ca 469 SMART SM00448 4 115 3.7E-32 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_002813 970bcc9dfb06697566ffa29f3c3518ca 469 Pfam PF00158 Sigma-54 interaction domain 134 295 2.1E-65 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VEA_002813 970bcc9dfb06697566ffa29f3c3518ca 469 Gene3D G3DSA:3.40.50.300 120 300 2.6E-64 T 13-10-2018 VEA_002813 970bcc9dfb06697566ffa29f3c3518ca 469 Pfam PF00072 Response regulator receiver domain 6 115 5.7E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_002813 970bcc9dfb06697566ffa29f3c3518ca 469 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 342 351 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VEA_002813 970bcc9dfb06697566ffa29f3c3518ca 469 Gene3D G3DSA:3.40.50.2300 1 119 2.0E-33 T 13-10-2018 VEA_002813 970bcc9dfb06697566ffa29f3c3518ca 469 Gene3D G3DSA:1.10.8.60 301 379 3.4E-30 T 13-10-2018 VEA_002813 970bcc9dfb06697566ffa29f3c3518ca 469 Pfam PF02954 Bacterial regulatory protein, Fis family 420 459 2.7E-12 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEA_002813 970bcc9dfb06697566ffa29f3c3518ca 469 SUPERFAMILY SSF52540 135 370 2.99E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002813 970bcc9dfb06697566ffa29f3c3518ca 469 SUPERFAMILY SSF46689 342 460 7.17E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_002813 970bcc9dfb06697566ffa29f3c3518ca 469 SUPERFAMILY SSF52172 3 173 2.99E-39 T 13-10-2018 IPR011006 CheY-like superfamily VEA_002813 970bcc9dfb06697566ffa29f3c3518ca 469 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 215 230 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VEA_002813 970bcc9dfb06697566ffa29f3c3518ca 469 SMART SM00382 149 296 1.5E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_000672 958b79cdfd9020a4c64b53c133d44026 156 SUPERFAMILY SSF88697 2 155 8.2E-52 T 13-10-2018 IPR015947 PUA-like superfamily VEA_000672 958b79cdfd9020a4c64b53c133d44026 156 Pfam PF04266 ASCH domain 41 153 7.2E-23 T 13-10-2018 IPR007374 ASCH domain VEA_000672 958b79cdfd9020a4c64b53c133d44026 156 Gene3D G3DSA:3.10.400.10 1 153 5.2E-57 T 13-10-2018 VEA_000672 958b79cdfd9020a4c64b53c133d44026 156 SMART SM01022 30 153 4.9E-34 T 13-10-2018 IPR007374 ASCH domain VEA_000672 958b79cdfd9020a4c64b53c133d44026 156 PIRSF PIRSF021320 1 156 8.2E-48 T 13-10-2018 IPR009326 Protein of unknown function DUF984 VEA_002371 72899aa34703a6ac48301fb66be93d4b 574 SMART SM00382 314 435 0.0011 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_002371 72899aa34703a6ac48301fb66be93d4b 574 Gene3D G3DSA:3.30.300.160 63 145 1.5E-5 T 13-10-2018 VEA_002371 72899aa34703a6ac48301fb66be93d4b 574 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 42 148 2.8E-22 T 13-10-2018 IPR007831 General secretory system II, protein E, N-terminal VEA_002371 72899aa34703a6ac48301fb66be93d4b 574 Gene3D G3DSA:3.30.450.90 146 286 8.5E-44 T 13-10-2018 VEA_002371 72899aa34703a6ac48301fb66be93d4b 574 Pfam PF00437 Type II/IV secretion system protein 189 453 4.6E-77 T 13-10-2018 IPR001482 Type II/IV secretion system protein VEA_002371 72899aa34703a6ac48301fb66be93d4b 574 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 381 395 - T 13-10-2018 IPR001482 Type II/IV secretion system protein VEA_002371 72899aa34703a6ac48301fb66be93d4b 574 SUPERFAMILY SSF160246 3 145 2.01E-40 T 13-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily VEA_002371 72899aa34703a6ac48301fb66be93d4b 574 Gene3D G3DSA:3.40.50.300 289 565 6.2E-102 T 13-10-2018 VEA_002371 72899aa34703a6ac48301fb66be93d4b 574 SUPERFAMILY SSF52540 181 558 5.29E-93 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001103 cf3958cb6e9555c481b0c1de3afe32e3 817 Gene3D G3DSA:3.40.50.2000 475 797 2.7E-140 T 13-10-2018 VEA_001103 cf3958cb6e9555c481b0c1de3afe32e3 817 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 10 812 0.0 T 13-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 VEA_001103 cf3958cb6e9555c481b0c1de3afe32e3 817 Pfam PF00343 Carbohydrate phosphorylase 99 812 0.0 T 13-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 VEA_001103 cf3958cb6e9555c481b0c1de3afe32e3 817 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 656 668 - T 13-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 VEA_001103 cf3958cb6e9555c481b0c1de3afe32e3 817 SUPERFAMILY SSF53756 8 815 0.0 T 13-10-2018 VEA_001103 cf3958cb6e9555c481b0c1de3afe32e3 817 PIRSF PIRSF000460 1 817 6.2E-215 T 13-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 VEA_001103 cf3958cb6e9555c481b0c1de3afe32e3 817 Gene3D G3DSA:3.40.50.2000 5 474 7.3E-195 T 13-10-2018 VEA_001645 9d78a1d8864b4b0c735f1aba430eb7d0 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 4.6E-28 T 13-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEA_001645 9d78a1d8864b4b0c735f1aba430eb7d0 470 SUPERFAMILY SSF50800 70 167 1.59E-29 T 13-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily VEA_001645 9d78a1d8864b4b0c735f1aba430eb7d0 470 SUPERFAMILY SSF52935 323 469 7.06E-34 T 13-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEA_001645 9d78a1d8864b4b0c735f1aba430eb7d0 470 Gene3D G3DSA:3.40.1380.20 336 467 2.9E-41 T 13-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEA_001645 9d78a1d8864b4b0c735f1aba430eb7d0 470 Gene3D G3DSA:2.40.33.10 71 167 2.4E-149 T 13-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEA_001645 9d78a1d8864b4b0c735f1aba430eb7d0 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 2.9E-80 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEA_001645 9d78a1d8864b4b0c735f1aba430eb7d0 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 2.9E-80 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEA_001645 9d78a1d8864b4b0c735f1aba430eb7d0 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 2.9E-80 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEA_001645 9d78a1d8864b4b0c735f1aba430eb7d0 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 2.9E-80 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEA_001645 9d78a1d8864b4b0c735f1aba430eb7d0 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 2.9E-80 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEA_001645 9d78a1d8864b4b0c735f1aba430eb7d0 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 2.9E-80 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEA_001645 9d78a1d8864b4b0c735f1aba430eb7d0 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 2.9E-80 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEA_001645 9d78a1d8864b4b0c735f1aba430eb7d0 470 SUPERFAMILY SSF51621 1 339 6.98E-103 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VEA_001645 9d78a1d8864b4b0c735f1aba430eb7d0 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 4.9E-189 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEA_001645 9d78a1d8864b4b0c735f1aba430eb7d0 470 Gene3D G3DSA:3.20.20.60 4 332 2.4E-149 T 13-10-2018 VEA_001645 9d78a1d8864b4b0c735f1aba430eb7d0 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 341 1.5E-155 T 13-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEA_001645 9d78a1d8864b4b0c735f1aba430eb7d0 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 13-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEA_000816 3c22eb8526e0e276c235849951de9c1b 690 SUPERFAMILY SSF55785 301 427 1.45E-12 T 13-10-2018 IPR035965 PAS domain superfamily VEA_000816 3c22eb8526e0e276c235849951de9c1b 690 Pfam PF13426 PAS domain 324 427 2.0E-5 T 13-10-2018 IPR000014 PAS domain VEA_000816 3c22eb8526e0e276c235849951de9c1b 690 SUPERFAMILY SSF47384 452 532 4.32E-8 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEA_000816 3c22eb8526e0e276c235849951de9c1b 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 616 630 5.6E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_000816 3c22eb8526e0e276c235849951de9c1b 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 634 644 5.6E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_000816 3c22eb8526e0e276c235849951de9c1b 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 647 665 5.6E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_000816 3c22eb8526e0e276c235849951de9c1b 690 SMART SM00387 577 687 9.4E-24 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_000816 3c22eb8526e0e276c235849951de9c1b 690 PIRSF PIRSF036431 1 332 2.4E-41 T 13-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) VEA_000816 3c22eb8526e0e276c235849951de9c1b 690 PIRSF PIRSF036431 320 690 6.8E-106 T 13-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) VEA_000816 3c22eb8526e0e276c235849951de9c1b 690 SUPERFAMILY SSF55874 531 686 4.98E-31 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_000816 3c22eb8526e0e276c235849951de9c1b 690 Gene3D G3DSA:3.30.450.20 300 426 2.3E-13 T 13-10-2018 VEA_000816 3c22eb8526e0e276c235849951de9c1b 690 Gene3D G3DSA:3.30.450.20 59 174 6.8E-12 T 13-10-2018 VEA_000816 3c22eb8526e0e276c235849951de9c1b 690 SMART SM00086 389 429 4.8E-4 T 13-10-2018 IPR001610 PAC motif VEA_000816 3c22eb8526e0e276c235849951de9c1b 690 Gene3D G3DSA:1.10.287.130 445 532 1.2E-14 T 13-10-2018 VEA_000816 3c22eb8526e0e276c235849951de9c1b 690 Gene3D G3DSA:3.30.565.10 538 689 1.9E-34 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_000816 3c22eb8526e0e276c235849951de9c1b 690 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 577 685 6.8E-20 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_000816 3c22eb8526e0e276c235849951de9c1b 690 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 309 436 3.7E-14 T 13-10-2018 IPR000014 PAS domain VEA_004386 63dd4112862faaf509112ece48af6449 304 Pfam PF04381 Putative exonuclease, RdgC 1 298 2.3E-125 T 13-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 VEA_004386 63dd4112862faaf509112ece48af6449 304 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 301 38.609 T 13-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 VEA_004498 a1dc48e1e7ff6edebc93182eab096c46 316 PIRSF PIRSF004486 1 316 1.3E-102 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 VEA_004498 a1dc48e1e7ff6edebc93182eab096c46 316 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 315 2.3E-119 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 VEA_004498 a1dc48e1e7ff6edebc93182eab096c46 316 Pfam PF01795 MraW methylase family 5 315 7.6E-111 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 VEA_004498 a1dc48e1e7ff6edebc93182eab096c46 316 Gene3D G3DSA:1.10.150.170 112 218 1.3E-101 T 13-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 VEA_004498 a1dc48e1e7ff6edebc93182eab096c46 316 SUPERFAMILY SSF53335 7 316 1.82E-44 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_004498 a1dc48e1e7ff6edebc93182eab096c46 316 SUPERFAMILY SSF81799 113 216 6.8E-31 T 13-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 VEA_004498 a1dc48e1e7ff6edebc93182eab096c46 316 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 316 38.128 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 VEA_004498 a1dc48e1e7ff6edebc93182eab096c46 316 Gene3D G3DSA:3.40.50.150 10 315 1.3E-101 T 13-10-2018 VEA_002446 04237d783e014d086d34c4129b879618 358 SMART SM00478 37 188 5.9E-47 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 VEA_002446 04237d783e014d086d34c4129b879618 358 SUPERFAMILY SSF48150 3 223 8.32E-75 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 VEA_002446 04237d783e014d086d34c4129b879618 358 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 190 206 - T 13-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 VEA_002446 04237d783e014d086d34c4129b879618 358 Gene3D G3DSA:1.10.340.30 19 130 3.0E-88 T 13-10-2018 VEA_002446 04237d783e014d086d34c4129b879618 358 Gene3D G3DSA:3.90.79.10 223 356 1.0E-16 T 13-10-2018 VEA_002446 04237d783e014d086d34c4129b879618 358 Pfam PF14815 NUDIX domain 243 352 2.3E-21 T 13-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 VEA_002446 04237d783e014d086d34c4129b879618 358 Pfam PF00633 Helix-hairpin-helix motif 97 125 2.2E-5 T 13-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 VEA_002446 04237d783e014d086d34c4129b879618 358 ProSitePatterns PS01155 Endonuclease III family signature. 100 129 - T 13-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 VEA_002446 04237d783e014d086d34c4129b879618 358 Gene3D G3DSA:1.10.1670.10 7 209 3.0E-88 T 13-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 VEA_002446 04237d783e014d086d34c4129b879618 358 SUPERFAMILY SSF55811 218 353 1.72E-25 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VEA_002446 04237d783e014d086d34c4129b879618 358 SMART SM00525 189 209 1.8E-4 T 13-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 VEA_002446 04237d783e014d086d34c4129b879618 358 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 4 270 3.5E-126 T 13-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 VEA_002446 04237d783e014d086d34c4129b879618 358 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 166 1.8E-21 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 VEA_002446 04237d783e014d086d34c4129b879618 358 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 190 206 2.4E-5 T 13-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 VEA_001895 28b4878f83b47b3f88d694ab74c47143 291 Hamap MF_00117 33 kDa chaperonin [hslO]. 3 283 31.728 T 13-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 VEA_001895 28b4878f83b47b3f88d694ab74c47143 291 Pfam PF01430 Hsp33 protein 6 272 2.7E-77 T 13-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 VEA_001895 28b4878f83b47b3f88d694ab74c47143 291 Gene3D G3DSA:3.55.30.10 1 175 6.0E-62 T 13-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 VEA_001895 28b4878f83b47b3f88d694ab74c47143 291 SUPERFAMILY SSF64397 4 231 7.06E-76 T 13-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 VEA_001895 28b4878f83b47b3f88d694ab74c47143 291 SUPERFAMILY SSF118352 223 281 1.7E-17 T 13-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 VEA_001895 28b4878f83b47b3f88d694ab74c47143 291 Gene3D G3DSA:3.90.1280.10 225 284 2.8E-19 T 13-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 VEA_001895 28b4878f83b47b3f88d694ab74c47143 291 PIRSF PIRSF005261 1 284 1.0E-68 T 13-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 VEA_001895 28b4878f83b47b3f88d694ab74c47143 291 Gene3D G3DSA:1.10.287.480 178 224 1.2E-22 T 13-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily VEA_002179 91f55fc18646c745861a6c3bad29073f 307 Gene3D G3DSA:3.40.50.720 34 299 4.0E-94 T 13-10-2018 VEA_002179 91f55fc18646c745861a6c3bad29073f 307 SUPERFAMILY SSF52283 9 120 6.8E-8 T 13-10-2018 VEA_002179 91f55fc18646c745861a6c3bad29073f 307 SUPERFAMILY SSF51735 93 273 5.92E-47 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_002179 91f55fc18646c745861a6c3bad29073f 307 Gene3D G3DSA:3.40.50.720 91 276 4.0E-94 T 13-10-2018 VEA_002179 91f55fc18646c745861a6c3bad29073f 307 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 99 272 1.3E-47 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VEA_003967 95d810190ada30f6f593f41249ab6653 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 267 9.9E-88 T 13-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 VEA_003967 95d810190ada30f6f593f41249ab6653 268 Gene3D G3DSA:3.60.10.10 1 268 5.9E-78 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VEA_003967 95d810190ada30f6f593f41249ab6653 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 260 2.2E-20 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VEA_003967 95d810190ada30f6f593f41249ab6653 268 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 198 214 - T 13-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 VEA_003967 95d810190ada30f6f593f41249ab6653 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 267 1.7E-100 T 13-10-2018 VEA_003967 95d810190ada30f6f593f41249ab6653 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 13-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 VEA_003967 95d810190ada30f6f593f41249ab6653 268 SUPERFAMILY SSF56219 1 268 9.81E-87 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VEA_001412 5f54d7b5ac30f696bebe9eb92c2367d9 147 Gene3D G3DSA:3.40.930.10 1 146 5.1E-48 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VEA_001412 5f54d7b5ac30f696bebe9eb92c2367d9 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 145 1.0E-31 T 13-10-2018 IPR002178 PTS EIIA type-2 domain VEA_001412 5f54d7b5ac30f696bebe9eb92c2367d9 147 SUPERFAMILY SSF55804 1 145 8.89E-36 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VEA_000013 606d4ef05183bafadada5a6aadb8ab35 151 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 14 144 2.6E-40 T 13-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN VEA_000013 606d4ef05183bafadada5a6aadb8ab35 151 Gene3D G3DSA:2.60.40.4150 25 150 7.5E-40 T 13-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily VEA_000013 606d4ef05183bafadada5a6aadb8ab35 151 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 8 146 5.0E-50 T 13-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN VEA_000539 809c217d2c364e40505e86699ceaef38 216 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 216 35.04 T 13-10-2018 IPR007432 Protein of unknown function DUF480 VEA_000539 809c217d2c364e40505e86699ceaef38 216 SUPERFAMILY SSF46785 90 174 1.6E-27 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000539 809c217d2c364e40505e86699ceaef38 216 Pfam PF04337 Protein of unknown function, DUF480 5 158 2.7E-64 T 13-10-2018 IPR007432 Protein of unknown function DUF480 VEA_000539 809c217d2c364e40505e86699ceaef38 216 SUPERFAMILY SSF46785 2 84 4.08E-31 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000539 809c217d2c364e40505e86699ceaef38 216 Gene3D G3DSA:1.10.10.10 1 90 1.4E-35 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000539 809c217d2c364e40505e86699ceaef38 216 Gene3D G3DSA:1.10.10.10 95 175 2.2E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_004019 0c65da26e3d95b57f4049b027fa3c50b 191 Pfam PF13505 Outer membrane protein beta-barrel domain 6 191 1.1E-22 T 13-10-2018 IPR027385 Outer membrane protein beta-barrel VEA_004019 0c65da26e3d95b57f4049b027fa3c50b 191 SUPERFAMILY SSF56925 31 191 1.62E-13 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VEA_004019 0c65da26e3d95b57f4049b027fa3c50b 191 Gene3D G3DSA:2.40.160.20 12 189 4.9E-10 T 13-10-2018 VEA_004345 05ba970e5c7abe4cf6c71c989fbfb8e5 498 Gene3D G3DSA:3.40.50.300 2 160 2.7E-42 T 13-10-2018 VEA_004345 05ba970e5c7abe4cf6c71c989fbfb8e5 498 SUPERFAMILY SSF52540 139 471 1.86E-62 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_004345 05ba970e5c7abe4cf6c71c989fbfb8e5 498 PIRSF PIRSF006485 1 473 1.1E-178 T 13-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 VEA_004345 05ba970e5c7abe4cf6c71c989fbfb8e5 498 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 6.4E-10 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 VEA_004345 05ba970e5c7abe4cf6c71c989fbfb8e5 498 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 6.4E-10 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 VEA_004345 05ba970e5c7abe4cf6c71c989fbfb8e5 498 Pfam PF01926 50S ribosome-binding GTPase 5 120 2.1E-26 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 VEA_004345 05ba970e5c7abe4cf6c71c989fbfb8e5 498 Pfam PF01926 50S ribosome-binding GTPase 212 329 1.4E-24 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 VEA_004345 05ba970e5c7abe4cf6c71c989fbfb8e5 498 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 385 464 3.0E-25 T 13-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like VEA_004345 05ba970e5c7abe4cf6c71c989fbfb8e5 498 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 464 1.2E-177 T 13-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 VEA_004345 05ba970e5c7abe4cf6c71c989fbfb8e5 498 SMART SM00382 1 139 3.7 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_004345 05ba970e5c7abe4cf6c71c989fbfb8e5 498 SMART SM00382 208 355 0.22 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_004345 05ba970e5c7abe4cf6c71c989fbfb8e5 498 SUPERFAMILY SSF52540 4 164 5.75E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_004345 05ba970e5c7abe4cf6c71c989fbfb8e5 498 Hamap MF_00195 GTPase Der [der]. 2 468 39.147 T 13-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 VEA_004345 05ba970e5c7abe4cf6c71c989fbfb8e5 498 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 155 2.8E-21 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VEA_004345 05ba970e5c7abe4cf6c71c989fbfb8e5 498 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 208 373 5.1E-26 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VEA_004345 05ba970e5c7abe4cf6c71c989fbfb8e5 498 Gene3D G3DSA:3.30.300.20 385 467 6.4E-20 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta VEA_004345 05ba970e5c7abe4cf6c71c989fbfb8e5 498 Gene3D G3DSA:3.40.50.300 204 382 4.6E-50 T 13-10-2018 VEA_001807 49e598996376def1b42d9c28bb449cbd 293 Gene3D G3DSA:3.90.550.10 1 292 1.2E-86 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEA_001807 49e598996376def1b42d9c28bb449cbd 293 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 3.1E-159 T 13-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 VEA_001807 49e598996376def1b42d9c28bb449cbd 293 SUPERFAMILY SSF53448 1 285 1.67E-94 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEA_001807 49e598996376def1b42d9c28bb449cbd 293 Pfam PF00483 Nucleotidyl transferase 2 238 1.3E-73 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 VEA_003361 fae7f64810b7a9778aeb84ff5df95e65 88 Pfam PF01313 Bacterial export proteins, family 3 6 77 1.9E-24 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VEA_003361 fae7f64810b7a9778aeb84ff5df95e65 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 2.0E-24 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VEA_003361 fae7f64810b7a9778aeb84ff5df95e65 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 2.0E-24 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VEA_003361 fae7f64810b7a9778aeb84ff5df95e65 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 2.0E-24 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VEA_003361 fae7f64810b7a9778aeb84ff5df95e65 88 TIGRFAM TIGR01403 fliQ_rel_III: type III secretion protein, HrpO family 5 84 7.8E-32 T 13-10-2018 IPR006306 Type III secretion protein HrpO GO:0009306|GO:0016021 VEA_003361 fae7f64810b7a9778aeb84ff5df95e65 88 PIRSF PIRSF004669 1 88 3.5E-26 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VEA_003431 07eb65f65ba5b02e0e6d1dff62b63a19 668 SMART SM00245 326 527 4.7E-61 T 13-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 VEA_003431 07eb65f65ba5b02e0e6d1dff62b63a19 668 Pfam PF08180 B melanoma antigen family 9 36 6.0E-15 T 13-10-2018 IPR012530 B melanoma antigen-like VEA_003431 07eb65f65ba5b02e0e6d1dff62b63a19 668 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 239 320 3.1E-12 T 13-10-2018 IPR001478 PDZ domain GO:0005515 VEA_003431 07eb65f65ba5b02e0e6d1dff62b63a19 668 Pfam PF03572 Peptidase family S41 356 525 1.3E-51 T 13-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 VEA_003431 07eb65f65ba5b02e0e6d1dff62b63a19 668 Gene3D G3DSA:3.90.226.10 325 545 1.0E-57 T 13-10-2018 VEA_003431 07eb65f65ba5b02e0e6d1dff62b63a19 668 SUPERFAMILY SSF50156 217 338 2.87E-14 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 VEA_003431 07eb65f65ba5b02e0e6d1dff62b63a19 668 SUPERFAMILY SSF52096 166 532 6.13E-73 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEA_003431 07eb65f65ba5b02e0e6d1dff62b63a19 668 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 530 662 1.4E-38 T 13-10-2018 IPR020992 Tail specific protease, C-terminal VEA_003431 07eb65f65ba5b02e0e6d1dff62b63a19 668 SMART SM00228 246 323 4.9E-7 T 13-10-2018 IPR001478 PDZ domain GO:0005515 VEA_003431 07eb65f65ba5b02e0e6d1dff62b63a19 668 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 199 547 4.3E-113 T 13-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 VEA_003431 07eb65f65ba5b02e0e6d1dff62b63a19 668 Gene3D G3DSA:2.30.42.10 236 320 3.6E-11 T 13-10-2018 VEA_004172 5db888065ee24994f11bb631420dc5a4 137 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 137 3.0E-51 T 13-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 VEA_004172 5db888065ee24994f11bb631420dc5a4 137 Pfam PF00460 Flagella basal body rod protein 7 32 1.8E-7 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VEA_004172 5db888065ee24994f11bb631420dc5a4 137 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 90 135 2.1E-12 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VEA_004172 5db888065ee24994f11bb631420dc5a4 137 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site VEA_002360 151c21bf10bede3980b7065d279f9627 940 SUPERFAMILY SSF52540 4 568 1.21E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002360 151c21bf10bede3980b7065d279f9627 940 Gene3D G3DSA:3.40.50.300 6 593 5.0E-246 T 13-10-2018 VEA_002360 151c21bf10bede3980b7065d279f9627 940 Gene3D G3DSA:3.40.50.300 616 935 9.1E-141 T 13-10-2018 VEA_002360 151c21bf10bede3980b7065d279f9627 940 Gene3D G3DSA:1.20.1580.10 691 829 9.1E-141 T 13-10-2018 VEA_002360 151c21bf10bede3980b7065d279f9627 940 Gene3D G3DSA:3.30.190.20 130 243 5.0E-246 T 13-10-2018 VEA_002360 151c21bf10bede3980b7065d279f9627 940 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_002360 151c21bf10bede3980b7065d279f9627 940 SUPERFAMILY SSF52540 620 912 4.54E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002360 151c21bf10bede3980b7065d279f9627 940 Gene3D G3DSA:1.20.1580.10 90 491 5.0E-246 T 13-10-2018 VEA_002360 151c21bf10bede3980b7065d279f9627 940 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 939 22.979 T 13-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 VEA_002360 151c21bf10bede3980b7065d279f9627 940 ProSitePatterns PS00211 ABC transporters family signature. 829 843 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_002360 151c21bf10bede3980b7065d279f9627 940 Pfam PF00005 ABC transporter 622 859 2.0E-10 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_002360 151c21bf10bede3980b7065d279f9627 940 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 923 0.0 T 13-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 VEA_002360 151c21bf10bede3980b7065d279f9627 940 Gene3D G3DSA:1.10.8.280 286 402 5.0E-246 T 13-10-2018 VEA_003637 af64711b258652e0490fb967fb45d441 1055 SUPERFAMILY SSF52172 772 896 2.42E-36 T 13-10-2018 IPR011006 CheY-like superfamily VEA_003637 af64711b258652e0490fb967fb45d441 1055 Pfam PF00512 His Kinase A (phospho-acceptor) domain 398 463 5.0E-20 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_003637 af64711b258652e0490fb967fb45d441 1055 Gene3D G3DSA:1.10.287.130 362 461 1.1E-30 T 13-10-2018 VEA_003637 af64711b258652e0490fb967fb45d441 1055 Gene3D G3DSA:3.30.565.10 463 628 2.1E-49 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_003637 af64711b258652e0490fb967fb45d441 1055 SMART SM00388 398 463 1.9E-25 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_003637 af64711b258652e0490fb967fb45d441 1055 SUPERFAMILY SSF52172 932 1054 2.13E-37 T 13-10-2018 IPR011006 CheY-like superfamily VEA_003637 af64711b258652e0490fb967fb45d441 1055 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 511 623 8.3E-30 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_003637 af64711b258652e0490fb967fb45d441 1055 Gene3D G3DSA:3.40.50.2300 992 1054 4.7E-21 T 13-10-2018 VEA_003637 af64711b258652e0490fb967fb45d441 1055 Gene3D G3DSA:3.40.50.2300 829 898 6.4E-21 T 13-10-2018 VEA_003637 af64711b258652e0490fb967fb45d441 1055 Gene3D G3DSA:3.40.50.12330 764 828 6.0E-19 T 13-10-2018 VEA_003637 af64711b258652e0490fb967fb45d441 1055 Gene3D G3DSA:3.40.50.12330 925 991 1.8E-21 T 13-10-2018 VEA_003637 af64711b258652e0490fb967fb45d441 1055 PRINTS PR00344 Bacterial sensor protein C-terminal signature 551 565 1.6E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_003637 af64711b258652e0490fb967fb45d441 1055 PRINTS PR00344 Bacterial sensor protein C-terminal signature 586 604 1.6E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_003637 af64711b258652e0490fb967fb45d441 1055 PRINTS PR00344 Bacterial sensor protein C-terminal signature 610 623 1.6E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_003637 af64711b258652e0490fb967fb45d441 1055 PRINTS PR00344 Bacterial sensor protein C-terminal signature 569 579 1.6E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_003637 af64711b258652e0490fb967fb45d441 1055 SMART SM00448 772 889 8.0E-38 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_003637 af64711b258652e0490fb967fb45d441 1055 SMART SM00448 934 1051 4.6E-38 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_003637 af64711b258652e0490fb967fb45d441 1055 SUPERFAMILY SSF47384 387 463 5.1E-21 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEA_003637 af64711b258652e0490fb967fb45d441 1055 Pfam PF00072 Response regulator receiver domain 774 889 6.1E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_003637 af64711b258652e0490fb967fb45d441 1055 Pfam PF00072 Response regulator receiver domain 936 1051 4.4E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_003637 af64711b258652e0490fb967fb45d441 1055 SUPERFAMILY SSF55874 452 622 1.44E-42 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_003637 af64711b258652e0490fb967fb45d441 1055 SMART SM00387 510 626 4.4E-35 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_000033 86c333ffecf34dc2809e4f4c7c2795da 1018 SUPERFAMILY SSF52540 1 1000 1.68E-32 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000033 86c333ffecf34dc2809e4f4c7c2795da 1018 Pfam PF13558 Putative exonuclease SbcCD, C subunit 904 971 3.2E-12 T 13-10-2018 VEA_000033 86c333ffecf34dc2809e4f4c7c2795da 1018 Gene3D G3DSA:3.40.50.300 641 1012 9.8E-25 T 13-10-2018 VEA_000033 86c333ffecf34dc2809e4f4c7c2795da 1018 Pfam PF13476 AAA domain 5 258 2.2E-25 T 13-10-2018 IPR038729 Rad50/SbcC-type AAA domain VEA_000033 86c333ffecf34dc2809e4f4c7c2795da 1018 Gene3D G3DSA:3.40.50.300 1 298 2.1E-42 T 13-10-2018 VEA_000033 86c333ffecf34dc2809e4f4c7c2795da 1018 SUPERFAMILY SSF57997 602 809 3.33E-5 T 13-10-2018 VEA_004316 25c8e6bb52f0d0cb6d972ee08f8ebd25 293 Pfam PF03466 LysR substrate binding domain 94 292 9.1E-22 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_004316 25c8e6bb52f0d0cb6d972ee08f8ebd25 293 Gene3D G3DSA:1.10.10.10 9 98 1.3E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_004316 25c8e6bb52f0d0cb6d972ee08f8ebd25 293 SUPERFAMILY SSF46785 4 117 2.25E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_004316 25c8e6bb52f0d0cb6d972ee08f8ebd25 293 Gene3D G3DSA:3.40.190.10 166 263 1.1E-57 T 13-10-2018 VEA_004316 25c8e6bb52f0d0cb6d972ee08f8ebd25 293 Gene3D G3DSA:3.40.190.10 103 289 1.1E-57 T 13-10-2018 VEA_004316 25c8e6bb52f0d0cb6d972ee08f8ebd25 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 2.5E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_004316 25c8e6bb52f0d0cb6d972ee08f8ebd25 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 2.5E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_004316 25c8e6bb52f0d0cb6d972ee08f8ebd25 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 2.5E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_004316 25c8e6bb52f0d0cb6d972ee08f8ebd25 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 1.9E-21 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_004316 25c8e6bb52f0d0cb6d972ee08f8ebd25 293 SUPERFAMILY SSF53850 97 292 1.14E-25 T 13-10-2018 VEA_003161 5467c0337b26c44c4c60e1d1b834efd1 505 PIRSF PIRSF001394 1 505 1.2E-217 T 13-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 VEA_003161 5467c0337b26c44c4c60e1d1b834efd1 505 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 325 487 1.8E-51 T 13-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 VEA_003161 5467c0337b26c44c4c60e1d1b834efd1 505 SUPERFAMILY SSF117457 317 489 4.84E-64 T 13-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 VEA_003161 5467c0337b26c44c4c60e1d1b834efd1 505 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 3.4E-98 T 13-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 VEA_003161 5467c0337b26c44c4c60e1d1b834efd1 505 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 284 3.8E-63 T 13-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 VEA_003161 5467c0337b26c44c4c60e1d1b834efd1 505 Pfam PF05683 Fumarase C-terminus 289 490 3.5E-84 T 13-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 VEA_003161 5467c0337b26c44c4c60e1d1b834efd1 505 Gene3D G3DSA:3.20.130.10 305 490 1.3E-62 T 13-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 VEA_001143 518f5dca331965d14a05f229b84fd0d7 296 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 233 2.3E-28 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VEA_001143 518f5dca331965d14a05f229b84fd0d7 296 SUPERFAMILY SSF111369 42 242 4.84E-22 T 13-10-2018 VEA_001143 518f5dca331965d14a05f229b84fd0d7 296 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 42 235 3.0E-17 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VEA_001143 518f5dca331965d14a05f229b84fd0d7 296 Gene3D G3DSA:2.40.50.100 42 102 1.4E-13 T 13-10-2018 VEA_001143 518f5dca331965d14a05f229b84fd0d7 296 Gene3D G3DSA:2.40.30.170 170 295 1.5E-27 T 13-10-2018 VEA_001276 d32e144ecde95d3468897ee1a87ab956 210 SMART SM00421 149 206 3.5E-24 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_001276 d32e144ecde95d3468897ee1a87ab956 210 Gene3D G3DSA:1.10.10.10 144 210 8.8E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001276 d32e144ecde95d3468897ee1a87ab956 210 SUPERFAMILY SSF46894 140 208 1.94E-21 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEA_001276 d32e144ecde95d3468897ee1a87ab956 210 Gene3D G3DSA:3.40.50.2300 3 140 4.9E-27 T 13-10-2018 VEA_001276 d32e144ecde95d3468897ee1a87ab956 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 4.4E-14 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_001276 d32e144ecde95d3468897ee1a87ab956 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 4.4E-14 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_001276 d32e144ecde95d3468897ee1a87ab956 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 4.4E-14 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_001276 d32e144ecde95d3468897ee1a87ab956 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 166 193 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_001276 d32e144ecde95d3468897ee1a87ab956 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 206 5.8E-22 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_001658 c8bce6852801b0a0cbea70b2e6dbb5fb 466 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 VEA_001658 c8bce6852801b0a0cbea70b2e6dbb5fb 466 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 466 60.894 T 13-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 VEA_001658 c8bce6852801b0a0cbea70b2e6dbb5fb 466 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 465 2.7E-267 T 13-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 VEA_001658 c8bce6852801b0a0cbea70b2e6dbb5fb 466 Gene3D G3DSA:3.30.499.20 4 286 4.8E-100 T 13-10-2018 VEA_001658 c8bce6852801b0a0cbea70b2e6dbb5fb 466 SUPERFAMILY SSF53732 1 465 3.01E-166 T 13-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 VEA_001658 c8bce6852801b0a0cbea70b2e6dbb5fb 466 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 VEA_001658 c8bce6852801b0a0cbea70b2e6dbb5fb 466 PRINTS PR00415 Aconitase family signature 82 95 9.0E-51 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEA_001658 c8bce6852801b0a0cbea70b2e6dbb5fb 466 PRINTS PR00415 Aconitase family signature 286 300 9.0E-51 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEA_001658 c8bce6852801b0a0cbea70b2e6dbb5fb 466 PRINTS PR00415 Aconitase family signature 133 148 9.0E-51 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEA_001658 c8bce6852801b0a0cbea70b2e6dbb5fb 466 PRINTS PR00415 Aconitase family signature 209 222 9.0E-51 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEA_001658 c8bce6852801b0a0cbea70b2e6dbb5fb 466 PRINTS PR00415 Aconitase family signature 119 132 9.0E-51 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEA_001658 c8bce6852801b0a0cbea70b2e6dbb5fb 466 PRINTS PR00415 Aconitase family signature 108 116 9.0E-51 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEA_001658 c8bce6852801b0a0cbea70b2e6dbb5fb 466 PRINTS PR00415 Aconitase family signature 195 208 9.0E-51 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEA_001658 c8bce6852801b0a0cbea70b2e6dbb5fb 466 PRINTS PR00415 Aconitase family signature 399 412 9.0E-51 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEA_001658 c8bce6852801b0a0cbea70b2e6dbb5fb 466 PRINTS PR00415 Aconitase family signature 343 354 9.0E-51 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEA_001658 c8bce6852801b0a0cbea70b2e6dbb5fb 466 Gene3D G3DSA:3.30.499.10 327 466 3.0E-49 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 VEA_001658 c8bce6852801b0a0cbea70b2e6dbb5fb 466 Pfam PF00330 Aconitase family (aconitate hydratase) 7 457 1.2E-160 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEA_000680 f884ffb13bd46d8da3ddbedf155420c4 674 SMART SM00838 578 666 1.1E-20 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like VEA_000680 f884ffb13bd46d8da3ddbedf155420c4 674 Pfam PF03764 Elongation factor G, domain IV 457 575 1.6E-36 T 13-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VEA_000680 f884ffb13bd46d8da3ddbedf155420c4 674 Pfam PF00009 Elongation factor Tu GTP binding domain 5 259 2.4E-29 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_000680 f884ffb13bd46d8da3ddbedf155420c4 674 Gene3D G3DSA:2.40.30.10 268 389 5.5E-26 T 13-10-2018 VEA_000680 f884ffb13bd46d8da3ddbedf155420c4 674 Gene3D G3DSA:3.30.230.10 463 666 6.7E-76 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VEA_000680 f884ffb13bd46d8da3ddbedf155420c4 674 SUPERFAMILY SSF50447 243 370 1.34E-21 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VEA_000680 f884ffb13bd46d8da3ddbedf155420c4 674 Pfam PF00679 Elongation factor G C-terminus 579 665 1.4E-24 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like VEA_000680 f884ffb13bd46d8da3ddbedf155420c4 674 Pfam PF14492 Elongation Factor G, domain II 382 454 1.3E-21 T 13-10-2018 VEA_000680 f884ffb13bd46d8da3ddbedf155420c4 674 Gene3D G3DSA:3.30.70.240 582 653 6.7E-76 T 13-10-2018 VEA_000680 f884ffb13bd46d8da3ddbedf155420c4 674 SMART SM00889 458 576 2.0E-53 T 13-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VEA_000680 f884ffb13bd46d8da3ddbedf155420c4 674 SUPERFAMILY SSF54211 457 577 1.26E-37 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEA_000680 f884ffb13bd46d8da3ddbedf155420c4 674 SUPERFAMILY SSF54980 381 457 3.27E-16 T 13-10-2018 IPR035647 EF-G domain III/V-like VEA_000680 f884ffb13bd46d8da3ddbedf155420c4 674 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 141 1.2E-12 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VEA_000680 f884ffb13bd46d8da3ddbedf155420c4 674 SUPERFAMILY SSF54980 579 669 1.53E-20 T 13-10-2018 IPR035647 EF-G domain III/V-like VEA_000680 f884ffb13bd46d8da3ddbedf155420c4 674 Gene3D G3DSA:3.30.70.870 390 459 9.8E-17 T 13-10-2018 VEA_000680 f884ffb13bd46d8da3ddbedf155420c4 674 Gene3D G3DSA:3.40.50.300 1 264 1.1E-52 T 13-10-2018 VEA_000680 f884ffb13bd46d8da3ddbedf155420c4 674 SUPERFAMILY SSF52540 2 259 2.41E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003711 1369c1b1901b7e8d019205030b5e32c1 269 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 13 66 8.2E-8 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VEA_003711 1369c1b1901b7e8d019205030b5e32c1 269 SUPERFAMILY SSF47413 6 71 1.19E-9 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEA_003711 1369c1b1901b7e8d019205030b5e32c1 269 SMART SM00530 12 66 0.0013 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VEA_003711 1369c1b1901b7e8d019205030b5e32c1 269 Gene3D G3DSA:1.10.260.40 2 68 6.6E-6 T 13-10-2018 VEA_000772 984cc518af21ea8d2fddfbd76027ac53 95 Gene3D G3DSA:3.40.50.2300 1 90 1.7E-20 T 13-10-2018 VEA_000772 984cc518af21ea8d2fddfbd76027ac53 95 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 83 2.3E-13 T 13-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VEA_000772 984cc518af21ea8d2fddfbd76027ac53 95 SUPERFAMILY SSF52794 1 90 1.99E-21 T 13-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VEA_002659 4596834b63d9021de5bdf5e7b0b68817 328 SUPERFAMILY SSF47413 1 51 1.22E-12 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEA_002659 4596834b63d9021de5bdf5e7b0b68817 328 Gene3D G3DSA:1.10.260.40 1 60 3.2E-18 T 13-10-2018 VEA_002659 4596834b63d9021de5bdf5e7b0b68817 328 Gene3D G3DSA:3.40.50.2300 79 319 3.5E-45 T 13-10-2018 VEA_002659 4596834b63d9021de5bdf5e7b0b68817 328 Pfam PF13377 Periplasmic binding protein-like domain 167 327 9.1E-31 T 13-10-2018 VEA_002659 4596834b63d9021de5bdf5e7b0b68817 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 49 2.1E-17 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEA_002659 4596834b63d9021de5bdf5e7b0b68817 328 Gene3D G3DSA:3.40.50.2300 159 321 3.5E-45 T 13-10-2018 VEA_002659 4596834b63d9021de5bdf5e7b0b68817 328 SUPERFAMILY SSF53822 77 324 3.73E-43 T 13-10-2018 IPR028082 Periplasmic binding protein-like I VEA_002659 4596834b63d9021de5bdf5e7b0b68817 328 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 13-10-2018 VEA_002659 4596834b63d9021de5bdf5e7b0b68817 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.7E-6 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEA_002659 4596834b63d9021de5bdf5e7b0b68817 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.7E-6 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEA_002659 4596834b63d9021de5bdf5e7b0b68817 328 SMART SM00354 1 74 1.8E-14 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEA_002417 aa6a5c75d02be2ddbb8a29b3277868e0 129 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 104 122 - T 13-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 VEA_002417 aa6a5c75d02be2ddbb8a29b3277868e0 129 Gene3D G3DSA:3.30.1330.40 1 129 2.2E-47 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VEA_002417 aa6a5c75d02be2ddbb8a29b3277868e0 129 SUPERFAMILY SSF55298 2 128 7.38E-44 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VEA_002417 aa6a5c75d02be2ddbb8a29b3277868e0 129 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 127 4.4E-53 T 13-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 VEA_002417 aa6a5c75d02be2ddbb8a29b3277868e0 129 Pfam PF01042 Endoribonuclease L-PSP 8 127 1.3E-44 T 13-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VEA_000651 3f77da8cb54151eab564f9fbfc371a92 419 SUPERFAMILY SSF52374 3 325 3.15E-100 T 13-10-2018 VEA_000651 3f77da8cb54151eab564f9fbfc371a92 419 Gene3D G3DSA:3.10.290.10 328 418 8.7E-23 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VEA_000651 3f77da8cb54151eab564f9fbfc371a92 419 Gene3D G3DSA:3.40.50.620 2 224 1.7E-87 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_000651 3f77da8cb54151eab564f9fbfc371a92 419 Pfam PF01479 S4 domain 355 388 4.8E-5 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_000651 3f77da8cb54151eab564f9fbfc371a92 419 Gene3D G3DSA:1.10.240.10 225 327 1.9E-36 T 13-10-2018 VEA_000651 3f77da8cb54151eab564f9fbfc371a92 419 SUPERFAMILY SSF55174 323 416 5.63E-14 T 13-10-2018 VEA_000651 3f77da8cb54151eab564f9fbfc371a92 419 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 3 416 3.3E-124 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VEA_000651 3f77da8cb54151eab564f9fbfc371a92 419 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 50 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEA_000651 3f77da8cb54151eab564f9fbfc371a92 419 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 3 417 43.984 T 13-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 VEA_000651 3f77da8cb54151eab564f9fbfc371a92 419 Pfam PF00579 tRNA synthetases class I (W and Y) 31 325 2.9E-80 T 13-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEA_000651 3f77da8cb54151eab564f9fbfc371a92 419 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 218 230 6.2E-31 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VEA_000651 3f77da8cb54151eab564f9fbfc371a92 419 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 185 207 6.2E-31 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VEA_000651 3f77da8cb54151eab564f9fbfc371a92 419 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 44 66 6.2E-31 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VEA_000651 3f77da8cb54151eab564f9fbfc371a92 419 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 164 179 6.2E-31 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VEA_002352 d332485e1e9f6c4609c65ce5e0cfc3e4 259 SUPERFAMILY SSF52402 26 213 1.8E-55 T 13-10-2018 VEA_002352 d332485e1e9f6c4609c65ce5e0cfc3e4 259 PIRSF PIRSF000857 6 253 7.7E-57 T 13-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 VEA_002352 d332485e1e9f6c4609c65ce5e0cfc3e4 259 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 53 224 5.5E-50 T 13-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 VEA_002352 d332485e1e9f6c4609c65ce5e0cfc3e4 259 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 14 248 39.442 T 13-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 VEA_002352 d332485e1e9f6c4609c65ce5e0cfc3e4 259 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 38 248 4.6E-88 T 13-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 VEA_002352 d332485e1e9f6c4609c65ce5e0cfc3e4 259 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 26 247 2.0E-92 T 13-10-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 VEA_002352 d332485e1e9f6c4609c65ce5e0cfc3e4 259 Gene3D G3DSA:3.40.50.620 7 221 2.1E-66 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_002098 fc7b353e1cb80b236ed47a08af371ac1 419 SUPERFAMILY SSF52540 90 371 2.93E-68 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002098 fc7b353e1cb80b236ed47a08af371ac1 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 5.2E-22 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEA_002098 fc7b353e1cb80b236ed47a08af371ac1 419 SUPERFAMILY SSF50249 48 125 6.28E-29 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_002098 fc7b353e1cb80b236ed47a08af371ac1 419 SMART SM00382 170 355 6.3E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_002098 fc7b353e1cb80b236ed47a08af371ac1 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 7.0E-220 T 13-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 VEA_002098 fc7b353e1cb80b236ed47a08af371ac1 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 252.642 T 13-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 VEA_002098 fc7b353e1cb80b236ed47a08af371ac1 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 5.0E-32 T 13-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 VEA_002098 fc7b353e1cb80b236ed47a08af371ac1 419 Gene3D G3DSA:1.10.720.10 1 47 2.0E-22 T 13-10-2018 VEA_002098 fc7b353e1cb80b236ed47a08af371ac1 419 Gene3D G3DSA:2.40.50.140 48 117 1.1E-34 T 13-10-2018 VEA_002098 fc7b353e1cb80b236ed47a08af371ac1 419 Gene3D G3DSA:3.40.50.300 130 417 7.3E-134 T 13-10-2018 VEA_002098 fc7b353e1cb80b236ed47a08af371ac1 419 SUPERFAMILY SSF68912 1 46 6.28E-12 T 13-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily VEA_002098 fc7b353e1cb80b236ed47a08af371ac1 419 SMART SM00959 5 47 6.9E-17 T 13-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 VEA_002098 fc7b353e1cb80b236ed47a08af371ac1 419 SMART SM00357 52 118 1.7E-17 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 VEA_002098 fc7b353e1cb80b236ed47a08af371ac1 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 9.9E-17 T 13-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 VEA_001509 ee9ce3b041e427d62f506ffa3d1a7598 244 SUPERFAMILY SSF46785 11 77 1.17E-8 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_001509 ee9ce3b041e427d62f506ffa3d1a7598 244 SMART SM00346 9 99 0.009 T 13-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VEA_001509 ee9ce3b041e427d62f506ffa3d1a7598 244 Pfam PF09339 IclR helix-turn-helix domain 13 59 3.7E-5 T 13-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VEA_001509 ee9ce3b041e427d62f506ffa3d1a7598 244 Pfam PF01614 Bacterial transcriptional regulator 130 238 5.5E-14 T 13-10-2018 IPR014757 Transcription regulator IclR, C-terminal VEA_001509 ee9ce3b041e427d62f506ffa3d1a7598 244 Gene3D G3DSA:1.10.10.10 9 79 1.3E-9 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001509 ee9ce3b041e427d62f506ffa3d1a7598 244 SUPERFAMILY SSF55781 87 240 3.47E-32 T 13-10-2018 VEA_001509 ee9ce3b041e427d62f506ffa3d1a7598 244 Gene3D G3DSA:3.30.450.40 80 240 6.4E-59 T 13-10-2018 IPR029016 GAF-like domain superfamily VEA_004096 f646f8cb3bab327b6c24e28b66c5a598 277 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 277 45.114 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VEA_004096 f646f8cb3bab327b6c24e28b66c5a598 277 Gene3D G3DSA:3.40.50.170 81 277 2.0E-67 T 13-10-2018 VEA_004096 f646f8cb3bab327b6c24e28b66c5a598 277 SUPERFAMILY SSF55021 4 55 2.33E-8 T 13-10-2018 VEA_004096 f646f8cb3bab327b6c24e28b66c5a598 277 Pfam PF00551 Formyl transferase 82 259 4.6E-49 T 13-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VEA_004096 f646f8cb3bab327b6c24e28b66c5a598 277 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 277 1.9E-122 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VEA_004096 f646f8cb3bab327b6c24e28b66c5a598 277 Gene3D G3DSA:3.30.70.260 1 77 4.0E-15 T 13-10-2018 VEA_004096 f646f8cb3bab327b6c24e28b66c5a598 277 PIRSF PIRSF036480 1 277 3.8E-112 T 13-10-2018 VEA_004096 f646f8cb3bab327b6c24e28b66c5a598 277 SUPERFAMILY SSF53328 82 276 1.83E-60 T 13-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VEA_004096 f646f8cb3bab327b6c24e28b66c5a598 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 229 251 9.3E-65 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VEA_004096 f646f8cb3bab327b6c24e28b66c5a598 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 83 105 9.3E-65 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VEA_004096 f646f8cb3bab327b6c24e28b66c5a598 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 105 132 9.3E-65 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VEA_004096 f646f8cb3bab327b6c24e28b66c5a598 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 251 276 9.3E-65 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VEA_004096 f646f8cb3bab327b6c24e28b66c5a598 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 9.3E-65 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VEA_004096 f646f8cb3bab327b6c24e28b66c5a598 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 9.3E-65 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VEA_004096 f646f8cb3bab327b6c24e28b66c5a598 277 Pfam PF01842 ACT domain 5 65 1.2E-6 T 13-10-2018 IPR002912 ACT domain VEA_004211 d740a252fdf16bceb495fca3a60114dc 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 13-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 VEA_004211 d740a252fdf16bceb495fca3a60114dc 474 SMART SM00729 147 367 8.1E-64 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VEA_004211 d740a252fdf16bceb495fca3a60114dc 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 2.7E-199 T 13-10-2018 VEA_004211 d740a252fdf16bceb495fca3a60114dc 474 SUPERFAMILY SSF102114 123 374 7.06E-62 T 13-10-2018 VEA_004211 d740a252fdf16bceb495fca3a60114dc 474 Gene3D G3DSA:3.40.50.12160 3 138 2.0E-34 T 13-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily VEA_004211 d740a252fdf16bceb495fca3a60114dc 474 Pfam PF01938 TRAM domain 379 440 4.2E-17 T 13-10-2018 IPR002792 TRAM domain VEA_004211 d740a252fdf16bceb495fca3a60114dc 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 73.081 T 13-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 VEA_004211 d740a252fdf16bceb495fca3a60114dc 474 Gene3D G3DSA:3.80.30.20 145 377 5.6E-84 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VEA_004211 d740a252fdf16bceb495fca3a60114dc 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 6.8E-30 T 13-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 VEA_004211 d740a252fdf16bceb495fca3a60114dc 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 8.0E-153 T 13-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 VEA_004211 d740a252fdf16bceb495fca3a60114dc 474 Pfam PF04055 Radical SAM superfamily 151 325 1.0E-27 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VEA_003359 ca25ec993244f8622a870946aebaaabc 351 Gene3D G3DSA:3.40.1690.10 211 351 6.4E-55 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal VEA_003359 ca25ec993244f8622a870946aebaaabc 351 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 202 220 2.7E-44 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VEA_003359 ca25ec993244f8622a870946aebaaabc 351 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 222 239 2.7E-44 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VEA_003359 ca25ec993244f8622a870946aebaaabc 351 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 296 317 2.7E-44 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VEA_003359 ca25ec993244f8622a870946aebaaabc 351 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 266 281 2.7E-44 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VEA_003359 ca25ec993244f8622a870946aebaaabc 351 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 6 28 2.7E-44 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VEA_003359 ca25ec993244f8622a870946aebaaabc 351 TIGRFAM TIGR01404 FlhB_rel_III: type III secretion protein, YscU/HrpY family 3 343 6.0E-135 T 13-10-2018 IPR006307 Type III exporter system, secretion apparatus protein BsaZ GO:0009306|GO:0016021 VEA_003359 ca25ec993244f8622a870946aebaaabc 351 Pfam PF01312 FlhB HrpN YscU SpaS Family 4 340 1.8E-113 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VEA_003359 ca25ec993244f8622a870946aebaaabc 351 SUPERFAMILY SSF160544 238 345 7.19E-33 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal VEA_003056 cd82103226191cd18f41bd1485ed7c9f 354 Gene3D G3DSA:2.40.50.100 43 234 2.1E-39 T 13-10-2018 VEA_003056 cd82103226191cd18f41bd1485ed7c9f 354 Pfam PF13437 HlyD family secretion protein 200 268 3.1E-6 T 13-10-2018 VEA_003056 cd82103226191cd18f41bd1485ed7c9f 354 Pfam PF13533 Biotin-lipoyl like 44 88 8.6E-17 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VEA_003056 cd82103226191cd18f41bd1485ed7c9f 354 Gene3D G3DSA:1.10.287.470 77 199 2.1E-39 T 13-10-2018 VEA_003056 cd82103226191cd18f41bd1485ed7c9f 354 SUPERFAMILY SSF111369 109 166 5.1E-6 T 13-10-2018 VEA_003056 cd82103226191cd18f41bd1485ed7c9f 354 SUPERFAMILY SSF111369 179 253 1.57E-5 T 13-10-2018 VEA_003056 cd82103226191cd18f41bd1485ed7c9f 354 Gene3D G3DSA:2.40.30.170 38 311 2.1E-39 T 13-10-2018 VEA_003056 cd82103226191cd18f41bd1485ed7c9f 354 SUPERFAMILY SSF111369 38 96 1.06E-9 T 13-10-2018 VEA_003056 cd82103226191cd18f41bd1485ed7c9f 354 Gene3D G3DSA:2.40.420.20 313 324 2.1E-39 T 13-10-2018 VEA_004351 e1e8d58d21732da5721a8cdf9e4cf677 375 Gene3D G3DSA:1.10.150.530 1 67 2.2E-25 T 13-10-2018 VEA_004351 e1e8d58d21732da5721a8cdf9e4cf677 375 Gene3D G3DSA:3.20.20.70 68 338 1.1E-111 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_004351 e1e8d58d21732da5721a8cdf9e4cf677 375 SUPERFAMILY SSF102114 103 312 2.49E-13 T 13-10-2018 VEA_004351 e1e8d58d21732da5721a8cdf9e4cf677 375 Pfam PF04055 Radical SAM superfamily 109 283 1.3E-14 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VEA_004351 e1e8d58d21732da5721a8cdf9e4cf677 375 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 5 353 71.451 T 13-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 VEA_004351 e1e8d58d21732da5721a8cdf9e4cf677 375 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 359 3.4E-159 T 13-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 VEA_004351 e1e8d58d21732da5721a8cdf9e4cf677 375 PIRSF PIRSF006004 3 366 4.4E-143 T 13-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 VEA_001027 ef48e0fc4f944485d2749aada89c3ddf 616 Gene3D G3DSA:1.20.1560.10 9 338 4.4E-25 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEA_001027 ef48e0fc4f944485d2749aada89c3ddf 616 Pfam PF00005 ABC transporter 379 531 3.0E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_001027 ef48e0fc4f944485d2749aada89c3ddf 616 Gene3D G3DSA:3.40.50.300 351 609 1.6E-91 T 13-10-2018 VEA_001027 ef48e0fc4f944485d2749aada89c3ddf 616 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_001027 ef48e0fc4f944485d2749aada89c3ddf 616 SMART SM00382 386 577 4.7E-19 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_001027 ef48e0fc4f944485d2749aada89c3ddf 616 SUPERFAMILY SSF52540 351 601 3.62E-89 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001027 ef48e0fc4f944485d2749aada89c3ddf 616 Pfam PF00664 ABC transporter transmembrane region 40 308 1.2E-16 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VEA_001027 ef48e0fc4f944485d2749aada89c3ddf 616 SUPERFAMILY SSF90123 28 347 3.53E-51 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEA_003477 90129b06b320fa203df4392688712ed0 297 PIRSF PIRSF004976 2 282 6.8E-70 T 13-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 VEA_003477 90129b06b320fa203df4392688712ed0 297 Pfam PF01171 PP-loop family 41 203 4.9E-16 T 13-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 VEA_003477 90129b06b320fa203df4392688712ed0 297 SUPERFAMILY SSF52402 15 233 6.75E-54 T 13-10-2018 VEA_003477 90129b06b320fa203df4392688712ed0 297 Gene3D G3DSA:3.40.50.620 2 264 8.4E-49 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_003477 90129b06b320fa203df4392688712ed0 297 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 8 269 56.382 T 13-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 VEA_001392 7ac7d59ec77716a376239f3c4b907636 283 Gene3D G3DSA:3.40.710.10 20 281 4.1E-68 T 13-10-2018 VEA_001392 7ac7d59ec77716a376239f3c4b907636 283 PRINTS PR00118 Beta-lactamase class A signature 98 123 1.2E-57 T 13-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 VEA_001392 7ac7d59ec77716a376239f3c4b907636 283 PRINTS PR00118 Beta-lactamase class A signature 160 185 1.2E-57 T 13-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 VEA_001392 7ac7d59ec77716a376239f3c4b907636 283 PRINTS PR00118 Beta-lactamase class A signature 196 211 1.2E-57 T 13-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 VEA_001392 7ac7d59ec77716a376239f3c4b907636 283 PRINTS PR00118 Beta-lactamase class A signature 134 158 1.2E-57 T 13-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 VEA_001392 7ac7d59ec77716a376239f3c4b907636 283 PRINTS PR00118 Beta-lactamase class A signature 56 73 1.2E-57 T 13-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 VEA_001392 7ac7d59ec77716a376239f3c4b907636 283 PRINTS PR00118 Beta-lactamase class A signature 25 49 1.2E-57 T 13-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 VEA_001392 7ac7d59ec77716a376239f3c4b907636 283 PRINTS PR00118 Beta-lactamase class A signature 213 228 1.2E-57 T 13-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 VEA_001392 7ac7d59ec77716a376239f3c4b907636 283 SUPERFAMILY SSF56601 20 280 4.75E-72 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VEA_001392 7ac7d59ec77716a376239f3c4b907636 283 Pfam PF13354 Beta-lactamase enzyme family 45 252 2.8E-37 T 13-10-2018 VEA_001392 7ac7d59ec77716a376239f3c4b907636 283 ProSitePatterns PS00146 Beta-lactamase class-A active site. 58 73 - T 13-10-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 VEA_002803 169bf5e6b207026af16613f76e623cbe 300 SUPERFAMILY SSF54909 1 297 3.58E-92 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel VEA_002803 169bf5e6b207026af16613f76e623cbe 300 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 293 7.0E-81 T 13-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 VEA_002803 169bf5e6b207026af16613f76e623cbe 300 Pfam PF04261 Dyp-type peroxidase family 5 293 1.4E-86 T 13-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 VEA_004343 c160f22e953dc972982adceabdbe3b6b 74 Pfam PF07191 zinc-ribbons 5 68 1.5E-26 T 13-10-2018 IPR010807 Protein of unknown function DUF1407 VEA_004343 c160f22e953dc972982adceabdbe3b6b 74 SUPERFAMILY SSF161187 3 70 3.66E-26 T 13-10-2018 VEA_004343 c160f22e953dc972982adceabdbe3b6b 74 Gene3D G3DSA:2.10.290.10 2 71 3.8E-26 T 13-10-2018 IPR029037 YfgJ-like VEA_004343 c160f22e953dc972982adceabdbe3b6b 74 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 6 68 6.0E-28 T 13-10-2018 IPR010807 Protein of unknown function DUF1407 VEA_003548 dc5a89b6191d099df98f540054780a63 1328 Pfam PF04408 Helicase associated domain (HA2) 496 587 4.3E-18 T 13-10-2018 IPR007502 Helicase-associated domain GO:0004386 VEA_003548 dc5a89b6191d099df98f540054780a63 1328 SUPERFAMILY SSF52540 105 631 1.37E-116 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003548 dc5a89b6191d099df98f540054780a63 1328 Pfam PF00270 DEAD/DEAH box helicase 118 264 2.1E-8 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VEA_003548 dc5a89b6191d099df98f540054780a63 1328 Gene3D G3DSA:1.20.120.1080 478 578 3.0E-18 T 13-10-2018 VEA_003548 dc5a89b6191d099df98f540054780a63 1328 Gene3D G3DSA:3.40.50.300 284 451 1.9E-55 T 13-10-2018 VEA_003548 dc5a89b6191d099df98f540054780a63 1328 SMART SM00487 106 290 9.2E-32 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEA_003548 dc5a89b6191d099df98f540054780a63 1328 SMART SM00382 123 414 7.3E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_003548 dc5a89b6191d099df98f540054780a63 1328 SMART SM00847 494 589 3.2E-36 T 13-10-2018 IPR007502 Helicase-associated domain GO:0004386 VEA_003548 dc5a89b6191d099df98f540054780a63 1328 Pfam PF11898 Domain of unknown function (DUF3418) 742 1326 1.0E-232 T 13-10-2018 IPR024590 RNA helicase HrpA, C-terminal VEA_003548 dc5a89b6191d099df98f540054780a63 1328 SMART SM00490 334 434 6.3E-15 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_003548 dc5a89b6191d099df98f540054780a63 1328 Gene3D G3DSA:3.40.50.300 59 283 2.6E-79 T 13-10-2018 VEA_003548 dc5a89b6191d099df98f540054780a63 1328 Pfam PF00271 Helicase conserved C-terminal domain 319 433 1.8E-11 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_003548 dc5a89b6191d099df98f540054780a63 1328 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 652 728 6.8E-23 T 13-10-2018 IPR011709 Domain of unknown function DUF1605 VEA_003548 dc5a89b6191d099df98f540054780a63 1328 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 45 1326 0.0 T 13-10-2018 IPR010222 RNA helicase HrpA GO:0004004 VEA_003366 a1484c63dc740f57925d3015608cbf34 440 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 27 92 2.1E-9 T 13-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEA_003366 a1484c63dc740f57925d3015608cbf34 440 SUPERFAMILY SSF52540 95 364 1.0E-95 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003366 a1484c63dc740f57925d3015608cbf34 440 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 14 436 5.9E-173 T 13-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEA_003366 a1484c63dc740f57925d3015608cbf34 440 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 358 4.5E-78 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEA_003366 a1484c63dc740f57925d3015608cbf34 440 Gene3D G3DSA:3.40.50.12240 16 439 5.4E-150 T 13-10-2018 VEA_003366 a1484c63dc740f57925d3015608cbf34 440 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 349 358 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEA_003366 a1484c63dc740f57925d3015608cbf34 440 SMART SM00382 161 342 6.1E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_003366 a1484c63dc740f57925d3015608cbf34 440 TIGRFAM TIGR02546 III_secr_ATP: type III secretion apparatus H+-transporting two-sector ATPase 21 437 5.9E-199 T 13-10-2018 IPR013380 ATPase, type III secretion system, H+-transporting GO:0005524|GO:0005737|GO:0006754|GO:0030254|GO:0030257|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEA_003975 7277affae3476a4c5d9aeeca45849f0f 515 Pfam PF11840 Protein of unknown function (DUF3360) 11 515 6.5E-264 T 13-10-2018 IPR021794 Protein of unknown function DUF3360 VEA_001817 0814604592fd33e3ab9341353790652a 269 Gene3D G3DSA:3.20.190.10 2 128 1.2E-41 T 13-10-2018 IPR035937 MutM-like, N-terminal VEA_001817 0814604592fd33e3ab9341353790652a 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 43.255 T 13-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 VEA_001817 0814604592fd33e3ab9341353790652a 269 SUPERFAMILY SSF46946 130 221 2.36E-29 T 13-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 VEA_001817 0814604592fd33e3ab9341353790652a 269 SMART SM01232 129 221 7.1E-44 T 13-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 VEA_001817 0814604592fd33e3ab9341353790652a 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 269 1.6E-8 T 13-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 VEA_001817 0814604592fd33e3ab9341353790652a 269 Gene3D G3DSA:1.10.8.50 131 269 7.3E-47 T 13-10-2018 VEA_001817 0814604592fd33e3ab9341353790652a 269 SMART SM00898 2 115 2.8E-52 T 13-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 VEA_001817 0814604592fd33e3ab9341353790652a 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 2.2E-93 T 13-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 VEA_001817 0814604592fd33e3ab9341353790652a 269 SUPERFAMILY SSF81624 2 138 2.88E-40 T 13-10-2018 IPR035937 MutM-like, N-terminal VEA_001817 0814604592fd33e3ab9341353790652a 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 2.0E-26 T 13-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 VEA_001817 0814604592fd33e3ab9341353790652a 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 13-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 VEA_001817 0814604592fd33e3ab9341353790652a 269 SUPERFAMILY SSF57716 217 269 1.83E-16 T 13-10-2018 VEA_001817 0814604592fd33e3ab9341353790652a 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 1.7E-31 T 13-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 VEA_000729 5082f04e786b343c851b330642e9297d 346 SUPERFAMILY SSF64518 61 299 9.15E-5 T 13-10-2018 VEA_000128 4c1fa2af013977e4dcfd2c29f74672b7 484 Gene3D G3DSA:1.10.287.130 283 340 1.0E-17 T 13-10-2018 VEA_000128 4c1fa2af013977e4dcfd2c29f74672b7 484 SMART SM00387 381 479 7.4E-12 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_000128 4c1fa2af013977e4dcfd2c29f74672b7 484 SMART SM00388 276 343 5.0E-5 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_000128 4c1fa2af013977e4dcfd2c29f74672b7 484 SUPERFAMILY SSF47384 271 340 8.83E-7 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEA_000128 4c1fa2af013977e4dcfd2c29f74672b7 484 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 386 477 1.2E-8 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_000128 4c1fa2af013977e4dcfd2c29f74672b7 484 Pfam PF00512 His Kinase A (phospho-acceptor) domain 281 332 2.6E-6 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_000128 4c1fa2af013977e4dcfd2c29f74672b7 484 Pfam PF11884 Domain of unknown function (DUF3404) 17 275 1.2E-110 T 13-10-2018 IPR021821 Protein of unknown function DUF3404 VEA_000128 4c1fa2af013977e4dcfd2c29f74672b7 484 SUPERFAMILY SSF55874 348 479 2.6E-17 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_000128 4c1fa2af013977e4dcfd2c29f74672b7 484 Gene3D G3DSA:3.30.565.10 341 476 1.0E-17 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_004437 92f3db35eb4cf115dbe845e14afa9e51 505 Gene3D G3DSA:2.40.50.140 5 151 2.3E-29 T 13-10-2018 VEA_004437 92f3db35eb4cf115dbe845e14afa9e51 505 Gene3D G3DSA:3.30.930.10 152 505 2.0E-131 T 13-10-2018 VEA_004437 92f3db35eb4cf115dbe845e14afa9e51 505 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 19 504 43.301 T 13-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VEA_004437 92f3db35eb4cf115dbe845e14afa9e51 505 Pfam PF00152 tRNA synthetases class II (D, K and N) 156 501 3.1E-81 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEA_004437 92f3db35eb4cf115dbe845e14afa9e51 505 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 14 504 1.0E-201 T 13-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VEA_004437 92f3db35eb4cf115dbe845e14afa9e51 505 SUPERFAMILY SSF55681 156 502 5.94E-119 T 13-10-2018 VEA_004437 92f3db35eb4cf115dbe845e14afa9e51 505 Pfam PF01336 OB-fold nucleic acid binding domain 68 140 9.0E-8 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VEA_004437 92f3db35eb4cf115dbe845e14afa9e51 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 193 203 7.8E-38 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VEA_004437 92f3db35eb4cf115dbe845e14afa9e51 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 386 402 7.8E-38 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VEA_004437 92f3db35eb4cf115dbe845e14afa9e51 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 256 273 7.8E-38 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VEA_004437 92f3db35eb4cf115dbe845e14afa9e51 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 209 225 7.8E-38 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VEA_004437 92f3db35eb4cf115dbe845e14afa9e51 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 238 251 7.8E-38 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VEA_004437 92f3db35eb4cf115dbe845e14afa9e51 505 SUPERFAMILY SSF50249 12 149 2.25E-33 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_000637 30bdd56a38cf6ba7c4cc95e268536842 468 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 257 294 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEA_000637 30bdd56a38cf6ba7c4cc95e268536842 468 SUPERFAMILY SSF53383 5 455 4.65E-112 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_000637 30bdd56a38cf6ba7c4cc95e268536842 468 Pfam PF00202 Aminotransferase class-III 35 452 2.6E-80 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEA_000637 30bdd56a38cf6ba7c4cc95e268536842 468 Gene3D G3DSA:3.40.640.10 68 347 2.2E-156 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_000637 30bdd56a38cf6ba7c4cc95e268536842 468 Gene3D G3DSA:3.90.1150.10 12 452 2.2E-156 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEA_000637 30bdd56a38cf6ba7c4cc95e268536842 468 PIRSF PIRSF000521 35 455 1.1E-33 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEA_001632 05674b614ddf42f50a711fc23c59ed54 650 Gene3D G3DSA:3.40.930.10 502 647 3.9E-51 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VEA_001632 05674b614ddf42f50a711fc23c59ed54 650 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 9 345 5.7E-170 T 13-10-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197 VEA_001632 05674b614ddf42f50a711fc23c59ed54 650 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 507 644 1.0E-33 T 13-10-2018 IPR002178 PTS EIIA type-2 domain VEA_001632 05674b614ddf42f50a711fc23c59ed54 650 Pfam PF02378 Phosphotransferase system, EIIC 18 278 6.5E-19 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VEA_001632 05674b614ddf42f50a711fc23c59ed54 650 Gene3D G3DSA:3.40.50.2300 372 476 2.9E-36 T 13-10-2018 VEA_001632 05674b614ddf42f50a711fc23c59ed54 650 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 386 467 6.8E-12 T 13-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VEA_001632 05674b614ddf42f50a711fc23c59ed54 650 SUPERFAMILY SSF55804 506 645 2.22E-40 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VEA_001632 05674b614ddf42f50a711fc23c59ed54 650 SUPERFAMILY SSF52794 385 472 2.75E-25 T 13-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VEA_001632 05674b614ddf42f50a711fc23c59ed54 650 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 550 566 - T 13-10-2018 IPR002178 PTS EIIA type-2 domain VEA_002056 87f2ca1df74d2cebc54dd245fea0560a 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 310 3.5E-109 T 13-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 VEA_002056 87f2ca1df74d2cebc54dd245fea0560a 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 303 2.9E-29 T 13-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VEA_002056 87f2ca1df74d2cebc54dd245fea0560a 315 Pfam PF00551 Formyl transferase 6 182 1.7E-47 T 13-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VEA_002056 87f2ca1df74d2cebc54dd245fea0560a 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 13-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VEA_002056 87f2ca1df74d2cebc54dd245fea0560a 315 Gene3D G3DSA:3.40.50.170 1 209 5.8E-88 T 13-10-2018 VEA_002056 87f2ca1df74d2cebc54dd245fea0560a 315 SUPERFAMILY SSF50486 208 310 4.32E-33 T 13-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 VEA_002056 87f2ca1df74d2cebc54dd245fea0560a 315 SUPERFAMILY SSF53328 5 210 2.35E-67 T 13-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VEA_002056 87f2ca1df74d2cebc54dd245fea0560a 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 306 36.92 T 13-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 VEA_002056 87f2ca1df74d2cebc54dd245fea0560a 315 Gene3D G3DSA:3.10.25.10 210 314 3.2E-37 T 13-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VEA_000055 ae4fa8793e78e7c03cab4ea12912137c 543 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 355 505 2.5E-41 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_000055 ae4fa8793e78e7c03cab4ea12912137c 543 SMART SM00304 211 265 1.2E-5 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_000055 ae4fa8793e78e7c03cab4ea12912137c 543 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 169 1.3E-19 T 13-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VEA_000055 ae4fa8793e78e7c03cab4ea12912137c 543 Gene3D G3DSA:1.10.287.950 211 543 2.5E-76 T 13-10-2018 VEA_000055 ae4fa8793e78e7c03cab4ea12912137c 543 SMART SM00283 273 541 4.6E-71 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_000055 ae4fa8793e78e7c03cab4ea12912137c 543 SUPERFAMILY SSF58104 239 542 1.12E-73 T 13-10-2018 VEA_000091 ad0abc770f7ea450ef1d134bf6be129c 202 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 196 4.9E-18 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_000091 ad0abc770f7ea450ef1d134bf6be129c 202 SUPERFAMILY SSF52172 1 124 1.07E-26 T 13-10-2018 IPR011006 CheY-like superfamily VEA_000091 ad0abc770f7ea450ef1d134bf6be129c 202 ProSitePatterns PS00622 LuxR-type HTH domain signature. 157 184 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_000091 ad0abc770f7ea450ef1d134bf6be129c 202 SUPERFAMILY SSF46894 125 198 4.08E-18 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEA_000091 ad0abc770f7ea450ef1d134bf6be129c 202 Gene3D G3DSA:3.40.50.12740 2 202 2.9E-51 T 13-10-2018 VEA_000091 ad0abc770f7ea450ef1d134bf6be129c 202 Pfam PF00072 Response regulator receiver domain 4 113 1.5E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_000091 ad0abc770f7ea450ef1d134bf6be129c 202 SMART SM00448 2 112 1.7E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_000091 ad0abc770f7ea450ef1d134bf6be129c 202 SMART SM00421 140 197 6.9E-19 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_000091 ad0abc770f7ea450ef1d134bf6be129c 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 2.8E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_000091 ad0abc770f7ea450ef1d134bf6be129c 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 2.8E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_000091 ad0abc770f7ea450ef1d134bf6be129c 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 2.8E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_002036 2adf756eb9e79012463cfe3d19d9c724 300 Pfam PF03466 LysR substrate binding domain 88 287 1.6E-20 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_002036 2adf756eb9e79012463cfe3d19d9c724 300 Gene3D G3DSA:3.40.190.290 93 278 8.8E-12 T 13-10-2018 VEA_002036 2adf756eb9e79012463cfe3d19d9c724 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 8.0E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_002036 2adf756eb9e79012463cfe3d19d9c724 300 Gene3D G3DSA:1.10.10.10 1 90 2.4E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_002036 2adf756eb9e79012463cfe3d19d9c724 300 SUPERFAMILY SSF53850 89 291 5.91E-24 T 13-10-2018 VEA_002036 2adf756eb9e79012463cfe3d19d9c724 300 SUPERFAMILY SSF46785 6 87 3.05E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_003495 d9fe8b9e12a44618f923983b0b7bc1be 66 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 9 37 3.8E-4 T 13-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VEA_003495 d9fe8b9e12a44618f923983b0b7bc1be 66 PIRSF PIRSF036704 1 66 2.9E-34 T 13-10-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing VEA_003495 d9fe8b9e12a44618f923983b0b7bc1be 66 TIGRFAM TIGR02811 formate_TAT: formate dehydrogenase region TAT target 1 66 6.4E-33 T 13-10-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing VEA_003578 4aa7b0be03ee9d0c7c333295fae07e9d 315 SUPERFAMILY SSF46785 9 91 6.19E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_003578 4aa7b0be03ee9d0c7c333295fae07e9d 315 Gene3D G3DSA:3.40.190.10 95 302 2.1E-38 T 13-10-2018 VEA_003578 4aa7b0be03ee9d0c7c333295fae07e9d 315 Pfam PF03466 LysR substrate binding domain 101 307 9.8E-17 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_003578 4aa7b0be03ee9d0c7c333295fae07e9d 315 Gene3D G3DSA:1.10.10.10 5 92 5.4E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_003578 4aa7b0be03ee9d0c7c333295fae07e9d 315 Gene3D G3DSA:3.40.190.10 180 278 2.1E-38 T 13-10-2018 VEA_003578 4aa7b0be03ee9d0c7c333295fae07e9d 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 72 2.8E-13 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_003578 4aa7b0be03ee9d0c7c333295fae07e9d 315 SUPERFAMILY SSF53850 95 305 5.25E-31 T 13-10-2018 VEA_002755 e52ecfe60390c137af5b21cc1c094990 169 Gene3D G3DSA:3.30.910.20 25 169 1.4E-34 T 13-10-2018 IPR024930 Skp domain superfamily VEA_002755 e52ecfe60390c137af5b21cc1c094990 169 Pfam PF03938 Outer membrane protein (OmpH-like) 13 168 7.4E-27 T 13-10-2018 IPR005632 Chaperone protein Skp GO:0051082 VEA_002755 e52ecfe60390c137af5b21cc1c094990 169 SUPERFAMILY SSF111384 26 169 1.57E-31 T 13-10-2018 VEA_002755 e52ecfe60390c137af5b21cc1c094990 169 SMART SM00935 15 169 9.3E-43 T 13-10-2018 IPR005632 Chaperone protein Skp GO:0051082 VEA_002755 e52ecfe60390c137af5b21cc1c094990 169 PIRSF PIRSF002094 1 169 3.1E-41 T 13-10-2018 IPR005632 Chaperone protein Skp GO:0051082 VEA_003529 8c46eb26005888fd292a1efbdb8ecf69 272 Pfam PF00691 OmpA family 151 245 1.8E-20 T 13-10-2018 IPR006665 OmpA-like domain VEA_003529 8c46eb26005888fd292a1efbdb8ecf69 272 SUPERFAMILY SSF103088 140 251 3.79E-30 T 13-10-2018 IPR036737 OmpA-like domain superfamily VEA_003529 8c46eb26005888fd292a1efbdb8ecf69 272 PRINTS PR01021 OMPA domain signature 181 196 1.6E-9 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEA_003529 8c46eb26005888fd292a1efbdb8ecf69 272 PRINTS PR01021 OMPA domain signature 196 212 1.6E-9 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEA_003529 8c46eb26005888fd292a1efbdb8ecf69 272 PRINTS PR01021 OMPA domain signature 151 173 1.6E-9 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEA_003529 8c46eb26005888fd292a1efbdb8ecf69 272 Gene3D G3DSA:3.30.1330.60 127 260 3.3E-29 T 13-10-2018 IPR036737 OmpA-like domain superfamily VEA_004418 11bb2bff6b3ba4037639df08f4a47aae 169 Pfam PF01252 Signal peptidase (SPase) II 19 161 5.2E-38 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VEA_004418 11bb2bff6b3ba4037639df08f4a47aae 169 ProSitePatterns PS00855 Signal peptidases II signature. 109 121 - T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VEA_004418 11bb2bff6b3ba4037639df08f4a47aae 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 106 121 8.8E-18 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VEA_004418 11bb2bff6b3ba4037639df08f4a47aae 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 58 66 8.8E-18 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VEA_004418 11bb2bff6b3ba4037639df08f4a47aae 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 142 158 8.8E-18 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VEA_004418 11bb2bff6b3ba4037639df08f4a47aae 169 TIGRFAM TIGR00077 lspA: signal peptidase II 10 165 1.4E-48 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VEA_004418 11bb2bff6b3ba4037639df08f4a47aae 169 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 10 167 16.59 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VEA_003931 7911ad1f794de63a6615a002efe7a1b6 501 Pfam PF14400 Inactive transglutaminase fused to 7 transmembrane helices 24 183 7.6E-58 T 13-10-2018 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices VEA_003931 7911ad1f794de63a6615a002efe7a1b6 501 Pfam PF14402 7 transmembrane helices usually fused to an inactive transglutaminase 255 498 6.3E-109 T 13-10-2018 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase VEA_000605 5c473b8fcdafbdaf33e930954e6457ba 308 SUPERFAMILY SSF53807 29 286 1.02E-50 T 13-10-2018 VEA_000605 5c473b8fcdafbdaf33e930954e6457ba 308 Gene3D G3DSA:3.40.50.1980 45 193 1.8E-19 T 13-10-2018 VEA_000605 5c473b8fcdafbdaf33e930954e6457ba 308 Gene3D G3DSA:3.40.50.1980 195 304 4.5E-6 T 13-10-2018 VEA_000605 5c473b8fcdafbdaf33e930954e6457ba 308 Pfam PF01297 Zinc-uptake complex component A periplasmic 49 301 5.3E-23 T 13-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 VEA_001703 37328ff5846faea29ea55ca1997d7afb 301 Pfam PF10987 Protein of unknown function (DUF2806) 61 279 1.2E-84 T 13-10-2018 IPR021254 Protein of unknown function DUF2806 VEA_001703 37328ff5846faea29ea55ca1997d7afb 301 TIGRFAM TIGR03899 TIGR03899: TIGR03899 family protein 40 289 3.4E-106 T 13-10-2018 IPR021254 Protein of unknown function DUF2806 VEA_003570 e2351f2949b7058068ba3187b432edac 254 SMART SM00382 26 214 2.0E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_003570 e2351f2949b7058068ba3187b432edac 254 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_003570 e2351f2949b7058068ba3187b432edac 254 Pfam PF00005 ABC transporter 17 165 3.3E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_003570 e2351f2949b7058068ba3187b432edac 254 Gene3D G3DSA:3.40.50.300 1 249 1.2E-61 T 13-10-2018 VEA_003570 e2351f2949b7058068ba3187b432edac 254 SUPERFAMILY SSF52540 2 233 3.52E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000849 640ca8da1aa852d2fa370be032079a21 699 Gene3D G3DSA:2.170.130.10 35 160 3.1E-30 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VEA_000849 640ca8da1aa852d2fa370be032079a21 699 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 150 1.5E-16 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain VEA_000849 640ca8da1aa852d2fa370be032079a21 699 SUPERFAMILY SSF56935 19 699 5.84E-118 T 13-10-2018 VEA_000849 640ca8da1aa852d2fa370be032079a21 699 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 55 698 4.2E-92 T 13-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 VEA_000849 640ca8da1aa852d2fa370be032079a21 699 Gene3D G3DSA:2.40.170.20 161 699 9.6E-104 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VEA_000849 640ca8da1aa852d2fa370be032079a21 699 Pfam PF00593 TonB dependent receptor 238 698 2.2E-50 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VEA_000108 8aa5ae14cf49fb7d29bd89cff1c64d57 156 PIRSF PIRSF000368 1 156 1.8E-60 T 13-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 VEA_000108 8aa5ae14cf49fb7d29bd89cff1c64d57 156 Pfam PF13353 4Fe-4S single cluster domain 12 151 1.3E-52 T 13-10-2018 VEA_000108 8aa5ae14cf49fb7d29bd89cff1c64d57 156 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 13-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 VEA_000108 8aa5ae14cf49fb7d29bd89cff1c64d57 156 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 152 2.7E-62 T 13-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 VEA_000108 8aa5ae14cf49fb7d29bd89cff1c64d57 156 SUPERFAMILY SSF102114 23 117 3.79E-8 T 13-10-2018 VEA_000108 8aa5ae14cf49fb7d29bd89cff1c64d57 156 Gene3D G3DSA:3.20.20.70 2 156 4.1E-23 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_003147 3f238c419895cd519c361ffd4f93c20a 468 Pfam PF00155 Aminotransferase class I and II 146 460 4.9E-38 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VEA_003147 3f238c419895cd519c361ffd4f93c20a 468 Gene3D G3DSA:3.90.1150.10 97 464 9.2E-106 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEA_003147 3f238c419895cd519c361ffd4f93c20a 468 SMART SM00345 7 66 3.0E-12 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_003147 3f238c419895cd519c361ffd4f93c20a 468 Gene3D G3DSA:1.10.10.10 1 68 1.5E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_003147 3f238c419895cd519c361ffd4f93c20a 468 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 9.3E-11 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_003147 3f238c419895cd519c361ffd4f93c20a 468 Gene3D G3DSA:3.40.640.10 140 359 9.2E-106 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_003147 3f238c419895cd519c361ffd4f93c20a 468 SUPERFAMILY SSF46785 1 68 1.68E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_003147 3f238c419895cd519c361ffd4f93c20a 468 SUPERFAMILY SSF53383 94 467 5.44E-101 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_002001 fc98044b551e57777ec340a44287a583 694 Gene3D G3DSA:3.20.20.80 436 664 1.3E-37 T 13-10-2018 VEA_002001 fc98044b551e57777ec340a44287a583 694 SUPERFAMILY SSF51445 189 665 3.74E-78 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VEA_002001 fc98044b551e57777ec340a44287a583 694 Pfam PF00128 Alpha amylase, catalytic domain 236 614 1.5E-37 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VEA_002001 fc98044b551e57777ec340a44287a583 694 PIRSF PIRSF036917 1 694 0.0 T 13-10-2018 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 VEA_002001 fc98044b551e57777ec340a44287a583 694 SMART SM00642 203 656 4.5E-78 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VEA_002001 fc98044b551e57777ec340a44287a583 694 Gene3D G3DSA:3.20.20.80 193 406 1.9E-46 T 13-10-2018 VEA_004329 36c3b8fdd2a5b3b2e1f1ba498918d844 567 SUPERFAMILY SSF51055 430 479 1.7E-16 T 13-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VEA_004329 36c3b8fdd2a5b3b2e1f1ba498918d844 567 Gene3D G3DSA:3.30.20.10 178 248 1.5E-76 T 13-10-2018 VEA_004329 36c3b8fdd2a5b3b2e1f1ba498918d844 567 Gene3D G3DSA:2.10.10.20 434 480 3.1E-15 T 13-10-2018 VEA_004329 36c3b8fdd2a5b3b2e1f1ba498918d844 567 Gene3D G3DSA:1.10.530.10 105 346 1.5E-76 T 13-10-2018 VEA_004329 36c3b8fdd2a5b3b2e1f1ba498918d844 567 SMART SM00495 436 478 9.6E-18 T 13-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VEA_004329 36c3b8fdd2a5b3b2e1f1ba498918d844 567 SMART SM00495 519 564 1.5 T 13-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VEA_004329 36c3b8fdd2a5b3b2e1f1ba498918d844 567 SUPERFAMILY SSF53955 87 350 2.47E-53 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily VEA_004329 36c3b8fdd2a5b3b2e1f1ba498918d844 567 Pfam PF00182 Chitinase class I 106 325 5.5E-30 T 13-10-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VEA_001597 92413e867b5bbe464e0560289a03d876 592 Pfam PF00082 Subtilase family 65 384 1.2E-30 T 13-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 VEA_001597 92413e867b5bbe464e0560289a03d876 592 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 112 122 - T 13-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site VEA_001597 92413e867b5bbe464e0560289a03d876 592 Pfam PF01483 Proprotein convertase P-domain 475 555 5.4E-20 T 13-10-2018 IPR002884 P domain GO:0004252|GO:0006508 VEA_001597 92413e867b5bbe464e0560289a03d876 592 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 339 349 - T 13-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site VEA_001597 92413e867b5bbe464e0560289a03d876 592 Gene3D G3DSA:3.40.50.200 19 434 7.7E-98 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 VEA_001597 92413e867b5bbe464e0560289a03d876 592 Gene3D G3DSA:2.60.120.260 438 592 1.1E-51 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily VEA_001597 92413e867b5bbe464e0560289a03d876 592 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 70 81 - T 13-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site VEA_001597 92413e867b5bbe464e0560289a03d876 592 PRINTS PR00723 Subtilisin serine protease family (S8) signature 65 84 3.6E-17 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related VEA_001597 92413e867b5bbe464e0560289a03d876 592 PRINTS PR00723 Subtilisin serine protease family (S8) signature 108 121 3.6E-17 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related VEA_001597 92413e867b5bbe464e0560289a03d876 592 PRINTS PR00723 Subtilisin serine protease family (S8) signature 338 354 3.6E-17 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related VEA_001597 92413e867b5bbe464e0560289a03d876 592 SUPERFAMILY SSF52743 23 432 3.53E-58 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 VEA_001597 92413e867b5bbe464e0560289a03d876 592 SUPERFAMILY SSF49785 438 592 1.57E-24 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily VEA_000406 506ae8dfa7a6185cb3199aeb771c8447 540 Gene3D G3DSA:3.50.50.60 2 377 5.3E-189 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_000406 506ae8dfa7a6185cb3199aeb771c8447 540 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 3.5E-6 T 13-10-2018 VEA_000406 506ae8dfa7a6185cb3199aeb771c8447 540 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 174 189 3.5E-6 T 13-10-2018 VEA_000406 506ae8dfa7a6185cb3199aeb771c8447 540 Gene3D G3DSA:3.30.70.20 442 535 9.8E-38 T 13-10-2018 VEA_000406 506ae8dfa7a6185cb3199aeb771c8447 540 Gene3D G3DSA:3.30.9.90 74 441 5.3E-189 T 13-10-2018 VEA_000406 506ae8dfa7a6185cb3199aeb771c8447 540 SUPERFAMILY SSF51905 1 439 1.44E-53 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_000406 506ae8dfa7a6185cb3199aeb771c8447 540 SUPERFAMILY SSF54862 441 540 5.73E-28 T 13-10-2018 VEA_000406 506ae8dfa7a6185cb3199aeb771c8447 540 SUPERFAMILY SSF54373 206 301 5.1E-36 T 13-10-2018 VEA_000406 506ae8dfa7a6185cb3199aeb771c8447 540 Pfam PF13450 NAD(P)-binding Rossmann-like domain 7 52 4.2E-7 T 13-10-2018 VEA_000406 506ae8dfa7a6185cb3199aeb771c8447 540 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 437 537 1.0E-48 T 13-10-2018 VEA_002477 d08af1d3717c13f5c0a442b96711d76f 298 Pfam PF03466 LysR substrate binding domain 94 271 1.8E-16 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_002477 d08af1d3717c13f5c0a442b96711d76f 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 3.3E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_002477 d08af1d3717c13f5c0a442b96711d76f 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 3.3E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_002477 d08af1d3717c13f5c0a442b96711d76f 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 3.3E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_002477 d08af1d3717c13f5c0a442b96711d76f 298 Gene3D G3DSA:1.10.10.10 2 85 2.2E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_002477 d08af1d3717c13f5c0a442b96711d76f 298 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 298 53.333 T 13-10-2018 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria VEA_002477 d08af1d3717c13f5c0a442b96711d76f 298 SUPERFAMILY SSF53850 94 295 1.61E-22 T 13-10-2018 VEA_002477 d08af1d3717c13f5c0a442b96711d76f 298 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 4 296 1.3E-106 T 13-10-2018 IPR017685 HTH-type transcriptional regulator ArgP VEA_002477 d08af1d3717c13f5c0a442b96711d76f 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 1.7E-15 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_002477 d08af1d3717c13f5c0a442b96711d76f 298 SUPERFAMILY SSF46785 4 112 2.51E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_002477 d08af1d3717c13f5c0a442b96711d76f 298 Gene3D G3DSA:3.40.190.290 88 295 1.0E-64 T 13-10-2018 VEA_003985 ae6e4e322ed012f1ce0b5b86ef35966e 59 SUPERFAMILY SSF158997 1 54 8.89E-21 T 13-10-2018 VEA_003985 ae6e4e322ed012f1ce0b5b86ef35966e 59 Pfam PF03966 Trm112p-like protein 2 41 2.1E-11 T 13-10-2018 IPR005651 Trm112-like VEA_003985 ae6e4e322ed012f1ce0b5b86ef35966e 59 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 27.853 T 13-10-2018 IPR038053 Uncharacterised protein family UPF0434 VEA_003985 ae6e4e322ed012f1ce0b5b86ef35966e 59 Gene3D G3DSA:2.20.25.10 8 59 3.2E-24 T 13-10-2018 VEA_000793 861b1d5acbe607fe99c1dfa7db4f31fc 380 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 41 192 8.8E-52 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VEA_000793 861b1d5acbe607fe99c1dfa7db4f31fc 380 Gene3D G3DSA:3.30.1060.10 21 199 3.5E-63 T 13-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VEA_000793 861b1d5acbe607fe99c1dfa7db4f31fc 380 Pfam PF01625 Peptide methionine sulfoxide reductase 43 193 2.7E-57 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VEA_000793 861b1d5acbe607fe99c1dfa7db4f31fc 380 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 239 371 8.4E-59 T 13-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VEA_000793 861b1d5acbe607fe99c1dfa7db4f31fc 380 Pfam PF01641 SelR domain 243 362 1.7E-46 T 13-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VEA_000793 861b1d5acbe607fe99c1dfa7db4f31fc 380 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 40 199 36.033 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VEA_000793 861b1d5acbe607fe99c1dfa7db4f31fc 380 SUPERFAMILY SSF55068 32 205 1.44E-71 T 13-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VEA_000793 861b1d5acbe607fe99c1dfa7db4f31fc 380 Gene3D G3DSA:2.170.150.20 233 380 6.6E-57 T 13-10-2018 VEA_000793 861b1d5acbe607fe99c1dfa7db4f31fc 380 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 237 363 35.326 T 13-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VEA_000793 861b1d5acbe607fe99c1dfa7db4f31fc 380 SUPERFAMILY SSF51316 240 379 4.29E-59 T 13-10-2018 IPR011057 Mss4-like superfamily VEA_003706 d15f2739bb2236d42ac972bc7da1c78a 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 3.5E-106 T 13-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 VEA_003706 d15f2739bb2236d42ac972bc7da1c78a 327 SUPERFAMILY SSF55681 92 327 1.73E-82 T 13-10-2018 VEA_003706 d15f2739bb2236d42ac972bc7da1c78a 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 2.1E-25 T 13-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 VEA_003706 d15f2739bb2236d42ac972bc7da1c78a 327 SUPERFAMILY SSF46589 14 99 1.62E-22 T 13-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 VEA_003706 d15f2739bb2236d42ac972bc7da1c78a 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 48.925 T 13-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 VEA_003706 d15f2739bb2236d42ac972bc7da1c78a 327 Gene3D G3DSA:3.30.930.10 8 327 2.2E-126 T 13-10-2018 VEA_003706 d15f2739bb2236d42ac972bc7da1c78a 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 327 2.8E-111 T 13-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 VEA_000443 61464d45000239c2323df15dd305db2e 666 SUPERFAMILY SSF56112 43 290 1.75E-37 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily VEA_000443 61464d45000239c2323df15dd305db2e 666 Gene3D G3DSA:1.10.510.10 29 305 1.3E-34 T 13-10-2018 VEA_000443 61464d45000239c2323df15dd305db2e 666 Pfam PF00069 Protein kinase domain 61 288 4.3E-29 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VEA_000443 61464d45000239c2323df15dd305db2e 666 SMART SM00220 46 305 2.5E-12 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VEA_000443 61464d45000239c2323df15dd305db2e 666 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 167 179 - T 13-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 VEA_001456 a2530fadf3a4ee6bca348675d7d57450 224 SUPERFAMILY SSF103088 108 220 2.09E-30 T 13-10-2018 IPR036737 OmpA-like domain superfamily VEA_001456 a2530fadf3a4ee6bca348675d7d57450 224 Pfam PF00691 OmpA family 120 214 9.9E-18 T 13-10-2018 IPR006665 OmpA-like domain VEA_001456 a2530fadf3a4ee6bca348675d7d57450 224 PRINTS PR01021 OMPA domain signature 120 142 4.9E-8 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEA_001456 a2530fadf3a4ee6bca348675d7d57450 224 PRINTS PR01021 OMPA domain signature 150 165 4.9E-8 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEA_001456 a2530fadf3a4ee6bca348675d7d57450 224 PRINTS PR01021 OMPA domain signature 165 181 4.9E-8 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEA_001456 a2530fadf3a4ee6bca348675d7d57450 224 Gene3D G3DSA:3.30.1330.60 82 223 4.0E-31 T 13-10-2018 IPR036737 OmpA-like domain superfamily VEA_000934 2bef10b7631ab181f18cfad439600196 267 Gene3D G3DSA:3.40.50.1000 9 260 1.3E-78 T 13-10-2018 IPR023214 HAD superfamily VEA_000934 2bef10b7631ab181f18cfad439600196 267 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 9 233 1.4E-23 T 13-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 VEA_000934 2bef10b7631ab181f18cfad439600196 267 Pfam PF08282 haloacid dehalogenase-like hydrolase 9 260 2.2E-61 T 13-10-2018 VEA_000934 2bef10b7631ab181f18cfad439600196 267 Gene3D G3DSA:3.30.1240.10 85 190 1.3E-78 T 13-10-2018 VEA_000934 2bef10b7631ab181f18cfad439600196 267 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 9 260 1.1E-51 T 13-10-2018 IPR000150 Cof family GO:0016787 VEA_000934 2bef10b7631ab181f18cfad439600196 267 SUPERFAMILY SSF56784 5 264 1.63E-66 T 13-10-2018 IPR036412 HAD-like superfamily VEA_003987 b01e1bde401767b0fbacb90f894d0a60 582 Pfam PF00005 ABC transporter 359 509 2.1E-36 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_003987 b01e1bde401767b0fbacb90f894d0a60 582 Pfam PF00664 ABC transporter transmembrane region 28 293 9.1E-57 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VEA_003987 b01e1bde401767b0fbacb90f894d0a60 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 582 2.6E-242 T 13-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 VEA_003987 b01e1bde401767b0fbacb90f894d0a60 582 Gene3D G3DSA:3.40.50.300 329 581 8.9E-97 T 13-10-2018 VEA_003987 b01e1bde401767b0fbacb90f894d0a60 582 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_003987 b01e1bde401767b0fbacb90f894d0a60 582 Gene3D G3DSA:1.20.1560.10 2 328 7.2E-84 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEA_003987 b01e1bde401767b0fbacb90f894d0a60 582 SUPERFAMILY SSF52540 331 580 6.76E-94 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003987 b01e1bde401767b0fbacb90f894d0a60 582 SUPERFAMILY SSF90123 14 327 5.23E-76 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEA_003987 b01e1bde401767b0fbacb90f894d0a60 582 SMART SM00382 368 555 1.0E-19 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_003926 a9fc8c3af8248d5a4ab2400cd4c55d22 592 Gene3D G3DSA:2.40.50.140 1 106 1.8E-34 T 13-10-2018 VEA_003926 a9fc8c3af8248d5a4ab2400cd4c55d22 592 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 2.7E-105 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEA_003926 a9fc8c3af8248d5a4ab2400cd4c55d22 592 Gene3D G3DSA:3.30.1360.30 271 420 6.3E-196 T 13-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 VEA_003926 a9fc8c3af8248d5a4ab2400cd4c55d22 592 Gene3D G3DSA:3.30.930.10 118 578 6.3E-196 T 13-10-2018 VEA_003926 a9fc8c3af8248d5a4ab2400cd4c55d22 592 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 584 33.376 T 13-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 VEA_003926 a9fc8c3af8248d5a4ab2400cd4c55d22 592 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 3.7E-16 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VEA_003926 a9fc8c3af8248d5a4ab2400cd4c55d22 592 SUPERFAMILY SSF55681 108 583 4.02E-102 T 13-10-2018 VEA_003926 a9fc8c3af8248d5a4ab2400cd4c55d22 592 Pfam PF02938 GAD domain 307 406 4.5E-30 T 13-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 VEA_003926 a9fc8c3af8248d5a4ab2400cd4c55d22 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 2.7E-26 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEA_003926 a9fc8c3af8248d5a4ab2400cd4c55d22 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 2.7E-26 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEA_003926 a9fc8c3af8248d5a4ab2400cd4c55d22 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 2.7E-26 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEA_003926 a9fc8c3af8248d5a4ab2400cd4c55d22 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 2.7E-26 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEA_003926 a9fc8c3af8248d5a4ab2400cd4c55d22 592 SUPERFAMILY SSF50249 1 105 4.0E-34 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_003926 a9fc8c3af8248d5a4ab2400cd4c55d22 592 SUPERFAMILY SSF55261 288 419 3.43E-46 T 13-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 VEA_003926 a9fc8c3af8248d5a4ab2400cd4c55d22 592 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 7.5E-267 T 13-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 VEA_004359 e68d807856b2f9c7b7030cd46418b563 127 SUPERFAMILY SSF82649 1 125 6.54E-48 T 13-10-2018 VEA_004359 e68d807856b2f9c7b7030cd46418b563 127 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 2.1E-69 T 13-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 VEA_004359 e68d807856b2f9c7b7030cd46418b563 127 Pfam PF01592 NifU-like N terminal domain 2 126 1.7E-56 T 13-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 VEA_004359 e68d807856b2f9c7b7030cd46418b563 127 Gene3D G3DSA:3.90.1010.10 1 127 5.6E-59 T 13-10-2018 VEA_003799 c10a253bfc9052e547513bbce54613a6 553 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 551 1.0E-225 T 13-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 VEA_003799 c10a253bfc9052e547513bbce54613a6 553 Gene3D G3DSA:1.20.1270.20 1 143 1.6E-37 T 13-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 VEA_003799 c10a253bfc9052e547513bbce54613a6 553 Gene3D G3DSA:3.40.50.2030 383 551 6.3E-61 T 13-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 VEA_003799 c10a253bfc9052e547513bbce54613a6 553 SUPERFAMILY SSF56821 1 551 8.37E-196 T 13-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 VEA_003799 c10a253bfc9052e547513bbce54613a6 553 Pfam PF03063 Prismane/CO dehydrogenase family 1 548 4.5E-163 T 13-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 VEA_003799 c10a253bfc9052e547513bbce54613a6 553 Gene3D G3DSA:1.20.1270.20 153 235 4.2E-29 T 13-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 VEA_003799 c10a253bfc9052e547513bbce54613a6 553 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 552 20.241 T 13-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 VEA_003799 c10a253bfc9052e547513bbce54613a6 553 PIRSF PIRSF000076 1 553 2.4E-244 T 13-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 VEA_003799 c10a253bfc9052e547513bbce54613a6 553 Gene3D G3DSA:3.40.50.2030 237 382 1.8E-63 T 13-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 VEA_000467 2a5f0b0cc85fc9c8e00a5db5cbec6f26 1057 SMART SM00028 726 759 430.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_000467 2a5f0b0cc85fc9c8e00a5db5cbec6f26 1057 SMART SM00028 649 682 0.003 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_000467 2a5f0b0cc85fc9c8e00a5db5cbec6f26 1057 SMART SM00028 766 799 0.15 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_000467 2a5f0b0cc85fc9c8e00a5db5cbec6f26 1057 SMART SM00028 686 719 440.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_000467 2a5f0b0cc85fc9c8e00a5db5cbec6f26 1057 SMART SM00028 886 919 100.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_000467 2a5f0b0cc85fc9c8e00a5db5cbec6f26 1057 SMART SM00028 613 646 260.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_000467 2a5f0b0cc85fc9c8e00a5db5cbec6f26 1057 Gene3D G3DSA:1.10.260.40 12 77 2.6E-9 T 13-10-2018 VEA_000467 2a5f0b0cc85fc9c8e00a5db5cbec6f26 1057 SMART SM00530 14 73 9.3E-4 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VEA_000467 2a5f0b0cc85fc9c8e00a5db5cbec6f26 1057 SUPERFAMILY SSF52540 224 486 1.38E-13 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000467 2a5f0b0cc85fc9c8e00a5db5cbec6f26 1057 Gene3D G3DSA:1.25.40.10 612 725 1.6E-11 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_000467 2a5f0b0cc85fc9c8e00a5db5cbec6f26 1057 SUPERFAMILY SSF47413 13 75 5.63E-6 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEA_000467 2a5f0b0cc85fc9c8e00a5db5cbec6f26 1057 SUPERFAMILY SSF48452 618 755 1.21E-13 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_000467 2a5f0b0cc85fc9c8e00a5db5cbec6f26 1057 Pfam PF13191 AAA ATPase domain 237 421 5.7E-13 T 13-10-2018 VEA_000467 2a5f0b0cc85fc9c8e00a5db5cbec6f26 1057 SUPERFAMILY SSF48452 696 912 3.07E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_001917 c42cc74a161c34fd2b482caf365e6340 928 SUPERFAMILY SSF47807 171 291 5.68E-30 T 13-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily VEA_001917 c42cc74a161c34fd2b482caf365e6340 928 Gene3D G3DSA:1.20.1060.10 542 657 7.4E-44 T 13-10-2018 VEA_001917 c42cc74a161c34fd2b482caf365e6340 928 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 271 1.8E-28 T 13-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 VEA_001917 c42cc74a161c34fd2b482caf365e6340 928 ProSitePatterns PS00447 DNA polymerase family A signature. 753 772 - T 13-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_001917 c42cc74a161c34fd2b482caf365e6340 928 SMART SM00482 685 892 6.8E-117 T 13-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_001917 c42cc74a161c34fd2b482caf365e6340 928 Pfam PF00476 DNA polymerase family A 550 925 1.8E-157 T 13-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_001917 c42cc74a161c34fd2b482caf365e6340 928 Gene3D G3DSA:3.30.70.370 663 924 1.2E-113 T 13-10-2018 VEA_001917 c42cc74a161c34fd2b482caf365e6340 928 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 1.8E-54 T 13-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 VEA_001917 c42cc74a161c34fd2b482caf365e6340 928 SUPERFAMILY SSF53098 332 517 5.14E-54 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VEA_001917 c42cc74a161c34fd2b482caf365e6340 928 TIGRFAM TIGR00593 pola: DNA polymerase I 9 928 9.9E-287 T 13-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_001917 c42cc74a161c34fd2b482caf365e6340 928 Gene3D G3DSA:3.30.420.10 326 541 4.1E-67 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VEA_001917 c42cc74a161c34fd2b482caf365e6340 928 Gene3D G3DSA:3.40.50.1010 9 284 4.4E-95 T 13-10-2018 VEA_001917 c42cc74a161c34fd2b482caf365e6340 928 SMART SM00279 173 208 1.2E-13 T 13-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 VEA_001917 c42cc74a161c34fd2b482caf365e6340 928 Gene3D G3DSA:1.10.150.20 174 253 4.4E-95 T 13-10-2018 VEA_001917 c42cc74a161c34fd2b482caf365e6340 928 SUPERFAMILY SSF88723 7 170 1.45E-57 T 13-10-2018 IPR029060 PIN-like domain superfamily VEA_001917 c42cc74a161c34fd2b482caf365e6340 928 Gene3D G3DSA:1.10.150.20 708 851 1.2E-113 T 13-10-2018 VEA_001917 c42cc74a161c34fd2b482caf365e6340 928 Pfam PF01612 3'-5' exonuclease 329 513 1.7E-36 T 13-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VEA_001917 c42cc74a161c34fd2b482caf365e6340 928 SMART SM00475 7 267 1.1E-123 T 13-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 VEA_001917 c42cc74a161c34fd2b482caf365e6340 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 677 692 5.1E-78 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_001917 c42cc74a161c34fd2b482caf365e6340 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 699 722 5.1E-78 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_001917 c42cc74a161c34fd2b482caf365e6340 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 812 823 5.1E-78 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_001917 c42cc74a161c34fd2b482caf365e6340 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 654 676 5.1E-78 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_001917 c42cc74a161c34fd2b482caf365e6340 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 729 742 5.1E-78 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_001917 c42cc74a161c34fd2b482caf365e6340 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 790 801 5.1E-78 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_001917 c42cc74a161c34fd2b482caf365e6340 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 875 888 5.1E-78 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_001917 c42cc74a161c34fd2b482caf365e6340 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 844 860 5.1E-78 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_001917 c42cc74a161c34fd2b482caf365e6340 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 753 778 5.1E-78 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_001917 c42cc74a161c34fd2b482caf365e6340 928 SMART SM00474 329 516 2.3E-37 T 13-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VEA_001917 c42cc74a161c34fd2b482caf365e6340 928 SUPERFAMILY SSF56672 522 928 5.11E-160 T 13-10-2018 VEA_000101 61d9d2c89e30b25f5479fc8ccebbf250 102 Gene3D G3DSA:1.10.10.10 7 102 4.7E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000101 61d9d2c89e30b25f5479fc8ccebbf250 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 22 37 3.7E-9 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEA_000101 61d9d2c89e30b25f5479fc8ccebbf250 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 54 69 3.7E-9 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEA_000101 61d9d2c89e30b25f5479fc8ccebbf250 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 69 84 3.7E-9 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEA_000101 61d9d2c89e30b25f5479fc8ccebbf250 102 SMART SM00418 20 98 4.4E-15 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEA_000101 61d9d2c89e30b25f5479fc8ccebbf250 102 SUPERFAMILY SSF46785 14 101 7.66E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000101 61d9d2c89e30b25f5479fc8ccebbf250 102 Pfam PF01022 Bacterial regulatory protein, arsR family 27 71 1.3E-6 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEA_000123 82da7fcf9e413c0da310ff10b94f87b3 412 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 236 346 7.2E-24 T 13-10-2018 IPR000160 GGDEF domain VEA_000123 82da7fcf9e413c0da310ff10b94f87b3 412 SMART SM00267 227 412 2.5E-37 T 13-10-2018 IPR000160 GGDEF domain VEA_000123 82da7fcf9e413c0da310ff10b94f87b3 412 SUPERFAMILY SSF55073 243 411 1.02E-33 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_000123 82da7fcf9e413c0da310ff10b94f87b3 412 Gene3D G3DSA:3.30.70.270 229 412 4.7E-46 T 13-10-2018 VEA_000123 82da7fcf9e413c0da310ff10b94f87b3 412 Pfam PF00990 Diguanylate cyclase, GGDEF domain 366 407 2.4E-6 T 13-10-2018 IPR000160 GGDEF domain VEA_000123 82da7fcf9e413c0da310ff10b94f87b3 412 Pfam PF00990 Diguanylate cyclase, GGDEF domain 238 344 2.8E-23 T 13-10-2018 IPR000160 GGDEF domain VEA_000690 542d1ff962709f972853d35083851f2c 555 SUPERFAMILY SSF53850 123 551 2.53E-43 T 13-10-2018 VEA_000690 542d1ff962709f972853d35083851f2c 555 Pfam PF12793 Sugar transport-related sRNA regulator N-term 11 110 7.5E-17 T 13-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain VEA_000690 542d1ff962709f972853d35083851f2c 555 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 166 310 9.7E-19 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain VEA_000690 542d1ff962709f972853d35083851f2c 555 Gene3D G3DSA:3.40.190.10 112 374 3.7E-31 T 13-10-2018 VEA_002469 8b0bf3f767e753ba0405d6cc79f2bca0 297 Gene3D G3DSA:3.40.190.290 91 290 2.1E-32 T 13-10-2018 VEA_002469 8b0bf3f767e753ba0405d6cc79f2bca0 297 Gene3D G3DSA:1.10.10.10 1 90 1.0E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_002469 8b0bf3f767e753ba0405d6cc79f2bca0 297 SUPERFAMILY SSF53850 87 293 5.25E-29 T 13-10-2018 VEA_002469 8b0bf3f767e753ba0405d6cc79f2bca0 297 Pfam PF03466 LysR substrate binding domain 88 290 1.9E-22 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_002469 8b0bf3f767e753ba0405d6cc79f2bca0 297 SUPERFAMILY SSF46785 2 112 6.22E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_002469 8b0bf3f767e753ba0405d6cc79f2bca0 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 5.6E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_002328 390bcab48060469168fe082348abdcad 366 PIRSF PIRSF001455 22 363 2.5E-108 T 13-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 VEA_002328 390bcab48060469168fe082348abdcad 366 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 14 359 1.3E-120 T 13-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 VEA_002328 390bcab48060469168fe082348abdcad 366 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 360 74.618 T 13-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 VEA_002328 390bcab48060469168fe082348abdcad 366 SUPERFAMILY SSF56796 4 360 6.41E-118 T 13-10-2018 VEA_002328 390bcab48060469168fe082348abdcad 366 Gene3D G3DSA:1.20.1090.10 177 366 7.9E-70 T 13-10-2018 VEA_002328 390bcab48060469168fe082348abdcad 366 Pfam PF01761 3-dehydroquinate synthase 72 329 3.5E-111 T 13-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 VEA_002328 390bcab48060469168fe082348abdcad 366 Gene3D G3DSA:3.40.50.1970 1 176 8.5E-66 T 13-10-2018 VEA_000569 e6716519b850e1be4227570ebfb676fa 252 SMART SM00530 10 65 7.5E-4 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VEA_000569 e6716519b850e1be4227570ebfb676fa 252 SUPERFAMILY SSF47413 5 68 2.57E-7 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEA_000569 e6716519b850e1be4227570ebfb676fa 252 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 11 68 1.7E-7 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VEA_000569 e6716519b850e1be4227570ebfb676fa 252 Gene3D G3DSA:1.10.260.40 3 70 2.5E-5 T 13-10-2018 VEA_003002 1df450898e74511d8b24da78b7a09f7f 320 Pfam PF13177 DNA polymerase III, delta subunit 12 164 5.6E-45 T 13-10-2018 VEA_003002 1df450898e74511d8b24da78b7a09f7f 320 SUPERFAMILY SSF52540 2 179 1.41E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003002 1df450898e74511d8b24da78b7a09f7f 320 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 208 314 6.8E-19 T 13-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_003002 1df450898e74511d8b24da78b7a09f7f 320 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 13 198 4.6E-65 T 13-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_003002 1df450898e74511d8b24da78b7a09f7f 320 SUPERFAMILY SSF48019 208 319 1.6E-13 T 13-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 VEA_003002 1df450898e74511d8b24da78b7a09f7f 320 Gene3D G3DSA:3.40.50.300 2 167 6.5E-50 T 13-10-2018 VEA_000691 ac03ca70c7aa8e24b857c68b5a0988ae 204 Pfam PF01389 OmpA-like transmembrane domain 22 204 2.5E-23 T 13-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 VEA_000691 ac03ca70c7aa8e24b857c68b5a0988ae 204 SUPERFAMILY SSF56925 21 204 1.36E-28 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VEA_000691 ac03ca70c7aa8e24b857c68b5a0988ae 204 Gene3D G3DSA:2.40.160.20 7 204 6.1E-39 T 13-10-2018 VEA_002181 772664e736cd78f76c0a2d92e588a1dd 377 Pfam PF00571 CBS domain 261 313 1.7E-6 T 13-10-2018 IPR000644 CBS domain VEA_002181 772664e736cd78f76c0a2d92e588a1dd 377 SMART SM00116 265 313 0.0085 T 13-10-2018 IPR000644 CBS domain VEA_002181 772664e736cd78f76c0a2d92e588a1dd 377 SUPERFAMILY SSF54631 181 315 1.77E-27 T 13-10-2018 VEA_002181 772664e736cd78f76c0a2d92e588a1dd 377 Pfam PF01595 Domain of unknown function DUF21 9 177 3.8E-29 T 13-10-2018 IPR002550 CNNM, transmembrane domain VEA_002181 772664e736cd78f76c0a2d92e588a1dd 377 Gene3D G3DSA:3.10.580.10 186 315 9.7E-43 T 13-10-2018 VEA_000906 4b96da343bf297685dfc5ba044828279 206 Gene3D G3DSA:3.40.50.1000 9 196 1.1E-30 T 13-10-2018 IPR023214 HAD superfamily VEA_000906 4b96da343bf297685dfc5ba044828279 206 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 9 192 1.3E-25 T 13-10-2018 VEA_000906 4b96da343bf297685dfc5ba044828279 206 Pfam PF12710 haloacid dehalogenase-like hydrolase 10 190 1.1E-30 T 13-10-2018 VEA_000906 4b96da343bf297685dfc5ba044828279 206 SUPERFAMILY SSF56784 6 193 2.38E-22 T 13-10-2018 IPR036412 HAD-like superfamily VEA_000906 4b96da343bf297685dfc5ba044828279 206 Gene3D G3DSA:1.20.1440.100 21 93 1.1E-30 T 13-10-2018 VEA_000906 4b96da343bf297685dfc5ba044828279 206 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 9 195 6.0E-33 T 13-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like VEA_003605 d542081e19c2970c623a269817e27387 177 Gene3D G3DSA:3.40.630.30 20 177 8.6E-43 T 13-10-2018 VEA_003605 d542081e19c2970c623a269817e27387 177 SUPERFAMILY SSF55729 23 142 2.66E-19 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_003605 d542081e19c2970c623a269817e27387 177 Pfam PF00583 Acetyltransferase (GNAT) family 57 142 3.1E-15 T 13-10-2018 IPR000182 GNAT domain VEA_003605 d542081e19c2970c623a269817e27387 177 TIGRFAM TIGR02406 ectoine_EctA: diaminobutyrate acetyltransferase 23 176 1.2E-67 T 13-10-2018 IPR012772 L-2,4-diaminobutyric acid acetyltransferase GO:0019491|GO:0033816 KEGG: 00260+2.3.1.178 VEA_001060 f319f81cf11347c66ef7eec2ae37aab9 476 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 373 475 4.4E-15 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_001060 f319f81cf11347c66ef7eec2ae37aab9 476 SUPERFAMILY SSF55874 336 475 1.57E-26 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_001060 f319f81cf11347c66ef7eec2ae37aab9 476 Gene3D G3DSA:1.10.287.130 226 332 2.3E-14 T 13-10-2018 VEA_001060 f319f81cf11347c66ef7eec2ae37aab9 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 455 1.5E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_001060 f319f81cf11347c66ef7eec2ae37aab9 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 420 1.5E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_001060 f319f81cf11347c66ef7eec2ae37aab9 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 434 1.5E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_001060 f319f81cf11347c66ef7eec2ae37aab9 476 SMART SM00387 372 476 5.9E-20 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_001060 f319f81cf11347c66ef7eec2ae37aab9 476 Gene3D G3DSA:3.30.565.10 333 475 3.4E-25 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_001060 f319f81cf11347c66ef7eec2ae37aab9 476 SUPERFAMILY SSF47384 259 311 1.18E-8 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEA_000105 11b1186b31e38b4d0b3163b3219ce7a6 351 Gene3D G3DSA:2.40.30.170 60 290 4.3E-57 T 13-10-2018 VEA_000105 11b1186b31e38b4d0b3163b3219ce7a6 351 Gene3D G3DSA:2.40.50.100 72 212 4.3E-57 T 13-10-2018 VEA_000105 11b1186b31e38b4d0b3163b3219ce7a6 351 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 70 273 4.2E-20 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VEA_000105 11b1186b31e38b4d0b3163b3219ce7a6 351 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 60 347 2.6E-58 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VEA_000105 11b1186b31e38b4d0b3163b3219ce7a6 351 SUPERFAMILY SSF111369 60 289 3.66E-27 T 13-10-2018 VEA_000105 11b1186b31e38b4d0b3163b3219ce7a6 351 Gene3D G3DSA:2.40.420.20 59 344 4.3E-57 T 13-10-2018 VEA_000105 11b1186b31e38b4d0b3163b3219ce7a6 351 Gene3D G3DSA:1.10.287.470 106 177 4.3E-57 T 13-10-2018 VEA_003262 0b851a403f56be3f63b1ae986ca9b006 100 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 3 86 4.9E-7 T 13-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VEA_003262 0b851a403f56be3f63b1ae986ca9b006 100 Gene3D G3DSA:3.30.2310.20 1 96 2.8E-20 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VEA_003262 0b851a403f56be3f63b1ae986ca9b006 100 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 91 4.3E-19 T 13-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VEA_000160 af70e737f5a5311fca414bdcfcf1374a 338 SUPERFAMILY SSF51735 1 335 5.27E-99 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_000160 af70e737f5a5311fca414bdcfcf1374a 338 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 1.6E-5 T 13-10-2018 VEA_000160 af70e737f5a5311fca414bdcfcf1374a 338 PRINTS PR01713 Nucleotide sugar epimerase signature 230 245 1.6E-5 T 13-10-2018 VEA_000160 af70e737f5a5311fca414bdcfcf1374a 338 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 1.6E-5 T 13-10-2018 VEA_000160 af70e737f5a5311fca414bdcfcf1374a 338 Gene3D G3DSA:3.40.50.720 3 273 1.8E-142 T 13-10-2018 VEA_000160 af70e737f5a5311fca414bdcfcf1374a 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 334 2.5E-143 T 13-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 VEA_000160 af70e737f5a5311fca414bdcfcf1374a 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 322 8.7E-63 T 13-10-2018 IPR016040 NAD(P)-binding domain VEA_000160 af70e737f5a5311fca414bdcfcf1374a 338 Gene3D G3DSA:3.90.25.10 193 328 1.8E-142 T 13-10-2018 VEA_001798 f6be501ab77028ea0810cde5a1f29752 352 Pfam PF00571 CBS domain 8 54 3.7E-9 T 13-10-2018 IPR000644 CBS domain VEA_001798 f6be501ab77028ea0810cde5a1f29752 352 Pfam PF00571 CBS domain 63 106 1.1E-4 T 13-10-2018 IPR000644 CBS domain VEA_001798 f6be501ab77028ea0810cde5a1f29752 352 SUPERFAMILY SSF54631 7 56 4.59E-9 T 13-10-2018 VEA_001798 f6be501ab77028ea0810cde5a1f29752 352 Pfam PF00483 Nucleotidyl transferase 124 346 1.5E-37 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 VEA_001798 f6be501ab77028ea0810cde5a1f29752 352 SMART SM00116 6 54 0.034 T 13-10-2018 IPR000644 CBS domain VEA_001798 f6be501ab77028ea0810cde5a1f29752 352 SMART SM00116 70 117 4.1 T 13-10-2018 IPR000644 CBS domain VEA_001798 f6be501ab77028ea0810cde5a1f29752 352 Gene3D G3DSA:3.90.550.10 121 348 3.3E-62 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEA_001798 f6be501ab77028ea0810cde5a1f29752 352 SUPERFAMILY SSF53448 48 346 1.24E-70 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEA_001798 f6be501ab77028ea0810cde5a1f29752 352 Gene3D G3DSA:3.10.580.10 1 114 5.0E-22 T 13-10-2018 VEA_000599 4de91a9596f194b5a4aa8de94d600437 479 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 28 110 8.4E-24 T 13-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VEA_000599 4de91a9596f194b5a4aa8de94d600437 479 Pfam PF02378 Phosphotransferase system, EIIC 110 410 1.2E-49 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VEA_000599 4de91a9596f194b5a4aa8de94d600437 479 Pfam PF00367 phosphotransferase system, EIIB 8 41 1.0E-13 T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VEA_000599 4de91a9596f194b5a4aa8de94d600437 479 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VEA_000599 4de91a9596f194b5a4aa8de94d600437 479 Gene3D G3DSA:3.30.1360.60 1 78 7.3E-25 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VEA_000599 4de91a9596f194b5a4aa8de94d600437 479 SUPERFAMILY SSF55604 6 82 1.12E-20 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VEA_000599 4de91a9596f194b5a4aa8de94d600437 479 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 2 464 1.2E-196 T 13-10-2018 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 VEA_000599 4de91a9596f194b5a4aa8de94d600437 479 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 164 453 7.8E-95 T 13-10-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 VEA_002832 822b7dd6f12e4b34e022265e69eea51e 244 SUPERFAMILY SSF88659 92 164 1.4E-16 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VEA_002832 822b7dd6f12e4b34e022265e69eea51e 244 SUPERFAMILY SSF88946 6 91 3.79E-24 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VEA_002832 822b7dd6f12e4b34e022265e69eea51e 244 SUPERFAMILY SSF88659 155 239 7.85E-20 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VEA_002832 822b7dd6f12e4b34e022265e69eea51e 244 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 19 238 2.8E-86 T 13-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VEA_002832 822b7dd6f12e4b34e022265e69eea51e 244 PRINTS PR00046 Major sigma-70 factor signature 46 59 1.2E-11 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEA_002832 822b7dd6f12e4b34e022265e69eea51e 244 PRINTS PR00046 Major sigma-70 factor signature 207 222 1.2E-11 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEA_002832 822b7dd6f12e4b34e022265e69eea51e 244 PRINTS PR00046 Major sigma-70 factor signature 222 233 1.2E-11 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEA_002832 822b7dd6f12e4b34e022265e69eea51e 244 PRINTS PR00046 Major sigma-70 factor signature 190 202 1.2E-11 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEA_002832 822b7dd6f12e4b34e022265e69eea51e 244 Pfam PF04545 Sigma-70, region 4 187 234 4.0E-18 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 VEA_002832 822b7dd6f12e4b34e022265e69eea51e 244 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 237 3.8E-32 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VEA_002832 822b7dd6f12e4b34e022265e69eea51e 244 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 7 240 62.664 T 13-10-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VEA_002832 822b7dd6f12e4b34e022265e69eea51e 244 PIRSF PIRSF000770 2 243 2.7E-39 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEA_002832 822b7dd6f12e4b34e022265e69eea51e 244 Gene3D G3DSA:1.10.1740.10 5 88 2.1E-28 T 13-10-2018 VEA_002832 822b7dd6f12e4b34e022265e69eea51e 244 Gene3D G3DSA:1.20.140.160 90 239 2.0E-45 T 13-10-2018 VEA_002832 822b7dd6f12e4b34e022265e69eea51e 244 Pfam PF04539 Sigma-70 region 3 100 161 2.3E-12 T 13-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 VEA_002832 822b7dd6f12e4b34e022265e69eea51e 244 Pfam PF04542 Sigma-70 region 2 19 91 5.0E-16 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VEA_002096 4f1e432e0c9803ca4854ec3dc5e694ab 439 SMART SM00487 28 234 2.0E-56 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEA_002096 4f1e432e0c9803ca4854ec3dc5e694ab 439 Gene3D G3DSA:3.40.50.300 2 222 4.6E-72 T 13-10-2018 VEA_002096 4f1e432e0c9803ca4854ec3dc5e694ab 439 Gene3D G3DSA:3.40.50.300 229 407 1.1E-46 T 13-10-2018 VEA_002096 4f1e432e0c9803ca4854ec3dc5e694ab 439 Pfam PF00270 DEAD/DEAH box helicase 33 207 1.3E-46 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VEA_002096 4f1e432e0c9803ca4854ec3dc5e694ab 439 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 51.147 T 13-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 VEA_002096 4f1e432e0c9803ca4854ec3dc5e694ab 439 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VEA_002096 4f1e432e0c9803ca4854ec3dc5e694ab 439 SMART SM00490 270 351 1.2E-32 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_002096 4f1e432e0c9803ca4854ec3dc5e694ab 439 SUPERFAMILY SSF52540 85 363 6.41E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002096 4f1e432e0c9803ca4854ec3dc5e694ab 439 Pfam PF00271 Helicase conserved C-terminal domain 243 351 1.1E-30 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_001772 865ba7c4642ea80957f8dab4191d9fe1 340 SUPERFAMILY SSF51735 1 338 3.53E-84 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_001772 865ba7c4642ea80957f8dab4191d9fe1 340 PRINTS PR01713 Nucleotide sugar epimerase signature 301 318 3.3E-6 T 13-10-2018 VEA_001772 865ba7c4642ea80957f8dab4191d9fe1 340 PRINTS PR01713 Nucleotide sugar epimerase signature 257 272 3.3E-6 T 13-10-2018 VEA_001772 865ba7c4642ea80957f8dab4191d9fe1 340 PRINTS PR01713 Nucleotide sugar epimerase signature 233 248 3.3E-6 T 13-10-2018 VEA_001772 865ba7c4642ea80957f8dab4191d9fe1 340 PRINTS PR01713 Nucleotide sugar epimerase signature 44 60 3.3E-6 T 13-10-2018 VEA_001772 865ba7c4642ea80957f8dab4191d9fe1 340 Pfam PF01370 NAD dependent epimerase/dehydratase family 18 263 2.7E-56 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VEA_001772 865ba7c4642ea80957f8dab4191d9fe1 340 Gene3D G3DSA:3.90.25.10 193 334 3.5E-114 T 13-10-2018 VEA_001772 865ba7c4642ea80957f8dab4191d9fe1 340 Gene3D G3DSA:3.40.50.720 19 322 3.5E-114 T 13-10-2018 VEA_004159 5cef2448e92803417a3f4397cd74a868 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 2.8E-50 T 13-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 VEA_004159 5cef2448e92803417a3f4397cd74a868 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 13-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 VEA_004159 5cef2448e92803417a3f4397cd74a868 169 SUPERFAMILY SSF51261 18 166 3.31E-55 T 13-10-2018 IPR011055 Duplicated hybrid motif VEA_004159 5cef2448e92803417a3f4397cd74a868 169 Gene3D G3DSA:2.70.70.10 9 169 6.2E-62 T 13-10-2018 IPR011055 Duplicated hybrid motif VEA_004159 5cef2448e92803417a3f4397cd74a868 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 3.1E-49 T 13-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 VEA_001253 83948633e50a63a3c12009ebb119eb3b 308 Gene3D G3DSA:2.40.440.10 27 306 1.6E-85 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VEA_001253 83948633e50a63a3c12009ebb119eb3b 308 SUPERFAMILY SSF54106 47 91 9.16E-7 T 13-10-2018 VEA_001253 83948633e50a63a3c12009ebb119eb3b 308 Pfam PF03734 L,D-transpeptidase catalytic domain 103 238 1.9E-22 T 13-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 VEA_001253 83948633e50a63a3c12009ebb119eb3b 308 SUPERFAMILY SSF141523 100 238 5.1E-30 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VEA_001253 83948633e50a63a3c12009ebb119eb3b 308 SMART SM00257 47 91 0.0013 T 13-10-2018 IPR018392 LysM domain VEA_001253 83948633e50a63a3c12009ebb119eb3b 308 Pfam PF01476 LysM domain 48 91 5.4E-7 T 13-10-2018 IPR018392 LysM domain VEA_000220 04d99d9c90a4081cbfa1f6096d1edf00 317 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 44 306 6.3E-9 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VEA_000220 04d99d9c90a4081cbfa1f6096d1edf00 317 SUPERFAMILY SSF56219 5 312 8.24E-31 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VEA_000220 04d99d9c90a4081cbfa1f6096d1edf00 317 Gene3D G3DSA:3.60.10.10 2 312 6.2E-32 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VEA_000810 e317c7c3d10cf3b739814d2e33b6641a 408 Pfam PF01266 FAD dependent oxidoreductase 6 397 5.8E-65 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VEA_000810 e317c7c3d10cf3b739814d2e33b6641a 408 Gene3D G3DSA:3.30.9.10 89 359 9.5E-82 T 13-10-2018 VEA_000810 e317c7c3d10cf3b739814d2e33b6641a 408 SUPERFAMILY SSF51905 5 300 1.94E-44 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_000810 e317c7c3d10cf3b739814d2e33b6641a 408 Gene3D G3DSA:3.50.50.60 6 393 9.5E-82 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_000352 8d640f4d94d76c8a4cf0aa5a5c734935 450 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 54 182 1.8E-51 T 13-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 VEA_000352 8d640f4d94d76c8a4cf0aa5a5c734935 450 PIRSF PIRSF000185 19 450 1.8E-112 T 13-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 VEA_000352 8d640f4d94d76c8a4cf0aa5a5c734935 450 Gene3D G3DSA:1.10.285.10 386 450 1.3E-8 T 13-10-2018 VEA_000352 8d640f4d94d76c8a4cf0aa5a5c734935 450 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 199 448 4.3E-79 T 13-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 VEA_000352 8d640f4d94d76c8a4cf0aa5a5c734935 450 SUPERFAMILY SSF53223 8 193 6.72E-73 T 13-10-2018 VEA_000352 8d640f4d94d76c8a4cf0aa5a5c734935 450 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 374 385 1.2E-28 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 VEA_000352 8d640f4d94d76c8a4cf0aa5a5c734935 450 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 111 125 1.2E-28 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 VEA_000352 8d640f4d94d76c8a4cf0aa5a5c734935 450 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 190 212 1.2E-28 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 VEA_000352 8d640f4d94d76c8a4cf0aa5a5c734935 450 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 232 252 1.2E-28 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 VEA_000352 8d640f4d94d76c8a4cf0aa5a5c734935 450 SUPERFAMILY SSF51735 199 449 4.53E-69 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_000352 8d640f4d94d76c8a4cf0aa5a5c734935 450 Gene3D G3DSA:3.40.50.720 206 375 3.0E-162 T 13-10-2018 VEA_000352 8d640f4d94d76c8a4cf0aa5a5c734935 450 Gene3D G3DSA:3.40.50.10860 52 187 3.0E-162 T 13-10-2018 VEA_000352 8d640f4d94d76c8a4cf0aa5a5c734935 450 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 119 132 - T 13-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 VEA_000352 8d640f4d94d76c8a4cf0aa5a5c734935 450 Gene3D G3DSA:1.10.285.10 7 385 3.0E-162 T 13-10-2018 VEA_000352 8d640f4d94d76c8a4cf0aa5a5c734935 450 SMART SM00839 201 448 1.5E-73 T 13-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 VEA_002963 13bdcedf9c8ecc8f09fe274bea2b7074 331 SMART SM00382 47 240 2.2E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_002963 13bdcedf9c8ecc8f09fe274bea2b7074 331 Gene3D G3DSA:3.40.50.300 8 331 7.6E-97 T 13-10-2018 VEA_002963 13bdcedf9c8ecc8f09fe274bea2b7074 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 327 3.0E-26 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VEA_002963 13bdcedf9c8ecc8f09fe274bea2b7074 331 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_002963 13bdcedf9c8ecc8f09fe274bea2b7074 331 Pfam PF00005 ABC transporter 39 190 1.2E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_002963 13bdcedf9c8ecc8f09fe274bea2b7074 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 242 309 3.6E-19 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VEA_002963 13bdcedf9c8ecc8f09fe274bea2b7074 331 SUPERFAMILY SSF52540 32 262 5.19E-73 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002495 cffce8fd33fae2577559ee6cff8f3abc 554 Gene3D G3DSA:3.30.70.870 243 324 1.1E-35 T 13-10-2018 VEA_002495 cffce8fd33fae2577559ee6cff8f3abc 554 Gene3D G3DSA:3.30.70.3380 325 435 3.3E-40 T 13-10-2018 VEA_002495 cffce8fd33fae2577559ee6cff8f3abc 554 Gene3D G3DSA:2.40.30.10 143 242 3.8E-34 T 13-10-2018 VEA_002495 cffce8fd33fae2577559ee6cff8f3abc 554 SUPERFAMILY SSF52540 1 162 4.1E-41 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002495 cffce8fd33fae2577559ee6cff8f3abc 554 Pfam PF00679 Elongation factor G C-terminus 356 439 3.2E-20 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like VEA_002495 cffce8fd33fae2577559ee6cff8f3abc 554 PRINTS PR00315 GTP-binding elongation factor signature 47 58 1.9E-7 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_002495 cffce8fd33fae2577559ee6cff8f3abc 554 PRINTS PR00315 GTP-binding elongation factor signature 31 41 1.9E-7 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_002495 cffce8fd33fae2577559ee6cff8f3abc 554 PRINTS PR00315 GTP-binding elongation factor signature 6 14 1.9E-7 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_002495 cffce8fd33fae2577559ee6cff8f3abc 554 PRINTS PR00315 GTP-binding elongation factor signature 83 92 1.9E-7 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_002495 cffce8fd33fae2577559ee6cff8f3abc 554 TIGRFAM TIGR01393 lepA: elongation factor 4 1 551 1.1E-276 T 13-10-2018 IPR006297 Elongation factor 4 GO:0005525 VEA_002495 cffce8fd33fae2577559ee6cff8f3abc 554 Pfam PF06421 GTP-binding protein LepA C-terminus 444 549 1.9E-49 T 13-10-2018 IPR013842 GTP-binding protein LepA, C-terminal VEA_002495 cffce8fd33fae2577559ee6cff8f3abc 554 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 133 1.7E-12 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VEA_002495 cffce8fd33fae2577559ee6cff8f3abc 554 Pfam PF03144 Elongation factor Tu domain 2 162 232 4.2E-10 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VEA_002495 cffce8fd33fae2577559ee6cff8f3abc 554 SMART SM00838 355 443 0.0043 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like VEA_002495 cffce8fd33fae2577559ee6cff8f3abc 554 SUPERFAMILY SSF50447 122 245 2.29E-30 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VEA_002495 cffce8fd33fae2577559ee6cff8f3abc 554 Hamap MF_00071 Elongation factor 4 [lepA]. 1 554 281.77 T 13-10-2018 IPR006297 Elongation factor 4 GO:0005525 VEA_002495 cffce8fd33fae2577559ee6cff8f3abc 554 SUPERFAMILY SSF54980 356 450 1.25E-24 T 13-10-2018 IPR035647 EF-G domain III/V-like VEA_002495 cffce8fd33fae2577559ee6cff8f3abc 554 Pfam PF00009 Elongation factor Tu GTP binding domain 1 138 4.4E-35 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_002495 cffce8fd33fae2577559ee6cff8f3abc 554 Gene3D G3DSA:3.30.70.2570 436 510 4.8E-33 T 13-10-2018 IPR038363 LepA, C-terminal domain superfamily VEA_002495 cffce8fd33fae2577559ee6cff8f3abc 554 Gene3D G3DSA:3.40.50.300 1 142 5.4E-51 T 13-10-2018 VEA_002495 cffce8fd33fae2577559ee6cff8f3abc 554 SUPERFAMILY SSF54980 249 327 1.62E-18 T 13-10-2018 IPR035647 EF-G domain III/V-like VEA_002124 ea04854029e372befa3ef21ca4fa431d 407 SUPERFAMILY SSF109604 185 404 2.26E-41 T 13-10-2018 VEA_002124 ea04854029e372befa3ef21ca4fa431d 407 Pfam PF00563 EAL domain 71 194 1.3E-14 T 13-10-2018 IPR001633 EAL domain VEA_002124 ea04854029e372befa3ef21ca4fa431d 407 Gene3D G3DSA:1.10.3210.10 197 365 3.2E-23 T 13-10-2018 VEA_002124 ea04854029e372befa3ef21ca4fa431d 407 SUPERFAMILY SSF141868 4 197 3.4E-28 T 13-10-2018 IPR035919 EAL domain superfamily VEA_002124 ea04854029e372befa3ef21ca4fa431d 407 Pfam PF08668 HDOD domain 208 324 6.8E-13 T 13-10-2018 IPR013976 Metal-dependent hydrolase HDOD VEA_002124 ea04854029e372befa3ef21ca4fa431d 407 SMART SM00052 2 199 2.5E-4 T 13-10-2018 IPR001633 EAL domain VEA_002124 ea04854029e372befa3ef21ca4fa431d 407 Gene3D G3DSA:3.20.20.450 59 196 9.6E-18 T 13-10-2018 IPR035919 EAL domain superfamily VEA_002124 ea04854029e372befa3ef21ca4fa431d 407 PIRSF PIRSF003180 1 407 8.1E-172 T 13-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing VEA_004355 824e779c00a993093024f77c188e9109 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 13-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 VEA_004355 824e779c00a993093024f77c188e9109 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 1.0E-60 T 13-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 VEA_004355 824e779c00a993093024f77c188e9109 112 SUPERFAMILY SSF54292 5 107 4.02E-32 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VEA_004355 824e779c00a993093024f77c188e9109 112 PRINTS PR00355 Adrenodoxin signature 42 52 3.0E-10 T 13-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 VEA_004355 824e779c00a993093024f77c188e9109 112 PRINTS PR00355 Adrenodoxin signature 83 91 3.0E-10 T 13-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 VEA_004355 824e779c00a993093024f77c188e9109 112 PRINTS PR00355 Adrenodoxin signature 60 74 3.0E-10 T 13-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 VEA_004355 824e779c00a993093024f77c188e9109 112 Gene3D G3DSA:3.10.20.30 1 112 2.4E-36 T 13-10-2018 IPR012675 Beta-grasp domain superfamily VEA_004355 824e779c00a993093024f77c188e9109 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 91 4.5E-15 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VEA_000061 430396d21f76d2bb1000fa8690488aa6 560 Pfam PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase 355 427 6.8E-7 T 13-10-2018 IPR018905 Alpha-galactosidase, NEW3 domain VEA_000061 430396d21f76d2bb1000fa8690488aa6 560 Gene3D G3DSA:2.60.40.10 337 448 8.9E-6 T 13-10-2018 IPR013783 Immunoglobulin-like fold VEA_000061 430396d21f76d2bb1000fa8690488aa6 560 SUPERFAMILY SSF55486 24 159 2.78E-14 T 13-10-2018 VEA_000061 430396d21f76d2bb1000fa8690488aa6 560 Gene3D G3DSA:3.40.390.10 25 161 7.0E-6 T 13-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 VEA_000061 430396d21f76d2bb1000fa8690488aa6 560 Pfam PF05548 Gametolysin peptidase M11 61 233 2.4E-6 T 13-10-2018 IPR008752 Peptidase M11, gametolysin VEA_002549 4e34f3a36ae3073e66627d08c37a5db5 255 Gene3D G3DSA:1.10.10.10 1 74 2.4E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_002549 4e34f3a36ae3073e66627d08c37a5db5 255 SUPERFAMILY SSF46785 5 76 2.69E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_002549 4e34f3a36ae3073e66627d08c37a5db5 255 SMART SM00345 15 74 1.8E-27 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_002549 4e34f3a36ae3073e66627d08c37a5db5 255 Pfam PF07729 FCD domain 99 226 4.3E-18 T 13-10-2018 IPR011711 GntR, C-terminal VEA_002549 4e34f3a36ae3073e66627d08c37a5db5 255 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 5.3E-25 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_002549 4e34f3a36ae3073e66627d08c37a5db5 255 SUPERFAMILY SSF48008 98 235 3.14E-20 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VEA_002549 4e34f3a36ae3073e66627d08c37a5db5 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.8E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_002549 4e34f3a36ae3073e66627d08c37a5db5 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.8E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_002549 4e34f3a36ae3073e66627d08c37a5db5 255 SMART SM00895 99 227 8.8E-18 T 13-10-2018 IPR011711 GntR, C-terminal VEA_002549 4e34f3a36ae3073e66627d08c37a5db5 255 Gene3D G3DSA:1.20.120.530 97 236 1.2E-26 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VEA_001926 365f32ecd853377641dc7d256825ec2c 211 Gene3D G3DSA:3.30.1050.10 7 117 6.2E-5 T 13-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VEA_001926 365f32ecd853377641dc7d256825ec2c 211 SUPERFAMILY SSF55718 15 117 9.89E-10 T 13-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VEA_001926 365f32ecd853377641dc7d256825ec2c 211 Pfam PF02036 SCP-2 sterol transfer family 15 111 8.3E-23 T 13-10-2018 IPR003033 SCP2 sterol-binding domain VEA_003018 c297af524b34662d61cb6926e9ea1fb9 353 SUPERFAMILY SSF52096 103 303 3.32E-29 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEA_003018 c297af524b34662d61cb6926e9ea1fb9 353 Pfam PF01343 Peptidase family S49 166 314 4.6E-47 T 13-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 VEA_003018 c297af524b34662d61cb6926e9ea1fb9 353 Pfam PF08496 Peptidase family S49 N-terminal 2 162 4.0E-56 T 13-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 VEA_003018 c297af524b34662d61cb6926e9ea1fb9 353 Gene3D G3DSA:3.40.1750.20 206 270 6.4E-45 T 13-10-2018 VEA_003018 c297af524b34662d61cb6926e9ea1fb9 353 Gene3D G3DSA:3.90.226.10 109 306 6.4E-45 T 13-10-2018 VEA_000795 0781234ffd74f1a91903ade7c70c0b17 514 Gene3D G3DSA:3.40.50.620 8 230 3.1E-102 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_000795 0781234ffd74f1a91903ade7c70c0b17 514 Gene3D G3DSA:1.10.579.10 327 447 1.5E-54 T 13-10-2018 VEA_000795 0781234ffd74f1a91903ade7c70c0b17 514 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 7 223 3.0E-69 T 13-10-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein VEA_000795 0781234ffd74f1a91903ade7c70c0b17 514 Gene3D G3DSA:1.10.10.1710 448 513 1.6E-24 T 13-10-2018 VEA_000795 0781234ffd74f1a91903ade7c70c0b17 514 Gene3D G3DSA:1.25.40.80 132 323 3.1E-102 T 13-10-2018 VEA_000795 0781234ffd74f1a91903ade7c70c0b17 514 SUPERFAMILY SSF48173 229 500 2.22E-63 T 13-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 VEA_000506 eff777fab2969119b31a5447a6b371fc 412 TIGRFAM TIGR01882 peptidase-T: peptidase T 3 406 1.2E-162 T 13-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 VEA_000506 eff777fab2969119b31a5447a6b371fc 412 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 13-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VEA_000506 eff777fab2969119b31a5447a6b371fc 412 SUPERFAMILY SSF55031 209 320 8.72E-40 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VEA_000506 eff777fab2969119b31a5447a6b371fc 412 Gene3D G3DSA:3.40.630.10 4 400 2.2E-173 T 13-10-2018 VEA_000506 eff777fab2969119b31a5447a6b371fc 412 Pfam PF01546 Peptidase family M20/M25/M40 139 401 5.7E-12 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 VEA_000506 eff777fab2969119b31a5447a6b371fc 412 SUPERFAMILY SSF53187 1 406 4.53E-81 T 13-10-2018 VEA_000506 eff777fab2969119b31a5447a6b371fc 412 Hamap MF_00550 Peptidase T [pepT]. 1 404 57.655 T 13-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 VEA_000506 eff777fab2969119b31a5447a6b371fc 412 Pfam PF07687 Peptidase dimerisation domain 206 301 3.7E-9 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain VEA_000506 eff777fab2969119b31a5447a6b371fc 412 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 177 - T 13-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VEA_000506 eff777fab2969119b31a5447a6b371fc 412 PIRSF PIRSF037215 1 408 1.2E-182 T 13-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 VEA_000506 eff777fab2969119b31a5447a6b371fc 412 Gene3D G3DSA:3.30.70.360 209 319 2.2E-173 T 13-10-2018 VEA_000844 cee47e7a037318e0d5c151a0ec6c3c88 206 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 127 204 9.1E-21 T 13-10-2018 IPR037682 TonB, C-terminal GO:0055085 VEA_000844 cee47e7a037318e0d5c151a0ec6c3c88 206 SUPERFAMILY SSF74653 118 196 1.96E-24 T 13-10-2018 VEA_000844 cee47e7a037318e0d5c151a0ec6c3c88 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 142 160 6.6E-18 T 13-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VEA_000844 cee47e7a037318e0d5c151a0ec6c3c88 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 63 73 6.6E-18 T 13-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VEA_000844 cee47e7a037318e0d5c151a0ec6c3c88 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 121 142 6.6E-18 T 13-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VEA_000844 cee47e7a037318e0d5c151a0ec6c3c88 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 161 178 6.6E-18 T 13-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VEA_000844 cee47e7a037318e0d5c151a0ec6c3c88 206 Gene3D G3DSA:3.30.1150.10 104 206 6.1E-28 T 13-10-2018 VEA_000844 cee47e7a037318e0d5c151a0ec6c3c88 206 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 127 204 4.4E-18 T 13-10-2018 IPR006260 TonB/TolA, C-terminal VEA_001774 9847e89b75033757a07c1a5d645d3cae 441 SUPERFAMILY SSF56281 1 436 2.36E-125 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEA_001774 9847e89b75033757a07c1a5d645d3cae 441 Gene3D G3DSA:3.60.15.10 6 427 1.4E-137 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEA_001774 9847e89b75033757a07c1a5d645d3cae 441 Pfam PF00753 Metallo-beta-lactamase superfamily 14 190 2.1E-13 T 13-10-2018 IPR001279 Metallo-beta-lactamase VEA_001774 9847e89b75033757a07c1a5d645d3cae 441 Gene3D G3DSA:3.40.50.10890 204 392 1.4E-137 T 13-10-2018 VEA_001774 9847e89b75033757a07c1a5d645d3cae 441 SMART SM00849 13 216 8.1E-18 T 13-10-2018 IPR001279 Metallo-beta-lactamase VEA_001774 9847e89b75033757a07c1a5d645d3cae 441 Pfam PF10996 Beta-Casp domain 236 366 7.2E-29 T 13-10-2018 IPR022712 Beta-Casp domain VEA_001774 9847e89b75033757a07c1a5d645d3cae 441 SMART SM01027 236 366 4.2E-56 T 13-10-2018 IPR022712 Beta-Casp domain VEA_001774 9847e89b75033757a07c1a5d645d3cae 441 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 380 439 1.1E-15 T 13-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain VEA_003087 5d495034f6c1da0e5369cca344e0a4b2 202 Pfam PF00117 Glutamine amidotransferase class-I 6 186 2.7E-46 T 13-10-2018 IPR017926 Glutamine amidotransferase VEA_003087 5d495034f6c1da0e5369cca344e0a4b2 202 SUPERFAMILY SSF52317 2 192 1.23E-46 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VEA_003087 5d495034f6c1da0e5369cca344e0a4b2 202 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 188 6.6E-53 T 13-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VEA_003087 5d495034f6c1da0e5369cca344e0a4b2 202 Gene3D G3DSA:3.40.50.880 1 193 1.3E-57 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VEA_003087 5d495034f6c1da0e5369cca344e0a4b2 202 PRINTS PR00097 Anthranilate synthase component II signature 79 90 2.1E-34 T 13-10-2018 VEA_003087 5d495034f6c1da0e5369cca344e0a4b2 202 PRINTS PR00097 Anthranilate synthase component II signature 166 179 2.1E-34 T 13-10-2018 VEA_003087 5d495034f6c1da0e5369cca344e0a4b2 202 PRINTS PR00097 Anthranilate synthase component II signature 4 18 2.1E-34 T 13-10-2018 VEA_003087 5d495034f6c1da0e5369cca344e0a4b2 202 PRINTS PR00097 Anthranilate synthase component II signature 104 112 2.1E-34 T 13-10-2018 VEA_003087 5d495034f6c1da0e5369cca344e0a4b2 202 PRINTS PR00097 Anthranilate synthase component II signature 124 136 2.1E-34 T 13-10-2018 VEA_003087 5d495034f6c1da0e5369cca344e0a4b2 202 PRINTS PR00097 Anthranilate synthase component II signature 52 61 2.1E-34 T 13-10-2018 VEA_003087 5d495034f6c1da0e5369cca344e0a4b2 202 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 1.3E-5 T 13-10-2018 VEA_003087 5d495034f6c1da0e5369cca344e0a4b2 202 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 1.3E-5 T 13-10-2018 VEA_003087 5d495034f6c1da0e5369cca344e0a4b2 202 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 2.2E-13 T 13-10-2018 VEA_003087 5d495034f6c1da0e5369cca344e0a4b2 202 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 2.2E-13 T 13-10-2018 VEA_003087 5d495034f6c1da0e5369cca344e0a4b2 202 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 2.2E-13 T 13-10-2018 VEA_001723 0f1e8baca098fab2e799150fe28fa0c9 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 13-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001723 0f1e8baca098fab2e799150fe28fa0c9 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.069 T 13-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 VEA_001723 0f1e8baca098fab2e799150fe28fa0c9 144 Gene3D G3DSA:3.100.10.10 70 144 2.7E-13 T 13-10-2018 VEA_001723 0f1e8baca098fab2e799150fe28fa0c9 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 3.5E-50 T 13-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001723 0f1e8baca098fab2e799150fe28fa0c9 144 SUPERFAMILY SSF52080 4 143 1.83E-46 T 13-10-2018 IPR036227 Ribosomal L18e/L15P superfamily VEA_001723 0f1e8baca098fab2e799150fe28fa0c9 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 2.0E-31 T 13-10-2018 IPR021131 Ribosomal protein L18e/L15P VEA_003375 717468d636719b94e6a81d14cfb141e3 604 Pfam PF04792 V antigen (LcrV) protein 405 604 4.0E-31 T 13-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 VEA_003375 717468d636719b94e6a81d14cfb141e3 604 PRINTS PR01592 Low calcium response V antigen signature 579 601 4.7E-12 T 13-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 VEA_003375 717468d636719b94e6a81d14cfb141e3 604 PRINTS PR01592 Low calcium response V antigen signature 451 473 4.7E-12 T 13-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 VEA_003375 717468d636719b94e6a81d14cfb141e3 604 SUPERFAMILY SSF103388 348 603 2.48E-85 T 13-10-2018 IPR036139 Virulence-associated V antigen superfamily GO:0005576|GO:0009405 VEA_002856 42862426bbc65376a12cd6b157e0ae67 435 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 1 435 65.133 T 13-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 VEA_002856 42862426bbc65376a12cd6b157e0ae67 435 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 16 433 1.2E-125 T 13-10-2018 IPR002155 Thiolase GO:0016747 VEA_002856 42862426bbc65376a12cd6b157e0ae67 435 Pfam PF00108 Thiolase, N-terminal domain 14 286 1.6E-62 T 13-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 VEA_002856 42862426bbc65376a12cd6b157e0ae67 435 Gene3D G3DSA:3.40.47.10 4 434 9.5E-110 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VEA_002856 42862426bbc65376a12cd6b157e0ae67 435 SUPERFAMILY SSF53901 296 434 1.33E-30 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VEA_002856 42862426bbc65376a12cd6b157e0ae67 435 PIRSF PIRSF000429 8 435 7.8E-119 T 13-10-2018 IPR002155 Thiolase GO:0016747 VEA_002856 42862426bbc65376a12cd6b157e0ae67 435 Pfam PF02803 Thiolase, C-terminal domain 295 433 8.1E-36 T 13-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 VEA_002856 42862426bbc65376a12cd6b157e0ae67 435 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 6 435 1.5E-266 T 13-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 VEA_002856 42862426bbc65376a12cd6b157e0ae67 435 SUPERFAMILY SSF53901 14 293 5.26E-60 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VEA_002856 42862426bbc65376a12cd6b157e0ae67 435 ProSitePatterns PS00737 Thiolases signature 2. 381 397 - T 13-10-2018 IPR020613 Thiolase, conserved site GO:0016747 VEA_001137 4cff2a7a59ae17b6e9743e1dab6fa898 72 Gene3D G3DSA:1.10.720.30 14 71 3.7E-30 T 13-10-2018 IPR036361 SAP domain superfamily VEA_001137 4cff2a7a59ae17b6e9743e1dab6fa898 72 Pfam PF09905 DNA-binding protein VF530 6 68 9.3E-35 T 13-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 VEA_003141 da752453523f8487a0fc2b2453a19df2 629 Gene3D G3DSA:3.10.580.10 145 283 1.0E-30 T 13-10-2018 VEA_003141 da752453523f8487a0fc2b2453a19df2 629 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 479 622 5.5E-46 T 13-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding VEA_003141 da752453523f8487a0fc2b2453a19df2 629 SUPERFAMILY SSF54631 146 279 6.1E-26 T 13-10-2018 VEA_003141 da752453523f8487a0fc2b2453a19df2 629 Gene3D G3DSA:2.60.120.10 1 144 5.2E-25 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VEA_003141 da752453523f8487a0fc2b2453a19df2 629 Pfam PF00027 Cyclic nucleotide-binding domain 37 118 2.1E-14 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain VEA_003141 da752453523f8487a0fc2b2453a19df2 629 Pfam PF00571 CBS domain 156 214 4.2E-7 T 13-10-2018 IPR000644 CBS domain VEA_003141 da752453523f8487a0fc2b2453a19df2 629 Pfam PF00571 CBS domain 226 278 2.9E-9 T 13-10-2018 IPR000644 CBS domain VEA_003141 da752453523f8487a0fc2b2453a19df2 629 SUPERFAMILY SSF51206 7 135 4.98E-29 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like VEA_003141 da752453523f8487a0fc2b2453a19df2 629 SMART SM00100 17 134 2.1E-8 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain VEA_003141 da752453523f8487a0fc2b2453a19df2 629 SMART SM00116 159 216 0.023 T 13-10-2018 IPR000644 CBS domain VEA_003141 da752453523f8487a0fc2b2453a19df2 629 SMART SM00116 233 280 8.7E-5 T 13-10-2018 IPR000644 CBS domain VEA_003141 da752453523f8487a0fc2b2453a19df2 629 Pfam PF03445 Putative nucleotidyltransferase DUF294 305 442 1.6E-46 T 13-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 VEA_000135 7ed6a0fcd8bfee07049bf9f14112dbdb 279 Gene3D G3DSA:3.40.190.10 92 197 1.6E-15 T 13-10-2018 VEA_000135 7ed6a0fcd8bfee07049bf9f14112dbdb 279 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.3E-17 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000135 7ed6a0fcd8bfee07049bf9f14112dbdb 279 Gene3D G3DSA:1.10.10.10 4 89 2.5E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000135 7ed6a0fcd8bfee07049bf9f14112dbdb 279 SUPERFAMILY SSF46785 6 87 5.97E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000135 7ed6a0fcd8bfee07049bf9f14112dbdb 279 SUPERFAMILY SSF53850 92 273 9.95E-20 T 13-10-2018 VEA_000135 7ed6a0fcd8bfee07049bf9f14112dbdb 279 Pfam PF03466 LysR substrate binding domain 92 167 5.2E-12 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_003700 3394bc5f16f7ffb8a590378ac370d8f2 391 Pfam PF01370 NAD dependent epimerase/dehydratase family 17 79 1.8E-4 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VEA_003700 3394bc5f16f7ffb8a590378ac370d8f2 391 SUPERFAMILY SSF56059 111 313 1.63E-57 T 13-10-2018 VEA_003700 3394bc5f16f7ffb8a590378ac370d8f2 391 SUPERFAMILY SSF52440 2 110 3.02E-34 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VEA_003700 3394bc5f16f7ffb8a590378ac370d8f2 391 Gene3D G3DSA:3.30.470.20 195 389 5.0E-61 T 13-10-2018 VEA_003700 3394bc5f16f7ffb8a590378ac370d8f2 391 Pfam PF02222 ATP-grasp domain 121 293 3.3E-58 T 13-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type VEA_003700 3394bc5f16f7ffb8a590378ac370d8f2 391 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 12 389 9.3E-193 T 13-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 VEA_003700 3394bc5f16f7ffb8a590378ac370d8f2 391 Gene3D G3DSA:3.40.50.20 1 120 1.2E-53 T 13-10-2018 VEA_003700 3394bc5f16f7ffb8a590378ac370d8f2 391 Gene3D G3DSA:3.30.1490.20 121 194 2.1E-34 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VEA_003700 3394bc5f16f7ffb8a590378ac370d8f2 391 SUPERFAMILY SSF51246 317 389 7.38E-19 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 VEA_003700 3394bc5f16f7ffb8a590378ac370d8f2 391 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 6 390 52.219 T 13-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 VEA_004485 b1f356f53c3efea317d5d5e8fc9557e5 305 Gene3D G3DSA:3.30.1700.10 129 305 5.4E-71 T 13-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 VEA_004485 b1f356f53c3efea317d5d5e8fc9557e5 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 3.6E-109 T 13-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 VEA_004485 b1f356f53c3efea317d5d5e8fc9557e5 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 298 2.0E-142 T 13-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 VEA_004485 b1f356f53c3efea317d5d5e8fc9557e5 305 SUPERFAMILY SSF54211 134 278 4.78E-53 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEA_004485 b1f356f53c3efea317d5d5e8fc9557e5 305 Gene3D G3DSA:3.30.230.20 1 128 7.7E-52 T 13-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 VEA_004485 b1f356f53c3efea317d5d5e8fc9557e5 305 SUPERFAMILY SSF54211 3 126 1.21E-42 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEA_004485 b1f356f53c3efea317d5d5e8fc9557e5 305 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 46.964 T 13-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 VEA_004466 dda261e2d288c49b4a79cfdd82276a06 1516 Gene3D G3DSA:3.20.20.70 448 815 0.0 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_004466 dda261e2d288c49b4a79cfdd82276a06 1516 Pfam PF01645 Conserved region in glutamate synthase 817 1187 5.7E-151 T 13-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 VEA_004466 dda261e2d288c49b4a79cfdd82276a06 1516 Gene3D G3DSA:3.20.20.70 498 1204 0.0 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_004466 dda261e2d288c49b4a79cfdd82276a06 1516 Pfam PF01493 GXGXG motif 1267 1452 1.5E-83 T 13-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 VEA_004466 dda261e2d288c49b4a79cfdd82276a06 1516 Gene3D G3DSA:2.160.20.60 1239 1510 1.6E-109 T 13-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 VEA_004466 dda261e2d288c49b4a79cfdd82276a06 1516 Gene3D G3DSA:3.60.20.10 21 560 0.0 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VEA_004466 dda261e2d288c49b4a79cfdd82276a06 1516 SUPERFAMILY SSF56235 21 447 1.47E-152 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VEA_004466 dda261e2d288c49b4a79cfdd82276a06 1516 Pfam PF00310 Glutamine amidotransferases class-II 21 443 1.2E-184 T 13-10-2018 IPR017932 Glutamine amidotransferase type 2 domain VEA_004466 dda261e2d288c49b4a79cfdd82276a06 1516 SUPERFAMILY SSF51395 452 1221 2.52E-268 T 13-10-2018 VEA_004466 dda261e2d288c49b4a79cfdd82276a06 1516 SUPERFAMILY SSF69336 1235 1498 3.53E-95 T 13-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 VEA_004466 dda261e2d288c49b4a79cfdd82276a06 1516 Pfam PF04898 Glutamate synthase central domain 472 756 4.4E-117 T 13-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 VEA_001940 f31dcf7ecadcf9913d0880d53fea35a7 58 PIRSF PIRSF036466 1 55 1.5E-20 T 13-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 VEA_001940 f31dcf7ecadcf9913d0880d53fea35a7 58 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 48 16.753 T 13-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 VEA_001940 f31dcf7ecadcf9913d0880d53fea35a7 58 Pfam PF07043 Protein of unknown function (DUF1328) 7 44 6.6E-12 T 13-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 VEA_003416 8b703944b31f9ca6a79249fbe4603a85 401 SUPERFAMILY SSF161098 91 160 7.19E-12 T 13-10-2018 IPR035906 MetI-like superfamily VEA_003416 8b703944b31f9ca6a79249fbe4603a85 401 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 396 4.6E-12 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_003416 8b703944b31f9ca6a79249fbe4603a85 401 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 92 155 5.9E-17 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VEA_003416 8b703944b31f9ca6a79249fbe4603a85 401 SUPERFAMILY SSF161098 194 382 5.49E-24 T 13-10-2018 IPR035906 MetI-like superfamily VEA_003416 8b703944b31f9ca6a79249fbe4603a85 401 Gene3D G3DSA:1.10.3720.10 79 181 1.8E-14 T 13-10-2018 IPR035906 MetI-like superfamily VEA_003416 8b703944b31f9ca6a79249fbe4603a85 401 Gene3D G3DSA:1.10.3720.10 191 397 1.5E-32 T 13-10-2018 IPR035906 MetI-like superfamily VEA_000072 c9f931bb42b0c7b0eead785b2a393aff 252 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 16 30 - T 13-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VEA_000072 c9f931bb42b0c7b0eead785b2a393aff 252 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 11 244 1.2E-93 T 13-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VEA_000072 c9f931bb42b0c7b0eead785b2a393aff 252 Gene3D G3DSA:3.30.950.10 127 252 7.8E-44 T 13-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 VEA_000072 c9f931bb42b0c7b0eead785b2a393aff 252 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 14 222 1.2E-48 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 VEA_000072 c9f931bb42b0c7b0eead785b2a393aff 252 Gene3D G3DSA:3.40.1010.10 10 126 1.2E-44 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 VEA_000072 c9f931bb42b0c7b0eead785b2a393aff 252 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 91 124 - T 13-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VEA_000072 c9f931bb42b0c7b0eead785b2a393aff 252 SUPERFAMILY SSF53790 7 250 4.58E-79 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 VEA_001160 821d6855ca295dd6298bac612331050e 181 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 54 1.1E-12 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEA_001160 821d6855ca295dd6298bac612331050e 181 Gene3D G3DSA:1.10.357.10 1 181 4.8E-47 T 13-10-2018 VEA_001160 821d6855ca295dd6298bac612331050e 181 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 2.9E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEA_001160 821d6855ca295dd6298bac612331050e 181 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 2.9E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEA_001160 821d6855ca295dd6298bac612331050e 181 SUPERFAMILY SSF46689 2 69 2.14E-16 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_001160 821d6855ca295dd6298bac612331050e 181 SUPERFAMILY SSF48498 89 165 8.9E-8 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VEA_002619 bc25bb73cdee1ccbca5f5522f76ec57b 679 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 120 3.1E-8 T 13-10-2018 IPR000014 PAS domain VEA_002619 bc25bb73cdee1ccbca5f5522f76ec57b 679 SUPERFAMILY SSF55073 258 412 2.75E-45 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_002619 bc25bb73cdee1ccbca5f5522f76ec57b 679 SUPERFAMILY SSF141868 427 674 1.96E-84 T 13-10-2018 IPR035919 EAL domain superfamily VEA_002619 bc25bb73cdee1ccbca5f5522f76ec57b 679 Gene3D G3DSA:3.30.70.270 250 422 3.9E-49 T 13-10-2018 VEA_002619 bc25bb73cdee1ccbca5f5522f76ec57b 679 SMART SM00052 420 666 7.4E-108 T 13-10-2018 IPR001633 EAL domain VEA_002619 bc25bb73cdee1ccbca5f5522f76ec57b 679 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 255 407 1.6E-36 T 13-10-2018 IPR000160 GGDEF domain VEA_002619 bc25bb73cdee1ccbca5f5522f76ec57b 679 SMART SM00091 8 74 0.0011 T 13-10-2018 IPR000014 PAS domain VEA_002619 bc25bb73cdee1ccbca5f5522f76ec57b 679 SMART SM00091 131 198 0.022 T 13-10-2018 IPR000014 PAS domain VEA_002619 bc25bb73cdee1ccbca5f5522f76ec57b 679 SUPERFAMILY SSF55785 115 211 6.98E-9 T 13-10-2018 IPR035965 PAS domain superfamily VEA_002619 bc25bb73cdee1ccbca5f5522f76ec57b 679 Pfam PF13188 PAS domain 133 179 9.1E-5 T 13-10-2018 IPR000014 PAS domain VEA_002619 bc25bb73cdee1ccbca5f5522f76ec57b 679 Gene3D G3DSA:3.20.20.450 423 675 5.1E-95 T 13-10-2018 IPR035919 EAL domain superfamily VEA_002619 bc25bb73cdee1ccbca5f5522f76ec57b 679 Pfam PF00563 EAL domain 427 661 6.6E-73 T 13-10-2018 IPR001633 EAL domain VEA_002619 bc25bb73cdee1ccbca5f5522f76ec57b 679 Gene3D G3DSA:3.30.450.20 3 127 4.8E-12 T 13-10-2018 VEA_002619 bc25bb73cdee1ccbca5f5522f76ec57b 679 Gene3D G3DSA:3.30.450.20 128 237 3.1E-7 T 13-10-2018 VEA_002619 bc25bb73cdee1ccbca5f5522f76ec57b 679 SUPERFAMILY SSF55785 5 115 2.51E-10 T 13-10-2018 IPR035965 PAS domain superfamily VEA_002619 bc25bb73cdee1ccbca5f5522f76ec57b 679 Pfam PF08448 PAS fold 15 119 7.1E-7 T 13-10-2018 IPR013656 PAS fold-4 VEA_002619 bc25bb73cdee1ccbca5f5522f76ec57b 679 SMART SM00267 246 410 1.4E-52 T 13-10-2018 IPR000160 GGDEF domain VEA_002619 bc25bb73cdee1ccbca5f5522f76ec57b 679 Pfam PF00990 Diguanylate cyclase, GGDEF domain 254 406 2.5E-42 T 13-10-2018 IPR000160 GGDEF domain VEA_002125 7fabbeb18375edcdf13cde62e2db9bb5 111 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 29 47 - T 13-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 VEA_002125 7fabbeb18375edcdf13cde62e2db9bb5 111 Gene3D G3DSA:1.10.10.10 4 100 1.8E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_002125 7fabbeb18375edcdf13cde62e2db9bb5 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 1.9E-19 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEA_002125 7fabbeb18375edcdf13cde62e2db9bb5 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 1.9E-19 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEA_002125 7fabbeb18375edcdf13cde62e2db9bb5 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 1.9E-19 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEA_002125 7fabbeb18375edcdf13cde62e2db9bb5 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 1.9E-19 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEA_002125 7fabbeb18375edcdf13cde62e2db9bb5 111 SUPERFAMILY SSF46785 5 85 3.06E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_002125 7fabbeb18375edcdf13cde62e2db9bb5 111 Pfam PF01022 Bacterial regulatory protein, arsR family 12 57 1.2E-13 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEA_002125 7fabbeb18375edcdf13cde62e2db9bb5 111 SMART SM00418 5 83 1.2E-24 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEA_001083 c4f53830bdeb24b4c68291855489649b 656 Gene3D G3DSA:2.60.40.10 5 115 1.9E-19 T 13-10-2018 IPR013783 Immunoglobulin-like fold VEA_001083 c4f53830bdeb24b4c68291855489649b 656 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 7 647 6.0E-203 T 13-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 VEA_001083 c4f53830bdeb24b4c68291855489649b 656 Gene3D G3DSA:2.60.40.1180 555 648 2.4E-6 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta VEA_001083 c4f53830bdeb24b4c68291855489649b 656 Pfam PF00128 Alpha amylase, catalytic domain 199 253 1.8E-5 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VEA_001083 c4f53830bdeb24b4c68291855489649b 656 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 10 87 1.5E-9 T 13-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 VEA_001083 c4f53830bdeb24b4c68291855489649b 656 SUPERFAMILY SSF51011 556 648 7.19E-13 T 13-10-2018 VEA_001083 c4f53830bdeb24b4c68291855489649b 656 Gene3D G3DSA:3.20.20.80 116 551 6.1E-142 T 13-10-2018 VEA_001083 c4f53830bdeb24b4c68291855489649b 656 SUPERFAMILY SSF81296 7 124 1.68E-20 T 13-10-2018 IPR014756 Immunoglobulin E-set VEA_001083 c4f53830bdeb24b4c68291855489649b 656 SUPERFAMILY SSF51445 112 542 1.29E-96 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VEA_001083 c4f53830bdeb24b4c68291855489649b 656 SMART SM00642 145 539 1.3E-4 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VEA_003864 12c616d0638199478df48c26f71c6e53 241 Pfam PF00106 short chain dehydrogenase 3 183 4.9E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_003864 12c616d0638199478df48c26f71c6e53 241 Gene3D G3DSA:3.40.50.720 1 238 5.6E-47 T 13-10-2018 VEA_003864 12c616d0638199478df48c26f71c6e53 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 180 2.1E-15 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_003864 12c616d0638199478df48c26f71c6e53 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 161 2.1E-15 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_003864 12c616d0638199478df48c26f71c6e53 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.1E-15 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_003864 12c616d0638199478df48c26f71c6e53 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 129 157 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VEA_003864 12c616d0638199478df48c26f71c6e53 241 SUPERFAMILY SSF51735 3 236 2.65E-47 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_004453 8113755e23acdc884c82fc5c6d373b8f 125 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 125 41.663 T 13-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA VEA_004453 8113755e23acdc884c82fc5c6d373b8f 125 Pfam PF01228 Glycine radical 16 106 3.8E-23 T 13-10-2018 IPR001150 Glycine radical domain GO:0003824 VEA_004453 8113755e23acdc884c82fc5c6d373b8f 125 PIRSF PIRSF000378 2 125 6.7E-54 T 13-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA VEA_004453 8113755e23acdc884c82fc5c6d373b8f 125 Gene3D G3DSA:3.20.70.20 14 125 1.1E-25 T 13-10-2018 VEA_004453 8113755e23acdc884c82fc5c6d373b8f 125 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 125 1.1E-68 T 13-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA VEA_004453 8113755e23acdc884c82fc5c6d373b8f 125 ProSitePatterns PS00850 Glycine radical domain signature. 95 103 - T 13-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VEA_004453 8113755e23acdc884c82fc5c6d373b8f 125 SUPERFAMILY SSF51998 64 124 9.61E-24 T 13-10-2018 VEA_003848 121cf305e050755fa1186cd2be01ac36 430 Gene3D G3DSA:3.40.50.1980 30 229 7.5E-127 T 13-10-2018 VEA_003848 121cf305e050755fa1186cd2be01ac36 430 Gene3D G3DSA:3.40.50.1980 231 346 7.5E-127 T 13-10-2018 VEA_003848 121cf305e050755fa1186cd2be01ac36 430 PRINTS PR00083 Histidinol dehydrogenase signature 227 248 3.1E-103 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VEA_003848 121cf305e050755fa1186cd2be01ac36 430 PRINTS PR00083 Histidinol dehydrogenase signature 165 191 3.1E-103 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VEA_003848 121cf305e050755fa1186cd2be01ac36 430 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 3.1E-103 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VEA_003848 121cf305e050755fa1186cd2be01ac36 430 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 3.1E-103 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VEA_003848 121cf305e050755fa1186cd2be01ac36 430 PRINTS PR00083 Histidinol dehydrogenase signature 358 376 3.1E-103 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VEA_003848 121cf305e050755fa1186cd2be01ac36 430 PRINTS PR00083 Histidinol dehydrogenase signature 195 220 3.1E-103 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VEA_003848 121cf305e050755fa1186cd2be01ac36 430 PRINTS PR00083 Histidinol dehydrogenase signature 317 342 3.1E-103 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VEA_003848 121cf305e050755fa1186cd2be01ac36 430 PRINTS PR00083 Histidinol dehydrogenase signature 249 268 3.1E-103 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VEA_003848 121cf305e050755fa1186cd2be01ac36 430 Pfam PF00815 Histidinol dehydrogenase 27 424 4.4E-172 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VEA_003848 121cf305e050755fa1186cd2be01ac36 430 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 227 259 - T 13-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 VEA_003848 121cf305e050755fa1186cd2be01ac36 430 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 423 2.0E-167 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VEA_003848 121cf305e050755fa1186cd2be01ac36 430 SUPERFAMILY SSF53720 4 424 3.92E-93 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VEA_003848 121cf305e050755fa1186cd2be01ac36 430 PIRSF PIRSF000099 1 427 3.7E-171 T 13-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VEA_003848 121cf305e050755fa1186cd2be01ac36 430 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 424 42.564 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VEA_001736 7703d6b3dfa4abef62e1870fd3fc0451 232 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.529 T 13-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 VEA_001736 7703d6b3dfa4abef62e1870fd3fc0451 232 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.5E-40 T 13-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001736 7703d6b3dfa4abef62e1870fd3fc0451 232 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 13-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001736 7703d6b3dfa4abef62e1870fd3fc0451 232 SUPERFAMILY SSF54814 2 106 3.4E-36 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 VEA_001736 7703d6b3dfa4abef62e1870fd3fc0451 232 SMART SM00322 60 125 7.7E-8 T 13-10-2018 IPR004087 K Homology domain GO:0003676 VEA_001736 7703d6b3dfa4abef62e1870fd3fc0451 232 SUPERFAMILY SSF54821 108 206 1.57E-39 T 13-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001736 7703d6b3dfa4abef62e1870fd3fc0451 232 Gene3D G3DSA:3.30.1140.32 108 208 3.6E-44 T 13-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001736 7703d6b3dfa4abef62e1870fd3fc0451 232 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 9.5E-97 T 13-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 VEA_001736 7703d6b3dfa4abef62e1870fd3fc0451 232 Pfam PF07650 KH domain 38 111 1.5E-18 T 13-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001736 7703d6b3dfa4abef62e1870fd3fc0451 232 Gene3D G3DSA:3.30.300.20 17 107 1.1E-28 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta VEA_003886 a89503e231fc2f0156369d89db2aa364 542 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 326 507 2.5E-41 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_003886 a89503e231fc2f0156369d89db2aa364 542 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 183 5.2E-21 T 13-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VEA_003886 a89503e231fc2f0156369d89db2aa364 542 SUPERFAMILY SSF58104 241 542 9.29E-72 T 13-10-2018 VEA_003886 a89503e231fc2f0156369d89db2aa364 542 Gene3D G3DSA:1.10.287.950 211 542 7.9E-75 T 13-10-2018 VEA_003886 a89503e231fc2f0156369d89db2aa364 542 SMART SM00283 280 541 1.4E-65 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_004455 4c660a1879c73ba5376b6f1cde33d453 426 Gene3D G3DSA:3.90.1380.10 1 79 5.3E-32 T 13-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily VEA_004455 4c660a1879c73ba5376b6f1cde33d453 426 Pfam PF14821 Threonine synthase N terminus 8 78 1.9E-9 T 13-10-2018 IPR029144 Threonine synthase, N-terminal VEA_004455 4c660a1879c73ba5376b6f1cde33d453 426 TIGRFAM TIGR00260 thrC: threonine synthase 51 388 1.1E-113 T 13-10-2018 IPR004450 Threonine synthase-like VEA_004455 4c660a1879c73ba5376b6f1cde33d453 426 Gene3D G3DSA:3.40.50.1100 101 399 7.4E-138 T 13-10-2018 VEA_004455 4c660a1879c73ba5376b6f1cde33d453 426 SUPERFAMILY SSF53686 1 424 1.96E-132 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VEA_004455 4c660a1879c73ba5376b6f1cde33d453 426 Gene3D G3DSA:3.40.50.1100 83 392 7.4E-138 T 13-10-2018 VEA_004455 4c660a1879c73ba5376b6f1cde33d453 426 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 95 109 - T 13-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 VEA_004455 4c660a1879c73ba5376b6f1cde33d453 426 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 89 367 6.1E-23 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VEA_000568 35c643ab23b4a1f3bac5f37a364fe719 212 SMART SM00471 22 139 9.8E-6 T 13-10-2018 IPR003607 HD/PDEase domain VEA_000568 35c643ab23b4a1f3bac5f37a364fe719 212 SUPERFAMILY SSF109604 3 210 4.71E-63 T 13-10-2018 VEA_000568 35c643ab23b4a1f3bac5f37a364fe719 212 Pfam PF01966 HD domain 27 129 1.4E-13 T 13-10-2018 IPR006674 HD domain VEA_000568 35c643ab23b4a1f3bac5f37a364fe719 212 Gene3D G3DSA:1.10.3210.50 3 212 1.1E-70 T 13-10-2018 VEA_001792 8db094b24b08a40cc3534da5d5f6e560 313 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 241 3.0E-44 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VEA_001792 8db094b24b08a40cc3534da5d5f6e560 313 Gene3D G3DSA:3.40.50.720 3 307 2.1E-115 T 13-10-2018 VEA_001792 8db094b24b08a40cc3534da5d5f6e560 313 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 313 46.286 T 13-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 VEA_001792 8db094b24b08a40cc3534da5d5f6e560 313 Gene3D G3DSA:3.90.25.10 173 295 2.1E-115 T 13-10-2018 VEA_001792 8db094b24b08a40cc3534da5d5f6e560 313 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 309 3.3E-126 T 13-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 VEA_001792 8db094b24b08a40cc3534da5d5f6e560 313 SUPERFAMILY SSF51735 1 308 5.14E-58 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_002894 749ad53e5c622904ac670f8e9fb30776 219 Pfam PF08348 YheO-like PAS domain 14 121 2.1E-34 T 13-10-2018 IPR013559 YheO-like VEA_002894 749ad53e5c622904ac670f8e9fb30776 219 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 15 114 1.0E-52 T 13-10-2018 IPR013559 YheO-like VEA_002894 749ad53e5c622904ac670f8e9fb30776 219 Pfam PF13309 HTH domain 157 214 5.0E-15 T 13-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain VEA_002472 78ddf5b8088fa8cd9f4e095fc75b2ed5 386 SUPERFAMILY SSF53748 3 382 1.65E-144 T 13-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002472 78ddf5b8088fa8cd9f4e095fc75b2ed5 386 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 5.7E-83 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002472 78ddf5b8088fa8cd9f4e095fc75b2ed5 386 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 5.7E-83 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002472 78ddf5b8088fa8cd9f4e095fc75b2ed5 386 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 5.7E-83 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002472 78ddf5b8088fa8cd9f4e095fc75b2ed5 386 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 5.7E-83 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002472 78ddf5b8088fa8cd9f4e095fc75b2ed5 386 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 5.7E-83 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002472 78ddf5b8088fa8cd9f4e095fc75b2ed5 386 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 5.7E-83 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002472 78ddf5b8088fa8cd9f4e095fc75b2ed5 386 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 5.7E-83 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002472 78ddf5b8088fa8cd9f4e095fc75b2ed5 386 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 5.7E-83 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002472 78ddf5b8088fa8cd9f4e095fc75b2ed5 386 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 5.7E-83 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002472 78ddf5b8088fa8cd9f4e095fc75b2ed5 386 Pfam PF00162 Phosphoglycerate kinase 6 373 8.3E-139 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002472 78ddf5b8088fa8cd9f4e095fc75b2ed5 386 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 13-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002472 78ddf5b8088fa8cd9f4e095fc75b2ed5 386 PIRSF PIRSF000724 1 386 1.3E-134 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002472 78ddf5b8088fa8cd9f4e095fc75b2ed5 386 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 38.374 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002472 78ddf5b8088fa8cd9f4e095fc75b2ed5 386 Gene3D G3DSA:3.40.50.1260 10 379 1.3E-151 T 13-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002472 78ddf5b8088fa8cd9f4e095fc75b2ed5 386 Gene3D G3DSA:3.40.50.1260 165 373 1.3E-151 T 13-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_000470 248ea1be18928c0eb9831082bec7e85b 429 SUPERFAMILY SSF56235 227 394 4.71E-20 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VEA_000470 248ea1be18928c0eb9831082bec7e85b 429 Gene3D G3DSA:3.60.60.10 2 208 2.5E-32 T 13-10-2018 VEA_000470 248ea1be18928c0eb9831082bec7e85b 429 Gene3D G3DSA:3.60.60.10 223 409 4.3E-33 T 13-10-2018 VEA_000470 248ea1be18928c0eb9831082bec7e85b 429 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 231 349 8.9E-12 T 13-10-2018 IPR029132 Choloylglycine hydrolase/NAAA C-terminal VEA_000470 248ea1be18928c0eb9831082bec7e85b 429 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 2 203 2.2E-12 T 13-10-2018 IPR029132 Choloylglycine hydrolase/NAAA C-terminal VEA_000470 248ea1be18928c0eb9831082bec7e85b 429 SUPERFAMILY SSF56235 9 202 6.33E-19 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VEA_000412 416b4dae1b0b33afc91023bdab3e4812 235 SUPERFAMILY SSF46785 3 71 6.34E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000412 416b4dae1b0b33afc91023bdab3e4812 235 Gene3D G3DSA:1.10.10.10 1 67 3.2E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000412 416b4dae1b0b33afc91023bdab3e4812 235 Gene3D G3DSA:3.40.1410.10 69 235 8.6E-42 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VEA_000412 416b4dae1b0b33afc91023bdab3e4812 235 SMART SM00345 8 67 5.8E-17 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_000412 416b4dae1b0b33afc91023bdab3e4812 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 9.4E-7 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_000412 416b4dae1b0b33afc91023bdab3e4812 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 9.4E-7 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_000412 416b4dae1b0b33afc91023bdab3e4812 235 Pfam PF07702 UTRA domain 89 226 2.7E-38 T 13-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VEA_000412 416b4dae1b0b33afc91023bdab3e4812 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 67 1.3E-18 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_000412 416b4dae1b0b33afc91023bdab3e4812 235 SUPERFAMILY SSF64288 56 232 2.04E-47 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VEA_000412 416b4dae1b0b33afc91023bdab3e4812 235 SMART SM00866 88 227 1.2E-34 T 13-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VEA_003947 7b2965d6ee167f77dc6a988a0c8a1898 405 Gene3D G3DSA:3.90.550.10 2 286 8.6E-84 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEA_003947 7b2965d6ee167f77dc6a988a0c8a1898 405 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 193 203 - T 13-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VEA_003947 7b2965d6ee167f77dc6a988a0c8a1898 405 SUPERFAMILY SSF51161 292 403 3.68E-15 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily VEA_003947 7b2965d6ee167f77dc6a988a0c8a1898 405 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 95 103 - T 13-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VEA_003947 7b2965d6ee167f77dc6a988a0c8a1898 405 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 13-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VEA_003947 7b2965d6ee167f77dc6a988a0c8a1898 405 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 403 48.566 T 13-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VEA_003947 7b2965d6ee167f77dc6a988a0c8a1898 405 SUPERFAMILY SSF53448 4 358 1.78E-70 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEA_003947 7b2965d6ee167f77dc6a988a0c8a1898 405 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 4 377 4.5E-154 T 13-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VEA_003947 7b2965d6ee167f77dc6a988a0c8a1898 405 Pfam PF00483 Nucleotidyl transferase 6 273 7.1E-64 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 VEA_003947 7b2965d6ee167f77dc6a988a0c8a1898 405 Gene3D G3DSA:2.160.10.10 287 403 8.7E-33 T 13-10-2018 VEA_000099 78faa5d90d30ec9275286f944068b849 567 Gene3D G3DSA:3.40.250.10 471 563 2.4E-23 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily VEA_000099 78faa5d90d30ec9275286f944068b849 567 SUPERFAMILY SSF52821 459 560 7.73E-23 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily VEA_000099 78faa5d90d30ec9275286f944068b849 567 Gene3D G3DSA:3.50.50.60 3 361 1.6E-187 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_000099 78faa5d90d30ec9275286f944068b849 567 Pfam PF00581 Rhodanese-like domain 485 560 7.1E-9 T 13-10-2018 IPR001763 Rhodanese-like domain VEA_000099 78faa5d90d30ec9275286f944068b849 567 SMART SM00450 473 565 4.1E-12 T 13-10-2018 IPR001763 Rhodanese-like domain VEA_000099 78faa5d90d30ec9275286f944068b849 567 SUPERFAMILY SSF51905 2 198 4.28E-40 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_000099 78faa5d90d30ec9275286f944068b849 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 8.6E-23 T 13-10-2018 VEA_000099 78faa5d90d30ec9275286f944068b849 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 8.6E-23 T 13-10-2018 VEA_000099 78faa5d90d30ec9275286f944068b849 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 8.6E-23 T 13-10-2018 VEA_000099 78faa5d90d30ec9275286f944068b849 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 8.6E-23 T 13-10-2018 VEA_000099 78faa5d90d30ec9275286f944068b849 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 272 8.6E-23 T 13-10-2018 VEA_000099 78faa5d90d30ec9275286f944068b849 567 SUPERFAMILY SSF51905 155 340 2.76E-28 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_000099 78faa5d90d30ec9275286f944068b849 567 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 328 3.3E-52 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VEA_000099 78faa5d90d30ec9275286f944068b849 567 SUPERFAMILY SSF55424 344 467 1.62E-34 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VEA_000099 78faa5d90d30ec9275286f944068b849 567 Gene3D G3DSA:3.50.50.60 115 461 1.6E-187 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_000099 78faa5d90d30ec9275286f944068b849 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 2.2E-19 T 13-10-2018 VEA_000099 78faa5d90d30ec9275286f944068b849 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 2.2E-19 T 13-10-2018 VEA_000099 78faa5d90d30ec9275286f944068b849 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 153 178 2.2E-19 T 13-10-2018 VEA_000099 78faa5d90d30ec9275286f944068b849 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 257 271 2.2E-19 T 13-10-2018 VEA_000099 78faa5d90d30ec9275286f944068b849 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 2.2E-19 T 13-10-2018 VEA_000099 78faa5d90d30ec9275286f944068b849 567 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 350 451 7.4E-16 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VEA_002441 835db968ac8a57634daa57d52e53d687 417 SUPERFAMILY SSF109604 160 330 1.1E-26 T 13-10-2018 VEA_002441 835db968ac8a57634daa57d52e53d687 417 Pfam PF11871 Domain of unknown function (DUF3391) 4 137 2.9E-30 T 13-10-2018 IPR021812 Protein of unknown function DUF3391 VEA_002441 835db968ac8a57634daa57d52e53d687 417 Gene3D G3DSA:1.10.3210.10 21 330 1.0E-56 T 13-10-2018 VEA_002441 835db968ac8a57634daa57d52e53d687 417 Pfam PF01966 HD domain 170 290 1.2E-16 T 13-10-2018 IPR006674 HD domain VEA_002441 835db968ac8a57634daa57d52e53d687 417 SMART SM00471 164 300 6.8E-7 T 13-10-2018 IPR003607 HD/PDEase domain VEA_002441 835db968ac8a57634daa57d52e53d687 417 TIGRFAM TIGR00277 HDIG: HDIG domain 166 259 7.3E-8 T 13-10-2018 IPR006675 HDIG domain VEA_003523 e3880369cde03a3719814b928d063304 203 Gene3D G3DSA:2.40.30.20 1 89 3.2E-31 T 13-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEA_003523 e3880369cde03a3719814b928d063304 203 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 201 2.6E-75 T 13-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VEA_003523 e3880369cde03a3719814b928d063304 203 PIRSF PIRSF000498 1 203 1.8E-67 T 13-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VEA_003523 e3880369cde03a3719814b928d063304 203 Gene3D G3DSA:2.40.30.20 94 190 3.3E-27 T 13-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEA_003523 e3880369cde03a3719814b928d063304 203 SUPERFAMILY SSF63380 93 198 2.89E-29 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VEA_003523 e3880369cde03a3719814b928d063304 203 SUPERFAMILY SSF63380 1 93 7.31E-26 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VEA_003523 e3880369cde03a3719814b928d063304 203 Pfam PF00677 Lumazine binding domain 100 184 4.3E-20 T 13-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VEA_003523 e3880369cde03a3719814b928d063304 203 Pfam PF00677 Lumazine binding domain 3 87 1.6E-20 T 13-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VEA_002555 200e4e35c158edbc719ea3d27ee43b33 222 Pfam PF00484 Carbonic anhydrase 38 188 3.1E-50 T 13-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VEA_002555 200e4e35c158edbc719ea3d27ee43b33 222 Gene3D G3DSA:3.40.1050.10 1 222 8.1E-91 T 13-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 VEA_002555 200e4e35c158edbc719ea3d27ee43b33 222 SMART SM00947 30 192 1.5E-67 T 13-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VEA_002555 200e4e35c158edbc719ea3d27ee43b33 222 SUPERFAMILY SSF53056 2 212 2.22E-74 T 13-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 VEA_002555 200e4e35c158edbc719ea3d27ee43b33 222 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 13-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VEA_002555 200e4e35c158edbc719ea3d27ee43b33 222 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 13-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VEA_002978 ddce3df4fae61259e0d43f2cd3d926c4 528 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 516 0.0 T 13-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 VEA_002978 ddce3df4fae61259e0d43f2cd3d926c4 528 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 514 9.7E-303 T 13-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 VEA_002978 ddce3df4fae61259e0d43f2cd3d926c4 528 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 528 374.576 T 13-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 VEA_004445 85f4c627339e28dfbe802610122c3522 407 SMART SM00490 260 341 2.1E-31 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_004445 85f4c627339e28dfbe802610122c3522 407 Gene3D G3DSA:3.40.50.300 1 211 1.3E-70 T 13-10-2018 VEA_004445 85f4c627339e28dfbe802610122c3522 407 Pfam PF00270 DEAD/DEAH box helicase 27 195 6.2E-45 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VEA_004445 85f4c627339e28dfbe802610122c3522 407 SUPERFAMILY SSF52540 76 358 7.32E-67 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_004445 85f4c627339e28dfbe802610122c3522 407 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VEA_004445 85f4c627339e28dfbe802610122c3522 407 SMART SM00487 22 222 4.3E-55 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEA_004445 85f4c627339e28dfbe802610122c3522 407 Pfam PF00271 Helicase conserved C-terminal domain 234 341 1.9E-31 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_004445 85f4c627339e28dfbe802610122c3522 407 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 3 407 49.923 T 13-10-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 VEA_004445 85f4c627339e28dfbe802610122c3522 407 Gene3D G3DSA:3.40.50.300 217 407 5.0E-52 T 13-10-2018 VEA_002527 aabfed6ef276d295c11b102c3d6ab1cb 316 Gene3D G3DSA:3.90.180.10 10 310 1.8E-91 T 13-10-2018 VEA_002527 aabfed6ef276d295c11b102c3d6ab1cb 316 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 93 3.6E-7 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VEA_002527 aabfed6ef276d295c11b102c3d6ab1cb 316 SUPERFAMILY SSF50129 4 154 2.43E-35 T 13-10-2018 IPR011032 GroES-like superfamily VEA_002527 aabfed6ef276d295c11b102c3d6ab1cb 316 Pfam PF13602 Zinc-binding dehydrogenase 191 312 4.1E-20 T 13-10-2018 VEA_002527 aabfed6ef276d295c11b102c3d6ab1cb 316 SUPERFAMILY SSF51735 122 242 1.98E-28 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_002527 aabfed6ef276d295c11b102c3d6ab1cb 316 Gene3D G3DSA:3.40.50.720 133 263 1.8E-91 T 13-10-2018 VEA_002527 aabfed6ef276d295c11b102c3d6ab1cb 316 SMART SM00829 12 312 1.3E-13 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VEA_002799 8d8a11303fda54c1b8d8e870345140f4 83 PIRSF PIRSF037266 1 82 1.9E-35 T 13-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 VEA_002799 8d8a11303fda54c1b8d8e870345140f4 83 Gene3D G3DSA:1.10.10.10 1 83 2.0E-31 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_002799 8d8a11303fda54c1b8d8e870345140f4 83 Pfam PF09904 Winged helix-turn helix 1 79 3.7E-32 T 13-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 VEA_000554 9401c6f98bec7269f739db5fac76a902 481 SUPERFAMILY SSF46785 19 87 1.48E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000554 9401c6f98bec7269f739db5fac76a902 481 Pfam PF00155 Aminotransferase class I and II 145 444 4.3E-28 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VEA_000554 9401c6f98bec7269f739db5fac76a902 481 SMART SM00345 27 86 1.4E-12 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_000554 9401c6f98bec7269f739db5fac76a902 481 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 60 76 4.8E-6 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_000554 9401c6f98bec7269f739db5fac76a902 481 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 60 4.8E-6 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_000554 9401c6f98bec7269f739db5fac76a902 481 Gene3D G3DSA:1.10.10.10 17 87 6.4E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000554 9401c6f98bec7269f739db5fac76a902 481 Pfam PF00392 Bacterial regulatory proteins, gntR family 29 86 1.5E-12 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_000554 9401c6f98bec7269f739db5fac76a902 481 SUPERFAMILY SSF53383 116 477 3.17E-80 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_000554 9401c6f98bec7269f739db5fac76a902 481 Gene3D G3DSA:3.40.640.10 102 471 2.2E-103 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_000039 2664bb1ccead229293fa4cba7e763f4c 487 Gene3D G3DSA:3.50.50.60 123 263 5.6E-34 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_000039 2664bb1ccead229293fa4cba7e763f4c 487 Gene3D G3DSA:1.10.10.1100 370 440 9.3E-23 T 13-10-2018 VEA_000039 2664bb1ccead229293fa4cba7e763f4c 487 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 10 312 1.9E-21 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VEA_000039 2664bb1ccead229293fa4cba7e763f4c 487 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 255 271 1.9E-16 T 13-10-2018 VEA_000039 2664bb1ccead229293fa4cba7e763f4c 487 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 1.9E-16 T 13-10-2018 VEA_000039 2664bb1ccead229293fa4cba7e763f4c 487 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 287 309 1.9E-16 T 13-10-2018 VEA_000039 2664bb1ccead229293fa4cba7e763f4c 487 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 1.9E-16 T 13-10-2018 VEA_000039 2664bb1ccead229293fa4cba7e763f4c 487 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 10 32 1.5E-10 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEA_000039 2664bb1ccead229293fa4cba7e763f4c 487 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 44 59 1.5E-10 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEA_000039 2664bb1ccead229293fa4cba7e763f4c 487 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 112 120 1.5E-10 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEA_000039 2664bb1ccead229293fa4cba7e763f4c 487 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 297 315 1.5E-10 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEA_000039 2664bb1ccead229293fa4cba7e763f4c 487 SUPERFAMILY SSF51905 6 332 1.42E-37 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_000039 2664bb1ccead229293fa4cba7e763f4c 487 PIRSF PIRSF037495 2 468 3.0E-145 T 13-10-2018 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B GO:0016491|GO:0055114 VEA_000039 2664bb1ccead229293fa4cba7e763f4c 487 Gene3D G3DSA:3.50.50.60 10 314 5.6E-34 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_000039 2664bb1ccead229293fa4cba7e763f4c 487 Pfam PF04324 BFD-like [2Fe-2S] binding domain 379 430 4.0E-11 T 13-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain VEA_002228 4fd905203ae2a4ca436fc80a85eaef4b 431 Pfam PF00589 Phage integrase family 255 405 8.3E-14 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VEA_002228 4fd905203ae2a4ca436fc80a85eaef4b 431 Pfam PF13102 Phage integrase SAM-like domain 144 225 1.5E-6 T 13-10-2018 IPR025269 Phage integrase SAM-like domain VEA_002228 4fd905203ae2a4ca436fc80a85eaef4b 431 Gene3D G3DSA:1.10.443.10 244 420 3.5E-18 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VEA_002228 4fd905203ae2a4ca436fc80a85eaef4b 431 SUPERFAMILY SSF56349 134 414 1.32E-39 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VEA_002228 4fd905203ae2a4ca436fc80a85eaef4b 431 Gene3D G3DSA:1.10.150.130 131 243 3.6E-9 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal VEA_003284 55dc854f7f7af2a86867aa9c7950b33e 401 SUPERFAMILY SSF56349 101 397 1.74E-58 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VEA_003284 55dc854f7f7af2a86867aa9c7950b33e 401 Gene3D G3DSA:1.10.150.130 98 211 9.3E-17 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal VEA_003284 55dc854f7f7af2a86867aa9c7950b33e 401 Gene3D G3DSA:3.30.160.390 6 92 1.3E-10 T 13-10-2018 IPR038488 Integrase, DNA-binding domain superfamily VEA_003284 55dc854f7f7af2a86867aa9c7950b33e 401 Pfam PF00589 Phage integrase family 251 389 1.3E-30 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VEA_003284 55dc854f7f7af2a86867aa9c7950b33e 401 Gene3D G3DSA:1.10.443.10 212 401 3.0E-43 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VEA_003284 55dc854f7f7af2a86867aa9c7950b33e 401 Pfam PF13356 Arm DNA-binding domain 7 89 3.3E-10 T 13-10-2018 IPR025166 Integrase, DNA-binding domain VEA_001480 cbdd0c26253761aeef90ba032d7513a4 264 SUPERFAMILY SSF56534 3 234 4.84E-97 T 13-10-2018 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily VEA_001480 cbdd0c26253761aeef90ba032d7513a4 264 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 11 229 4.2E-46 T 13-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 VEA_001480 cbdd0c26253761aeef90ba032d7513a4 264 Gene3D G3DSA:1.10.800.10 1 264 1.1E-95 T 13-10-2018 IPR036951 Aromatic amino acid hydroxylase superfamily GO:0004497|GO:0005506|GO:0009072|GO:0055114 VEA_001480 cbdd0c26253761aeef90ba032d7513a4 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 208 227 3.2E-9 T 13-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 VEA_001480 cbdd0c26253761aeef90ba032d7513a4 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 72 94 3.2E-9 T 13-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 VEA_001480 cbdd0c26253761aeef90ba032d7513a4 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 176 194 3.2E-9 T 13-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 VEA_001480 cbdd0c26253761aeef90ba032d7513a4 264 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 14 238 4.4E-94 T 13-10-2018 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|KEGG: 00790+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158 VEA_001480 cbdd0c26253761aeef90ba032d7513a4 264 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 115 126 - T 13-10-2018 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 VEA_004454 e27f23cef671df1c7c78f72c7c91ba1c 188 SUPERFAMILY SSF52218 7 152 3.02E-31 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VEA_004454 e27f23cef671df1c7c78f72c7c91ba1c 188 Gene3D G3DSA:3.40.50.360 3 173 6.0E-34 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VEA_004454 e27f23cef671df1c7c78f72c7c91ba1c 188 Pfam PF03358 NADPH-dependent FMN reductase 8 119 6.1E-22 T 13-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 VEA_000258 ff953e3d18f6ae2d39b50e5737a5cc67 129 SUPERFAMILY SSF101386 2 103 2.24E-15 T 13-10-2018 VEA_000258 ff953e3d18f6ae2d39b50e5737a5cc67 129 Gene3D G3DSA:1.10.287.1080 1 128 1.5E-14 T 13-10-2018 VEA_000258 ff953e3d18f6ae2d39b50e5737a5cc67 129 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 27 93 6.2E-19 T 13-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core VEA_000715 70db597e6dd2615386893a086ed8b903 354 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 300 344 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VEA_000715 70db597e6dd2615386893a086ed8b903 354 SUPERFAMILY SSF46689 299 349 5.38E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_000715 70db597e6dd2615386893a086ed8b903 354 Pfam PF12833 Helix-turn-helix domain 269 349 8.0E-26 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_000715 70db597e6dd2615386893a086ed8b903 354 SMART SM00342 263 348 2.5E-23 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_000715 70db597e6dd2615386893a086ed8b903 354 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 317 332 4.1E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEA_000715 70db597e6dd2615386893a086ed8b903 354 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 332 348 4.1E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEA_000715 70db597e6dd2615386893a086ed8b903 354 Gene3D G3DSA:1.10.10.60 246 351 1.4E-30 T 13-10-2018 VEA_002951 bca90d56e4f8d7541e78246f60b30721 468 Gene3D G3DSA:1.10.8.60 319 397 1.5E-23 T 13-10-2018 VEA_002951 bca90d56e4f8d7541e78246f60b30721 468 SMART SM00382 167 310 5.1E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_002951 bca90d56e4f8d7541e78246f60b30721 468 Gene3D G3DSA:1.10.10.60 413 457 9.1E-10 T 13-10-2018 VEA_002951 bca90d56e4f8d7541e78246f60b30721 468 SUPERFAMILY SSF46689 360 458 2.33E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_002951 bca90d56e4f8d7541e78246f60b30721 468 Pfam PF00158 Sigma-54 interaction domain 148 313 3.1E-69 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VEA_002951 bca90d56e4f8d7541e78246f60b30721 468 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 233 248 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VEA_002951 bca90d56e4f8d7541e78246f60b30721 468 Pfam PF00072 Response regulator receiver domain 14 122 1.2E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_002951 bca90d56e4f8d7541e78246f60b30721 468 Gene3D G3DSA:3.40.50.300 138 318 2.3E-65 T 13-10-2018 VEA_002951 bca90d56e4f8d7541e78246f60b30721 468 SMART SM00448 11 122 1.5E-30 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_002951 bca90d56e4f8d7541e78246f60b30721 468 SUPERFAMILY SSF52540 147 390 2.53E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002951 bca90d56e4f8d7541e78246f60b30721 468 Gene3D G3DSA:3.40.50.2300 2 137 1.2E-32 T 13-10-2018 VEA_002951 bca90d56e4f8d7541e78246f60b30721 468 Pfam PF02954 Bacterial regulatory protein, Fis family 419 459 4.8E-13 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEA_002951 bca90d56e4f8d7541e78246f60b30721 468 SUPERFAMILY SSF52172 11 191 1.18E-41 T 13-10-2018 IPR011006 CheY-like superfamily VEA_002951 bca90d56e4f8d7541e78246f60b30721 468 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 360 369 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VEA_002525 b5f08b83f5d8f2137365be0537d2d929 594 Pfam PF00364 Biotin-requiring enzyme 528 592 1.2E-16 T 13-10-2018 IPR000089 Biotin/lipoyl attachment VEA_002525 b5f08b83f5d8f2137365be0537d2d929 594 SUPERFAMILY SSF89000 297 462 1.49E-52 T 13-10-2018 VEA_002525 b5f08b83f5d8f2137365be0537d2d929 594 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 7 588 6.7E-269 T 13-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 VEA_002525 b5f08b83f5d8f2137365be0537d2d929 594 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 550 567 - T 13-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VEA_002525 b5f08b83f5d8f2137365be0537d2d929 594 SUPERFAMILY SSF51569 1 300 6.04E-90 T 13-10-2018 VEA_002525 b5f08b83f5d8f2137365be0537d2d929 594 Pfam PF00682 HMGL-like 6 270 4.3E-60 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 VEA_002525 b5f08b83f5d8f2137365be0537d2d929 594 SUPERFAMILY SSF51230 519 593 2.49E-20 T 13-10-2018 IPR011053 Single hybrid motif VEA_002525 b5f08b83f5d8f2137365be0537d2d929 594 Gene3D G3DSA:3.20.20.70 1 464 1.6E-174 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_002525 b5f08b83f5d8f2137365be0537d2d929 594 Pfam PF02436 Conserved carboxylase domain 292 493 1.2E-59 T 13-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 VEA_002525 b5f08b83f5d8f2137365be0537d2d929 594 Gene3D G3DSA:2.40.50.100 521 594 5.9E-23 T 13-10-2018 VEA_001861 e7bc403b0e978aef96efa338be0a69bf 407 Gene3D G3DSA:1.25.40.10 39 147 1.0E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_001861 e7bc403b0e978aef96efa338be0a69bf 407 Gene3D G3DSA:1.25.40.10 272 397 3.1E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_001861 e7bc403b0e978aef96efa338be0a69bf 407 SMART SM00028 74 107 7.4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_001861 e7bc403b0e978aef96efa338be0a69bf 407 SMART SM00028 360 392 180.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_001861 e7bc403b0e978aef96efa338be0a69bf 407 SMART SM00028 151 184 3.4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_001861 e7bc403b0e978aef96efa338be0a69bf 407 Pfam PF13181 Tetratricopeptide repeat 151 181 0.028 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_001861 e7bc403b0e978aef96efa338be0a69bf 407 Gene3D G3DSA:1.25.40.10 148 257 3.5E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_001861 e7bc403b0e978aef96efa338be0a69bf 407 SUPERFAMILY SSF48452 51 247 1.29E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_001861 e7bc403b0e978aef96efa338be0a69bf 407 SUPERFAMILY SSF48452 216 388 1.4E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_001525 8a6d93565f4efea08b93e812e208b3d3 644 SMART SM00487 25 223 5.3E-61 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEA_001525 8a6d93565f4efea08b93e812e208b3d3 644 Pfam PF03880 DbpA RNA binding domain 475 542 1.6E-15 T 13-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain VEA_001525 8a6d93565f4efea08b93e812e208b3d3 644 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 547 41.68 T 13-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 VEA_001525 8a6d93565f4efea08b93e812e208b3d3 644 Gene3D G3DSA:3.40.50.300 1 211 9.5E-74 T 13-10-2018 VEA_001525 8a6d93565f4efea08b93e812e208b3d3 644 Gene3D G3DSA:3.30.70.330 476 545 3.3E-9 T 13-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VEA_001525 8a6d93565f4efea08b93e812e208b3d3 644 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VEA_001525 8a6d93565f4efea08b93e812e208b3d3 644 SMART SM00490 259 340 1.3E-34 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_001525 8a6d93565f4efea08b93e812e208b3d3 644 Pfam PF00270 DEAD/DEAH box helicase 30 196 7.1E-50 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VEA_001525 8a6d93565f4efea08b93e812e208b3d3 644 Pfam PF00271 Helicase conserved C-terminal domain 232 340 6.8E-30 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_001525 8a6d93565f4efea08b93e812e208b3d3 644 SUPERFAMILY SSF52540 74 361 1.66E-74 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001525 8a6d93565f4efea08b93e812e208b3d3 644 Gene3D G3DSA:3.40.50.300 215 434 5.2E-53 T 13-10-2018 VEA_000854 c72bd1012202fa8870433775ae38042e 153 Gene3D G3DSA:2.40.440.10 12 151 2.5E-16 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VEA_000854 c72bd1012202fa8870433775ae38042e 153 SUPERFAMILY SSF141523 17 151 1.01E-23 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VEA_000854 c72bd1012202fa8870433775ae38042e 153 Pfam PF03734 L,D-transpeptidase catalytic domain 17 151 5.8E-19 T 13-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 VEA_000803 953e678557d363802b26e021e10fe406 402 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 399 8.2E-142 T 13-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 VEA_000803 953e678557d363802b26e021e10fe406 402 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 1.9E-23 T 13-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 VEA_000803 953e678557d363802b26e021e10fe406 402 Pfam PF07670 Nucleoside recognition 90 185 2.9E-8 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VEA_000803 953e678557d363802b26e021e10fe406 402 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 399 1.9E-73 T 13-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 VEA_002943 7861427a90f62df433031463b7e9623a 213 Gene3D G3DSA:1.10.340.30 21 132 9.6E-78 T 13-10-2018 VEA_002943 7861427a90f62df433031463b7e9623a 213 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.5E-4 T 13-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 VEA_002943 7861427a90f62df433031463b7e9623a 213 SMART SM00478 38 185 2.2E-55 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 VEA_002943 7861427a90f62df433031463b7e9623a 213 Pfam PF00633 Helix-hairpin-helix motif 100 127 2.1E-7 T 13-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 VEA_002943 7861427a90f62df433031463b7e9623a 213 PIRSF PIRSF001435 1 211 4.7E-50 T 13-10-2018 VEA_002943 7861427a90f62df433031463b7e9623a 213 SUPERFAMILY SSF48150 5 207 1.52E-70 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 VEA_002943 7861427a90f62df433031463b7e9623a 213 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.913 T 13-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 VEA_002943 7861427a90f62df433031463b7e9623a 213 SMART SM00525 186 206 6.5E-6 T 13-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 VEA_002943 7861427a90f62df433031463b7e9623a 213 TIGRFAM TIGR01083 nth: endonuclease III 5 194 1.2E-87 T 13-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 VEA_002943 7861427a90f62df433031463b7e9623a 213 Gene3D G3DSA:1.10.1670.10 11 203 9.6E-78 T 13-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 VEA_002943 7861427a90f62df433031463b7e9623a 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 4.7E-19 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 VEA_002943 7861427a90f62df433031463b7e9623a 213 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 13-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 VEA_002943 7861427a90f62df433031463b7e9623a 213 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 13-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 VEA_002630 92054d0637050e9c4cd8a02faa22550a 442 SUPERFAMILY SSF54680 337 437 6.67E-29 T 13-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEA_002630 92054d0637050e9c4cd8a02faa22550a 442 SUPERFAMILY SSF52418 73 334 1.83E-88 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEA_002630 92054d0637050e9c4cd8a02faa22550a 442 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 3 427 4.4E-214 T 13-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 VEA_002630 92054d0637050e9c4cd8a02faa22550a 442 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 350 423 9.9E-24 T 13-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEA_002630 92054d0637050e9c4cd8a02faa22550a 442 Gene3D G3DSA:3.90.1170.30 337 432 1.4E-29 T 13-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEA_002630 92054d0637050e9c4cd8a02faa22550a 442 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 3.5E-21 T 13-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEA_002630 92054d0637050e9c4cd8a02faa22550a 442 Gene3D G3DSA:3.40.1030.10 70 322 1.6E-127 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEA_002630 92054d0637050e9c4cd8a02faa22550a 442 Pfam PF00591 Glycosyl transferase family, a/b domain 80 309 3.4E-48 T 13-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEA_002630 92054d0637050e9c4cd8a02faa22550a 442 PIRSF PIRSF000478 1 438 8.6E-149 T 13-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEA_002630 92054d0637050e9c4cd8a02faa22550a 442 SUPERFAMILY SSF47648 2 70 1.14E-21 T 13-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEA_002630 92054d0637050e9c4cd8a02faa22550a 442 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 13-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEA_002630 92054d0637050e9c4cd8a02faa22550a 442 Gene3D G3DSA:1.20.970.10 7 195 1.6E-127 T 13-10-2018 VEA_002630 92054d0637050e9c4cd8a02faa22550a 442 Hamap MF_01628 Thymidine phosphorylase [deoA]. 2 437 45.57 T 13-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 VEA_002630 92054d0637050e9c4cd8a02faa22550a 442 SMART SM00941 350 424 1.4E-28 T 13-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEA_002630 92054d0637050e9c4cd8a02faa22550a 442 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 6.0E-160 T 13-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEA_001174 7eee454a868a5f2190903c02946c0190 281 SUPERFAMILY SSF64518 1 281 1.1E-76 T 13-10-2018 VEA_001174 7eee454a868a5f2190903c02946c0190 281 Gene3D G3DSA:2.170.280.10 181 191 4.8E-60 T 13-10-2018 VEA_001174 7eee454a868a5f2190903c02946c0190 281 Gene3D G3DSA:1.20.58.1830 7 33 4.8E-60 T 13-10-2018 VEA_001174 7eee454a868a5f2190903c02946c0190 281 Gene3D G3DSA:1.20.1330.10 45 180 4.8E-60 T 13-10-2018 VEA_001174 7eee454a868a5f2190903c02946c0190 281 Pfam PF00669 Bacterial flagellin N-terminal helical region 6 140 3.3E-44 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VEA_001174 7eee454a868a5f2190903c02946c0190 281 Pfam PF00700 Bacterial flagellin C-terminal helical region 201 280 5.0E-27 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VEA_001174 7eee454a868a5f2190903c02946c0190 281 Gene3D G3DSA:1.10.8.410 229 281 5.3E-19 T 13-10-2018 VEA_001174 7eee454a868a5f2190903c02946c0190 281 PRINTS PR00207 Flagellin signature 111 134 4.5E-20 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VEA_001174 7eee454a868a5f2190903c02946c0190 281 PRINTS PR00207 Flagellin signature 76 95 4.5E-20 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VEA_001174 7eee454a868a5f2190903c02946c0190 281 PRINTS PR00207 Flagellin signature 37 54 4.5E-20 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VEA_000246 cdf4d1acd550aafd37dd9e724178b57b 342 Pfam PF02253 Phospholipase A1 78 338 8.3E-96 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 VEA_000246 cdf4d1acd550aafd37dd9e724178b57b 342 SUPERFAMILY SSF56931 78 341 4.05E-90 T 13-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 VEA_000246 cdf4d1acd550aafd37dd9e724178b57b 342 Gene3D G3DSA:2.40.230.10 77 341 5.1E-88 T 13-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 VEA_000246 cdf4d1acd550aafd37dd9e724178b57b 342 PRINTS PR01486 Bacterial phospholipase A1 protein signature 311 331 1.1E-29 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 VEA_000246 cdf4d1acd550aafd37dd9e724178b57b 342 PRINTS PR01486 Bacterial phospholipase A1 protein signature 124 141 1.1E-29 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 VEA_000246 cdf4d1acd550aafd37dd9e724178b57b 342 PRINTS PR01486 Bacterial phospholipase A1 protein signature 289 306 1.1E-29 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 VEA_000246 cdf4d1acd550aafd37dd9e724178b57b 342 PRINTS PR01486 Bacterial phospholipase A1 protein signature 170 189 1.1E-29 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 VEA_000246 cdf4d1acd550aafd37dd9e724178b57b 342 PRINTS PR01486 Bacterial phospholipase A1 protein signature 256 274 1.1E-29 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 VEA_001672 98ce6ed3011d0d138e7117ce38d3d1cb 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 2.0E-18 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001672 98ce6ed3011d0d138e7117ce38d3d1cb 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.456 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001672 98ce6ed3011d0d138e7117ce38d3d1cb 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 13-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_001672 98ce6ed3011d0d138e7117ce38d3d1cb 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 2.7E-39 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001672 98ce6ed3011d0d138e7117ce38d3d1cb 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 2.7E-39 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001672 98ce6ed3011d0d138e7117ce38d3d1cb 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 2.7E-39 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001672 98ce6ed3011d0d138e7117ce38d3d1cb 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 1.4E-43 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001672 98ce6ed3011d0d138e7117ce38d3d1cb 85 Gene3D G3DSA:2.40.50.100 21 85 1.1E-31 T 13-10-2018 VEA_001672 98ce6ed3011d0d138e7117ce38d3d1cb 85 Pfam PF01016 Ribosomal L27 protein 2 82 9.4E-40 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001672 98ce6ed3011d0d138e7117ce38d3d1cb 85 SUPERFAMILY SSF110324 2 80 1.01E-34 T 13-10-2018 VEA_002011 fd5e81db4d01d31954ce796e144e2d90 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 112 1.7E-24 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VEA_002011 fd5e81db4d01d31954ce796e144e2d90 223 Gene3D G3DSA:1.10.3720.10 1 222 1.1E-52 T 13-10-2018 IPR035906 MetI-like superfamily VEA_002011 fd5e81db4d01d31954ce796e144e2d90 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 217 1.4E-17 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_002011 fd5e81db4d01d31954ce796e144e2d90 223 SUPERFAMILY SSF161098 13 203 3.14E-43 T 13-10-2018 IPR035906 MetI-like superfamily VEA_001459 8a0b82d5f77546646e276d261a0cbca5 181 SUPERFAMILY SSF52980 2 177 5.63E-62 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VEA_001459 8a0b82d5f77546646e276d261a0cbca5 181 PIRSF PIRSF011484 1 179 5.6E-62 T 13-10-2018 IPR009822 YaeQ VEA_001459 8a0b82d5f77546646e276d261a0cbca5 181 Pfam PF07152 YaeQ protein 1 171 9.5E-64 T 13-10-2018 IPR009822 YaeQ VEA_001459 8a0b82d5f77546646e276d261a0cbca5 181 SMART SM01322 1 174 2.6E-96 T 13-10-2018 IPR009822 YaeQ VEA_001459 8a0b82d5f77546646e276d261a0cbca5 181 Gene3D G3DSA:3.10.640.10 1 179 2.1E-63 T 13-10-2018 IPR038590 YaeQ superfamily VEA_002418 5f9f0fbdd9a0eb37cf77c248c3d59237 153 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 150 4.7E-61 T 13-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 VEA_002418 5f9f0fbdd9a0eb37cf77c248c3d59237 153 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 2.0E-46 T 13-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VEA_002418 5f9f0fbdd9a0eb37cf77c248c3d59237 153 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 2.0E-30 T 13-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VEA_002418 5f9f0fbdd9a0eb37cf77c248c3d59237 153 SUPERFAMILY SSF54893 2 100 9.03E-36 T 13-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily VEA_002418 5f9f0fbdd9a0eb37cf77c248c3d59237 153 SUPERFAMILY SSF57825 101 151 6.8E-16 T 13-10-2018 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily VEA_002418 5f9f0fbdd9a0eb37cf77c248c3d59237 153 Gene3D G3DSA:3.30.70.140 1 100 1.1E-36 T 13-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily VEA_002418 5f9f0fbdd9a0eb37cf77c248c3d59237 153 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 150 3.6E-19 T 13-10-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal VEA_002418 5f9f0fbdd9a0eb37cf77c248c3d59237 153 Gene3D G3DSA:2.30.30.20 101 153 9.8E-25 T 13-10-2018 VEA_002418 5f9f0fbdd9a0eb37cf77c248c3d59237 153 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 33.847 T 13-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 VEA_000860 d1832cb789776163e8e3b8987e064d8c 199 Pfam PF04013 Putative SAM-dependent RNA methyltransferase 1 198 2.3E-67 T 13-10-2018 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY GO:0008175 VEA_000860 d1832cb789776163e8e3b8987e064d8c 199 SUPERFAMILY SSF75217 1 198 1.02E-67 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases VEA_000860 d1832cb789776163e8e3b8987e064d8c 199 Hamap MF_00587 tRNA (pseudouridine(54)-N(1))-methyltransferase [trmY]. 1 198 28.24 T 13-10-2018 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY GO:0008175 VEA_000860 d1832cb789776163e8e3b8987e064d8c 199 Gene3D G3DSA:3.40.1280.10 1 199 2.9E-59 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VEA_002655 b3e2c4fb0724673ccf8e3922168cd5a4 306 SUPERFAMILY SSF46785 7 85 1.09E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_002655 b3e2c4fb0724673ccf8e3922168cd5a4 306 Gene3D G3DSA:1.10.10.10 3 92 4.1E-29 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_002655 b3e2c4fb0724673ccf8e3922168cd5a4 306 SUPERFAMILY SSF53850 94 299 1.36E-36 T 13-10-2018 VEA_002655 b3e2c4fb0724673ccf8e3922168cd5a4 306 Pfam PF03466 LysR substrate binding domain 100 289 9.2E-25 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_002655 b3e2c4fb0724673ccf8e3922168cd5a4 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 70 1.2E-14 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_002655 b3e2c4fb0724673ccf8e3922168cd5a4 306 Gene3D G3DSA:3.40.190.10 102 297 2.8E-45 T 13-10-2018 VEA_002655 b3e2c4fb0724673ccf8e3922168cd5a4 306 Gene3D G3DSA:3.40.190.10 175 273 2.8E-45 T 13-10-2018 VEA_002727 c7f3a83fb58d32cf54906f42d55dee51 86 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.4E-16 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_002727 c7f3a83fb58d32cf54906f42d55dee51 86 PRINTS PR01249 Ribosomal protein L31 signature 45 60 1.4E-16 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_002727 c7f3a83fb58d32cf54906f42d55dee51 86 PRINTS PR01249 Ribosomal protein L31 signature 60 78 1.4E-16 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_002727 c7f3a83fb58d32cf54906f42d55dee51 86 Gene3D G3DSA:2.30.170.50 1 84 2.5E-24 T 13-10-2018 VEA_002727 c7f3a83fb58d32cf54906f42d55dee51 86 SUPERFAMILY SSF143800 1 81 3.92E-23 T 13-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002727 c7f3a83fb58d32cf54906f42d55dee51 86 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_002727 c7f3a83fb58d32cf54906f42d55dee51 86 Pfam PF01197 Ribosomal protein L31 1 79 2.3E-27 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_002727 c7f3a83fb58d32cf54906f42d55dee51 86 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 80 3.4E-18 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_002727 c7f3a83fb58d32cf54906f42d55dee51 86 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 29.102 T 13-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_000408 b41f7a9cb10af9ca6c02d4c56b691437 308 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 189 271 8.1E-37 T 13-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 VEA_000408 b41f7a9cb10af9ca6c02d4c56b691437 308 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 252 278 - T 13-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 VEA_000408 b41f7a9cb10af9ca6c02d4c56b691437 308 Gene3D G3DSA:3.40.50.1220 183 308 2.0E-58 T 13-10-2018 VEA_000408 b41f7a9cb10af9ca6c02d4c56b691437 308 SUPERFAMILY SSF52467 186 308 4.28E-49 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VEA_000408 b41f7a9cb10af9ca6c02d4c56b691437 308 Pfam PF01012 Electron transfer flavoprotein domain 4 162 5.1E-36 T 13-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 VEA_000408 b41f7a9cb10af9ca6c02d4c56b691437 308 Gene3D G3DSA:3.40.50.620 4 182 2.7E-49 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_000408 b41f7a9cb10af9ca6c02d4c56b691437 308 SUPERFAMILY SSF52402 4 182 1.95E-48 T 13-10-2018 VEA_000408 b41f7a9cb10af9ca6c02d4c56b691437 308 PIRSF PIRSF000089 1 308 2.2E-109 T 13-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 VEA_000408 b41f7a9cb10af9ca6c02d4c56b691437 308 SMART SM00893 3 187 6.7E-34 T 13-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 VEA_004201 5a14dd22e82ca9c6f1e9227332ee4754 101 Pfam PF04247 Invasion gene expression up-regulator, SirB 1 97 3.4E-30 T 13-10-2018 IPR007360 Invasion gene expression up-regulator, SirB VEA_004201 5a14dd22e82ca9c6f1e9227332ee4754 101 PIRSF PIRSF005610 1 95 2.6E-14 T 13-10-2018 IPR007360 Invasion gene expression up-regulator, SirB VEA_003503 07aec7cccb5e69a1bb9b771646e112a1 483 Gene3D G3DSA:3.40.50.2300 17 134 4.2E-30 T 13-10-2018 VEA_003503 07aec7cccb5e69a1bb9b771646e112a1 483 Gene3D G3DSA:1.10.10.60 426 473 9.5E-14 T 13-10-2018 VEA_003503 07aec7cccb5e69a1bb9b771646e112a1 483 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 457 477 8.8E-5 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEA_003503 07aec7cccb5e69a1bb9b771646e112a1 483 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 440 457 8.8E-5 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEA_003503 07aec7cccb5e69a1bb9b771646e112a1 483 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 240 255 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VEA_003503 07aec7cccb5e69a1bb9b771646e112a1 483 Pfam PF00072 Response regulator receiver domain 18 127 7.6E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_003503 07aec7cccb5e69a1bb9b771646e112a1 483 SMART SM00448 16 127 8.2E-30 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_003503 07aec7cccb5e69a1bb9b771646e112a1 483 SMART SM00382 175 321 2.4E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_003503 07aec7cccb5e69a1bb9b771646e112a1 483 Gene3D G3DSA:1.10.8.60 325 389 2.7E-17 T 13-10-2018 VEA_003503 07aec7cccb5e69a1bb9b771646e112a1 483 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 367 376 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VEA_003503 07aec7cccb5e69a1bb9b771646e112a1 483 SUPERFAMILY SSF46689 425 475 1.97E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_003503 07aec7cccb5e69a1bb9b771646e112a1 483 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 179 192 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VEA_003503 07aec7cccb5e69a1bb9b771646e112a1 483 SUPERFAMILY SSF52540 154 384 5.43E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003503 07aec7cccb5e69a1bb9b771646e112a1 483 Gene3D G3DSA:3.40.50.300 140 324 1.7E-65 T 13-10-2018 VEA_003503 07aec7cccb5e69a1bb9b771646e112a1 483 Pfam PF02954 Bacterial regulatory protein, Fis family 433 474 1.1E-9 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEA_003503 07aec7cccb5e69a1bb9b771646e112a1 483 Pfam PF00158 Sigma-54 interaction domain 155 321 2.0E-68 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VEA_003503 07aec7cccb5e69a1bb9b771646e112a1 483 SUPERFAMILY SSF52172 16 199 2.85E-38 T 13-10-2018 IPR011006 CheY-like superfamily VEA_001434 0793c1526e8d6ac53e21412cb3ca8e0b 204 PRINTS PR00160 Glutaredoxin signature 171 184 2.0E-8 T 13-10-2018 IPR014025 Glutaredoxin subgroup VEA_001434 0793c1526e8d6ac53e21412cb3ca8e0b 204 PRINTS PR00160 Glutaredoxin signature 157 170 2.0E-8 T 13-10-2018 IPR014025 Glutaredoxin subgroup VEA_001434 0793c1526e8d6ac53e21412cb3ca8e0b 204 PRINTS PR00160 Glutaredoxin signature 108 126 2.0E-8 T 13-10-2018 IPR014025 Glutaredoxin subgroup VEA_001434 0793c1526e8d6ac53e21412cb3ca8e0b 204 Gene3D G3DSA:3.40.30.10 109 185 2.4E-19 T 13-10-2018 VEA_001434 0793c1526e8d6ac53e21412cb3ca8e0b 204 Pfam PF00462 Glutaredoxin 109 174 1.0E-16 T 13-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VEA_001434 0793c1526e8d6ac53e21412cb3ca8e0b 204 ProSitePatterns PS00195 Glutaredoxin active site. 110 126 - T 13-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 VEA_001434 0793c1526e8d6ac53e21412cb3ca8e0b 204 SUPERFAMILY SSF52833 109 189 1.31E-18 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VEA_001734 d5416c7f0eac08b463d8687425d13580 63 SUPERFAMILY SSF46561 1 61 2.22E-23 T 13-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001734 d5416c7f0eac08b463d8687425d13580 63 Gene3D G3DSA:1.10.287.310 1 63 3.6E-31 T 13-10-2018 VEA_001734 d5416c7f0eac08b463d8687425d13580 63 Pfam PF00831 Ribosomal L29 protein 4 60 3.7E-25 T 13-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001734 d5416c7f0eac08b463d8687425d13580 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 19.099 T 13-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001734 d5416c7f0eac08b463d8687425d13580 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 13-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001734 d5416c7f0eac08b463d8687425d13580 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 1.4E-23 T 13-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_003268 78acdfdb997797901994dd8224b0e44b 210 Pfam PF13847 Methyltransferase domain 49 158 3.0E-15 T 13-10-2018 IPR025714 Methyltransferase domain VEA_003268 78acdfdb997797901994dd8224b0e44b 210 SUPERFAMILY SSF53335 3 198 1.64E-33 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_003268 78acdfdb997797901994dd8224b0e44b 210 Gene3D G3DSA:3.40.50.150 24 210 2.5E-30 T 13-10-2018 VEA_001036 d23c20d1dcf274ec981dd9f1a6a01d9d 330 Gene3D G3DSA:3.40.50.720 129 296 5.9E-68 T 13-10-2018 VEA_001036 d23c20d1dcf274ec981dd9f1a6a01d9d 330 SMART SM00829 18 328 4.3E-8 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VEA_001036 d23c20d1dcf274ec981dd9f1a6a01d9d 330 SUPERFAMILY SSF50129 16 153 1.02E-24 T 13-10-2018 IPR011032 GroES-like superfamily VEA_001036 d23c20d1dcf274ec981dd9f1a6a01d9d 330 Pfam PF13602 Zinc-binding dehydrogenase 210 328 1.2E-7 T 13-10-2018 VEA_001036 d23c20d1dcf274ec981dd9f1a6a01d9d 330 Gene3D G3DSA:3.90.180.10 14 313 5.9E-68 T 13-10-2018 VEA_001036 d23c20d1dcf274ec981dd9f1a6a01d9d 330 SUPERFAMILY SSF51735 123 289 3.38E-23 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_001036 d23c20d1dcf274ec981dd9f1a6a01d9d 330 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 34 98 8.5E-7 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VEA_004354 60d32fbfd1a870caa904400380b56f69 64 SUPERFAMILY SSF140319 1 62 2.48E-29 T 13-10-2018 IPR036762 IscX-like superfamily VEA_004354 60d32fbfd1a870caa904400380b56f69 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 64 4.7E-36 T 13-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VEA_004354 60d32fbfd1a870caa904400380b56f69 64 Pfam PF04384 Iron-sulphur cluster assembly 1 63 3.9E-35 T 13-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VEA_004354 60d32fbfd1a870caa904400380b56f69 64 Gene3D G3DSA:1.10.10.600 1 64 2.2E-30 T 13-10-2018 IPR036762 IscX-like superfamily VEA_004354 60d32fbfd1a870caa904400380b56f69 64 PIRSF PIRSF039003 1 64 2.0E-35 T 13-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VEA_001846 27fc6282db1faaf4c99134d07a3bb56b 130 Gene3D G3DSA:1.10.3680.10 2 127 9.9E-15 T 13-10-2018 IPR029024 TerB-like VEA_001846 27fc6282db1faaf4c99134d07a3bb56b 130 Pfam PF05099 Tellurite resistance protein TerB 56 104 3.7E-7 T 13-10-2018 IPR007791 Co-chaperone DjlA, N-terminal VEA_001846 27fc6282db1faaf4c99134d07a3bb56b 130 SUPERFAMILY SSF158682 4 123 6.28E-16 T 13-10-2018 IPR029024 TerB-like VEA_002836 8f8d2401a07210095e6e6e7448ec1445 370 Pfam PF01339 CheB methylesterase 185 362 1.9E-58 T 13-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VEA_002836 8f8d2401a07210095e6e6e7448ec1445 370 Gene3D G3DSA:3.40.50.2300 2 131 1.0E-31 T 13-10-2018 VEA_002836 8f8d2401a07210095e6e6e7448ec1445 370 Gene3D G3DSA:3.40.50.180 177 366 9.1E-65 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal VEA_002836 8f8d2401a07210095e6e6e7448ec1445 370 SMART SM00448 3 126 1.3E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_002836 8f8d2401a07210095e6e6e7448ec1445 370 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 368 39.018 T 13-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VEA_002836 8f8d2401a07210095e6e6e7448ec1445 370 PIRSF PIRSF000876 1 368 4.6E-128 T 13-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VEA_002836 8f8d2401a07210095e6e6e7448ec1445 370 SUPERFAMILY SSF52172 2 109 7.68E-27 T 13-10-2018 IPR011006 CheY-like superfamily VEA_002836 8f8d2401a07210095e6e6e7448ec1445 370 SUPERFAMILY SSF52738 179 364 3.14E-63 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal VEA_002836 8f8d2401a07210095e6e6e7448ec1445 370 Pfam PF00072 Response regulator receiver domain 5 109 2.4E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_003166 fb15980fb44fa4843f361708f3aafee3 194 SUPERFAMILY SSF55729 14 185 1.26E-38 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_003166 fb15980fb44fa4843f361708f3aafee3 194 Pfam PF13302 Acetyltransferase (GNAT) domain 17 161 1.8E-18 T 13-10-2018 IPR000182 GNAT domain VEA_003166 fb15980fb44fa4843f361708f3aafee3 194 Gene3D G3DSA:3.40.630.30 14 191 5.8E-45 T 13-10-2018 VEA_004263 cd46144e9b3bbf3bdb0c44f4e98dd6a4 369 SUPERFAMILY SSF142695 205 367 1.57E-48 T 13-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VEA_004263 cd46144e9b3bbf3bdb0c44f4e98dd6a4 369 PIRSF PIRSF001259 3 369 5.6E-131 T 13-10-2018 VEA_004263 cd46144e9b3bbf3bdb0c44f4e98dd6a4 369 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 7 199 2.4E-76 T 13-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VEA_004263 cd46144e9b3bbf3bdb0c44f4e98dd6a4 369 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.776 T 13-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VEA_004263 cd46144e9b3bbf3bdb0c44f4e98dd6a4 369 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 1.9E-85 T 13-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VEA_004263 cd46144e9b3bbf3bdb0c44f4e98dd6a4 369 Gene3D G3DSA:3.90.870.10 1 205 9.3E-90 T 13-10-2018 VEA_004263 cd46144e9b3bbf3bdb0c44f4e98dd6a4 369 Pfam PF00925 GTP cyclohydrolase II 207 367 8.4E-41 T 13-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VEA_004263 cd46144e9b3bbf3bdb0c44f4e98dd6a4 369 SUPERFAMILY SSF55821 3 202 2.22E-87 T 13-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VEA_004263 cd46144e9b3bbf3bdb0c44f4e98dd6a4 369 Gene3D G3DSA:3.40.50.10990 206 368 9.0E-33 T 13-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VEA_002267 fd2e082b4e93e86b6a1d3e23dedea4ed 141 Gene3D G3DSA:1.10.10.10 1 136 6.1E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_002267 fd2e082b4e93e86b6a1d3e23dedea4ed 141 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 128 1.6E-36 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type VEA_002267 fd2e082b4e93e86b6a1d3e23dedea4ed 141 SUPERFAMILY SSF46785 2 131 6.07E-31 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_002267 fd2e082b4e93e86b6a1d3e23dedea4ed 141 Pfam PF02082 Transcriptional regulator 1 82 1.8E-23 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type VEA_002267 fd2e082b4e93e86b6a1d3e23dedea4ed 141 Hamap MF_01177 HTH-type transcriptional repressor NsrR [nsrR]. 1 141 44.93 T 13-10-2018 IPR023761 Transcriptional repressor HTH, NsrR GO:0045892 VEA_002267 fd2e082b4e93e86b6a1d3e23dedea4ed 141 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 13-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site VEA_003563 73d76ff1a7cf888e3861d73df8c1c8d5 163 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 27 6.8E-9 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEA_003563 73d76ff1a7cf888e3861d73df8c1c8d5 163 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 2.6E-8 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEA_003563 73d76ff1a7cf888e3861d73df8c1c8d5 163 SUPERFAMILY SSF54523 7 142 2.28E-13 T 13-10-2018 VEA_003563 73d76ff1a7cf888e3861d73df8c1c8d5 163 Gene3D G3DSA:3.30.700.10 7 108 3.0E-11 T 13-10-2018 VEA_000361 2f4a95ab9d941b7136f2c0ac26093716 392 SUPERFAMILY SSF52540 42 273 3.94E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000361 2f4a95ab9d941b7136f2c0ac26093716 392 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_000361 2f4a95ab9d941b7136f2c0ac26093716 392 SMART SM00382 52 253 4.1E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_000361 2f4a95ab9d941b7136f2c0ac26093716 392 TIGRFAM TIGR03415 ABC_choXWV_ATP: choline ABC transporter, ATP-binding protein 4 384 2.2E-180 T 13-10-2018 IPR022473 ABC transporter, Choline, ATP-binding subunit GO:0015220|GO:0015871|GO:0055052 VEA_000361 2f4a95ab9d941b7136f2c0ac26093716 392 SUPERFAMILY SSF54631 319 388 4.32E-5 T 13-10-2018 VEA_000361 2f4a95ab9d941b7136f2c0ac26093716 392 Gene3D G3DSA:3.40.50.300 31 301 3.4E-69 T 13-10-2018 VEA_000361 2f4a95ab9d941b7136f2c0ac26093716 392 Pfam PF00005 ABC transporter 43 195 3.9E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_002355 96b568201f9128f7bc8cae1fe01e31d7 1226 Gene3D G3DSA:1.10.1240.10 650 738 1.9E-40 T 13-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VEA_002355 96b568201f9128f7bc8cae1fe01e31d7 1226 Gene3D G3DSA:3.10.196.10 909 1224 3.0E-144 T 13-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VEA_002355 96b568201f9128f7bc8cae1fe01e31d7 1226 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 940 1210 1.7E-122 T 13-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VEA_002355 96b568201f9128f7bc8cae1fe01e31d7 1226 SMART SM01018 658 741 1.1E-45 T 13-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VEA_002355 96b568201f9128f7bc8cae1fe01e31d7 1226 Gene3D G3DSA:3.40.50.280 745 896 3.5E-57 T 13-10-2018 VEA_002355 96b568201f9128f7bc8cae1fe01e31d7 1226 SUPERFAMILY SSF47644 654 740 3.53E-29 T 13-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VEA_002355 96b568201f9128f7bc8cae1fe01e31d7 1226 Pfam PF02310 B12 binding domain 749 842 4.4E-18 T 13-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 VEA_002355 96b568201f9128f7bc8cae1fe01e31d7 1226 SUPERFAMILY SSF56507 903 1225 1.44E-131 T 13-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VEA_002355 96b568201f9128f7bc8cae1fe01e31d7 1226 SUPERFAMILY SSF52242 746 895 6.41E-46 T 13-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 VEA_002355 96b568201f9128f7bc8cae1fe01e31d7 1226 Gene3D G3DSA:1.10.288.10 938 1094 3.0E-144 T 13-10-2018 VEA_002355 96b568201f9128f7bc8cae1fe01e31d7 1226 Gene3D G3DSA:3.20.20.330 2 339 7.1E-128 T 13-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 VEA_002355 96b568201f9128f7bc8cae1fe01e31d7 1226 PIRSF PIRSF000381 3 1197 0.0 T 13-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VEA_002355 96b568201f9128f7bc8cae1fe01e31d7 1226 Pfam PF02574 Homocysteine S-methyltransferase 18 325 4.3E-80 T 13-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 VEA_002355 96b568201f9128f7bc8cae1fe01e31d7 1226 TIGRFAM TIGR02082 metH: methionine synthase 13 1194 0.0 T 13-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VEA_002355 96b568201f9128f7bc8cae1fe01e31d7 1226 Pfam PF00809 Pterin binding enzyme 361 599 1.8E-59 T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VEA_002355 96b568201f9128f7bc8cae1fe01e31d7 1226 SUPERFAMILY SSF82282 8 400 3.14E-117 T 13-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 VEA_002355 96b568201f9128f7bc8cae1fe01e31d7 1226 Gene3D G3DSA:3.20.20.20 341 643 5.5E-130 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VEA_002355 96b568201f9128f7bc8cae1fe01e31d7 1226 Pfam PF02607 B12 binding domain 660 734 1.0E-25 T 13-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VEA_002355 96b568201f9128f7bc8cae1fe01e31d7 1226 SUPERFAMILY SSF51717 357 631 6.41E-88 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VEA_002579 3798b8aa17b9d552be41e25628556636 639 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 139 256 3.3E-14 T 13-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal VEA_002579 3798b8aa17b9d552be41e25628556636 639 Gene3D G3DSA:3.30.379.10 132 258 5.6E-20 T 13-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 VEA_002579 3798b8aa17b9d552be41e25628556636 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 283 304 7.7E-50 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VEA_002579 3798b8aa17b9d552be41e25628556636 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 402 420 7.7E-50 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VEA_002579 3798b8aa17b9d552be41e25628556636 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 217 237 7.7E-50 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VEA_002579 3798b8aa17b9d552be41e25628556636 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 254 271 7.7E-50 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VEA_002579 3798b8aa17b9d552be41e25628556636 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 353 370 7.7E-50 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VEA_002579 3798b8aa17b9d552be41e25628556636 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 424 437 7.7E-50 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VEA_002579 3798b8aa17b9d552be41e25628556636 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 589 606 7.7E-50 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VEA_002579 3798b8aa17b9d552be41e25628556636 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 571 587 7.7E-50 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VEA_002579 3798b8aa17b9d552be41e25628556636 639 SUPERFAMILY SSF51445 260 620 5.62E-129 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VEA_002579 3798b8aa17b9d552be41e25628556636 639 Gene3D G3DSA:3.20.20.80 259 636 7.8E-136 T 13-10-2018 VEA_002579 3798b8aa17b9d552be41e25628556636 639 PIRSF PIRSF001093 198 638 4.3E-95 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VEA_002579 3798b8aa17b9d552be41e25628556636 639 PIRSF PIRSF001093 114 205 210.0 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VEA_002579 3798b8aa17b9d552be41e25628556636 639 SUPERFAMILY SSF55545 125 259 9.12E-25 T 13-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 VEA_002579 3798b8aa17b9d552be41e25628556636 639 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 260 607 7.6E-120 T 13-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VEA_003733 81e05621c5ae62678cd3d3e913a7ab17 367 Pfam PF01259 SAICAR synthetase 22 293 3.1E-48 T 13-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VEA_003733 81e05621c5ae62678cd3d3e913a7ab17 367 Gene3D G3DSA:3.30.200.20 12 129 1.1E-24 T 13-10-2018 VEA_003733 81e05621c5ae62678cd3d3e913a7ab17 367 TIGRFAM TIGR02735 purC_vibrio: phosphoribosylaminoimidazole-succinocarboxamide synthase 2 366 2.1E-215 T 13-10-2018 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 VEA_003733 81e05621c5ae62678cd3d3e913a7ab17 367 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 19 342 21.59 T 13-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VEA_003733 81e05621c5ae62678cd3d3e913a7ab17 367 ProSitePatterns PS01057 SAICAR synthetase signature 1. 124 138 - T 13-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VEA_003733 81e05621c5ae62678cd3d3e913a7ab17 367 Gene3D G3DSA:3.30.470.20 130 292 1.4E-14 T 13-10-2018 VEA_003733 81e05621c5ae62678cd3d3e913a7ab17 367 SUPERFAMILY SSF56104 14 344 9.48E-68 T 13-10-2018 VEA_000535 07eb33664c6a03413ae292e2d374c904 151 Gene3D G3DSA:1.10.10.10 11 147 7.5E-30 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000535 07eb33664c6a03413ae292e2d374c904 151 Pfam PF13463 Winged helix DNA-binding domain 37 104 8.9E-11 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEA_000535 07eb33664c6a03413ae292e2d374c904 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 2.9E-14 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEA_000535 07eb33664c6a03413ae292e2d374c904 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 2.9E-14 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEA_000535 07eb33664c6a03413ae292e2d374c904 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 121 141 2.9E-14 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEA_000535 07eb33664c6a03413ae292e2d374c904 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 71 2.9E-14 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEA_000535 07eb33664c6a03413ae292e2d374c904 151 SMART SM00347 30 131 6.6E-20 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEA_000535 07eb33664c6a03413ae292e2d374c904 151 ProSitePatterns PS01117 MarR-type HTH domain signature. 70 104 - T 13-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site VEA_000535 07eb33664c6a03413ae292e2d374c904 151 SUPERFAMILY SSF46785 10 145 1.31E-29 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_003422 ca42f665244a89366fe03cd0e6c32f3d 165 SUPERFAMILY SSF54637 12 157 1.23E-15 T 13-10-2018 IPR029069 HotDog domain superfamily VEA_003422 ca42f665244a89366fe03cd0e6c32f3d 165 Pfam PF14539 Domain of unknown function (DUF4442) 18 105 2.5E-10 T 13-10-2018 IPR027961 Protein of unknown function DUF4442 VEA_003422 ca42f665244a89366fe03cd0e6c32f3d 165 Gene3D G3DSA:3.10.129.10 5 154 8.1E-26 T 13-10-2018 VEA_003079 ac2ac6ef85f1368b28eab6d99823afeb 419 Pfam PF00375 Sodium:dicarboxylate symporter family 15 403 7.9E-119 T 13-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 VEA_003079 ac2ac6ef85f1368b28eab6d99823afeb 419 SUPERFAMILY SSF118215 15 403 3.53E-110 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VEA_003079 ac2ac6ef85f1368b28eab6d99823afeb 419 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 6.8E-53 T 13-10-2018 VEA_003079 ac2ac6ef85f1368b28eab6d99823afeb 419 PRINTS PR00173 Glutamate-aspartate symporter signature 230 249 6.8E-53 T 13-10-2018 VEA_003079 ac2ac6ef85f1368b28eab6d99823afeb 419 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 6.8E-53 T 13-10-2018 VEA_003079 ac2ac6ef85f1368b28eab6d99823afeb 419 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 6.8E-53 T 13-10-2018 VEA_003079 ac2ac6ef85f1368b28eab6d99823afeb 419 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 6.8E-53 T 13-10-2018 VEA_003079 ac2ac6ef85f1368b28eab6d99823afeb 419 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 6.8E-53 T 13-10-2018 VEA_003079 ac2ac6ef85f1368b28eab6d99823afeb 419 PRINTS PR00173 Glutamate-aspartate symporter signature 48 68 6.8E-53 T 13-10-2018 VEA_003079 ac2ac6ef85f1368b28eab6d99823afeb 419 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 6.8E-53 T 13-10-2018 VEA_003079 ac2ac6ef85f1368b28eab6d99823afeb 419 PRINTS PR00173 Glutamate-aspartate symporter signature 78 103 6.8E-53 T 13-10-2018 VEA_003079 ac2ac6ef85f1368b28eab6d99823afeb 419 Gene3D G3DSA:1.10.3860.10 2 419 6.0E-118 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VEA_002846 2907acf1dda0a1231dc3927ef1525892 658 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 639 2.1E-126 T 13-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal VEA_002846 2907acf1dda0a1231dc3927ef1525892 658 Pfam PF01578 Cytochrome C assembly protein 89 297 2.4E-54 T 13-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VEA_002846 2907acf1dda0a1231dc3927ef1525892 658 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 642 2.0E-256 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEA_002846 2907acf1dda0a1231dc3927ef1525892 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 1.1E-62 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEA_002846 2907acf1dda0a1231dc3927ef1525892 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 1.1E-62 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEA_002846 2907acf1dda0a1231dc3927ef1525892 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 1.1E-62 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEA_002846 2907acf1dda0a1231dc3927ef1525892 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 632 645 1.1E-62 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEA_002846 2907acf1dda0a1231dc3927ef1525892 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 1.1E-62 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEA_002846 2907acf1dda0a1231dc3927ef1525892 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 1.1E-62 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEA_002846 2907acf1dda0a1231dc3927ef1525892 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 1.1E-62 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEA_002846 2907acf1dda0a1231dc3927ef1525892 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 2.2E-95 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEA_002846 2907acf1dda0a1231dc3927ef1525892 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 2.2E-95 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEA_002846 2907acf1dda0a1231dc3927ef1525892 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 2.2E-95 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEA_002846 2907acf1dda0a1231dc3927ef1525892 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 2.2E-95 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEA_002846 2907acf1dda0a1231dc3927ef1525892 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 2.2E-95 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEA_002846 2907acf1dda0a1231dc3927ef1525892 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 2.2E-95 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEA_002846 2907acf1dda0a1231dc3927ef1525892 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 2.2E-95 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEA_002846 2907acf1dda0a1231dc3927ef1525892 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 2.2E-95 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEA_001522 4758c68aa4a71383f0d71803fb1e3a89 117 Pfam PF11225 Protein of unknown function (DUF3024) 58 116 1.1E-18 T 13-10-2018 IPR021388 Bacteriophage 933W, L0084 VEA_002887 cbf33e2b80b31cbe078e3e137c30964a 172 SUPERFAMILY SSF111304 1 172 1.15E-60 T 13-10-2018 IPR023627 Recombination protein RecR VEA_002887 cbf33e2b80b31cbe078e3e137c30964a 172 Hamap MF_00017 Recombination protein RecR [recR]. 1 172 88.739 T 13-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 VEA_002887 cbf33e2b80b31cbe078e3e137c30964a 172 SMART SM00493 54 139 6.6E-17 T 13-10-2018 IPR006171 TOPRIM domain VEA_002887 cbf33e2b80b31cbe078e3e137c30964a 172 TIGRFAM TIGR00615 recR: recombination protein RecR 1 170 1.2E-66 T 13-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 VEA_002887 cbf33e2b80b31cbe078e3e137c30964a 172 Pfam PF02132 RecR protein 14 50 1.7E-15 T 13-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger VEA_002887 cbf33e2b80b31cbe078e3e137c30964a 172 ProSitePatterns PS01300 RecR protein signature. 30 51 - T 13-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 VEA_002887 cbf33e2b80b31cbe078e3e137c30964a 172 Pfam PF13662 Toprim domain 55 145 4.0E-23 T 13-10-2018 IPR006171 TOPRIM domain VEA_002887 cbf33e2b80b31cbe078e3e137c30964a 172 Gene3D G3DSA:3.40.1360.10 51 172 5.8E-39 T 13-10-2018 VEA_000572 27f86a14bef58b6587c4f201861bf707 218 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 18 209 1.3E-77 T 13-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VEA_000572 27f86a14bef58b6587c4f201861bf707 218 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 14 210 4.0E-75 T 13-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VEA_000572 27f86a14bef58b6587c4f201861bf707 218 Gene3D G3DSA:3.90.870.10 6 218 6.2E-87 T 13-10-2018 VEA_000572 27f86a14bef58b6587c4f201861bf707 218 SUPERFAMILY SSF55821 10 213 1.12E-80 T 13-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VEA_000572 27f86a14bef58b6587c4f201861bf707 218 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 12 214 42.08 T 13-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VEA_002732 10f2902848b64e268f67c20522749df3 419 TIGRFAM TIGR02304 aden_form_hyp: putative adenylate-forming enzyme 4 397 1.8E-109 T 13-10-2018 IPR012685 Conserved hypothetical protein CHP02304, F390 synthetase-related VEA_002732 10f2902848b64e268f67c20522749df3 419 Gene3D G3DSA:3.40.50.12780 6 322 5.5E-32 T 13-10-2018 VEA_002732 10f2902848b64e268f67c20522749df3 419 SUPERFAMILY SSF56801 153 257 3.48E-5 T 13-10-2018 VEA_003603 1bd645366d8cb57d5a00c748eac1fc3d 128 ProDom PD080544 SYNTHASE 4.2.1.- LYASE L-ECTOINE DEHYDRATASE N-ACETYLDIAMINOBUTYRATE ECTOINE ENZYME SYNTHASE:ECTOINE ECTC 1 118 2.0E-58 T 13-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 VEA_003603 1bd645366d8cb57d5a00c748eac1fc3d 128 Gene3D G3DSA:2.60.120.10 1 116 5.3E-45 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VEA_003603 1bd645366d8cb57d5a00c748eac1fc3d 128 Pfam PF06339 Ectoine synthase 1 127 3.2E-61 T 13-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 VEA_003603 1bd645366d8cb57d5a00c748eac1fc3d 128 SUPERFAMILY SSF51182 10 127 6.76E-26 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily VEA_003603 1bd645366d8cb57d5a00c748eac1fc3d 128 Hamap MF_01255 L-ectoine synthase [ectC]. 1 128 39.381 T 13-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 VEA_004463 b195528587136158a2593a3474a53ecc 784 SMART SM00448 527 638 1.7E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_004463 b195528587136158a2593a3474a53ecc 784 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 1.9E-13 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_004463 b195528587136158a2593a3474a53ecc 784 SMART SM00091 155 221 8.3E-8 T 13-10-2018 IPR000014 PAS domain VEA_004463 b195528587136158a2593a3474a53ecc 784 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 448 4.2E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_004463 b195528587136158a2593a3474a53ecc 784 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 462 4.2E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_004463 b195528587136158a2593a3474a53ecc 784 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 507 4.2E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_004463 b195528587136158a2593a3474a53ecc 784 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 488 4.2E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_004463 b195528587136158a2593a3474a53ecc 784 SUPERFAMILY SSF47226 668 782 4.32E-29 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 VEA_004463 b195528587136158a2593a3474a53ecc 784 Gene3D G3DSA:1.20.120.160 668 784 4.6E-28 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 VEA_004463 b195528587136158a2593a3474a53ecc 784 SMART SM00073 683 780 2.9E-10 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VEA_004463 b195528587136158a2593a3474a53ecc 784 Gene3D G3DSA:3.30.565.10 348 512 1.9E-43 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_004463 b195528587136158a2593a3474a53ecc 784 Gene3D G3DSA:3.40.50.2300 523 647 3.1E-27 T 13-10-2018 VEA_004463 b195528587136158a2593a3474a53ecc 784 Gene3D G3DSA:1.10.287.970 1 89 4.2E-38 T 13-10-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily VEA_004463 b195528587136158a2593a3474a53ecc 784 Gene3D G3DSA:1.10.287.130 268 345 1.7E-21 T 13-10-2018 VEA_004463 b195528587136158a2593a3474a53ecc 784 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 276 3.5E-18 T 13-10-2018 IPR000014 PAS domain VEA_004463 b195528587136158a2593a3474a53ecc 784 SUPERFAMILY SSF55874 336 506 2.23E-39 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_004463 b195528587136158a2593a3474a53ecc 784 Pfam PF00072 Response regulator receiver domain 529 638 2.9E-18 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_004463 b195528587136158a2593a3474a53ecc 784 Pfam PF08448 PAS fold 162 271 2.2E-18 T 13-10-2018 IPR013656 PAS fold-4 VEA_004463 b195528587136158a2593a3474a53ecc 784 Gene3D G3DSA:3.30.450.20 151 267 8.4E-23 T 13-10-2018 VEA_004463 b195528587136158a2593a3474a53ecc 784 PIRSF PIRSF003182 1 784 0.0 T 13-10-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 VEA_004463 b195528587136158a2593a3474a53ecc 784 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 507 5.2E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_004463 b195528587136158a2593a3474a53ecc 784 Pfam PF01627 Hpt domain 695 766 9.3E-12 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VEA_004463 b195528587136158a2593a3474a53ecc 784 SUPERFAMILY SSF55785 140 267 1.12E-25 T 13-10-2018 IPR035965 PAS domain superfamily VEA_004463 b195528587136158a2593a3474a53ecc 784 SUPERFAMILY SSF47384 270 347 2.16E-16 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEA_004463 b195528587136158a2593a3474a53ecc 784 SMART SM00388 282 347 9.8E-17 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_004463 b195528587136158a2593a3474a53ecc 784 SMART SM00387 394 510 6.0E-33 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_004463 b195528587136158a2593a3474a53ecc 784 SUPERFAMILY SSF52172 527 659 2.85E-26 T 13-10-2018 IPR011006 CheY-like superfamily VEA_001593 a7d38f73e16fd54109751796e805bbcc 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 220 3.6E-18 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEA_001593 a7d38f73e16fd54109751796e805bbcc 222 SMART SM00448 1 113 5.0E-43 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_001593 a7d38f73e16fd54109751796e805bbcc 222 Pfam PF00072 Response regulator receiver domain 3 113 5.5E-30 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_001593 a7d38f73e16fd54109751796e805bbcc 222 SMART SM00862 146 220 5.7E-16 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEA_001593 a7d38f73e16fd54109751796e805bbcc 222 SUPERFAMILY SSF46894 128 220 2.04E-14 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEA_001593 a7d38f73e16fd54109751796e805bbcc 222 Gene3D G3DSA:1.10.10.10 126 222 1.1E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001593 a7d38f73e16fd54109751796e805bbcc 222 SUPERFAMILY SSF52172 1 163 2.28E-38 T 13-10-2018 IPR011006 CheY-like superfamily VEA_001593 a7d38f73e16fd54109751796e805bbcc 222 Gene3D G3DSA:3.40.50.2300 1 124 4.6E-37 T 13-10-2018 VEA_000598 9646c0ec5e00bd215067235b2b3fee60 337 Pfam PF00294 pfkB family carbohydrate kinase 31 327 1.6E-68 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB VEA_000598 9646c0ec5e00bd215067235b2b3fee60 337 Gene3D G3DSA:3.40.1190.20 31 336 8.2E-96 T 13-10-2018 IPR029056 Ribokinase-like VEA_000598 9646c0ec5e00bd215067235b2b3fee60 337 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 273 286 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VEA_000598 9646c0ec5e00bd215067235b2b3fee60 337 PRINTS PR00990 Ribokinase signature 244 255 1.3E-5 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VEA_000598 9646c0ec5e00bd215067235b2b3fee60 337 PRINTS PR00990 Ribokinase signature 52 71 1.3E-5 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VEA_000598 9646c0ec5e00bd215067235b2b3fee60 337 PRINTS PR00990 Ribokinase signature 205 220 1.3E-5 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VEA_000598 9646c0ec5e00bd215067235b2b3fee60 337 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 57 81 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VEA_000598 9646c0ec5e00bd215067235b2b3fee60 337 SUPERFAMILY SSF53613 30 335 1.18E-82 T 13-10-2018 IPR029056 Ribokinase-like VEA_002156 cb6dc271abae159cec47df48caf924de 611 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 148 4.5E-26 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain VEA_002156 cb6dc271abae159cec47df48caf924de 611 Pfam PF00593 TonB dependent receptor 198 609 3.2E-44 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VEA_002156 cb6dc271abae159cec47df48caf924de 611 TIGRFAM TIGR01779 TonB-B12: TonB-dependent vitamin B12 receptor 1 611 1.1E-247 T 13-10-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0015420|GO:0015889|GO:0016020 VEA_002156 cb6dc271abae159cec47df48caf924de 611 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 2 611 33.226 T 13-10-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0015420|GO:0015889|GO:0016020 VEA_002156 cb6dc271abae159cec47df48caf924de 611 Gene3D G3DSA:2.40.170.20 155 611 7.2E-119 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VEA_002156 cb6dc271abae159cec47df48caf924de 611 Gene3D G3DSA:2.170.130.10 24 153 9.2E-35 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VEA_002156 cb6dc271abae159cec47df48caf924de 611 SUPERFAMILY SSF56935 29 611 9.52E-109 T 13-10-2018 VEA_002156 cb6dc271abae159cec47df48caf924de 611 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 36 - T 13-10-2018 IPR010916 TonB box, conserved site VEA_002998 e48d63e0ea9723df03773762dd2dbef6 416 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 13-10-2018 IPR018201 Beta-ketoacyl synthase, active site VEA_002998 e48d63e0ea9723df03773762dd2dbef6 416 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 370 4.3E-36 T 13-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal VEA_002998 e48d63e0ea9723df03773762dd2dbef6 416 Gene3D G3DSA:3.40.47.10 1 255 5.1E-92 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VEA_002998 e48d63e0ea9723df03773762dd2dbef6 416 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 1.1E-64 T 13-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal VEA_002998 e48d63e0ea9723df03773762dd2dbef6 416 PIRSF PIRSF000447 1 416 3.9E-203 T 13-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 VEA_002998 e48d63e0ea9723df03773762dd2dbef6 416 SMART SM00825 Beta-ketoacyl synthase 6 416 3.9E-16 T 13-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VEA_002998 e48d63e0ea9723df03773762dd2dbef6 416 Gene3D G3DSA:3.40.47.10 261 414 2.3E-52 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VEA_002998 e48d63e0ea9723df03773762dd2dbef6 416 SUPERFAMILY SSF53901 3 252 2.69E-80 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VEA_002998 e48d63e0ea9723df03773762dd2dbef6 416 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 412 7.1E-192 T 13-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 VEA_002998 e48d63e0ea9723df03773762dd2dbef6 416 SUPERFAMILY SSF53901 215 414 3.69E-67 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VEA_001878 bebbb1cf29f2209c406a9953ea0c80c2 180 SUPERFAMILY SSF53271 5 178 2.87E-34 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like VEA_001878 bebbb1cf29f2209c406a9953ea0c80c2 180 Pfam PF00156 Phosphoribosyl transferase domain 84 177 4.3E-11 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VEA_001878 bebbb1cf29f2209c406a9953ea0c80c2 180 Gene3D G3DSA:3.40.50.2020 43 180 3.4E-17 T 13-10-2018 VEA_004431 09b073b4ddda45747fd25fd130d80866 173 Pfam PF00293 NUDIX domain 7 145 6.3E-27 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VEA_004431 09b073b4ddda45747fd25fd130d80866 173 Gene3D G3DSA:3.90.79.10 1 159 7.8E-51 T 13-10-2018 VEA_004431 09b073b4ddda45747fd25fd130d80866 173 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.547 T 13-10-2018 IPR022927 RNA pyrophosphohydrolase RppH VEA_004431 09b073b4ddda45747fd25fd130d80866 173 PRINTS PR00502 NUDIX hydrolase family signature 33 47 3.4E-8 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VEA_004431 09b073b4ddda45747fd25fd130d80866 173 PRINTS PR00502 NUDIX hydrolase family signature 47 62 3.4E-8 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VEA_004431 09b073b4ddda45747fd25fd130d80866 173 SUPERFAMILY SSF55811 6 152 8.39E-32 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VEA_004431 09b073b4ddda45747fd25fd130d80866 173 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VEA_004506 c82cd0eb1478dab2bc730cd62fbeca6c 211 SUPERFAMILY SSF52833 11 110 1.47E-21 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VEA_004506 c82cd0eb1478dab2bc730cd62fbeca6c 211 Gene3D G3DSA:1.20.1050.10 89 193 6.7E-79 T 13-10-2018 VEA_004506 c82cd0eb1478dab2bc730cd62fbeca6c 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 87 1.4E-16 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VEA_004506 c82cd0eb1478dab2bc730cd62fbeca6c 211 Pfam PF00043 Glutathione S-transferase, C-terminal domain 117 194 9.1E-9 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal VEA_004506 c82cd0eb1478dab2bc730cd62fbeca6c 211 SUPERFAMILY SSF47616 82 208 1.25E-23 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VEA_004506 c82cd0eb1478dab2bc730cd62fbeca6c 211 Gene3D G3DSA:3.40.30.10 11 202 6.7E-79 T 13-10-2018 VEA_002686 c8190d27bdc417350de1e9bb62708b92 715 Gene3D G3DSA:3.40.50.300 582 702 1.1E-25 T 13-10-2018 VEA_002686 c8190d27bdc417350de1e9bb62708b92 715 Gene3D G3DSA:3.40.50.300 459 581 1.3E-27 T 13-10-2018 VEA_002686 c8190d27bdc417350de1e9bb62708b92 715 SUPERFAMILY SSF52540 20 454 4.01E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002686 c8190d27bdc417350de1e9bb62708b92 715 Gene3D G3DSA:1.10.10.1020 13 134 5.2E-23 T 13-10-2018 VEA_002686 c8190d27bdc417350de1e9bb62708b92 715 Gene3D G3DSA:3.40.50.300 216 449 1.9E-75 T 13-10-2018 VEA_002686 c8190d27bdc417350de1e9bb62708b92 715 SUPERFAMILY SSF52540 374 713 7.17E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002686 c8190d27bdc417350de1e9bb62708b92 715 Pfam PF13604 AAA domain 248 409 2.1E-30 T 13-10-2018 VEA_002686 c8190d27bdc417350de1e9bb62708b92 715 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 18 713 3.9E-217 T 13-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 VEA_002686 c8190d27bdc417350de1e9bb62708b92 715 Pfam PF13538 UvrD-like helicase C-terminal domain 642 688 1.2E-14 T 13-10-2018 IPR027785 UvrD-like helicase C-terminal domain VEA_002686 c8190d27bdc417350de1e9bb62708b92 715 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 27 711 50.069 T 13-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 VEA_001760 929565c615e77682f77ca736c97f36d1 256 ProSitePatterns PS00171 Triosephosphate isomerase active site. 167 177 - T 13-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_001760 929565c615e77682f77ca736c97f36d1 256 SUPERFAMILY SSF51351 2 250 6.54E-89 T 13-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_001760 929565c615e77682f77ca736c97f36d1 256 Pfam PF00121 Triosephosphate isomerase 5 247 3.1E-87 T 13-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_001760 929565c615e77682f77ca736c97f36d1 256 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 250 59.321 T 13-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_001760 929565c615e77682f77ca736c97f36d1 256 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 241 4.7E-78 T 13-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_001760 929565c615e77682f77ca736c97f36d1 256 Gene3D G3DSA:3.20.20.70 1 256 4.3E-100 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_002178 73011270289f4ff1e484be3f4b24fd2c 190 SMART SM00987 27 183 1.6E-31 T 13-10-2018 VEA_002178 73011270289f4ff1e484be3f4b24fd2c 190 SUPERFAMILY SSF52141 2 189 1.28E-58 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VEA_002178 73011270289f4ff1e484be3f4b24fd2c 190 Pfam PF03167 Uracil DNA glycosylase superfamily 31 179 2.0E-26 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VEA_002178 73011270289f4ff1e484be3f4b24fd2c 190 Gene3D G3DSA:3.40.470.10 1 190 3.4E-75 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VEA_002178 73011270289f4ff1e484be3f4b24fd2c 190 SMART SM00986 27 183 1.6E-31 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VEA_000460 f0bb6c67b680774cfffdcd499a106bfe 332 SUPERFAMILY SSF52518 15 328 1.14E-78 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VEA_000460 f0bb6c67b680774cfffdcd499a106bfe 332 Gene3D G3DSA:3.40.50.970 22 203 7.0E-26 T 13-10-2018 VEA_000460 f0bb6c67b680774cfffdcd499a106bfe 332 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 52 199 2.5E-31 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VEA_004362 24a432eae80416964e4d16ba9dbc80f6 239 PIRSF PIRSF004808 1 239 2.0E-72 T 13-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 VEA_004362 24a432eae80416964e4d16ba9dbc80f6 239 Pfam PF00588 SpoU rRNA Methylase family 5 153 1.3E-34 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VEA_004362 24a432eae80416964e4d16ba9dbc80f6 239 Gene3D G3DSA:3.40.1280.10 1 163 1.2E-62 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VEA_004362 24a432eae80416964e4d16ba9dbc80f6 239 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 238 6.9E-84 T 13-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 VEA_004362 24a432eae80416964e4d16ba9dbc80f6 239 SUPERFAMILY SSF75217 5 172 4.45E-37 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases VEA_004362 24a432eae80416964e4d16ba9dbc80f6 239 Gene3D G3DSA:1.10.8.590 173 239 3.1E-28 T 13-10-2018 VEA_002419 50fcdfad2ca97cfdc6425f1acdd869e8 309 Gene3D G3DSA:3.40.50.1370 8 304 2.2E-121 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VEA_002419 50fcdfad2ca97cfdc6425f1acdd869e8 309 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 6.9E-33 T 13-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 VEA_002419 50fcdfad2ca97cfdc6425f1acdd869e8 309 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VEA_002419 50fcdfad2ca97cfdc6425f1acdd869e8 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 3.7E-37 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VEA_002419 50fcdfad2ca97cfdc6425f1acdd869e8 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 3.7E-37 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VEA_002419 50fcdfad2ca97cfdc6425f1acdd869e8 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 3.7E-37 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VEA_002419 50fcdfad2ca97cfdc6425f1acdd869e8 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 3.7E-37 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VEA_002419 50fcdfad2ca97cfdc6425f1acdd869e8 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 3.7E-37 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VEA_002419 50fcdfad2ca97cfdc6425f1acdd869e8 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 3.7E-37 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VEA_002419 50fcdfad2ca97cfdc6425f1acdd869e8 309 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 39.063 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VEA_002419 50fcdfad2ca97cfdc6425f1acdd869e8 309 SUPERFAMILY SSF53671 4 307 6.81E-103 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VEA_002419 50fcdfad2ca97cfdc6425f1acdd869e8 309 Gene3D G3DSA:3.40.50.1370 135 292 2.2E-121 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VEA_002419 50fcdfad2ca97cfdc6425f1acdd869e8 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 1.2E-26 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VEA_002419 50fcdfad2ca97cfdc6425f1acdd869e8 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 1.2E-26 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VEA_002419 50fcdfad2ca97cfdc6425f1acdd869e8 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 1.2E-26 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VEA_002419 50fcdfad2ca97cfdc6425f1acdd869e8 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 1.2E-26 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VEA_002419 50fcdfad2ca97cfdc6425f1acdd869e8 309 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 3.7E-117 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VEA_002419 50fcdfad2ca97cfdc6425f1acdd869e8 309 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 1.7E-45 T 13-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 VEA_001430 6a3ff081e33e474db88a6b9d5239e777 295 SUPERFAMILY SSF46785 8 88 6.91E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_001430 6a3ff081e33e474db88a6b9d5239e777 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.4E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_001430 6a3ff081e33e474db88a6b9d5239e777 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.4E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_001430 6a3ff081e33e474db88a6b9d5239e777 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.4E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_001430 6a3ff081e33e474db88a6b9d5239e777 295 Gene3D G3DSA:3.40.190.10 92 286 3.9E-41 T 13-10-2018 VEA_001430 6a3ff081e33e474db88a6b9d5239e777 295 Gene3D G3DSA:3.40.190.10 164 261 3.9E-41 T 13-10-2018 VEA_001430 6a3ff081e33e474db88a6b9d5239e777 295 Gene3D G3DSA:1.10.10.10 3 89 1.8E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001430 6a3ff081e33e474db88a6b9d5239e777 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 1.5E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_001430 6a3ff081e33e474db88a6b9d5239e777 295 SUPERFAMILY SSF53850 89 291 2.17E-28 T 13-10-2018 VEA_001430 6a3ff081e33e474db88a6b9d5239e777 295 Pfam PF03466 LysR substrate binding domain 88 289 1.5E-27 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_002191 3b495abb2e774f038672772d30d69c54 523 Pfam PF00005 ABC transporter 339 465 1.7E-20 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_002191 3b495abb2e774f038672772d30d69c54 523 Pfam PF00005 ABC transporter 19 188 2.5E-25 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_002191 3b495abb2e774f038672772d30d69c54 523 SMART SM00382 28 235 8.7E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_002191 3b495abb2e774f038672772d30d69c54 523 SMART SM00382 345 511 6.7E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_002191 3b495abb2e774f038672772d30d69c54 523 SUPERFAMILY SSF52540 8 238 1.95E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002191 3b495abb2e774f038672772d30d69c54 523 ProSitePatterns PS00211 ABC transporters family signature. 438 452 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_002191 3b495abb2e774f038672772d30d69c54 523 Gene3D G3DSA:3.40.50.300 285 522 5.4E-42 T 13-10-2018 VEA_002191 3b495abb2e774f038672772d30d69c54 523 Gene3D G3DSA:3.40.50.300 2 280 6.2E-64 T 13-10-2018 VEA_002191 3b495abb2e774f038672772d30d69c54 523 SUPERFAMILY SSF52540 335 507 1.24E-36 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002191 3b495abb2e774f038672772d30d69c54 523 Pfam PF12848 ABC transporter 228 304 2.6E-16 T 13-10-2018 IPR032781 ABC-transporter extension domain VEA_002177 7bbcba46ae88b353c9434ca0392f5900 355 SUPERFAMILY SSF51726 1 354 2.09E-123 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VEA_002177 7bbcba46ae88b353c9434ca0392f5900 355 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 350 50.824 T 13-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 VEA_002177 7bbcba46ae88b353c9434ca0392f5900 355 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 VEA_002177 7bbcba46ae88b353c9434ca0392f5900 355 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 348 3.8E-140 T 13-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 VEA_002177 7bbcba46ae88b353c9434ca0392f5900 355 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 348 6.0E-142 T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 VEA_002177 7bbcba46ae88b353c9434ca0392f5900 355 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 VEA_002177 7bbcba46ae88b353c9434ca0392f5900 355 Gene3D G3DSA:3.20.20.210 1 355 8.4E-160 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VEA_001799 f15b1c638445d092c1a00db447f4e830 217 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 172 200 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VEA_001799 f15b1c638445d092c1a00db447f4e830 217 SUPERFAMILY SSF51161 4 207 3.19E-41 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily VEA_001799 f15b1c638445d092c1a00db447f4e830 217 Gene3D G3DSA:3.40.50.20 2 96 1.5E-9 T 13-10-2018 VEA_001799 f15b1c638445d092c1a00db447f4e830 217 Gene3D G3DSA:2.160.10.10 98 206 1.0E-25 T 13-10-2018 VEA_001799 f15b1c638445d092c1a00db447f4e830 217 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 9 207 1.2E-57 T 13-10-2018 IPR020019 Sialic acid O-acyltransferase NeuD-like VEA_001799 f15b1c638445d092c1a00db447f4e830 217 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 165 197 2.7E-8 T 13-10-2018 IPR001451 Hexapeptide repeat VEA_003647 ec265c3a503c5793719aa44f98c10b0a 148 SUPERFAMILY SSF54909 9 113 2.91E-14 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel VEA_003647 ec265c3a503c5793719aa44f98c10b0a 148 Pfam PF11695 Domain of unknown function (DUF3291) 3 140 1.3E-56 T 13-10-2018 IPR021708 Domain of unknown function DUF3291 VEA_003011 0a61c6b8abd892c02cc01e9f8e65f2c2 480 SUPERFAMILY SSF51621 4 344 1.29E-86 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VEA_003011 0a61c6b8abd892c02cc01e9f8e65f2c2 480 SUPERFAMILY SSF52935 329 479 2.49E-37 T 13-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEA_003011 0a61c6b8abd892c02cc01e9f8e65f2c2 480 PRINTS PR01050 Pyruvate kinase family signature 63 79 1.4E-53 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEA_003011 0a61c6b8abd892c02cc01e9f8e65f2c2 480 PRINTS PR01050 Pyruvate kinase family signature 300 318 1.4E-53 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEA_003011 0a61c6b8abd892c02cc01e9f8e65f2c2 480 PRINTS PR01050 Pyruvate kinase family signature 319 335 1.4E-53 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEA_003011 0a61c6b8abd892c02cc01e9f8e65f2c2 480 PRINTS PR01050 Pyruvate kinase family signature 190 204 1.4E-53 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEA_003011 0a61c6b8abd892c02cc01e9f8e65f2c2 480 PRINTS PR01050 Pyruvate kinase family signature 250 274 1.4E-53 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEA_003011 0a61c6b8abd892c02cc01e9f8e65f2c2 480 PRINTS PR01050 Pyruvate kinase family signature 223 249 1.4E-53 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEA_003011 0a61c6b8abd892c02cc01e9f8e65f2c2 480 PRINTS PR01050 Pyruvate kinase family signature 275 299 1.4E-53 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEA_003011 0a61c6b8abd892c02cc01e9f8e65f2c2 480 Gene3D G3DSA:3.40.1380.20 342 476 3.3E-154 T 13-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEA_003011 0a61c6b8abd892c02cc01e9f8e65f2c2 480 Gene3D G3DSA:2.40.33.10 74 172 3.3E-154 T 13-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEA_003011 0a61c6b8abd892c02cc01e9f8e65f2c2 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 478 8.3E-29 T 13-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEA_003011 0a61c6b8abd892c02cc01e9f8e65f2c2 480 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 13-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEA_003011 0a61c6b8abd892c02cc01e9f8e65f2c2 480 Gene3D G3DSA:3.20.20.60 6 341 3.3E-154 T 13-10-2018 VEA_003011 0a61c6b8abd892c02cc01e9f8e65f2c2 480 Pfam PF00224 Pyruvate kinase, barrel domain 6 345 1.0E-129 T 13-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEA_003011 0a61c6b8abd892c02cc01e9f8e65f2c2 480 SUPERFAMILY SSF50800 74 169 1.1E-26 T 13-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily VEA_003011 0a61c6b8abd892c02cc01e9f8e65f2c2 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 478 3.4E-168 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VEA_000634 913176a5346bee4ac6fe62fde05a7297 337 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 38 316 2.2E-69 T 13-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VEA_000634 913176a5346bee4ac6fe62fde05a7297 337 Gene3D G3DSA:3.40.190.170 27 334 9.1E-92 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VEA_002842 a75fdb75369cb969e2f4ee6539069431 222 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 8 218 1.1E-91 T 13-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria VEA_002842 a75fdb75369cb969e2f4ee6539069431 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 7.3E-70 T 13-10-2018 VEA_002842 a75fdb75369cb969e2f4ee6539069431 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 103 121 7.3E-70 T 13-10-2018 VEA_002842 a75fdb75369cb969e2f4ee6539069431 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 7.3E-70 T 13-10-2018 VEA_002842 a75fdb75369cb969e2f4ee6539069431 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 158 177 7.3E-70 T 13-10-2018 VEA_002842 a75fdb75369cb969e2f4ee6539069431 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 7.3E-70 T 13-10-2018 VEA_002842 a75fdb75369cb969e2f4ee6539069431 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 195 218 7.3E-70 T 13-10-2018 VEA_002842 a75fdb75369cb969e2f4ee6539069431 222 Pfam PF03379 CcmB protein 5 219 9.1E-90 T 13-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEA_002842 a75fdb75369cb969e2f4ee6539069431 222 PIRSF PIRSF002764 1 222 2.5E-83 T 13-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria VEA_001218 268e4b75e6d9431dff133a62a72ae0e2 804 Gene3D G3DSA:2.60.40.2610 622 710 6.3E-7 T 13-10-2018 VEA_001218 268e4b75e6d9431dff133a62a72ae0e2 804 Pfam PF00577 Outer membrane usher protein 234 691 2.4E-32 T 13-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 VEA_001218 268e4b75e6d9431dff133a62a72ae0e2 804 Gene3D G3DSA:2.60.40.3110 242 330 1.1E-8 T 13-10-2018 VEA_001619 35c3d93e3d6a06ae5f76925b811db4ec 271 Pfam PF00561 alpha/beta hydrolase fold 23 128 5.4E-18 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEA_001619 35c3d93e3d6a06ae5f76925b811db4ec 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 3.7E-9 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEA_001619 35c3d93e3d6a06ae5f76925b811db4ec 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 90 103 3.7E-9 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEA_001619 35c3d93e3d6a06ae5f76925b811db4ec 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 212 226 3.7E-9 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEA_001619 35c3d93e3d6a06ae5f76925b811db4ec 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 45 60 3.7E-9 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEA_001619 35c3d93e3d6a06ae5f76925b811db4ec 271 SUPERFAMILY SSF53474 3 268 1.67E-59 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_001619 35c3d93e3d6a06ae5f76925b811db4ec 271 PRINTS PR00412 Epoxide hydrolase signature 104 117 2.1E-7 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VEA_001619 35c3d93e3d6a06ae5f76925b811db4ec 271 PRINTS PR00412 Epoxide hydrolase signature 243 265 2.1E-7 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VEA_001619 35c3d93e3d6a06ae5f76925b811db4ec 271 PRINTS PR00412 Epoxide hydrolase signature 45 60 2.1E-7 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VEA_001619 35c3d93e3d6a06ae5f76925b811db4ec 271 Gene3D G3DSA:3.40.50.1820 1 271 3.3E-53 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_003772 adb1b7f42addaba3c53711efdb2068bb 458 TIGRFAM TIGR00797 matE: MATE efflux family protein 25 417 1.5E-58 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEA_003772 adb1b7f42addaba3c53711efdb2068bb 458 Pfam PF01554 MatE 25 185 6.3E-25 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEA_003772 adb1b7f42addaba3c53711efdb2068bb 458 Pfam PF01554 MatE 252 413 1.8E-19 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEA_003772 adb1b7f42addaba3c53711efdb2068bb 458 PIRSF PIRSF006603 10 458 6.3E-65 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEA_001656 86e9cba08cb5cb1e8129855171d162a2 515 Gene3D G3DSA:3.30.160.270 394 500 3.9E-7 T 13-10-2018 VEA_001656 86e9cba08cb5cb1e8129855171d162a2 515 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 508 42.471 T 13-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VEA_001656 86e9cba08cb5cb1e8129855171d162a2 515 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 13-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VEA_001656 86e9cba08cb5cb1e8129855171d162a2 515 Pfam PF00682 HMGL-like 4 273 3.6E-101 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 VEA_001656 86e9cba08cb5cb1e8129855171d162a2 515 Gene3D G3DSA:1.10.238.260 280 393 5.4E-32 T 13-10-2018 VEA_001656 86e9cba08cb5cb1e8129855171d162a2 515 SUPERFAMILY SSF110921 393 498 4.45E-21 T 13-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VEA_001656 86e9cba08cb5cb1e8129855171d162a2 515 Gene3D G3DSA:3.20.20.70 1 277 1.2E-106 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_001656 86e9cba08cb5cb1e8129855171d162a2 515 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 498 4.0E-30 T 13-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VEA_001656 86e9cba08cb5cb1e8129855171d162a2 515 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 13-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VEA_001656 86e9cba08cb5cb1e8129855171d162a2 515 SMART SM00917 369 499 6.8E-28 T 13-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VEA_001656 86e9cba08cb5cb1e8129855171d162a2 515 SUPERFAMILY SSF51569 1 291 2.05E-100 T 13-10-2018 VEA_001656 86e9cba08cb5cb1e8129855171d162a2 515 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 496 1.1E-238 T 13-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VEA_001015 4d286071682a1d7ac631293822b26bda 184 Gene3D G3DSA:3.30.450.20 2 73 1.1E-5 T 13-10-2018 VEA_001015 4d286071682a1d7ac631293822b26bda 184 SMART SM00421 101 158 4.5E-6 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_001015 4d286071682a1d7ac631293822b26bda 184 SUPERFAMILY SSF46894 93 163 1.46E-13 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEA_001015 4d286071682a1d7ac631293822b26bda 184 Pfam PF08448 PAS fold 6 69 3.8E-11 T 13-10-2018 IPR013656 PAS fold-4 VEA_001015 4d286071682a1d7ac631293822b26bda 184 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 118 134 1.9E-6 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_001015 4d286071682a1d7ac631293822b26bda 184 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 104 118 1.9E-6 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_001015 4d286071682a1d7ac631293822b26bda 184 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 134 146 1.9E-6 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_001015 4d286071682a1d7ac631293822b26bda 184 Gene3D G3DSA:1.10.10.10 95 162 9.3E-14 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001015 4d286071682a1d7ac631293822b26bda 184 Pfam PF00196 Bacterial regulatory proteins, luxR family 103 158 3.7E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_001317 b6be3713fad01f9bf9a2b3a290f72ff6 435 Pfam PF01943 Polysaccharide biosynthesis protein 19 296 4.4E-9 T 13-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 VEA_001317 b6be3713fad01f9bf9a2b3a290f72ff6 435 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 349 432 6.4E-7 T 13-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain VEA_002545 c95c0135ef7125cfe7739c4c1bb18ade 561 Gene3D G3DSA:3.30.300.160 62 140 6.4E-8 T 13-10-2018 VEA_002545 c95c0135ef7125cfe7739c4c1bb18ade 561 Pfam PF00437 Type II/IV secretion system protein 188 455 4.7E-87 T 13-10-2018 IPR001482 Type II/IV secretion system protein VEA_002545 c95c0135ef7125cfe7739c4c1bb18ade 561 SUPERFAMILY SSF52540 173 558 1.08E-91 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002545 c95c0135ef7125cfe7739c4c1bb18ade 561 Gene3D G3DSA:3.40.50.300 290 560 3.4E-102 T 13-10-2018 VEA_002545 c95c0135ef7125cfe7739c4c1bb18ade 561 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 38 143 2.0E-16 T 13-10-2018 IPR007831 General secretory system II, protein E, N-terminal VEA_002545 c95c0135ef7125cfe7739c4c1bb18ade 561 Gene3D G3DSA:3.30.450.90 152 288 2.3E-46 T 13-10-2018 VEA_002545 c95c0135ef7125cfe7739c4c1bb18ade 561 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 383 397 - T 13-10-2018 IPR001482 Type II/IV secretion system protein VEA_002545 c95c0135ef7125cfe7739c4c1bb18ade 561 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 5 558 1.8E-237 T 13-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 VEA_002545 c95c0135ef7125cfe7739c4c1bb18ade 561 SUPERFAMILY SSF160246 1 140 3.66E-31 T 13-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily VEA_000578 215300daa57f39537bd33514a64fa3f4 98 Gene3D G3DSA:2.60.40.10 6 95 2.9E-17 T 13-10-2018 IPR013783 Immunoglobulin-like fold VEA_000578 215300daa57f39537bd33514a64fa3f4 98 SUPERFAMILY SSF81296 11 95 2.29E-14 T 13-10-2018 IPR014756 Immunoglobulin E-set VEA_000578 215300daa57f39537bd33514a64fa3f4 98 SMART SM01065 12 93 0.0039 T 13-10-2018 IPR002044 Carbohydrate binding module family 20 GO:2001070 VEA_004457 edd8b1c310805dff77a3cfca6cba62ef 819 Gene3D G3DSA:3.40.50.720 467 811 2.0E-120 T 13-10-2018 VEA_004457 edd8b1c310805dff77a3cfca6cba62ef 819 SUPERFAMILY SSF53633 1 298 1.73E-77 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VEA_004457 edd8b1c310805dff77a3cfca6cba62ef 819 Pfam PF00742 Homoserine dehydrogenase 614 810 3.9E-47 T 13-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 VEA_004457 edd8b1c310805dff77a3cfca6cba62ef 819 Gene3D G3DSA:1.20.120.1320 41 142 1.9E-87 T 13-10-2018 VEA_004457 edd8b1c310805dff77a3cfca6cba62ef 819 SUPERFAMILY SSF55347 614 797 1.77E-51 T 13-10-2018 VEA_004457 edd8b1c310805dff77a3cfca6cba62ef 819 Pfam PF01842 ACT domain 324 379 6.6E-10 T 13-10-2018 IPR002912 ACT domain VEA_004457 edd8b1c310805dff77a3cfca6cba62ef 819 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 13-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VEA_004457 edd8b1c310805dff77a3cfca6cba62ef 819 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 13-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 VEA_004457 edd8b1c310805dff77a3cfca6cba62ef 819 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 3.1E-133 T 13-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VEA_004457 edd8b1c310805dff77a3cfca6cba62ef 819 SUPERFAMILY SSF51735 463 636 1.72E-37 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_004457 edd8b1c310805dff77a3cfca6cba62ef 819 PIRSF PIRSF000727 1 817 0.0 T 13-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VEA_004457 edd8b1c310805dff77a3cfca6cba62ef 819 Gene3D G3DSA:3.40.1160.10 3 295 1.9E-87 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VEA_004457 edd8b1c310805dff77a3cfca6cba62ef 819 Gene3D G3DSA:3.30.2130.10 302 464 3.6E-46 T 13-10-2018 VEA_004457 edd8b1c310805dff77a3cfca6cba62ef 819 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 606 6.2E-27 T 13-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 VEA_004457 edd8b1c310805dff77a3cfca6cba62ef 819 Pfam PF13840 ACT domain 393 456 1.6E-7 T 13-10-2018 IPR027795 CASTOR, ACT domain VEA_004457 edd8b1c310805dff77a3cfca6cba62ef 819 SUPERFAMILY SSF55021 303 381 1.15E-22 T 13-10-2018 VEA_004457 edd8b1c310805dff77a3cfca6cba62ef 819 Gene3D G3DSA:3.30.360.10 625 795 2.0E-120 T 13-10-2018 VEA_004457 edd8b1c310805dff77a3cfca6cba62ef 819 Pfam PF00696 Amino acid kinase family 2 284 9.5E-52 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VEA_004457 edd8b1c310805dff77a3cfca6cba62ef 819 SUPERFAMILY SSF55021 383 476 4.3E-22 T 13-10-2018 VEA_002163 7f3ff5551e830ea959a3c2f65efe7ca4 321 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 8 318 32.462 T 13-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 VEA_002163 7f3ff5551e830ea959a3c2f65efe7ca4 321 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 82 318 4.1E-65 T 13-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VEA_002163 7f3ff5551e830ea959a3c2f65efe7ca4 321 Pfam PF03099 Biotin/lipoate A/B protein ligase family 84 208 3.1E-21 T 13-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 VEA_002163 7f3ff5551e830ea959a3c2f65efe7ca4 321 Pfam PF08279 HTH domain 9 60 2.1E-13 T 13-10-2018 IPR013196 Helix-turn-helix, type 11 VEA_002163 7f3ff5551e830ea959a3c2f65efe7ca4 321 Gene3D G3DSA:1.10.10.10 2 65 2.4E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_002163 7f3ff5551e830ea959a3c2f65efe7ca4 321 SUPERFAMILY SSF55681 71 269 3.73E-59 T 13-10-2018 VEA_002163 7f3ff5551e830ea959a3c2f65efe7ca4 321 SUPERFAMILY SSF50037 272 318 2.43E-10 T 13-10-2018 IPR008988 Transcriptional repressor, C-terminal VEA_002163 7f3ff5551e830ea959a3c2f65efe7ca4 321 Pfam PF02237 Biotin protein ligase C terminal domain 272 318 3.1E-9 T 13-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VEA_002163 7f3ff5551e830ea959a3c2f65efe7ca4 321 Gene3D G3DSA:2.30.30.100 272 314 4.8E-18 T 13-10-2018 VEA_002163 7f3ff5551e830ea959a3c2f65efe7ca4 321 Gene3D G3DSA:3.30.930.10 67 271 2.3E-65 T 13-10-2018 VEA_002163 7f3ff5551e830ea959a3c2f65efe7ca4 321 SUPERFAMILY SSF46785 6 61 1.54E-12 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_004371 0581878f80d5325c263fe63e4f9c7aab 437 SUPERFAMILY SSF51621 6 437 1.66E-153 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VEA_004371 0581878f80d5325c263fe63e4f9c7aab 437 PIRSF PIRSF001362 1 437 9.3E-224 T 13-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 VEA_004371 0581878f80d5325c263fe63e4f9c7aab 437 Pfam PF00463 Isocitrate lyase family 15 258 8.4E-63 T 13-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 VEA_004371 0581878f80d5325c263fe63e4f9c7aab 437 Pfam PF00463 Isocitrate lyase family 259 437 4.3E-53 T 13-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 VEA_004371 0581878f80d5325c263fe63e4f9c7aab 437 ProSitePatterns PS00161 Isocitrate lyase signature. 196 201 - T 13-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 VEA_004371 0581878f80d5325c263fe63e4f9c7aab 437 Gene3D G3DSA:3.20.20.60 2 420 2.5E-183 T 13-10-2018 VEA_004371 0581878f80d5325c263fe63e4f9c7aab 437 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 11 258 4.4E-115 T 13-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 VEA_004371 0581878f80d5325c263fe63e4f9c7aab 437 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 259 437 3.0E-90 T 13-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 VEA_004247 70517a5b587bb803fd354680b863a03e 458 Gene3D G3DSA:3.30.1850.10 1 120 1.1E-56 T 13-10-2018 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 VEA_004247 70517a5b587bb803fd354680b863a03e 458 Pfam PF03641 Possible lysine decarboxylase 187 326 1.5E-35 T 13-10-2018 IPR031100 LOG family VEA_004247 70517a5b587bb803fd354680b863a03e 458 Gene3D G3DSA:3.40.50.450 121 450 1.7E-124 T 13-10-2018 VEA_004247 70517a5b587bb803fd354680b863a03e 458 Pfam PF11892 Domain of unknown function (DUF3412) 330 450 1.8E-56 T 13-10-2018 IPR021826 Domain of unknown function DUF3412 KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 VEA_004247 70517a5b587bb803fd354680b863a03e 458 Pfam PF14793 Domain of unknown function (DUF4478) 4 109 3.4E-50 T 13-10-2018 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 VEA_004247 70517a5b587bb803fd354680b863a03e 458 SUPERFAMILY SSF102405 120 327 1.53E-41 T 13-10-2018 VEA_002677 e529a1dc396cb288a08012348088119c 454 Gene3D G3DSA:1.20.1250.20 18 227 4.6E-58 T 13-10-2018 VEA_002677 e529a1dc396cb288a08012348088119c 454 Pfam PF07690 Major Facilitator Superfamily 34 401 2.8E-50 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEA_002677 e529a1dc396cb288a08012348088119c 454 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 13-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 VEA_002677 e529a1dc396cb288a08012348088119c 454 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 418 2.2E-151 T 13-10-2018 VEA_002677 e529a1dc396cb288a08012348088119c 454 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 439 7.1E-235 T 13-10-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 VEA_002677 e529a1dc396cb288a08012348088119c 454 PIRSF PIRSF002808 5 452 1.1E-169 T 13-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 VEA_002677 e529a1dc396cb288a08012348088119c 454 Gene3D G3DSA:1.20.1250.20 241 452 1.3E-62 T 13-10-2018 VEA_002677 e529a1dc396cb288a08012348088119c 454 SUPERFAMILY SSF103473 16 450 1.7E-86 T 13-10-2018 IPR036259 MFS transporter superfamily VEA_003950 60108145d2512b73d836eedb62438562 82 Pfam PF10692 Protein of unknown function (DUF2498) 4 80 5.1E-42 T 13-10-2018 IPR019633 Protein of unknown function DUF2498 VEA_003950 60108145d2512b73d836eedb62438562 82 Gene3D G3DSA:1.10.1900.30 8 76 9.2E-36 T 13-10-2018 IPR038191 YciN superfamily VEA_003720 c6c4c7d2cd46e5f56b9f3fe556c1c678 416 TIGRFAM TIGR01224 hutI: imidazolonepropionase 26 409 4.9E-151 T 13-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VEA_003720 c6c4c7d2cd46e5f56b9f3fe556c1c678 416 Hamap MF_00372 Imidazolonepropionase [hutI]. 2 411 41.423 T 13-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VEA_003720 c6c4c7d2cd46e5f56b9f3fe556c1c678 416 Pfam PF01979 Amidohydrolase family 69 409 8.4E-17 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VEA_003720 c6c4c7d2cd46e5f56b9f3fe556c1c678 416 SUPERFAMILY SSF51556 72 372 1.54E-82 T 13-10-2018 IPR032466 Metal-dependent hydrolase VEA_003720 c6c4c7d2cd46e5f56b9f3fe556c1c678 416 Gene3D G3DSA:2.30.40.10 7 408 4.8E-159 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VEA_003720 c6c4c7d2cd46e5f56b9f3fe556c1c678 416 SUPERFAMILY SSF51338 1 412 5.48E-24 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VEA_003720 c6c4c7d2cd46e5f56b9f3fe556c1c678 416 Gene3D G3DSA:3.20.20.140 73 371 4.8E-159 T 13-10-2018 VEA_004517 de0eedfae8a07496bace57ce685fb413 553 Gene3D G3DSA:3.30.230.10 144 316 4.1E-58 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VEA_004517 de0eedfae8a07496bace57ce685fb413 553 Pfam PF01751 Toprim domain 340 448 7.3E-12 T 13-10-2018 IPR006171 TOPRIM domain VEA_004517 de0eedfae8a07496bace57ce685fb413 553 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 1 550 4.2E-293 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VEA_004517 de0eedfae8a07496bace57ce685fb413 553 Gene3D G3DSA:3.40.50.670 317 548 4.3E-93 T 13-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VEA_004517 de0eedfae8a07496bace57ce685fb413 553 SUPERFAMILY SSF55874 1 142 9.03E-39 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_004517 de0eedfae8a07496bace57ce685fb413 553 Pfam PF00204 DNA gyrase B 145 311 1.6E-42 T 13-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VEA_004517 de0eedfae8a07496bace57ce685fb413 553 Gene3D G3DSA:3.30.565.10 1 143 7.6E-45 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_004517 de0eedfae8a07496bace57ce685fb413 553 PRINTS PR00418 DNA topoisomerase II family signature 193 206 7.5E-47 T 13-10-2018 VEA_004517 de0eedfae8a07496bace57ce685fb413 553 PRINTS PR00418 DNA topoisomerase II family signature 406 422 7.5E-47 T 13-10-2018 VEA_004517 de0eedfae8a07496bace57ce685fb413 553 PRINTS PR00418 DNA topoisomerase II family signature 444 456 7.5E-47 T 13-10-2018 VEA_004517 de0eedfae8a07496bace57ce685fb413 553 PRINTS PR00418 DNA topoisomerase II family signature 36 50 7.5E-47 T 13-10-2018 VEA_004517 de0eedfae8a07496bace57ce685fb413 553 PRINTS PR00418 DNA topoisomerase II family signature 341 355 7.5E-47 T 13-10-2018 VEA_004517 de0eedfae8a07496bace57ce685fb413 553 PRINTS PR00418 DNA topoisomerase II family signature 424 441 7.5E-47 T 13-10-2018 VEA_004517 de0eedfae8a07496bace57ce685fb413 553 PRINTS PR00418 DNA topoisomerase II family signature 487 503 7.5E-47 T 13-10-2018 VEA_004517 de0eedfae8a07496bace57ce685fb413 553 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 483 545 9.7E-27 T 13-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VEA_004517 de0eedfae8a07496bace57ce685fb413 553 SUPERFAMILY SSF56719 315 546 5.23E-80 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VEA_004517 de0eedfae8a07496bace57ce685fb413 553 SMART SM00433 1 549 1.4E-174 T 13-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VEA_004517 de0eedfae8a07496bace57ce685fb413 553 PRINTS PR01098 Topoisomerase IV subunit B signature 76 91 1.3E-121 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VEA_004517 de0eedfae8a07496bace57ce685fb413 553 PRINTS PR01098 Topoisomerase IV subunit B signature 375 396 1.3E-121 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VEA_004517 de0eedfae8a07496bace57ce685fb413 553 PRINTS PR01098 Topoisomerase IV subunit B signature 430 446 1.3E-121 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VEA_004517 de0eedfae8a07496bace57ce685fb413 553 PRINTS PR01098 Topoisomerase IV subunit B signature 119 140 1.3E-121 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VEA_004517 de0eedfae8a07496bace57ce685fb413 553 PRINTS PR01098 Topoisomerase IV subunit B signature 221 237 1.3E-121 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VEA_004517 de0eedfae8a07496bace57ce685fb413 553 PRINTS PR01098 Topoisomerase IV subunit B signature 509 523 1.3E-121 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VEA_004517 de0eedfae8a07496bace57ce685fb413 553 PRINTS PR01098 Topoisomerase IV subunit B signature 464 486 1.3E-121 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VEA_004517 de0eedfae8a07496bace57ce685fb413 553 PRINTS PR01098 Topoisomerase IV subunit B signature 101 118 1.3E-121 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VEA_004517 de0eedfae8a07496bace57ce685fb413 553 PRINTS PR01098 Topoisomerase IV subunit B signature 165 188 1.3E-121 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VEA_004517 de0eedfae8a07496bace57ce685fb413 553 PRINTS PR01098 Topoisomerase IV subunit B signature 238 253 1.3E-121 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VEA_004517 de0eedfae8a07496bace57ce685fb413 553 PRINTS PR01098 Topoisomerase IV subunit B signature 289 314 1.3E-121 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VEA_004517 de0eedfae8a07496bace57ce685fb413 553 PRINTS PR01098 Topoisomerase IV subunit B signature 396 408 1.3E-121 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VEA_004517 de0eedfae8a07496bace57ce685fb413 553 PRINTS PR01098 Topoisomerase IV subunit B signature 62 76 1.3E-121 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VEA_004517 de0eedfae8a07496bace57ce685fb413 553 PRINTS PR01098 Topoisomerase IV subunit B signature 265 288 1.3E-121 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VEA_004517 de0eedfae8a07496bace57ce685fb413 553 SUPERFAMILY SSF54211 144 309 2.47E-47 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEA_002700 5f4ee10003ae48efd2af351c5e8cdebf 207 Gene3D G3DSA:1.10.1740.10 26 109 1.1E-23 T 13-10-2018 VEA_002700 5f4ee10003ae48efd2af351c5e8cdebf 207 Pfam PF04545 Sigma-70, region 4 152 200 1.6E-13 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 VEA_002700 5f4ee10003ae48efd2af351c5e8cdebf 207 Pfam PF04542 Sigma-70 region 2 47 112 6.0E-17 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VEA_002700 5f4ee10003ae48efd2af351c5e8cdebf 207 Gene3D G3DSA:1.10.10.10 117 204 5.1E-16 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_002700 5f4ee10003ae48efd2af351c5e8cdebf 207 SUPERFAMILY SSF88659 140 202 1.53E-14 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VEA_002700 5f4ee10003ae48efd2af351c5e8cdebf 207 SUPERFAMILY SSF88946 21 131 4.71E-26 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VEA_002700 5f4ee10003ae48efd2af351c5e8cdebf 207 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 40 201 2.2E-30 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VEA_003457 72cf52785533547429ac4709df2f2f8a 87 SUPERFAMILY SSF57987 38 87 6.71E-18 T 13-10-2018 VEA_003457 72cf52785533547429ac4709df2f2f8a 87 PIRSF PIRSF004117 9 87 1.0E-9 T 13-10-2018 IPR008020 Capsid protein G8P VEA_003457 72cf52785533547429ac4709df2f2f8a 87 Pfam PF05371 Phage major coat protein, Gp8 42 86 8.8E-7 T 13-10-2018 IPR008020 Capsid protein G8P VEA_003457 72cf52785533547429ac4709df2f2f8a 87 Gene3D G3DSA:1.20.5.80 32 87 2.3E-14 T 13-10-2018 IPR023390 Bacteriophage M13, G8P, capsid domain superfamily VEA_000576 895fbc5a945dec94b9e51fc678e7a3f4 199 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VEA_000576 895fbc5a945dec94b9e51fc678e7a3f4 199 PIRSF PIRSF001488 1 199 3.9E-61 T 13-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL VEA_000576 895fbc5a945dec94b9e51fc678e7a3f4 199 Gene3D G3DSA:3.40.30.10 17 199 2.9E-49 T 13-10-2018 VEA_000576 895fbc5a945dec94b9e51fc678e7a3f4 199 SUPERFAMILY SSF52833 20 197 1.91E-44 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VEA_000576 895fbc5a945dec94b9e51fc678e7a3f4 199 Pfam PF01323 DSBA-like thioredoxin domain 40 179 1.4E-18 T 13-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 VEA_002185 cabad69775d77bc837b9e58d3f89dd0b 530 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 461 6.2E-120 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VEA_002185 cabad69775d77bc837b9e58d3f89dd0b 530 Gene3D G3DSA:3.40.140.20 219 375 4.4E-58 T 13-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VEA_002185 cabad69775d77bc837b9e58d3f89dd0b 530 PIRSF PIRSF000414 1 530 1.2E-228 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VEA_002185 cabad69775d77bc837b9e58d3f89dd0b 530 SUPERFAMILY SSF52335 7 197 1.83E-71 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VEA_002185 cabad69775d77bc837b9e58d3f89dd0b 530 Gene3D G3DSA:3.40.50.1380 4 197 1.6E-87 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VEA_002185 cabad69775d77bc837b9e58d3f89dd0b 530 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 530 45.963 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VEA_002185 cabad69775d77bc837b9e58d3f89dd0b 530 SMART SM00851 19 132 1.3E-61 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain VEA_002185 cabad69775d77bc837b9e58d3f89dd0b 530 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 530 2.2E-261 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VEA_002185 cabad69775d77bc837b9e58d3f89dd0b 530 Pfam PF02142 MGS-like domain 19 132 4.5E-31 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain VEA_002185 cabad69775d77bc837b9e58d3f89dd0b 530 SUPERFAMILY SSF53927 222 530 1.91E-130 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VEA_002185 cabad69775d77bc837b9e58d3f89dd0b 530 SMART SM00798 137 462 1.9E-217 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VEA_002185 cabad69775d77bc837b9e58d3f89dd0b 530 Gene3D G3DSA:3.40.140.20 394 530 2.1E-60 T 13-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VEA_002426 1323d6a6cc5ded2ea906badeb0d6f79d 952 SUPERFAMILY SSF52374 1 641 7.93E-136 T 13-10-2018 VEA_002426 1323d6a6cc5ded2ea906badeb0d6f79d 952 Gene3D G3DSA:1.10.730.10 576 818 3.4E-70 T 13-10-2018 VEA_002426 1323d6a6cc5ded2ea906badeb0d6f79d 952 SUPERFAMILY SSF50677 191 365 8.24E-59 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VEA_002426 1323d6a6cc5ded2ea906badeb0d6f79d 952 SUPERFAMILY SSF47323 642 899 2.99E-65 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEA_002426 1323d6a6cc5ded2ea906badeb0d6f79d 952 Gene3D G3DSA:3.90.740.10 242 310 3.1E-9 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VEA_002426 1323d6a6cc5ded2ea906badeb0d6f79d 952 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 631 1.3E-226 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEA_002426 1323d6a6cc5ded2ea906badeb0d6f79d 952 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 950 16.051 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VEA_002426 1323d6a6cc5ded2ea906badeb0d6f79d 952 Gene3D G3DSA:3.90.740.10 204 241 5.8E-6 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VEA_002426 1323d6a6cc5ded2ea906badeb0d6f79d 952 SUPERFAMILY SSF46589 885 948 8.37E-18 T 13-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 VEA_002426 1323d6a6cc5ded2ea906badeb0d6f79d 952 Pfam PF08264 Anticodon-binding domain of tRNA 674 826 4.2E-39 T 13-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 VEA_002426 1323d6a6cc5ded2ea906badeb0d6f79d 952 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 1.4E-34 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VEA_002426 1323d6a6cc5ded2ea906badeb0d6f79d 952 PRINTS PR00986 Valyl-tRNA synthetase signature 469 490 1.4E-34 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VEA_002426 1323d6a6cc5ded2ea906badeb0d6f79d 952 PRINTS PR00986 Valyl-tRNA synthetase signature 500 518 1.4E-34 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VEA_002426 1323d6a6cc5ded2ea906badeb0d6f79d 952 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 1.4E-34 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VEA_002426 1323d6a6cc5ded2ea906badeb0d6f79d 952 PRINTS PR00986 Valyl-tRNA synthetase signature 369 382 1.4E-34 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VEA_002426 1323d6a6cc5ded2ea906badeb0d6f79d 952 Gene3D G3DSA:3.40.50.620 2 202 2.4E-63 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_002426 1323d6a6cc5ded2ea906badeb0d6f79d 952 Gene3D G3DSA:1.10.287.380 878 949 4.1E-19 T 13-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 VEA_002426 1323d6a6cc5ded2ea906badeb0d6f79d 952 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 885 945 3.1E-18 T 13-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 VEA_002426 1323d6a6cc5ded2ea906badeb0d6f79d 952 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 933 0.0 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VEA_002426 1323d6a6cc5ded2ea906badeb0d6f79d 952 Gene3D G3DSA:3.40.50.620 311 555 1.8E-71 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_002426 1323d6a6cc5ded2ea906badeb0d6f79d 952 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEA_002014 eeda09ffffce2b5ee5257da059f8f76b 107 Gene3D G3DSA:3.30.230.10 1 107 3.3E-38 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VEA_002014 eeda09ffffce2b5ee5257da059f8f76b 107 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 104 13.16 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VEA_002014 eeda09ffffce2b5ee5257da059f8f76b 107 SUPERFAMILY SSF54211 1 103 7.84E-29 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEA_002014 eeda09ffffce2b5ee5257da059f8f76b 107 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 45 59 - T 13-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 VEA_002014 eeda09ffffce2b5ee5257da059f8f76b 107 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 6 103 9.0E-28 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VEA_002014 eeda09ffffce2b5ee5257da059f8f76b 107 Pfam PF00825 Ribonuclease P 1 101 1.1E-31 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VEA_002014 eeda09ffffce2b5ee5257da059f8f76b 107 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 5 93 4.0E-45 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VEA_000002 9cd47cf469f353f870106af6b0da5026 111 Pfam PF13806 Rieske-like [2Fe-2S] domain 7 105 1.2E-32 T 13-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 VEA_000002 9cd47cf469f353f870106af6b0da5026 111 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 5 106 9.3E-33 T 13-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 VEA_000002 9cd47cf469f353f870106af6b0da5026 111 SUPERFAMILY SSF50022 5 106 5.23E-33 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VEA_000002 9cd47cf469f353f870106af6b0da5026 111 Gene3D G3DSA:2.102.10.10 1 111 4.9E-34 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VEA_004114 dd96acf4773d6ba8558a708e0eeaa943 588 SUPERFAMILY SSF46977 452 588 2.75E-45 T 13-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEA_004114 dd96acf4773d6ba8558a708e0eeaa943 588 Pfam PF00890 FAD binding domain 9 405 2.2E-118 T 13-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEA_004114 dd96acf4773d6ba8558a708e0eeaa943 588 PIRSF PIRSF000171 1 580 2.9E-49 T 13-10-2018 VEA_004114 dd96acf4773d6ba8558a708e0eeaa943 588 Gene3D G3DSA:1.20.58.100 431 547 1.1E-37 T 13-10-2018 VEA_004114 dd96acf4773d6ba8558a708e0eeaa943 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 1.2E-35 T 13-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEA_004114 dd96acf4773d6ba8558a708e0eeaa943 588 SUPERFAMILY SSF56425 236 356 2.69E-42 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEA_004114 dd96acf4773d6ba8558a708e0eeaa943 588 Gene3D G3DSA:3.50.50.60 9 416 3.9E-170 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_004114 dd96acf4773d6ba8558a708e0eeaa943 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 6.5E-240 T 13-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEA_004114 dd96acf4773d6ba8558a708e0eeaa943 588 Gene3D G3DSA:3.90.700.10 246 350 3.9E-170 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEA_004114 dd96acf4773d6ba8558a708e0eeaa943 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 2.0E-274 T 13-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEA_004114 dd96acf4773d6ba8558a708e0eeaa943 588 SUPERFAMILY SSF51905 5 443 1.15E-72 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_004114 dd96acf4773d6ba8558a708e0eeaa943 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 13-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEA_004114 dd96acf4773d6ba8558a708e0eeaa943 588 Gene3D G3DSA:4.10.80.40 548 588 5.5E-24 T 13-10-2018 VEA_000984 32d7d04e894e2175a9a001c7ca523283 631 SUPERFAMILY SSF47384 229 309 1.04E-21 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEA_000984 32d7d04e894e2175a9a001c7ca523283 631 Pfam PF00512 His Kinase A (phospho-acceptor) domain 244 308 1.2E-19 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_000984 32d7d04e894e2175a9a001c7ca523283 631 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 424 2.3E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_000984 32d7d04e894e2175a9a001c7ca523283 631 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 449 2.3E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_000984 32d7d04e894e2175a9a001c7ca523283 631 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 410 2.3E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_000984 32d7d04e894e2175a9a001c7ca523283 631 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 468 2.3E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_000984 32d7d04e894e2175a9a001c7ca523283 631 Pfam PF00072 Response regulator receiver domain 504 615 1.6E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_000984 32d7d04e894e2175a9a001c7ca523283 631 SMART SM00448 502 616 4.9E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_000984 32d7d04e894e2175a9a001c7ca523283 631 Pfam PF17149 Periplasmic sensor domain found in signal transduction proteins 41 145 1.4E-15 T 13-10-2018 IPR033414 Periplasmic sensor domain VEA_000984 32d7d04e894e2175a9a001c7ca523283 631 Gene3D G3DSA:1.10.287.130 209 306 2.8E-30 T 13-10-2018 VEA_000984 32d7d04e894e2175a9a001c7ca523283 631 SUPERFAMILY SSF52172 502 621 6.26E-36 T 13-10-2018 IPR011006 CheY-like superfamily VEA_000984 32d7d04e894e2175a9a001c7ca523283 631 Gene3D G3DSA:3.30.565.10 307 476 1.7E-52 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_000984 32d7d04e894e2175a9a001c7ca523283 631 SMART SM00388 243 308 7.0E-25 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_000984 32d7d04e894e2175a9a001c7ca523283 631 SUPERFAMILY SSF55874 297 470 7.6E-47 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_000984 32d7d04e894e2175a9a001c7ca523283 631 SMART SM00387 355 471 9.4E-38 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_000984 32d7d04e894e2175a9a001c7ca523283 631 Gene3D G3DSA:3.40.50.2300 487 621 2.9E-40 T 13-10-2018 VEA_000984 32d7d04e894e2175a9a001c7ca523283 631 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 468 1.1E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_003049 f7ad2771ab2c941ec1ae266bfd6446ee 427 Pfam PF02687 FtsX-like permease family 322 420 2.1E-10 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VEA_003049 f7ad2771ab2c941ec1ae266bfd6446ee 427 Pfam PF12704 MacB-like periplasmic core domain 20 255 4.8E-27 T 13-10-2018 IPR025857 MacB-like periplasmic core domain VEA_002962 70fb0b6c5ec2f8ec7a6adafdadd959f1 323 SMART SM00382 32 238 2.8E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_002962 70fb0b6c5ec2f8ec7a6adafdadd959f1 323 Gene3D G3DSA:3.40.50.300 1 322 1.6E-97 T 13-10-2018 VEA_002962 70fb0b6c5ec2f8ec7a6adafdadd959f1 323 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 315 9.6E-24 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VEA_002962 70fb0b6c5ec2f8ec7a6adafdadd959f1 323 Pfam PF00005 ABC transporter 24 180 2.0E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_002962 70fb0b6c5ec2f8ec7a6adafdadd959f1 323 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_002962 70fb0b6c5ec2f8ec7a6adafdadd959f1 323 SUPERFAMILY SSF52540 31 301 2.44E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002962 70fb0b6c5ec2f8ec7a6adafdadd959f1 323 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 296 5.6E-18 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VEA_002370 e42fcc51bd7fb262525c5723fe8c04bf 364 Gene3D G3DSA:1.25.40.10 150 362 2.0E-16 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_002370 e42fcc51bd7fb262525c5723fe8c04bf 364 SMART SM00028 276 309 84.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_002370 e42fcc51bd7fb262525c5723fe8c04bf 364 SMART SM00028 176 209 140.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_002370 e42fcc51bd7fb262525c5723fe8c04bf 364 SMART SM00028 210 243 14.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_002370 e42fcc51bd7fb262525c5723fe8c04bf 364 SUPERFAMILY SSF48452 181 337 1.44E-13 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_002263 5e7b835780674c417b4ae3971bff3b3a 61 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 59 8.7E-23 T 13-10-2018 IPR019201 Protein of unknown function DUF2065 VEA_004365 34e3716d1e0853fab7581b54d8cd9784 607 Gene3D G3DSA:3.30.1360.200 270 423 6.3E-51 T 13-10-2018 VEA_004365 34e3716d1e0853fab7581b54d8cd9784 607 Pfam PF13721 SecD export protein N-terminal TM region 1 92 2.2E-28 T 13-10-2018 IPR027398 SecD export protein N-terminal TM domain VEA_004365 34e3716d1e0853fab7581b54d8cd9784 607 Pfam PF02355 Protein export membrane protein 425 586 1.4E-17 T 13-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VEA_004365 34e3716d1e0853fab7581b54d8cd9784 607 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 112 593 3.8E-151 T 13-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 VEA_004365 34e3716d1e0853fab7581b54d8cd9784 607 Gene3D G3DSA:3.30.70.3400 211 429 6.3E-51 T 13-10-2018 VEA_004365 34e3716d1e0853fab7581b54d8cd9784 607 Pfam PF07549 SecD/SecF GG Motif 105 130 2.5E-7 T 13-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VEA_004365 34e3716d1e0853fab7581b54d8cd9784 607 SUPERFAMILY SSF82866 402 598 3.79E-44 T 13-10-2018 VEA_004365 34e3716d1e0853fab7581b54d8cd9784 607 Gene3D G3DSA:1.20.1640.10 440 590 2.2E-7 T 13-10-2018 VEA_004365 34e3716d1e0853fab7581b54d8cd9784 607 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 607 46.819 T 13-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 VEA_004365 34e3716d1e0853fab7581b54d8cd9784 607 PRINTS PR00702 Acriflavin resistance protein family signature 441 464 3.5E-5 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_004365 34e3716d1e0853fab7581b54d8cd9784 607 PRINTS PR00702 Acriflavin resistance protein family signature 495 519 3.5E-5 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_004365 34e3716d1e0853fab7581b54d8cd9784 607 PRINTS PR00702 Acriflavin resistance protein family signature 570 593 3.5E-5 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_004365 34e3716d1e0853fab7581b54d8cd9784 607 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 337 586 2.9E-82 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VEA_000082 efc065e92fd6a474d33e96369bec39c5 386 SUPERFAMILY SSF103473 18 379 1.14E-32 T 13-10-2018 IPR036259 MFS transporter superfamily VEA_000082 efc065e92fd6a474d33e96369bec39c5 386 Gene3D G3DSA:1.20.1250.20 202 383 2.4E-9 T 13-10-2018 VEA_000082 efc065e92fd6a474d33e96369bec39c5 386 Gene3D G3DSA:1.20.1250.20 13 194 2.1E-16 T 13-10-2018 VEA_000082 efc065e92fd6a474d33e96369bec39c5 386 Pfam PF07690 Major Facilitator Superfamily 19 343 5.8E-24 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEA_001468 86748c185cd3543eaf6290838b1b07ad 666 Pfam PF12729 Four helix bundle sensory module for signal transduction 2 162 3.7E-14 T 13-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VEA_001468 86748c185cd3543eaf6290838b1b07ad 666 Pfam PF00672 HAMP domain 337 379 7.7E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_001468 86748c185cd3543eaf6290838b1b07ad 666 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 477 622 3.6E-42 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_001468 86748c185cd3543eaf6290838b1b07ad 666 SMART SM00304 335 388 1.6E-6 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_001468 86748c185cd3543eaf6290838b1b07ad 666 SMART SM00283 403 664 2.3E-61 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_001468 86748c185cd3543eaf6290838b1b07ad 666 SUPERFAMILY SSF58104 361 665 7.85E-66 T 13-10-2018 VEA_001468 86748c185cd3543eaf6290838b1b07ad 666 Gene3D G3DSA:1.10.287.950 335 666 2.3E-65 T 13-10-2018 VEA_001960 d306c1ae7bc08356e6c37538a2d435a7 598 SUPERFAMILY SSF143975 3 417 3.79E-131 T 13-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VEA_001960 d306c1ae7bc08356e6c37538a2d435a7 598 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 504 515 - T 13-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VEA_001960 d306c1ae7bc08356e6c37538a2d435a7 598 Hamap MF_02094 Phosphogluconate dehydratase [edd]. 2 598 53.427 T 13-10-2018 VEA_001960 d306c1ae7bc08356e6c37538a2d435a7 598 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 3 596 2.4E-250 T 13-10-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 VEA_001960 d306c1ae7bc08356e6c37538a2d435a7 598 Pfam PF00920 Dehydratase family 68 594 2.4E-148 T 13-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VEA_001960 d306c1ae7bc08356e6c37538a2d435a7 598 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 155 165 - T 13-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VEA_001960 d306c1ae7bc08356e6c37538a2d435a7 598 Gene3D G3DSA:3.50.30.80 418 562 7.2E-48 T 13-10-2018 VEA_001960 d306c1ae7bc08356e6c37538a2d435a7 598 SUPERFAMILY SSF52016 418 596 5.41E-52 T 13-10-2018 VEA_001823 e90fe51b88e0afec76acf457f8c9c7f8 399 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 395 4.6E-152 T 13-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 VEA_001823 e90fe51b88e0afec76acf457f8c9c7f8 399 Gene3D G3DSA:3.40.50.10300 186 399 6.6E-84 T 13-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 VEA_001823 e90fe51b88e0afec76acf457f8c9c7f8 399 Pfam PF02441 Flavoprotein 7 179 1.6E-42 T 13-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 VEA_001823 e90fe51b88e0afec76acf457f8c9c7f8 399 SUPERFAMILY SSF102645 184 397 6.28E-80 T 13-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 VEA_001823 e90fe51b88e0afec76acf457f8c9c7f8 399 SUPERFAMILY SSF52507 1 182 1.96E-60 T 13-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 VEA_001823 e90fe51b88e0afec76acf457f8c9c7f8 399 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 186 370 7.4E-77 T 13-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 VEA_001823 e90fe51b88e0afec76acf457f8c9c7f8 399 Gene3D G3DSA:3.40.50.1950 1 185 4.3E-55 T 13-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 VEA_004390 fe1c8257e813594e879007ab6c33236a 278 Gene3D G3DSA:3.30.1380.10 19 278 8.2E-96 T 13-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VEA_004390 fe1c8257e813594e879007ab6c33236a 278 Pfam PF03411 Penicillin-insensitive murein endopeptidase 35 275 6.9E-92 T 13-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 VEA_004390 fe1c8257e813594e879007ab6c33236a 278 PIRSF PIRSF018455 3 278 5.5E-112 T 13-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 VEA_004390 fe1c8257e813594e879007ab6c33236a 278 SUPERFAMILY SSF55166 20 277 9.02E-94 T 13-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VEA_002901 06503418f3f39e10e3e115ee4db20700 102 Gene3D G3DSA:1.10.3990.20 11 102 7.5E-33 T 13-10-2018 IPR038268 Ribbon-helix-helix domain superfamily VEA_002901 06503418f3f39e10e3e115ee4db20700 102 Pfam PF13467 Ribbon-helix-helix domain 19 85 9.7E-25 T 13-10-2018 IPR027373 Ribbon-helix-helix domain VEA_000769 16287702a312050de5e98b5e8ff2ab1b 284 Hamap MF_01375 Phosphonoacetaldehyde hydrolase [phnX]. 1 284 140.542 T 13-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 VEA_000769 16287702a312050de5e98b5e8ff2ab1b 284 Pfam PF13419 Haloacid dehalogenase-like hydrolase 22 218 7.4E-9 T 13-10-2018 VEA_000769 16287702a312050de5e98b5e8ff2ab1b 284 Gene3D G3DSA:1.10.150.240 37 115 1.5E-97 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VEA_000769 16287702a312050de5e98b5e8ff2ab1b 284 Gene3D G3DSA:3.40.50.1000 21 284 1.5E-97 T 13-10-2018 IPR023214 HAD superfamily VEA_000769 16287702a312050de5e98b5e8ff2ab1b 284 TIGRFAM TIGR01422 phosphonatase: phosphonoacetaldehyde hydrolase 19 271 4.1E-118 T 13-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 VEA_000769 16287702a312050de5e98b5e8ff2ab1b 284 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 86 218 6.3E-13 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEA_000769 16287702a312050de5e98b5e8ff2ab1b 284 SUPERFAMILY SSF56784 19 271 5.93E-54 T 13-10-2018 IPR036412 HAD-like superfamily VEA_004076 045b9e11a1508d112bf496a5616f7bfe 154 PIRSF PIRSF020565 1 154 1.1E-65 T 13-10-2018 IPR016776 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted VEA_004076 045b9e11a1508d112bf496a5616f7bfe 154 SUPERFAMILY SSF54637 4 143 2.39E-28 T 13-10-2018 IPR029069 HotDog domain superfamily VEA_004076 045b9e11a1508d112bf496a5616f7bfe 154 Gene3D G3DSA:3.10.129.10 4 141 9.0E-23 T 13-10-2018 VEA_002919 abf80e507f133ec4c635551ffd88b034 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 2.0E-16 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_002919 abf80e507f133ec4c635551ffd88b034 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 2.0E-16 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_002919 abf80e507f133ec4c635551ffd88b034 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 2.0E-16 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_002919 abf80e507f133ec4c635551ffd88b034 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.0E-16 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_002919 abf80e507f133ec4c635551ffd88b034 229 Gene3D G3DSA:3.40.50.720 1 229 1.7E-62 T 13-10-2018 VEA_002919 abf80e507f133ec4c635551ffd88b034 229 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 4.2E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_002919 abf80e507f133ec4c635551ffd88b034 229 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 4.2E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_002919 abf80e507f133ec4c635551ffd88b034 229 SUPERFAMILY SSF51735 3 229 4.69E-77 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_002919 abf80e507f133ec4c635551ffd88b034 229 Pfam PF00106 short chain dehydrogenase 3 190 2.4E-32 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_002940 6baef690c02504479446a74a862d04fb 293 SUPERFAMILY SSF103088 158 287 2.09E-26 T 13-10-2018 IPR036737 OmpA-like domain superfamily VEA_002940 6baef690c02504479446a74a862d04fb 293 ProSitePatterns PS01068 OmpA-like domain. 220 264 - T 13-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 VEA_002940 6baef690c02504479446a74a862d04fb 293 Gene3D G3DSA:3.30.1330.60 176 293 4.0E-40 T 13-10-2018 IPR036737 OmpA-like domain superfamily VEA_002940 6baef690c02504479446a74a862d04fb 293 Pfam PF00691 OmpA family 187 282 2.4E-20 T 13-10-2018 IPR006665 OmpA-like domain VEA_002940 6baef690c02504479446a74a862d04fb 293 Gene3D G3DSA:2.60.40.2540 22 175 1.8E-58 T 13-10-2018 VEA_002940 6baef690c02504479446a74a862d04fb 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 45 63 5.1E-175 T 13-10-2018 VEA_002940 6baef690c02504479446a74a862d04fb 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 66 84 5.1E-175 T 13-10-2018 VEA_002940 6baef690c02504479446a74a862d04fb 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 204 230 5.1E-175 T 13-10-2018 VEA_002940 6baef690c02504479446a74a862d04fb 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 233 250 5.1E-175 T 13-10-2018 VEA_002940 6baef690c02504479446a74a862d04fb 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 28 44 5.1E-175 T 13-10-2018 VEA_002940 6baef690c02504479446a74a862d04fb 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 123 145 5.1E-175 T 13-10-2018 VEA_002940 6baef690c02504479446a74a862d04fb 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 271 291 5.1E-175 T 13-10-2018 VEA_002940 6baef690c02504479446a74a862d04fb 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 104 121 5.1E-175 T 13-10-2018 VEA_002940 6baef690c02504479446a74a862d04fb 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 3 27 5.1E-175 T 13-10-2018 VEA_002940 6baef690c02504479446a74a862d04fb 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 251 270 5.1E-175 T 13-10-2018 VEA_002940 6baef690c02504479446a74a862d04fb 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 148 167 5.1E-175 T 13-10-2018 VEA_002940 6baef690c02504479446a74a862d04fb 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 174 201 5.1E-175 T 13-10-2018 VEA_002940 6baef690c02504479446a74a862d04fb 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 85 103 5.1E-175 T 13-10-2018 VEA_000037 fb5a97b76ef9bd6354e8aaee2e6c1a2f 365 SUPERFAMILY SSF51905 3 365 3.84E-49 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_000037 fb5a97b76ef9bd6354e8aaee2e6c1a2f 365 Gene3D G3DSA:3.50.50.60 6 347 5.5E-75 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_000037 fb5a97b76ef9bd6354e8aaee2e6c1a2f 365 Gene3D G3DSA:3.30.9.10 90 309 5.5E-75 T 13-10-2018 VEA_000037 fb5a97b76ef9bd6354e8aaee2e6c1a2f 365 SUPERFAMILY SSF54373 228 307 3.14E-9 T 13-10-2018 VEA_000037 fb5a97b76ef9bd6354e8aaee2e6c1a2f 365 Pfam PF01266 FAD dependent oxidoreductase 5 339 1.1E-49 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VEA_000410 a717b18a35120c8974738efa1e117099 505 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 393 489 9.3E-14 T 13-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VEA_000410 a717b18a35120c8974738efa1e117099 505 SUPERFAMILY SSF55604 429 503 3.92E-18 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VEA_000410 a717b18a35120c8974738efa1e117099 505 Pfam PF02378 Phosphotransferase system, EIIC 1 330 4.6E-62 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VEA_000410 a717b18a35120c8974738efa1e117099 505 Gene3D G3DSA:3.30.1360.60 425 505 4.4E-23 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VEA_000410 a717b18a35120c8974738efa1e117099 505 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 442 459 - T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VEA_000410 a717b18a35120c8974738efa1e117099 505 TIGRFAM TIGR02005 PTS-IIBC-alpha: PTS system, alpha-glucoside-specific IIBC component 1 503 1.1E-203 T 13-10-2018 IPR010975 Phosphotransferase system, alpha-glucoside-specific IIBC component GO:0008982|GO:0009401 VEA_000410 a717b18a35120c8974738efa1e117099 505 Pfam PF00367 phosphotransferase system, EIIB 433 463 2.1E-13 T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VEA_002762 aea122af05ff4a1e5d232d6c71e04d46 1159 Gene3D G3DSA:3.20.20.140 1 270 2.4E-89 T 13-10-2018 VEA_002762 aea122af05ff4a1e5d232d6c71e04d46 1159 SMART SM00481 7 74 6.6E-25 T 13-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal VEA_002762 aea122af05ff4a1e5d232d6c71e04d46 1159 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 292 735 9.4E-175 T 13-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_002762 aea122af05ff4a1e5d232d6c71e04d46 1159 SUPERFAMILY SSF50249 976 1064 2.18E-5 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_002762 aea122af05ff4a1e5d232d6c71e04d46 1159 Gene3D G3DSA:1.10.10.1600 433 510 2.3E-32 T 13-10-2018 VEA_002762 aea122af05ff4a1e5d232d6c71e04d46 1159 SUPERFAMILY SSF89550 5 263 6.47E-12 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 VEA_002762 aea122af05ff4a1e5d232d6c71e04d46 1159 Pfam PF01336 OB-fold nucleic acid binding domain 993 1071 9.0E-11 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VEA_002762 aea122af05ff4a1e5d232d6c71e04d46 1159 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1030 0.0 T 13-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_002762 aea122af05ff4a1e5d232d6c71e04d46 1159 Gene3D G3DSA:2.40.50.140 983 1072 4.0E-9 T 13-10-2018 VEA_002762 aea122af05ff4a1e5d232d6c71e04d46 1159 Pfam PF14579 Helix-hairpin-helix motif 809 897 5.0E-26 T 13-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_002762 aea122af05ff4a1e5d232d6c71e04d46 1159 Pfam PF02811 PHP domain 8 171 4.8E-41 T 13-10-2018 IPR004013 PHP domain GO:0003824 VEA_003962 54824610ded997abd30ad88fc838b95b 343 SUPERFAMILY SSF56935 20 343 1.16E-40 T 13-10-2018 VEA_003962 54824610ded997abd30ad88fc838b95b 343 Pfam PF13609 Gram-negative porin 7 314 4.2E-21 T 13-10-2018 VEA_003962 54824610ded997abd30ad88fc838b95b 343 Gene3D G3DSA:2.40.160.10 20 343 3.5E-36 T 13-10-2018 IPR023614 Porin domain superfamily VEA_003558 811ff598af8eeb5c5fc8bc8a8aeb871c 651 PRINTS PR00301 70kDa heat shock protein signature 241 251 5.1E-7 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEA_003558 811ff598af8eeb5c5fc8bc8a8aeb871c 651 PRINTS PR00301 70kDa heat shock protein signature 174 194 5.1E-7 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEA_003558 811ff598af8eeb5c5fc8bc8a8aeb871c 651 PRINTS PR00301 70kDa heat shock protein signature 23 36 5.1E-7 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEA_003558 811ff598af8eeb5c5fc8bc8a8aeb871c 651 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 235 248 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VEA_003558 811ff598af8eeb5c5fc8bc8a8aeb871c 651 Pfam PF00012 Hsp70 protein 25 349 1.7E-15 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEA_003558 811ff598af8eeb5c5fc8bc8a8aeb871c 651 Gene3D G3DSA:3.90.640.10 271 350 3.9E-35 T 13-10-2018 VEA_003558 811ff598af8eeb5c5fc8bc8a8aeb871c 651 SUPERFAMILY SSF53067 23 216 1.73E-26 T 13-10-2018 VEA_003558 811ff598af8eeb5c5fc8bc8a8aeb871c 651 Gene3D G3DSA:3.30.420.40 25 222 3.9E-35 T 13-10-2018 VEA_003558 811ff598af8eeb5c5fc8bc8a8aeb871c 651 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 27 34 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VEA_003558 811ff598af8eeb5c5fc8bc8a8aeb871c 651 Gene3D G3DSA:3.30.420.40 228 270 3.9E-35 T 13-10-2018 VEA_003558 811ff598af8eeb5c5fc8bc8a8aeb871c 651 SUPERFAMILY SSF53067 230 492 4.82E-26 T 13-10-2018 VEA_003135 17e9dba3f63ebfeaba500aa92acd249a 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 446 2.0E-6 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_003135 17e9dba3f63ebfeaba500aa92acd249a 451 Pfam PF17200 Single Cache domain 2 45 192 1.9E-38 T 13-10-2018 IPR033480 Single Cache domain 2 VEA_003135 17e9dba3f63ebfeaba500aa92acd249a 451 Gene3D G3DSA:3.30.450.20 27 203 1.3E-45 T 13-10-2018 VEA_003135 17e9dba3f63ebfeaba500aa92acd249a 451 SMART SM01049 42 133 6.3E-26 T 13-10-2018 IPR033480 Single Cache domain 2 VEA_003135 17e9dba3f63ebfeaba500aa92acd249a 451 Pfam PF07730 Histidine kinase 250 315 3.7E-14 T 13-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 VEA_003135 17e9dba3f63ebfeaba500aa92acd249a 451 PIRSF PIRSF037314 1 451 1.5E-187 T 13-10-2018 IPR017171 Signal transduction histidine kinase, MctS VEA_003135 17e9dba3f63ebfeaba500aa92acd249a 451 Gene3D G3DSA:3.30.565.10 313 448 1.9E-29 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_003135 17e9dba3f63ebfeaba500aa92acd249a 451 SUPERFAMILY SSF55874 320 443 4.71E-19 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_003135 17e9dba3f63ebfeaba500aa92acd249a 451 SMART SM00387 353 447 2.8E-6 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_002780 b18097d6bebfa19bbe1baaeab0434130 220 Gene3D G3DSA:3.40.50.170 7 218 5.4E-84 T 13-10-2018 VEA_002780 b18097d6bebfa19bbe1baaeab0434130 220 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 7 197 1.8E-77 T 13-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 VEA_002780 b18097d6bebfa19bbe1baaeab0434130 220 SUPERFAMILY SSF53328 7 204 2.75E-67 T 13-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VEA_002780 b18097d6bebfa19bbe1baaeab0434130 220 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 8 193 31.399 T 13-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 VEA_002780 b18097d6bebfa19bbe1baaeab0434130 220 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 139 162 - T 13-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VEA_002780 b18097d6bebfa19bbe1baaeab0434130 220 Pfam PF00551 Formyl transferase 7 186 3.4E-63 T 13-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VEA_001089 1684bdcfa4274897be82383d77e69449 1329 SUPERFAMILY SSF81296 171 296 1.12E-29 T 13-10-2018 IPR014756 Immunoglobulin E-set VEA_001089 1684bdcfa4274897be82383d77e69449 1329 Pfam PF03714 Bacterial pullanase-associated domain 51 171 2.1E-17 T 13-10-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 VEA_001089 1684bdcfa4274897be82383d77e69449 1329 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 311 395 1.5E-12 T 13-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 VEA_001089 1684bdcfa4274897be82383d77e69449 1329 TIGRFAM TIGR02103 pullul_strch: alpha-1,6-glucosidases, pullulanase-type 180 1080 0.0 T 13-10-2018 IPR011839 Alpha-1,6-glucosidases, pullulanase-type GO:0005975|GO:0051060 VEA_001089 1684bdcfa4274897be82383d77e69449 1329 Gene3D G3DSA:2.60.40.1180 1010 1091 6.8E-29 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta VEA_001089 1684bdcfa4274897be82383d77e69449 1329 Gene3D G3DSA:2.60.40.10 303 409 4.1E-30 T 13-10-2018 IPR013783 Immunoglobulin-like fold VEA_001089 1684bdcfa4274897be82383d77e69449 1329 SUPERFAMILY SSF81296 1103 1153 1.4E-5 T 13-10-2018 IPR014756 Immunoglobulin E-set VEA_001089 1684bdcfa4274897be82383d77e69449 1329 SMART SM00642 552 915 0.001 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VEA_001089 1684bdcfa4274897be82383d77e69449 1329 SUPERFAMILY SSF51445 407 975 2.28E-125 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VEA_001089 1684bdcfa4274897be82383d77e69449 1329 SUPERFAMILY SSF49452 18 171 7.2E-29 T 13-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 VEA_001089 1684bdcfa4274897be82383d77e69449 1329 Gene3D G3DSA:2.60.40.1130 180 296 2.0E-30 T 13-10-2018 VEA_001089 1684bdcfa4274897be82383d77e69449 1329 Gene3D G3DSA:3.20.20.80 410 1009 2.1E-216 T 13-10-2018 VEA_001089 1684bdcfa4274897be82383d77e69449 1329 Gene3D G3DSA:2.60.40.10 1092 1161 1.8E-6 T 13-10-2018 IPR013783 Immunoglobulin-like fold VEA_001089 1684bdcfa4274897be82383d77e69449 1329 Pfam PF11852 Domain of unknown function (DUF3372) 917 1079 5.2E-62 T 13-10-2018 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal VEA_001089 1684bdcfa4274897be82383d77e69449 1329 SUPERFAMILY SSF81296 309 412 2.8E-20 T 13-10-2018 IPR014756 Immunoglobulin E-set VEA_001089 1684bdcfa4274897be82383d77e69449 1329 Gene3D G3DSA:2.60.40.1110 34 170 1.3E-29 T 13-10-2018 VEA_001089 1684bdcfa4274897be82383d77e69449 1329 SUPERFAMILY SSF51011 978 1092 1.51E-39 T 13-10-2018 VEA_000157 fb409628cd2e089af2ace9f7dcab792b 295 SUPERFAMILY SSF53850 97 289 2.35E-19 T 13-10-2018 VEA_000157 fb409628cd2e089af2ace9f7dcab792b 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 3.1E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000157 fb409628cd2e089af2ace9f7dcab792b 295 Gene3D G3DSA:1.10.10.10 5 90 7.2E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000157 fb409628cd2e089af2ace9f7dcab792b 295 Pfam PF03466 LysR substrate binding domain 122 291 1.4E-14 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_000157 fb409628cd2e089af2ace9f7dcab792b 295 SUPERFAMILY SSF46785 6 86 1.22E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000157 fb409628cd2e089af2ace9f7dcab792b 295 Gene3D G3DSA:3.40.190.290 96 281 1.0E-10 T 13-10-2018 VEA_001358 96caabf225f227d83a927673a1b4397c 176 TIGRFAM TIGR04110 heme_HutZ: heme utilization protein HutZ 4 171 8.5E-91 T 13-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain VEA_001358 96caabf225f227d83a927673a1b4397c 176 Gene3D G3DSA:2.30.110.10 12 176 3.9E-56 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VEA_001358 96caabf225f227d83a927673a1b4397c 176 SUPERFAMILY SSF50475 12 162 2.14E-35 T 13-10-2018 VEA_001358 96caabf225f227d83a927673a1b4397c 176 PIRSF PIRSF004633 1 176 3.7E-78 T 13-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain VEA_001358 96caabf225f227d83a927673a1b4397c 176 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 15 105 7.6E-18 T 13-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VEA_001865 147165721acecce949d1a41b84ebac4f 227 Pfam PF12105 SpoU, rRNA methylase, C-terminal 162 217 8.2E-25 T 13-10-2018 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 VEA_001865 147165721acecce949d1a41b84ebac4f 227 SUPERFAMILY SSF75217 4 173 2.09E-45 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases VEA_001865 147165721acecce949d1a41b84ebac4f 227 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 2 196 34.878 T 13-10-2018 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 VEA_001865 147165721acecce949d1a41b84ebac4f 227 Gene3D G3DSA:3.40.1280.10 1 204 6.5E-59 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VEA_001865 147165721acecce949d1a41b84ebac4f 227 Pfam PF00588 SpoU rRNA Methylase family 20 158 2.2E-34 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VEA_003715 9f673cdb2a240f265ba95f164320f565 129 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 34 5.0E-14 T 13-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 VEA_003715 9f673cdb2a240f265ba95f164320f565 129 SUPERFAMILY SSF54364 1 36 1.7E-13 T 13-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 VEA_003715 9f673cdb2a240f265ba95f164320f565 129 Gene3D G3DSA:3.10.20.80 1 33 1.8E-14 T 13-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 VEA_003715 9f673cdb2a240f265ba95f164320f565 129 SUPERFAMILY SSF55200 41 129 2.22E-35 T 13-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 VEA_003715 9f673cdb2a240f265ba95f164320f565 129 ProSitePatterns PS00938 Initiation factor 3 signature. 16 29 - T 13-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 VEA_003715 9f673cdb2a240f265ba95f164320f565 129 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 129 6.2E-59 T 13-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 VEA_003715 9f673cdb2a240f265ba95f164320f565 129 Gene3D G3DSA:3.30.110.10 34 129 9.2E-40 T 13-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 VEA_003715 9f673cdb2a240f265ba95f164320f565 129 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 41 127 7.1E-38 T 13-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 VEA_001870 17ec82414e699a948574c418e18486a5 239 SMART SM00862 156 232 1.3E-21 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEA_001870 17ec82414e699a948574c418e18486a5 239 Gene3D G3DSA:3.40.50.2300 1 125 4.1E-40 T 13-10-2018 VEA_001870 17ec82414e699a948574c418e18486a5 239 SUPERFAMILY SSF52172 3 126 5.41E-42 T 13-10-2018 IPR011006 CheY-like superfamily VEA_001870 17ec82414e699a948574c418e18486a5 239 SUPERFAMILY SSF46894 132 234 1.25E-26 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEA_001870 17ec82414e699a948574c418e18486a5 239 SMART SM00448 5 116 3.8E-45 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_001870 17ec82414e699a948574c418e18486a5 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 1.3E-22 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEA_001870 17ec82414e699a948574c418e18486a5 239 Pfam PF00072 Response regulator receiver domain 7 117 2.1E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_001870 17ec82414e699a948574c418e18486a5 239 Gene3D G3DSA:1.10.10.10 130 239 1.3E-38 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001104 f9afbfcc1e6fb9e35b16ada9c40c678c 726 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 127 717 2.0E-191 T 13-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 VEA_001104 f9afbfcc1e6fb9e35b16ada9c40c678c 726 SUPERFAMILY SSF51445 164 717 3.26E-148 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VEA_001104 f9afbfcc1e6fb9e35b16ada9c40c678c 726 Pfam PF02446 4-alpha-glucanotransferase 177 699 1.1E-126 T 13-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 VEA_002255 c6fc136b0f80e7c660b222a9dc898643 154 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 139 8.7E-53 T 13-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 VEA_002255 c6fc136b0f80e7c660b222a9dc898643 154 SUPERFAMILY SSF52540 27 151 7.14E-24 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002255 c6fc136b0f80e7c660b222a9dc898643 154 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 133 6.0E-43 T 13-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 VEA_002255 c6fc136b0f80e7c660b222a9dc898643 154 Gene3D G3DSA:3.40.50.300 2 153 4.5E-49 T 13-10-2018 VEA_004352 ef49705eb175407cf9353cfde48b1316 141 SUPERFAMILY SSF54919 1 140 1.57E-61 T 13-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VEA_004352 ef49705eb175407cf9353cfde48b1316 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 36.113 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VEA_004352 ef49705eb175407cf9353cfde48b1316 141 Pfam PF00334 Nucleoside diphosphate kinase 4 138 1.2E-58 T 13-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VEA_004352 ef49705eb175407cf9353cfde48b1316 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 13-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VEA_004352 ef49705eb175407cf9353cfde48b1316 141 SMART SM00562 3 140 1.4E-90 T 13-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VEA_004352 ef49705eb175407cf9353cfde48b1316 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 3.8E-38 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VEA_004352 ef49705eb175407cf9353cfde48b1316 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 3.8E-38 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VEA_004352 ef49705eb175407cf9353cfde48b1316 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 3.8E-38 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VEA_004352 ef49705eb175407cf9353cfde48b1316 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 3.8E-38 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VEA_004352 ef49705eb175407cf9353cfde48b1316 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 3.8E-38 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VEA_004352 ef49705eb175407cf9353cfde48b1316 141 Gene3D G3DSA:3.30.70.141 1 141 3.5E-60 T 13-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VEA_003765 109ab5113796e3d4e2b1da33667a9366 760 Gene3D G3DSA:2.40.110.10 177 300 3.6E-90 T 13-10-2018 VEA_003765 109ab5113796e3d4e2b1da33667a9366 760 SUPERFAMILY SSF56645 61 296 3.01E-46 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 VEA_003765 109ab5113796e3d4e2b1da33667a9366 760 Gene3D G3DSA:1.10.540.10 63 176 3.6E-90 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 VEA_003765 109ab5113796e3d4e2b1da33667a9366 760 SUPERFAMILY SSF47203 301 453 1.26E-20 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 VEA_003765 109ab5113796e3d4e2b1da33667a9366 760 Gene3D G3DSA:1.20.140.10 301 446 3.6E-90 T 13-10-2018 VEA_003765 109ab5113796e3d4e2b1da33667a9366 760 Pfam PF09317 Domain of unknown function (DUF1974) 455 739 2.1E-112 T 13-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 VEA_003765 109ab5113796e3d4e2b1da33667a9366 760 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 301 447 4.8E-8 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VEA_003765 109ab5113796e3d4e2b1da33667a9366 760 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 66 173 7.2E-15 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 VEA_003765 109ab5113796e3d4e2b1da33667a9366 760 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 178 277 1.9E-9 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 VEA_002435 3058d9ef0b69f8637ad5bef42952a169 86 Gene3D G3DSA:3.40.50.2300 1 86 1.3E-28 T 13-10-2018 VEA_002435 3058d9ef0b69f8637ad5bef42952a169 86 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 1 80 1.2E-15 T 13-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VEA_002435 3058d9ef0b69f8637ad5bef42952a169 86 SUPERFAMILY SSF52794 1 86 1.57E-26 T 13-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VEA_003020 d37c38ae06c671185c765f4a09d3030e 556 Gene3D G3DSA:2.40.50.140 445 528 1.5E-18 T 13-10-2018 VEA_003020 d37c38ae06c671185c765f4a09d3030e 556 Gene3D G3DSA:2.40.50.140 99 178 1.5E-5 T 13-10-2018 VEA_003020 d37c38ae06c671185c765f4a09d3030e 556 SUPERFAMILY SSF50249 342 440 2.09E-22 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_003020 d37c38ae06c671185c765f4a09d3030e 556 SUPERFAMILY SSF50249 189 277 4.18E-27 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_003020 d37c38ae06c671185c765f4a09d3030e 556 Gene3D G3DSA:2.40.50.140 6 98 1.0E-16 T 13-10-2018 VEA_003020 d37c38ae06c671185c765f4a09d3030e 556 SUPERFAMILY SSF50249 255 360 2.29E-28 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_003020 d37c38ae06c671185c765f4a09d3030e 556 SUPERFAMILY SSF50249 4 112 1.89E-17 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_003020 d37c38ae06c671185c765f4a09d3030e 556 SUPERFAMILY SSF50249 88 174 2.61E-13 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_003020 d37c38ae06c671185c765f4a09d3030e 556 PRINTS PR00681 Ribosomal protein S1 signature 155 175 3.4E-97 T 13-10-2018 VEA_003020 d37c38ae06c671185c765f4a09d3030e 556 PRINTS PR00681 Ribosomal protein S1 signature 108 124 3.4E-97 T 13-10-2018 VEA_003020 d37c38ae06c671185c765f4a09d3030e 556 PRINTS PR00681 Ribosomal protein S1 signature 21 39 3.4E-97 T 13-10-2018 VEA_003020 d37c38ae06c671185c765f4a09d3030e 556 PRINTS PR00681 Ribosomal protein S1 signature 126 143 3.4E-97 T 13-10-2018 VEA_003020 d37c38ae06c671185c765f4a09d3030e 556 PRINTS PR00681 Ribosomal protein S1 signature 330 348 3.4E-97 T 13-10-2018 VEA_003020 d37c38ae06c671185c765f4a09d3030e 556 PRINTS PR00681 Ribosomal protein S1 signature 212 233 3.4E-97 T 13-10-2018 VEA_003020 d37c38ae06c671185c765f4a09d3030e 556 PRINTS PR00681 Ribosomal protein S1 signature 290 309 3.4E-97 T 13-10-2018 VEA_003020 d37c38ae06c671185c765f4a09d3030e 556 PRINTS PR00681 Ribosomal protein S1 signature 39 53 3.4E-97 T 13-10-2018 VEA_003020 d37c38ae06c671185c765f4a09d3030e 556 PRINTS PR00681 Ribosomal protein S1 signature 84 103 3.4E-97 T 13-10-2018 VEA_003020 d37c38ae06c671185c765f4a09d3030e 556 Gene3D G3DSA:2.40.50.140 269 357 1.5E-31 T 13-10-2018 VEA_003020 d37c38ae06c671185c765f4a09d3030e 556 Gene3D G3DSA:2.40.50.140 358 444 1.8E-23 T 13-10-2018 VEA_003020 d37c38ae06c671185c765f4a09d3030e 556 SUPERFAMILY SSF50249 429 539 2.09E-22 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_003020 d37c38ae06c671185c765f4a09d3030e 556 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 3.6E-230 T 13-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VEA_003020 d37c38ae06c671185c765f4a09d3030e 556 PIRSF PIRSF002111 1 534 2.1E-217 T 13-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VEA_003020 d37c38ae06c671185c765f4a09d3030e 556 Pfam PF00575 S1 RNA binding domain 275 347 2.6E-21 T 13-10-2018 IPR003029 S1 domain GO:0003676 VEA_003020 d37c38ae06c671185c765f4a09d3030e 556 Pfam PF00575 S1 RNA binding domain 362 434 1.1E-20 T 13-10-2018 IPR003029 S1 domain GO:0003676 VEA_003020 d37c38ae06c671185c765f4a09d3030e 556 Pfam PF00575 S1 RNA binding domain 18 86 1.5E-6 T 13-10-2018 IPR003029 S1 domain GO:0003676 VEA_003020 d37c38ae06c671185c765f4a09d3030e 556 Pfam PF00575 S1 RNA binding domain 189 260 1.7E-21 T 13-10-2018 IPR003029 S1 domain GO:0003676 VEA_003020 d37c38ae06c671185c765f4a09d3030e 556 Pfam PF00575 S1 RNA binding domain 103 171 5.9E-8 T 13-10-2018 IPR003029 S1 domain GO:0003676 VEA_003020 d37c38ae06c671185c765f4a09d3030e 556 Pfam PF00575 S1 RNA binding domain 449 520 7.2E-14 T 13-10-2018 IPR003029 S1 domain GO:0003676 VEA_003020 d37c38ae06c671185c765f4a09d3030e 556 SMART SM00316 190 260 6.0E-28 T 13-10-2018 IPR022967 RNA-binding domain, S1 VEA_003020 d37c38ae06c671185c765f4a09d3030e 556 SMART SM00316 275 347 1.8E-27 T 13-10-2018 IPR022967 RNA-binding domain, S1 VEA_003020 d37c38ae06c671185c765f4a09d3030e 556 SMART SM00316 103 171 1.2E-7 T 13-10-2018 IPR022967 RNA-binding domain, S1 VEA_003020 d37c38ae06c671185c765f4a09d3030e 556 SMART SM00316 362 434 1.9E-21 T 13-10-2018 IPR022967 RNA-binding domain, S1 VEA_003020 d37c38ae06c671185c765f4a09d3030e 556 SMART SM00316 449 520 1.9E-18 T 13-10-2018 IPR022967 RNA-binding domain, S1 VEA_003020 d37c38ae06c671185c765f4a09d3030e 556 SMART SM00316 19 87 0.0012 T 13-10-2018 IPR022967 RNA-binding domain, S1 VEA_003020 d37c38ae06c671185c765f4a09d3030e 556 Gene3D G3DSA:2.40.50.140 187 268 4.0E-28 T 13-10-2018 VEA_003766 9f4d303326fa9e835b0b6c6bbd7677c9 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 6.8E-7 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEA_003766 9f4d303326fa9e835b0b6c6bbd7677c9 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 6.8E-7 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEA_003766 9f4d303326fa9e835b0b6c6bbd7677c9 214 Gene3D G3DSA:1.10.357.10 2 210 5.7E-54 T 13-10-2018 VEA_003766 9f4d303326fa9e835b0b6c6bbd7677c9 214 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 54 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VEA_003766 9f4d303326fa9e835b0b6c6bbd7677c9 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 3.5E-11 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEA_003766 9f4d303326fa9e835b0b6c6bbd7677c9 214 SUPERFAMILY SSF46689 3 73 1.69E-17 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_003766 9f4d303326fa9e835b0b6c6bbd7677c9 214 SUPERFAMILY SSF48498 80 207 2.22E-40 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VEA_000570 0335d395e89aba178a56b0e83c5a52c9 617 Gene3D G3DSA:1.20.1250.20 6 415 2.9E-23 T 13-10-2018 VEA_000570 0335d395e89aba178a56b0e83c5a52c9 617 Pfam PF07690 Major Facilitator Superfamily 40 380 2.3E-15 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEA_000570 0335d395e89aba178a56b0e83c5a52c9 617 SMART SM00563 450 566 5.7E-31 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VEA_000570 0335d395e89aba178a56b0e83c5a52c9 617 SUPERFAMILY SSF69593 384 614 1.44E-31 T 13-10-2018 VEA_000570 0335d395e89aba178a56b0e83c5a52c9 617 SUPERFAMILY SSF103473 7 420 1.57E-24 T 13-10-2018 IPR036259 MFS transporter superfamily VEA_000570 0335d395e89aba178a56b0e83c5a52c9 617 Pfam PF01553 Acyltransferase 435 563 2.3E-25 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VEA_003539 61ceb0ea40f64bdc143ce6952c984284 374 Pfam PF13692 Glycosyl transferases group 1 216 345 1.4E-6 T 13-10-2018 VEA_003539 61ceb0ea40f64bdc143ce6952c984284 374 SUPERFAMILY SSF53756 71 372 1.31E-20 T 13-10-2018 VEA_003539 61ceb0ea40f64bdc143ce6952c984284 374 Gene3D G3DSA:3.40.50.2000 202 353 3.1E-31 T 13-10-2018 VEA_000161 97f01246fbc215e6ac3c8e58839e4ef6 652 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 364 479 1.1E-11 T 13-10-2018 IPR000014 PAS domain VEA_000161 97f01246fbc215e6ac3c8e58839e4ef6 652 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 247 354 5.0E-6 T 13-10-2018 IPR000014 PAS domain VEA_000161 97f01246fbc215e6ac3c8e58839e4ef6 652 Pfam PF13426 PAS domain 259 350 1.5E-6 T 13-10-2018 IPR000014 PAS domain VEA_000161 97f01246fbc215e6ac3c8e58839e4ef6 652 SMART SM00091 247 313 1.5E-5 T 13-10-2018 IPR000014 PAS domain VEA_000161 97f01246fbc215e6ac3c8e58839e4ef6 652 SMART SM00091 359 425 1.0E-7 T 13-10-2018 IPR000014 PAS domain VEA_000161 97f01246fbc215e6ac3c8e58839e4ef6 652 SMART SM00267 473 644 3.5E-59 T 13-10-2018 IPR000160 GGDEF domain VEA_000161 97f01246fbc215e6ac3c8e58839e4ef6 652 Pfam PF00990 Diguanylate cyclase, GGDEF domain 484 639 1.8E-47 T 13-10-2018 IPR000160 GGDEF domain VEA_000161 97f01246fbc215e6ac3c8e58839e4ef6 652 Gene3D G3DSA:3.30.450.20 238 356 4.4E-11 T 13-10-2018 VEA_000161 97f01246fbc215e6ac3c8e58839e4ef6 652 Gene3D G3DSA:3.30.70.270 477 646 6.7E-56 T 13-10-2018 VEA_000161 97f01246fbc215e6ac3c8e58839e4ef6 652 Pfam PF00989 PAS fold 363 408 1.4E-6 T 13-10-2018 IPR013767 PAS fold GO:0006355 VEA_000161 97f01246fbc215e6ac3c8e58839e4ef6 652 Pfam PF00672 HAMP domain 181 228 5.2E-10 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_000161 97f01246fbc215e6ac3c8e58839e4ef6 652 SUPERFAMILY SSF55073 489 642 3.53E-45 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_000161 97f01246fbc215e6ac3c8e58839e4ef6 652 Pfam PF17152 Periplasmic sensor domain 37 142 6.1E-7 T 13-10-2018 IPR033417 Periplasmic sensor domain CHASE8 VEA_000161 97f01246fbc215e6ac3c8e58839e4ef6 652 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 480 641 4.3E-44 T 13-10-2018 IPR000160 GGDEF domain VEA_000161 97f01246fbc215e6ac3c8e58839e4ef6 652 Gene3D G3DSA:1.20.1480.50 144 237 2.0E-9 T 13-10-2018 VEA_000161 97f01246fbc215e6ac3c8e58839e4ef6 652 SUPERFAMILY SSF158472 182 229 7.19E-8 T 13-10-2018 VEA_000161 97f01246fbc215e6ac3c8e58839e4ef6 652 SMART SM00304 180 233 1.0E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_000161 97f01246fbc215e6ac3c8e58839e4ef6 652 Gene3D G3DSA:3.30.450.20 357 476 6.8E-13 T 13-10-2018 VEA_000161 97f01246fbc215e6ac3c8e58839e4ef6 652 SUPERFAMILY SSF55785 347 463 1.43E-13 T 13-10-2018 IPR035965 PAS domain superfamily VEA_000161 97f01246fbc215e6ac3c8e58839e4ef6 652 SUPERFAMILY SSF55785 234 349 3.81E-9 T 13-10-2018 IPR035965 PAS domain superfamily VEA_001272 4943c118f573d88d03a7647b898430eb 318 Gene3D G3DSA:1.10.8.300 199 315 9.4E-39 T 13-10-2018 VEA_001272 4943c118f573d88d03a7647b898430eb 318 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 36 166 1.1E-62 T 13-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 VEA_001272 4943c118f573d88d03a7647b898430eb 318 Gene3D G3DSA:3.40.50.300 17 183 1.1E-46 T 13-10-2018 VEA_001272 4943c118f573d88d03a7647b898430eb 318 SUPERFAMILY SSF52540 6 290 6.44E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001272 4943c118f573d88d03a7647b898430eb 318 PIRSF PIRSF002849 1 318 2.0E-128 T 13-10-2018 VEA_000375 d22899e77fb8c8b3884d62c35efe83e4 392 Gene3D G3DSA:3.40.47.10 7 275 1.2E-141 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VEA_000375 d22899e77fb8c8b3884d62c35efe83e4 392 PIRSF PIRSF000429 1 392 8.5E-112 T 13-10-2018 IPR002155 Thiolase GO:0016747 VEA_000375 d22899e77fb8c8b3884d62c35efe83e4 392 SUPERFAMILY SSF53901 270 390 6.48E-40 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VEA_000375 d22899e77fb8c8b3884d62c35efe83e4 392 Pfam PF02803 Thiolase, C-terminal domain 270 390 4.6E-44 T 13-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 VEA_000375 d22899e77fb8c8b3884d62c35efe83e4 392 ProSitePatterns PS00099 Thiolases active site. 373 386 - T 13-10-2018 IPR020610 Thiolase, active site GO:0016747 VEA_000375 d22899e77fb8c8b3884d62c35efe83e4 392 SUPERFAMILY SSF53901 5 268 1.25E-74 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VEA_000375 d22899e77fb8c8b3884d62c35efe83e4 392 Pfam PF00108 Thiolase, N-terminal domain 6 260 1.6E-84 T 13-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 VEA_000375 d22899e77fb8c8b3884d62c35efe83e4 392 Gene3D G3DSA:3.40.47.10 127 389 1.2E-141 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VEA_000375 d22899e77fb8c8b3884d62c35efe83e4 392 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 85 103 - T 13-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 VEA_000375 d22899e77fb8c8b3884d62c35efe83e4 392 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 390 9.2E-131 T 13-10-2018 IPR002155 Thiolase GO:0016747 VEA_001005 c7e340744b441ef6e12d3363fcf75b59 194 Gene3D G3DSA:3.40.50.360 1 193 1.2E-48 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VEA_001005 c7e340744b441ef6e12d3363fcf75b59 194 Pfam PF03358 NADPH-dependent FMN reductase 15 137 5.6E-14 T 13-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 VEA_001005 c7e340744b441ef6e12d3363fcf75b59 194 SUPERFAMILY SSF52218 2 191 9.96E-42 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VEA_002369 e62941c57bdf5dbc22bd5c82940e4a69 261 SUPERFAMILY SSF52540 6 240 2.68E-26 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002369 e62941c57bdf5dbc22bd5c82940e4a69 261 Gene3D G3DSA:3.40.50.300 8 163 4.0E-14 T 13-10-2018 VEA_002369 e62941c57bdf5dbc22bd5c82940e4a69 261 Pfam PF13401 AAA domain 22 148 2.5E-24 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_003507 faf97d47f4f2899581e495ee547f1684 195 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 8 188 2.6E-73 T 13-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 VEA_003507 faf97d47f4f2899581e495ee547f1684 195 Pfam PF12804 MobA-like NTP transferase domain 10 158 2.3E-34 T 13-10-2018 IPR025877 MobA-like NTP transferase VEA_003507 faf97d47f4f2899581e495ee547f1684 195 Gene3D G3DSA:3.90.550.10 3 193 1.8E-58 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEA_003507 faf97d47f4f2899581e495ee547f1684 195 SUPERFAMILY SSF53448 7 189 1.71E-35 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEA_003507 faf97d47f4f2899581e495ee547f1684 195 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 5 190 30.234 T 13-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 VEA_001082 c83258285535c67c3165ff94d0e60156 214 Pfam PF13384 Homeodomain-like domain 152 193 1.5E-6 T 13-10-2018 VEA_001082 c83258285535c67c3165ff94d0e60156 214 Gene3D G3DSA:3.40.50.1390 1 125 5.7E-13 T 13-10-2018 VEA_001082 c83258285535c67c3165ff94d0e60156 214 SMART SM00857 3 134 9.0E-7 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VEA_001082 c83258285535c67c3165ff94d0e60156 214 Pfam PF00239 Resolvase, N terminal domain 4 137 6.4E-14 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VEA_001082 c83258285535c67c3165ff94d0e60156 214 SUPERFAMILY SSF53041 1 137 6.28E-18 T 13-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 VEA_003913 170b0bfa9a452b10db9577367d13ac53 442 Gene3D G3DSA:3.40.50.10070 15 176 3.7E-49 T 13-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 VEA_003913 170b0bfa9a452b10db9577367d13ac53 442 SUPERFAMILY SSF52964 21 173 1.96E-40 T 13-10-2018 VEA_003913 170b0bfa9a452b10db9577367d13ac53 442 Pfam PF04052 TolB amino-terminal domain 16 118 2.9E-35 T 13-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 VEA_003913 170b0bfa9a452b10db9577367d13ac53 442 Pfam PF07676 WD40-like Beta Propeller Repeat 214 240 1.4E-8 T 13-10-2018 IPR011659 WD40-like Beta Propeller VEA_003913 170b0bfa9a452b10db9577367d13ac53 442 Pfam PF07676 WD40-like Beta Propeller Repeat 292 328 4.2E-14 T 13-10-2018 IPR011659 WD40-like Beta Propeller VEA_003913 170b0bfa9a452b10db9577367d13ac53 442 Pfam PF07676 WD40-like Beta Propeller Repeat 249 283 4.1E-8 T 13-10-2018 IPR011659 WD40-like Beta Propeller VEA_003913 170b0bfa9a452b10db9577367d13ac53 442 SUPERFAMILY SSF69304 166 440 2.35E-58 T 13-10-2018 VEA_003913 170b0bfa9a452b10db9577367d13ac53 442 Gene3D G3DSA:2.120.10.30 177 442 3.4E-97 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like VEA_003913 170b0bfa9a452b10db9577367d13ac53 442 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 8 439 9.1E-167 T 13-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 VEA_003913 170b0bfa9a452b10db9577367d13ac53 442 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 1 438 51.59 T 13-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 VEA_002550 992cbfd9945ea4bafa61fcb6daf29e56 887 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 4 886 0.0 T 13-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 VEA_002550 992cbfd9945ea4bafa61fcb6daf29e56 887 Gene3D G3DSA:3.40.50.920 707 887 2.2E-71 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VEA_002550 992cbfd9945ea4bafa61fcb6daf29e56 887 PIRSF PIRSF000156 1 887 0.0 T 13-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 VEA_002550 992cbfd9945ea4bafa61fcb6daf29e56 887 Gene3D G3DSA:3.40.50.970 473 706 3.3E-110 T 13-10-2018 VEA_002550 992cbfd9945ea4bafa61fcb6daf29e56 887 SUPERFAMILY SSF52922 702 886 7.22E-59 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VEA_002550 992cbfd9945ea4bafa61fcb6daf29e56 887 SUPERFAMILY SSF52518 56 469 1.2E-139 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VEA_002550 992cbfd9945ea4bafa61fcb6daf29e56 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 104 298 1.9E-9 T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VEA_002550 992cbfd9945ea4bafa61fcb6daf29e56 887 SUPERFAMILY SSF52518 475 701 3.65E-98 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VEA_002550 992cbfd9945ea4bafa61fcb6daf29e56 887 Gene3D G3DSA:3.40.50.970 55 471 4.7E-133 T 13-10-2018 VEA_002420 59df5d0ec3a8f121d6076be43a22115d 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 1.7E-25 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VEA_002420 59df5d0ec3a8f121d6076be43a22115d 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 1.7E-25 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VEA_002420 59df5d0ec3a8f121d6076be43a22115d 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 1.7E-25 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VEA_002420 59df5d0ec3a8f121d6076be43a22115d 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 1.7E-25 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VEA_002420 59df5d0ec3a8f121d6076be43a22115d 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 330 1.2E-55 T 13-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 VEA_002420 59df5d0ec3a8f121d6076be43a22115d 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VEA_002420 59df5d0ec3a8f121d6076be43a22115d 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 332 8.0E-132 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VEA_002420 59df5d0ec3a8f121d6076be43a22115d 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 9.0E-46 T 13-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 VEA_002420 59df5d0ec3a8f121d6076be43a22115d 334 SUPERFAMILY SSF53671 4 333 3.54E-98 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VEA_002420 59df5d0ec3a8f121d6076be43a22115d 334 Gene3D G3DSA:3.40.50.1370 5 329 2.2E-145 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VEA_002420 59df5d0ec3a8f121d6076be43a22115d 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 4.1E-32 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VEA_002420 59df5d0ec3a8f121d6076be43a22115d 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 4.1E-32 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VEA_002420 59df5d0ec3a8f121d6076be43a22115d 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 4.1E-32 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VEA_002420 59df5d0ec3a8f121d6076be43a22115d 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 4.1E-32 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VEA_002420 59df5d0ec3a8f121d6076be43a22115d 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 4.1E-32 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VEA_002420 59df5d0ec3a8f121d6076be43a22115d 334 Gene3D G3DSA:3.40.50.1370 151 319 2.2E-145 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VEA_002420 59df5d0ec3a8f121d6076be43a22115d 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 333 82.617 T 13-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VEA_004206 7523cb37a0a20a42ec22f481b4528ec3 290 Pfam PF00288 GHMP kinases N terminal domain 88 145 4.9E-9 T 13-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 VEA_004206 7523cb37a0a20a42ec22f481b4528ec3 290 SUPERFAMILY SSF54211 6 158 2.96E-44 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEA_004206 7523cb37a0a20a42ec22f481b4528ec3 290 SUPERFAMILY SSF55060 162 277 1.49E-34 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VEA_004206 7523cb37a0a20a42ec22f481b4528ec3 290 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 5 279 1.9E-92 T 13-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 VEA_004206 7523cb37a0a20a42ec22f481b4528ec3 290 Pfam PF08544 GHMP kinases C terminal 204 260 1.5E-6 T 13-10-2018 IPR013750 GHMP kinase, C-terminal domain VEA_004206 7523cb37a0a20a42ec22f481b4528ec3 290 PIRSF PIRSF010376 4 280 3.3E-85 T 13-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 VEA_004206 7523cb37a0a20a42ec22f481b4528ec3 290 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 6 267 30.897 T 13-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 VEA_004206 7523cb37a0a20a42ec22f481b4528ec3 290 Gene3D G3DSA:3.30.230.10 2 160 1.5E-53 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VEA_004206 7523cb37a0a20a42ec22f481b4528ec3 290 Gene3D G3DSA:3.30.70.890 162 280 1.9E-28 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VEA_000391 f10d3174034c2eac3adb612baad5b072 218 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 87 185 2.9E-12 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEA_000391 f10d3174034c2eac3adb612baad5b072 218 Gene3D G3DSA:1.10.150.240 15 83 7.2E-25 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VEA_000391 f10d3174034c2eac3adb612baad5b072 218 Gene3D G3DSA:3.40.50.1000 84 216 5.9E-34 T 13-10-2018 IPR023214 HAD superfamily VEA_000391 f10d3174034c2eac3adb612baad5b072 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 184 2.9E-32 T 13-10-2018 VEA_000391 f10d3174034c2eac3adb612baad5b072 218 SUPERFAMILY SSF56784 4 189 2.62E-46 T 13-10-2018 IPR036412 HAD-like superfamily VEA_000391 f10d3174034c2eac3adb612baad5b072 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 4.7E-11 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEA_000391 f10d3174034c2eac3adb612baad5b072 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 4.7E-11 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEA_000391 f10d3174034c2eac3adb612baad5b072 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 147 167 4.7E-11 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEA_000391 f10d3174034c2eac3adb612baad5b072 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 98 111 4.7E-11 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEA_001668 96e33862426764dc0d6a1f62d2ed649c 159 SUPERFAMILY SSF53597 1 159 1.37E-57 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VEA_001668 96e33862426764dc0d6a1f62d2ed649c 159 PIRSF PIRSF000194 1 159 1.6E-62 T 13-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 VEA_001668 96e33862426764dc0d6a1f62d2ed649c 159 PRINTS PR00070 Dihydrofolate reductase signature 28 36 2.9E-14 T 13-10-2018 VEA_001668 96e33862426764dc0d6a1f62d2ed649c 159 PRINTS PR00070 Dihydrofolate reductase signature 92 106 2.9E-14 T 13-10-2018 VEA_001668 96e33862426764dc0d6a1f62d2ed649c 159 PRINTS PR00070 Dihydrofolate reductase signature 14 24 2.9E-14 T 13-10-2018 VEA_001668 96e33862426764dc0d6a1f62d2ed649c 159 PRINTS PR00070 Dihydrofolate reductase signature 41 52 2.9E-14 T 13-10-2018 VEA_001668 96e33862426764dc0d6a1f62d2ed649c 159 Pfam PF00186 Dihydrofolate reductase 3 159 1.0E-61 T 13-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 VEA_001668 96e33862426764dc0d6a1f62d2ed649c 159 Gene3D G3DSA:3.40.430.10 1 159 2.3E-60 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VEA_001503 65b771d68e560f3dd63dae9082372ce6 212 Pfam PF01470 Pyroglutamyl peptidase 2 198 5.4E-78 T 13-10-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like MetaCyc: PWY-7942 VEA_001503 65b771d68e560f3dd63dae9082372ce6 212 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 130 144 - T 13-10-2018 IPR033694 Pyroglutamyl peptidase I, Cys active site MetaCyc: PWY-7942 VEA_001503 65b771d68e560f3dd63dae9082372ce6 212 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 69 85 - T 13-10-2018 IPR033693 Pyroglutamyl peptidase I, Glu active site MetaCyc: PWY-7942 VEA_001503 65b771d68e560f3dd63dae9082372ce6 212 SUPERFAMILY SSF53182 1 203 1.01E-71 T 13-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 VEA_001503 65b771d68e560f3dd63dae9082372ce6 212 PIRSF PIRSF015592 1 210 3.6E-81 T 13-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 VEA_001503 65b771d68e560f3dd63dae9082372ce6 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 80 100 2.2E-45 T 13-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 VEA_001503 65b771d68e560f3dd63dae9082372ce6 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 132 148 2.2E-45 T 13-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 VEA_001503 65b771d68e560f3dd63dae9082372ce6 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 62 74 2.2E-45 T 13-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 VEA_001503 65b771d68e560f3dd63dae9082372ce6 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 4 27 2.2E-45 T 13-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 VEA_001503 65b771d68e560f3dd63dae9082372ce6 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 160 172 2.2E-45 T 13-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 VEA_001503 65b771d68e560f3dd63dae9082372ce6 212 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 2 198 38.919 T 13-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 VEA_001503 65b771d68e560f3dd63dae9082372ce6 212 Gene3D G3DSA:3.40.630.20 1 212 2.4E-78 T 13-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 VEA_001503 65b771d68e560f3dd63dae9082372ce6 212 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 3 209 2.5E-76 T 13-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 VEA_002674 118082ec4c13e0c4f1c73979b618c8c3 263 Pfam PF00455 DeoR C terminal sensor domain 74 232 3.2E-50 T 13-10-2018 IPR014036 DeoR C-terminal sensor domain VEA_002674 118082ec4c13e0c4f1c73979b618c8c3 263 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.7E-12 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEA_002674 118082ec4c13e0c4f1c73979b618c8c3 263 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.7E-12 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEA_002674 118082ec4c13e0c4f1c73979b618c8c3 263 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 13-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VEA_002674 118082ec4c13e0c4f1c73979b618c8c3 263 SUPERFAMILY SSF46785 5 77 4.83E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_002674 118082ec4c13e0c4f1c73979b618c8c3 263 Gene3D G3DSA:1.10.10.10 1 67 1.9E-8 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_002674 118082ec4c13e0c4f1c73979b618c8c3 263 SMART SM01134 72 234 2.9E-67 T 13-10-2018 VEA_002674 118082ec4c13e0c4f1c73979b618c8c3 263 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 6.6E-24 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEA_002674 118082ec4c13e0c4f1c73979b618c8c3 263 SMART SM00420 6 58 1.2E-27 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEA_002674 118082ec4c13e0c4f1c73979b618c8c3 263 Gene3D G3DSA:3.30.750.70 70 130 5.3E-8 T 13-10-2018 VEA_002674 118082ec4c13e0c4f1c73979b618c8c3 263 SUPERFAMILY SSF100950 74 234 7.78E-29 T 13-10-2018 IPR037171 NagB/RpiA transferase-like VEA_002900 01c2ef9d7071e0b9e150bdcaf25f8a67 131 SUPERFAMILY SSF54593 2 127 6.58E-29 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEA_002900 01c2ef9d7071e0b9e150bdcaf25f8a67 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 123 4.1E-16 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VEA_002900 01c2ef9d7071e0b9e150bdcaf25f8a67 131 Gene3D G3DSA:3.10.180.10 1 129 8.3E-35 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEA_002463 1591593439135f1c9e3f10e19fc8df52 243 SUPERFAMILY SSF75217 75 242 2.09E-53 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases VEA_002463 1591593439135f1c9e3f10e19fc8df52 243 Gene3D G3DSA:3.40.1280.10 74 243 2.1E-66 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VEA_002463 1591593439135f1c9e3f10e19fc8df52 243 PIRSF PIRSF015601 2 242 5.1E-58 T 13-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 VEA_002463 1591593439135f1c9e3f10e19fc8df52 243 Gene3D G3DSA:2.40.240.20 1 71 1.4E-21 T 13-10-2018 VEA_002463 1591593439135f1c9e3f10e19fc8df52 243 SUPERFAMILY SSF88697 2 70 9.94E-17 T 13-10-2018 IPR015947 PUA-like superfamily VEA_002463 1591593439135f1c9e3f10e19fc8df52 243 Pfam PF04452 RNA methyltransferase 20 236 8.1E-75 T 13-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 VEA_002463 1591593439135f1c9e3f10e19fc8df52 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 4.4E-86 T 13-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 VEA_001983 45b1f6d449891c6fb3947265a123a06e 494 SUPERFAMILY SSF51735 28 209 1.34E-57 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_001983 45b1f6d449891c6fb3947265a123a06e 494 Gene3D G3DSA:3.40.50.720 1 208 1.1E-86 T 13-10-2018 VEA_001983 45b1f6d449891c6fb3947265a123a06e 494 SUPERFAMILY SSF48179 210 341 1.7E-38 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VEA_001983 45b1f6d449891c6fb3947265a123a06e 494 SUPERFAMILY SSF48179 348 487 1.22E-42 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VEA_001983 45b1f6d449891c6fb3947265a123a06e 494 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 1.2E-59 T 13-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 VEA_001983 45b1f6d449891c6fb3947265a123a06e 494 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 22 488 36.992 T 13-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 VEA_001983 45b1f6d449891c6fb3947265a123a06e 494 Gene3D G3DSA:1.10.1040.10 209 494 4.2E-120 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VEA_001983 45b1f6d449891c6fb3947265a123a06e 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 355 485 5.6E-17 T 13-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 VEA_001983 45b1f6d449891c6fb3947265a123a06e 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 341 2.6E-24 T 13-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 VEA_001983 45b1f6d449891c6fb3947265a123a06e 494 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 367 3.1E-124 T 13-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 VEA_004191 8e3f14ee1225d501a2aa686a1baba9ff 883 SUPERFAMILY SSF55545 208 331 4.19E-24 T 13-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 VEA_004191 8e3f14ee1225d501a2aa686a1baba9ff 883 SUPERFAMILY SSF49384 26 198 4.39E-66 T 13-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 VEA_004191 8e3f14ee1225d501a2aa686a1baba9ff 883 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 804 879 6.9E-28 T 13-10-2018 IPR004867 Chitobiase C-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VEA_004191 8e3f14ee1225d501a2aa686a1baba9ff 883 Gene3D G3DSA:3.30.379.10 204 329 2.5E-24 T 13-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 VEA_004191 8e3f14ee1225d501a2aa686a1baba9ff 883 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 332 764 2.5E-109 T 13-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VEA_004191 8e3f14ee1225d501a2aa686a1baba9ff 883 SUPERFAMILY SSF51445 332 772 1.77E-143 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VEA_004191 8e3f14ee1225d501a2aa686a1baba9ff 883 Gene3D G3DSA:3.20.20.80 330 817 8.9E-165 T 13-10-2018 VEA_004191 8e3f14ee1225d501a2aa686a1baba9ff 883 Gene3D G3DSA:2.60.40.10 818 882 2.1E-23 T 13-10-2018 IPR013783 Immunoglobulin-like fold VEA_004191 8e3f14ee1225d501a2aa686a1baba9ff 883 Pfam PF03173 Putative carbohydrate binding domain 35 193 1.0E-62 T 13-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VEA_004191 8e3f14ee1225d501a2aa686a1baba9ff 883 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 211 329 7.2E-14 T 13-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal VEA_004191 8e3f14ee1225d501a2aa686a1baba9ff 883 SMART SM01081 34 195 2.4E-94 T 13-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VEA_004191 8e3f14ee1225d501a2aa686a1baba9ff 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 326 343 4.0E-48 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VEA_004191 8e3f14ee1225d501a2aa686a1baba9ff 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 355 376 4.0E-48 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VEA_004191 8e3f14ee1225d501a2aa686a1baba9ff 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 728 744 4.0E-48 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VEA_004191 8e3f14ee1225d501a2aa686a1baba9ff 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 746 763 4.0E-48 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VEA_004191 8e3f14ee1225d501a2aa686a1baba9ff 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 432 449 4.0E-48 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VEA_004191 8e3f14ee1225d501a2aa686a1baba9ff 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 526 539 4.0E-48 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VEA_004191 8e3f14ee1225d501a2aa686a1baba9ff 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 292 312 4.0E-48 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VEA_004191 8e3f14ee1225d501a2aa686a1baba9ff 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 499 517 4.0E-48 T 13-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VEA_004191 8e3f14ee1225d501a2aa686a1baba9ff 883 Gene3D G3DSA:2.60.40.290 25 167 8.9E-56 T 13-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 VEA_004191 8e3f14ee1225d501a2aa686a1baba9ff 883 SUPERFAMILY SSF81296 781 882 6.44E-37 T 13-10-2018 IPR014756 Immunoglobulin E-set VEA_004427 c646a79d857f7807124483edd4513e1d 283 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 283 1.2E-43 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VEA_004427 c646a79d857f7807124483edd4513e1d 283 ProSitePatterns PS00091 Thymidylate synthase active site. 140 168 - T 13-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VEA_004427 c646a79d857f7807124483edd4513e1d 283 PRINTS PR00108 Thymidylate synthase family signature 211 228 1.5E-14 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VEA_004427 c646a79d857f7807124483edd4513e1d 283 PRINTS PR00108 Thymidylate synthase family signature 44 65 1.5E-14 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VEA_004427 c646a79d857f7807124483edd4513e1d 283 PRINTS PR00108 Thymidylate synthase family signature 173 199 1.5E-14 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VEA_004427 c646a79d857f7807124483edd4513e1d 283 PRINTS PR00108 Thymidylate synthase family signature 129 148 1.5E-14 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VEA_004427 c646a79d857f7807124483edd4513e1d 283 Hamap MF_00008 Thymidylate synthase [thyA]. 1 283 33.561 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VEA_004427 c646a79d857f7807124483edd4513e1d 283 SUPERFAMILY SSF55831 2 283 9.03E-93 T 13-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VEA_004427 c646a79d857f7807124483edd4513e1d 283 Gene3D G3DSA:3.30.572.10 1 283 1.8E-81 T 13-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VEA_004427 c646a79d857f7807124483edd4513e1d 283 Pfam PF00303 Thymidylate synthase 2 283 3.0E-75 T 13-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VEA_004135 c6be3810807d536c9bfe40996708cb90 320 Pfam PF00762 Ferrochelatase 6 319 7.8E-113 T 13-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 VEA_004135 c6be3810807d536c9bfe40996708cb90 320 Gene3D G3DSA:3.40.50.1400 8 320 4.0E-97 T 13-10-2018 VEA_004135 c6be3810807d536c9bfe40996708cb90 320 Gene3D G3DSA:3.40.50.1400 163 301 4.0E-97 T 13-10-2018 VEA_004135 c6be3810807d536c9bfe40996708cb90 320 SUPERFAMILY SSF53800 4 319 1.21E-107 T 13-10-2018 VEA_004135 c6be3810807d536c9bfe40996708cb90 320 Hamap MF_00323 Ferrochelatase [hemH]. 5 320 39.142 T 13-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 VEA_004135 c6be3810807d536c9bfe40996708cb90 320 ProSitePatterns PS00534 Ferrochelatase signature. 189 207 - T 13-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 VEA_004135 c6be3810807d536c9bfe40996708cb90 320 TIGRFAM TIGR00109 hemH: ferrochelatase 4 320 1.1E-109 T 13-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 VEA_001211 7e58f9d3b27814e4af9ecbfd57154fd1 776 SMART SM00267 338 510 4.5E-56 T 13-10-2018 IPR000160 GGDEF domain VEA_001211 7e58f9d3b27814e4af9ecbfd57154fd1 776 SUPERFAMILY SSF141868 525 772 6.15E-84 T 13-10-2018 IPR035919 EAL domain superfamily VEA_001211 7e58f9d3b27814e4af9ecbfd57154fd1 776 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 345 507 1.2E-40 T 13-10-2018 IPR000160 GGDEF domain VEA_001211 7e58f9d3b27814e4af9ecbfd57154fd1 776 Gene3D G3DSA:3.20.20.450 523 774 7.6E-94 T 13-10-2018 IPR035919 EAL domain superfamily VEA_001211 7e58f9d3b27814e4af9ecbfd57154fd1 776 Gene3D G3DSA:3.30.70.270 343 522 9.4E-57 T 13-10-2018 VEA_001211 7e58f9d3b27814e4af9ecbfd57154fd1 776 SMART SM00052 520 765 2.2E-105 T 13-10-2018 IPR001633 EAL domain VEA_001211 7e58f9d3b27814e4af9ecbfd57154fd1 776 Pfam PF00990 Diguanylate cyclase, GGDEF domain 349 505 3.3E-47 T 13-10-2018 IPR000160 GGDEF domain VEA_001211 7e58f9d3b27814e4af9ecbfd57154fd1 776 SUPERFAMILY SSF55073 354 512 2.28E-50 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_001211 7e58f9d3b27814e4af9ecbfd57154fd1 776 Pfam PF00563 EAL domain 526 760 6.0E-68 T 13-10-2018 IPR001633 EAL domain VEA_003945 530fc1e3376016806bb598a006aec7f9 245 Gene3D G3DSA:3.40.50.1820 1 243 3.0E-38 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_003945 530fc1e3376016806bb598a006aec7f9 245 PRINTS PR00412 Epoxide hydrolase signature 183 199 1.3E-5 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VEA_003945 530fc1e3376016806bb598a006aec7f9 245 PRINTS PR00412 Epoxide hydrolase signature 215 237 1.3E-5 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VEA_003945 530fc1e3376016806bb598a006aec7f9 245 PRINTS PR00412 Epoxide hydrolase signature 2 20 1.3E-5 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VEA_003945 530fc1e3376016806bb598a006aec7f9 245 Pfam PF00561 alpha/beta hydrolase fold 1 99 2.2E-19 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEA_003945 530fc1e3376016806bb598a006aec7f9 245 SUPERFAMILY SSF53474 1 238 3.59E-41 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_000702 485e7c339966ece6827e88ddf32b7bc3 129 SUPERFAMILY SSF54593 1 128 3.76E-24 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEA_000702 485e7c339966ece6827e88ddf32b7bc3 129 Gene3D G3DSA:3.10.180.10 1 129 7.1E-32 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEA_000702 485e7c339966ece6827e88ddf32b7bc3 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 127 2.7E-11 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VEA_001040 e080d6b8ffac3b04d044927648f852ab 318 Gene3D G3DSA:1.10.10.10 2 86 6.5E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001040 e080d6b8ffac3b04d044927648f852ab 318 SUPERFAMILY SSF46785 4 88 5.01E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_001040 e080d6b8ffac3b04d044927648f852ab 318 SUPERFAMILY SSF53850 90 295 8.53E-41 T 13-10-2018 VEA_001040 e080d6b8ffac3b04d044927648f852ab 318 Pfam PF03466 LysR substrate binding domain 89 293 1.2E-37 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_001040 e080d6b8ffac3b04d044927648f852ab 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.9E-19 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_001040 e080d6b8ffac3b04d044927648f852ab 318 Gene3D G3DSA:3.40.190.290 91 294 3.2E-61 T 13-10-2018 VEA_002625 d95d34c7a82ed0a19fb683a39fdc1cfa 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site VEA_002625 d95d34c7a82ed0a19fb683a39fdc1cfa 529 Gene3D G3DSA:3.40.50.300 110 275 1.8E-112 T 13-10-2018 VEA_002625 d95d34c7a82ed0a19fb683a39fdc1cfa 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 3.3E-10 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_002625 d95d34c7a82ed0a19fb683a39fdc1cfa 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 3.3E-10 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_002625 d95d34c7a82ed0a19fb683a39fdc1cfa 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 3.3E-10 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_002625 d95d34c7a82ed0a19fb683a39fdc1cfa 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 3.3E-10 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_002625 d95d34c7a82ed0a19fb683a39fdc1cfa 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 5 529 1.2E-297 T 13-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 VEA_002625 d95d34c7a82ed0a19fb683a39fdc1cfa 529 SUPERFAMILY SSF54980 393 468 2.77E-17 T 13-10-2018 IPR035647 EF-G domain III/V-like VEA_002625 d95d34c7a82ed0a19fb683a39fdc1cfa 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 4.5E-46 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_002625 d95d34c7a82ed0a19fb683a39fdc1cfa 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 154 4.6E-19 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VEA_002625 d95d34c7a82ed0a19fb683a39fdc1cfa 529 Gene3D G3DSA:3.30.70.3280 390 529 9.8E-53 T 13-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily VEA_002625 d95d34c7a82ed0a19fb683a39fdc1cfa 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 1.2E-7 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VEA_002625 d95d34c7a82ed0a19fb683a39fdc1cfa 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 51.863 T 13-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 VEA_002625 d95d34c7a82ed0a19fb683a39fdc1cfa 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 9.3E-47 T 13-10-2018 IPR032090 Peptide chain release factor 3, C-terminal VEA_002625 d95d34c7a82ed0a19fb683a39fdc1cfa 529 SUPERFAMILY SSF52540 10 277 7.12E-85 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002625 d95d34c7a82ed0a19fb683a39fdc1cfa 529 Gene3D G3DSA:3.40.50.300 72 379 1.8E-112 T 13-10-2018 VEA_002625 d95d34c7a82ed0a19fb683a39fdc1cfa 529 SUPERFAMILY SSF50447 262 393 3.53E-27 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VEA_002213 399898e9ed1aa938ab05a33a31ccb470 435 PIRSF PIRSF004539 1 435 5.6E-177 T 13-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VEA_002213 399898e9ed1aa938ab05a33a31ccb470 435 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 434 1.9E-179 T 13-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VEA_002213 399898e9ed1aa938ab05a33a31ccb470 435 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 367 3.5E-145 T 13-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VEA_002670 236e4c4e6f44e8d21c36688f4343668c 183 Gene3D G3DSA:3.10.490.10 1 128 4.8E-9 T 13-10-2018 VEA_002670 236e4c4e6f44e8d21c36688f4343668c 183 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 108 1.1E-8 T 13-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like VEA_002670 236e4c4e6f44e8d21c36688f4343668c 183 SUPERFAMILY SSF110857 1 123 1.01E-15 T 13-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily VEA_001457 9cb1f024aed11692de5ddf94295ca1bb 119 Gene3D G3DSA:3.40.30.10 27 119 4.6E-14 T 13-10-2018 VEA_001457 9cb1f024aed11692de5ddf94295ca1bb 119 SUPERFAMILY SSF52833 41 118 3.53E-18 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VEA_001457 9cb1f024aed11692de5ddf94295ca1bb 119 Pfam PF00462 Glutaredoxin 43 96 8.2E-11 T 13-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VEA_003238 395fe80c07764cce5869b71af53756dd 1023 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 130 224 4.2E-15 T 13-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 VEA_003238 395fe80c07764cce5869b71af53756dd 1023 Gene3D G3DSA:3.40.50.300 512 759 9.8E-24 T 13-10-2018 VEA_003238 395fe80c07764cce5869b71af53756dd 1023 Gene3D G3DSA:3.40.50.300 289 504 3.2E-25 T 13-10-2018 VEA_003238 395fe80c07764cce5869b71af53756dd 1023 Pfam PF04851 Type III restriction enzyme, res subunit 289 488 2.5E-14 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VEA_003238 395fe80c07764cce5869b71af53756dd 1023 Gene3D G3DSA:3.90.1570.50 122 279 2.3E-12 T 13-10-2018 VEA_003238 395fe80c07764cce5869b71af53756dd 1023 SMART SM00487 285 515 7.6E-10 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEA_003238 395fe80c07764cce5869b71af53756dd 1023 SUPERFAMILY SSF52540 256 539 3.04E-23 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002703 5d1aeb39befd787fd4905e5461028bcd 181 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 22 178 8.2E-44 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VEA_002703 5d1aeb39befd787fd4905e5461028bcd 181 Gene3D G3DSA:2.40.100.10 18 181 4.9E-59 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily VEA_002703 5d1aeb39befd787fd4905e5461028bcd 181 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 56 73 - T 13-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 VEA_002703 5d1aeb39befd787fd4905e5461028bcd 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 35 50 1.1E-10 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VEA_002703 5d1aeb39befd787fd4905e5461028bcd 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 61 73 1.1E-10 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VEA_002703 5d1aeb39befd787fd4905e5461028bcd 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 1.1E-10 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VEA_002703 5d1aeb39befd787fd4905e5461028bcd 181 SUPERFAMILY SSF50891 18 180 1.61E-53 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily VEA_002703 5d1aeb39befd787fd4905e5461028bcd 181 PIRSF PIRSF001467 5 181 8.8E-25 T 13-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 VEA_003481 5f413e8a748d490473156e556997d5d7 371 SUPERFAMILY SSF50331 244 366 1.08E-8 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VEA_003481 5f413e8a748d490473156e556997d5d7 371 Gene3D G3DSA:3.40.50.300 11 229 2.5E-69 T 13-10-2018 VEA_003481 5f413e8a748d490473156e556997d5d7 371 Gene3D G3DSA:2.40.50.940 230 292 1.2E-11 T 13-10-2018 VEA_003481 5f413e8a748d490473156e556997d5d7 371 Pfam PF00005 ABC transporter 29 168 1.6E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_003481 5f413e8a748d490473156e556997d5d7 371 Gene3D G3DSA:2.40.50.140 293 310 1.2E-11 T 13-10-2018 VEA_003481 5f413e8a748d490473156e556997d5d7 371 SMART SM00382 36 219 3.7E-20 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_003481 5f413e8a748d490473156e556997d5d7 371 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 42 365 5.6E-156 T 13-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 VEA_003481 5f413e8a748d490473156e556997d5d7 371 SUPERFAMILY SSF52540 12 251 4.23E-88 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003481 5f413e8a748d490473156e556997d5d7 371 Pfam PF08402 TOBE domain 286 365 7.7E-12 T 13-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VEA_003481 5f413e8a748d490473156e556997d5d7 371 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_003086 a17eb11e9bfe0b23f5793467ca2f3d75 336 Pfam PF00591 Glycosyl transferase family, a/b domain 76 326 2.4E-106 T 13-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEA_003086 a17eb11e9bfe0b23f5793467ca2f3d75 336 Pfam PF02885 Glycosyl transferase family, helical bundle domain 7 67 5.4E-17 T 13-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEA_003086 a17eb11e9bfe0b23f5793467ca2f3d75 336 SUPERFAMILY SSF47648 5 71 5.23E-19 T 13-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEA_003086 a17eb11e9bfe0b23f5793467ca2f3d75 336 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 7 335 39.982 T 13-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 VEA_003086 a17eb11e9bfe0b23f5793467ca2f3d75 336 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 10 333 2.7E-129 T 13-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 VEA_003086 a17eb11e9bfe0b23f5793467ca2f3d75 336 Gene3D G3DSA:1.20.970.10 14 187 5.1E-125 T 13-10-2018 VEA_003086 a17eb11e9bfe0b23f5793467ca2f3d75 336 Gene3D G3DSA:3.40.1030.10 71 325 5.1E-125 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEA_003086 a17eb11e9bfe0b23f5793467ca2f3d75 336 SUPERFAMILY SSF52418 74 333 8.63E-95 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEA_003870 b08123f3e6f76adf52f628f366e7e871 383 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 4 380 45.995 T 13-10-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 VEA_003870 b08123f3e6f76adf52f628f366e7e871 383 SUPERFAMILY SSF53383 4 379 8.42E-98 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_003870 b08123f3e6f76adf52f628f366e7e871 383 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 22 376 1.4E-135 T 13-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 VEA_003870 b08123f3e6f76adf52f628f366e7e871 383 Pfam PF00155 Aminotransferase class I and II 42 372 1.2E-50 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VEA_003870 b08123f3e6f76adf52f628f366e7e871 383 Gene3D G3DSA:3.40.640.10 58 283 1.3E-120 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_003870 b08123f3e6f76adf52f628f366e7e871 383 Gene3D G3DSA:3.90.1150.10 42 372 1.3E-120 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEA_001648 38f5173af0c222f0f53ff0c1c83491d2 164 Pfam PF13710 ACT domain 11 73 1.8E-17 T 13-10-2018 VEA_001648 38f5173af0c222f0f53ff0c1c83491d2 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 75 4.0E-37 T 13-10-2018 VEA_001648 38f5173af0c222f0f53ff0c1c83491d2 164 Gene3D G3DSA:3.30.70.1150 80 157 8.6E-28 T 13-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal VEA_001648 38f5173af0c222f0f53ff0c1c83491d2 164 SUPERFAMILY SSF55021 79 162 1.11E-26 T 13-10-2018 VEA_001648 38f5173af0c222f0f53ff0c1c83491d2 164 SUPERFAMILY SSF55021 1 75 6.87E-23 T 13-10-2018 VEA_001648 38f5173af0c222f0f53ff0c1c83491d2 164 Pfam PF10369 Small subunit of acetolactate synthase 84 158 4.7E-25 T 13-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 VEA_001648 38f5173af0c222f0f53ff0c1c83491d2 164 Gene3D G3DSA:3.30.70.260 1 79 4.7E-34 T 13-10-2018 VEA_001648 38f5173af0c222f0f53ff0c1c83491d2 164 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 159 4.7E-64 T 13-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 VEA_002868 18ec380658c27942a80d2243444e7b63 174 SUPERFAMILY SSF52218 1 173 1.09E-35 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VEA_002868 18ec380658c27942a80d2243444e7b63 174 Gene3D G3DSA:3.40.50.360 1 174 3.7E-33 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VEA_002868 18ec380658c27942a80d2243444e7b63 174 Pfam PF03358 NADPH-dependent FMN reductase 1 138 5.3E-26 T 13-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 VEA_000712 dca82ba7efb9ec0443c5b7c68187517f 467 TIGRFAM TIGR00908 2A0305: ethanolamine permease 10 450 4.6E-147 T 13-10-2018 IPR004757 Ethanolamine permease VEA_000712 dca82ba7efb9ec0443c5b7c68187517f 467 Gene3D G3DSA:1.20.1740.10 14 459 1.6E-50 T 13-10-2018 VEA_000712 dca82ba7efb9ec0443c5b7c68187517f 467 PIRSF PIRSF006060 1 464 4.7E-66 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VEA_000712 dca82ba7efb9ec0443c5b7c68187517f 467 Pfam PF13520 Amino acid permease 24 409 1.7E-38 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VEA_002304 c0a7fcb6883057a1dd7846e996c421ce 106 Hamap MF_00744 Met repressor [metJ]. 1 105 35.001 T 13-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 VEA_002304 c0a7fcb6883057a1dd7846e996c421ce 106 Pfam PF01340 Met Apo-repressor, MetJ 3 99 1.9E-59 T 13-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 VEA_002304 c0a7fcb6883057a1dd7846e996c421ce 106 Gene3D G3DSA:1.10.140.10 2 105 1.2E-56 T 13-10-2018 IPR023453 Methionine repressor MetJ domain superfamily VEA_002304 c0a7fcb6883057a1dd7846e996c421ce 106 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 5.0E-48 T 13-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 VEA_002304 c0a7fcb6883057a1dd7846e996c421ce 106 SUPERFAMILY SSF47598 3 104 5.78E-57 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 VEA_000277 619b79234ff1256929c0c8d52472e27f 128 Pfam PF01124 MAPEG family 3 118 1.3E-23 T 13-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein VEA_000277 619b79234ff1256929c0c8d52472e27f 128 Gene3D G3DSA:1.20.120.550 1 126 3.7E-28 T 13-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily VEA_000277 619b79234ff1256929c0c8d52472e27f 128 SUPERFAMILY SSF161084 2 127 9.16E-30 T 13-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily VEA_000875 cce9e830b6ada2367e0f07e5c87ce5cd 156 Gene3D G3DSA:3.40.630.30 5 156 7.4E-37 T 13-10-2018 VEA_000875 cce9e830b6ada2367e0f07e5c87ce5cd 156 Pfam PF00583 Acetyltransferase (GNAT) family 37 145 2.4E-17 T 13-10-2018 IPR000182 GNAT domain VEA_000875 cce9e830b6ada2367e0f07e5c87ce5cd 156 SUPERFAMILY SSF55729 1 153 5.48E-33 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_001497 2fdee8759795f640959aa8c2e5a25bb6 137 Pfam PF09905 DNA-binding protein VF530 13 74 3.2E-31 T 13-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 VEA_001497 2fdee8759795f640959aa8c2e5a25bb6 137 Gene3D G3DSA:1.10.720.30 20 79 9.2E-27 T 13-10-2018 IPR036361 SAP domain superfamily VEA_001667 ac35db023789a38be3b2ac3b2d464b0e 268 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 266 1.6E-118 T 13-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 VEA_001667 ac35db023789a38be3b2ac3b2d464b0e 268 PIRSF PIRSF000903 1 268 1.6E-122 T 13-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 VEA_001667 ac35db023789a38be3b2ac3b2d464b0e 268 Gene3D G3DSA:3.60.21.10 1 267 1.6E-78 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like VEA_001667 ac35db023789a38be3b2ac3b2d464b0e 268 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 268 47.114 T 13-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 VEA_001667 ac35db023789a38be3b2ac3b2d464b0e 268 SUPERFAMILY SSF56300 3 258 1.11E-57 T 13-10-2018 VEA_001667 ac35db023789a38be3b2ac3b2d464b0e 268 Pfam PF00149 Calcineurin-like phosphoesterase 4 127 1.3E-13 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VEA_003742 33894760bb17143b6904af71ed5ff125 411 Gene3D G3DSA:3.90.1150.10 24 405 5.6E-136 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEA_003742 33894760bb17143b6904af71ed5ff125 411 SUPERFAMILY SSF53383 3 410 2.72E-95 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_003742 33894760bb17143b6904af71ed5ff125 411 Gene3D G3DSA:3.40.640.10 33 289 5.6E-136 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_003742 33894760bb17143b6904af71ed5ff125 411 Pfam PF00266 Aminotransferase class-V 26 401 3.6E-68 T 13-10-2018 IPR000192 Aminotransferase class V domain VEA_003742 33894760bb17143b6904af71ed5ff125 411 TIGRFAM TIGR01976 am_tr_V_VC1184: cysteine desulfurase family protein 4 404 7.2E-166 T 13-10-2018 IPR011340 Cysteine desulfurase-related VEA_004438 5e05e7463910d3e7b8c1a4cab826bc59 260 Gene3D G3DSA:3.30.160.20 121 216 5.8E-97 T 13-10-2018 VEA_004438 5e05e7463910d3e7b8c1a4cab826bc59 260 Pfam PF00472 RF-1 domain 124 232 1.0E-40 T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VEA_004438 5e05e7463910d3e7b8c1a4cab826bc59 260 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 258 2.9E-140 T 13-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 VEA_004438 5e05e7463910d3e7b8c1a4cab826bc59 260 Gene3D G3DSA:3.30.70.1660 25 253 5.8E-97 T 13-10-2018 VEA_004438 5e05e7463910d3e7b8c1a4cab826bc59 260 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 140 156 - T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VEA_004438 5e05e7463910d3e7b8c1a4cab826bc59 260 SUPERFAMILY SSF75620 2 257 9.94E-118 T 13-10-2018 VEA_004438 5e05e7463910d3e7b8c1a4cab826bc59 260 Pfam PF03462 PCRF domain 1 114 4.6E-45 T 13-10-2018 IPR005139 Peptide chain release factor GO:0006415 VEA_004438 5e05e7463910d3e7b8c1a4cab826bc59 260 SMART SM00937 1 90 5.1E-39 T 13-10-2018 IPR005139 Peptide chain release factor GO:0006415 VEA_002273 364c4c2b99ddd212c1b19e095068cf2b 984 SUPERFAMILY SSF56219 473 844 1.17E-33 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VEA_002273 364c4c2b99ddd212c1b19e095068cf2b 984 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 478 836 9.2E-8 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VEA_002273 364c4c2b99ddd212c1b19e095068cf2b 984 Pfam PF00932 Lamin Tail Domain 20 129 1.5E-14 T 13-10-2018 IPR001322 Lamin tail domain VEA_002273 364c4c2b99ddd212c1b19e095068cf2b 984 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 963 983 0.0015 T 13-10-2018 IPR020008 GlyGly-CTERM domain VEA_002401 a74826386b61bab5077d8f9813734bb6 122 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 25 41 - T 13-10-2018 IPR002178 PTS EIIA type-2 domain VEA_002401 a74826386b61bab5077d8f9813734bb6 122 Gene3D G3DSA:3.40.930.10 1 122 4.7E-44 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VEA_002401 a74826386b61bab5077d8f9813734bb6 122 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 2 119 3.3E-43 T 13-10-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 VEA_002401 a74826386b61bab5077d8f9813734bb6 122 SUPERFAMILY SSF55804 4 119 1.31E-34 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VEA_002401 a74826386b61bab5077d8f9813734bb6 122 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 120 1.2E-33 T 13-10-2018 IPR002178 PTS EIIA type-2 domain VEA_002535 7a4b9a1b11f28b8b14e8d775cad26398 460 SUPERFAMILY SSF52540 42 353 6.9E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002535 7a4b9a1b11f28b8b14e8d775cad26398 460 Gene3D G3DSA:1.10.260.30 328 453 8.0E-45 T 13-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 VEA_002535 7a4b9a1b11f28b8b14e8d775cad26398 460 SMART SM00962 100 296 1.4E-114 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VEA_002535 7a4b9a1b11f28b8b14e8d775cad26398 460 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 2.3E-73 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VEA_002535 7a4b9a1b11f28b8b14e8d775cad26398 460 Gene3D G3DSA:3.40.50.300 90 285 3.1E-123 T 13-10-2018 VEA_002535 7a4b9a1b11f28b8b14e8d775cad26398 460 Pfam PF02978 Signal peptide binding domain 329 427 3.7E-33 T 13-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 VEA_002535 7a4b9a1b11f28b8b14e8d775cad26398 460 SMART SM00382 99 247 9.1E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_002535 7a4b9a1b11f28b8b14e8d775cad26398 460 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.251 T 13-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 VEA_002535 7a4b9a1b11f28b8b14e8d775cad26398 460 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VEA_002535 7a4b9a1b11f28b8b14e8d775cad26398 460 SMART SM00963 1 86 6.1E-37 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VEA_002535 7a4b9a1b11f28b8b14e8d775cad26398 460 Gene3D G3DSA:1.20.120.140 4 305 3.1E-123 T 13-10-2018 VEA_002535 7a4b9a1b11f28b8b14e8d775cad26398 460 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 1.4E-179 T 13-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 VEA_002535 7a4b9a1b11f28b8b14e8d775cad26398 460 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.0E-22 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VEA_002535 7a4b9a1b11f28b8b14e8d775cad26398 460 SUPERFAMILY SSF47446 329 430 7.52E-38 T 13-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 VEA_001881 fecce2510df5c02b1495f329c21c97af 275 SUPERFAMILY SSF56655 6 272 3.8E-78 T 13-10-2018 VEA_001881 fecce2510df5c02b1495f329c21c97af 275 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 10 260 1.2E-106 T 13-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 VEA_001881 fecce2510df5c02b1495f329c21c97af 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 65 81 1.1E-5 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VEA_001881 fecce2510df5c02b1495f329c21c97af 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 89 105 1.1E-5 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VEA_001881 fecce2510df5c02b1495f329c21c97af 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 43 63 1.1E-5 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VEA_001881 fecce2510df5c02b1495f329c21c97af 275 Gene3D G3DSA:3.30.540.10 6 160 1.5E-45 T 13-10-2018 VEA_001881 fecce2510df5c02b1495f329c21c97af 275 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 10 262 39.221 T 13-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 VEA_001881 fecce2510df5c02b1495f329c21c97af 275 Gene3D G3DSA:3.40.190.80 161 264 4.0E-26 T 13-10-2018 VEA_001881 fecce2510df5c02b1495f329c21c97af 275 Pfam PF00459 Inositol monophosphatase family 7 253 6.4E-51 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VEA_003661 fdc97dd254a83a081d95e253aba98376 330 Gene3D G3DSA:3.40.50.300 5 327 2.3E-96 T 13-10-2018 VEA_003661 fdc97dd254a83a081d95e253aba98376 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 238 322 6.4E-24 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VEA_003661 fdc97dd254a83a081d95e253aba98376 330 SUPERFAMILY SSF52540 10 258 9.4E-74 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003661 fdc97dd254a83a081d95e253aba98376 330 SMART SM00382 43 236 4.4E-19 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_003661 fdc97dd254a83a081d95e253aba98376 330 Pfam PF00005 ABC transporter 35 186 7.7E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_003661 fdc97dd254a83a081d95e253aba98376 330 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_003661 fdc97dd254a83a081d95e253aba98376 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 1.2E-17 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VEA_000869 949ec1149349e151eae9c3c8ac824a56 204 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 5 197 1.5E-64 T 13-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VEA_000869 949ec1149349e151eae9c3c8ac824a56 204 Pfam PF02581 Thiamine monophosphate synthase 6 186 1.1E-64 T 13-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VEA_000869 949ec1149349e151eae9c3c8ac824a56 204 SUPERFAMILY SSF51391 3 203 6.67E-67 T 13-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VEA_000869 949ec1149349e151eae9c3c8ac824a56 204 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 4 204 27.672 T 13-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VEA_000869 949ec1149349e151eae9c3c8ac824a56 204 Gene3D G3DSA:3.20.20.70 1 204 3.5E-71 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_001311 00a23c77e46570ba3236625a3aef6fba 479 Pfam PF00199 Catalase 7 387 1.9E-191 T 13-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VEA_001311 00a23c77e46570ba3236625a3aef6fba 479 SMART SM01060 7 391 1.2E-289 T 13-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VEA_001311 00a23c77e46570ba3236625a3aef6fba 479 Pfam PF06628 Catalase-related immune-responsive 416 474 4.0E-21 T 13-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VEA_001311 00a23c77e46570ba3236625a3aef6fba 479 PRINTS PR00067 Catalase signature 83 101 1.1E-72 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VEA_001311 00a23c77e46570ba3236625a3aef6fba 479 PRINTS PR00067 Catalase signature 320 346 1.1E-72 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VEA_001311 00a23c77e46570ba3236625a3aef6fba 479 PRINTS PR00067 Catalase signature 104 121 1.1E-72 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VEA_001311 00a23c77e46570ba3236625a3aef6fba 479 PRINTS PR00067 Catalase signature 123 141 1.1E-72 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VEA_001311 00a23c77e46570ba3236625a3aef6fba 479 PRINTS PR00067 Catalase signature 20 43 1.1E-72 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VEA_001311 00a23c77e46570ba3236625a3aef6fba 479 PRINTS PR00067 Catalase signature 288 315 1.1E-72 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VEA_001311 00a23c77e46570ba3236625a3aef6fba 479 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 333 341 - T 13-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VEA_001311 00a23c77e46570ba3236625a3aef6fba 479 Gene3D G3DSA:2.40.180.10 2 479 1.2E-230 T 13-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 VEA_001311 00a23c77e46570ba3236625a3aef6fba 479 SUPERFAMILY SSF56634 3 478 7.07E-216 T 13-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VEA_001311 00a23c77e46570ba3236625a3aef6fba 479 ProSitePatterns PS00438 Catalase proximal active site signature. 43 59 - T 13-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VEA_001311 00a23c77e46570ba3236625a3aef6fba 479 PIRSF PIRSF038928 1 479 4.9E-223 T 13-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VEA_003368 83a10d50190b5b318d496e33ea21ef3f 94 TIGRFAM TIGR02511 type_III_tyeA: type III secretion effector delivery regulator, TyeA family 3 84 2.4E-26 T 13-10-2018 IPR013351 Type III secretion system effector delivery regulator TyeA-related VEA_003368 83a10d50190b5b318d496e33ea21ef3f 94 Pfam PF09059 TyeA 7 86 1.5E-31 T 13-10-2018 IPR015144 Type III secretion system effector delivery regulator TyeA VEA_003368 83a10d50190b5b318d496e33ea21ef3f 94 Gene3D G3DSA:1.20.1280.80 1 92 5.5E-34 T 13-10-2018 IPR038347 TyeA superfamily VEA_003368 83a10d50190b5b318d496e33ea21ef3f 94 SUPERFAMILY SSF140591 3 92 2.24E-30 T 13-10-2018 VEA_003368 83a10d50190b5b318d496e33ea21ef3f 94 ProDom PD029314 TYEA PLASMID ACR1 SECRETION CONTROL TARGETING TYPE LSSA VP1666 TARGET 1 75 1.0E-30 T 13-10-2018 IPR015144 Type III secretion system effector delivery regulator TyeA VEA_001512 11fce3ffafcaa5bcd0b5023a4bd03a6c 516 SMART SM00283 255 516 3.0E-67 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_001512 11fce3ffafcaa5bcd0b5023a4bd03a6c 516 SUPERFAMILY SSF58104 261 515 1.24E-71 T 13-10-2018 VEA_001512 11fce3ffafcaa5bcd0b5023a4bd03a6c 516 Pfam PF08447 PAS fold 26 108 9.7E-19 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 VEA_001512 11fce3ffafcaa5bcd0b5023a4bd03a6c 516 SUPERFAMILY SSF55785 15 108 5.45E-22 T 13-10-2018 IPR035965 PAS domain superfamily VEA_001512 11fce3ffafcaa5bcd0b5023a4bd03a6c 516 Gene3D G3DSA:3.30.450.20 3 110 3.3E-19 T 13-10-2018 VEA_001512 11fce3ffafcaa5bcd0b5023a4bd03a6c 516 Gene3D G3DSA:1.10.287.950 185 516 1.2E-62 T 13-10-2018 VEA_001512 11fce3ffafcaa5bcd0b5023a4bd03a6c 516 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 332 480 5.3E-40 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_001512 11fce3ffafcaa5bcd0b5023a4bd03a6c 516 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 15 105 4.5E-10 T 13-10-2018 IPR000014 PAS domain VEA_000382 8884bab19d9968e0abca84e35b969b75 873 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 240 361 2.3E-18 T 13-10-2018 IPR000014 PAS domain VEA_000382 8884bab19d9968e0abca84e35b969b75 873 SMART SM00091 239 306 1.5E-8 T 13-10-2018 IPR000014 PAS domain VEA_000382 8884bab19d9968e0abca84e35b969b75 873 SUPERFAMILY SSF55785 246 354 1.93E-27 T 13-10-2018 IPR035965 PAS domain superfamily VEA_000382 8884bab19d9968e0abca84e35b969b75 873 SUPERFAMILY SSF47384 357 440 2.55E-20 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEA_000382 8884bab19d9968e0abca84e35b969b75 873 Gene3D G3DSA:3.40.50.2300 730 863 3.2E-37 T 13-10-2018 VEA_000382 8884bab19d9968e0abca84e35b969b75 873 Gene3D G3DSA:1.10.287.130 364 440 1.2E-21 T 13-10-2018 VEA_000382 8884bab19d9968e0abca84e35b969b75 873 Pfam PF00512 His Kinase A (phospho-acceptor) domain 374 439 3.7E-17 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_000382 8884bab19d9968e0abca84e35b969b75 873 Pfam PF00072 Response regulator receiver domain 744 857 5.8E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_000382 8884bab19d9968e0abca84e35b969b75 873 SMART SM00304 170 222 1.6E-5 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_000382 8884bab19d9968e0abca84e35b969b75 873 Pfam PF13426 PAS domain 250 353 6.6E-21 T 13-10-2018 IPR000014 PAS domain VEA_000382 8884bab19d9968e0abca84e35b969b75 873 SMART SM00388 374 439 5.0E-20 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_000382 8884bab19d9968e0abca84e35b969b75 873 SUPERFAMILY SSF55874 428 594 4.45E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_000382 8884bab19d9968e0abca84e35b969b75 873 SMART SM00387 486 597 5.0E-33 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_000382 8884bab19d9968e0abca84e35b969b75 873 Gene3D G3DSA:3.30.565.10 441 600 2.5E-47 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_000382 8884bab19d9968e0abca84e35b969b75 873 SMART SM00086 312 354 1.5E-8 T 13-10-2018 IPR001610 PAC motif VEA_000382 8884bab19d9968e0abca84e35b969b75 873 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 536 5.4E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_000382 8884bab19d9968e0abca84e35b969b75 873 PRINTS PR00344 Bacterial sensor protein C-terminal signature 581 594 5.4E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_000382 8884bab19d9968e0abca84e35b969b75 873 PRINTS PR00344 Bacterial sensor protein C-terminal signature 557 575 5.4E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_000382 8884bab19d9968e0abca84e35b969b75 873 Gene3D G3DSA:3.30.450.20 223 363 1.6E-37 T 13-10-2018 VEA_000382 8884bab19d9968e0abca84e35b969b75 873 SMART SM00448 741 857 4.6E-32 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_000382 8884bab19d9968e0abca84e35b969b75 873 SUPERFAMILY SSF52172 739 860 3.42E-35 T 13-10-2018 IPR011006 CheY-like superfamily VEA_000382 8884bab19d9968e0abca84e35b969b75 873 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 486 596 1.8E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_002034 533ff68ef514e563b0fce2b7dfc11cf6 258 Gene3D G3DSA:3.40.190.10 120 211 4.9E-62 T 13-10-2018 VEA_002034 533ff68ef514e563b0fce2b7dfc11cf6 258 SUPERFAMILY SSF53850 1 256 6.84E-50 T 13-10-2018 VEA_002034 533ff68ef514e563b0fce2b7dfc11cf6 258 SMART SM00062 33 257 2.0E-36 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEA_002034 533ff68ef514e563b0fce2b7dfc11cf6 258 Gene3D G3DSA:3.40.190.10 25 244 4.9E-62 T 13-10-2018 VEA_002034 533ff68ef514e563b0fce2b7dfc11cf6 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 254 2.9E-36 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEA_002034 533ff68ef514e563b0fce2b7dfc11cf6 258 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 57 70 - T 13-10-2018 IPR018313 Solute-binding protein family 3, conserved site VEA_002473 c99e0eb2fabedfb513a3fefb9a68fb9b 358 SUPERFAMILY SSF51569 4 356 1.74E-131 T 13-10-2018 VEA_002473 c99e0eb2fabedfb513a3fefb9a68fb9b 358 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 356 4.3E-110 T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VEA_002473 c99e0eb2fabedfb513a3fefb9a68fb9b 358 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 357 2.9E-179 T 13-10-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 VEA_002473 c99e0eb2fabedfb513a3fefb9a68fb9b 358 PIRSF PIRSF001359 13 358 1.5E-94 T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VEA_002473 c99e0eb2fabedfb513a3fefb9a68fb9b 358 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 354 1.7E-89 T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VEA_002473 c99e0eb2fabedfb513a3fefb9a68fb9b 358 Gene3D G3DSA:3.20.20.70 2 358 1.5E-147 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_002473 c99e0eb2fabedfb513a3fefb9a68fb9b 358 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 100 111 - T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VEA_002473 c99e0eb2fabedfb513a3fefb9a68fb9b 358 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 171 182 - T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VEA_000851 ec1f3e7eb97310ff0f75ad24229aa303 221 Gene3D G3DSA:1.10.10.10 119 221 4.1E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000851 ec1f3e7eb97310ff0f75ad24229aa303 221 Gene3D G3DSA:3.40.50.2300 1 118 4.2E-34 T 13-10-2018 VEA_000851 ec1f3e7eb97310ff0f75ad24229aa303 221 SUPERFAMILY SSF46894 140 215 7.09E-18 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEA_000851 ec1f3e7eb97310ff0f75ad24229aa303 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 142 214 3.7E-18 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEA_000851 ec1f3e7eb97310ff0f75ad24229aa303 221 SMART SM00862 139 215 5.4E-14 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEA_000851 ec1f3e7eb97310ff0f75ad24229aa303 221 SMART SM00448 2 112 1.7E-37 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_000851 ec1f3e7eb97310ff0f75ad24229aa303 221 SUPERFAMILY SSF52172 2 129 1.85E-38 T 13-10-2018 IPR011006 CheY-like superfamily VEA_000851 ec1f3e7eb97310ff0f75ad24229aa303 221 Pfam PF00072 Response regulator receiver domain 4 112 2.1E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_001578 f3ed6c4745b837002021f37af39977a3 205 PRINTS PR01021 OMPA domain signature 129 145 9.4E-9 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEA_001578 f3ed6c4745b837002021f37af39977a3 205 PRINTS PR01021 OMPA domain signature 114 129 9.4E-9 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEA_001578 f3ed6c4745b837002021f37af39977a3 205 PRINTS PR01021 OMPA domain signature 84 106 9.4E-9 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEA_001578 f3ed6c4745b837002021f37af39977a3 205 Gene3D G3DSA:3.30.1330.60 50 190 4.1E-29 T 13-10-2018 IPR036737 OmpA-like domain superfamily VEA_001578 f3ed6c4745b837002021f37af39977a3 205 ProSitePatterns PS00018 EF-hand calcium-binding domain. 41 53 - T 13-10-2018 IPR018247 EF-Hand 1, calcium-binding site VEA_001578 f3ed6c4745b837002021f37af39977a3 205 SUPERFAMILY SSF103088 54 183 5.89E-30 T 13-10-2018 IPR036737 OmpA-like domain superfamily VEA_001578 f3ed6c4745b837002021f37af39977a3 205 Pfam PF00691 OmpA family 83 178 5.0E-18 T 13-10-2018 IPR006665 OmpA-like domain VEA_000978 d1b127511118f0b7da7275c85dfb5764 422 Pfam PF02687 FtsX-like permease family 315 411 5.7E-10 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VEA_000978 d1b127511118f0b7da7275c85dfb5764 422 Pfam PF12704 MacB-like periplasmic core domain 23 248 7.0E-16 T 13-10-2018 IPR025857 MacB-like periplasmic core domain VEA_002276 1e4e74a0a38a4d0d5251b64f342c45e0 339 Gene3D G3DSA:3.40.630.30 1 274 7.8E-113 T 13-10-2018 VEA_002276 1e4e74a0a38a4d0d5251b64f342c45e0 339 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 338 2.9E-132 T 13-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 VEA_002276 1e4e74a0a38a4d0d5251b64f342c45e0 339 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 337 3.4E-137 T 13-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 VEA_002276 1e4e74a0a38a4d0d5251b64f342c45e0 339 SUPERFAMILY SSF55729 1 338 1.97E-128 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_002276 1e4e74a0a38a4d0d5251b64f342c45e0 339 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 338 1.6E-133 T 13-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 VEA_002276 1e4e74a0a38a4d0d5251b64f342c45e0 339 Gene3D G3DSA:2.40.40.20 277 339 3.7E-5 T 13-10-2018 VEA_003321 807b4e2d3a2c708a3d0ec43cb4bef409 711 SUPERFAMILY SSF56935 26 711 6.11E-133 T 13-10-2018 VEA_003321 807b4e2d3a2c708a3d0ec43cb4bef409 711 Gene3D G3DSA:2.40.170.20 168 711 4.5E-134 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VEA_003321 807b4e2d3a2c708a3d0ec43cb4bef409 711 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 56 711 5.6E-124 T 13-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 VEA_003321 807b4e2d3a2c708a3d0ec43cb4bef409 711 Gene3D G3DSA:2.170.130.10 32 167 1.3E-31 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VEA_003321 807b4e2d3a2c708a3d0ec43cb4bef409 711 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 156 3.3E-17 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain VEA_003321 807b4e2d3a2c708a3d0ec43cb4bef409 711 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 41 - T 13-10-2018 IPR010916 TonB box, conserved site VEA_003321 807b4e2d3a2c708a3d0ec43cb4bef409 711 Pfam PF00593 TonB dependent receptor 229 710 1.3E-53 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VEA_003520 b5c6f72e8573d78a80c654a329a0f996 344 SUPERFAMILY SSF52172 20 136 1.12E-28 T 13-10-2018 IPR011006 CheY-like superfamily VEA_003520 b5c6f72e8573d78a80c654a329a0f996 344 Pfam PF00072 Response regulator receiver domain 23 130 5.7E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_003520 b5c6f72e8573d78a80c654a329a0f996 344 Gene3D G3DSA:3.40.1550.10 161 342 1.6E-21 T 13-10-2018 IPR028976 CheC-like superfamily VEA_003520 b5c6f72e8573d78a80c654a329a0f996 344 Gene3D G3DSA:3.40.50.2300 15 139 4.3E-29 T 13-10-2018 VEA_003520 b5c6f72e8573d78a80c654a329a0f996 344 SUPERFAMILY SSF103039 163 342 2.49E-29 T 13-10-2018 IPR028976 CheC-like superfamily VEA_003520 b5c6f72e8573d78a80c654a329a0f996 344 SMART SM00448 21 133 1.5E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_004008 0781dffb44f7b18d62a3ef831c5b2082 139 Gene3D G3DSA:3.10.580.10 1 128 1.7E-30 T 13-10-2018 VEA_004008 0781dffb44f7b18d62a3ef831c5b2082 139 SUPERFAMILY SSF54631 1 127 2.15E-31 T 13-10-2018 VEA_004008 0781dffb44f7b18d62a3ef831c5b2082 139 SMART SM00116 13 61 0.049 T 13-10-2018 IPR000644 CBS domain VEA_004008 0781dffb44f7b18d62a3ef831c5b2082 139 SMART SM00116 80 128 4.1E-10 T 13-10-2018 IPR000644 CBS domain VEA_004008 0781dffb44f7b18d62a3ef831c5b2082 139 Pfam PF00571 CBS domain 73 127 8.8E-13 T 13-10-2018 IPR000644 CBS domain VEA_004008 0781dffb44f7b18d62a3ef831c5b2082 139 Pfam PF00571 CBS domain 6 61 1.9E-7 T 13-10-2018 IPR000644 CBS domain VEA_003270 4d698f2a97554618fb333a009fe70ede 416 Gene3D G3DSA:3.30.1330.60 276 414 2.1E-14 T 13-10-2018 IPR036737 OmpA-like domain superfamily VEA_003270 4d698f2a97554618fb333a009fe70ede 416 SUPERFAMILY SSF103088 281 409 8.76E-13 T 13-10-2018 IPR036737 OmpA-like domain superfamily VEA_001500 d8be6dee9bdaaf02f2fd32d8df6b9138 748 ProSitePatterns PS01175 Ribonuclease II family signature. 561 585 - T 13-10-2018 IPR022966 Ribonuclease II/R, conserved site VEA_001500 d8be6dee9bdaaf02f2fd32d8df6b9138 748 Gene3D G3DSA:2.40.50.140 657 745 7.1E-15 T 13-10-2018 VEA_001500 d8be6dee9bdaaf02f2fd32d8df6b9138 748 Gene3D G3DSA:2.40.50.140 75 149 1.2E-13 T 13-10-2018 VEA_001500 d8be6dee9bdaaf02f2fd32d8df6b9138 748 SMART SM00316 660 741 1.2E-10 T 13-10-2018 IPR022967 RNA-binding domain, S1 VEA_001500 d8be6dee9bdaaf02f2fd32d8df6b9138 748 Hamap MF_01895 Ribonuclease R [rnr]. 39 741 50.36 T 13-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 VEA_001500 d8be6dee9bdaaf02f2fd32d8df6b9138 748 SUPERFAMILY SSF50249 143 236 7.37E-9 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_001500 d8be6dee9bdaaf02f2fd32d8df6b9138 748 SUPERFAMILY SSF50249 222 658 7.42E-137 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_001500 d8be6dee9bdaaf02f2fd32d8df6b9138 748 TIGRFAM TIGR02063 RNase_R: ribonuclease R 20 740 7.7E-231 T 13-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 VEA_001500 d8be6dee9bdaaf02f2fd32d8df6b9138 748 SMART SM00357 87 146 0.0051 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 VEA_001500 d8be6dee9bdaaf02f2fd32d8df6b9138 748 SMART SM00955 261 594 3.7E-174 T 13-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 VEA_001500 d8be6dee9bdaaf02f2fd32d8df6b9138 748 Pfam PF00575 S1 RNA binding domain 658 740 1.2E-12 T 13-10-2018 IPR003029 S1 domain GO:0003676 VEA_001500 d8be6dee9bdaaf02f2fd32d8df6b9138 748 Pfam PF00773 RNB domain 261 593 2.4E-109 T 13-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 VEA_001500 d8be6dee9bdaaf02f2fd32d8df6b9138 748 SUPERFAMILY SSF50249 662 738 1.04E-15 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_001500 d8be6dee9bdaaf02f2fd32d8df6b9138 748 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 68 740 5.5E-199 T 13-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 VEA_001500 d8be6dee9bdaaf02f2fd32d8df6b9138 748 SUPERFAMILY SSF50249 68 148 3.27E-13 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_001500 d8be6dee9bdaaf02f2fd32d8df6b9138 748 Pfam PF08206 Ribonuclease B OB domain 88 145 6.7E-15 T 13-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain VEA_004166 3e034ba46b94f47d84de4b11e5c852cc 278 PRINTS PR01010 Flagellar P-ring protein signature 165 177 1.2E-45 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VEA_004166 3e034ba46b94f47d84de4b11e5c852cc 278 PRINTS PR01010 Flagellar P-ring protein signature 75 93 1.2E-45 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VEA_004166 3e034ba46b94f47d84de4b11e5c852cc 278 PRINTS PR01010 Flagellar P-ring protein signature 34 52 1.2E-45 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VEA_004166 3e034ba46b94f47d84de4b11e5c852cc 278 PRINTS PR01010 Flagellar P-ring protein signature 17 34 1.2E-45 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VEA_004166 3e034ba46b94f47d84de4b11e5c852cc 278 PRINTS PR01010 Flagellar P-ring protein signature 101 119 1.2E-45 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VEA_004166 3e034ba46b94f47d84de4b11e5c852cc 278 Hamap MF_00416 Flagellar P-ring protein [flgI]. 1 278 24.824 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VEA_004166 3e034ba46b94f47d84de4b11e5c852cc 278 Pfam PF02119 Flagellar P-ring protein 1 277 5.1E-109 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VEA_003530 819aa2640f4360eb220f1f26a50b1c0b 700 Gene3D G3DSA:3.10.560.10 102 182 2.7E-15 T 13-10-2018 VEA_003530 819aa2640f4360eb220f1f26a50b1c0b 700 Pfam PF10531 SLBB domain 495 538 2.0E-4 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEA_003530 819aa2640f4360eb220f1f26a50b1c0b 700 Pfam PF10531 SLBB domain 212 253 1.6E-7 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEA_003530 819aa2640f4360eb220f1f26a50b1c0b 700 Pfam PF10531 SLBB domain 590 633 1.2E-10 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEA_003530 819aa2640f4360eb220f1f26a50b1c0b 700 Pfam PF10531 SLBB domain 105 151 1.6E-4 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEA_003530 819aa2640f4360eb220f1f26a50b1c0b 700 Pfam PF10531 SLBB domain 396 447 6.8E-8 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEA_003530 819aa2640f4360eb220f1f26a50b1c0b 700 Pfam PF10531 SLBB domain 299 352 2.3E-11 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEA_003530 819aa2640f4360eb220f1f26a50b1c0b 700 Pfam PF02563 Polysaccharide biosynthesis/export protein 24 91 1.7E-10 T 13-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 VEA_003530 819aa2640f4360eb220f1f26a50b1c0b 700 Gene3D G3DSA:3.10.560.10 578 671 9.7E-19 T 13-10-2018 VEA_003530 819aa2640f4360eb220f1f26a50b1c0b 700 Gene3D G3DSA:3.10.560.10 289 378 1.5E-15 T 13-10-2018 VEA_003530 819aa2640f4360eb220f1f26a50b1c0b 700 Gene3D G3DSA:3.10.560.10 388 473 4.1E-14 T 13-10-2018 VEA_003530 819aa2640f4360eb220f1f26a50b1c0b 700 Gene3D G3DSA:3.10.560.10 482 577 1.2E-16 T 13-10-2018 VEA_003530 819aa2640f4360eb220f1f26a50b1c0b 700 Gene3D G3DSA:3.10.560.10 200 288 2.0E-17 T 13-10-2018 VEA_003530 819aa2640f4360eb220f1f26a50b1c0b 700 Gene3D G3DSA:3.30.1950.10 45 101 2.7E-15 T 13-10-2018 VEA_003925 e31c36fb26232b365688875946940532 248 Pfam PF01709 Transcriptional regulator 5 236 7.0E-96 T 13-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_003925 e31c36fb26232b365688875946940532 248 SUPERFAMILY SSF75625 3 245 1.83E-96 T 13-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_003925 e31c36fb26232b365688875946940532 248 Gene3D G3DSA:3.30.70.980 85 236 1.4E-58 T 13-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_003925 e31c36fb26232b365688875946940532 248 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 4.4E-104 T 13-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_003925 e31c36fb26232b365688875946940532 248 Gene3D G3DSA:3.30.70.980 130 205 1.4E-58 T 13-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_003925 e31c36fb26232b365688875946940532 248 Gene3D G3DSA:1.10.10.200 1 81 3.0E-35 T 13-10-2018 IPR017856 Integrase-like, N-terminal VEA_003925 e31c36fb26232b365688875946940532 248 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 37.141 T 13-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_003169 01236bcf0dd82080b0d4d44430253fd8 320 SUPERFAMILY SSF56349 99 315 2.85E-48 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VEA_003169 01236bcf0dd82080b0d4d44430253fd8 320 Gene3D G3DSA:1.10.443.10 97 310 4.6E-69 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VEA_003169 01236bcf0dd82080b0d4d44430253fd8 320 Pfam PF00589 Phage integrase family 105 305 2.3E-43 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VEA_003169 01236bcf0dd82080b0d4d44430253fd8 320 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 6 87 4.1E-22 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VEA_003169 01236bcf0dd82080b0d4d44430253fd8 320 Gene3D G3DSA:1.10.150.130 1 94 3.3E-27 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal VEA_003169 01236bcf0dd82080b0d4d44430253fd8 320 TIGRFAM TIGR02249 integrase_gron: integron integrase 5 320 3.8E-152 T 13-10-2018 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 VEA_003314 5d77eeed1989ee08e71bec238cf7552c 354 Gene3D G3DSA:2.40.50.100 46 78 3.4E-21 T 13-10-2018 VEA_003314 5d77eeed1989ee08e71bec238cf7552c 354 Gene3D G3DSA:2.40.30.170 216 335 3.5E-25 T 13-10-2018 VEA_003314 5d77eeed1989ee08e71bec238cf7552c 354 SUPERFAMILY SSF111369 181 273 4.45E-7 T 13-10-2018 VEA_003314 5d77eeed1989ee08e71bec238cf7552c 354 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 45 274 1.9E-19 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VEA_003314 5d77eeed1989ee08e71bec238cf7552c 354 SUPERFAMILY SSF111369 45 112 8.76E-11 T 13-10-2018 VEA_003314 5d77eeed1989ee08e71bec238cf7552c 354 Gene3D G3DSA:1.10.287.470 79 173 3.4E-21 T 13-10-2018 VEA_003191 608b590e05003ad4f3ac08ea67a42bd2 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 3.4E-13 T 13-10-2018 IPR021681 Protein of unknown function DUF3265 VEA_000416 7b4f7278ab506b8b3c00da34c250a160 498 Pfam PF00361 Proton-conducting membrane transporter 129 413 1.2E-58 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEA_000416 7b4f7278ab506b8b3c00da34c250a160 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 133 152 1.2E-13 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEA_000416 7b4f7278ab506b8b3c00da34c250a160 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 322 341 1.2E-13 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEA_000416 7b4f7278ab506b8b3c00da34c250a160 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 163 187 1.2E-13 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEA_000416 7b4f7278ab506b8b3c00da34c250a160 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 234 258 1.2E-13 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEA_000416 7b4f7278ab506b8b3c00da34c250a160 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 374 400 1.2E-13 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEA_002313 5b70fe31904ed4874fe196f7effd0428 263 PIRSF PIRSF000728 1 263 2.0E-70 T 13-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VEA_002313 5b70fe31904ed4874fe196f7effd0428 263 Hamap MF_00082 Acetylglutamate kinase [argB]. 6 255 42.465 T 13-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VEA_002313 5b70fe31904ed4874fe196f7effd0428 263 Pfam PF00696 Amino acid kinase family 9 238 6.6E-36 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VEA_002313 5b70fe31904ed4874fe196f7effd0428 263 Gene3D G3DSA:3.40.1160.10 4 260 5.1E-64 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VEA_002313 5b70fe31904ed4874fe196f7effd0428 263 TIGRFAM TIGR00761 argB: acetylglutamate kinase 9 234 4.8E-63 T 13-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VEA_002313 5b70fe31904ed4874fe196f7effd0428 263 SUPERFAMILY SSF53633 5 262 2.71E-58 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VEA_003673 c4d197c17b565967d2ff785559612f49 301 Gene3D G3DSA:3.10.310.10 1 299 2.7E-100 T 13-10-2018 VEA_003673 c4d197c17b565967d2ff785559612f49 301 Pfam PF05544 Proline racemase 1 298 8.9E-116 T 13-10-2018 IPR008794 Proline racemase family VEA_003673 c4d197c17b565967d2ff785559612f49 301 Gene3D G3DSA:3.10.310.10 112 277 2.7E-100 T 13-10-2018 VEA_003673 c4d197c17b565967d2ff785559612f49 301 PIRSF PIRSF029792 1 301 2.9E-124 T 13-10-2018 IPR008794 Proline racemase family VEA_003673 c4d197c17b565967d2ff785559612f49 301 SUPERFAMILY SSF54506 1 298 4.26E-105 T 13-10-2018 VEA_002666 fab9063fde32dc283b347f55156a1d10 462 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 18 442 7.1E-107 T 13-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 VEA_002666 fab9063fde32dc283b347f55156a1d10 462 Gene3D G3DSA:1.20.1250.20 221 430 1.8E-10 T 13-10-2018 VEA_002666 fab9063fde32dc283b347f55156a1d10 462 SUPERFAMILY SSF103473 10 425 6.19E-27 T 13-10-2018 IPR036259 MFS transporter superfamily VEA_002666 fab9063fde32dc283b347f55156a1d10 462 Gene3D G3DSA:1.20.1250.20 7 209 3.1E-9 T 13-10-2018 VEA_002666 fab9063fde32dc283b347f55156a1d10 462 Pfam PF13347 MFS/sugar transport protein 20 430 1.4E-79 T 13-10-2018 VEA_000579 efe559a9fbc65b568fb7c01fee08313a 237 Gene3D G3DSA:3.40.50.2300 2 122 9.8E-33 T 13-10-2018 VEA_000579 efe559a9fbc65b568fb7c01fee08313a 237 SUPERFAMILY SSF46894 136 232 7.09E-24 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEA_000579 efe559a9fbc65b568fb7c01fee08313a 237 SUPERFAMILY SSF52172 8 129 9.96E-37 T 13-10-2018 IPR011006 CheY-like superfamily VEA_000579 efe559a9fbc65b568fb7c01fee08313a 237 Pfam PF00072 Response regulator receiver domain 11 119 4.6E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_000579 efe559a9fbc65b568fb7c01fee08313a 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 230 6.7E-20 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEA_000579 efe559a9fbc65b568fb7c01fee08313a 237 Gene3D G3DSA:1.10.10.10 123 237 1.4E-31 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000579 efe559a9fbc65b568fb7c01fee08313a 237 SMART SM00448 8 118 4.6E-37 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_000579 efe559a9fbc65b568fb7c01fee08313a 237 SMART SM00862 154 230 6.9E-18 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEA_004260 d06de0d431f0c634cb3b28ea651c1707 321 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 320 5.2E-103 T 13-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 VEA_004260 d06de0d431f0c634cb3b28ea651c1707 321 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 2 320 26.85 T 13-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 VEA_004260 d06de0d431f0c634cb3b28ea651c1707 321 Gene3D G3DSA:3.30.1330.10 1 143 5.8E-41 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VEA_004260 d06de0d431f0c634cb3b28ea651c1707 321 SUPERFAMILY SSF55326 3 137 1.1E-32 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VEA_004260 d06de0d431f0c634cb3b28ea651c1707 321 Gene3D G3DSA:3.90.650.10 144 320 3.2E-49 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VEA_004260 d06de0d431f0c634cb3b28ea651c1707 321 Pfam PF00586 AIR synthase related protein, N-terminal domain 28 137 2.9E-20 T 13-10-2018 IPR016188 PurM-like, N-terminal domain VEA_004260 d06de0d431f0c634cb3b28ea651c1707 321 PIRSF PIRSF005303 1 320 7.1E-81 T 13-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 VEA_004260 d06de0d431f0c634cb3b28ea651c1707 321 Pfam PF02769 AIR synthase related protein, C-terminal domain 149 301 6.1E-10 T 13-10-2018 IPR010918 PurM-like, C-terminal domain VEA_004260 d06de0d431f0c634cb3b28ea651c1707 321 SUPERFAMILY SSF56042 141 307 5.38E-35 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VEA_003156 7a5c81bbfe0766740f9e49a73ec448b4 417 Pfam PF03222 Tryptophan/tyrosine permease family 29 381 1.0E-17 T 13-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 VEA_002327 9beb8d379eccb7eb1887553e254a26b3 143 Gene3D G3DSA:3.40.50.300 1 143 6.3E-42 T 13-10-2018 VEA_002327 9beb8d379eccb7eb1887553e254a26b3 143 Pfam PF01202 Shikimate kinase 1 140 4.3E-46 T 13-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 VEA_002327 9beb8d379eccb7eb1887553e254a26b3 143 SUPERFAMILY SSF52540 2 140 6.29E-19 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002327 9beb8d379eccb7eb1887553e254a26b3 143 ProSitePatterns PS01128 Shikimate kinase signature. 31 56 - T 13-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 VEA_002327 9beb8d379eccb7eb1887553e254a26b3 143 Hamap MF_00109 Shikimate kinase [aroK]. 1 141 18.066 T 13-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 VEA_002327 9beb8d379eccb7eb1887553e254a26b3 143 PRINTS PR01100 Shikimate kinase family signature 2 15 4.0E-18 T 13-10-2018 VEA_002327 9beb8d379eccb7eb1887553e254a26b3 143 PRINTS PR01100 Shikimate kinase family signature 69 86 4.0E-18 T 13-10-2018 VEA_002327 9beb8d379eccb7eb1887553e254a26b3 143 PRINTS PR01100 Shikimate kinase family signature 48 57 4.0E-18 T 13-10-2018 VEA_002327 9beb8d379eccb7eb1887553e254a26b3 143 PRINTS PR01100 Shikimate kinase family signature 30 38 4.0E-18 T 13-10-2018 VEA_004023 1585b5e78a217d098b775583ccb37a20 290 SUPERFAMILY SSF54427 169 289 1.53E-15 T 13-10-2018 IPR032710 NTF2-like domain superfamily VEA_004023 1585b5e78a217d098b775583ccb37a20 290 Gene3D G3DSA:3.10.450.240 166 290 5.0E-6 T 13-10-2018 VEA_004023 1585b5e78a217d098b775583ccb37a20 290 Pfam PF04280 Tim44-like domain 168 289 2.4E-14 T 13-10-2018 IPR007379 Tim44-like domain VEA_004023 1585b5e78a217d098b775583ccb37a20 290 SMART SM00978 159 290 2.3E-36 T 13-10-2018 IPR007379 Tim44-like domain VEA_001257 5bf4d76c5d23ff9b3c845cec0f91b504 712 Gene3D G3DSA:2.40.170.20 166 712 3.9E-84 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VEA_001257 5bf4d76c5d23ff9b3c845cec0f91b504 712 Pfam PF00593 TonB dependent receptor 233 710 1.8E-52 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VEA_001257 5bf4d76c5d23ff9b3c845cec0f91b504 712 SUPERFAMILY SSF56935 21 712 1.08E-114 T 13-10-2018 VEA_001257 5bf4d76c5d23ff9b3c845cec0f91b504 712 Gene3D G3DSA:2.170.130.10 28 155 6.8E-30 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VEA_001257 5bf4d76c5d23ff9b3c845cec0f91b504 712 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 28 712 1.3E-127 T 13-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 VEA_001257 5bf4d76c5d23ff9b3c845cec0f91b504 712 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 30 712 3.2E-118 T 13-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 VEA_001257 5bf4d76c5d23ff9b3c845cec0f91b504 712 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 151 4.2E-25 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain VEA_004524 d5dd17ad987b691407a0769b85362bbc 947 Gene3D G3DSA:1.20.120.1510 451 564 2.7E-32 T 13-10-2018 VEA_004524 d5dd17ad987b691407a0769b85362bbc 947 Gene3D G3DSA:1.20.120.330 288 443 1.4E-54 T 13-10-2018 VEA_004524 d5dd17ad987b691407a0769b85362bbc 947 Gene3D G3DSA:3.30.460.100 565 814 5.4E-92 T 13-10-2018 VEA_004524 d5dd17ad987b691407a0769b85362bbc 947 SUPERFAMILY SSF81593 290 439 4.79E-42 T 13-10-2018 VEA_004524 d5dd17ad987b691407a0769b85362bbc 947 Gene3D G3DSA:1.10.4050.10 2 112 1.7E-12 T 13-10-2018 VEA_004524 d5dd17ad987b691407a0769b85362bbc 947 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 30 944 19.124 T 13-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 VEA_004524 d5dd17ad987b691407a0769b85362bbc 947 Pfam PF08335 GlnD PII-uridylyltransferase 846 913 4.2E-6 T 13-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 VEA_004524 d5dd17ad987b691407a0769b85362bbc 947 Pfam PF08335 GlnD PII-uridylyltransferase 300 439 1.9E-44 T 13-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 VEA_004524 d5dd17ad987b691407a0769b85362bbc 947 Gene3D G3DSA:1.20.120.330 815 947 2.9E-41 T 13-10-2018 VEA_004524 d5dd17ad987b691407a0769b85362bbc 947 SUPERFAMILY SSF81301 24 289 7.77E-87 T 13-10-2018 VEA_004524 d5dd17ad987b691407a0769b85362bbc 947 SUPERFAMILY SSF81301 528 815 9.15E-88 T 13-10-2018 VEA_004524 d5dd17ad987b691407a0769b85362bbc 947 SUPERFAMILY SSF81593 818 946 2.12E-32 T 13-10-2018 VEA_004524 d5dd17ad987b691407a0769b85362bbc 947 Gene3D G3DSA:3.30.460.10 115 287 1.6E-65 T 13-10-2018 VEA_004524 d5dd17ad987b691407a0769b85362bbc 947 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 33 279 1.1E-92 T 13-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 VEA_004524 d5dd17ad987b691407a0769b85362bbc 947 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 556 807 3.0E-97 T 13-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 VEA_004234 e466941f638b8db1cf756cbadfd845db 561 Gene3D G3DSA:3.20.20.80 176 480 1.7E-115 T 13-10-2018 VEA_004234 e466941f638b8db1cf756cbadfd845db 561 Gene3D G3DSA:2.60.40.1180 481 559 1.7E-18 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta VEA_004234 e466941f638b8db1cf756cbadfd845db 561 SUPERFAMILY SSF51011 480 559 9.0E-16 T 13-10-2018 VEA_004234 e466941f638b8db1cf756cbadfd845db 561 SUPERFAMILY SSF51445 9 476 6.61E-164 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VEA_004234 e466941f638b8db1cf756cbadfd845db 561 SMART SM00642 18 419 1.6E-165 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VEA_004234 e466941f638b8db1cf756cbadfd845db 561 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 10 557 1.0E-267 T 13-10-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 VEA_004234 e466941f638b8db1cf756cbadfd845db 561 Pfam PF16657 Maltogenic Amylase, C-terminal domain 481 555 1.9E-8 T 13-10-2018 IPR032091 Maltogenic Amylase, C-terminal VEA_004234 e466941f638b8db1cf756cbadfd845db 561 Gene3D G3DSA:3.20.20.80 1 113 3.3E-51 T 13-10-2018 VEA_004234 e466941f638b8db1cf756cbadfd845db 561 Gene3D G3DSA:3.90.400.10 114 175 1.8E-30 T 13-10-2018 VEA_004234 e466941f638b8db1cf756cbadfd845db 561 Pfam PF00128 Alpha amylase, catalytic domain 33 376 7.3E-129 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VEA_004308 e05ca041bc11cfbaa19afa03dfcc8855 366 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 14 99 6.5E-6 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VEA_004308 e05ca041bc11cfbaa19afa03dfcc8855 366 SUPERFAMILY SSF56349 15 333 3.83E-23 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VEA_004308 e05ca041bc11cfbaa19afa03dfcc8855 366 Gene3D G3DSA:1.10.443.10 124 330 1.4E-13 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VEA_004308 e05ca041bc11cfbaa19afa03dfcc8855 366 Pfam PF00589 Phage integrase family 136 316 2.1E-8 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VEA_004308 e05ca041bc11cfbaa19afa03dfcc8855 366 Gene3D G3DSA:1.10.150.130 8 105 1.4E-6 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal VEA_002497 a11da14c415e2ba6de375d1e11135d6f 225 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 8 222 2.2E-74 T 13-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 VEA_002497 a11da14c415e2ba6de375d1e11135d6f 225 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 30.065 T 13-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 VEA_002497 a11da14c415e2ba6de375d1e11135d6f 225 SUPERFAMILY SSF69065 5 158 9.94E-50 T 13-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 VEA_002497 a11da14c415e2ba6de375d1e11135d6f 225 SMART SM00535 20 148 6.0E-55 T 13-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 VEA_002497 a11da14c415e2ba6de375d1e11135d6f 225 SUPERFAMILY SSF54768 108 222 4.71E-29 T 13-10-2018 VEA_002497 a11da14c415e2ba6de375d1e11135d6f 225 Gene3D G3DSA:3.30.160.20 153 224 3.7E-20 T 13-10-2018 VEA_002497 a11da14c415e2ba6de375d1e11135d6f 225 Gene3D G3DSA:1.10.1520.10 4 146 5.5E-44 T 13-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 VEA_002497 a11da14c415e2ba6de375d1e11135d6f 225 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 13-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 VEA_002497 a11da14c415e2ba6de375d1e11135d6f 225 SMART SM00358 155 223 1.4E-22 T 13-10-2018 IPR014720 Double-stranded RNA-binding domain VEA_002497 a11da14c415e2ba6de375d1e11135d6f 225 Pfam PF00035 Double-stranded RNA binding motif 155 222 5.8E-16 T 13-10-2018 IPR014720 Double-stranded RNA-binding domain VEA_002497 a11da14c415e2ba6de375d1e11135d6f 225 Pfam PF14622 Ribonuclease-III-like 20 140 7.5E-33 T 13-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 VEA_002162 eb133fc877f0478533b2cdeed3611ec6 276 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 4 261 4.5E-74 T 13-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VEA_002162 eb133fc877f0478533b2cdeed3611ec6 276 Pfam PF01565 FAD binding domain 5 73 7.3E-10 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 VEA_002162 eb133fc877f0478533b2cdeed3611ec6 276 SUPERFAMILY SSF56176 6 126 3.84E-27 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VEA_002162 eb133fc877f0478533b2cdeed3611ec6 276 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 276 65.037 T 13-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VEA_002162 eb133fc877f0478533b2cdeed3611ec6 276 SUPERFAMILY SSF56194 136 270 6.93E-46 T 13-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VEA_002162 eb133fc877f0478533b2cdeed3611ec6 276 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 139 260 4.5E-31 T 13-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VEA_002162 eb133fc877f0478533b2cdeed3611ec6 276 Gene3D G3DSA:3.30.465.10 2 151 3.1E-52 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 VEA_002162 eb133fc877f0478533b2cdeed3611ec6 276 Gene3D G3DSA:3.90.78.10 152 275 4.8E-41 T 13-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VEA_002565 4685b967c28dcb1e81fd981c03a134a4 148 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 25 147 29.642 T 13-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 VEA_002565 4685b967c28dcb1e81fd981c03a134a4 148 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 29 137 6.6E-51 T 13-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 VEA_002565 4685b967c28dcb1e81fd981c03a134a4 148 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 108 140 4.4E-10 T 13-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 VEA_002565 4685b967c28dcb1e81fd981c03a134a4 148 SUPERFAMILY SSF109635 8 107 9.42E-37 T 13-10-2018 IPR037187 DksA, N-terminal domain superfamily VEA_002565 4685b967c28dcb1e81fd981c03a134a4 148 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 111 135 - T 13-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site VEA_002565 4685b967c28dcb1e81fd981c03a134a4 148 SUPERFAMILY SSF57716 108 146 6.41E-10 T 13-10-2018 VEA_002565 4685b967c28dcb1e81fd981c03a134a4 148 Gene3D G3DSA:1.20.120.910 17 147 3.4E-36 T 13-10-2018 VEA_002565 4685b967c28dcb1e81fd981c03a134a4 148 PRINTS PR00618 DksA/TraR zinc finger signature 111 122 8.9E-5 T 13-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria VEA_002565 4685b967c28dcb1e81fd981c03a134a4 148 PRINTS PR00618 DksA/TraR zinc finger signature 123 135 8.9E-5 T 13-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria VEA_003927 2521fae558f8aee96851e95ec6d7b5b9 277 Gene3D G3DSA:3.20.20.410 1 259 9.7E-45 T 13-10-2018 IPR036520 UPF0759 superfamily VEA_003927 2521fae558f8aee96851e95ec6d7b5b9 277 Pfam PF01904 Protein of unknown function DUF72 12 250 3.8E-58 T 13-10-2018 IPR002763 Protein of unknown function DUF72 VEA_003927 2521fae558f8aee96851e95ec6d7b5b9 277 SUPERFAMILY SSF117396 1 253 2.35E-71 T 13-10-2018 IPR036520 UPF0759 superfamily VEA_004323 4a4fa309576e96024debc0efe026ef18 422 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 196 210 - T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VEA_004323 4a4fa309576e96024debc0efe026ef18 422 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 3 420 1.3E-199 T 13-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 VEA_004323 4a4fa309576e96024debc0efe026ef18 422 SUPERFAMILY SSF53383 1 421 2.93E-126 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_004323 4a4fa309576e96024debc0efe026ef18 422 PIRSF PIRSF001434 1 422 3.9E-128 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VEA_004323 4a4fa309576e96024debc0efe026ef18 422 Gene3D G3DSA:3.90.1150.10 289 422 2.9E-51 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEA_004323 4a4fa309576e96024debc0efe026ef18 422 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 420 2.7E-142 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VEA_004323 4a4fa309576e96024debc0efe026ef18 422 Gene3D G3DSA:3.40.640.10 1 285 7.2E-101 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_003034 263e5cac6d839682b17f85bc8b542f32 255 Pfam PF13247 4Fe-4S dicluster domain 102 196 1.0E-29 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEA_003034 263e5cac6d839682b17f85bc8b542f32 255 Gene3D G3DSA:3.30.70.20 40 247 4.9E-67 T 13-10-2018 VEA_003034 263e5cac6d839682b17f85bc8b542f32 255 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 141 152 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VEA_003034 263e5cac6d839682b17f85bc8b542f32 255 SUPERFAMILY SSF54862 47 231 4.29E-66 T 13-10-2018 VEA_002860 3ffc5c6e9fe2e59d9fd2250262a82fe0 154 SMART SM00855 2 116 7.8E-8 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 VEA_002860 3ffc5c6e9fe2e59d9fd2250262a82fe0 154 SUPERFAMILY SSF53254 1 143 2.75E-22 T 13-10-2018 IPR029033 Histidine phosphatase superfamily VEA_002860 3ffc5c6e9fe2e59d9fd2250262a82fe0 154 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 77 7.7E-10 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 VEA_002860 3ffc5c6e9fe2e59d9fd2250262a82fe0 154 PIRSF PIRSF000709 91 145 57.0 T 13-10-2018 VEA_002860 3ffc5c6e9fe2e59d9fd2250262a82fe0 154 PIRSF PIRSF000709 1 87 0.0028 T 13-10-2018 VEA_002860 3ffc5c6e9fe2e59d9fd2250262a82fe0 154 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 154 2.4E-37 T 13-10-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0101006 VEA_002860 3ffc5c6e9fe2e59d9fd2250262a82fe0 154 Gene3D G3DSA:3.40.50.1240 1 154 3.1E-36 T 13-10-2018 IPR029033 Histidine phosphatase superfamily VEA_003048 de5c2adaad42cebabdce421abb97d455 400 Pfam PF02687 FtsX-like permease family 301 392 2.4E-13 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VEA_003048 de5c2adaad42cebabdce421abb97d455 400 Pfam PF12704 MacB-like periplasmic core domain 15 232 4.2E-23 T 13-10-2018 IPR025857 MacB-like periplasmic core domain VEA_003836 ebf114e2b3565ae02023321097a3f492 192 PIRSF PIRSF035805 1 192 5.8E-57 T 13-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 VEA_003836 ebf114e2b3565ae02023321097a3f492 192 Pfam PF00265 Thymidine kinase 2 186 1.6E-59 T 13-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 VEA_003836 ebf114e2b3565ae02023321097a3f492 192 SUPERFAMILY SSF52540 2 141 2.56E-41 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003836 ebf114e2b3565ae02023321097a3f492 192 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 34.527 T 13-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 VEA_003836 ebf114e2b3565ae02023321097a3f492 192 Gene3D G3DSA:3.40.50.300 2 140 1.8E-23 T 13-10-2018 VEA_003836 ebf114e2b3565ae02023321097a3f492 192 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 13-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 VEA_003836 ebf114e2b3565ae02023321097a3f492 192 Gene3D G3DSA:3.30.60.20 144 189 3.6E-8 T 13-10-2018 VEA_003836 ebf114e2b3565ae02023321097a3f492 192 SUPERFAMILY SSF57716 142 190 1.62E-16 T 13-10-2018 VEA_002442 31946b17c5c4710a6396e8ec88dc0680 478 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 250 257 - T 13-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VEA_002442 31946b17c5c4710a6396e8ec88dc0680 478 Gene3D G3DSA:3.40.605.10 17 467 3.2E-165 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VEA_002442 31946b17c5c4710a6396e8ec88dc0680 478 PIRSF PIRSF036492 28 475 2.2E-84 T 13-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 VEA_002442 31946b17c5c4710a6396e8ec88dc0680 478 SUPERFAMILY SSF53720 17 475 6.02E-153 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VEA_002442 31946b17c5c4710a6396e8ec88dc0680 478 Gene3D G3DSA:3.40.309.10 257 444 3.2E-165 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VEA_002442 31946b17c5c4710a6396e8ec88dc0680 478 Pfam PF00171 Aldehyde dehydrogenase family 19 471 1.3E-156 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VEA_002442 31946b17c5c4710a6396e8ec88dc0680 478 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 278 289 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VEA_002602 2e85a35cbeeb2cf721f134196bc2e228 209 Pfam PF01728 FtsJ-like methyltransferase 31 207 1.8E-57 T 13-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 VEA_002602 2e85a35cbeeb2cf721f134196bc2e228 209 SUPERFAMILY SSF53335 30 209 6.72E-45 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_002602 2e85a35cbeeb2cf721f134196bc2e228 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 15 208 28.934 T 13-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 VEA_002602 2e85a35cbeeb2cf721f134196bc2e228 209 Gene3D G3DSA:3.40.50.150 30 209 6.6E-61 T 13-10-2018 VEA_002602 2e85a35cbeeb2cf721f134196bc2e228 209 PIRSF PIRSF005461 1 209 1.1E-80 T 13-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 VEA_000513 37bb48e9af55633dfac34d6fe37cbff2 829 Pfam PF00384 Molybdopterin oxidoreductase 98 570 1.1E-88 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEA_000513 37bb48e9af55633dfac34d6fe37cbff2 829 Gene3D G3DSA:3.40.228.10 177 702 0.0 T 13-10-2018 VEA_000513 37bb48e9af55633dfac34d6fe37cbff2 829 Gene3D G3DSA:3.40.50.740 98 623 0.0 T 13-10-2018 VEA_000513 37bb48e9af55633dfac34d6fe37cbff2 829 Pfam PF01568 Molydopterin dinucleotide binding domain 714 822 4.2E-26 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VEA_000513 37bb48e9af55633dfac34d6fe37cbff2 829 SUPERFAMILY SSF50692 689 828 4.14E-41 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VEA_000513 37bb48e9af55633dfac34d6fe37cbff2 829 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 42 94 1.9E-16 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEA_000513 37bb48e9af55633dfac34d6fe37cbff2 829 SUPERFAMILY SSF53706 38 644 8.51E-201 T 13-10-2018 VEA_000513 37bb48e9af55633dfac34d6fe37cbff2 829 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 828 0.0 T 13-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 VEA_000513 37bb48e9af55633dfac34d6fe37cbff2 829 Gene3D G3DSA:2.40.40.20 705 828 2.9E-44 T 13-10-2018 VEA_000513 37bb48e9af55633dfac34d6fe37cbff2 829 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 46 63 - T 13-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 VEA_000513 37bb48e9af55633dfac34d6fe37cbff2 829 Hamap MF_01630 Periplasmic nitrate reductase [napA]. 1 828 32.517 T 13-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 VEA_000513 37bb48e9af55633dfac34d6fe37cbff2 829 Gene3D G3DSA:3.30.200.210 41 666 0.0 T 13-10-2018 VEA_000513 37bb48e9af55633dfac34d6fe37cbff2 829 SMART SM00926 41 95 1.9E-13 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEA_002660 057415176ceac6189d8d470f5d0d45b3 339 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 335 7.4E-140 T 13-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 VEA_002660 057415176ceac6189d8d470f5d0d45b3 339 Gene3D G3DSA:3.90.25.10 194 329 2.1E-144 T 13-10-2018 VEA_002660 057415176ceac6189d8d470f5d0d45b3 339 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 324 1.4E-58 T 13-10-2018 IPR016040 NAD(P)-binding domain VEA_002660 057415176ceac6189d8d470f5d0d45b3 339 Gene3D G3DSA:3.40.50.720 3 274 2.1E-144 T 13-10-2018 VEA_002660 057415176ceac6189d8d470f5d0d45b3 339 PRINTS PR01713 Nucleotide sugar epimerase signature 231 246 9.5E-6 T 13-10-2018 VEA_002660 057415176ceac6189d8d470f5d0d45b3 339 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 9.5E-6 T 13-10-2018 VEA_002660 057415176ceac6189d8d470f5d0d45b3 339 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 9.5E-6 T 13-10-2018 VEA_002660 057415176ceac6189d8d470f5d0d45b3 339 SUPERFAMILY SSF51735 2 336 2.14E-98 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_000709 e8f5a335883b1f1c8d8cd4952581c924 818 Gene3D G3DSA:1.20.1050.60 373 477 5.9E-215 T 13-10-2018 VEA_000709 e8f5a335883b1f1c8d8cd4952581c924 818 Gene3D G3DSA:1.20.1610.10 478 684 5.9E-215 T 13-10-2018 VEA_000709 e8f5a335883b1f1c8d8cd4952581c924 818 Gene3D G3DSA:3.30.2080.10 319 809 5.9E-215 T 13-10-2018 VEA_000709 e8f5a335883b1f1c8d8cd4952581c924 818 Gene3D G3DSA:2.70.98.10 42 372 5.9E-215 T 13-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 VEA_000709 e8f5a335883b1f1c8d8cd4952581c924 818 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 36 546 3.1E-109 T 13-10-2018 IPR005887 Alpha-1,2-mannosidase, putative VEA_000709 e8f5a335883b1f1c8d8cd4952581c924 818 Pfam PF07971 Glycosyl hydrolase family 92 262 808 1.9E-144 T 13-10-2018 IPR012939 Glycosyl hydrolase family 92 VEA_000709 e8f5a335883b1f1c8d8cd4952581c924 818 SUPERFAMILY SSF48208 284 792 1.93E-39 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VEA_001609 da18f13a9dabddb9ba752d2f1452384e 278 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_001609 da18f13a9dabddb9ba752d2f1452384e 278 Pfam PF00005 ABC transporter 25 166 1.8E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_001609 da18f13a9dabddb9ba752d2f1452384e 278 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 25 254 5.0E-106 T 13-10-2018 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 VEA_001609 da18f13a9dabddb9ba752d2f1452384e 278 SMART SM00382 34 216 2.0E-18 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_001609 da18f13a9dabddb9ba752d2f1452384e 278 Gene3D G3DSA:3.40.50.300 3 277 4.1E-63 T 13-10-2018 VEA_001609 da18f13a9dabddb9ba752d2f1452384e 278 SUPERFAMILY SSF52540 6 227 3.8E-69 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001475 1533da30ab4568a830bb5585a593de2c 300 Pfam PF00892 EamA-like transporter family 160 287 1.3E-11 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEA_001475 1533da30ab4568a830bb5585a593de2c 300 SUPERFAMILY SSF103481 195 289 2.09E-7 T 13-10-2018 VEA_001475 1533da30ab4568a830bb5585a593de2c 300 SUPERFAMILY SSF103481 49 141 2.35E-5 T 13-10-2018 VEA_003574 7bc68bf035667c864e356a4afa79460c 397 SUPERFAMILY SSF56796 26 393 1.44E-108 T 13-10-2018 VEA_003574 7bc68bf035667c864e356a4afa79460c 397 Gene3D G3DSA:3.40.50.1970 17 200 5.6E-53 T 13-10-2018 VEA_003574 7bc68bf035667c864e356a4afa79460c 397 Gene3D G3DSA:1.20.1090.10 202 394 9.1E-53 T 13-10-2018 VEA_003574 7bc68bf035667c864e356a4afa79460c 397 Pfam PF00465 Iron-containing alcohol dehydrogenase 27 386 2.0E-105 T 13-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VEA_004274 87b0f7891f04c459262b862551dbd098 179 Pfam PF11810 Domain of unknown function (DUF3332) 7 175 7.1E-42 T 13-10-2018 IPR021768 Protein of unknown function DUF3332 VEA_004346 53ccd7c30e68b62c97942e00c1a5c77b 386 Pfam PF13360 PQQ-like domain 77 310 8.0E-50 T 13-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat VEA_004346 53ccd7c30e68b62c97942e00c1a5c77b 386 SMART SM00564 106 138 8.4E-4 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VEA_004346 53ccd7c30e68b62c97942e00c1a5c77b 386 SMART SM00564 147 178 0.31 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VEA_004346 53ccd7c30e68b62c97942e00c1a5c77b 386 SMART SM00564 63 94 7.2E-7 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VEA_004346 53ccd7c30e68b62c97942e00c1a5c77b 386 SMART SM00564 322 353 0.08 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VEA_004346 53ccd7c30e68b62c97942e00c1a5c77b 386 SMART SM00564 191 223 330.0 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VEA_004346 53ccd7c30e68b62c97942e00c1a5c77b 386 SMART SM00564 243 274 80.0 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VEA_004346 53ccd7c30e68b62c97942e00c1a5c77b 386 SMART SM00564 280 312 45.0 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VEA_004346 53ccd7c30e68b62c97942e00c1a5c77b 386 SUPERFAMILY SSF50998 33 375 2.04E-80 T 13-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily VEA_004346 53ccd7c30e68b62c97942e00c1a5c77b 386 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 8 382 2.5E-140 T 13-10-2018 IPR017687 Outer membrane protein assembly factor BamB VEA_004346 53ccd7c30e68b62c97942e00c1a5c77b 386 Gene3D G3DSA:2.130.10.10 18 385 1.6E-97 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VEA_004346 53ccd7c30e68b62c97942e00c1a5c77b 386 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 3 384 40.8 T 13-10-2018 IPR017687 Outer membrane protein assembly factor BamB VEA_001394 ad1e985d9354f3143a30d5dab25f9914 188 SUPERFAMILY SSF49503 77 186 2.3E-21 T 13-10-2018 IPR008972 Cupredoxin VEA_001394 ad1e985d9354f3143a30d5dab25f9914 188 Gene3D G3DSA:2.60.40.420 63 188 1.3E-18 T 13-10-2018 IPR008972 Cupredoxin VEA_001325 d9bb9230f83ce7ad52381f6ae482a96e 401 SUPERFAMILY SSF56925 280 399 2.2E-5 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VEA_001325 d9bb9230f83ce7ad52381f6ae482a96e 401 Gene3D G3DSA:2.40.160.20 255 400 1.8E-5 T 13-10-2018 VEA_001325 d9bb9230f83ce7ad52381f6ae482a96e 401 Pfam PF10082 Putative beta-barrel porin 2 35 396 2.3E-28 T 13-10-2018 IPR018759 Putative beta-barrel porin 2 VEA_000737 614f52b7fe193917a44abb680dddd99d 398 Pfam PF07559 Flagellar basal body protein FlaE 172 279 2.1E-25 T 13-10-2018 IPR011491 Flagellar hook protein FlgE VEA_000737 614f52b7fe193917a44abb680dddd99d 398 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 380 1.8E-93 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VEA_000737 614f52b7fe193917a44abb680dddd99d 398 Gene3D G3DSA:2.60.98.20 144 280 1.4E-34 T 13-10-2018 IPR037058 Flagellar hook protein FlgE superfamily VEA_000737 614f52b7fe193917a44abb680dddd99d 398 SUPERFAMILY SSF117143 73 359 7.45E-80 T 13-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like VEA_000737 614f52b7fe193917a44abb680dddd99d 398 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 320 396 2.1E-17 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VEA_000737 614f52b7fe193917a44abb680dddd99d 398 Pfam PF00460 Flagella basal body rod protein 3 33 3.0E-9 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VEA_002810 ee104d758086a801fc9722711046f945 136 SUPERFAMILY SSF101116 6 127 5.62E-39 T 13-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 VEA_002810 ee104d758086a801fc9722711046f945 136 TIGRFAM TIGR00208 fliS: flagellar protein FliS 4 122 1.5E-23 T 13-10-2018 IPR003713 Flagellar protein FliS GO:0044780 VEA_002810 ee104d758086a801fc9722711046f945 136 PIRSF PIRSF039090 1 133 1.8E-42 T 13-10-2018 IPR003713 Flagellar protein FliS GO:0044780 VEA_002810 ee104d758086a801fc9722711046f945 136 Gene3D G3DSA:1.20.120.340 2 126 5.5E-39 T 13-10-2018 VEA_002810 ee104d758086a801fc9722711046f945 136 Pfam PF02561 Flagellar protein FliS 6 122 6.2E-37 T 13-10-2018 IPR003713 Flagellar protein FliS GO:0044780 VEA_002398 e2b6e67554aa886d701fa0821c09e87c 452 TIGRFAM TIGR00400 mgtE: magnesium transporter 20 451 8.9E-88 T 13-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 VEA_002398 e2b6e67554aa886d701fa0821c09e87c 452 Gene3D G3DSA:1.25.60.10 8 134 7.4E-20 T 13-10-2018 IPR038076 MgtE, N-terminal domain superfamily VEA_002398 e2b6e67554aa886d701fa0821c09e87c 452 SMART SM00924 36 139 7.6E-37 T 13-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain VEA_002398 e2b6e67554aa886d701fa0821c09e87c 452 Pfam PF00571 CBS domain 213 257 6.3E-5 T 13-10-2018 IPR000644 CBS domain VEA_002398 e2b6e67554aa886d701fa0821c09e87c 452 Pfam PF00571 CBS domain 140 187 0.0017 T 13-10-2018 IPR000644 CBS domain VEA_002398 e2b6e67554aa886d701fa0821c09e87c 452 Pfam PF01769 Divalent cation transporter 323 444 3.3E-23 T 13-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VEA_002398 e2b6e67554aa886d701fa0821c09e87c 452 Gene3D G3DSA:1.10.357.20 277 451 4.1E-45 T 13-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain VEA_002398 e2b6e67554aa886d701fa0821c09e87c 452 SUPERFAMILY SSF161093 280 450 1.44E-43 T 13-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 VEA_002398 e2b6e67554aa886d701fa0821c09e87c 452 Pfam PF03448 MgtE intracellular N domain 36 137 3.5E-26 T 13-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain VEA_002398 e2b6e67554aa886d701fa0821c09e87c 452 Gene3D G3DSA:3.10.580.10 135 262 8.8E-37 T 13-10-2018 VEA_002398 e2b6e67554aa886d701fa0821c09e87c 452 SUPERFAMILY SSF158791 12 136 2.88E-30 T 13-10-2018 VEA_002398 e2b6e67554aa886d701fa0821c09e87c 452 SMART SM00116 212 258 0.0024 T 13-10-2018 IPR000644 CBS domain VEA_002398 e2b6e67554aa886d701fa0821c09e87c 452 SUPERFAMILY SSF54631 138 278 1.24E-26 T 13-10-2018 VEA_002958 391e7de7fe1fc7b0ebc808ddffd2205e 151 SUPERFAMILY SSF54690 4 149 7.59E-55 T 13-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 VEA_002958 391e7de7fe1fc7b0ebc808ddffd2205e 151 Pfam PF02391 MoaE protein 8 119 1.5E-36 T 13-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 VEA_002958 391e7de7fe1fc7b0ebc808ddffd2205e 151 Gene3D G3DSA:3.90.1170.40 1 149 7.7E-54 T 13-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 VEA_001510 39ffd4c8db7fd8b99669a0f556d29545 490 Gene3D G3DSA:3.20.20.450 241 487 1.7E-73 T 13-10-2018 IPR035919 EAL domain superfamily VEA_001510 39ffd4c8db7fd8b99669a0f556d29545 490 SMART SM00052 239 481 3.3E-75 T 13-10-2018 IPR001633 EAL domain VEA_001510 39ffd4c8db7fd8b99669a0f556d29545 490 Pfam PF00563 EAL domain 246 476 2.6E-61 T 13-10-2018 IPR001633 EAL domain VEA_001510 39ffd4c8db7fd8b99669a0f556d29545 490 Pfam PF12792 CSS motif domain associated with EAL 33 119 1.9E-5 T 13-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain VEA_001510 39ffd4c8db7fd8b99669a0f556d29545 490 SUPERFAMILY SSF141868 246 484 5.36E-72 T 13-10-2018 IPR035919 EAL domain superfamily VEA_000228 a80d34005fc7adb44cc4479ca4bfbfc2 357 Pfam PF13533 Biotin-lipoyl like 68 113 1.5E-12 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VEA_000228 a80d34005fc7adb44cc4479ca4bfbfc2 357 Gene3D G3DSA:2.40.50.100 65 197 7.5E-77 T 13-10-2018 VEA_000228 a80d34005fc7adb44cc4479ca4bfbfc2 357 SUPERFAMILY SSF111369 57 274 8.11E-33 T 13-10-2018 VEA_000228 a80d34005fc7adb44cc4479ca4bfbfc2 357 Gene3D G3DSA:1.10.287.470 99 158 7.5E-77 T 13-10-2018 VEA_000228 a80d34005fc7adb44cc4479ca4bfbfc2 357 Gene3D G3DSA:2.40.420.20 279 348 7.5E-77 T 13-10-2018 VEA_000228 a80d34005fc7adb44cc4479ca4bfbfc2 357 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 351 1.2E-72 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VEA_000228 a80d34005fc7adb44cc4479ca4bfbfc2 357 Pfam PF13437 HlyD family secretion protein 163 265 1.2E-11 T 13-10-2018 VEA_000228 a80d34005fc7adb44cc4479ca4bfbfc2 357 Gene3D G3DSA:2.40.30.170 56 278 7.5E-77 T 13-10-2018 VEA_001387 8fe709d1605f32901d0f1d3c0e9f6255 368 SUPERFAMILY SSF56935 22 343 2.75E-57 T 13-10-2018 VEA_001387 8fe709d1605f32901d0f1d3c0e9f6255 368 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 231 345 9.5E-15 T 13-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VEA_001387 8fe709d1605f32901d0f1d3c0e9f6255 368 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 14 228 5.9E-30 T 13-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VEA_001387 8fe709d1605f32901d0f1d3c0e9f6255 368 Gene3D G3DSA:2.40.160.60 22 368 5.5E-62 T 13-10-2018 VEA_003714 267e5aad6a1add6a5bc47665b5a5bf6a 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 13-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_003714 267e5aad6a1add6a5bc47665b5a5bf6a 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 3.1E-27 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VEA_003714 267e5aad6a1add6a5bc47665b5a5bf6a 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 17.995 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VEA_003714 267e5aad6a1add6a5bc47665b5a5bf6a 64 SUPERFAMILY SSF143034 2 63 8.24E-21 T 13-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_003714 267e5aad6a1add6a5bc47665b5a5bf6a 64 Gene3D G3DSA:2.40.50.530 1 64 9.7E-19 T 13-10-2018 VEA_003714 267e5aad6a1add6a5bc47665b5a5bf6a 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 2.9E-19 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VEA_003714 267e5aad6a1add6a5bc47665b5a5bf6a 64 PRINTS PR00064 Ribosomal protein L35 signature 35 53 2.9E-19 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VEA_003714 267e5aad6a1add6a5bc47665b5a5bf6a 64 PRINTS PR00064 Ribosomal protein L35 signature 20 34 2.9E-19 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VEA_003714 267e5aad6a1add6a5bc47665b5a5bf6a 64 Pfam PF01632 Ribosomal protein L35 2 61 1.6E-21 T 13-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_004394 374994c9cf808d5bd20b40c46282be47 325 Gene3D G3DSA:3.30.2350.10 85 316 1.0E-71 T 13-10-2018 VEA_004394 374994c9cf808d5bd20b40c46282be47 325 Pfam PF00849 RNA pseudouridylate synthase 92 241 1.9E-30 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEA_004394 374994c9cf808d5bd20b40c46282be47 325 Pfam PF01479 S4 domain 18 65 1.3E-9 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_004394 374994c9cf808d5bd20b40c46282be47 325 SUPERFAMILY SSF55120 77 316 1.99E-80 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEA_004394 374994c9cf808d5bd20b40c46282be47 325 SMART SM00363 18 83 2.8E-9 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_004394 374994c9cf808d5bd20b40c46282be47 325 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 13-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEA_004394 374994c9cf808d5bd20b40c46282be47 325 Gene3D G3DSA:3.10.290.10 2 76 2.9E-24 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VEA_004394 374994c9cf808d5bd20b40c46282be47 325 SUPERFAMILY SSF55174 17 68 1.85E-11 T 13-10-2018 VEA_004394 374994c9cf808d5bd20b40c46282be47 325 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 15 313 1.4E-105 T 13-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEA_003764 77cd9416094335564c47a995c37c63bd 400 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 6.6E-113 T 13-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VEA_003764 77cd9416094335564c47a995c37c63bd 400 Gene3D G3DSA:3.40.50.720 1 399 6.2E-182 T 13-10-2018 VEA_003764 77cd9416094335564c47a995c37c63bd 400 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 80 2.5E-37 T 13-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VEA_003764 77cd9416094335564c47a995c37c63bd 400 Pfam PF07055 Enoyl reductase FAD binding domain 326 389 1.4E-31 T 13-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VEA_003764 77cd9416094335564c47a995c37c63bd 400 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 395 57.426 T 13-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VEA_000319 dca05421115329948a740ba34175b4c8 151 Gene3D G3DSA:3.40.50.1380 1 151 6.1E-66 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VEA_000319 dca05421115329948a740ba34175b4c8 151 PIRSF PIRSF006614 8 151 7.4E-65 T 13-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 VEA_000319 dca05421115329948a740ba34175b4c8 151 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 32.795 T 13-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 VEA_000319 dca05421115329948a740ba34175b4c8 151 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 150 4.5E-65 T 13-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 VEA_000319 dca05421115329948a740ba34175b4c8 151 SUPERFAMILY SSF52335 2 150 1.98E-58 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VEA_000319 dca05421115329948a740ba34175b4c8 151 SMART SM00851 25 118 5.5E-23 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain VEA_000319 dca05421115329948a740ba34175b4c8 151 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 13-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 VEA_000319 dca05421115329948a740ba34175b4c8 151 Pfam PF02142 MGS-like domain 25 118 2.6E-18 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain VEA_001473 52b6419d6e1ab4cc228b6a3908ee45ec 216 Gene3D G3DSA:3.40.50.880 1 216 1.7E-83 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VEA_001473 52b6419d6e1ab4cc228b6a3908ee45ec 216 PIRSF PIRSF006320 1 216 9.9E-103 T 13-10-2018 IPR026041 Glyoxalase ElbB VEA_001473 52b6419d6e1ab4cc228b6a3908ee45ec 216 SUPERFAMILY SSF52317 1 215 2.75E-54 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VEA_000056 c1ecc7761d8fe94a93b24ec36a035a98 507 Gene3D G3DSA:2.40.30.140 127 229 5.5E-157 T 13-10-2018 VEA_000056 c1ecc7761d8fe94a93b24ec36a035a98 507 SUPERFAMILY SSF51445 28 393 8.72E-96 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VEA_000056 c1ecc7761d8fe94a93b24ec36a035a98 507 Gene3D G3DSA:2.60.40.1180 423 506 8.3E-27 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta VEA_000056 c1ecc7761d8fe94a93b24ec36a035a98 507 SUPERFAMILY SSF51011 420 505 4.32E-31 T 13-10-2018 VEA_000056 c1ecc7761d8fe94a93b24ec36a035a98 507 Gene3D G3DSA:3.20.20.80 28 392 5.5E-157 T 13-10-2018 VEA_000056 c1ecc7761d8fe94a93b24ec36a035a98 507 PIRSF PIRSF001021 2 507 2.0E-228 T 13-10-2018 IPR013776 Alpha-amylase, thermostable GO:0004553|GO:0005509|GO:0005975 KEGG: 00500+3.2.1.1 VEA_000056 c1ecc7761d8fe94a93b24ec36a035a98 507 SMART SM00642 27 438 1.9E-57 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VEA_000056 c1ecc7761d8fe94a93b24ec36a035a98 507 Pfam PF00128 Alpha amylase, catalytic domain 56 387 3.3E-21 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VEA_002787 8895793ad7c7a653ff1d9d4ec7b3a104 116 Pfam PF03960 ArsC family 6 115 3.0E-20 T 13-10-2018 IPR006660 Arsenate reductase-like VEA_002787 8895793ad7c7a653ff1d9d4ec7b3a104 116 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 3 116 1.5E-47 T 13-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 VEA_002787 8895793ad7c7a653ff1d9d4ec7b3a104 116 Gene3D G3DSA:3.40.30.10 1 116 2.0E-48 T 13-10-2018 VEA_002787 8895793ad7c7a653ff1d9d4ec7b3a104 116 SUPERFAMILY SSF52833 2 116 1.24E-35 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VEA_001907 0c0e00682dd75e8ba48b001531e0f781 348 SUPERFAMILY SSF47384 125 190 2.55E-12 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEA_001907 0c0e00682dd75e8ba48b001531e0f781 348 SMART SM00388 129 194 3.0E-13 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_001907 0c0e00682dd75e8ba48b001531e0f781 348 Pfam PF00989 PAS fold 7 111 1.3E-16 T 13-10-2018 IPR013767 PAS fold GO:0006355 VEA_001907 0c0e00682dd75e8ba48b001531e0f781 348 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 121 4.8E-7 T 13-10-2018 IPR000014 PAS domain VEA_001907 0c0e00682dd75e8ba48b001531e0f781 348 Gene3D G3DSA:1.10.287.130 114 191 1.3E-13 T 13-10-2018 VEA_001907 0c0e00682dd75e8ba48b001531e0f781 348 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 347 3.0E-20 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_001907 0c0e00682dd75e8ba48b001531e0f781 348 Gene3D G3DSA:3.30.450.20 1 112 1.4E-28 T 13-10-2018 VEA_001907 0c0e00682dd75e8ba48b001531e0f781 348 SMART SM00091 4 72 1.5E-7 T 13-10-2018 IPR000014 PAS domain VEA_001907 0c0e00682dd75e8ba48b001531e0f781 348 Gene3D G3DSA:3.30.565.10 192 348 4.4E-45 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_001907 0c0e00682dd75e8ba48b001531e0f781 348 SMART SM00387 233 348 1.1E-31 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_001907 0c0e00682dd75e8ba48b001531e0f781 348 SUPERFAMILY SSF55785 8 102 9.95E-9 T 13-10-2018 IPR035965 PAS domain superfamily VEA_001907 0c0e00682dd75e8ba48b001531e0f781 348 Pfam PF00512 His Kinase A (phospho-acceptor) domain 133 189 2.9E-14 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_001907 0c0e00682dd75e8ba48b001531e0f781 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 311 329 1.3E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_001907 0c0e00682dd75e8ba48b001531e0f781 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 282 296 1.3E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_001907 0c0e00682dd75e8ba48b001531e0f781 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 347 1.3E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_001907 0c0e00682dd75e8ba48b001531e0f781 348 SUPERFAMILY SSF55874 198 347 4.06E-38 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_000786 12f5acaa8bc2a542143c4fa2d4139ae5 228 Gene3D G3DSA:1.10.10.10 1 64 1.1E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000786 12f5acaa8bc2a542143c4fa2d4139ae5 228 Pfam PF13280 WYL domain 140 226 2.4E-18 T 13-10-2018 IPR026881 WYL domain VEA_000786 12f5acaa8bc2a542143c4fa2d4139ae5 228 Pfam PF08279 HTH domain 6 59 1.8E-18 T 13-10-2018 IPR013196 Helix-turn-helix, type 11 VEA_000786 12f5acaa8bc2a542143c4fa2d4139ae5 228 SUPERFAMILY SSF46785 1 61 3.16E-11 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_001866 84c9db93e28d93bb6f9dc785e4e685f9 689 Pfam PF17191 RecG wedge domain 10 168 1.9E-21 T 13-10-2018 IPR033454 RecG, wedge domain VEA_001866 84c9db93e28d93bb6f9dc785e4e685f9 689 SUPERFAMILY SSF52540 288 649 2.61E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001866 84c9db93e28d93bb6f9dc785e4e685f9 689 SUPERFAMILY SSF52540 196 449 3.19E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001866 84c9db93e28d93bb6f9dc785e4e685f9 689 SMART SM00490 501 585 1.2E-21 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_001866 84c9db93e28d93bb6f9dc785e4e685f9 689 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 25 660 1.5E-238 T 13-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 VEA_001866 84c9db93e28d93bb6f9dc785e4e685f9 689 SMART SM00487 261 455 1.5E-29 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEA_001866 84c9db93e28d93bb6f9dc785e4e685f9 689 SUPERFAMILY SSF50249 5 170 6.34E-41 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_001866 84c9db93e28d93bb6f9dc785e4e685f9 689 Gene3D G3DSA:3.40.50.300 453 626 9.0E-53 T 13-10-2018 VEA_001866 84c9db93e28d93bb6f9dc785e4e685f9 689 Gene3D G3DSA:3.40.50.300 204 446 9.7E-83 T 13-10-2018 VEA_001866 84c9db93e28d93bb6f9dc785e4e685f9 689 Gene3D G3DSA:2.40.50.140 43 136 5.7E-13 T 13-10-2018 VEA_001866 84c9db93e28d93bb6f9dc785e4e685f9 689 Pfam PF00271 Helicase conserved C-terminal domain 476 584 5.9E-17 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_001866 84c9db93e28d93bb6f9dc785e4e685f9 689 Pfam PF00270 DEAD/DEAH box helicase 287 429 2.9E-19 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VEA_002717 c11f0bfcc6f689fcbfc1ff3a151d6965 641 SMART SM00487 15 211 2.5E-23 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEA_002717 c11f0bfcc6f689fcbfc1ff3a151d6965 641 Gene3D G3DSA:3.40.50.300 1 201 3.2E-69 T 13-10-2018 VEA_002717 c11f0bfcc6f689fcbfc1ff3a151d6965 641 Gene3D G3DSA:3.40.50.300 202 447 4.3E-45 T 13-10-2018 VEA_002717 c11f0bfcc6f689fcbfc1ff3a151d6965 641 SUPERFAMILY SSF52540 60 338 1.32E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002717 c11f0bfcc6f689fcbfc1ff3a151d6965 641 Pfam PF00271 Helicase conserved C-terminal domain 220 325 1.1E-18 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_002717 c11f0bfcc6f689fcbfc1ff3a151d6965 641 Pfam PF00270 DEAD/DEAH box helicase 22 181 3.8E-15 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VEA_002717 c11f0bfcc6f689fcbfc1ff3a151d6965 641 Pfam PF16124 RecQ zinc-binding 512 559 6.3E-8 T 13-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain VEA_002717 c11f0bfcc6f689fcbfc1ff3a151d6965 641 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 9 347 1.5E-113 T 13-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 VEA_002717 c11f0bfcc6f689fcbfc1ff3a151d6965 641 Gene3D G3DSA:1.10.10.10 501 640 1.7E-13 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_002717 c11f0bfcc6f689fcbfc1ff3a151d6965 641 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 134 143 - T 13-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site VEA_002717 c11f0bfcc6f689fcbfc1ff3a151d6965 641 SMART SM00490 245 326 4.9E-27 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_003609 e1f41605bedcf84ef2a46bdb7ca4f353 395 Pfam PF00005 ABC transporter 45 192 5.9E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_003609 e1f41605bedcf84ef2a46bdb7ca4f353 395 Pfam PF00571 CBS domain 345 393 2.2E-6 T 13-10-2018 IPR000644 CBS domain VEA_003609 e1f41605bedcf84ef2a46bdb7ca4f353 395 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 36 393 4.6E-151 T 13-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 VEA_003609 e1f41605bedcf84ef2a46bdb7ca4f353 395 Gene3D G3DSA:3.40.50.300 35 299 1.2E-80 T 13-10-2018 VEA_003609 e1f41605bedcf84ef2a46bdb7ca4f353 395 SUPERFAMILY SSF52540 43 271 2.16E-76 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003609 e1f41605bedcf84ef2a46bdb7ca4f353 395 SMART SM00382 53 242 6.0E-19 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_003609 e1f41605bedcf84ef2a46bdb7ca4f353 395 SUPERFAMILY SSF54631 274 392 3.14E-15 T 13-10-2018 VEA_003609 e1f41605bedcf84ef2a46bdb7ca4f353 395 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_003609 e1f41605bedcf84ef2a46bdb7ca4f353 395 Gene3D G3DSA:3.10.580.10 300 395 4.1E-8 T 13-10-2018 VEA_001827 005dc2484f5e38e34ccbb9208a7ffac6 238 Pfam PF03725 3' exoribonuclease family, domain 2 159 222 2.9E-10 T 13-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VEA_001827 005dc2484f5e38e34ccbb9208a7ffac6 238 Gene3D G3DSA:3.30.230.70 13 238 7.8E-63 T 13-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VEA_001827 005dc2484f5e38e34ccbb9208a7ffac6 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 9.1E-111 T 13-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 VEA_001827 005dc2484f5e38e34ccbb9208a7ffac6 238 SUPERFAMILY SSF54211 1 181 4.96E-45 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEA_001827 005dc2484f5e38e34ccbb9208a7ffac6 238 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 43.732 T 13-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 VEA_001827 005dc2484f5e38e34ccbb9208a7ffac6 238 SUPERFAMILY SSF55666 153 236 4.45E-25 T 13-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VEA_001827 005dc2484f5e38e34ccbb9208a7ffac6 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 1.9E-23 T 13-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VEA_001827 005dc2484f5e38e34ccbb9208a7ffac6 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 13-10-2018 IPR018336 Ribonuclease PH, conserved site VEA_001988 b74df9ec12f2f971737e575f42d760c0 723 Gene3D G3DSA:3.90.226.10 1 312 9.9E-91 T 13-10-2018 VEA_001988 b74df9ec12f2f971737e575f42d760c0 723 SUPERFAMILY SSF48179 496 607 4.25E-28 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VEA_001988 b74df9ec12f2f971737e575f42d760c0 723 SUPERFAMILY SSF48179 624 715 5.1E-25 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VEA_001988 b74df9ec12f2f971737e575f42d760c0 723 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 317 495 8.0E-58 T 13-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VEA_001988 b74df9ec12f2f971737e575f42d760c0 723 Gene3D G3DSA:1.10.1040.50 498 710 1.4E-73 T 13-10-2018 VEA_001988 b74df9ec12f2f971737e575f42d760c0 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 593 3.6E-25 T 13-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VEA_001988 b74df9ec12f2f971737e575f42d760c0 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 628 711 4.9E-6 T 13-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VEA_001988 b74df9ec12f2f971737e575f42d760c0 723 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 205 3.9E-39 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 VEA_001988 b74df9ec12f2f971737e575f42d760c0 723 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 715 0.0 T 13-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VEA_001988 b74df9ec12f2f971737e575f42d760c0 723 SUPERFAMILY SSF51735 315 496 1.09E-55 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_001988 b74df9ec12f2f971737e575f42d760c0 723 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 13-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VEA_001988 b74df9ec12f2f971737e575f42d760c0 723 Gene3D G3DSA:3.40.50.720 314 497 7.0E-65 T 13-10-2018 VEA_001988 b74df9ec12f2f971737e575f42d760c0 723 SUPERFAMILY SSF52096 2 304 7.68E-66 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEA_001988 b74df9ec12f2f971737e575f42d760c0 723 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 716 52.412 T 13-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VEA_004465 276ea19c63aad277a52c4c25265c63f9 319 SUPERFAMILY SSF102114 13 268 3.14E-50 T 13-10-2018 VEA_004465 276ea19c63aad277a52c4c25265c63f9 319 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 299 1.4E-136 T 13-10-2018 IPR005911 Protein YhcC-like GO:0051536 VEA_004465 276ea19c63aad277a52c4c25265c63f9 319 Pfam PF04055 Radical SAM superfamily 43 202 6.1E-18 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VEA_004465 276ea19c63aad277a52c4c25265c63f9 319 Gene3D G3DSA:3.80.30.20 42 272 2.9E-17 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VEA_004465 276ea19c63aad277a52c4c25265c63f9 319 Pfam PF16199 Radical_SAM C-terminal domain 209 279 1.9E-17 T 13-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 VEA_004465 276ea19c63aad277a52c4c25265c63f9 319 SMART SM00729 23 247 4.0E-47 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VEA_003041 65ebbb454487ab4404de42fee3033d1c 210 Pfam PF08242 Methyltransferase domain 44 137 5.5E-14 T 13-10-2018 IPR013217 Methyltransferase type 12 VEA_003041 65ebbb454487ab4404de42fee3033d1c 210 Gene3D G3DSA:3.40.50.150 2 195 5.7E-24 T 13-10-2018 VEA_003041 65ebbb454487ab4404de42fee3033d1c 210 SUPERFAMILY SSF53335 5 202 3.2E-28 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_003389 ab6ec1d59aa619ef6c14368906472285 380 Gene3D G3DSA:1.10.580.10 36 360 1.4E-116 T 13-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 VEA_003389 ab6ec1d59aa619ef6c14368906472285 380 Gene3D G3DSA:1.10.230.10 229 327 1.4E-116 T 13-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain VEA_003389 ab6ec1d59aa619ef6c14368906472285 380 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 15 380 4.9E-161 T 13-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 VEA_003389 ab6ec1d59aa619ef6c14368906472285 380 PRINTS PR00143 Citrate synthase signature 130 143 1.3E-35 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 VEA_003389 ab6ec1d59aa619ef6c14368906472285 380 PRINTS PR00143 Citrate synthase signature 256 276 1.3E-35 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 VEA_003389 ab6ec1d59aa619ef6c14368906472285 380 PRINTS PR00143 Citrate synthase signature 181 196 1.3E-35 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 VEA_003389 ab6ec1d59aa619ef6c14368906472285 380 PRINTS PR00143 Citrate synthase signature 313 329 1.3E-35 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 VEA_003389 ab6ec1d59aa619ef6c14368906472285 380 PRINTS PR00143 Citrate synthase signature 203 231 1.3E-35 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 VEA_003389 ab6ec1d59aa619ef6c14368906472285 380 PRINTS PR00143 Citrate synthase signature 333 347 1.3E-35 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 VEA_003389 ab6ec1d59aa619ef6c14368906472285 380 Pfam PF00285 Citrate synthase, C-terminal domain 15 362 4.0E-112 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 VEA_003389 ab6ec1d59aa619ef6c14368906472285 380 ProSitePatterns PS00480 Citrate synthase signature. 263 275 - T 13-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 VEA_003389 ab6ec1d59aa619ef6c14368906472285 380 PIRSF PIRSF001369 7 380 4.3E-116 T 13-10-2018 IPR024176 Citrate synthase, bacterial-type VEA_003389 ab6ec1d59aa619ef6c14368906472285 380 SUPERFAMILY SSF48256 14 380 7.59E-124 T 13-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 VEA_000222 0e5f1719e6ea5dfcd40f3096041d79dd 377 Gene3D G3DSA:3.30.1340.10 288 370 2.0E-27 T 13-10-2018 IPR035895 HPr-like superfamily VEA_000222 0e5f1719e6ea5dfcd40f3096041d79dd 377 SUPERFAMILY SSF55594 291 376 5.1E-24 T 13-10-2018 IPR035895 HPr-like superfamily VEA_000222 0e5f1719e6ea5dfcd40f3096041d79dd 377 Pfam PF00381 PTS HPr component phosphorylation site 291 370 3.6E-25 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like VEA_000222 0e5f1719e6ea5dfcd40f3096041d79dd 377 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 291 370 6.7E-23 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like VEA_000222 0e5f1719e6ea5dfcd40f3096041d79dd 377 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 328 343 - T 13-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VEA_000222 0e5f1719e6ea5dfcd40f3096041d79dd 377 SUPERFAMILY SSF55804 149 276 2.35E-18 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VEA_000222 0e5f1719e6ea5dfcd40f3096041d79dd 377 Gene3D G3DSA:3.40.930.10 143 275 1.2E-5 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VEA_000222 0e5f1719e6ea5dfcd40f3096041d79dd 377 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 139 1.2E-33 T 13-10-2018 IPR002178 PTS EIIA type-2 domain VEA_000222 0e5f1719e6ea5dfcd40f3096041d79dd 377 Gene3D G3DSA:3.40.930.10 1 142 6.1E-41 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VEA_000222 0e5f1719e6ea5dfcd40f3096041d79dd 377 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 13-10-2018 IPR002178 PTS EIIA type-2 domain VEA_000222 0e5f1719e6ea5dfcd40f3096041d79dd 377 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 299 306 - T 13-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VEA_000222 0e5f1719e6ea5dfcd40f3096041d79dd 377 SUPERFAMILY SSF55804 4 140 3.66E-39 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VEA_000222 0e5f1719e6ea5dfcd40f3096041d79dd 377 PRINTS PR00107 Phosphocarrier protein signature 342 359 5.0E-19 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like VEA_000222 0e5f1719e6ea5dfcd40f3096041d79dd 377 PRINTS PR00107 Phosphocarrier protein signature 299 315 5.0E-19 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like VEA_000222 0e5f1719e6ea5dfcd40f3096041d79dd 377 PRINTS PR00107 Phosphocarrier protein signature 327 342 5.0E-19 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like VEA_003876 cd48afd00c24bf29ed4005adb84a38d6 435 SUPERFAMILY SSF55681 118 429 2.99E-97 T 13-10-2018 VEA_003876 cd48afd00c24bf29ed4005adb84a38d6 435 Gene3D G3DSA:3.30.930.10 107 434 9.6E-113 T 13-10-2018 VEA_003876 cd48afd00c24bf29ed4005adb84a38d6 435 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 428 1.0E-171 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VEA_003876 cd48afd00c24bf29ed4005adb84a38d6 435 PIRSF PIRSF001529 1 435 1.7E-186 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VEA_003876 cd48afd00c24bf29ed4005adb84a38d6 435 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 433 40.174 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VEA_003876 cd48afd00c24bf29ed4005adb84a38d6 435 SUPERFAMILY SSF46589 1 114 2.93E-27 T 13-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 VEA_003876 cd48afd00c24bf29ed4005adb84a38d6 435 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 109 2.1E-29 T 13-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 VEA_003876 cd48afd00c24bf29ed4005adb84a38d6 435 PRINTS PR00981 Seryl-tRNA synthetase signature 327 340 2.1E-33 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VEA_003876 cd48afd00c24bf29ed4005adb84a38d6 435 PRINTS PR00981 Seryl-tRNA synthetase signature 344 360 2.1E-33 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VEA_003876 cd48afd00c24bf29ed4005adb84a38d6 435 PRINTS PR00981 Seryl-tRNA synthetase signature 275 287 2.1E-33 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VEA_003876 cd48afd00c24bf29ed4005adb84a38d6 435 PRINTS PR00981 Seryl-tRNA synthetase signature 287 300 2.1E-33 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VEA_003876 cd48afd00c24bf29ed4005adb84a38d6 435 PRINTS PR00981 Seryl-tRNA synthetase signature 362 378 2.1E-33 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VEA_003876 cd48afd00c24bf29ed4005adb84a38d6 435 Gene3D G3DSA:1.10.287.40 1 106 1.9E-20 T 13-10-2018 VEA_003876 cd48afd00c24bf29ed4005adb84a38d6 435 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 228 411 4.7E-35 T 13-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEA_001687 5de3b146c51cbd5dbc7a1c04f242ff9a 211 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 12 205 3.2E-57 T 13-10-2018 IPR004507 Flavin prenyltransferase UbiX-like VEA_001687 5de3b146c51cbd5dbc7a1c04f242ff9a 211 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 10 207 34.826 T 13-10-2018 IPR004507 Flavin prenyltransferase UbiX-like VEA_001687 5de3b146c51cbd5dbc7a1c04f242ff9a 211 Pfam PF02441 Flavoprotein 11 186 1.9E-25 T 13-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 VEA_001687 5de3b146c51cbd5dbc7a1c04f242ff9a 211 SUPERFAMILY SSF52507 10 206 5.49E-57 T 13-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 VEA_001687 5de3b146c51cbd5dbc7a1c04f242ff9a 211 Gene3D G3DSA:3.40.50.1950 2 208 8.0E-78 T 13-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 VEA_001801 662d4057ae71af63dff3b6bd555be0bc 392 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 27 374 7.8E-93 T 13-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VEA_001801 662d4057ae71af63dff3b6bd555be0bc 392 TIGRFAM TIGR03568 NeuC_NnaA: UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing 6 373 2.4E-145 T 13-10-2018 IPR020004 UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing GO:0004553|GO:0006047 Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VEA_001801 662d4057ae71af63dff3b6bd555be0bc 392 SUPERFAMILY SSF53756 5 376 5.27E-95 T 13-10-2018 VEA_001801 662d4057ae71af63dff3b6bd555be0bc 392 Gene3D G3DSA:3.40.50.2000 7 371 3.2E-89 T 13-10-2018 VEA_001801 662d4057ae71af63dff3b6bd555be0bc 392 Gene3D G3DSA:3.40.50.2000 193 360 3.2E-89 T 13-10-2018 VEA_002138 1c56cb1ac8c15ead453ff15687e2e241 407 Pfam PF02881 SRP54-type protein, helical bundle domain 123 184 1.1E-13 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VEA_002138 1c56cb1ac8c15ead453ff15687e2e241 407 SMART SM00382 202 394 1.5E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_002138 1c56cb1ac8c15ead453ff15687e2e241 407 Pfam PF00448 SRP54-type protein, GTPase domain 204 403 2.2E-77 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VEA_002138 1c56cb1ac8c15ead453ff15687e2e241 407 Gene3D G3DSA:3.40.50.300 200 392 2.5E-117 T 13-10-2018 VEA_002138 1c56cb1ac8c15ead453ff15687e2e241 407 Gene3D G3DSA:1.20.120.140 105 402 2.5E-117 T 13-10-2018 VEA_002138 1c56cb1ac8c15ead453ff15687e2e241 407 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 131 404 65.027 T 13-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 VEA_002138 1c56cb1ac8c15ead453ff15687e2e241 407 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 377 390 - T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VEA_002138 1c56cb1ac8c15ead453ff15687e2e241 407 SMART SM00963 108 188 4.9E-27 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VEA_002138 1c56cb1ac8c15ead453ff15687e2e241 407 SMART SM00962 203 404 1.3E-123 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VEA_002138 1c56cb1ac8c15ead453ff15687e2e241 407 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 131 403 2.4E-115 T 13-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 VEA_002138 1c56cb1ac8c15ead453ff15687e2e241 407 SUPERFAMILY SSF52540 201 404 5.98E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002138 1c56cb1ac8c15ead453ff15687e2e241 407 SUPERFAMILY SSF47364 103 182 1.28E-22 T 13-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 VEA_003781 076f44e5ddacfcaf9e85ddfc4a918e3a 233 SUPERFAMILY SSF55174 1 81 7.07E-12 T 13-10-2018 VEA_003781 076f44e5ddacfcaf9e85ddfc4a918e3a 233 Pfam PF00849 RNA pseudouridylate synthase 61 193 6.9E-18 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEA_003781 076f44e5ddacfcaf9e85ddfc4a918e3a 233 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 225 9.6E-48 T 13-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VEA_003781 076f44e5ddacfcaf9e85ddfc4a918e3a 233 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 98 112 - T 13-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VEA_003781 076f44e5ddacfcaf9e85ddfc4a918e3a 233 SMART SM00363 1 59 9.9E-9 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_003781 076f44e5ddacfcaf9e85ddfc4a918e3a 233 Pfam PF01479 S4 domain 1 47 3.7E-10 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_003781 076f44e5ddacfcaf9e85ddfc4a918e3a 233 Gene3D G3DSA:3.30.70.580 62 228 2.9E-56 T 13-10-2018 VEA_003781 076f44e5ddacfcaf9e85ddfc4a918e3a 233 Gene3D G3DSA:3.30.70.1560 127 210 2.9E-56 T 13-10-2018 VEA_003781 076f44e5ddacfcaf9e85ddfc4a918e3a 233 Gene3D G3DSA:3.10.290.10 1 61 2.6E-16 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VEA_003781 076f44e5ddacfcaf9e85ddfc4a918e3a 233 SUPERFAMILY SSF55120 60 228 2.08E-43 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEA_004238 8d2151f69633fd718610df52eacae15f 344 Gene3D G3DSA:3.30.70.260 244 344 7.2E-41 T 13-10-2018 VEA_004238 8d2151f69633fd718610df52eacae15f 344 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 2.1E-197 T 13-10-2018 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 VEA_004238 8d2151f69633fd718610df52eacae15f 344 Gene3D G3DSA:3.40.50.300 1 232 1.8E-74 T 13-10-2018 VEA_004238 8d2151f69633fd718610df52eacae15f 344 SMART SM00930 265 340 1.8E-28 T 13-10-2018 IPR018449 NIL domain VEA_004238 8d2151f69633fd718610df52eacae15f 344 Pfam PF09383 NIL domain 268 339 1.5E-21 T 13-10-2018 IPR018449 NIL domain VEA_004238 8d2151f69633fd718610df52eacae15f 344 Pfam PF00005 ABC transporter 21 169 2.9E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_004238 8d2151f69633fd718610df52eacae15f 344 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_004238 8d2151f69633fd718610df52eacae15f 344 SUPERFAMILY SSF55021 248 343 1.72E-26 T 13-10-2018 VEA_004238 8d2151f69633fd718610df52eacae15f 344 SMART SM00382 30 235 9.7E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_004238 8d2151f69633fd718610df52eacae15f 344 SUPERFAMILY SSF52540 1 239 1.6E-83 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003596 37d4f43bca43666c26357e7440ead6f9 333 SUPERFAMILY SSF56784 61 308 7.89E-24 T 13-10-2018 IPR036412 HAD-like superfamily VEA_003596 37d4f43bca43666c26357e7440ead6f9 333 Pfam PF12710 haloacid dehalogenase-like hydrolase 64 268 4.2E-22 T 13-10-2018 VEA_003596 37d4f43bca43666c26357e7440ead6f9 333 Gene3D G3DSA:3.40.50.1000 110 307 5.8E-43 T 13-10-2018 IPR023214 HAD superfamily VEA_003519 c9b388dc23cc007b02978efcc3adff09 280 Gene3D G3DSA:3.30.450.20 1 102 1.9E-20 T 13-10-2018 VEA_003519 c9b388dc23cc007b02978efcc3adff09 280 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 114 276 3.2E-54 T 13-10-2018 IPR000160 GGDEF domain VEA_003519 c9b388dc23cc007b02978efcc3adff09 280 Pfam PF00990 Diguanylate cyclase, GGDEF domain 118 273 4.8E-44 T 13-10-2018 IPR000160 GGDEF domain VEA_003519 c9b388dc23cc007b02978efcc3adff09 280 SUPERFAMILY SSF55073 121 279 1.41E-50 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_003519 c9b388dc23cc007b02978efcc3adff09 280 SMART SM00267 105 277 3.6E-59 T 13-10-2018 IPR000160 GGDEF domain VEA_003519 c9b388dc23cc007b02978efcc3adff09 280 Gene3D G3DSA:3.30.70.270 110 280 1.4E-56 T 13-10-2018 VEA_000409 b43cabb748db486caacf9475e26365a4 695 SUPERFAMILY SSF56801 59 666 3.27E-116 T 13-10-2018 VEA_000409 b43cabb748db486caacf9475e26365a4 695 Gene3D G3DSA:3.40.50.12780 99 561 6.1E-56 T 13-10-2018 VEA_000409 b43cabb748db486caacf9475e26365a4 695 Gene3D G3DSA:3.30.300.30 565 690 2.8E-15 T 13-10-2018 VEA_000409 b43cabb748db486caacf9475e26365a4 695 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 24 683 2.9E-230 T 13-10-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 VEA_000409 b43cabb748db486caacf9475e26365a4 695 Pfam PF13193 AMP-binding enzyme C-terminal domain 579 653 2.1E-5 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VEA_000409 b43cabb748db486caacf9475e26365a4 695 ProSitePatterns PS00455 Putative AMP-binding domain signature. 310 321 - T 13-10-2018 IPR020845 AMP-binding, conserved site VEA_000409 b43cabb748db486caacf9475e26365a4 695 Pfam PF00501 AMP-binding enzyme 130 565 1.3E-46 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VEA_000040 9b084d460b997b175071ace49a4219c9 117 Gene3D G3DSA:3.30.1330.40 1 117 8.9E-40 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VEA_000040 9b084d460b997b175071ace49a4219c9 117 SUPERFAMILY SSF55298 8 115 3.46E-31 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VEA_000040 9b084d460b997b175071ace49a4219c9 117 Pfam PF01042 Endoribonuclease L-PSP 11 114 4.8E-23 T 13-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VEA_001368 708601d81fa668527feee75af9d09983 519 Pfam PF00672 HAMP domain 190 236 2.9E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_001368 708601d81fa668527feee75af9d09983 519 SMART SM00304 188 242 1.5E-12 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_001368 708601d81fa668527feee75af9d09983 519 Gene3D G3DSA:1.10.287.950 187 519 3.1E-71 T 13-10-2018 VEA_001368 708601d81fa668527feee75af9d09983 519 SUPERFAMILY SSF103190 30 164 1.53E-23 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VEA_001368 708601d81fa668527feee75af9d09983 519 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 302 483 8.0E-44 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_001368 708601d81fa668527feee75af9d09983 519 Gene3D G3DSA:3.30.450.20 25 157 9.6E-6 T 13-10-2018 VEA_001368 708601d81fa668527feee75af9d09983 519 SMART SM00283 257 518 1.5E-73 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_001368 708601d81fa668527feee75af9d09983 519 SUPERFAMILY SSF58104 210 519 1.96E-76 T 13-10-2018 VEA_001368 708601d81fa668527feee75af9d09983 519 Pfam PF17203 Single cache domain 3 56 164 2.8E-12 T 13-10-2018 IPR033463 Single cache domain 3 VEA_002063 54669f1fa0f2ba6ca4de0500b23b9230 375 Pfam PF02222 ATP-grasp domain 101 274 4.0E-52 T 13-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type VEA_002063 54669f1fa0f2ba6ca4de0500b23b9230 375 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 2 346 36.828 T 13-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 VEA_002063 54669f1fa0f2ba6ca4de0500b23b9230 375 Gene3D G3DSA:3.30.470.20 164 374 6.3E-72 T 13-10-2018 VEA_002063 54669f1fa0f2ba6ca4de0500b23b9230 375 SUPERFAMILY SSF52440 1 88 9.93E-16 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VEA_002063 54669f1fa0f2ba6ca4de0500b23b9230 375 SUPERFAMILY SSF51246 299 369 2.83E-19 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 VEA_002063 54669f1fa0f2ba6ca4de0500b23b9230 375 SUPERFAMILY SSF56059 92 295 3.18E-56 T 13-10-2018 VEA_002063 54669f1fa0f2ba6ca4de0500b23b9230 375 Gene3D G3DSA:3.40.50.20 1 74 1.7E-17 T 13-10-2018 VEA_002063 54669f1fa0f2ba6ca4de0500b23b9230 375 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 2 350 7.5E-105 T 13-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 VEA_002063 54669f1fa0f2ba6ca4de0500b23b9230 375 Gene3D G3DSA:3.30.1490.20 102 163 2.2E-17 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VEA_002541 54fc2b189c5e48374d9fd23ac51a1716 246 Pfam PF07072 Cell division protein 18 224 3.7E-75 T 13-10-2018 IPR009777 Cell division protein ZapD VEA_002541 54fc2b189c5e48374d9fd23ac51a1716 246 SUPERFAMILY SSF160950 1 245 3.01E-93 T 13-10-2018 IPR036268 ZapD domain superfamily VEA_002541 54fc2b189c5e48374d9fd23ac51a1716 246 Hamap MF_01092 Cell division protein ZapD [zapD]. 3 245 32.764 T 13-10-2018 IPR009777 Cell division protein ZapD VEA_002541 54fc2b189c5e48374d9fd23ac51a1716 246 Gene3D G3DSA:1.10.3900.10 12 178 4.1E-88 T 13-10-2018 VEA_002541 54fc2b189c5e48374d9fd23ac51a1716 246 Gene3D G3DSA:2.60.440.10 6 245 4.1E-88 T 13-10-2018 IPR027462 Z ring-associated protein D, C-terminal VEA_003140 6f506187591ad2d09b7ef7f591c1df32 239 SUPERFAMILY SSF53098 41 227 4.4E-39 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VEA_003140 6f506187591ad2d09b7ef7f591c1df32 239 Gene3D G3DSA:3.30.420.10 44 230 2.0E-37 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VEA_003140 6f506187591ad2d09b7ef7f591c1df32 239 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 44 229 9.7E-25 T 13-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_003140 6f506187591ad2d09b7ef7f591c1df32 239 SMART SM00479 48 229 1.7E-22 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VEA_003140 6f506187591ad2d09b7ef7f591c1df32 239 Pfam PF00929 Exonuclease 50 220 2.4E-14 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VEA_003253 e97c4814000db33ed9f1fc8c9a367ad7 448 Pfam PF13356 Arm DNA-binding domain 6 90 9.8E-17 T 13-10-2018 IPR025166 Integrase, DNA-binding domain VEA_003253 e97c4814000db33ed9f1fc8c9a367ad7 448 Gene3D G3DSA:1.10.150.130 106 244 6.7E-16 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal VEA_003253 e97c4814000db33ed9f1fc8c9a367ad7 448 SUPERFAMILY SSF56349 155 415 1.44E-39 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VEA_003253 e97c4814000db33ed9f1fc8c9a367ad7 448 Pfam PF00589 Phage integrase family 247 408 1.8E-14 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VEA_003253 e97c4814000db33ed9f1fc8c9a367ad7 448 Gene3D G3DSA:3.30.160.390 4 105 5.2E-27 T 13-10-2018 IPR038488 Integrase, DNA-binding domain superfamily VEA_003253 e97c4814000db33ed9f1fc8c9a367ad7 448 Gene3D G3DSA:1.10.443.10 245 418 1.1E-12 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VEA_002332 0434b8f5a05bcdaa7fd0ca134c8e4546 129 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 13-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 VEA_002332 0434b8f5a05bcdaa7fd0ca134c8e4546 129 Gene3D G3DSA:3.30.70.60 1 92 4.2E-33 T 13-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 VEA_002332 0434b8f5a05bcdaa7fd0ca134c8e4546 129 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 22.163 T 13-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 VEA_002332 0434b8f5a05bcdaa7fd0ca134c8e4546 129 SUPERFAMILY SSF54995 1 103 2.09E-38 T 13-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002332 0434b8f5a05bcdaa7fd0ca134c8e4546 129 Pfam PF01250 Ribosomal protein S6 3 91 1.4E-28 T 13-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002332 0434b8f5a05bcdaa7fd0ca134c8e4546 129 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 7.9E-39 T 13-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_000872 9442837cf5de204f18cf27f51bf34e25 364 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 5 174 5.6E-67 T 13-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal VEA_000872 9442837cf5de204f18cf27f51bf34e25 364 Gene3D G3DSA:1.10.3820.10 2 180 3.1E-36 T 13-10-2018 IPR038266 NapC/NirT cytochrome c superfamily VEA_000872 9442837cf5de204f18cf27f51bf34e25 364 PIRSF PIRSF000014 1 364 8.8E-160 T 13-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 VEA_000872 9442837cf5de204f18cf27f51bf34e25 364 SUPERFAMILY SSF48695 13 176 7.15E-50 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily VEA_004198 29fb516479f7b2065f54faeccfb4bd9a 560 ProSitePatterns PS00785 5'-nucleotidase signature 1. 38 50 - T 13-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEA_004198 29fb516479f7b2065f54faeccfb4bd9a 560 Gene3D G3DSA:3.90.780.10 366 552 1.5E-58 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEA_004198 29fb516479f7b2065f54faeccfb4bd9a 560 Gene3D G3DSA:3.60.21.10 30 365 4.3E-124 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like VEA_004198 29fb516479f7b2065f54faeccfb4bd9a 560 SUPERFAMILY SSF56300 32 364 2.6E-94 T 13-10-2018 VEA_004198 29fb516479f7b2065f54faeccfb4bd9a 560 ProSitePatterns PS00786 5'-nucleotidase signature 2. 113 124 - T 13-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEA_004198 29fb516479f7b2065f54faeccfb4bd9a 560 Pfam PF00149 Calcineurin-like phosphoesterase 38 259 5.4E-22 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VEA_004198 29fb516479f7b2065f54faeccfb4bd9a 560 PRINTS PR01607 Apyrase family signature 211 228 1.0E-50 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEA_004198 29fb516479f7b2065f54faeccfb4bd9a 560 PRINTS PR01607 Apyrase family signature 487 506 1.0E-50 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEA_004198 29fb516479f7b2065f54faeccfb4bd9a 560 PRINTS PR01607 Apyrase family signature 242 265 1.0E-50 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEA_004198 29fb516479f7b2065f54faeccfb4bd9a 560 PRINTS PR01607 Apyrase family signature 287 307 1.0E-50 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEA_004198 29fb516479f7b2065f54faeccfb4bd9a 560 PRINTS PR01607 Apyrase family signature 420 443 1.0E-50 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEA_004198 29fb516479f7b2065f54faeccfb4bd9a 560 PRINTS PR01607 Apyrase family signature 36 54 1.0E-50 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEA_004198 29fb516479f7b2065f54faeccfb4bd9a 560 Pfam PF02872 5'-nucleotidase, C-terminal domain 367 512 5.4E-34 T 13-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEA_004198 29fb516479f7b2065f54faeccfb4bd9a 560 SUPERFAMILY SSF55816 366 542 1.57E-52 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEA_000679 a1523765d01cb8a0e6c0f597ae8cbc1e 330 SUPERFAMILY SSF54826 2 110 2.16E-20 T 13-10-2018 VEA_000679 a1523765d01cb8a0e6c0f597ae8cbc1e 330 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 8 119 6.1E-9 T 13-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain VEA_000679 a1523765d01cb8a0e6c0f597ae8cbc1e 330 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 180 211 - T 13-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 VEA_000679 a1523765d01cb8a0e6c0f597ae8cbc1e 330 SUPERFAMILY SSF51604 123 319 2.36E-53 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VEA_000679 a1523765d01cb8a0e6c0f597ae8cbc1e 330 SMART SM00922 137 230 2.8E-15 T 13-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal VEA_000679 a1523765d01cb8a0e6c0f597ae8cbc1e 330 Pfam PF13378 Enolase C-terminal domain-like 140 326 5.3E-28 T 13-10-2018 IPR029065 Enolase C-terminal domain-like VEA_000679 a1523765d01cb8a0e6c0f597ae8cbc1e 330 Gene3D G3DSA:3.20.20.120 122 328 9.9E-58 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VEA_000679 a1523765d01cb8a0e6c0f597ae8cbc1e 330 Gene3D G3DSA:3.30.390.10 1 110 2.1E-25 T 13-10-2018 IPR029017 Enolase-like, N-terminal VEA_003682 3080771e1ffbfe2c5204082adfa72ad7 289 Pfam PF03466 LysR substrate binding domain 89 287 4.0E-45 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_003682 3080771e1ffbfe2c5204082adfa72ad7 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.3E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_003682 3080771e1ffbfe2c5204082adfa72ad7 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.3E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_003682 3080771e1ffbfe2c5204082adfa72ad7 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.3E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_003682 3080771e1ffbfe2c5204082adfa72ad7 289 SUPERFAMILY SSF53850 90 288 5.34E-43 T 13-10-2018 VEA_003682 3080771e1ffbfe2c5204082adfa72ad7 289 Gene3D G3DSA:3.40.190.290 90 289 8.2E-48 T 13-10-2018 VEA_003682 3080771e1ffbfe2c5204082adfa72ad7 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.4E-20 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_003682 3080771e1ffbfe2c5204082adfa72ad7 289 Gene3D G3DSA:1.10.10.10 1 84 3.3E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_003682 3080771e1ffbfe2c5204082adfa72ad7 289 SUPERFAMILY SSF46785 1 86 2.72E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_001357 77c5e8b718cc8e8e4f1a2ffa8ce4b70f 177 PIRSF PIRSF030840 2 177 8.1E-62 T 13-10-2018 IPR010413 Heme utilization carrier protein HutX-like VEA_001357 77c5e8b718cc8e8e4f1a2ffa8ce4b70f 177 TIGRFAM TIGR04108 HutX: putative heme utilization carrier protein HutX 18 171 1.8E-61 T 13-10-2018 IPR010413 Heme utilization carrier protein HutX-like VEA_001357 77c5e8b718cc8e8e4f1a2ffa8ce4b70f 177 Gene3D G3DSA:3.40.1570.10 2 177 7.9E-60 T 13-10-2018 VEA_001357 77c5e8b718cc8e8e4f1a2ffa8ce4b70f 177 SUPERFAMILY SSF144064 5 174 4.71E-56 T 13-10-2018 VEA_001357 77c5e8b718cc8e8e4f1a2ffa8ce4b70f 177 Pfam PF06228 Haem utilisation ChuX/HutX 34 171 1.3E-31 T 13-10-2018 IPR010413 Heme utilization carrier protein HutX-like VEA_001132 18c20895bc78b675e0c6b95dae5686cb 885 Pfam PF09985 C-terminal binding-module, SLH-like, of glucodextranase 690 871 8.1E-17 T 13-10-2018 IPR019248 Glucodextranase-like, C-terminal VEA_001132 18c20895bc78b675e0c6b95dae5686cb 885 Pfam PF00128 Alpha amylase, catalytic domain 84 432 2.0E-61 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VEA_001132 18c20895bc78b675e0c6b95dae5686cb 885 Gene3D G3DSA:3.20.20.80 36 469 2.7E-106 T 13-10-2018 VEA_001132 18c20895bc78b675e0c6b95dae5686cb 885 SMART SM00642 52 467 2.4E-69 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VEA_001132 18c20895bc78b675e0c6b95dae5686cb 885 SUPERFAMILY SSF51445 40 473 1.71E-83 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VEA_001132 18c20895bc78b675e0c6b95dae5686cb 885 SUPERFAMILY SSF49344 687 869 8.63E-21 T 13-10-2018 VEA_001132 18c20895bc78b675e0c6b95dae5686cb 885 SUPERFAMILY SSF51011 488 564 7.62E-8 T 13-10-2018 VEA_001132 18c20895bc78b675e0c6b95dae5686cb 885 Gene3D G3DSA:2.60.40.1180 471 564 8.7E-8 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta VEA_001132 18c20895bc78b675e0c6b95dae5686cb 885 Gene3D G3DSA:2.60.40.1190 673 879 1.9E-16 T 13-10-2018 VEA_002585 17ada751e2cf86e997e63859f9986a74 328 Gene3D G3DSA:1.10.3720.10 87 326 3.6E-18 T 13-10-2018 IPR035906 MetI-like superfamily VEA_002585 17ada751e2cf86e997e63859f9986a74 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 324 3.1E-38 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_002585 17ada751e2cf86e997e63859f9986a74 328 SUPERFAMILY SSF161098 93 307 6.76E-15 T 13-10-2018 IPR035906 MetI-like superfamily VEA_000442 fe514e35bea244292bb8a166d4598031 522 Pfam PF06812 ImpA, N-terminal, type VI secretion system 10 120 4.5E-26 T 13-10-2018 IPR010657 ImpA, N-terminal VEA_000442 fe514e35bea244292bb8a166d4598031 522 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 7 495 2.6E-79 T 13-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 VEA_000442 fe514e35bea244292bb8a166d4598031 522 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 244 495 1.1E-66 T 13-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 VEA_000050 5dc0048fc004a82bb3866ce4ebe0bd29 300 Gene3D G3DSA:1.10.10.10 3 86 4.9E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000050 5dc0048fc004a82bb3866ce4ebe0bd29 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 63 1.5E-18 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000050 5dc0048fc004a82bb3866ce4ebe0bd29 300 Pfam PF03466 LysR substrate binding domain 89 292 4.0E-42 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_000050 5dc0048fc004a82bb3866ce4ebe0bd29 300 Gene3D G3DSA:3.40.190.10 91 289 5.2E-67 T 13-10-2018 VEA_000050 5dc0048fc004a82bb3866ce4ebe0bd29 300 SUPERFAMILY SSF53850 89 295 2.02E-43 T 13-10-2018 VEA_000050 5dc0048fc004a82bb3866ce4ebe0bd29 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.0E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000050 5dc0048fc004a82bb3866ce4ebe0bd29 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.0E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000050 5dc0048fc004a82bb3866ce4ebe0bd29 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.0E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000050 5dc0048fc004a82bb3866ce4ebe0bd29 300 Gene3D G3DSA:3.40.190.10 163 264 5.2E-67 T 13-10-2018 VEA_000050 5dc0048fc004a82bb3866ce4ebe0bd29 300 SUPERFAMILY SSF46785 3 112 9.52E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_002505 ab0629d252b02ad3406433964480b59a 265 SUPERFAMILY SSF101386 138 240 9.53E-24 T 13-10-2018 VEA_002505 ab0629d252b02ad3406433964480b59a 265 SUPERFAMILY SSF101386 3 105 3.6E-25 T 13-10-2018 VEA_002505 ab0629d252b02ad3406433964480b59a 265 Gene3D G3DSA:1.10.287.1080 132 264 1.1E-45 T 13-10-2018 VEA_002505 ab0629d252b02ad3406433964480b59a 265 Gene3D G3DSA:1.10.287.1080 2 126 3.5E-45 T 13-10-2018 VEA_002505 ab0629d252b02ad3406433964480b59a 265 TIGRFAM TIGR00444 mazG: MazG family protein 11 260 2.5E-103 T 13-10-2018 IPR011551 NTP pyrophosphohydrolase MazG VEA_002505 ab0629d252b02ad3406433964480b59a 265 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 28 101 1.3E-27 T 13-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core VEA_002505 ab0629d252b02ad3406433964480b59a 265 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 171 229 2.0E-5 T 13-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core VEA_003941 5c36e04801127f87de062e3cbb8d8ac0 334 SUPERFAMILY SSF47413 1 59 6.95E-18 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEA_003941 5c36e04801127f87de062e3cbb8d8ac0 334 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 334 62.651 T 13-10-2018 IPR023588 Transcription regulator HTH, PurR GO:0006355 VEA_003941 5c36e04801127f87de062e3cbb8d8ac0 334 Gene3D G3DSA:3.40.50.2300 161 323 1.3E-91 T 13-10-2018 VEA_003941 5c36e04801127f87de062e3cbb8d8ac0 334 Gene3D G3DSA:3.40.50.2300 69 322 1.3E-91 T 13-10-2018 VEA_003941 5c36e04801127f87de062e3cbb8d8ac0 334 SMART SM00354 1 71 1.3E-38 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEA_003941 5c36e04801127f87de062e3cbb8d8ac0 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.0E-6 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEA_003941 5c36e04801127f87de062e3cbb8d8ac0 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.0E-6 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEA_003941 5c36e04801127f87de062e3cbb8d8ac0 334 Pfam PF13377 Periplasmic binding protein-like domain 170 330 6.7E-44 T 13-10-2018 VEA_003941 5c36e04801127f87de062e3cbb8d8ac0 334 Gene3D G3DSA:1.10.260.40 3 59 9.1E-25 T 13-10-2018 VEA_003941 5c36e04801127f87de062e3cbb8d8ac0 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 13-10-2018 VEA_003941 5c36e04801127f87de062e3cbb8d8ac0 334 SUPERFAMILY SSF53822 60 331 5.5E-95 T 13-10-2018 IPR028082 Periplasmic binding protein-like I VEA_003941 5c36e04801127f87de062e3cbb8d8ac0 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.8E-21 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEA_000065 a591edab3be818b18028420e1735c7f1 320 Gene3D G3DSA:3.30.450.20 24 100 5.2E-13 T 13-10-2018 VEA_000065 a591edab3be818b18028420e1735c7f1 320 Gene3D G3DSA:3.30.70.270 154 320 3.7E-48 T 13-10-2018 VEA_000065 a591edab3be818b18028420e1735c7f1 320 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 49 156 7.6E-12 T 13-10-2018 IPR000014 PAS domain VEA_000065 a591edab3be818b18028420e1735c7f1 320 Pfam PF00990 Diguanylate cyclase, GGDEF domain 160 313 1.3E-40 T 13-10-2018 IPR000160 GGDEF domain VEA_000065 a591edab3be818b18028420e1735c7f1 320 Gene3D G3DSA:2.10.70.100 104 151 3.1E-12 T 13-10-2018 VEA_000065 a591edab3be818b18028420e1735c7f1 320 Pfam PF08447 PAS fold 57 143 6.1E-21 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 VEA_000065 a591edab3be818b18028420e1735c7f1 320 SUPERFAMILY SSF55785 49 151 1.26E-18 T 13-10-2018 IPR035965 PAS domain superfamily VEA_000065 a591edab3be818b18028420e1735c7f1 320 SMART SM00086 106 149 2.0E-5 T 13-10-2018 IPR001610 PAC motif VEA_000065 a591edab3be818b18028420e1735c7f1 320 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 156 317 9.2E-37 T 13-10-2018 IPR000160 GGDEF domain VEA_000065 a591edab3be818b18028420e1735c7f1 320 SUPERFAMILY SSF55073 165 317 6.12E-39 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_000065 a591edab3be818b18028420e1735c7f1 320 SMART SM00267 149 318 1.4E-49 T 13-10-2018 IPR000160 GGDEF domain VEA_001067 27a0b69271539082e51a4096d4dded4e 678 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 66 678 5.1E-92 T 13-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 VEA_001067 27a0b69271539082e51a4096d4dded4e 678 SUPERFAMILY SSF56935 33 678 2.83E-125 T 13-10-2018 VEA_001067 27a0b69271539082e51a4096d4dded4e 678 Pfam PF00593 TonB dependent receptor 271 676 8.1E-48 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VEA_001067 27a0b69271539082e51a4096d4dded4e 678 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 162 4.7E-22 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain VEA_001067 27a0b69271539082e51a4096d4dded4e 678 Gene3D G3DSA:2.170.130.10 48 173 5.2E-37 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VEA_001067 27a0b69271539082e51a4096d4dded4e 678 Gene3D G3DSA:2.40.170.20 174 678 1.8E-97 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VEA_001426 2ddbd3f82c530b63ba308a96ee58f0b2 133 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 28 117 1.8E-20 T 13-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 VEA_001426 2ddbd3f82c530b63ba308a96ee58f0b2 133 SUPERFAMILY SSF51316 2 132 2.72E-31 T 13-10-2018 IPR011057 Mss4-like superfamily VEA_001426 2ddbd3f82c530b63ba308a96ee58f0b2 133 Gene3D G3DSA:3.90.1590.10 1 121 7.2E-12 T 13-10-2018 VEA_001601 4713f89197a0b3ada7a8e38f4907a74b 144 SUPERFAMILY SSF55729 2 140 2.03E-25 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_001601 4713f89197a0b3ada7a8e38f4907a74b 144 Gene3D G3DSA:3.40.630.30 1 143 2.7E-31 T 13-10-2018 VEA_001601 4713f89197a0b3ada7a8e38f4907a74b 144 Pfam PF00583 Acetyltransferase (GNAT) family 29 121 4.7E-15 T 13-10-2018 IPR000182 GNAT domain VEA_002726 ac204161a9a6f62e2bc2b5f6f7002237 234 Gene3D G3DSA:2.40.30.70 1 142 1.5E-42 T 13-10-2018 IPR036414 YaeB, N-terminal domain superfamily VEA_002726 ac204161a9a6f62e2bc2b5f6f7002237 234 ProSitePatterns PS01318 TsaA-like domain signature. 88 99 - T 13-10-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site VEA_002726 ac204161a9a6f62e2bc2b5f6f7002237 234 Pfam PF01980 Uncharacterised protein family UPF0066 22 144 8.5E-39 T 13-10-2018 IPR023370 YaeB-like, N-terminal domain VEA_002726 ac204161a9a6f62e2bc2b5f6f7002237 234 Gene3D G3DSA:3.30.2310.10 143 230 9.0E-21 T 13-10-2018 VEA_002726 ac204161a9a6f62e2bc2b5f6f7002237 234 SUPERFAMILY SSF118196 3 229 1.09E-78 T 13-10-2018 IPR036413 YaeB-like superfamily VEA_002726 ac204161a9a6f62e2bc2b5f6f7002237 234 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 4 150 2.4E-48 T 13-10-2018 IPR023370 YaeB-like, N-terminal domain VEA_000632 7ee728fcd3cd52863f96edeea42fe851 395 Pfam PF00557 Metallopeptidase family M24 169 377 1.1E-30 T 13-10-2018 IPR000994 Peptidase M24 VEA_000632 7ee728fcd3cd52863f96edeea42fe851 395 TIGRFAM TIGR02993 ectoine_eutD: ectoine utilization protein EutD 4 394 4.5E-188 T 13-10-2018 IPR014335 Ectoine utilization protein EutD KEGG: 00260+3.5.4.44|MetaCyc: PWY-7855 VEA_000632 7ee728fcd3cd52863f96edeea42fe851 395 SUPERFAMILY SSF55920 161 393 7.2E-53 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like VEA_000632 7ee728fcd3cd52863f96edeea42fe851 395 Pfam PF01321 Creatinase/Prolidase N-terminal domain 16 161 6.6E-21 T 13-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 VEA_000632 7ee728fcd3cd52863f96edeea42fe851 395 Gene3D G3DSA:3.40.350.10 2 159 1.1E-34 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VEA_000632 7ee728fcd3cd52863f96edeea42fe851 395 SUPERFAMILY SSF53092 2 159 8.37E-40 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VEA_000632 7ee728fcd3cd52863f96edeea42fe851 395 Gene3D G3DSA:3.90.230.10 160 393 2.0E-40 T 13-10-2018 VEA_004089 b7884b72431e5f160c8d3b3b695d6781 388 SUPERFAMILY SSF53098 16 225 3.39E-70 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VEA_004089 b7884b72431e5f160c8d3b3b695d6781 388 Pfam PF01612 3'-5' exonuclease 19 186 1.0E-40 T 13-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VEA_004089 b7884b72431e5f160c8d3b3b695d6781 388 TIGRFAM TIGR01388 rnd: ribonuclease D 21 385 2.7E-147 T 13-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 VEA_004089 b7884b72431e5f160c8d3b3b695d6781 388 SUPERFAMILY SSF47819 209 317 4.8E-22 T 13-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 VEA_004089 b7884b72431e5f160c8d3b3b695d6781 388 Gene3D G3DSA:3.30.420.10 17 210 1.6E-68 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VEA_004089 b7884b72431e5f160c8d3b3b695d6781 388 Pfam PF00570 HRDC domain 229 295 5.1E-7 T 13-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 VEA_004089 b7884b72431e5f160c8d3b3b695d6781 388 SUPERFAMILY SSF47819 312 387 4.05E-21 T 13-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 VEA_004089 b7884b72431e5f160c8d3b3b695d6781 388 SMART SM00474 19 187 4.2E-44 T 13-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VEA_004089 b7884b72431e5f160c8d3b3b695d6781 388 Gene3D G3DSA:1.10.150.80 212 309 4.3E-16 T 13-10-2018 VEA_004089 b7884b72431e5f160c8d3b3b695d6781 388 Gene3D G3DSA:1.10.150.80 310 388 2.7E-27 T 13-10-2018 VEA_004089 b7884b72431e5f160c8d3b3b695d6781 388 Hamap MF_01899 Ribonuclease D [rnd]. 19 388 43.613 T 13-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 VEA_002783 a184e8ef1bc6f3419f139c4b3e4e2f10 417 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 4 395 7.8E-111 T 13-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 VEA_002783 a184e8ef1bc6f3419f139c4b3e4e2f10 417 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 319 339 - T 13-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 VEA_002783 a184e8ef1bc6f3419f139c4b3e4e2f10 417 Pfam PF00860 Permease family 3 371 2.9E-90 T 13-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 VEA_000927 944f4bd8c241457edc3d1f631a3990fd 289 Pfam PF03466 LysR substrate binding domain 88 288 2.0E-45 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_000927 944f4bd8c241457edc3d1f631a3990fd 289 Gene3D G3DSA:1.10.10.10 3 92 1.6E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000927 944f4bd8c241457edc3d1f631a3990fd 289 Gene3D G3DSA:3.40.190.290 93 287 7.5E-68 T 13-10-2018 VEA_000927 944f4bd8c241457edc3d1f631a3990fd 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 63 2.2E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000927 944f4bd8c241457edc3d1f631a3990fd 289 SUPERFAMILY SSF53850 89 289 5.07E-46 T 13-10-2018 VEA_000927 944f4bd8c241457edc3d1f631a3990fd 289 SUPERFAMILY SSF46785 4 87 1.34E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000152 d851ae93c348ead043348a726adb4286 103 SUPERFAMILY SSF55159 3 99 7.19E-27 T 13-10-2018 IPR036877 SUI1 domain superfamily GO:0003743|GO:0006413 VEA_000152 d851ae93c348ead043348a726adb4286 103 Pfam PF01253 Translation initiation factor SUI1 27 96 1.7E-19 T 13-10-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 VEA_000152 d851ae93c348ead043348a726adb4286 103 PIRSF PIRSF037511 1 103 2.2E-33 T 13-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 VEA_000152 d851ae93c348ead043348a726adb4286 103 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 3 103 3.4E-39 T 13-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 VEA_000152 d851ae93c348ead043348a726adb4286 103 Gene3D G3DSA:3.30.780.10 23 103 2.1E-33 T 13-10-2018 VEA_002410 703c72c1f628616a13609d7a88cd526e 263 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 8 261 9.8E-95 T 13-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria VEA_002410 703c72c1f628616a13609d7a88cd526e 263 Pfam PF02405 Permease MlaE 48 259 2.3E-73 T 13-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 VEA_002661 5742ab76f6eb1db22e4a48c34b8abe31 350 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 187 349 4.5E-65 T 13-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VEA_002661 5742ab76f6eb1db22e4a48c34b8abe31 350 PIRSF PIRSF000808 2 345 2.1E-122 T 13-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VEA_002661 5742ab76f6eb1db22e4a48c34b8abe31 350 SUPERFAMILY SSF54197 6 179 4.68E-73 T 13-10-2018 IPR036265 HIT-like superfamily VEA_002661 5742ab76f6eb1db22e4a48c34b8abe31 350 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 4 349 1.2E-184 T 13-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VEA_002661 5742ab76f6eb1db22e4a48c34b8abe31 350 Gene3D G3DSA:3.30.428.10 178 350 1.8E-70 T 13-10-2018 IPR036265 HIT-like superfamily VEA_002661 5742ab76f6eb1db22e4a48c34b8abe31 350 Gene3D G3DSA:3.30.428.10 46 177 1.3E-54 T 13-10-2018 IPR036265 HIT-like superfamily VEA_002661 5742ab76f6eb1db22e4a48c34b8abe31 350 SUPERFAMILY SSF54197 181 348 4.76E-53 T 13-10-2018 IPR036265 HIT-like superfamily VEA_002661 5742ab76f6eb1db22e4a48c34b8abe31 350 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 153 170 - T 13-10-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VEA_002661 5742ab76f6eb1db22e4a48c34b8abe31 350 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 6 178 2.7E-66 T 13-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VEA_004349 05847a8e6a22e9806182e6e36d9cd231 372 SUPERFAMILY SSF56014 265 354 2.06E-11 T 13-10-2018 VEA_004349 05847a8e6a22e9806182e6e36d9cd231 372 PIRSF PIRSF004640 1 364 2.7E-148 T 13-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 VEA_004349 05847a8e6a22e9806182e6e36d9cd231 372 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 358 35.124 T 13-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 VEA_004349 05847a8e6a22e9806182e6e36d9cd231 372 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 351 1.3E-126 T 13-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 VEA_004349 05847a8e6a22e9806182e6e36d9cd231 372 Pfam PF04551 GcpE protein 14 354 4.5E-132 T 13-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 VEA_004349 05847a8e6a22e9806182e6e36d9cd231 372 Gene3D G3DSA:3.30.413.10 262 361 8.5E-25 T 13-10-2018 VEA_004349 05847a8e6a22e9806182e6e36d9cd231 372 SUPERFAMILY SSF51717 15 207 5.73E-11 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VEA_004349 05847a8e6a22e9806182e6e36d9cd231 372 Gene3D G3DSA:3.20.20.20 1 261 3.5E-104 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VEA_003400 8cec985f16313da5c01c3eeeb89f0ba6 657 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 480 640 6.1E-35 T 13-10-2018 IPR000160 GGDEF domain VEA_003400 8cec985f16313da5c01c3eeeb89f0ba6 657 Gene3D G3DSA:3.30.70.270 476 645 1.9E-38 T 13-10-2018 VEA_003400 8cec985f16313da5c01c3eeeb89f0ba6 657 Gene3D G3DSA:1.25.40.10 295 428 4.0E-10 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_003400 8cec985f16313da5c01c3eeeb89f0ba6 657 SUPERFAMILY SSF48452 194 415 5.12E-21 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_003400 8cec985f16313da5c01c3eeeb89f0ba6 657 Gene3D G3DSA:1.25.40.10 98 294 5.1E-23 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_003400 8cec985f16313da5c01c3eeeb89f0ba6 657 Pfam PF13424 Tetratricopeptide repeat 217 286 1.3E-9 T 13-10-2018 VEA_003400 8cec985f16313da5c01c3eeeb89f0ba6 657 SMART SM00028 375 408 200.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_003400 8cec985f16313da5c01c3eeeb89f0ba6 657 SMART SM00028 488 521 430.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_003400 8cec985f16313da5c01c3eeeb89f0ba6 657 SMART SM00028 255 288 0.0043 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_003400 8cec985f16313da5c01c3eeeb89f0ba6 657 SMART SM00028 335 368 220.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_003400 8cec985f16313da5c01c3eeeb89f0ba6 657 SMART SM00028 295 328 15.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_003400 8cec985f16313da5c01c3eeeb89f0ba6 657 SMART SM00028 215 248 14.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_003400 8cec985f16313da5c01c3eeeb89f0ba6 657 SMART SM00028 178 211 270.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_003400 8cec985f16313da5c01c3eeeb89f0ba6 657 SUPERFAMILY SSF48452 90 205 2.74E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_003400 8cec985f16313da5c01c3eeeb89f0ba6 657 SUPERFAMILY SSF55073 487 640 2.43E-34 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_003400 8cec985f16313da5c01c3eeeb89f0ba6 657 Pfam PF00990 Diguanylate cyclase, GGDEF domain 482 638 3.0E-34 T 13-10-2018 IPR000160 GGDEF domain VEA_003400 8cec985f16313da5c01c3eeeb89f0ba6 657 SMART SM00267 471 643 1.2E-35 T 13-10-2018 IPR000160 GGDEF domain VEA_002950 c4b77ea46cefb4bcfa772ec4a2b88ac8 676 Gene3D G3DSA:4.10.860.10 618 676 1.2E-19 T 13-10-2018 VEA_002950 c4b77ea46cefb4bcfa772ec4a2b88ac8 676 SMART SM00490 461 547 2.9E-19 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_002950 c4b77ea46cefb4bcfa772ec4a2b88ac8 676 SUPERFAMILY SSF46600 625 672 1.57E-10 T 13-10-2018 IPR036876 UVR domain superfamily VEA_002950 c4b77ea46cefb4bcfa772ec4a2b88ac8 676 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 671 42.867 T 13-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 VEA_002950 c4b77ea46cefb4bcfa772ec4a2b88ac8 676 Pfam PF00271 Helicase conserved C-terminal domain 442 545 2.2E-17 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_002950 c4b77ea46cefb4bcfa772ec4a2b88ac8 676 SUPERFAMILY SSF52540 5 416 1.44E-136 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002950 c4b77ea46cefb4bcfa772ec4a2b88ac8 676 Pfam PF04851 Type III restriction enzyme, res subunit 16 129 1.4E-8 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VEA_002950 c4b77ea46cefb4bcfa772ec4a2b88ac8 676 SMART SM00487 9 427 5.3E-27 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEA_002950 c4b77ea46cefb4bcfa772ec4a2b88ac8 676 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 669 0.0 T 13-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 VEA_002950 c4b77ea46cefb4bcfa772ec4a2b88ac8 676 Gene3D G3DSA:3.40.50.300 270 415 3.5E-50 T 13-10-2018 VEA_002950 c4b77ea46cefb4bcfa772ec4a2b88ac8 676 Gene3D G3DSA:3.40.50.300 416 597 2.3E-50 T 13-10-2018 VEA_002950 c4b77ea46cefb4bcfa772ec4a2b88ac8 676 Gene3D G3DSA:3.40.50.300 1 233 3.4E-72 T 13-10-2018 VEA_002950 c4b77ea46cefb4bcfa772ec4a2b88ac8 676 Pfam PF02151 UvrB/uvrC motif 636 671 5.9E-8 T 13-10-2018 IPR001943 UVR domain GO:0005515 VEA_002950 c4b77ea46cefb4bcfa772ec4a2b88ac8 676 Pfam PF12344 Ultra-violet resistance protein B 553 595 2.1E-20 T 13-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain VEA_002950 c4b77ea46cefb4bcfa772ec4a2b88ac8 676 SUPERFAMILY SSF52540 37 584 6.74E-36 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001620 1634859919570dd951bf623aaa6b6774 353 ProSitePatterns PS01016 Glycoprotease family signature. 111 131 - T 13-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 VEA_001620 1634859919570dd951bf623aaa6b6774 353 SUPERFAMILY SSF53067 116 324 1.96E-43 T 13-10-2018 VEA_001620 1634859919570dd951bf623aaa6b6774 353 Gene3D G3DSA:3.30.420.40 144 308 2.4E-130 T 13-10-2018 VEA_001620 1634859919570dd951bf623aaa6b6774 353 Gene3D G3DSA:3.30.420.40 18 330 2.4E-130 T 13-10-2018 VEA_001620 1634859919570dd951bf623aaa6b6774 353 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 146 158 8.8E-50 T 13-10-2018 IPR017861 Kae1/TsaD family VEA_001620 1634859919570dd951bf623aaa6b6774 353 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 19 32 8.8E-50 T 13-10-2018 IPR017861 Kae1/TsaD family VEA_001620 1634859919570dd951bf623aaa6b6774 353 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 91 111 8.8E-50 T 13-10-2018 IPR017861 Kae1/TsaD family VEA_001620 1634859919570dd951bf623aaa6b6774 353 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 278 287 8.8E-50 T 13-10-2018 IPR017861 Kae1/TsaD family VEA_001620 1634859919570dd951bf623aaa6b6774 353 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 169 190 8.8E-50 T 13-10-2018 IPR017861 Kae1/TsaD family VEA_001620 1634859919570dd951bf623aaa6b6774 353 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 112 131 8.8E-50 T 13-10-2018 IPR017861 Kae1/TsaD family VEA_001620 1634859919570dd951bf623aaa6b6774 353 SUPERFAMILY SSF53067 18 138 1.17E-30 T 13-10-2018 VEA_001620 1634859919570dd951bf623aaa6b6774 353 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 20 321 2.5E-122 T 13-10-2018 IPR017861 Kae1/TsaD family VEA_001620 1634859919570dd951bf623aaa6b6774 353 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 16 346 63.194 T 13-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 VEA_001620 1634859919570dd951bf623aaa6b6774 353 Pfam PF00814 Glycoprotease family 39 322 1.9E-101 T 13-10-2018 IPR000905 Gcp-like domain VEA_001620 1634859919570dd951bf623aaa6b6774 353 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 18 328 1.0E-133 T 13-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 VEA_004397 b4fbf7007f8660cbd2c2d0e6c7dbc2da 108 Gene3D G3DSA:3.30.160.100 1 105 4.6E-33 T 13-10-2018 IPR036567 Ribosome hibernation promotion factor-like VEA_004397 b4fbf7007f8660cbd2c2d0e6c7dbc2da 108 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 92 7.3E-23 T 13-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 VEA_004397 b4fbf7007f8660cbd2c2d0e6c7dbc2da 108 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 99 2.4E-30 T 13-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 VEA_004397 b4fbf7007f8660cbd2c2d0e6c7dbc2da 108 SUPERFAMILY SSF69754 1 103 4.19E-29 T 13-10-2018 IPR036567 Ribosome hibernation promotion factor-like VEA_002412 3683384f9553abe0ae2244f9cf0914e7 212 PIRSF PIRSF004649 1 212 9.6E-60 T 13-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC VEA_002412 3683384f9553abe0ae2244f9cf0914e7 212 Pfam PF05494 MlaC protein 33 200 8.1E-47 T 13-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC VEA_002412 3683384f9553abe0ae2244f9cf0914e7 212 Gene3D G3DSA:3.10.450.710 25 204 9.0E-39 T 13-10-2018 VEA_001399 7bf8bab3b1179accced1474488c2cd75 1387 Gene3D G3DSA:3.50.50.60 156 272 5.8E-34 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_001399 7bf8bab3b1179accced1474488c2cd75 1387 Pfam PF01568 Molydopterin dinucleotide binding domain 1260 1364 3.2E-29 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VEA_001399 7bf8bab3b1179accced1474488c2cd75 1387 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 1123 1140 - T 13-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 VEA_001399 7bf8bab3b1179accced1474488c2cd75 1387 Gene3D G3DSA:3.30.70.20 584 682 2.4E-16 T 13-10-2018 VEA_001399 7bf8bab3b1179accced1474488c2cd75 1387 Pfam PF00037 4Fe-4S binding domain 662 679 2.3E-5 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEA_001399 7bf8bab3b1179accced1474488c2cd75 1387 Pfam PF00037 4Fe-4S binding domain 598 619 1.3E-4 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEA_001399 7bf8bab3b1179accced1474488c2cd75 1387 Gene3D G3DSA:3.50.50.60 273 371 1.3E-20 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_001399 7bf8bab3b1179accced1474488c2cd75 1387 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 694 747 2.0E-16 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEA_001399 7bf8bab3b1179accced1474488c2cd75 1387 SMART SM00926 693 748 2.7E-18 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEA_001399 7bf8bab3b1179accced1474488c2cd75 1387 SUPERFAMILY SSF54862 532 683 1.17E-18 T 13-10-2018 VEA_001399 7bf8bab3b1179accced1474488c2cd75 1387 SUPERFAMILY SSF54292 6 63 4.11E-11 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VEA_001399 7bf8bab3b1179accced1474488c2cd75 1387 Pfam PF00384 Molybdopterin oxidoreductase 751 1177 4.1E-91 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEA_001399 7bf8bab3b1179accced1474488c2cd75 1387 Gene3D G3DSA:3.50.50.60 378 468 2.3E-6 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_001399 7bf8bab3b1179accced1474488c2cd75 1387 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 157 453 8.3E-33 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VEA_001399 7bf8bab3b1179accced1474488c2cd75 1387 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 664 675 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VEA_001399 7bf8bab3b1179accced1474488c2cd75 1387 PRINTS PR00419 Adrenodoxin reductase family signature 288 302 6.0E-15 T 13-10-2018 VEA_001399 7bf8bab3b1179accced1474488c2cd75 1387 PRINTS PR00419 Adrenodoxin reductase family signature 157 179 6.0E-15 T 13-10-2018 VEA_001399 7bf8bab3b1179accced1474488c2cd75 1387 PRINTS PR00419 Adrenodoxin reductase family signature 180 193 6.0E-15 T 13-10-2018 VEA_001399 7bf8bab3b1179accced1474488c2cd75 1387 Gene3D G3DSA:1.10.1060.10 23 155 3.6E-25 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VEA_001399 7bf8bab3b1179accced1474488c2cd75 1387 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 698 1368 5.4E-249 T 13-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 VEA_001399 7bf8bab3b1179accced1474488c2cd75 1387 SUPERFAMILY SSF46548 53 165 1.46E-17 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VEA_001399 7bf8bab3b1179accced1474488c2cd75 1387 Gene3D G3DSA:2.40.40.20 1250 1370 2.1E-40 T 13-10-2018 VEA_001399 7bf8bab3b1179accced1474488c2cd75 1387 SUPERFAMILY SSF51971 155 395 3.0E-62 T 13-10-2018 VEA_001399 7bf8bab3b1179accced1474488c2cd75 1387 Gene3D G3DSA:3.40.228.10 829 1030 4.6E-179 T 13-10-2018 VEA_001399 7bf8bab3b1179accced1474488c2cd75 1387 SUPERFAMILY SSF50692 1228 1369 5.65E-40 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VEA_001399 7bf8bab3b1179accced1474488c2cd75 1387 Gene3D G3DSA:2.20.25.90 693 748 4.4E-20 T 13-10-2018 VEA_001399 7bf8bab3b1179accced1474488c2cd75 1387 Gene3D G3DSA:3.40.50.740 756 1218 4.6E-179 T 13-10-2018 VEA_001399 7bf8bab3b1179accced1474488c2cd75 1387 SUPERFAMILY SSF53706 689 1226 9.42E-206 T 13-10-2018 VEA_001399 7bf8bab3b1179accced1474488c2cd75 1387 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 61 140 2.7E-18 T 13-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 VEA_001399 7bf8bab3b1179accced1474488c2cd75 1387 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 698 715 - T 13-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 VEA_000725 2782684f598229d6891af18d924a08fe 87 Pfam PF11216 Protein of unknown function (DUF3012) 56 87 4.7E-20 T 13-10-2018 IPR021379 Protein of unknown function DUF3012 VEA_000725 2782684f598229d6891af18d924a08fe 87 Pfam PF11216 Protein of unknown function (DUF3012) 21 52 3.1E-19 T 13-10-2018 IPR021379 Protein of unknown function DUF3012 VEA_001951 292c82429ef2ea3ef658a1d59eb3f6bf 154 SMART SM00344 8 115 5.0E-40 T 13-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VEA_001951 292c82429ef2ea3ef658a1d59eb3f6bf 154 Pfam PF01037 Lrp/AsnC ligand binding domain 75 145 1.4E-16 T 13-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VEA_001951 292c82429ef2ea3ef658a1d59eb3f6bf 154 Gene3D G3DSA:1.10.10.10 6 59 2.6E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001951 292c82429ef2ea3ef658a1d59eb3f6bf 154 SUPERFAMILY SSF54909 69 153 5.36E-19 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel VEA_001951 292c82429ef2ea3ef658a1d59eb3f6bf 154 SUPERFAMILY SSF46785 7 68 2.03E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_001951 292c82429ef2ea3ef658a1d59eb3f6bf 154 Gene3D G3DSA:3.30.70.920 60 142 1.9E-31 T 13-10-2018 VEA_001951 292c82429ef2ea3ef658a1d59eb3f6bf 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 1.3E-9 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEA_001951 292c82429ef2ea3ef658a1d59eb3f6bf 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 1.3E-9 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEA_001951 292c82429ef2ea3ef658a1d59eb3f6bf 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 1.3E-9 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEA_001951 292c82429ef2ea3ef658a1d59eb3f6bf 154 Pfam PF13404 AsnC-type helix-turn-helix domain 8 49 6.0E-14 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEA_004377 060e7b35532c9734cad847cde9dc1842 232 Gene3D G3DSA:1.20.58.220 118 230 1.6E-34 T 13-10-2018 IPR038078 PhoU-like domain superfamily VEA_004377 060e7b35532c9734cad847cde9dc1842 232 PIRSF PIRSF003107 4 223 4.6E-70 T 13-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 VEA_004377 060e7b35532c9734cad847cde9dc1842 232 SUPERFAMILY SSF109755 10 225 9.84E-70 T 13-10-2018 VEA_004377 060e7b35532c9734cad847cde9dc1842 232 Gene3D G3DSA:1.20.58.220 2 117 5.5E-41 T 13-10-2018 IPR038078 PhoU-like domain superfamily VEA_004377 060e7b35532c9734cad847cde9dc1842 232 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 10 219 1.4E-75 T 13-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 VEA_004377 060e7b35532c9734cad847cde9dc1842 232 Pfam PF01895 PhoU domain 128 210 1.2E-16 T 13-10-2018 IPR026022 PhoU domain VEA_004377 060e7b35532c9734cad847cde9dc1842 232 Pfam PF01895 PhoU domain 23 108 3.2E-23 T 13-10-2018 IPR026022 PhoU domain VEA_002923 a384f5762477af838297727165ac688f 75 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 23.597 T 13-10-2018 IPR009857 Uncharacterised protein family UPF0352 VEA_002923 a384f5762477af838297727165ac688f 75 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 1.0E-31 T 13-10-2018 IPR009857 Uncharacterised protein family UPF0352 VEA_002923 a384f5762477af838297727165ac688f 75 PIRSF PIRSF006188 1 72 2.6E-37 T 13-10-2018 IPR009857 Uncharacterised protein family UPF0352 VEA_002923 a384f5762477af838297727165ac688f 75 Gene3D G3DSA:1.10.3390.10 1 75 3.8E-33 T 13-10-2018 IPR023202 YejL-like superfamily VEA_002923 a384f5762477af838297727165ac688f 75 SUPERFAMILY SSF158651 1 75 2.88E-29 T 13-10-2018 IPR023202 YejL-like superfamily VEA_002923 a384f5762477af838297727165ac688f 75 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 7.3E-20 T 13-10-2018 IPR009857 Uncharacterised protein family UPF0352 VEA_004207 516c39be56632c74104053a9d6b7e106 314 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 13-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 VEA_004207 516c39be56632c74104053a9d6b7e106 314 SMART SM01400 4 121 2.0E-77 T 13-10-2018 VEA_004207 516c39be56632c74104053a9d6b7e106 314 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 4 314 49.807 T 13-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 VEA_004207 516c39be56632c74104053a9d6b7e106 314 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 3.3E-125 T 13-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 VEA_004207 516c39be56632c74104053a9d6b7e106 314 Gene3D G3DSA:3.40.50.2020 7 302 9.3E-136 T 13-10-2018 VEA_004207 516c39be56632c74104053a9d6b7e106 314 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 1.9E-31 T 13-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 VEA_004207 516c39be56632c74104053a9d6b7e106 314 SUPERFAMILY SSF53271 69 306 2.91E-67 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like VEA_004207 516c39be56632c74104053a9d6b7e106 314 Gene3D G3DSA:3.40.50.2020 148 290 9.3E-136 T 13-10-2018 VEA_004207 516c39be56632c74104053a9d6b7e106 314 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 1.4E-50 T 13-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 VEA_002264 0260e31cb804f806f6e221098c4805ed 438 Gene3D G3DSA:1.10.300.10 102 201 1.9E-107 T 13-10-2018 VEA_002264 0260e31cb804f806f6e221098c4805ed 438 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 13-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VEA_002264 0260e31cb804f806f6e221098c4805ed 438 SUPERFAMILY SSF52540 3 436 1.05E-179 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002264 0260e31cb804f806f6e221098c4805ed 438 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 438 220.247 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VEA_002264 0260e31cb804f806f6e221098c4805ed 438 SMART SM00788 4 431 0.0 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VEA_002264 0260e31cb804f806f6e221098c4805ed 438 Gene3D G3DSA:3.40.440.10 6 249 1.9E-107 T 13-10-2018 VEA_002264 0260e31cb804f806f6e221098c4805ed 438 Pfam PF00709 Adenylosuccinate synthetase 5 430 6.5E-179 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VEA_002264 0260e31cb804f806f6e221098c4805ed 438 Gene3D G3DSA:3.90.170.10 267 438 3.8E-67 T 13-10-2018 VEA_002264 0260e31cb804f806f6e221098c4805ed 438 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 431 2.5E-192 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VEA_002264 0260e31cb804f806f6e221098c4805ed 438 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 13-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VEA_000805 9cfc7810b9c6405d95a126b2adf08b7f 466 ProSitePatterns PS00853 Beta-eliminating lyases pyridoxal-phosphate attachment site. 255 273 - T 13-10-2018 IPR018176 Tryptophanase, conserved site KEGG: 00380+4.1.99.1 VEA_000805 9cfc7810b9c6405d95a126b2adf08b7f 466 Pfam PF01212 Beta-eliminating lyase 46 431 2.3E-98 T 13-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 VEA_000805 9cfc7810b9c6405d95a126b2adf08b7f 466 Gene3D G3DSA:3.90.1150.10 6 460 6.9E-209 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEA_000805 9cfc7810b9c6405d95a126b2adf08b7f 466 SUPERFAMILY SSF53383 2 465 2.6E-145 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_000805 9cfc7810b9c6405d95a126b2adf08b7f 466 Hamap MF_00544 Tryptophanase [tnaA]. 1 465 106.663 T 13-10-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 VEA_000805 9cfc7810b9c6405d95a126b2adf08b7f 466 PIRSF PIRSF001386 1 466 9.8E-229 T 13-10-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 VEA_000805 9cfc7810b9c6405d95a126b2adf08b7f 466 Gene3D G3DSA:3.40.640.10 58 326 6.9E-209 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_000324 d704a5a467dd4b4a969c04afe78e6c83 5123 PRINTS PR00313 NodO calcium binding signature 4993 5001 7.4E-5 T 13-10-2018 VEA_000324 d704a5a467dd4b4a969c04afe78e6c83 5123 PRINTS PR00313 NodO calcium binding signature 4981 4992 7.4E-5 T 13-10-2018 VEA_000324 d704a5a467dd4b4a969c04afe78e6c83 5123 PRINTS PR00313 NodO calcium binding signature 5011 5020 7.4E-5 T 13-10-2018 VEA_000324 d704a5a467dd4b4a969c04afe78e6c83 5123 PRINTS PR00313 NodO calcium binding signature 5002 5010 7.4E-5 T 13-10-2018 VEA_000324 d704a5a467dd4b4a969c04afe78e6c83 5123 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 4998 5016 - T 13-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VEA_000324 d704a5a467dd4b4a969c04afe78e6c83 5123 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 995 1080 0.0011 T 13-10-2018 IPR010221 VCBS repeat VEA_000324 d704a5a467dd4b4a969c04afe78e6c83 5123 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 506 665 3.0E-27 T 13-10-2018 IPR019959 T1SS-143 repeat-containing domain VEA_000324 d704a5a467dd4b4a969c04afe78e6c83 5123 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2560 2705 7.9E-43 T 13-10-2018 IPR019959 T1SS-143 repeat-containing domain VEA_000324 d704a5a467dd4b4a969c04afe78e6c83 5123 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1670 1807 1.3E-54 T 13-10-2018 IPR019959 T1SS-143 repeat-containing domain VEA_000324 d704a5a467dd4b4a969c04afe78e6c83 5123 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1382 1520 4.2E-55 T 13-10-2018 IPR019959 T1SS-143 repeat-containing domain VEA_000324 d704a5a467dd4b4a969c04afe78e6c83 5123 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 667 806 6.1E-52 T 13-10-2018 IPR019959 T1SS-143 repeat-containing domain VEA_000324 d704a5a467dd4b4a969c04afe78e6c83 5123 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1239 1379 9.2E-54 T 13-10-2018 IPR019959 T1SS-143 repeat-containing domain VEA_000324 d704a5a467dd4b4a969c04afe78e6c83 5123 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2407 2554 3.9E-46 T 13-10-2018 IPR019959 T1SS-143 repeat-containing domain VEA_000324 d704a5a467dd4b4a969c04afe78e6c83 5123 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2258 2399 4.8E-40 T 13-10-2018 IPR019959 T1SS-143 repeat-containing domain VEA_000324 d704a5a467dd4b4a969c04afe78e6c83 5123 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1810 1951 3.8E-53 T 13-10-2018 IPR019959 T1SS-143 repeat-containing domain VEA_000324 d704a5a467dd4b4a969c04afe78e6c83 5123 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2109 2256 1.2E-46 T 13-10-2018 IPR019959 T1SS-143 repeat-containing domain VEA_000324 d704a5a467dd4b4a969c04afe78e6c83 5123 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1525 1666 1.5E-54 T 13-10-2018 IPR019959 T1SS-143 repeat-containing domain VEA_000324 d704a5a467dd4b4a969c04afe78e6c83 5123 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 953 1093 2.6E-57 T 13-10-2018 IPR019959 T1SS-143 repeat-containing domain VEA_000324 d704a5a467dd4b4a969c04afe78e6c83 5123 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1956 2102 1.6E-41 T 13-10-2018 IPR019959 T1SS-143 repeat-containing domain VEA_000324 d704a5a467dd4b4a969c04afe78e6c83 5123 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 810 950 1.8E-53 T 13-10-2018 IPR019959 T1SS-143 repeat-containing domain VEA_000324 d704a5a467dd4b4a969c04afe78e6c83 5123 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1096 1230 1.7E-55 T 13-10-2018 IPR019959 T1SS-143 repeat-containing domain VEA_000324 d704a5a467dd4b4a969c04afe78e6c83 5123 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2710 2838 8.6E-48 T 13-10-2018 IPR019959 T1SS-143 repeat-containing domain VEA_000324 d704a5a467dd4b4a969c04afe78e6c83 5123 Gene3D G3DSA:2.150.10.10 4972 5101 5.9E-17 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VEA_000324 d704a5a467dd4b4a969c04afe78e6c83 5123 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 4989 5007 - T 13-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VEA_000324 d704a5a467dd4b4a969c04afe78e6c83 5123 SUPERFAMILY SSF51120 4941 5059 9.81E-17 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VEA_000324 d704a5a467dd4b4a969c04afe78e6c83 5123 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 5031 5120 1.0E-13 T 13-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass VEA_003904 f2eecbd72c0b795c3685476c431eeac1 806 SUPERFAMILY SSF55874 406 579 3.01E-43 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_003904 f2eecbd72c0b795c3685476c431eeac1 806 Gene3D G3DSA:3.30.450.20 30 204 1.1E-22 T 13-10-2018 VEA_003904 f2eecbd72c0b795c3685476c431eeac1 806 Gene3D G3DSA:1.10.287.130 319 415 1.7E-25 T 13-10-2018 VEA_003904 f2eecbd72c0b795c3685476c431eeac1 806 SUPERFAMILY SSF52172 596 724 4.13E-27 T 13-10-2018 IPR011006 CheY-like superfamily VEA_003904 f2eecbd72c0b795c3685476c431eeac1 806 SMART SM00388 352 417 1.7E-23 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_003904 f2eecbd72c0b795c3685476c431eeac1 806 Pfam PF00512 His Kinase A (phospho-acceptor) domain 353 417 6.1E-18 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_003904 f2eecbd72c0b795c3685476c431eeac1 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 518 7.7E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_003904 f2eecbd72c0b795c3685476c431eeac1 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 532 7.7E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_003904 f2eecbd72c0b795c3685476c431eeac1 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 539 557 7.7E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_003904 f2eecbd72c0b795c3685476c431eeac1 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 576 7.7E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_003904 f2eecbd72c0b795c3685476c431eeac1 806 SUPERFAMILY SSF47384 338 418 7.85E-19 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEA_003904 f2eecbd72c0b795c3685476c431eeac1 806 SMART SM00448 598 712 1.1E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_003904 f2eecbd72c0b795c3685476c431eeac1 806 Pfam PF02743 Cache domain 125 229 3.4E-12 T 13-10-2018 IPR033479 Double Cache domain 1 VEA_003904 f2eecbd72c0b795c3685476c431eeac1 806 Pfam PF00072 Response regulator receiver domain 601 712 1.4E-18 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_003904 f2eecbd72c0b795c3685476c431eeac1 806 SMART SM00387 464 579 5.7E-39 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_003904 f2eecbd72c0b795c3685476c431eeac1 806 Gene3D G3DSA:3.30.565.10 416 580 1.7E-46 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_003904 f2eecbd72c0b795c3685476c431eeac1 806 Gene3D G3DSA:3.40.50.2300 586 717 5.4E-30 T 13-10-2018 VEA_003904 f2eecbd72c0b795c3685476c431eeac1 806 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 464 577 1.3E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_000242 ba593e41a6a4ba317ef6e6b029f5f275 586 SMART SM00382 371 557 1.8E-18 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_000242 ba593e41a6a4ba317ef6e6b029f5f275 586 TIGRFAM TIGR02204 MsbA_rel: ABC transporter, permease/ATP-binding protein 7 582 1.2E-281 T 13-10-2018 IPR011918 ABC transporter, ATP-binding/permease protein VEA_000242 ba593e41a6a4ba317ef6e6b029f5f275 586 SUPERFAMILY SSF90123 14 326 1.1E-74 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEA_000242 ba593e41a6a4ba317ef6e6b029f5f275 586 SUPERFAMILY SSF52540 336 582 2.07E-92 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000242 ba593e41a6a4ba317ef6e6b029f5f275 586 Gene3D G3DSA:3.40.50.300 337 585 8.0E-95 T 13-10-2018 VEA_000242 ba593e41a6a4ba317ef6e6b029f5f275 586 ProSitePatterns PS00211 ABC transporters family signature. 483 497 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_000242 ba593e41a6a4ba317ef6e6b029f5f275 586 Gene3D G3DSA:1.20.1560.10 9 330 1.7E-83 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEA_000242 ba593e41a6a4ba317ef6e6b029f5f275 586 Pfam PF00664 ABC transporter transmembrane region 29 291 1.5E-50 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VEA_000242 ba593e41a6a4ba317ef6e6b029f5f275 586 Pfam PF00005 ABC transporter 363 511 2.6E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_003737 659f493238a74dde767568fff5ce4dae 562 PRINTS PR00072 Malic enzyme signature 144 173 2.6E-72 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VEA_003737 659f493238a74dde767568fff5ce4dae 562 PRINTS PR00072 Malic enzyme signature 180 202 2.6E-72 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VEA_003737 659f493238a74dde767568fff5ce4dae 562 PRINTS PR00072 Malic enzyme signature 84 108 2.6E-72 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VEA_003737 659f493238a74dde767568fff5ce4dae 562 PRINTS PR00072 Malic enzyme signature 405 421 2.6E-72 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VEA_003737 659f493238a74dde767568fff5ce4dae 562 PRINTS PR00072 Malic enzyme signature 264 280 2.6E-72 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VEA_003737 659f493238a74dde767568fff5ce4dae 562 PRINTS PR00072 Malic enzyme signature 295 311 2.6E-72 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VEA_003737 659f493238a74dde767568fff5ce4dae 562 PRINTS PR00072 Malic enzyme signature 239 257 2.6E-72 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VEA_003737 659f493238a74dde767568fff5ce4dae 562 SUPERFAMILY SSF51735 268 559 7.13E-96 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_003737 659f493238a74dde767568fff5ce4dae 562 SMART SM01274 78 258 6.6E-108 T 13-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VEA_003737 659f493238a74dde767568fff5ce4dae 562 Gene3D G3DSA:3.40.50.10380 13 265 2.4E-115 T 13-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 VEA_003737 659f493238a74dde767568fff5ce4dae 562 SMART SM00919 268 528 2.7E-134 T 13-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 VEA_003737 659f493238a74dde767568fff5ce4dae 562 Gene3D G3DSA:3.40.50.720 266 562 2.2E-110 T 13-10-2018 VEA_003737 659f493238a74dde767568fff5ce4dae 562 SUPERFAMILY SSF53223 4 267 7.91E-110 T 13-10-2018 VEA_003737 659f493238a74dde767568fff5ce4dae 562 ProSitePatterns PS00331 Malic enzymes signature. 264 280 - T 13-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 VEA_003737 659f493238a74dde767568fff5ce4dae 562 PIRSF PIRSF000106 2 560 6.0E-226 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VEA_003737 659f493238a74dde767568fff5ce4dae 562 Pfam PF00390 Malic enzyme, N-terminal domain 78 258 5.6E-78 T 13-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VEA_003737 659f493238a74dde767568fff5ce4dae 562 Pfam PF03949 Malic enzyme, NAD binding domain 268 528 3.4E-104 T 13-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 VEA_003737 659f493238a74dde767568fff5ce4dae 562 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 1 562 73.106 T 13-10-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38|MetaCyc: PWY-6339 VEA_002252 fb6196f9b885d83383e66b2230154dce 181 Gene3D G3DSA:3.30.420.10 1 181 1.4E-75 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VEA_002252 fb6196f9b885d83383e66b2230154dce 181 SUPERFAMILY SSF53098 1 180 4.91E-50 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VEA_002252 fb6196f9b885d83383e66b2230154dce 181 SMART SM00479 7 180 8.6E-22 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VEA_002252 fb6196f9b885d83383e66b2230154dce 181 Pfam PF00929 Exonuclease 9 170 1.1E-37 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VEA_002252 fb6196f9b885d83383e66b2230154dce 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 43.91 T 13-10-2018 IPR022894 Oligoribonuclease GO:0000175 VEA_003640 27b05b46c1282bfe9c70f2b681722a0f 199 SUPERFAMILY SSF51161 4 189 3.6E-51 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily VEA_003640 27b05b46c1282bfe9c70f2b681722a0f 199 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 125 159 2.0E-13 T 13-10-2018 IPR001451 Hexapeptide repeat VEA_003640 27b05b46c1282bfe9c70f2b681722a0f 199 Pfam PF12464 Maltose acetyltransferase 6 52 4.6E-13 T 13-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 VEA_003640 27b05b46c1282bfe9c70f2b681722a0f 199 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 133 161 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VEA_003640 27b05b46c1282bfe9c70f2b681722a0f 199 SMART SM01266 3 53 3.4E-12 T 13-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 VEA_003640 27b05b46c1282bfe9c70f2b681722a0f 199 Gene3D G3DSA:2.160.10.10 1 196 1.9E-65 T 13-10-2018 VEA_002884 593f00ccd87e4ab73491125443ad9f2b 181 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 9 178 38.051 T 13-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 VEA_002884 593f00ccd87e4ab73491125443ad9f2b 181 Pfam PF00156 Phosphoribosyl transferase domain 30 155 2.1E-15 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VEA_002884 593f00ccd87e4ab73491125443ad9f2b 181 SUPERFAMILY SSF53271 11 178 3.9E-53 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like VEA_002884 593f00ccd87e4ab73491125443ad9f2b 181 Gene3D G3DSA:3.40.50.2020 1 181 5.7E-67 T 13-10-2018 VEA_002884 593f00ccd87e4ab73491125443ad9f2b 181 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 9 177 1.0E-72 T 13-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 VEA_004094 7d2cb39c33da3a933f14e063d9ce0824 233 Gene3D G3DSA:3.30.420.40 96 190 4.1E-84 T 13-10-2018 VEA_004094 7d2cb39c33da3a933f14e063d9ce0824 233 SUPERFAMILY SSF53067 112 219 5.7E-28 T 13-10-2018 VEA_004094 7d2cb39c33da3a933f14e063d9ce0824 233 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 221 1.8E-67 T 13-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 VEA_004094 7d2cb39c33da3a933f14e063d9ce0824 233 SUPERFAMILY SSF53067 4 106 2.12E-31 T 13-10-2018 VEA_004094 7d2cb39c33da3a933f14e063d9ce0824 233 Pfam PF00814 Glycoprotease family 31 226 2.0E-31 T 13-10-2018 IPR000905 Gcp-like domain VEA_004094 7d2cb39c33da3a933f14e063d9ce0824 233 Gene3D G3DSA:3.30.420.40 5 202 4.1E-84 T 13-10-2018 VEA_003655 23ac256c8a46824f75fb2345da978050 357 PIRSF PIRSF009283 1 355 9.4E-125 T 13-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 VEA_003655 23ac256c8a46824f75fb2345da978050 357 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 163 275 4.2E-14 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VEA_003655 23ac256c8a46824f75fb2345da978050 357 SUPERFAMILY SSF54593 5 341 8.31E-79 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEA_003655 23ac256c8a46824f75fb2345da978050 357 Gene3D G3DSA:3.10.180.10 3 154 6.8E-46 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEA_003655 23ac256c8a46824f75fb2345da978050 357 Gene3D G3DSA:3.10.180.10 158 355 3.3E-70 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEA_003655 23ac256c8a46824f75fb2345da978050 357 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 12 354 2.6E-131 T 13-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 VEA_003655 23ac256c8a46824f75fb2345da978050 357 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 6 143 5.9E-56 T 13-10-2018 VEA_002238 7a689500f8e3092648310707db6c63c1 323 Pfam PF00152 tRNA synthetases class II (D, K and N) 13 319 8.7E-45 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEA_002238 7a689500f8e3092648310707db6c63c1 323 SUPERFAMILY SSF55681 10 320 2.95E-80 T 13-10-2018 VEA_002238 7a689500f8e3092648310707db6c63c1 323 Gene3D G3DSA:3.30.930.10 1 322 8.6E-110 T 13-10-2018 VEA_002238 7a689500f8e3092648310707db6c63c1 323 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 14 318 9.1E-128 T 13-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 VEA_002238 7a689500f8e3092648310707db6c63c1 323 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 1 323 53.254 T 13-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 VEA_002712 4fda03718f7a39e98865223ed0a15301 407 Gene3D G3DSA:3.40.50.80 275 393 3.6E-30 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VEA_002712 4fda03718f7a39e98865223ed0a15301 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 276 295 5.1E-6 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEA_002712 4fda03718f7a39e98865223ed0a15301 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 242 251 5.1E-6 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEA_002712 4fda03718f7a39e98865223ed0a15301 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 302 311 5.1E-6 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEA_002712 4fda03718f7a39e98865223ed0a15301 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 209 216 5.1E-6 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEA_002712 4fda03718f7a39e98865223ed0a15301 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 373 381 5.1E-6 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEA_002712 4fda03718f7a39e98865223ed0a15301 407 SUPERFAMILY SSF52343 258 402 4.32E-35 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VEA_002712 4fda03718f7a39e98865223ed0a15301 407 Pfam PF00970 Oxidoreductase FAD-binding domain 204 266 9.4E-9 T 13-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VEA_002712 4fda03718f7a39e98865223ed0a15301 407 Pfam PF00175 Oxidoreductase NAD-binding domain 277 385 3.1E-16 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VEA_002712 4fda03718f7a39e98865223ed0a15301 407 Gene3D G3DSA:3.10.20.30 34 125 1.4E-31 T 13-10-2018 IPR012675 Beta-grasp domain superfamily VEA_002712 4fda03718f7a39e98865223ed0a15301 407 PIRSF PIRSF000044 1 407 8.3E-219 T 13-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 VEA_002712 4fda03718f7a39e98865223ed0a15301 407 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 42 115 2.4E-10 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VEA_002712 4fda03718f7a39e98865223ed0a15301 407 SUPERFAMILY SSF54292 35 124 2.42E-21 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VEA_002712 4fda03718f7a39e98865223ed0a15301 407 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 1 407 62.814 T 13-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 VEA_002712 4fda03718f7a39e98865223ed0a15301 407 SUPERFAMILY SSF63380 105 272 6.81E-36 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VEA_002712 4fda03718f7a39e98865223ed0a15301 407 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 3 407 3.9E-228 T 13-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 VEA_002712 4fda03718f7a39e98865223ed0a15301 407 Gene3D G3DSA:2.40.30.10 126 264 1.9E-53 T 13-10-2018 VEA_001269 e8b3579fe9122f20d3c3b918c1094691 334 SUPERFAMILY SSF53300 94 293 4.6E-39 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VEA_001269 e8b3579fe9122f20d3c3b918c1094691 334 Gene3D G3DSA:3.40.50.410 96 297 2.7E-59 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VEA_001269 e8b3579fe9122f20d3c3b918c1094691 334 SMART SM00327 96 297 1.6E-19 T 13-10-2018 IPR002035 von Willebrand factor, type A VEA_001269 e8b3579fe9122f20d3c3b918c1094691 334 Pfam PF00092 von Willebrand factor type A domain 98 290 2.7E-31 T 13-10-2018 IPR002035 von Willebrand factor, type A VEA_002282 ad16df87eb3767e80e342ccdfdf8a469 335 Gene3D G3DSA:3.40.50.1820 30 313 5.2E-26 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_002282 ad16df87eb3767e80e342ccdfdf8a469 335 PIRSF PIRSF005211 1 335 6.7E-104 T 13-10-2018 IPR012020 AB hydrolase 4 family VEA_002282 ad16df87eb3767e80e342ccdfdf8a469 335 SUPERFAMILY SSF53474 32 299 3.75E-40 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_002282 ad16df87eb3767e80e342ccdfdf8a469 335 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 227 268 - T 13-10-2018 IPR000952 AB hydrolase 4, conserved site VEA_002282 ad16df87eb3767e80e342ccdfdf8a469 335 Pfam PF00561 alpha/beta hydrolase fold 61 301 1.7E-20 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEA_000635 1088474159e36f64d92315a39bf6e73d 159 Gene3D G3DSA:3.30.70.920 54 150 6.0E-19 T 13-10-2018 VEA_000635 1088474159e36f64d92315a39bf6e73d 159 SUPERFAMILY SSF54909 66 147 1.61E-17 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel VEA_000635 1088474159e36f64d92315a39bf6e73d 159 Gene3D G3DSA:1.10.10.10 4 53 5.7E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000635 1088474159e36f64d92315a39bf6e73d 159 SUPERFAMILY SSF46785 2 59 2.54E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000635 1088474159e36f64d92315a39bf6e73d 159 SMART SM00344 3 112 6.9E-37 T 13-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VEA_000635 1088474159e36f64d92315a39bf6e73d 159 Pfam PF01037 Lrp/AsnC ligand binding domain 69 143 7.4E-19 T 13-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VEA_000635 1088474159e36f64d92315a39bf6e73d 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 3.0E-14 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEA_000635 1088474159e36f64d92315a39bf6e73d 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 3.0E-14 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEA_000635 1088474159e36f64d92315a39bf6e73d 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 3.0E-14 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEA_000635 1088474159e36f64d92315a39bf6e73d 159 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 2.9E-18 T 13-10-2018 VEA_003582 b2b386bfe1a6ea11bed6e3c73c4c69f9 405 Pfam PF01966 HD domain 168 289 2.5E-13 T 13-10-2018 IPR006674 HD domain VEA_003582 b2b386bfe1a6ea11bed6e3c73c4c69f9 405 Pfam PF11871 Domain of unknown function (DUF3391) 9 136 5.7E-17 T 13-10-2018 IPR021812 Protein of unknown function DUF3391 VEA_003582 b2b386bfe1a6ea11bed6e3c73c4c69f9 405 SUPERFAMILY SSF109604 158 329 1.21E-30 T 13-10-2018 VEA_003582 b2b386bfe1a6ea11bed6e3c73c4c69f9 405 SMART SM00471 163 299 2.2E-9 T 13-10-2018 IPR003607 HD/PDEase domain VEA_003582 b2b386bfe1a6ea11bed6e3c73c4c69f9 405 Gene3D G3DSA:1.10.3210.10 14 329 5.8E-69 T 13-10-2018 VEA_001002 110537a0a477753160757f1108564e88 283 Gene3D G3DSA:1.10.10.10 1 76 6.5E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001002 110537a0a477753160757f1108564e88 283 Gene3D G3DSA:3.40.50.10490 97 279 5.2E-39 T 13-10-2018 VEA_001002 110537a0a477753160757f1108564e88 283 Pfam PF01380 SIS domain 129 257 1.8E-16 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VEA_001002 110537a0a477753160757f1108564e88 283 SUPERFAMILY SSF53697 104 277 1.7E-37 T 13-10-2018 VEA_001002 110537a0a477753160757f1108564e88 283 SUPERFAMILY SSF46689 2 77 4.48E-17 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_001002 110537a0a477753160757f1108564e88 283 Pfam PF01418 Helix-turn-helix domain, rpiR family 3 74 3.0E-18 T 13-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VEA_002955 b067d467bccb5040ceebe954275e9998 170 SMART SM00852 14 158 2.4E-29 T 13-10-2018 IPR001453 MoaB/Mog domain VEA_002955 b067d467bccb5040ceebe954275e9998 170 Pfam PF00994 Probable molybdopterin binding domain 14 156 9.9E-36 T 13-10-2018 IPR001453 MoaB/Mog domain VEA_002955 b067d467bccb5040ceebe954275e9998 170 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 152 2.3E-38 T 13-10-2018 IPR001453 MoaB/Mog domain VEA_002955 b067d467bccb5040ceebe954275e9998 170 SUPERFAMILY SSF53218 7 168 4.32E-48 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily VEA_002955 b067d467bccb5040ceebe954275e9998 170 Gene3D G3DSA:3.40.980.10 2 170 3.6E-53 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily VEA_002955 b067d467bccb5040ceebe954275e9998 170 PIRSF PIRSF006443 1 166 2.3E-67 T 13-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 VEA_002955 b067d467bccb5040ceebe954275e9998 170 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 7 168 1.1E-85 T 13-10-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 VEA_002955 b067d467bccb5040ceebe954275e9998 170 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 72 85 - T 13-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 VEA_001184 7d9c145f68faf82b0383bfdf938a2ca9 443 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 335 344 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VEA_001184 7d9c145f68faf82b0383bfdf938a2ca9 443 Gene3D G3DSA:3.40.50.2300 1 117 1.4E-12 T 13-10-2018 VEA_001184 7d9c145f68faf82b0383bfdf938a2ca9 443 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 149 162 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VEA_001184 7d9c145f68faf82b0383bfdf938a2ca9 443 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 211 226 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VEA_001184 7d9c145f68faf82b0383bfdf938a2ca9 443 Gene3D G3DSA:1.10.10.60 377 436 1.9E-11 T 13-10-2018 VEA_001184 7d9c145f68faf82b0383bfdf938a2ca9 443 Gene3D G3DSA:1.10.8.60 296 371 2.4E-23 T 13-10-2018 VEA_001184 7d9c145f68faf82b0383bfdf938a2ca9 443 Gene3D G3DSA:3.40.50.300 118 295 5.5E-66 T 13-10-2018 VEA_001184 7d9c145f68faf82b0383bfdf938a2ca9 443 SUPERFAMILY SSF46689 335 426 2.33E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_001184 7d9c145f68faf82b0383bfdf938a2ca9 443 SMART SM00382 145 288 4.6E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_001184 7d9c145f68faf82b0383bfdf938a2ca9 443 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 394 411 6.0E-5 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEA_001184 7d9c145f68faf82b0383bfdf938a2ca9 443 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 411 431 6.0E-5 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEA_001184 7d9c145f68faf82b0383bfdf938a2ca9 443 Pfam PF00158 Sigma-54 interaction domain 126 291 4.0E-70 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VEA_001184 7d9c145f68faf82b0383bfdf938a2ca9 443 Pfam PF02954 Bacterial regulatory protein, Fis family 390 426 2.0E-8 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEA_001184 7d9c145f68faf82b0383bfdf938a2ca9 443 SUPERFAMILY SSF52540 129 364 2.3E-72 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001184 7d9c145f68faf82b0383bfdf938a2ca9 443 SUPERFAMILY SSF52172 1 170 6.4E-19 T 13-10-2018 IPR011006 CheY-like superfamily VEA_003964 22054664831073a5839fb63cb90bc906 261 Pfam PF01925 Sulfite exporter TauE/SafE 12 251 1.8E-45 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VEA_002251 c6eaa829104e20f51c16c5996eded6c7 354 SUPERFAMILY SSF52540 114 338 1.09E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002251 c6eaa829104e20f51c16c5996eded6c7 354 Pfam PF03193 RsgA GTPase 100 277 9.1E-57 T 13-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 VEA_002251 c6eaa829104e20f51c16c5996eded6c7 354 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 75 335 2.3E-90 T 13-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 VEA_002251 c6eaa829104e20f51c16c5996eded6c7 354 Gene3D G3DSA:1.10.40.50 277 351 2.6E-25 T 13-10-2018 VEA_002251 c6eaa829104e20f51c16c5996eded6c7 354 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 41 341 37.716 T 13-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 VEA_002251 c6eaa829104e20f51c16c5996eded6c7 354 Gene3D G3DSA:3.40.50.300 103 276 8.6E-50 T 13-10-2018 VEA_002251 c6eaa829104e20f51c16c5996eded6c7 354 Gene3D G3DSA:2.40.50.140 36 102 6.8E-22 T 13-10-2018 VEA_001154 a6ac24409d1e02efe0c27db08acc50ff 224 ProSitePatterns PS01054 Transaldolase signature 1. 25 33 - T 13-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VEA_001154 a6ac24409d1e02efe0c27db08acc50ff 224 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 4 207 7.3E-44 T 13-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VEA_001154 a6ac24409d1e02efe0c27db08acc50ff 224 Gene3D G3DSA:3.20.20.70 1 220 9.4E-77 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_001154 a6ac24409d1e02efe0c27db08acc50ff 224 SUPERFAMILY SSF51569 3 216 5.65E-62 T 13-10-2018 VEA_003340 0485d7435323d5f271e406335d23d4c2 82 SUPERFAMILY SSF140129 2 78 6.41E-24 T 13-10-2018 IPR037203 Type III secretion, needle-protein-like superfamily GO:0009405|GO:0015031 VEA_003340 0485d7435323d5f271e406335d23d4c2 82 Pfam PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF 12 82 4.5E-25 T 13-10-2018 IPR021123 Type III secretion, needle-protein-like GO:0009405|GO:0015031 VEA_003340 0485d7435323d5f271e406335d23d4c2 82 TIGRFAM TIGR02105 III_needle: type III secretion apparatus needle protein 11 82 6.0E-21 T 13-10-2018 IPR011841 Type III secretion system, needle protein GO:0008565|GO:0009405|GO:0015031 VEA_003340 0485d7435323d5f271e406335d23d4c2 82 Gene3D G3DSA:1.20.58.90 1 82 3.3E-13 T 13-10-2018 VEA_000764 73f556a97878cd9cb68886f74cd34ad4 574 Gene3D G3DSA:1.10.3720.10 28 291 1.1E-48 T 13-10-2018 IPR035906 MetI-like superfamily VEA_000764 73f556a97878cd9cb68886f74cd34ad4 574 Gene3D G3DSA:1.10.3720.10 310 564 2.7E-29 T 13-10-2018 IPR035906 MetI-like superfamily VEA_000764 73f556a97878cd9cb68886f74cd34ad4 574 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 287 2.5E-10 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_000764 73f556a97878cd9cb68886f74cd34ad4 574 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 393 558 1.4E-8 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_000764 73f556a97878cd9cb68886f74cd34ad4 574 TIGRFAM TIGR03262 PhnU2: putative 2-aminoethylphosphonate ABC transporter, permease protein 32 574 1.3E-256 T 13-10-2018 IPR017664 2-aminoethylphosphonate ABC transport system, permease protein, putative VEA_000764 73f556a97878cd9cb68886f74cd34ad4 574 SUPERFAMILY SSF161098 315 553 3.79E-33 T 13-10-2018 IPR035906 MetI-like superfamily VEA_000764 73f556a97878cd9cb68886f74cd34ad4 574 SUPERFAMILY SSF161098 31 284 1.31E-42 T 13-10-2018 IPR035906 MetI-like superfamily VEA_002342 75ab96704cbd899c47e0a2b399f96a9f 153 Pfam PF13690 Chemotaxis phosphatase CheX 42 139 4.8E-22 T 13-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain VEA_002342 75ab96704cbd899c47e0a2b399f96a9f 153 Gene3D G3DSA:3.40.1550.10 1 153 3.3E-46 T 13-10-2018 IPR028976 CheC-like superfamily VEA_002342 75ab96704cbd899c47e0a2b399f96a9f 153 SUPERFAMILY SSF103039 1 153 1.83E-38 T 13-10-2018 IPR028976 CheC-like superfamily VEA_002437 86d49d6fba084d50af0988bcad7192ce 104 SUPERFAMILY SSF46973 1 99 1.26E-34 T 13-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 VEA_002437 86d49d6fba084d50af0988bcad7192ce 104 Gene3D G3DSA:1.20.58.280 2 103 2.5E-35 T 13-10-2018 VEA_002437 86d49d6fba084d50af0988bcad7192ce 104 PIRSF PIRSF000699 1 104 5.0E-38 T 13-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 VEA_002437 86d49d6fba084d50af0988bcad7192ce 104 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 7 98 8.2E-34 T 13-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 VEA_001288 7101d012e3ad02cd99ba51710f8100bd 217 SUPERFAMILY SSF116726 134 213 4.05E-10 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VEA_001288 7101d012e3ad02cd99ba51710f8100bd 217 Gene3D G3DSA:3.30.70.1450 138 213 4.0E-9 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VEA_001288 7101d012e3ad02cd99ba51710f8100bd 217 Gene3D G3DSA:3.40.50.720 1 137 5.5E-32 T 13-10-2018 VEA_001288 7101d012e3ad02cd99ba51710f8100bd 217 SUPERFAMILY SSF51735 3 133 2.28E-32 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_001288 7101d012e3ad02cd99ba51710f8100bd 217 Pfam PF02254 TrkA-N domain 5 119 3.0E-23 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VEA_002945 8cab4ac9da3bd9c0b8fe0475563870a6 210 SMART SM00900 100 192 9.0E-32 T 13-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 VEA_002945 8cab4ac9da3bd9c0b8fe0475563870a6 210 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 2 194 26.522 T 13-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 VEA_002945 8cab4ac9da3bd9c0b8fe0475563870a6 210 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 193 5.4E-64 T 13-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 VEA_002945 8cab4ac9da3bd9c0b8fe0475563870a6 210 Pfam PF04205 FMN-binding domain 100 188 9.5E-19 T 13-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 VEA_002945 8cab4ac9da3bd9c0b8fe0475563870a6 210 PIRSF PIRSF006091 1 204 1.4E-77 T 13-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 VEA_003518 73834fee2d77a7cdaa60d48790120b7c 114 Pfam PF12290 Protein of unknown function (DUF3802) 2 110 5.0E-43 T 13-10-2018 IPR020979 Uncharacterised protein family A0KLC6 VEA_001873 82ca05b9b90115453e03544784624d7b 626 SUPERFAMILY SSF50630 491 617 2.85E-31 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily VEA_001873 82ca05b9b90115453e03544784624d7b 626 SUPERFAMILY SSF50630 357 482 5.62E-12 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily VEA_001873 82ca05b9b90115453e03544784624d7b 626 SUPERFAMILY SSF50630 42 211 1.59E-22 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily VEA_001873 82ca05b9b90115453e03544784624d7b 626 SUPERFAMILY SSF50630 219 340 5.27E-19 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily VEA_001873 82ca05b9b90115453e03544784624d7b 626 Gene3D G3DSA:2.40.70.10 489 611 1.4E-31 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily VEA_001873 82ca05b9b90115453e03544784624d7b 626 Gene3D G3DSA:2.40.70.10 111 203 3.2E-10 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily VEA_001873 82ca05b9b90115453e03544784624d7b 626 Gene3D G3DSA:2.40.70.10 216 333 1.6E-5 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily VEA_001873 82ca05b9b90115453e03544784624d7b 626 Pfam PF05618 Putative ATP-dependant zinc protease 139 211 5.0E-5 T 13-10-2018 VEA_001873 82ca05b9b90115453e03544784624d7b 626 Pfam PF05618 Putative ATP-dependant zinc protease 499 619 2.4E-24 T 13-10-2018 VEA_000977 660b7706b91b768d4ad4a5376fb3b229 261 PIRSF PIRSF028205 1 258 1.1E-115 T 13-10-2018 IPR011220 Uncharacterised conserved protein UCP028205 VEA_000977 660b7706b91b768d4ad4a5376fb3b229 261 Gene3D G3DSA:2.50.20.10 28 255 4.0E-40 T 13-10-2018 VEA_000977 660b7706b91b768d4ad4a5376fb3b229 261 Pfam PF17131 Outer membrane lipoprotein-sorting protein 80 254 3.0E-37 T 13-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein VEA_001090 6a721e40dd19d457382422e41cee7c32 398 SUPERFAMILY SSF81901 77 281 7.94E-27 T 13-10-2018 VEA_001090 6a721e40dd19d457382422e41cee7c32 398 SMART SM00671 135 170 22.0 T 13-10-2018 IPR006597 Sel1-like repeat VEA_001090 6a721e40dd19d457382422e41cee7c32 398 SMART SM00671 243 276 100.0 T 13-10-2018 IPR006597 Sel1-like repeat VEA_001090 6a721e40dd19d457382422e41cee7c32 398 SMART SM00671 171 206 100.0 T 13-10-2018 IPR006597 Sel1-like repeat VEA_001090 6a721e40dd19d457382422e41cee7c32 398 SMART SM00671 207 242 1.4E-4 T 13-10-2018 IPR006597 Sel1-like repeat VEA_001090 6a721e40dd19d457382422e41cee7c32 398 SMART SM00671 67 97 270.0 T 13-10-2018 IPR006597 Sel1-like repeat VEA_001090 6a721e40dd19d457382422e41cee7c32 398 Pfam PF08238 Sel1 repeat 194 206 14.0 T 13-10-2018 IPR006597 Sel1-like repeat VEA_001090 6a721e40dd19d457382422e41cee7c32 398 Pfam PF08238 Sel1 repeat 136 169 10.0 T 13-10-2018 IPR006597 Sel1-like repeat VEA_001090 6a721e40dd19d457382422e41cee7c32 398 Pfam PF08238 Sel1 repeat 212 242 4.0E-5 T 13-10-2018 IPR006597 Sel1-like repeat VEA_001090 6a721e40dd19d457382422e41cee7c32 398 Pfam PF08238 Sel1 repeat 79 97 0.049 T 13-10-2018 IPR006597 Sel1-like repeat VEA_001090 6a721e40dd19d457382422e41cee7c32 398 Gene3D G3DSA:1.25.40.10 189 317 1.7E-17 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_001090 6a721e40dd19d457382422e41cee7c32 398 Gene3D G3DSA:1.25.40.10 23 185 1.4E-13 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_002286 632739fb0bdba2ba752e298095fad176 598 SUPERFAMILY SSF51735 401 529 1.52E-29 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_002286 632739fb0bdba2ba752e298095fad176 598 Gene3D G3DSA:3.40.50.720 398 559 3.4E-35 T 13-10-2018 VEA_002286 632739fb0bdba2ba752e298095fad176 598 Pfam PF00999 Sodium/hydrogen exchanger family 13 372 1.0E-66 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VEA_002286 632739fb0bdba2ba752e298095fad176 598 Pfam PF02254 TrkA-N domain 402 511 7.2E-22 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VEA_002286 632739fb0bdba2ba752e298095fad176 598 Gene3D G3DSA:1.20.1530.20 4 384 2.3E-82 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily VEA_002286 632739fb0bdba2ba752e298095fad176 598 PRINTS PR00335 TrkA potassium uptake protein signature 401 415 5.2E-7 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VEA_002286 632739fb0bdba2ba752e298095fad176 598 PRINTS PR00335 TrkA potassium uptake protein signature 418 432 5.2E-7 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VEA_002286 632739fb0bdba2ba752e298095fad176 598 PRINTS PR00335 TrkA potassium uptake protein signature 458 468 5.2E-7 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VEA_002286 632739fb0bdba2ba752e298095fad176 598 PRINTS PR00335 TrkA potassium uptake protein signature 447 457 5.2E-7 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VEA_002286 632739fb0bdba2ba752e298095fad176 598 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 3 598 47.805 T 13-10-2018 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 VEA_002286 632739fb0bdba2ba752e298095fad176 598 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 16 283 7.8E-82 T 13-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 VEA_001561 4d2c59638dd36d036462cfa395a40229 296 SUPERFAMILY SSF46785 2 111 8.16E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_001561 4d2c59638dd36d036462cfa395a40229 296 SUPERFAMILY SSF53850 89 290 1.79E-34 T 13-10-2018 VEA_001561 4d2c59638dd36d036462cfa395a40229 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.6E-15 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_001561 4d2c59638dd36d036462cfa395a40229 296 Gene3D G3DSA:1.10.10.10 1 82 4.7E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001561 4d2c59638dd36d036462cfa395a40229 296 Gene3D G3DSA:3.40.190.290 91 294 1.8E-35 T 13-10-2018 VEA_001561 4d2c59638dd36d036462cfa395a40229 296 Pfam PF03466 LysR substrate binding domain 88 287 1.9E-36 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_002986 5886199fb5d4deaeb993e0a343a8f12e 149 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 145 3.0E-38 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I VEA_002986 5886199fb5d4deaeb993e0a343a8f12e 149 SUPERFAMILY SSF52788 1 149 1.11E-48 T 13-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily VEA_002986 5886199fb5d4deaeb993e0a343a8f12e 149 Gene3D G3DSA:3.40.50.2300 1 149 1.3E-58 T 13-10-2018 VEA_002986 5886199fb5d4deaeb993e0a343a8f12e 149 SMART SM00226 2 148 2.2E-44 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I VEA_002986 5886199fb5d4deaeb993e0a343a8f12e 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 9.9E-25 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VEA_002986 5886199fb5d4deaeb993e0a343a8f12e 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 120 135 9.9E-25 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VEA_002986 5886199fb5d4deaeb993e0a343a8f12e 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 102 115 9.9E-25 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VEA_002986 5886199fb5d4deaeb993e0a343a8f12e 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 9.9E-25 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VEA_002986 5886199fb5d4deaeb993e0a343a8f12e 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 9.9E-25 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VEA_003952 2122a225f15d83e5a66643a2e48f1bb6 158 Pfam PF05433 Glycine zipper 2TM domain 63 100 7.2E-10 T 13-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 VEA_002702 c432e7662bf9462cb4d5cc378dfbad45 450 Gene3D G3DSA:1.20.1250.20 11 222 1.1E-11 T 13-10-2018 VEA_002702 c432e7662bf9462cb4d5cc378dfbad45 450 SUPERFAMILY SSF103473 11 436 1.57E-32 T 13-10-2018 IPR036259 MFS transporter superfamily VEA_002702 c432e7662bf9462cb4d5cc378dfbad45 450 Gene3D G3DSA:1.20.1250.20 248 441 3.2E-8 T 13-10-2018 VEA_002702 c432e7662bf9462cb4d5cc378dfbad45 450 Pfam PF07690 Major Facilitator Superfamily 24 397 1.5E-16 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEA_001915 637837b0cdbb02c71d120458de9c200e 205 SUPERFAMILY SSF46626 6 105 1.23E-21 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEA_001915 637837b0cdbb02c71d120458de9c200e 205 Gene3D G3DSA:1.10.760.10 109 205 2.9E-27 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEA_001915 637837b0cdbb02c71d120458de9c200e 205 Pfam PF00034 Cytochrome c 25 103 1.4E-9 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001915 637837b0cdbb02c71d120458de9c200e 205 Pfam PF00034 Cytochrome c 116 201 1.8E-9 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001915 637837b0cdbb02c71d120458de9c200e 205 SUPERFAMILY SSF46626 114 203 3.15E-20 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEA_001915 637837b0cdbb02c71d120458de9c200e 205 PIRSF PIRSF000005 1 205 3.4E-65 T 13-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 VEA_001915 637837b0cdbb02c71d120458de9c200e 205 Gene3D G3DSA:1.10.760.10 19 108 2.7E-26 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEA_000488 6efdd9a60a029c48c5233f7a8b13492b 276 Gene3D G3DSA:3.40.250.10 158 276 1.7E-40 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily VEA_000488 6efdd9a60a029c48c5233f7a8b13492b 276 Pfam PF00581 Rhodanese-like domain 7 124 1.3E-12 T 13-10-2018 IPR001763 Rhodanese-like domain VEA_000488 6efdd9a60a029c48c5233f7a8b13492b 276 Pfam PF00581 Rhodanese-like domain 162 268 1.2E-11 T 13-10-2018 IPR001763 Rhodanese-like domain VEA_000488 6efdd9a60a029c48c5233f7a8b13492b 276 SMART SM00450 152 272 2.5E-13 T 13-10-2018 IPR001763 Rhodanese-like domain VEA_000488 6efdd9a60a029c48c5233f7a8b13492b 276 SMART SM00450 5 128 2.6E-16 T 13-10-2018 IPR001763 Rhodanese-like domain VEA_000488 6efdd9a60a029c48c5233f7a8b13492b 276 SUPERFAMILY SSF52821 157 275 1.03E-32 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily VEA_000488 6efdd9a60a029c48c5233f7a8b13492b 276 Gene3D G3DSA:3.40.250.10 1 142 4.4E-38 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily VEA_000488 6efdd9a60a029c48c5233f7a8b13492b 276 SUPERFAMILY SSF52821 3 131 6.16E-32 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily VEA_001337 f785b2c039fd727adf8d603cd389346d 342 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 4 342 1.5E-137 T 13-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEA_001337 f785b2c039fd727adf8d603cd389346d 342 ProSitePatterns PS00482 Dihydroorotase signature 1. 11 19 - T 13-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEA_001337 f785b2c039fd727adf8d603cd389346d 342 Gene3D G3DSA:3.20.20.140 2 342 4.7E-111 T 13-10-2018 VEA_001337 f785b2c039fd727adf8d603cd389346d 342 PIRSF PIRSF001237 1 342 4.3E-142 T 13-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEA_001337 f785b2c039fd727adf8d603cd389346d 342 ProSitePatterns PS00483 Dihydroorotase signature 2. 244 255 - T 13-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEA_001337 f785b2c039fd727adf8d603cd389346d 342 Pfam PF01979 Amidohydrolase family 11 315 1.2E-21 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VEA_001337 f785b2c039fd727adf8d603cd389346d 342 SUPERFAMILY SSF51556 1 342 3.04E-146 T 13-10-2018 IPR032466 Metal-dependent hydrolase VEA_001337 f785b2c039fd727adf8d603cd389346d 342 Hamap MF_00219 Dihydroorotase [pyrC]. 2 342 46.548 T 13-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEA_002169 6e8dd61348e08b7e2bd2dca0ffdcb769 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 1.5E-23 T 13-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 VEA_002169 6e8dd61348e08b7e2bd2dca0ffdcb769 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 3.7E-29 T 13-10-2018 IPR020784 Ribosomal protein L11, N-terminal VEA_002169 6e8dd61348e08b7e2bd2dca0ffdcb769 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 71 1.0E-14 T 13-10-2018 VEA_002169 6e8dd61348e08b7e2bd2dca0ffdcb769 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 5.1E-64 T 13-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002169 6e8dd61348e08b7e2bd2dca0ffdcb769 142 SUPERFAMILY SSF54747 3 73 5.1E-30 T 13-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily VEA_002169 6e8dd61348e08b7e2bd2dca0ffdcb769 142 Gene3D G3DSA:3.30.1550.10 2 72 1.0E-34 T 13-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily VEA_002169 6e8dd61348e08b7e2bd2dca0ffdcb769 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.525 T 13-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 VEA_002169 6e8dd61348e08b7e2bd2dca0ffdcb769 142 Gene3D G3DSA:1.10.10.250 73 141 1.1E-25 T 13-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily VEA_002169 6e8dd61348e08b7e2bd2dca0ffdcb769 142 SMART SM00649 9 141 2.2E-82 T 13-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 VEA_002169 6e8dd61348e08b7e2bd2dca0ffdcb769 142 SUPERFAMILY SSF46906 68 141 2.88E-25 T 13-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily VEA_002169 6e8dd61348e08b7e2bd2dca0ffdcb769 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 13-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_000959 f5e0a4f436c7a76b3c7636bc6512afd3 297 Pfam PF03466 LysR substrate binding domain 124 277 7.4E-9 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_000959 f5e0a4f436c7a76b3c7636bc6512afd3 297 SUPERFAMILY SSF46785 1 81 8.41E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000959 f5e0a4f436c7a76b3c7636bc6512afd3 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.9E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000959 f5e0a4f436c7a76b3c7636bc6512afd3 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.9E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000959 f5e0a4f436c7a76b3c7636bc6512afd3 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.9E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000959 f5e0a4f436c7a76b3c7636bc6512afd3 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 2.0E-17 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000959 f5e0a4f436c7a76b3c7636bc6512afd3 297 SUPERFAMILY SSF53850 91 279 6.88E-15 T 13-10-2018 VEA_000959 f5e0a4f436c7a76b3c7636bc6512afd3 297 Gene3D G3DSA:1.10.10.10 1 83 1.4E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_002723 b8e084133566f96a096f03bb6059df30 68 Pfam PF06786 Uncharacterised protein family (UPF0253) 1 67 1.6E-36 T 13-10-2018 IPR009624 Uncharacterised protein family UPF0253 VEA_002723 b8e084133566f96a096f03bb6059df30 68 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 68 29.93 T 13-10-2018 IPR009624 Uncharacterised protein family UPF0253 VEA_002723 b8e084133566f96a096f03bb6059df30 68 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 7 65 6.0E-27 T 13-10-2018 IPR009624 Uncharacterised protein family UPF0253 VEA_004384 66c2ec513a3065b41580f123133f75fc 402 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 287 398 9.5E-23 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_004384 66c2ec513a3065b41580f123133f75fc 402 Pfam PF00989 PAS fold 69 135 9.0E-8 T 13-10-2018 IPR013767 PAS fold GO:0006355 VEA_004384 66c2ec513a3065b41580f123133f75fc 402 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 396 1.6E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_004384 66c2ec513a3065b41580f123133f75fc 402 PRINTS PR00344 Bacterial sensor protein C-terminal signature 324 338 1.6E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_004384 66c2ec513a3065b41580f123133f75fc 402 PRINTS PR00344 Bacterial sensor protein C-terminal signature 359 377 1.6E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_004384 66c2ec513a3065b41580f123133f75fc 402 PRINTS PR00344 Bacterial sensor protein C-terminal signature 342 352 1.6E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_004384 66c2ec513a3065b41580f123133f75fc 402 Pfam PF00512 His Kinase A (phospho-acceptor) domain 175 241 3.4E-16 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_004384 66c2ec513a3065b41580f123133f75fc 402 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 64 394 2.1E-139 T 13-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 VEA_004384 66c2ec513a3065b41580f123133f75fc 402 Pfam PF11808 Domain of unknown function (DUF3329) 2 61 3.3E-21 T 13-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 VEA_004384 66c2ec513a3065b41580f123133f75fc 402 SMART SM00091 68 136 7.2E-6 T 13-10-2018 IPR000014 PAS domain VEA_004384 66c2ec513a3065b41580f123133f75fc 402 SMART SM00387 287 399 7.2E-33 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_004384 66c2ec513a3065b41580f123133f75fc 402 SUPERFAMILY SSF55785 56 166 1.69E-11 T 13-10-2018 IPR035965 PAS domain superfamily VEA_004384 66c2ec513a3065b41580f123133f75fc 402 SUPERFAMILY SSF55874 231 396 2.62E-40 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_004384 66c2ec513a3065b41580f123133f75fc 402 SUPERFAMILY SSF47384 162 241 1.84E-18 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEA_004384 66c2ec513a3065b41580f123133f75fc 402 Gene3D G3DSA:3.30.565.10 250 399 1.3E-36 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_004384 66c2ec513a3065b41580f123133f75fc 402 Gene3D G3DSA:3.30.450.20 55 171 5.0E-10 T 13-10-2018 VEA_004384 66c2ec513a3065b41580f123133f75fc 402 Gene3D G3DSA:1.10.287.130 172 242 1.8E-20 T 13-10-2018 VEA_004384 66c2ec513a3065b41580f123133f75fc 402 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 69 173 9.0E-6 T 13-10-2018 IPR000014 PAS domain VEA_004384 66c2ec513a3065b41580f123133f75fc 402 SMART SM00388 175 242 8.9E-20 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_002820 38db79538f05200998a50d90d50985d8 623 Pfam PF02120 Flagellar hook-length control protein FliK 494 577 1.5E-25 T 13-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal VEA_002820 38db79538f05200998a50d90d50985d8 623 Gene3D G3DSA:3.30.750.140 472 587 9.5E-32 T 13-10-2018 IPR038610 FliK-like, C-terminal domain superfamily VEA_002983 7a6af7fed87191ea7e0d6a4553dec6ce 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 9 198 1.3E-41 T 13-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 VEA_002983 7a6af7fed87191ea7e0d6a4553dec6ce 213 Gene3D G3DSA:3.40.50.300 3 213 2.2E-60 T 13-10-2018 VEA_002983 7a6af7fed87191ea7e0d6a4553dec6ce 213 TIGRFAM TIGR00235 udk: uridine kinase 3 211 8.2E-90 T 13-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 VEA_002983 7a6af7fed87191ea7e0d6a4553dec6ce 213 SUPERFAMILY SSF52540 6 204 1.32E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002983 7a6af7fed87191ea7e0d6a4553dec6ce 213 Hamap MF_00551 Uridine kinase [udk]. 4 212 39.476 T 13-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 VEA_002983 7a6af7fed87191ea7e0d6a4553dec6ce 213 PRINTS PR00988 Uridine kinase signature 178 191 2.5E-36 T 13-10-2018 VEA_002983 7a6af7fed87191ea7e0d6a4553dec6ce 213 PRINTS PR00988 Uridine kinase signature 156 167 2.5E-36 T 13-10-2018 VEA_002983 7a6af7fed87191ea7e0d6a4553dec6ce 213 PRINTS PR00988 Uridine kinase signature 142 152 2.5E-36 T 13-10-2018 VEA_002983 7a6af7fed87191ea7e0d6a4553dec6ce 213 PRINTS PR00988 Uridine kinase signature 41 52 2.5E-36 T 13-10-2018 VEA_002983 7a6af7fed87191ea7e0d6a4553dec6ce 213 PRINTS PR00988 Uridine kinase signature 7 24 2.5E-36 T 13-10-2018 VEA_002983 7a6af7fed87191ea7e0d6a4553dec6ce 213 PRINTS PR00988 Uridine kinase signature 86 101 2.5E-36 T 13-10-2018 VEA_003062 d2dac32e78b675a9a996de89964f819e 225 Gene3D G3DSA:3.40.50.2300 1 121 4.9E-34 T 13-10-2018 VEA_003062 d2dac32e78b675a9a996de89964f819e 225 SUPERFAMILY SSF46894 123 222 9.07E-21 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEA_003062 d2dac32e78b675a9a996de89964f819e 225 Gene3D G3DSA:1.10.10.10 122 223 1.4E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_003062 d2dac32e78b675a9a996de89964f819e 225 Pfam PF00072 Response regulator receiver domain 4 112 1.1E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_003062 d2dac32e78b675a9a996de89964f819e 225 SMART SM00862 147 221 3.2E-14 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEA_003062 d2dac32e78b675a9a996de89964f819e 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 221 3.0E-16 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEA_003062 d2dac32e78b675a9a996de89964f819e 225 SMART SM00448 2 113 2.6E-36 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_003062 d2dac32e78b675a9a996de89964f819e 225 SUPERFAMILY SSF52172 1 125 6.26E-39 T 13-10-2018 IPR011006 CheY-like superfamily VEA_000156 03dec78c423765bb943631fb1fa7ab61 877 SUPERFAMILY SSF51735 2 128 3.03E-26 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_000156 03dec78c423765bb943631fb1fa7ab61 877 Gene3D G3DSA:3.30.470.20 476 688 3.0E-54 T 13-10-2018 VEA_000156 03dec78c423765bb943631fb1fa7ab61 877 Gene3D G3DSA:3.30.1490.20 495 572 3.0E-54 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VEA_000156 03dec78c423765bb943631fb1fa7ab61 877 Gene3D G3DSA:3.40.50.261 279 449 1.2E-51 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VEA_000156 03dec78c423765bb943631fb1fa7ab61 877 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 140 274 8.4E-43 T 13-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain VEA_000156 03dec78c423765bb943631fb1fa7ab61 877 SUPERFAMILY SSF55729 722 861 9.57E-19 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_000156 03dec78c423765bb943631fb1fa7ab61 877 Pfam PF13380 CoA binding domain 12 123 7.6E-16 T 13-10-2018 IPR003781 CoA-binding GO:0048037 VEA_000156 03dec78c423765bb943631fb1fa7ab61 877 Gene3D G3DSA:3.40.630.30 713 877 1.0E-37 T 13-10-2018 VEA_000156 03dec78c423765bb943631fb1fa7ab61 877 SUPERFAMILY SSF52210 281 441 7.33E-41 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VEA_000156 03dec78c423765bb943631fb1fa7ab61 877 Pfam PF13549 ATP-grasp domain 470 690 3.4E-67 T 13-10-2018 VEA_000156 03dec78c423765bb943631fb1fa7ab61 877 SMART SM00881 7 102 1.6E-20 T 13-10-2018 IPR003781 CoA-binding GO:0048037 VEA_000156 03dec78c423765bb943631fb1fa7ab61 877 SUPERFAMILY SSF56059 477 683 3.53E-25 T 13-10-2018 VEA_000156 03dec78c423765bb943631fb1fa7ab61 877 Gene3D G3DSA:3.40.50.720 1 118 5.0E-26 T 13-10-2018 VEA_000156 03dec78c423765bb943631fb1fa7ab61 877 Gene3D G3DSA:3.40.50.261 119 277 3.6E-43 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VEA_000156 03dec78c423765bb943631fb1fa7ab61 877 Pfam PF00583 Acetyltransferase (GNAT) family 756 859 1.9E-6 T 13-10-2018 IPR000182 GNAT domain VEA_000156 03dec78c423765bb943631fb1fa7ab61 877 SUPERFAMILY SSF52210 118 276 6.02E-32 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VEA_004467 4660fcafed53a901f5196aa5b6999262 489 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 478 8.3E-199 T 13-10-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 VEA_004467 4660fcafed53a901f5196aa5b6999262 489 SUPERFAMILY SSF46548 2 155 6.28E-36 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VEA_004467 4660fcafed53a901f5196aa5b6999262 489 PRINTS PR00419 Adrenodoxin reductase family signature 146 168 4.9E-23 T 13-10-2018 VEA_004467 4660fcafed53a901f5196aa5b6999262 489 PRINTS PR00419 Adrenodoxin reductase family signature 169 182 4.9E-23 T 13-10-2018 VEA_004467 4660fcafed53a901f5196aa5b6999262 489 PRINTS PR00419 Adrenodoxin reductase family signature 211 221 4.9E-23 T 13-10-2018 VEA_004467 4660fcafed53a901f5196aa5b6999262 489 PRINTS PR00419 Adrenodoxin reductase family signature 286 300 4.9E-23 T 13-10-2018 VEA_004467 4660fcafed53a901f5196aa5b6999262 489 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 38 131 2.9E-24 T 13-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 VEA_004467 4660fcafed53a901f5196aa5b6999262 489 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 146 459 3.2E-26 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VEA_004467 4660fcafed53a901f5196aa5b6999262 489 SUPERFAMILY SSF51971 143 407 2.0E-66 T 13-10-2018 VEA_004467 4660fcafed53a901f5196aa5b6999262 489 Gene3D G3DSA:3.40.50.720 144 250 4.1E-14 T 13-10-2018 VEA_004467 4660fcafed53a901f5196aa5b6999262 489 Gene3D G3DSA:1.10.1060.10 10 143 4.2E-24 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VEA_004467 4660fcafed53a901f5196aa5b6999262 489 Gene3D G3DSA:3.50.50.60 251 406 4.3E-39 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_003940 b6abde8a832c38e55ccbe69fa26e80ef 215 SUPERFAMILY SSF89155 8 212 2.75E-51 T 13-10-2018 IPR036411 TorD-like superfamily VEA_003940 b6abde8a832c38e55ccbe69fa26e80ef 215 Gene3D G3DSA:1.20.1280.20 129 214 2.6E-25 T 13-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VEA_003940 b6abde8a832c38e55ccbe69fa26e80ef 215 Pfam PF02613 Nitrate reductase delta subunit 50 182 8.3E-37 T 13-10-2018 IPR020945 DMSO/Nitrate reductase chaperone VEA_003940 b6abde8a832c38e55ccbe69fa26e80ef 215 Hamap MF_01150 Chaperone protein TorD [torD]. 3 212 34.944 T 13-10-2018 IPR023069 Chaperone TorD VEA_003940 b6abde8a832c38e55ccbe69fa26e80ef 215 Gene3D G3DSA:1.20.120.1820 3 126 8.9E-39 T 13-10-2018 VEA_002979 9486646035e1094d383e0aec7eafce80 279 Gene3D G3DSA:1.20.120.530 80 279 6.7E-34 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VEA_002979 9486646035e1094d383e0aec7eafce80 279 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 276 2.3E-115 T 13-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 VEA_002979 9486646035e1094d383e0aec7eafce80 279 SUPERFAMILY SSF46785 12 74 9.45E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_002979 9486646035e1094d383e0aec7eafce80 279 SUPERFAMILY SSF48008 79 270 1.02E-56 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VEA_002979 9486646035e1094d383e0aec7eafce80 279 Gene3D G3DSA:1.10.10.10 1 79 1.3E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_002979 9486646035e1094d383e0aec7eafce80 279 SMART SM00345 12 71 1.6E-22 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_002979 9486646035e1094d383e0aec7eafce80 279 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 279 138.476 T 13-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 VEA_002979 9486646035e1094d383e0aec7eafce80 279 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 71 3.1E-20 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_002979 9486646035e1094d383e0aec7eafce80 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 3.5E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_002979 9486646035e1094d383e0aec7eafce80 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 3.5E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_002979 9486646035e1094d383e0aec7eafce80 279 Pfam PF07840 FadR C-terminal domain 72 274 2.9E-69 T 13-10-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 VEA_002062 f0ab26e08d543fae8a163dcc25ecaa6d 189 SUPERFAMILY SSF57783 66 109 1.06E-14 T 13-10-2018 VEA_002062 f0ab26e08d543fae8a163dcc25ecaa6d 189 SUPERFAMILY SSF57783 16 64 9.35E-15 T 13-10-2018 VEA_002062 f0ab26e08d543fae8a163dcc25ecaa6d 189 Gene3D G3DSA:3.30.65.10 62 105 1.9E-8 T 13-10-2018 VEA_002062 f0ab26e08d543fae8a163dcc25ecaa6d 189 Gene3D G3DSA:3.30.65.10 11 61 2.3E-10 T 13-10-2018 VEA_002062 f0ab26e08d543fae8a163dcc25ecaa6d 189 SUPERFAMILY SSF57783 105 147 3.74E-5 T 13-10-2018 VEA_002062 f0ab26e08d543fae8a163dcc25ecaa6d 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 115 152 4.3E-16 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VEA_002062 f0ab26e08d543fae8a163dcc25ecaa6d 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 21 56 1.3E-15 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VEA_002062 f0ab26e08d543fae8a163dcc25ecaa6d 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 67 103 1.0E-16 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VEA_002062 f0ab26e08d543fae8a163dcc25ecaa6d 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 155 186 1.0 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VEA_000662 aaac460ba8d40bb9136f6642feb1cdfe 274 SUPERFAMILY SSF53649 2 259 1.05E-48 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VEA_000662 aaac460ba8d40bb9136f6642feb1cdfe 274 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 5 215 9.4E-14 T 13-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 VEA_000662 aaac460ba8d40bb9136f6642feb1cdfe 274 Gene3D G3DSA:3.40.720.10 3 272 1.4E-30 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VEA_000500 8f4a2d40faa94e3034d5e42df12a4d2a 185 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 1 174 6.2E-50 T 13-10-2018 IPR010976 Beta-phosphoglucomutase hydrolase VEA_000500 8f4a2d40faa94e3034d5e42df12a4d2a 185 Gene3D G3DSA:3.40.50.1000 1 176 3.4E-39 T 13-10-2018 IPR023214 HAD superfamily VEA_000500 8f4a2d40faa94e3034d5e42df12a4d2a 185 Gene3D G3DSA:1.10.150.240 7 77 3.4E-39 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VEA_000500 8f4a2d40faa94e3034d5e42df12a4d2a 185 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 113 174 1.2E-13 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEA_000500 8f4a2d40faa94e3034d5e42df12a4d2a 185 SUPERFAMILY SSF56784 1 178 3.01E-40 T 13-10-2018 IPR036412 HAD-like superfamily VEA_000500 8f4a2d40faa94e3034d5e42df12a4d2a 185 Pfam PF13419 Haloacid dehalogenase-like hydrolase 1 174 8.1E-24 T 13-10-2018 VEA_002492 a3b40657245c53bb1f9f305e8f581756 208 PIRSF PIRSF016938 1 205 8.5E-35 T 13-10-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0016989 VEA_002492 a3b40657245c53bb1f9f305e8f581756 208 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 140 191 1.3E-19 T 13-10-2018 IPR005573 Anti sigma-E protein RseA, C-terminal VEA_002492 a3b40657245c53bb1f9f305e8f581756 208 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 99 5.1E-35 T 13-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 VEA_002492 a3b40657245c53bb1f9f305e8f581756 208 Gene3D G3DSA:1.10.10.880 2 67 6.8E-25 T 13-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 VEA_002492 a3b40657245c53bb1f9f305e8f581756 208 SUPERFAMILY SSF89069 4 67 2.88E-21 T 13-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 VEA_003956 ae722e137669a67e756a79a43da15f44 755 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 213 326 6.7E-12 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VEA_003956 ae722e137669a67e756a79a43da15f44 755 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 597 611 4.8E-36 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 VEA_003956 ae722e137669a67e756a79a43da15f44 755 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 493 511 4.8E-36 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 VEA_003956 ae722e137669a67e756a79a43da15f44 755 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 535 553 4.8E-36 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 VEA_003956 ae722e137669a67e756a79a43da15f44 755 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 564 582 4.8E-36 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 VEA_003956 ae722e137669a67e756a79a43da15f44 755 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 9.1E-13 T 13-10-2018 IPR004176 Clp, N-terminal VEA_003956 ae722e137669a67e756a79a43da15f44 755 Gene3D G3DSA:1.10.8.60 655 755 1.4E-30 T 13-10-2018 VEA_003956 ae722e137669a67e756a79a43da15f44 755 Gene3D G3DSA:1.10.8.60 353 440 7.3E-35 T 13-10-2018 VEA_003956 ae722e137669a67e756a79a43da15f44 755 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 655 735 9.5E-24 T 13-10-2018 IPR019489 Clp ATPase, C-terminal VEA_003956 ae722e137669a67e756a79a43da15f44 755 SUPERFAMILY SSF52540 439 746 5.94E-73 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003956 ae722e137669a67e756a79a43da15f44 755 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 520 538 - T 13-10-2018 IPR028299 ClpA/B, conserved site 2 VEA_003956 ae722e137669a67e756a79a43da15f44 755 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 736 0.0 T 13-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 VEA_003956 ae722e137669a67e756a79a43da15f44 755 Gene3D G3DSA:1.10.1780.10 1 143 8.7E-43 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VEA_003956 ae722e137669a67e756a79a43da15f44 755 SMART SM01086 655 744 1.2E-35 T 13-10-2018 IPR019489 Clp ATPase, C-terminal VEA_003956 ae722e137669a67e756a79a43da15f44 755 SUPERFAMILY SSF52540 170 427 2.77E-65 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003956 ae722e137669a67e756a79a43da15f44 755 Gene3D G3DSA:3.40.50.300 158 352 1.5E-62 T 13-10-2018 VEA_003956 ae722e137669a67e756a79a43da15f44 755 Gene3D G3DSA:3.40.50.300 441 654 6.9E-76 T 13-10-2018 VEA_003956 ae722e137669a67e756a79a43da15f44 755 Pfam PF07724 AAA domain (Cdc48 subfamily) 488 649 2.1E-47 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VEA_003956 ae722e137669a67e756a79a43da15f44 755 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 304 316 - T 13-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 VEA_003956 ae722e137669a67e756a79a43da15f44 755 SMART SM00382 208 353 2.9E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_003956 ae722e137669a67e756a79a43da15f44 755 SMART SM00382 489 656 5.8E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_003956 ae722e137669a67e756a79a43da15f44 755 SUPERFAMILY SSF81923 1 142 9.16E-59 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VEA_000820 3e82135cce7d2eac8da8102632d72479 678 SUPERFAMILY SSF101898 328 635 1.26E-5 T 13-10-2018 VEA_000820 3e82135cce7d2eac8da8102632d72479 678 Pfam PF05787 Bacterial protein of unknown function (DUF839) 74 641 8.8E-152 T 13-10-2018 IPR008557 Protein of unknown function DUF839 VEA_003036 0addbbfee760892c39bf30b2c1855833 200 SMART SM00448 8 119 4.6E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_003036 0addbbfee760892c39bf30b2c1855833 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 5.0E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_003036 0addbbfee760892c39bf30b2c1855833 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 5.0E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_003036 0addbbfee760892c39bf30b2c1855833 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 5.0E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_003036 0addbbfee760892c39bf30b2c1855833 200 SUPERFAMILY SSF52172 8 122 5.83E-30 T 13-10-2018 IPR011006 CheY-like superfamily VEA_003036 0addbbfee760892c39bf30b2c1855833 200 Pfam PF00196 Bacterial regulatory proteins, luxR family 141 193 1.7E-17 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_003036 0addbbfee760892c39bf30b2c1855833 200 ProSitePatterns PS00622 LuxR-type HTH domain signature. 156 183 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_003036 0addbbfee760892c39bf30b2c1855833 200 SMART SM00421 139 196 2.3E-16 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_003036 0addbbfee760892c39bf30b2c1855833 200 Gene3D G3DSA:3.40.50.2300 3 129 1.4E-36 T 13-10-2018 VEA_003036 0addbbfee760892c39bf30b2c1855833 200 Gene3D G3DSA:1.10.10.10 134 196 9.2E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_003036 0addbbfee760892c39bf30b2c1855833 200 Pfam PF00072 Response regulator receiver domain 10 119 3.1E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_003036 0addbbfee760892c39bf30b2c1855833 200 SUPERFAMILY SSF46894 129 197 2.96E-17 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEA_004395 ead6179c5b82e27acb58b30b12b77651 242 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 240 37.328 T 13-10-2018 IPR017689 Outer membrane protein assembly factor BamD VEA_004395 ead6179c5b82e27acb58b30b12b77651 242 Gene3D G3DSA:1.25.40.10 28 242 1.8E-54 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_004395 ead6179c5b82e27acb58b30b12b77651 242 Pfam PF13525 Outer membrane lipoprotein 26 234 2.5E-79 T 13-10-2018 IPR039565 Outer membrane lipoprotein BamD-like VEA_004395 ead6179c5b82e27acb58b30b12b77651 242 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 5 239 2.2E-79 T 13-10-2018 IPR017689 Outer membrane protein assembly factor BamD VEA_004395 ead6179c5b82e27acb58b30b12b77651 242 SUPERFAMILY SSF48452 30 119 6.07E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_001278 886b3c752e4dcf3e850b1e4537edfa2c 535 SUPERFAMILY SSF90123 2 269 1.83E-30 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEA_001278 886b3c752e4dcf3e850b1e4537edfa2c 535 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 1 515 7.5E-177 T 13-10-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 VEA_001278 886b3c752e4dcf3e850b1e4537edfa2c 535 Pfam PF00005 ABC transporter 306 453 9.0E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_001278 886b3c752e4dcf3e850b1e4537edfa2c 535 SMART SM00382 315 509 2.2E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_001278 886b3c752e4dcf3e850b1e4537edfa2c 535 SUPERFAMILY SSF52540 278 513 2.45E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001278 886b3c752e4dcf3e850b1e4537edfa2c 535 ProSitePatterns PS00211 ABC transporters family signature. 426 440 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_001278 886b3c752e4dcf3e850b1e4537edfa2c 535 Gene3D G3DSA:3.40.50.300 273 519 6.4E-67 T 13-10-2018 VEA_001278 886b3c752e4dcf3e850b1e4537edfa2c 535 Gene3D G3DSA:1.20.1560.10 1 272 1.4E-23 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEA_002496 f9118fea40386726ad0a55e74f55cd6c 299 Gene3D G3DSA:2.10.109.10 78 272 4.3E-74 T 13-10-2018 VEA_002496 f9118fea40386726ad0a55e74f55cd6c 299 ProSitePatterns PS00760 Signal peptidases I lysine active site. 146 158 - T 13-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 VEA_002496 f9118fea40386726ad0a55e74f55cd6c 299 Gene3D G3DSA:2.170.230.10 155 231 4.3E-74 T 13-10-2018 VEA_002496 f9118fea40386726ad0a55e74f55cd6c 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 144 156 4.4E-26 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VEA_002496 f9118fea40386726ad0a55e74f55cd6c 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 80 96 4.4E-26 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VEA_002496 f9118fea40386726ad0a55e74f55cd6c 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 232 251 4.4E-26 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VEA_002496 f9118fea40386726ad0a55e74f55cd6c 299 ProSitePatterns PS00501 Signal peptidases I serine active site. 89 96 - T 13-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 VEA_002496 f9118fea40386726ad0a55e74f55cd6c 299 SUPERFAMILY SSF51306 78 298 4.71E-70 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily VEA_002496 f9118fea40386726ad0a55e74f55cd6c 299 Pfam PF00717 Peptidase S24-like 86 162 9.3E-22 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C VEA_002496 f9118fea40386726ad0a55e74f55cd6c 299 ProSitePatterns PS00761 Signal peptidases I signature 3. 237 250 - T 13-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 VEA_002496 f9118fea40386726ad0a55e74f55cd6c 299 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 66 272 1.2E-47 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VEA_002496 f9118fea40386726ad0a55e74f55cd6c 299 Pfam PF10502 Signal peptidase, peptidase S26 217 269 8.9E-8 T 13-10-2018 IPR019533 Peptidase S26 VEA_000312 8d141c4565d79c02865ef0182bef6794 285 Gene3D G3DSA:1.10.10.10 1 83 2.7E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000312 8d141c4565d79c02865ef0182bef6794 285 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 59 2.1E-18 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000312 8d141c4565d79c02865ef0182bef6794 285 SUPERFAMILY SSF53850 115 272 4.52E-26 T 13-10-2018 VEA_000312 8d141c4565d79c02865ef0182bef6794 285 Gene3D G3DSA:3.40.190.10 115 270 2.3E-26 T 13-10-2018 VEA_000312 8d141c4565d79c02865ef0182bef6794 285 Pfam PF03466 LysR substrate binding domain 115 274 5.8E-13 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_000312 8d141c4565d79c02865ef0182bef6794 285 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.8E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000312 8d141c4565d79c02865ef0182bef6794 285 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.8E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000312 8d141c4565d79c02865ef0182bef6794 285 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.8E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000312 8d141c4565d79c02865ef0182bef6794 285 Gene3D G3DSA:3.40.190.10 148 246 2.3E-26 T 13-10-2018 VEA_000312 8d141c4565d79c02865ef0182bef6794 285 SUPERFAMILY SSF46785 1 81 1.24E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000414 2c2f6e5a685e21aeca2bd1e6ef98b39d 92 PIRSF PIRSF028784 1 92 1.9E-28 T 13-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 VEA_000414 2c2f6e5a685e21aeca2bd1e6ef98b39d 92 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 34 85 2.1E-15 T 13-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 VEA_001562 7310fe1dd2c9a9049d7752bdccd9010e 132 SUPERFAMILY SSF55298 12 127 3.77E-29 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VEA_001562 7310fe1dd2c9a9049d7752bdccd9010e 132 Gene3D G3DSA:3.30.1330.40 10 127 2.4E-28 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VEA_001562 7310fe1dd2c9a9049d7752bdccd9010e 132 Pfam PF01042 Endoribonuclease L-PSP 18 126 2.7E-22 T 13-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VEA_002335 21821a8cf26c9f3374aff1a17183768e 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.887 T 13-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_002335 21821a8cf26c9f3374aff1a17183768e 150 SUPERFAMILY SSF55653 60 148 5.36E-26 T 13-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily VEA_002335 21821a8cf26c9f3374aff1a17183768e 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 3.6E-20 T 13-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002335 21821a8cf26c9f3374aff1a17183768e 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 1.3E-25 T 13-10-2018 IPR020069 Ribosomal protein L9, C-terminal VEA_002335 21821a8cf26c9f3374aff1a17183768e 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 148 7.7E-55 T 13-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_002335 21821a8cf26c9f3374aff1a17183768e 150 Gene3D G3DSA:3.40.5.10 1 50 9.8E-23 T 13-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002335 21821a8cf26c9f3374aff1a17183768e 150 Gene3D G3DSA:3.10.430.100 61 149 3.3E-31 T 13-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily VEA_002335 21821a8cf26c9f3374aff1a17183768e 150 SUPERFAMILY SSF55658 1 57 1.59E-18 T 13-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal VEA_002335 21821a8cf26c9f3374aff1a17183768e 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 13-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002728 20e715ed65e03dac44a9ee73730e4f1c 41 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 1.9E-7 T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002728 20e715ed65e03dac44a9ee73730e4f1c 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 15.816 T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002728 20e715ed65e03dac44a9ee73730e4f1c 41 Pfam PF00444 Ribosomal protein L36 1 40 4.9E-16 T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002728 20e715ed65e03dac44a9ee73730e4f1c 41 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002728 20e715ed65e03dac44a9ee73730e4f1c 41 SUPERFAMILY SSF57840 5 40 1.7E-13 T 13-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002968 1f34f4f18b4731a392497b7bcd06d1ac 398 PRINTS PR00471 Acetate kinase family signature 172 185 7.4E-45 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEA_002968 1f34f4f18b4731a392497b7bcd06d1ac 398 PRINTS PR00471 Acetate kinase family signature 377 389 7.4E-45 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEA_002968 1f34f4f18b4731a392497b7bcd06d1ac 398 PRINTS PR00471 Acetate kinase family signature 298 311 7.4E-45 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEA_002968 1f34f4f18b4731a392497b7bcd06d1ac 398 PRINTS PR00471 Acetate kinase family signature 321 337 7.4E-45 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEA_002968 1f34f4f18b4731a392497b7bcd06d1ac 398 PRINTS PR00471 Acetate kinase family signature 5 16 7.4E-45 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEA_002968 1f34f4f18b4731a392497b7bcd06d1ac 398 PRINTS PR00471 Acetate kinase family signature 202 223 7.4E-45 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEA_002968 1f34f4f18b4731a392497b7bcd06d1ac 398 Hamap MF_00020 Acetate kinase [ackA]. 1 398 188.556 T 13-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEA_002968 1f34f4f18b4731a392497b7bcd06d1ac 398 PIRSF PIRSF000722 1 397 6.5E-147 T 13-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEA_002968 1f34f4f18b4731a392497b7bcd06d1ac 398 Gene3D G3DSA:3.30.420.40 195 397 5.1E-83 T 13-10-2018 VEA_002968 1f34f4f18b4731a392497b7bcd06d1ac 398 Gene3D G3DSA:3.30.420.40 2 194 5.2E-74 T 13-10-2018 VEA_002968 1f34f4f18b4731a392497b7bcd06d1ac 398 SUPERFAMILY SSF53067 156 395 5.58E-85 T 13-10-2018 VEA_002968 1f34f4f18b4731a392497b7bcd06d1ac 398 Pfam PF00871 Acetokinase family 5 390 2.0E-167 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEA_002968 1f34f4f18b4731a392497b7bcd06d1ac 398 SUPERFAMILY SSF53067 3 195 1.68E-64 T 13-10-2018 VEA_002968 1f34f4f18b4731a392497b7bcd06d1ac 398 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 13-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEA_002968 1f34f4f18b4731a392497b7bcd06d1ac 398 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 4.4E-174 T 13-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEA_002968 1f34f4f18b4731a392497b7bcd06d1ac 398 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 13-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEA_003419 189f02a6875b8bc0df7b5efcab706cdf 306 Pfam PF10414 Sirohaem synthase dimerisation region 151 204 2.8E-13 T 13-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VEA_003419 189f02a6875b8bc0df7b5efcab706cdf 306 SUPERFAMILY SSF75615 109 207 3.14E-26 T 13-10-2018 VEA_003419 189f02a6875b8bc0df7b5efcab706cdf 306 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 200 1.8E-62 T 13-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VEA_003419 189f02a6875b8bc0df7b5efcab706cdf 306 Gene3D G3DSA:3.40.50.720 1 113 5.2E-35 T 13-10-2018 VEA_003419 189f02a6875b8bc0df7b5efcab706cdf 306 SUPERFAMILY SSF51735 1 113 1.14E-26 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_003419 189f02a6875b8bc0df7b5efcab706cdf 306 Gene3D G3DSA:3.30.160.110 114 149 1.8E-14 T 13-10-2018 VEA_003419 189f02a6875b8bc0df7b5efcab706cdf 306 Gene3D G3DSA:1.10.8.210 150 211 1.5E-10 T 13-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VEA_003419 189f02a6875b8bc0df7b5efcab706cdf 306 Pfam PF13241 Putative NAD(P)-binding 6 116 1.9E-31 T 13-10-2018 VEA_003419 189f02a6875b8bc0df7b5efcab706cdf 306 Pfam PF14824 Sirohaem biosynthesis protein central 120 146 2.4E-7 T 13-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VEA_002511 7c48cd7371f286bce39b1d857dba2b54 158 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 13-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VEA_002511 7c48cd7371f286bce39b1d857dba2b54 158 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 157 2.8E-69 T 13-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VEA_002511 7c48cd7371f286bce39b1d857dba2b54 158 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 36.075 T 13-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VEA_002511 7c48cd7371f286bce39b1d857dba2b54 158 Gene3D G3DSA:3.30.1330.50 1 158 4.5E-70 T 13-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VEA_002511 7c48cd7371f286bce39b1d857dba2b54 158 Pfam PF02542 YgbB family 2 155 5.1E-66 T 13-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VEA_002511 7c48cd7371f286bce39b1d857dba2b54 158 SUPERFAMILY SSF69765 1 157 7.33E-66 T 13-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VEA_002869 6efbea37a96db3e1711cefae9d1afc12 672 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 266 666 2.3E-154 T 13-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 VEA_002869 6efbea37a96db3e1711cefae9d1afc12 672 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 5 661 27.625 T 13-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 VEA_002869 6efbea37a96db3e1711cefae9d1afc12 672 Gene3D G3DSA:3.50.50.60 265 663 2.8E-132 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_002869 6efbea37a96db3e1711cefae9d1afc12 672 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 116 242 1.4E-47 T 13-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 VEA_002869 6efbea37a96db3e1711cefae9d1afc12 672 Pfam PF01266 FAD dependent oxidoreductase 266 636 1.8E-43 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VEA_002869 6efbea37a96db3e1711cefae9d1afc12 672 SUPERFAMILY SSF51905 266 663 9.71E-29 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_002869 6efbea37a96db3e1711cefae9d1afc12 672 Gene3D G3DSA:3.30.9.10 349 573 2.8E-132 T 13-10-2018 VEA_002869 6efbea37a96db3e1711cefae9d1afc12 672 Gene3D G3DSA:3.40.50.150 7 252 2.6E-108 T 13-10-2018 VEA_001872 0434cb4c7b996d9426224734d84f1d20 163 Gene3D G3DSA:1.10.287.180 1 76 7.5E-28 T 13-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 VEA_001872 0434cb4c7b996d9426224734d84f1d20 163 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 6.7E-23 T 13-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VEA_001872 0434cb4c7b996d9426224734d84f1d20 163 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 156 5.2E-23 T 13-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VEA_001872 0434cb4c7b996d9426224734d84f1d20 163 SUPERFAMILY SSF46557 3 78 1.44E-25 T 13-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 VEA_001872 0434cb4c7b996d9426224734d84f1d20 163 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 157 49.854 T 13-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 VEA_001872 0434cb4c7b996d9426224734d84f1d20 163 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 158 3.2E-72 T 13-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 VEA_001872 0434cb4c7b996d9426224734d84f1d20 163 Gene3D G3DSA:3.10.50.30 77 159 1.6E-31 T 13-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 VEA_001872 0434cb4c7b996d9426224734d84f1d20 163 PIRSF PIRSF006092 2 158 4.5E-43 T 13-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 VEA_001872 0434cb4c7b996d9426224734d84f1d20 163 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 13-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VEA_001872 0434cb4c7b996d9426224734d84f1d20 163 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 13-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VEA_001872 0434cb4c7b996d9426224734d84f1d20 163 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 26.134 T 13-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 VEA_001872 0434cb4c7b996d9426224734d84f1d20 163 SUPERFAMILY SSF54534 80 156 5.1E-19 T 13-10-2018 VEA_004033 d0bee4e020a2e00cb9f93da0513602be 435 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 85 424 2.9E-102 T 13-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 VEA_004033 d0bee4e020a2e00cb9f93da0513602be 435 Pfam PF00425 chorismate binding enzyme 164 417 3.3E-71 T 13-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal VEA_004033 d0bee4e020a2e00cb9f93da0513602be 435 Gene3D G3DSA:3.60.120.10 1 429 2.1E-127 T 13-10-2018 IPR005801 ADC synthase GO:0009058 VEA_004033 d0bee4e020a2e00cb9f93da0513602be 435 Hamap MF_01935 Isochorismate synthase MenF [menF]. 3 427 30.911 T 13-10-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 VEA_004033 d0bee4e020a2e00cb9f93da0513602be 435 SUPERFAMILY SSF56322 29 425 1.19E-100 T 13-10-2018 IPR005801 ADC synthase GO:0009058 VEA_002578 4ff4fda028195e340897fe5aeb222c5c 802 SUPERFAMILY SSF74650 1 269 5.34E-83 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VEA_002578 4ff4fda028195e340897fe5aeb222c5c 802 Gene3D G3DSA:2.60.420.10 721 801 4.4E-29 T 13-10-2018 VEA_002578 4ff4fda028195e340897fe5aeb222c5c 802 Pfam PF06165 Glycosyltransferase family 36 21 267 2.3E-85 T 13-10-2018 IPR010383 Glycosyl hydrolase 94 VEA_002578 4ff4fda028195e340897fe5aeb222c5c 802 SUPERFAMILY SSF48208 274 801 2.21E-110 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VEA_002578 4ff4fda028195e340897fe5aeb222c5c 802 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 296 728 5.7E-210 T 13-10-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain VEA_002578 4ff4fda028195e340897fe5aeb222c5c 802 Gene3D G3DSA:2.70.98.40 1 302 1.1E-116 T 13-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily VEA_002578 4ff4fda028195e340897fe5aeb222c5c 802 Gene3D G3DSA:1.50.10.10 311 720 2.1E-135 T 13-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 VEA_002578 4ff4fda028195e340897fe5aeb222c5c 802 SMART SM01068 1 63 2.3E-20 T 13-10-2018 IPR009342 Putative carbohydrate binding domain VEA_001919 6866bed11441b373e808f75f6085cece 354 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 253 265 - T 13-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VEA_001919 6866bed11441b373e808f75f6085cece 354 Gene3D G3DSA:3.20.20.70 2 338 3.8E-148 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_001919 6866bed11441b373e808f75f6085cece 354 SMART SM01004 10 334 4.0E-246 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VEA_001919 6866bed11441b373e808f75f6085cece 354 Pfam PF00490 Delta-aminolevulinic acid dehydratase 13 333 4.0E-142 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VEA_001919 6866bed11441b373e808f75f6085cece 354 PIRSF PIRSF001415 3 337 7.7E-153 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VEA_001919 6866bed11441b373e808f75f6085cece 354 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 161 180 1.8E-57 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VEA_001919 6866bed11441b373e808f75f6085cece 354 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 253 269 1.8E-57 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VEA_001919 6866bed11441b373e808f75f6085cece 354 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 199 218 1.8E-57 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VEA_001919 6866bed11441b373e808f75f6085cece 354 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 130 144 1.8E-57 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VEA_001919 6866bed11441b373e808f75f6085cece 354 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 278 293 1.8E-57 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VEA_001919 6866bed11441b373e808f75f6085cece 354 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 308 327 1.8E-57 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VEA_001919 6866bed11441b373e808f75f6085cece 354 SUPERFAMILY SSF51569 8 336 1.08E-145 T 13-10-2018 VEA_000038 875ed20291a8f2de177f88d4e3562876 99 SUPERFAMILY SSF54292 20 97 3.41E-19 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VEA_000038 875ed20291a8f2de177f88d4e3562876 99 Gene3D G3DSA:3.10.20.440 7 99 2.9E-22 T 13-10-2018 VEA_000038 875ed20291a8f2de177f88d4e3562876 99 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 18 98 4.4E-28 T 13-10-2018 VEA_000650 872b0012382d88c146d628f06b22e8e8 292 Gene3D G3DSA:1.10.10.10 198 288 7.0E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000650 872b0012382d88c146d628f06b22e8e8 292 SMART SM00421 226 283 4.3E-19 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_000650 872b0012382d88c146d628f06b22e8e8 292 Pfam PF00196 Bacterial regulatory proteins, luxR family 228 282 3.0E-16 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_000650 872b0012382d88c146d628f06b22e8e8 292 SUPERFAMILY SSF46894 218 286 1.46E-17 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEA_000650 872b0012382d88c146d628f06b22e8e8 292 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 229 243 1.6E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_000650 872b0012382d88c146d628f06b22e8e8 292 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 259 271 1.6E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_000650 872b0012382d88c146d628f06b22e8e8 292 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 243 259 1.6E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_002237 80be5345bd64b4429dd3ce2a17a9276b 599 Pfam PF00890 FAD binding domain 7 397 1.3E-112 T 13-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEA_002237 80be5345bd64b4429dd3ce2a17a9276b 599 SUPERFAMILY SSF51905 3 441 1.77E-74 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_002237 80be5345bd64b4429dd3ce2a17a9276b 599 Gene3D G3DSA:4.10.80.40 543 577 1.0E-16 T 13-10-2018 VEA_002237 80be5345bd64b4429dd3ce2a17a9276b 599 PIRSF PIRSF000171 1 574 2.4E-45 T 13-10-2018 VEA_002237 80be5345bd64b4429dd3ce2a17a9276b 599 Gene3D G3DSA:3.50.50.60 7 409 2.3E-161 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_002237 80be5345bd64b4429dd3ce2a17a9276b 599 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 8.4E-5 T 13-10-2018 VEA_002237 80be5345bd64b4429dd3ce2a17a9276b 599 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 8.4E-5 T 13-10-2018 VEA_002237 80be5345bd64b4429dd3ce2a17a9276b 599 SUPERFAMILY SSF56425 227 358 6.58E-41 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEA_002237 80be5345bd64b4429dd3ce2a17a9276b 599 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 1.5E-236 T 13-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEA_002237 80be5345bd64b4429dd3ce2a17a9276b 599 Gene3D G3DSA:1.20.58.100 424 538 8.9E-36 T 13-10-2018 VEA_002237 80be5345bd64b4429dd3ce2a17a9276b 599 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 13-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEA_002237 80be5345bd64b4429dd3ce2a17a9276b 599 Gene3D G3DSA:3.90.700.10 237 363 2.3E-161 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEA_002237 80be5345bd64b4429dd3ce2a17a9276b 599 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.5E-8 T 13-10-2018 VEA_002237 80be5345bd64b4429dd3ce2a17a9276b 599 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 1.5E-8 T 13-10-2018 VEA_002237 80be5345bd64b4429dd3ce2a17a9276b 599 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 7.0E-38 T 13-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEA_002237 80be5345bd64b4429dd3ce2a17a9276b 599 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 13-10-2018 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 VEA_002237 80be5345bd64b4429dd3ce2a17a9276b 599 SUPERFAMILY SSF46977 444 581 9.42E-44 T 13-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEA_003760 4739f683c64844703a0d2da9b97e6522 259 Gene3D G3DSA:1.10.10.10 1 54 6.9E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_003760 4739f683c64844703a0d2da9b97e6522 259 Pfam PF01418 Helix-turn-helix domain, rpiR family 2 51 2.9E-18 T 13-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VEA_003760 4739f683c64844703a0d2da9b97e6522 259 SUPERFAMILY SSF53697 68 253 7.53E-40 T 13-10-2018 VEA_003760 4739f683c64844703a0d2da9b97e6522 259 Gene3D G3DSA:3.40.50.10490 69 251 2.3E-39 T 13-10-2018 VEA_003760 4739f683c64844703a0d2da9b97e6522 259 SUPERFAMILY SSF46689 2 55 1.27E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_003760 4739f683c64844703a0d2da9b97e6522 259 Pfam PF01380 SIS domain 99 227 4.9E-25 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VEA_001423 ff821af55059fe8faf01aac4b3055ce8 623 Gene3D G3DSA:1.10.287.950 291 623 3.8E-71 T 13-10-2018 VEA_001423 ff821af55059fe8faf01aac4b3055ce8 623 SUPERFAMILY SSF58104 314 623 3.53E-75 T 13-10-2018 VEA_001423 ff821af55059fe8faf01aac4b3055ce8 623 Pfam PF02743 Cache domain 33 255 1.9E-34 T 13-10-2018 IPR033479 Double Cache domain 1 VEA_001423 ff821af55059fe8faf01aac4b3055ce8 623 SMART SM00304 374 441 110.0 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_001423 ff821af55059fe8faf01aac4b3055ce8 623 SMART SM00304 292 346 2.8E-11 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_001423 ff821af55059fe8faf01aac4b3055ce8 623 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 433 589 1.2E-42 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_001423 ff821af55059fe8faf01aac4b3055ce8 623 Pfam PF00672 HAMP domain 292 343 7.8E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_001423 ff821af55059fe8faf01aac4b3055ce8 623 SUPERFAMILY SSF103190 50 184 8.63E-19 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VEA_001423 ff821af55059fe8faf01aac4b3055ce8 623 Gene3D G3DSA:3.30.450.20 62 173 3.3E-70 T 13-10-2018 VEA_001423 ff821af55059fe8faf01aac4b3055ce8 623 Gene3D G3DSA:3.30.450.20 49 265 3.3E-70 T 13-10-2018 VEA_001423 ff821af55059fe8faf01aac4b3055ce8 623 SMART SM00283 361 622 1.6E-70 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_001238 524023450bef02b622812e012514db06 284 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 257 268 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VEA_001238 524023450bef02b622812e012514db06 284 Gene3D G3DSA:3.30.70.20 219 281 3.1E-7 T 13-10-2018 VEA_001238 524023450bef02b622812e012514db06 284 SUPERFAMILY SSF54862 94 278 4.92E-20 T 13-10-2018 VEA_001238 524023450bef02b622812e012514db06 284 Pfam PF12801 4Fe-4S binding domain 82 127 1.1E-13 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEA_001238 524023450bef02b622812e012514db06 284 Pfam PF12801 4Fe-4S binding domain 174 211 3.0E-5 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEA_001238 524023450bef02b622812e012514db06 284 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 25 275 9.2E-111 T 13-10-2018 IPR011886 Ferredoxin-type protein, NapH/MauN family VEA_001238 524023450bef02b622812e012514db06 284 Pfam PF13187 4Fe-4S dicluster domain 224 270 3.7E-7 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEA_004110 67853663cec8bd65afd3b04b5f2f0c6a 388 Gene3D G3DSA:3.30.470.20 1 234 4.6E-92 T 13-10-2018 VEA_004110 67853663cec8bd65afd3b04b5f2f0c6a 388 Pfam PF00549 CoA-ligase 262 382 9.4E-25 T 13-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VEA_004110 67853663cec8bd65afd3b04b5f2f0c6a 388 PIRSF PIRSF001554 1 388 5.3E-154 T 13-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VEA_004110 67853663cec8bd65afd3b04b5f2f0c6a 388 Gene3D G3DSA:3.40.50.261 240 388 1.7E-56 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VEA_004110 67853663cec8bd65afd3b04b5f2f0c6a 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 13-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VEA_004110 67853663cec8bd65afd3b04b5f2f0c6a 388 SUPERFAMILY SSF56059 1 238 2.23E-79 T 13-10-2018 VEA_004110 67853663cec8bd65afd3b04b5f2f0c6a 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.249 T 13-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VEA_004110 67853663cec8bd65afd3b04b5f2f0c6a 388 SUPERFAMILY SSF52210 239 385 4.58E-54 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VEA_004110 67853663cec8bd65afd3b04b5f2f0c6a 388 Gene3D G3DSA:3.30.1490.20 21 104 4.6E-92 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VEA_004110 67853663cec8bd65afd3b04b5f2f0c6a 388 Pfam PF08442 ATP-grasp domain 2 203 2.5E-79 T 13-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VEA_004110 67853663cec8bd65afd3b04b5f2f0c6a 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 1.3E-173 T 13-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VEA_003132 066b55e9dab881f9ff4d6205aac67228 363 PIRSF PIRSF039026 3 362 1.1E-142 T 13-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like VEA_003132 066b55e9dab881f9ff4d6205aac67228 363 Gene3D G3DSA:3.40.190.10 156 327 3.0E-118 T 13-10-2018 VEA_003132 066b55e9dab881f9ff4d6205aac67228 363 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 40 327 5.6E-71 T 13-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VEA_003132 066b55e9dab881f9ff4d6205aac67228 363 Gene3D G3DSA:3.40.190.170 38 348 3.0E-118 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VEA_001618 c928001cb5215d241ca78880112d833d 203 SMART SM01207 10 185 5.3E-82 T 13-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 VEA_001618 c928001cb5215d241ca78880112d833d 203 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 18.713 T 13-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 VEA_001618 c928001cb5215d241ca78880112d833d 203 Pfam PF02660 Glycerol-3-phosphate acyltransferase 12 184 5.4E-49 T 13-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 VEA_001618 c928001cb5215d241ca78880112d833d 203 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 2 194 9.0E-73 T 13-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 VEA_000796 ba2709d46cbef533e38eb2b5c8c8ab9d 444 PRINTS PR00147 DNA photolyase signature 341 359 3.0E-11 T 13-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VEA_000796 ba2709d46cbef533e38eb2b5c8c8ab9d 444 PRINTS PR00147 DNA photolyase signature 380 394 3.0E-11 T 13-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VEA_000796 ba2709d46cbef533e38eb2b5c8c8ab9d 444 PRINTS PR00147 DNA photolyase signature 321 337 3.0E-11 T 13-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VEA_000796 ba2709d46cbef533e38eb2b5c8c8ab9d 444 Gene3D G3DSA:1.10.579.10 297 440 8.4E-51 T 13-10-2018 VEA_000796 ba2709d46cbef533e38eb2b5c8c8ab9d 444 SUPERFAMILY SSF52425 3 194 1.96E-38 T 13-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 VEA_000796 ba2709d46cbef533e38eb2b5c8c8ab9d 444 Gene3D G3DSA:1.25.40.80 135 294 3.2E-45 T 13-10-2018 VEA_000796 ba2709d46cbef533e38eb2b5c8c8ab9d 444 SUPERFAMILY SSF48173 197 421 3.66E-69 T 13-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 VEA_000796 ba2709d46cbef533e38eb2b5c8c8ab9d 444 Gene3D G3DSA:3.40.50.620 2 134 1.7E-23 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_000796 ba2709d46cbef533e38eb2b5c8c8ab9d 444 Pfam PF03441 FAD binding domain of DNA photolyase 274 417 4.8E-41 T 13-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 VEA_000796 ba2709d46cbef533e38eb2b5c8c8ab9d 444 Pfam PF00875 DNA photolyase 7 163 1.7E-25 T 13-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 VEA_000796 ba2709d46cbef533e38eb2b5c8c8ab9d 444 TIGRFAM TIGR02765 crypto_DASH: cryptochrome, DASH family 4 419 5.2E-175 T 13-10-2018 IPR014133 Cryptochrome DASH GO:0003913|GO:0006281 VEA_001584 dd7e8374ac48e789b271d678c6c2e59a 327 Gene3D G3DSA:3.40.50.920 198 324 1.2E-41 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VEA_001584 dd7e8374ac48e789b271d678c6c2e59a 327 Gene3D G3DSA:3.40.50.970 1 192 3.7E-74 T 13-10-2018 VEA_001584 dd7e8374ac48e789b271d678c6c2e59a 327 SUPERFAMILY SSF52518 4 191 6.42E-64 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VEA_001584 dd7e8374ac48e789b271d678c6c2e59a 327 SUPERFAMILY SSF52922 190 323 1.7E-37 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VEA_001584 dd7e8374ac48e789b271d678c6c2e59a 327 Pfam PF02779 Transketolase, pyrimidine binding domain 4 178 4.6E-48 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VEA_001584 dd7e8374ac48e789b271d678c6c2e59a 327 Pfam PF02780 Transketolase, C-terminal domain 198 315 5.4E-36 T 13-10-2018 IPR033248 Transketolase, C-terminal domain VEA_001584 dd7e8374ac48e789b271d678c6c2e59a 327 SMART SM00861 4 179 2.5E-60 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VEA_001323 39d860355453d89d5c27dc7c72b7bb67 726 Pfam PF02706 Chain length determinant protein 23 107 1.3E-9 T 13-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 VEA_001323 39d860355453d89d5c27dc7c72b7bb67 726 Pfam PF13807 G-rich domain on putative tyrosine kinase 396 467 2.6E-10 T 13-10-2018 IPR032807 Tyrosine kinase, G-rich domain VEA_001323 39d860355453d89d5c27dc7c72b7bb67 726 Pfam PF13614 AAA domain 552 677 2.9E-14 T 13-10-2018 IPR025669 AAA domain VEA_001323 39d860355453d89d5c27dc7c72b7bb67 726 SUPERFAMILY SSF52540 540 717 2.66E-32 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001323 39d860355453d89d5c27dc7c72b7bb67 726 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 522 718 3.8E-43 T 13-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 VEA_001323 39d860355453d89d5c27dc7c72b7bb67 726 Gene3D G3DSA:3.40.50.300 464 726 9.0E-66 T 13-10-2018 VEA_001848 3da4b9bda0d8553e6d4888f9203519f6 223 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 53 218 1.1E-29 T 13-10-2018 IPR000160 GGDEF domain VEA_001848 3da4b9bda0d8553e6d4888f9203519f6 223 SMART SM00267 50 220 8.9E-29 T 13-10-2018 IPR000160 GGDEF domain VEA_001848 3da4b9bda0d8553e6d4888f9203519f6 223 SUPERFAMILY SSF55073 62 217 9.42E-31 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_001848 3da4b9bda0d8553e6d4888f9203519f6 223 Pfam PF00990 Diguanylate cyclase, GGDEF domain 59 215 1.7E-33 T 13-10-2018 IPR000160 GGDEF domain VEA_001848 3da4b9bda0d8553e6d4888f9203519f6 223 Gene3D G3DSA:3.30.70.270 56 221 1.0E-35 T 13-10-2018 VEA_001266 b6ff4903efd7e9a9808e088b236af728 678 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 499 667 7.7E-39 T 13-10-2018 IPR000160 GGDEF domain VEA_001266 b6ff4903efd7e9a9808e088b236af728 678 Gene3D G3DSA:3.30.450.40 145 305 4.7E-8 T 13-10-2018 IPR029016 GAF-like domain superfamily VEA_001266 b6ff4903efd7e9a9808e088b236af728 678 Gene3D G3DSA:3.30.70.270 488 671 2.7E-46 T 13-10-2018 VEA_001266 b6ff4903efd7e9a9808e088b236af728 678 Pfam PF00990 Diguanylate cyclase, GGDEF domain 504 664 1.1E-36 T 13-10-2018 IPR000160 GGDEF domain VEA_001266 b6ff4903efd7e9a9808e088b236af728 678 SMART SM00267 492 669 1.5E-47 T 13-10-2018 IPR000160 GGDEF domain VEA_001266 b6ff4903efd7e9a9808e088b236af728 678 SUPERFAMILY SSF55781 141 301 2.18E-6 T 13-10-2018 VEA_001266 b6ff4903efd7e9a9808e088b236af728 678 SUPERFAMILY SSF55781 312 483 2.84E-5 T 13-10-2018 VEA_001266 b6ff4903efd7e9a9808e088b236af728 678 SUPERFAMILY SSF55073 508 670 4.16E-39 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_002101 b34a570d622422a165014f3ba0c44a20 89 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 13-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VEA_002101 b34a570d622422a165014f3ba0c44a20 89 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 78 1.3E-14 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VEA_002101 b34a570d622422a165014f3ba0c44a20 89 Gene3D G3DSA:3.10.20.30 1 89 2.1E-23 T 13-10-2018 IPR012675 Beta-grasp domain superfamily VEA_002101 b34a570d622422a165014f3ba0c44a20 89 SUPERFAMILY SSF54292 1 87 2.75E-26 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VEA_001186 9b6a4ad539130b14ecf06cb72906c185 569 PIRSF PIRSF004862 11 562 1.2E-125 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VEA_001186 9b6a4ad539130b14ecf06cb72906c185 569 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 28 560 1.8E-71 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VEA_001186 9b6a4ad539130b14ecf06cb72906c185 569 Pfam PF01514 Secretory protein of YscJ/FliF family 39 230 7.7E-64 T 13-10-2018 IPR006182 Secretory protein YscJ/FliF VEA_001186 9b6a4ad539130b14ecf06cb72906c185 569 PRINTS PR01009 Flagellar M-ring protein signature 130 148 2.4E-26 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VEA_001186 9b6a4ad539130b14ecf06cb72906c185 569 PRINTS PR01009 Flagellar M-ring protein signature 206 224 2.4E-26 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VEA_001186 9b6a4ad539130b14ecf06cb72906c185 569 PRINTS PR01009 Flagellar M-ring protein signature 277 295 2.4E-26 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VEA_001186 9b6a4ad539130b14ecf06cb72906c185 569 PRINTS PR01009 Flagellar M-ring protein signature 162 176 2.4E-26 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VEA_001186 9b6a4ad539130b14ecf06cb72906c185 569 PRINTS PR01009 Flagellar M-ring protein signature 349 373 2.4E-26 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VEA_001186 9b6a4ad539130b14ecf06cb72906c185 569 Pfam PF08345 Flagellar M-ring protein C-terminal 264 419 4.3E-38 T 13-10-2018 IPR013556 Flagellar M-ring C-terminal VEA_001186 9b6a4ad539130b14ecf06cb72906c185 569 Gene3D G3DSA:3.30.300.30 128 230 1.3E-12 T 13-10-2018 VEA_003825 ed4549e6b4c309f86bacd983bae97b56 820 Pfam PF01568 Molydopterin dinucleotide binding domain 676 796 1.8E-24 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VEA_003825 ed4549e6b4c309f86bacd983bae97b56 820 Gene3D G3DSA:2.40.40.20 649 813 1.3E-48 T 13-10-2018 VEA_003825 ed4549e6b4c309f86bacd983bae97b56 820 SUPERFAMILY SSF53706 40 660 1.44E-167 T 13-10-2018 VEA_003825 ed4549e6b4c309f86bacd983bae97b56 820 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 716 743 - T 13-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 VEA_003825 ed4549e6b4c309f86bacd983bae97b56 820 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 28 2.1E-4 T 13-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VEA_003825 ed4549e6b4c309f86bacd983bae97b56 820 Gene3D G3DSA:3.40.50.740 87 569 2.4E-240 T 13-10-2018 VEA_003825 ed4549e6b4c309f86bacd983bae97b56 820 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 503 520 - T 13-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 VEA_003825 ed4549e6b4c309f86bacd983bae97b56 820 Pfam PF00384 Molybdopterin oxidoreductase 87 560 7.2E-78 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEA_003825 ed4549e6b4c309f86bacd983bae97b56 820 TIGRFAM TIGR02164 torA: trimethylamine-N-oxide reductase TorA 1 819 0.0 T 13-10-2018 IPR011887 Trimethylamine-N-oxide reductase TorA GO:0030151|GO:0042597|GO:0050626 VEA_003825 ed4549e6b4c309f86bacd983bae97b56 820 Gene3D G3DSA:3.90.55.10 82 615 2.4E-240 T 13-10-2018 VEA_003825 ed4549e6b4c309f86bacd983bae97b56 820 Gene3D G3DSA:3.40.228.10 179 641 2.4E-240 T 13-10-2018 VEA_003825 ed4549e6b4c309f86bacd983bae97b56 820 SUPERFAMILY SSF50692 669 817 1.63E-42 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VEA_003802 948a79973f246c7bb45b702c060cdbdc 230 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 47 61 - T 13-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEA_003802 948a79973f246c7bb45b702c060cdbdc 230 Gene3D G3DSA:3.30.2350.10 1 196 9.1E-48 T 13-10-2018 VEA_003802 948a79973f246c7bb45b702c060cdbdc 230 TIGRFAM TIGR01621 RluA-like: pseudouridine synthase Rlu family protein, TIGR01621 1 220 1.2E-108 T 13-10-2018 IPR006508 Pseudouridine synthase, RluA-like VEA_003802 948a79973f246c7bb45b702c060cdbdc 230 SUPERFAMILY SSF55120 2 199 6.56E-47 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEA_003802 948a79973f246c7bb45b702c060cdbdc 230 Pfam PF00849 RNA pseudouridylate synthase 10 153 2.1E-26 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEA_002490 d00404c52a93903b915cb32acbcc47ea 561 SUPERFAMILY SSF56425 262 377 1.21E-42 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEA_002490 d00404c52a93903b915cb32acbcc47ea 561 SUPERFAMILY SSF51905 25 471 3.94E-76 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_002490 d00404c52a93903b915cb32acbcc47ea 561 Pfam PF02910 Fumarate reductase flavoprotein C-term 465 546 1.6E-14 T 13-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEA_002490 d00404c52a93903b915cb32acbcc47ea 561 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 31 544 4.2E-210 T 13-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 VEA_002490 d00404c52a93903b915cb32acbcc47ea 561 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 35 54 4.3E-8 T 13-10-2018 VEA_002490 d00404c52a93903b915cb32acbcc47ea 561 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 379 401 4.3E-8 T 13-10-2018 VEA_002490 d00404c52a93903b915cb32acbcc47ea 561 SUPERFAMILY SSF46977 449 549 2.09E-32 T 13-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEA_002490 d00404c52a93903b915cb32acbcc47ea 561 PIRSF PIRSF000171 23 289 3.1E-29 T 13-10-2018 VEA_002490 d00404c52a93903b915cb32acbcc47ea 561 PIRSF PIRSF000171 360 558 9.1E-13 T 13-10-2018 VEA_002490 d00404c52a93903b915cb32acbcc47ea 561 Gene3D G3DSA:3.50.50.60 34 428 5.2E-155 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_002490 d00404c52a93903b915cb32acbcc47ea 561 Gene3D G3DSA:1.20.58.100 449 561 6.9E-45 T 13-10-2018 VEA_002490 d00404c52a93903b915cb32acbcc47ea 561 Gene3D G3DSA:3.90.700.10 272 382 5.2E-155 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEA_002490 d00404c52a93903b915cb32acbcc47ea 561 Pfam PF00890 FAD binding domain 34 416 7.9E-101 T 13-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEA_003958 4a1fab5c7d11511cfcd9541fd6426540 72 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 13-10-2018 IPR019844 Cold-shock conserved site VEA_003958 4a1fab5c7d11511cfcd9541fd6426540 72 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 68 9.6E-41 T 13-10-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355 VEA_003958 4a1fab5c7d11511cfcd9541fd6426540 72 PRINTS PR00050 Cold shock protein signature 40 58 8.3E-15 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEA_003958 4a1fab5c7d11511cfcd9541fd6426540 72 PRINTS PR00050 Cold shock protein signature 4 19 8.3E-15 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEA_003958 4a1fab5c7d11511cfcd9541fd6426540 72 PRINTS PR00050 Cold shock protein signature 25 34 8.3E-15 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEA_003958 4a1fab5c7d11511cfcd9541fd6426540 72 PIRSF PIRSF002599 1 72 1.0E-22 T 13-10-2018 IPR012156 Cold shock, CspA GO:0003676 VEA_003958 4a1fab5c7d11511cfcd9541fd6426540 72 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 3.0E-28 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEA_003958 4a1fab5c7d11511cfcd9541fd6426540 72 SUPERFAMILY SSF50249 1 67 6.0E-23 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_003958 4a1fab5c7d11511cfcd9541fd6426540 72 SMART SM00357 3 67 4.3E-25 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 VEA_003958 4a1fab5c7d11511cfcd9541fd6426540 72 Gene3D G3DSA:2.40.50.140 1 65 8.4E-26 T 13-10-2018 VEA_004491 b54443b4a947d465e415bb0c418fde32 398 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 22 390 41.387 T 13-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEA_004491 b54443b4a947d465e415bb0c418fde32 398 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 339 363 - T 13-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEA_004491 b54443b4a947d465e415bb0c418fde32 398 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 24 380 1.4E-128 T 13-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEA_004491 b54443b4a947d465e415bb0c418fde32 398 Pfam PF01098 Cell cycle protein 26 380 2.4E-113 T 13-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEA_003955 dcb4525c3e58b45274dc0b85d99859d5 72 SMART SM00316 4 72 4.8E-6 T 13-10-2018 IPR022967 RNA-binding domain, S1 VEA_003955 dcb4525c3e58b45274dc0b85d99859d5 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.7E-27 T 13-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 VEA_003955 dcb4525c3e58b45274dc0b85d99859d5 72 SUPERFAMILY SSF50249 1 70 9.43E-29 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_003955 dcb4525c3e58b45274dc0b85d99859d5 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 1.5E-38 T 13-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 VEA_003955 dcb4525c3e58b45274dc0b85d99859d5 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.238 T 13-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 VEA_003955 dcb4525c3e58b45274dc0b85d99859d5 72 Gene3D G3DSA:2.40.50.140 1 72 8.4E-37 T 13-10-2018 VEA_000235 7438a78f59cd3ec1ee6c913bda79b5bd 133 Gene3D G3DSA:3.10.180.10 1 131 9.7E-34 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEA_000235 7438a78f59cd3ec1ee6c913bda79b5bd 133 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 128 5.0E-13 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VEA_000235 7438a78f59cd3ec1ee6c913bda79b5bd 133 SUPERFAMILY SSF54593 9 132 2.01E-23 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEA_000617 c3596f7325add08749e5b98acfb16d7b 424 Gene3D G3DSA:3.90.550.10 35 264 9.1E-30 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEA_000617 c3596f7325add08749e5b98acfb16d7b 424 Pfam PF13641 Glycosyltransferase like family 2 47 280 1.3E-16 T 13-10-2018 VEA_000617 c3596f7325add08749e5b98acfb16d7b 424 SUPERFAMILY SSF53448 42 329 1.41E-37 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEA_003744 5fd96a19f7cd1d9d2bf44c044a7c6d60 319 SUPERFAMILY SSF51905 2 313 5.37E-52 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_003744 5fd96a19f7cd1d9d2bf44c044a7c6d60 319 Gene3D G3DSA:3.50.50.60 10 312 2.8E-127 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_003744 5fd96a19f7cd1d9d2bf44c044a7c6d60 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 4.0E-76 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEA_003744 5fd96a19f7cd1d9d2bf44c044a7c6d60 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 4.0E-76 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEA_003744 5fd96a19f7cd1d9d2bf44c044a7c6d60 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 4.0E-76 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEA_003744 5fd96a19f7cd1d9d2bf44c044a7c6d60 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 4.0E-76 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEA_003744 5fd96a19f7cd1d9d2bf44c044a7c6d60 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 4.0E-76 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEA_003744 5fd96a19f7cd1d9d2bf44c044a7c6d60 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 4.0E-76 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEA_003744 5fd96a19f7cd1d9d2bf44c044a7c6d60 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 4.0E-76 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEA_003744 5fd96a19f7cd1d9d2bf44c044a7c6d60 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 4.0E-76 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEA_003744 5fd96a19f7cd1d9d2bf44c044a7c6d60 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 4.0E-76 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VEA_003744 5fd96a19f7cd1d9d2bf44c044a7c6d60 319 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 13-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 VEA_003744 5fd96a19f7cd1d9d2bf44c044a7c6d60 319 Gene3D G3DSA:3.50.50.60 118 244 2.8E-127 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_003744 5fd96a19f7cd1d9d2bf44c044a7c6d60 319 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 2.3E-45 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VEA_003744 5fd96a19f7cd1d9d2bf44c044a7c6d60 319 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 3.8E-124 T 13-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 VEA_003744 5fd96a19f7cd1d9d2bf44c044a7c6d60 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.2E-38 T 13-10-2018 VEA_003744 5fd96a19f7cd1d9d2bf44c044a7c6d60 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 2.2E-38 T 13-10-2018 VEA_003744 5fd96a19f7cd1d9d2bf44c044a7c6d60 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 2.2E-38 T 13-10-2018 VEA_003744 5fd96a19f7cd1d9d2bf44c044a7c6d60 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 2.2E-38 T 13-10-2018 VEA_003744 5fd96a19f7cd1d9d2bf44c044a7c6d60 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 2.2E-38 T 13-10-2018 VEA_004003 cd8b8b57cc379324fb880d30ad1f3280 116 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 13-10-2018 IPR019808 Histidine triad, conserved site VEA_004003 cd8b8b57cc379324fb880d30ad1f3280 116 PRINTS PR00332 Histidine triad family signature 6 22 5.2E-19 T 13-10-2018 IPR001310 Histidine triad (HIT) protein VEA_004003 cd8b8b57cc379324fb880d30ad1f3280 116 PRINTS PR00332 Histidine triad family signature 95 105 5.2E-19 T 13-10-2018 IPR001310 Histidine triad (HIT) protein VEA_004003 cd8b8b57cc379324fb880d30ad1f3280 116 PRINTS PR00332 Histidine triad family signature 27 45 5.2E-19 T 13-10-2018 IPR001310 Histidine triad (HIT) protein VEA_004003 cd8b8b57cc379324fb880d30ad1f3280 116 Gene3D G3DSA:3.30.428.10 1 111 1.3E-35 T 13-10-2018 IPR036265 HIT-like superfamily VEA_004003 cd8b8b57cc379324fb880d30ad1f3280 116 Pfam PF01230 HIT domain 12 109 1.8E-29 T 13-10-2018 IPR001310 Histidine triad (HIT) protein VEA_004003 cd8b8b57cc379324fb880d30ad1f3280 116 SUPERFAMILY SSF54197 2 112 4.79E-35 T 13-10-2018 IPR036265 HIT-like superfamily VEA_001454 a0e0e000e606e13a0f30da0a382a516c 157 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 67 154 2.5E-26 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VEA_001454 a0e0e000e606e13a0f30da0a382a516c 157 SUPERFAMILY SSF54534 19 156 4.53E-52 T 13-10-2018 VEA_001454 a0e0e000e606e13a0f30da0a382a516c 157 Gene3D G3DSA:3.10.50.40 21 157 4.7E-53 T 13-10-2018 VEA_001454 a0e0e000e606e13a0f30da0a382a516c 157 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 24 59 7.1E-11 T 13-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 VEA_000822 2bf1764e4c9a533af86827ef693652ab 288 SMART SM00342 196 279 3.0E-21 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_000822 2bf1764e4c9a533af86827ef693652ab 288 Pfam PF12833 Helix-turn-helix domain 202 281 2.5E-17 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_000822 2bf1764e4c9a533af86827ef693652ab 288 SUPERFAMILY SSF46689 180 227 6.27E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_000822 2bf1764e4c9a533af86827ef693652ab 288 Gene3D G3DSA:1.10.10.60 178 228 5.9E-9 T 13-10-2018 VEA_000822 2bf1764e4c9a533af86827ef693652ab 288 SUPERFAMILY SSF51215 22 96 1.96E-7 T 13-10-2018 IPR037923 Transcription regulator HTH-like VEA_000822 2bf1764e4c9a533af86827ef693652ab 288 Gene3D G3DSA:1.10.10.60 229 286 5.9E-16 T 13-10-2018 VEA_000822 2bf1764e4c9a533af86827ef693652ab 288 SUPERFAMILY SSF46689 232 283 9.41E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_000822 2bf1764e4c9a533af86827ef693652ab 288 Pfam PF02311 AraC-like ligand binding domain 21 98 3.1E-5 T 13-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VEA_002266 d721d1d8e9d13d92d357f1df5235127f 394 Gene3D G3DSA:2.40.30.10 149 254 4.3E-33 T 13-10-2018 VEA_002266 d721d1d8e9d13d92d357f1df5235127f 394 Pfam PF00042 Globin 7 103 1.3E-14 T 13-10-2018 IPR000971 Globin GO:0020037 VEA_002266 d721d1d8e9d13d92d357f1df5235127f 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 356 364 1.9E-9 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VEA_002266 d721d1d8e9d13d92d357f1df5235127f 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 1.9E-9 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VEA_002266 d721d1d8e9d13d92d357f1df5235127f 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 183 195 1.9E-9 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VEA_002266 d721d1d8e9d13d92d357f1df5235127f 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 1.9E-9 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VEA_002266 d721d1d8e9d13d92d357f1df5235127f 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 183 193 6.8E-8 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEA_002266 d721d1d8e9d13d92d357f1df5235127f 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 263 282 6.8E-8 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEA_002266 d721d1d8e9d13d92d357f1df5235127f 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 204 211 6.8E-8 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEA_002266 d721d1d8e9d13d92d357f1df5235127f 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 356 364 6.8E-8 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VEA_002266 d721d1d8e9d13d92d357f1df5235127f 394 Gene3D G3DSA:3.40.50.80 256 394 2.0E-32 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VEA_002266 d721d1d8e9d13d92d357f1df5235127f 394 Gene3D G3DSA:1.10.490.10 1 142 8.9E-51 T 13-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 VEA_002266 d721d1d8e9d13d92d357f1df5235127f 394 SUPERFAMILY SSF52343 256 393 7.99E-37 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VEA_002266 d721d1d8e9d13d92d357f1df5235127f 394 Pfam PF00175 Oxidoreductase NAD-binding domain 264 370 2.4E-17 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VEA_002266 d721d1d8e9d13d92d357f1df5235127f 394 SUPERFAMILY SSF63380 148 253 6.07E-29 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VEA_002266 d721d1d8e9d13d92d357f1df5235127f 394 SUPERFAMILY SSF46458 1 142 8.65E-37 T 13-10-2018 IPR009050 Globin-like superfamily VEA_002266 d721d1d8e9d13d92d357f1df5235127f 394 Pfam PF00970 Oxidoreductase FAD-binding domain 155 252 1.6E-13 T 13-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VEA_002266 d721d1d8e9d13d92d357f1df5235127f 394 Hamap MF_01252 Flavohemoprotein [hmp]. 1 394 55.705 T 13-10-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 VEA_002160 dd051bf1b35bb36ca1606cb2478d39f7 412 Gene3D G3DSA:3.30.870.10 2 191 3.2E-158 T 13-10-2018 VEA_002160 dd051bf1b35bb36ca1606cb2478d39f7 412 Pfam PF13091 PLD-like domain 217 368 1.6E-24 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VEA_002160 dd051bf1b35bb36ca1606cb2478d39f7 412 Pfam PF13091 PLD-like domain 2 112 9.0E-7 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VEA_002160 dd051bf1b35bb36ca1606cb2478d39f7 412 SMART SM00155 92 118 5.3E-4 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VEA_002160 dd051bf1b35bb36ca1606cb2478d39f7 412 SMART SM00155 313 340 0.0083 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VEA_002160 dd051bf1b35bb36ca1606cb2478d39f7 412 SUPERFAMILY SSF56024 210 391 4.45E-27 T 13-10-2018 VEA_002160 dd051bf1b35bb36ca1606cb2478d39f7 412 SUPERFAMILY SSF56024 1 148 8.63E-24 T 13-10-2018 VEA_002160 dd051bf1b35bb36ca1606cb2478d39f7 412 Gene3D G3DSA:3.30.870.10 192 407 3.2E-158 T 13-10-2018 VEA_002160 dd051bf1b35bb36ca1606cb2478d39f7 412 PIRSF PIRSF000850 1 412 6.8E-202 T 13-10-2018 VEA_001396 391e210a7bbcbc606ab4256cf7be97cd 571 Gene3D G3DSA:2.40.420.20 328 417 1.2E-21 T 13-10-2018 VEA_001396 391e210a7bbcbc606ab4256cf7be97cd 571 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 113 321 2.1E-77 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VEA_001396 391e210a7bbcbc606ab4256cf7be97cd 571 Gene3D G3DSA:2.40.50.100 207 248 5.5E-28 T 13-10-2018 VEA_001396 391e210a7bbcbc606ab4256cf7be97cd 571 Gene3D G3DSA:2.40.30.170 116 129 5.8E-9 T 13-10-2018 VEA_001396 391e210a7bbcbc606ab4256cf7be97cd 571 Gene3D G3DSA:2.40.50.320 418 489 1.9E-19 T 13-10-2018 VEA_001396 391e210a7bbcbc606ab4256cf7be97cd 571 Gene3D G3DSA:2.40.50.320 498 569 1.1E-16 T 13-10-2018 VEA_001396 391e210a7bbcbc606ab4256cf7be97cd 571 Gene3D G3DSA:1.10.287.470 165 177 5.8E-9 T 13-10-2018 VEA_001396 391e210a7bbcbc606ab4256cf7be97cd 571 Pfam PF11604 Copper binding periplasmic protein CusF 502 567 6.6E-20 T 13-10-2018 IPR021647 Copper binding periplasmic protein CusF VEA_001396 391e210a7bbcbc606ab4256cf7be97cd 571 Pfam PF11604 Copper binding periplasmic protein CusF 422 487 2.0E-22 T 13-10-2018 IPR021647 Copper binding periplasmic protein CusF VEA_001396 391e210a7bbcbc606ab4256cf7be97cd 571 Gene3D G3DSA:2.40.50.100 130 164 5.8E-9 T 13-10-2018 VEA_001396 391e210a7bbcbc606ab4256cf7be97cd 571 Gene3D G3DSA:2.40.30.170 249 322 5.5E-28 T 13-10-2018 VEA_001396 391e210a7bbcbc606ab4256cf7be97cd 571 Gene3D G3DSA:2.40.420.20 104 115 5.8E-9 T 13-10-2018 VEA_001396 391e210a7bbcbc606ab4256cf7be97cd 571 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 214 394 1.2E-33 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VEA_001396 391e210a7bbcbc606ab4256cf7be97cd 571 SUPERFAMILY SSF111369 135 326 6.67E-16 T 13-10-2018 VEA_001118 6b464a1fca7e1e048ff0a73e4d6f7d98 124 SMART SM00226 1 123 1.0E-22 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I VEA_001118 6b464a1fca7e1e048ff0a73e4d6f7d98 124 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 23 39 8.8E-17 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VEA_001118 6b464a1fca7e1e048ff0a73e4d6f7d98 124 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 95 110 8.8E-17 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VEA_001118 6b464a1fca7e1e048ff0a73e4d6f7d98 124 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 57 72 8.8E-17 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VEA_001118 6b464a1fca7e1e048ff0a73e4d6f7d98 124 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 92 8.8E-17 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VEA_001118 6b464a1fca7e1e048ff0a73e4d6f7d98 124 SUPERFAMILY SSF52788 4 124 3.92E-27 T 13-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily VEA_001118 6b464a1fca7e1e048ff0a73e4d6f7d98 124 Gene3D G3DSA:3.40.50.2300 1 124 8.8E-35 T 13-10-2018 VEA_001118 6b464a1fca7e1e048ff0a73e4d6f7d98 124 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 9 120 9.0E-27 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I VEA_000189 414374d81daa363d191d5f12c935e331 578 Gene3D G3DSA:3.60.21.10 1 367 1.6E-87 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like VEA_000189 414374d81daa363d191d5f12c935e331 578 Pfam PF02872 5'-nucleotidase, C-terminal domain 373 537 3.5E-24 T 13-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEA_000189 414374d81daa363d191d5f12c935e331 578 Pfam PF00149 Calcineurin-like phosphoesterase 11 250 2.7E-9 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VEA_000189 414374d81daa363d191d5f12c935e331 578 PRINTS PR01607 Apyrase family signature 273 293 3.7E-12 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEA_000189 414374d81daa363d191d5f12c935e331 578 PRINTS PR01607 Apyrase family signature 233 256 3.7E-12 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEA_000189 414374d81daa363d191d5f12c935e331 578 PRINTS PR01607 Apyrase family signature 8 26 3.7E-12 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEA_000189 414374d81daa363d191d5f12c935e331 578 PRINTS PR01607 Apyrase family signature 214 231 3.7E-12 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEA_000189 414374d81daa363d191d5f12c935e331 578 SUPERFAMILY SSF56300 9 325 1.68E-72 T 13-10-2018 VEA_000189 414374d81daa363d191d5f12c935e331 578 SUPERFAMILY SSF55816 367 562 7.46E-40 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEA_000189 414374d81daa363d191d5f12c935e331 578 Gene3D G3DSA:3.90.780.10 368 576 4.8E-36 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEA_004059 b614a00f2aff36d535a85d0fe178b9c6 414 SUPERFAMILY SSF51905 6 389 7.78E-47 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_004059 b614a00f2aff36d535a85d0fe178b9c6 414 Pfam PF01494 FAD binding domain 7 164 1.2E-15 T 13-10-2018 IPR002938 FAD-binding domain GO:0071949 VEA_004059 b614a00f2aff36d535a85d0fe178b9c6 414 Gene3D G3DSA:3.50.50.60 4 414 5.9E-125 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_004219 a11e1973a870d4fbe0665d41e890724f 339 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 17 331 6.1E-102 T 13-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 VEA_004219 a11e1973a870d4fbe0665d41e890724f 339 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 332 2.9E-31 T 13-10-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_004219 a11e1973a870d4fbe0665d41e890724f 339 Pfam PF06144 DNA polymerase III, delta subunit 20 189 2.3E-46 T 13-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 VEA_004219 a11e1973a870d4fbe0665d41e890724f 339 SUPERFAMILY SSF48019 211 331 1.62E-30 T 13-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 VEA_004219 a11e1973a870d4fbe0665d41e890724f 339 Gene3D G3DSA:3.40.50.300 1 139 2.5E-49 T 13-10-2018 VEA_004219 a11e1973a870d4fbe0665d41e890724f 339 Gene3D G3DSA:1.20.272.10 213 337 7.6E-39 T 13-10-2018 VEA_004219 a11e1973a870d4fbe0665d41e890724f 339 SUPERFAMILY SSF52540 1 208 1.59E-50 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_004219 a11e1973a870d4fbe0665d41e890724f 339 Gene3D G3DSA:1.10.8.60 143 212 1.6E-19 T 13-10-2018 VEA_000726 b4139c823d2c6f9d37521cad349b5607 339 SUPERFAMILY SSF51395 26 337 5.04E-76 T 13-10-2018 VEA_000726 b4139c823d2c6f9d37521cad349b5607 339 Hamap MF_00354 Isopentenyl-diphosphate delta-isomerase [fni]. 4 338 38.221 T 13-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 VEA_000726 b4139c823d2c6f9d37521cad349b5607 339 TIGRFAM TIGR02151 IPP_isom_2: isopentenyl-diphosphate delta-isomerase, type 2 6 338 2.1E-117 T 13-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 VEA_000726 b4139c823d2c6f9d37521cad349b5607 339 PIRSF PIRSF003314 1 339 4.6E-120 T 13-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 VEA_000726 b4139c823d2c6f9d37521cad349b5607 339 SMART SM01240 26 339 0.004 T 13-10-2018 VEA_000726 b4139c823d2c6f9d37521cad349b5607 339 Pfam PF01070 FMN-dependent dehydrogenase 16 106 3.5E-10 T 13-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 VEA_000726 b4139c823d2c6f9d37521cad349b5607 339 Pfam PF01070 FMN-dependent dehydrogenase 168 336 9.8E-19 T 13-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 VEA_000726 b4139c823d2c6f9d37521cad349b5607 339 Gene3D G3DSA:3.20.20.70 3 339 2.1E-119 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_003816 ffaa4ccd366aa2c6d84b13269eb64dca 539 SUPERFAMILY SSF53850 35 535 5.07E-130 T 13-10-2018 VEA_003816 ffaa4ccd366aa2c6d84b13269eb64dca 539 Gene3D G3DSA:3.10.105.10 296 514 1.6E-141 T 13-10-2018 VEA_003816 ffaa4ccd366aa2c6d84b13269eb64dca 539 PIRSF PIRSF002741 4 538 2.1E-90 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VEA_003816 ffaa4ccd366aa2c6d84b13269eb64dca 539 Gene3D G3DSA:3.40.190.10 217 526 1.6E-141 T 13-10-2018 VEA_003816 ffaa4ccd366aa2c6d84b13269eb64dca 539 Gene3D G3DSA:3.90.76.10 44 216 1.6E-141 T 13-10-2018 VEA_003816 ffaa4ccd366aa2c6d84b13269eb64dca 539 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 455 5.3E-83 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain VEA_001369 9d6dff48c58f0fa03946b8655938288d 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 2.0E-18 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_001369 9d6dff48c58f0fa03946b8655938288d 299 Pfam PF03466 LysR substrate binding domain 92 295 1.2E-24 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_001369 9d6dff48c58f0fa03946b8655938288d 299 Gene3D G3DSA:1.10.10.10 8 92 1.6E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001369 9d6dff48c58f0fa03946b8655938288d 299 SUPERFAMILY SSF46785 9 90 1.82E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_001369 9d6dff48c58f0fa03946b8655938288d 299 Gene3D G3DSA:3.40.190.290 94 295 5.0E-39 T 13-10-2018 VEA_001369 9d6dff48c58f0fa03946b8655938288d 299 SUPERFAMILY SSF53850 93 296 2.17E-26 T 13-10-2018 VEA_000362 f8d33bc5546c635fad7528b4eb7c9726 266 Gene3D G3DSA:1.10.3720.10 74 260 1.4E-34 T 13-10-2018 IPR035906 MetI-like superfamily VEA_000362 f8d33bc5546c635fad7528b4eb7c9726 266 TIGRFAM TIGR03416 ABC_choXWV_perm: choline ABC transporter, permease protein 2 258 1.8E-121 T 13-10-2018 IPR017784 ABC transporter, choline, permease protein VEA_000362 f8d33bc5546c635fad7528b4eb7c9726 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 253 5.8E-27 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_000362 f8d33bc5546c635fad7528b4eb7c9726 266 SUPERFAMILY SSF161098 74 258 1.44E-39 T 13-10-2018 IPR035906 MetI-like superfamily VEA_001033 1c84df5c44be168a07ed5ed2922a9e29 166 Gene3D G3DSA:2.60.120.10 33 163 3.9E-41 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VEA_001033 1c84df5c44be168a07ed5ed2922a9e29 166 Pfam PF07883 Cupin domain 73 141 2.9E-11 T 13-10-2018 IPR013096 Cupin 2, conserved barrel VEA_001033 1c84df5c44be168a07ed5ed2922a9e29 166 SUPERFAMILY SSF51182 42 163 1.9E-30 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily VEA_004487 8c9d6d35f856f867a07f359ffc6338a9 420 Gene3D G3DSA:3.90.640.10 235 300 3.1E-111 T 13-10-2018 VEA_004487 8c9d6d35f856f867a07f359ffc6338a9 420 SMART SM00842 10 196 4.3E-95 T 13-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 VEA_004487 8c9d6d35f856f867a07f359ffc6338a9 420 SUPERFAMILY SSF53067 198 384 3.96E-45 T 13-10-2018 VEA_004487 8c9d6d35f856f867a07f359ffc6338a9 420 PIRSF PIRSF003101 1 420 2.4E-146 T 13-10-2018 IPR020823 Cell division protein FtsA VEA_004487 8c9d6d35f856f867a07f359ffc6338a9 420 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 6.2E-151 T 13-10-2018 IPR020823 Cell division protein FtsA VEA_004487 8c9d6d35f856f867a07f359ffc6338a9 420 Pfam PF14450 Cell division protein FtsA 11 182 1.1E-7 T 13-10-2018 VEA_004487 8c9d6d35f856f867a07f359ffc6338a9 420 Pfam PF02491 SHS2 domain inserted in FTSA 85 161 2.5E-28 T 13-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 VEA_004487 8c9d6d35f856f867a07f359ffc6338a9 420 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 420 29.236 T 13-10-2018 IPR020823 Cell division protein FtsA VEA_004487 8c9d6d35f856f867a07f359ffc6338a9 420 Gene3D G3DSA:3.30.420.40 197 359 3.1E-111 T 13-10-2018 VEA_004487 8c9d6d35f856f867a07f359ffc6338a9 420 Gene3D G3DSA:3.30.1490.110 87 169 3.1E-111 T 13-10-2018 VEA_004487 8c9d6d35f856f867a07f359ffc6338a9 420 Gene3D G3DSA:3.30.420.40 13 379 3.1E-111 T 13-10-2018 VEA_004487 8c9d6d35f856f867a07f359ffc6338a9 420 Pfam PF14450 Cell division protein FtsA 207 381 5.8E-24 T 13-10-2018 VEA_004487 8c9d6d35f856f867a07f359ffc6338a9 420 SUPERFAMILY SSF53067 8 221 7.25E-60 T 13-10-2018 VEA_000022 d54572e666c5ec520da4bddc9c5e8e26 499 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 63 493 3.5E-159 T 13-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath VEA_000022 d54572e666c5ec520da4bddc9c5e8e26 499 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 55 493 2.6E-133 T 13-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath VEA_000621 0a9100d2654b3ded19dd869998d9d88c 303 Gene3D G3DSA:3.40.190.10 94 283 3.5E-8 T 13-10-2018 VEA_000621 0a9100d2654b3ded19dd869998d9d88c 303 SUPERFAMILY SSF46785 5 108 2.18E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000621 0a9100d2654b3ded19dd869998d9d88c 303 SUPERFAMILY SSF53850 90 284 4.34E-17 T 13-10-2018 VEA_000621 0a9100d2654b3ded19dd869998d9d88c 303 Gene3D G3DSA:3.40.190.10 166 272 3.5E-8 T 13-10-2018 VEA_000621 0a9100d2654b3ded19dd869998d9d88c 303 Pfam PF03466 LysR substrate binding domain 89 291 7.9E-7 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_000621 0a9100d2654b3ded19dd869998d9d88c 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 17 28 1.2E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000621 0a9100d2654b3ded19dd869998d9d88c 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 38 1.2E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000621 0a9100d2654b3ded19dd869998d9d88c 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 49 1.2E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000621 0a9100d2654b3ded19dd869998d9d88c 303 Gene3D G3DSA:1.10.10.10 3 87 1.8E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000621 0a9100d2654b3ded19dd869998d9d88c 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 6.9E-19 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_004441 0836fd7eb6b91f12c9b7e01155a2eecb 305 Gene3D G3DSA:1.10.150.130 10 105 2.2E-22 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal VEA_004441 0836fd7eb6b91f12c9b7e01155a2eecb 305 Gene3D G3DSA:1.10.443.10 118 299 1.0E-73 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VEA_004441 0836fd7eb6b91f12c9b7e01155a2eecb 305 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 13 305 55.892 T 13-10-2018 IPR023009 Tyrosine recombinase XerC/XerD VEA_004441 0836fd7eb6b91f12c9b7e01155a2eecb 305 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 11 305 60.477 T 13-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 VEA_004441 0836fd7eb6b91f12c9b7e01155a2eecb 305 SUPERFAMILY SSF56349 113 303 3.53E-57 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VEA_004441 0836fd7eb6b91f12c9b7e01155a2eecb 305 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 16 305 7.4E-115 T 13-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 VEA_004441 0836fd7eb6b91f12c9b7e01155a2eecb 305 SUPERFAMILY SSF47823 11 107 1.28E-33 T 13-10-2018 VEA_004441 0836fd7eb6b91f12c9b7e01155a2eecb 305 Pfam PF00589 Phage integrase family 120 291 1.9E-53 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VEA_004441 0836fd7eb6b91f12c9b7e01155a2eecb 305 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 15 97 4.6E-19 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VEA_000343 887f374400e0ee2b19b129f4e7d1c6ea 788 SMART SM00052 516 759 6.3E-63 T 13-10-2018 IPR001633 EAL domain VEA_000343 887f374400e0ee2b19b129f4e7d1c6ea 788 Gene3D G3DSA:3.20.20.450 520 777 1.3E-72 T 13-10-2018 IPR035919 EAL domain superfamily VEA_000343 887f374400e0ee2b19b129f4e7d1c6ea 788 Gene3D G3DSA:3.30.70.270 334 519 3.7E-46 T 13-10-2018 VEA_000343 887f374400e0ee2b19b129f4e7d1c6ea 788 Pfam PF00990 Diguanylate cyclase, GGDEF domain 340 502 1.3E-35 T 13-10-2018 IPR000160 GGDEF domain VEA_000343 887f374400e0ee2b19b129f4e7d1c6ea 788 Pfam PF00563 EAL domain 522 754 2.3E-60 T 13-10-2018 IPR001633 EAL domain VEA_000343 887f374400e0ee2b19b129f4e7d1c6ea 788 SUPERFAMILY SSF55073 345 507 3.53E-38 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_000343 887f374400e0ee2b19b129f4e7d1c6ea 788 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 338 505 1.8E-31 T 13-10-2018 IPR000160 GGDEF domain VEA_000343 887f374400e0ee2b19b129f4e7d1c6ea 788 SUPERFAMILY SSF141868 521 766 4.71E-67 T 13-10-2018 IPR035919 EAL domain superfamily VEA_000343 887f374400e0ee2b19b129f4e7d1c6ea 788 SMART SM00267 329 506 1.2E-42 T 13-10-2018 IPR000160 GGDEF domain VEA_002996 f0beb23b1a89b15fbe83792573d6bd21 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 242 1.7E-67 T 13-10-2018 VEA_002996 f0beb23b1a89b15fbe83792573d6bd21 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VEA_002996 f0beb23b1a89b15fbe83792573d6bd21 245 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 9 243 1.6E-100 T 13-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VEA_002996 f0beb23b1a89b15fbe83792573d6bd21 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.8E-52 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_002996 f0beb23b1a89b15fbe83792573d6bd21 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.8E-52 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_002996 f0beb23b1a89b15fbe83792573d6bd21 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.8E-52 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_002996 f0beb23b1a89b15fbe83792573d6bd21 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.8E-52 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_002996 f0beb23b1a89b15fbe83792573d6bd21 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.8E-52 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_002996 f0beb23b1a89b15fbe83792573d6bd21 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 1.8E-52 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_002996 f0beb23b1a89b15fbe83792573d6bd21 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 216 1.8E-4 T 13-10-2018 VEA_002996 f0beb23b1a89b15fbe83792573d6bd21 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 9.7E-17 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_002996 f0beb23b1a89b15fbe83792573d6bd21 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 9.7E-17 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_002996 f0beb23b1a89b15fbe83792573d6bd21 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 9.7E-17 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_002996 f0beb23b1a89b15fbe83792573d6bd21 245 SUPERFAMILY SSF51735 5 244 1.06E-87 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_002996 f0beb23b1a89b15fbe83792573d6bd21 245 Gene3D G3DSA:3.40.50.720 1 245 1.7E-89 T 13-10-2018 VEA_002922 ca05abe89103e5dbb55e76bb4ec2ae29 602 SUPERFAMILY SSF53649 257 584 5.82E-51 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VEA_002922 ca05abe89103e5dbb55e76bb4ec2ae29 602 Gene3D G3DSA:3.40.720.10 248 548 2.3E-39 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VEA_002922 ca05abe89103e5dbb55e76bb4ec2ae29 602 Pfam PF00884 Sulfatase 267 515 7.2E-24 T 13-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VEA_002922 ca05abe89103e5dbb55e76bb4ec2ae29 602 Pfam PF11893 Domain of unknown function (DUF3413) 6 250 8.6E-99 T 13-10-2018 IPR024588 Inner membrane protein YejM, N-terminal VEA_002922 ca05abe89103e5dbb55e76bb4ec2ae29 602 PIRSF PIRSF004950 6 600 7.9E-251 T 13-10-2018 IPR012159 Inner membrane protein YejM VEA_004058 b08393ee9e3804950b6869a624d6b9b5 246 SUPERFAMILY SSF53955 74 196 2.93E-11 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily VEA_004058 b08393ee9e3804950b6869a624d6b9b5 246 Gene3D G3DSA:1.10.530.10 85 198 2.9E-7 T 13-10-2018 VEA_004058 b08393ee9e3804950b6869a624d6b9b5 246 Pfam PF01464 Transglycosylase SLT domain 100 152 1.0E-4 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 VEA_003455 648520048a03a94a3e552db3411f2be3 119 Pfam PF17537 Family of unknown function (DUF5455) 18 115 2.9E-25 T 13-10-2018 IPR035210 Protein of unknown function DUF5455 VEA_002969 85f25e23155e51b5fc2d8b724fa9764d 150 Pfam PF04217 Protein of unknown function, DUF412 8 146 1.4E-58 T 13-10-2018 IPR007334 Uncharacterised protein family UPF0208 VEA_002969 85f25e23155e51b5fc2d8b724fa9764d 150 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 5 150 35.989 T 13-10-2018 IPR007334 Uncharacterised protein family UPF0208 VEA_001863 aa5786e3bf1f603ececde4a6f8a5238f 90 SMART SM01409 8 61 1.9E-16 T 13-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 VEA_001863 aa5786e3bf1f603ececde4a6f8a5238f 90 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 1.5E-29 T 13-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEA_001863 aa5786e3bf1f603ececde4a6f8a5238f 90 SUPERFAMILY SSF63562 1 78 5.1E-26 T 13-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 VEA_001863 aa5786e3bf1f603ececde4a6f8a5238f 90 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.947 T 13-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEA_001863 aa5786e3bf1f603ececde4a6f8a5238f 90 Pfam PF01192 RNA polymerase Rpb6 10 60 1.1E-17 T 13-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 VEA_001863 aa5786e3bf1f603ececde4a6f8a5238f 90 Gene3D G3DSA:3.90.940.10 1 90 6.2E-30 T 13-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 VEA_002620 06fc89faf9c4efff36e3d0af72d4749c 175 Pfam PF02036 SCP-2 sterol transfer family 42 134 4.2E-19 T 13-10-2018 IPR003033 SCP2 sterol-binding domain VEA_002620 06fc89faf9c4efff36e3d0af72d4749c 175 SUPERFAMILY SSF55718 44 139 1.39E-20 T 13-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VEA_002620 06fc89faf9c4efff36e3d0af72d4749c 175 Gene3D G3DSA:3.30.1050.10 17 139 3.8E-7 T 13-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VEA_002620 06fc89faf9c4efff36e3d0af72d4749c 175 PIRSF PIRSF025550 1 174 5.6E-87 T 13-10-2018 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT VEA_001972 5182478c4b77644e6261d689fe32612f 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 315 2.9E-29 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_001972 5182478c4b77644e6261d689fe32612f 318 SUPERFAMILY SSF161098 99 300 4.84E-25 T 13-10-2018 IPR035906 MetI-like superfamily VEA_001972 5182478c4b77644e6261d689fe32612f 318 Gene3D G3DSA:1.10.3720.10 92 312 8.4E-25 T 13-10-2018 IPR035906 MetI-like superfamily VEA_001972 5182478c4b77644e6261d689fe32612f 318 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 75 2.6E-8 T 13-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VEA_001246 c81828836a3a21ce4168ca36eab9fee2 527 SUPERFAMILY SSF55073 374 524 3.45E-36 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_001246 c81828836a3a21ce4168ca36eab9fee2 527 SUPERFAMILY SSF48452 36 226 7.59E-13 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_001246 c81828836a3a21ce4168ca36eab9fee2 527 Pfam PF00990 Diguanylate cyclase, GGDEF domain 370 522 1.2E-32 T 13-10-2018 IPR000160 GGDEF domain VEA_001246 c81828836a3a21ce4168ca36eab9fee2 527 Gene3D G3DSA:3.30.70.270 355 526 4.2E-43 T 13-10-2018 VEA_001246 c81828836a3a21ce4168ca36eab9fee2 527 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 366 524 7.1E-34 T 13-10-2018 IPR000160 GGDEF domain VEA_001246 c81828836a3a21ce4168ca36eab9fee2 527 Gene3D G3DSA:1.25.40.10 20 314 1.1E-13 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_001246 c81828836a3a21ce4168ca36eab9fee2 527 SMART SM00267 358 526 1.2E-31 T 13-10-2018 IPR000160 GGDEF domain VEA_002587 9dfe28d046c07ba0a55a6e47e9e69c07 1111 Gene3D G3DSA:1.10.8.500 359 408 3.9E-15 T 13-10-2018 VEA_002587 9dfe28d046c07ba0a55a6e47e9e69c07 1111 Gene3D G3DSA:1.10.287.130 409 508 3.4E-22 T 13-10-2018 VEA_002587 9dfe28d046c07ba0a55a6e47e9e69c07 1111 Gene3D G3DSA:3.30.450.20 252 341 3.9E-8 T 13-10-2018 VEA_002587 9dfe28d046c07ba0a55a6e47e9e69c07 1111 SUPERFAMILY SSF52172 701 828 2.85E-40 T 13-10-2018 IPR011006 CheY-like superfamily VEA_002587 9dfe28d046c07ba0a55a6e47e9e69c07 1111 SMART SM00448 705 818 1.0E-43 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_002587 9dfe28d046c07ba0a55a6e47e9e69c07 1111 SMART SM00304 360 413 2.9E-9 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_002587 9dfe28d046c07ba0a55a6e47e9e69c07 1111 Gene3D G3DSA:3.30.565.10 509 672 1.1E-45 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_002587 9dfe28d046c07ba0a55a6e47e9e69c07 1111 Gene3D G3DSA:3.40.50.2300 693 838 1.2E-39 T 13-10-2018 VEA_002587 9dfe28d046c07ba0a55a6e47e9e69c07 1111 SMART SM00388 442 510 2.8E-18 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_002587 9dfe28d046c07ba0a55a6e47e9e69c07 1111 SUPERFAMILY SSF47384 427 510 1.69E-18 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEA_002587 9dfe28d046c07ba0a55a6e47e9e69c07 1111 Pfam PF00072 Response regulator receiver domain 709 819 1.8E-30 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_002587 9dfe28d046c07ba0a55a6e47e9e69c07 1111 SMART SM00387 556 667 3.1E-39 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_002587 9dfe28d046c07ba0a55a6e47e9e69c07 1111 SUPERFAMILY SSF158472 361 412 9.55E-10 T 13-10-2018 VEA_002587 9dfe28d046c07ba0a55a6e47e9e69c07 1111 Pfam PF00512 His Kinase A (phospho-acceptor) domain 443 508 1.1E-14 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_002587 9dfe28d046c07ba0a55a6e47e9e69c07 1111 Gene3D G3DSA:3.30.450.20 841 937 1.5E-7 T 13-10-2018 VEA_002587 9dfe28d046c07ba0a55a6e47e9e69c07 1111 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 557 666 1.1E-28 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_002587 9dfe28d046c07ba0a55a6e47e9e69c07 1111 PRINTS PR00344 Bacterial sensor protein C-terminal signature 592 606 2.0E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_002587 9dfe28d046c07ba0a55a6e47e9e69c07 1111 PRINTS PR00344 Bacterial sensor protein C-terminal signature 627 645 2.0E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_002587 9dfe28d046c07ba0a55a6e47e9e69c07 1111 PRINTS PR00344 Bacterial sensor protein C-terminal signature 651 664 2.0E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_002587 9dfe28d046c07ba0a55a6e47e9e69c07 1111 PRINTS PR00344 Bacterial sensor protein C-terminal signature 610 620 2.0E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_002587 9dfe28d046c07ba0a55a6e47e9e69c07 1111 Pfam PF00672 HAMP domain 362 410 4.1E-11 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_002587 9dfe28d046c07ba0a55a6e47e9e69c07 1111 SMART SM00091 856 921 5.8E-5 T 13-10-2018 IPR000014 PAS domain VEA_002587 9dfe28d046c07ba0a55a6e47e9e69c07 1111 SUPERFAMILY SSF55874 499 670 1.44E-46 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_002587 9dfe28d046c07ba0a55a6e47e9e69c07 1111 SUPERFAMILY SSF55785 843 910 6.81E-8 T 13-10-2018 IPR035965 PAS domain superfamily VEA_000754 2652f89cb22a966d5d610c9a75d23a4b 289 SUPERFAMILY SSF53850 88 287 2.35E-27 T 13-10-2018 VEA_000754 2652f89cb22a966d5d610c9a75d23a4b 289 Pfam PF03466 LysR substrate binding domain 92 288 2.9E-23 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_000754 2652f89cb22a966d5d610c9a75d23a4b 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 4.0E-18 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000754 2652f89cb22a966d5d610c9a75d23a4b 289 Gene3D G3DSA:1.10.10.10 6 96 7.0E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000754 2652f89cb22a966d5d610c9a75d23a4b 289 Gene3D G3DSA:3.40.190.10 102 285 6.7E-41 T 13-10-2018 VEA_000754 2652f89cb22a966d5d610c9a75d23a4b 289 SUPERFAMILY SSF46785 3 82 1.45E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000754 2652f89cb22a966d5d610c9a75d23a4b 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 4.2E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000754 2652f89cb22a966d5d610c9a75d23a4b 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 4.2E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000754 2652f89cb22a966d5d610c9a75d23a4b 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 4.2E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000754 2652f89cb22a966d5d610c9a75d23a4b 289 Gene3D G3DSA:3.40.190.10 162 260 6.7E-41 T 13-10-2018 VEA_000140 41d6cdddd1c79c47481e771bf38c4764 186 Gene3D G3DSA:3.40.630.30 25 177 1.2E-32 T 13-10-2018 VEA_000140 41d6cdddd1c79c47481e771bf38c4764 186 Pfam PF13508 Acetyltransferase (GNAT) domain 64 163 1.7E-9 T 13-10-2018 IPR000182 GNAT domain VEA_000140 41d6cdddd1c79c47481e771bf38c4764 186 SUPERFAMILY SSF55729 14 167 4.87E-16 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_002605 3f17a2b129f35e50d8f5cba23deceb80 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 8 443 9.5E-203 T 13-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_002605 3f17a2b129f35e50d8f5cba23deceb80 446 SUPERFAMILY SSF53738 4 182 1.02E-48 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_002605 3f17a2b129f35e50d8f5cba23deceb80 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 442 1.6E-12 T 13-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_002605 3f17a2b129f35e50d8f5cba23deceb80 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 175 194 4.1E-13 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_002605 3f17a2b129f35e50d8f5cba23deceb80 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 4.1E-13 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_002605 3f17a2b129f35e50d8f5cba23deceb80 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 96 110 4.1E-13 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_002605 3f17a2b129f35e50d8f5cba23deceb80 446 SUPERFAMILY SSF53738 157 257 9.42E-29 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_002605 3f17a2b129f35e50d8f5cba23deceb80 446 SUPERFAMILY SSF55957 358 444 1.96E-21 T 13-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_002605 3f17a2b129f35e50d8f5cba23deceb80 446 SUPERFAMILY SSF53738 259 366 3.34E-29 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_002605 3f17a2b129f35e50d8f5cba23deceb80 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 97 106 - T 13-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_002605 3f17a2b129f35e50d8f5cba23deceb80 446 Gene3D G3DSA:3.40.120.10 4 155 5.1E-49 T 13-10-2018 VEA_002605 3f17a2b129f35e50d8f5cba23deceb80 446 Gene3D G3DSA:3.40.120.10 176 363 1.4E-60 T 13-10-2018 VEA_002605 3f17a2b129f35e50d8f5cba23deceb80 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 4 445 46.922 T 13-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_002605 3f17a2b129f35e50d8f5cba23deceb80 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 368 1.1E-30 T 13-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_002605 3f17a2b129f35e50d8f5cba23deceb80 446 Gene3D G3DSA:3.40.120.10 258 340 1.4E-60 T 13-10-2018 VEA_002605 3f17a2b129f35e50d8f5cba23deceb80 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 255 3.5E-18 T 13-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_002605 3f17a2b129f35e50d8f5cba23deceb80 446 Gene3D G3DSA:3.30.310.50 371 446 2.1E-24 T 13-10-2018 VEA_002605 3f17a2b129f35e50d8f5cba23deceb80 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 136 1.4E-45 T 13-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VEA_001363 483282b0c765a8f476008829f2e8b268 366 Pfam PF00882 Zinc dependent phospholipase C 65 245 5.2E-28 T 13-10-2018 IPR029002 Phospholipase C/D Reactome: R-HSA-163125 VEA_001583 aa287d2987536b6ca886d04edca8d7ab 382 Gene3D G3DSA:2.40.50.100 2 80 3.3E-23 T 13-10-2018 VEA_001583 aa287d2987536b6ca886d04edca8d7ab 382 Gene3D G3DSA:4.10.320.10 118 166 9.6E-11 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VEA_001583 aa287d2987536b6ca886d04edca8d7ab 382 SUPERFAMILY SSF51230 2 90 3.93E-25 T 13-10-2018 IPR011053 Single hybrid motif VEA_001583 aa287d2987536b6ca886d04edca8d7ab 382 SUPERFAMILY SSF47005 122 164 4.32E-9 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VEA_001583 aa287d2987536b6ca886d04edca8d7ab 382 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 26 55 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 VEA_001583 aa287d2987536b6ca886d04edca8d7ab 382 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 173 380 3.6E-55 T 13-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 VEA_001583 aa287d2987536b6ca886d04edca8d7ab 382 Pfam PF00364 Biotin-requiring enzyme 3 75 2.5E-18 T 13-10-2018 IPR000089 Biotin/lipoyl attachment VEA_001583 aa287d2987536b6ca886d04edca8d7ab 382 SUPERFAMILY SSF52777 165 380 1.02E-54 T 13-10-2018 VEA_001583 aa287d2987536b6ca886d04edca8d7ab 382 Pfam PF02817 e3 binding domain 129 161 1.8E-9 T 13-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 VEA_001583 aa287d2987536b6ca886d04edca8d7ab 382 Gene3D G3DSA:3.30.559.10 176 381 7.4E-49 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VEA_003346 20409cb62d8ba96d91f26ca72d12ee61 212 TIGRFAM TIGR02499 HrpE_YscL_not: type III secretion apparatus protein, HrpE/YscL family 19 187 4.3E-43 T 13-10-2018 IPR012842 Type III secretion system HrpE/YscL VEA_003346 20409cb62d8ba96d91f26ca72d12ee61 212 Pfam PF02108 Flagellar assembly protein FliH 77 194 1.7E-17 T 13-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE VEA_003346 20409cb62d8ba96d91f26ca72d12ee61 212 SUPERFAMILY SSF160527 98 205 5.89E-5 T 13-10-2018 VEA_002285 c13d960167c8871646093bae0ec5b8ae 197 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 5 191 49.544 T 13-10-2018 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 VEA_002285 c13d960167c8871646093bae0ec5b8ae 197 Gene3D G3DSA:3.40.50.360 10 186 1.4E-51 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VEA_002285 c13d960167c8871646093bae0ec5b8ae 197 Pfam PF02525 Flavodoxin-like fold 10 168 7.2E-41 T 13-10-2018 IPR003680 Flavodoxin-like fold VEA_002285 c13d960167c8871646093bae0ec5b8ae 197 SUPERFAMILY SSF52218 10 183 3.14E-46 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VEA_003809 f6b257fe7f15cce15a88200b8b2f3d4e 1036 SUPERFAMILY SSF82866 808 1031 4.32E-48 T 13-10-2018 VEA_003809 f6b257fe7f15cce15a88200b8b2f3d4e 1036 Gene3D G3DSA:3.30.70.1320 151 343 1.1E-259 T 13-10-2018 VEA_003809 f6b257fe7f15cce15a88200b8b2f3d4e 1036 Gene3D G3DSA:3.30.70.1430 572 670 1.1E-259 T 13-10-2018 VEA_003809 f6b257fe7f15cce15a88200b8b2f3d4e 1036 SUPERFAMILY SSF82866 307 506 5.36E-33 T 13-10-2018 VEA_003809 f6b257fe7f15cce15a88200b8b2f3d4e 1036 Gene3D G3DSA:1.20.1640.10 521 1024 1.1E-259 T 13-10-2018 VEA_003809 f6b257fe7f15cce15a88200b8b2f3d4e 1036 SUPERFAMILY SSF82714 199 282 5.1E-12 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_003809 f6b257fe7f15cce15a88200b8b2f3d4e 1036 Gene3D G3DSA:3.30.70.1440 671 872 1.1E-259 T 13-10-2018 VEA_003809 f6b257fe7f15cce15a88200b8b2f3d4e 1036 SUPERFAMILY SSF82693 151 338 6.8E-18 T 13-10-2018 VEA_003809 f6b257fe7f15cce15a88200b8b2f3d4e 1036 Pfam PF00873 AcrB/AcrD/AcrF family 19 1028 1.2E-173 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_003809 f6b257fe7f15cce15a88200b8b2f3d4e 1036 SUPERFAMILY SSF82714 729 803 2.09E-9 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_003809 f6b257fe7f15cce15a88200b8b2f3d4e 1036 Gene3D G3DSA:1.20.1640.10 25 520 1.1E-259 T 13-10-2018 VEA_003809 f6b257fe7f15cce15a88200b8b2f3d4e 1036 PRINTS PR00702 Acriflavin resistance protein family signature 347 370 1.3E-25 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_003809 f6b257fe7f15cce15a88200b8b2f3d4e 1036 PRINTS PR00702 Acriflavin resistance protein family signature 454 477 1.3E-25 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_003809 f6b257fe7f15cce15a88200b8b2f3d4e 1036 PRINTS PR00702 Acriflavin resistance protein family signature 25 49 1.3E-25 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_003809 f6b257fe7f15cce15a88200b8b2f3d4e 1036 PRINTS PR00702 Acriflavin resistance protein family signature 53 71 1.3E-25 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_003809 f6b257fe7f15cce15a88200b8b2f3d4e 1036 PRINTS PR00702 Acriflavin resistance protein family signature 401 425 1.3E-25 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_003809 f6b257fe7f15cce15a88200b8b2f3d4e 1036 PRINTS PR00702 Acriflavin resistance protein family signature 479 502 1.3E-25 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_003809 f6b257fe7f15cce15a88200b8b2f3d4e 1036 Gene3D G3DSA:3.30.70.1430 55 820 1.1E-259 T 13-10-2018 VEA_003809 f6b257fe7f15cce15a88200b8b2f3d4e 1036 Gene3D G3DSA:3.30.2090.10 194 286 1.1E-259 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_003809 f6b257fe7f15cce15a88200b8b2f3d4e 1036 SUPERFAMILY SSF82693 55 150 4.88E-23 T 13-10-2018 VEA_003809 f6b257fe7f15cce15a88200b8b2f3d4e 1036 Gene3D G3DSA:3.30.2090.10 722 812 1.1E-259 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_001212 2f6b41df94dffd9bb87dfa11156c0f05 397 SUPERFAMILY SSF53383 4 395 1.51E-121 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_001212 2f6b41df94dffd9bb87dfa11156c0f05 397 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 13-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 VEA_001212 2f6b41df94dffd9bb87dfa11156c0f05 397 Gene3D G3DSA:3.40.640.10 58 296 4.2E-134 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_001212 2f6b41df94dffd9bb87dfa11156c0f05 397 Pfam PF00155 Aminotransferase class I and II 43 387 9.3E-75 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VEA_001212 2f6b41df94dffd9bb87dfa11156c0f05 397 Gene3D G3DSA:3.90.1150.10 40 387 4.2E-134 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEA_001212 2f6b41df94dffd9bb87dfa11156c0f05 397 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 5 397 2.0E-207 T 13-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 VEA_001212 2f6b41df94dffd9bb87dfa11156c0f05 397 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 395 53.361 T 13-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 VEA_001088 970bdb4b6ded1560bb6e59f3d64ee69e 538 SUPERFAMILY SSF54060 291 530 9.3E-52 T 13-10-2018 VEA_001088 970bdb4b6ded1560bb6e59f3d64ee69e 538 Pfam PF04231 Endonuclease I 294 530 2.4E-103 T 13-10-2018 IPR007346 Endonuclease I GO:0004518 VEA_001088 970bdb4b6ded1560bb6e59f3d64ee69e 538 Gene3D G3DSA:2.60.120.260 22 176 4.1E-13 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily VEA_001088 970bdb4b6ded1560bb6e59f3d64ee69e 538 SUPERFAMILY SSF49785 22 164 2.08E-22 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily VEA_001088 970bdb4b6ded1560bb6e59f3d64ee69e 538 Pfam PF02018 Carbohydrate binding domain 22 143 4.7E-8 T 13-10-2018 IPR003305 Carbohydrate-binding, CenC-like GO:0016798 VEA_003923 48fa44d0563fde6e7baaa6f7307c9f91 203 Pfam PF07499 RuvA, C-terminal domain 159 202 9.0E-17 T 13-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 VEA_003923 48fa44d0563fde6e7baaa6f7307c9f91 203 Gene3D G3DSA:1.10.150.20 67 143 2.4E-25 T 13-10-2018 VEA_003923 48fa44d0563fde6e7baaa6f7307c9f91 203 Pfam PF01330 RuvA N terminal domain 2 62 2.0E-21 T 13-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 VEA_003923 48fa44d0563fde6e7baaa6f7307c9f91 203 SMART SM00278 108 127 0.071 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VEA_003923 48fa44d0563fde6e7baaa6f7307c9f91 203 SMART SM00278 73 92 540.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VEA_003923 48fa44d0563fde6e7baaa6f7307c9f91 203 SUPERFAMILY SSF50249 2 63 3.14E-19 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_003923 48fa44d0563fde6e7baaa6f7307c9f91 203 Pfam PF14520 Helix-hairpin-helix domain 72 130 1.6E-13 T 13-10-2018 VEA_003923 48fa44d0563fde6e7baaa6f7307c9f91 203 Gene3D G3DSA:2.40.50.140 1 65 4.0E-28 T 13-10-2018 VEA_003923 48fa44d0563fde6e7baaa6f7307c9f91 203 Gene3D G3DSA:1.10.8.10 156 203 2.1E-24 T 13-10-2018 VEA_003923 48fa44d0563fde6e7baaa6f7307c9f91 203 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 203 31.54 T 13-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 VEA_003923 48fa44d0563fde6e7baaa6f7307c9f91 203 SUPERFAMILY SSF46929 157 202 8.11E-13 T 13-10-2018 IPR036267 RuvA, C-terminal domain superfamily VEA_003923 48fa44d0563fde6e7baaa6f7307c9f91 203 SUPERFAMILY SSF47781 66 136 2.45E-19 T 13-10-2018 IPR010994 RuvA domain 2-like VEA_003923 48fa44d0563fde6e7baaa6f7307c9f91 203 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 202 5.9E-65 T 13-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 VEA_002455 625b0fa9736716b8270b95ed00eb71ee 272 SUPERFAMILY SSF51735 4 160 4.65E-39 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_002455 625b0fa9736716b8270b95ed00eb71ee 272 PIRSF PIRSF000193 3 270 3.6E-77 T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 VEA_002455 625b0fa9736716b8270b95ed00eb71ee 272 SUPERFAMILY SSF48179 163 270 4.59E-30 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VEA_002455 625b0fa9736716b8270b95ed00eb71ee 272 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 268 25.297 T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 VEA_002455 625b0fa9736716b8270b95ed00eb71ee 272 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 224 246 - T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 VEA_002455 625b0fa9736716b8270b95ed00eb71ee 272 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 268 1.8E-73 T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 VEA_002455 625b0fa9736716b8270b95ed00eb71ee 272 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 268 3.5E-30 T 13-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 VEA_002455 625b0fa9736716b8270b95ed00eb71ee 272 Gene3D G3DSA:1.10.3730.10 165 272 1.8E-34 T 13-10-2018 VEA_002455 625b0fa9736716b8270b95ed00eb71ee 272 Gene3D G3DSA:3.40.50.720 2 164 2.8E-51 T 13-10-2018 VEA_002455 625b0fa9736716b8270b95ed00eb71ee 272 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 99 1.7E-25 T 13-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal VEA_000364 f261fae7717525ea97644d45ec559544 571 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 3 558 59.818 T 13-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 VEA_000364 f261fae7717525ea97644d45ec559544 571 Gene3D G3DSA:3.50.50.60 4 535 1.5E-174 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_000364 f261fae7717525ea97644d45ec559544 571 Gene3D G3DSA:1.10.1220.110 97 150 1.5E-174 T 13-10-2018 VEA_000364 f261fae7717525ea97644d45ec559544 571 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 13-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VEA_000364 f261fae7717525ea97644d45ec559544 571 Gene3D G3DSA:4.10.450.10 38 198 1.5E-174 T 13-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 VEA_000364 f261fae7717525ea97644d45ec559544 571 TIGRFAM TIGR01810 betA: choline dehydrogenase 6 537 3.0E-232 T 13-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 VEA_000364 f261fae7717525ea97644d45ec559544 571 Pfam PF05199 GMC oxidoreductase 393 531 5.8E-40 T 13-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 VEA_000364 f261fae7717525ea97644d45ec559544 571 SUPERFAMILY SSF51905 1 538 7.4E-84 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_000364 f261fae7717525ea97644d45ec559544 571 Gene3D G3DSA:3.30.410.40 151 476 1.5E-174 T 13-10-2018 VEA_000364 f261fae7717525ea97644d45ec559544 571 Pfam PF00732 GMC oxidoreductase 5 302 1.7E-86 T 13-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VEA_000364 f261fae7717525ea97644d45ec559544 571 PIRSF PIRSF000137 1 546 9.0E-148 T 13-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 VEA_000364 f261fae7717525ea97644d45ec559544 571 SUPERFAMILY SSF54373 297 479 1.57E-61 T 13-10-2018 VEA_000116 6d93ba7d9935da4e4c73854fdb5a416d 485 Gene3D G3DSA:3.40.50.300 9 250 4.3E-56 T 13-10-2018 VEA_000116 6d93ba7d9935da4e4c73854fdb5a416d 485 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 256 440 2.1E-58 T 13-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 VEA_000116 6d93ba7d9935da4e4c73854fdb5a416d 485 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 485 195.737 T 13-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 VEA_000116 6d93ba7d9935da4e4c73854fdb5a416d 485 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 10 482 5.5E-154 T 13-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 VEA_000116 6d93ba7d9935da4e4c73854fdb5a416d 485 SUPERFAMILY SSF52317 257 448 1.83E-36 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VEA_000116 6d93ba7d9935da4e4c73854fdb5a416d 485 Pfam PF13500 AAA domain 9 238 6.2E-22 T 13-10-2018 VEA_000116 6d93ba7d9935da4e4c73854fdb5a416d 485 SUPERFAMILY SSF52540 8 243 4.25E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000116 6d93ba7d9935da4e4c73854fdb5a416d 485 Gene3D G3DSA:3.40.50.880 268 453 3.7E-20 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VEA_004184 b39060b65b362c56c7fe030ffb412f41 475 SUPERFAMILY SSF52374 3 301 3.22E-111 T 13-10-2018 VEA_004184 b39060b65b362c56c7fe030ffb412f41 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 192 1.4E-27 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VEA_004184 b39060b65b362c56c7fe030ffb412f41 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 1.4E-27 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VEA_004184 b39060b65b362c56c7fe030ffb412f41 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 1.4E-27 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VEA_004184 b39060b65b362c56c7fe030ffb412f41 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 1.4E-27 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VEA_004184 b39060b65b362c56c7fe030ffb412f41 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 206 1.4E-27 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VEA_004184 b39060b65b362c56c7fe030ffb412f41 475 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 308 4.1E-118 T 13-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 VEA_004184 b39060b65b362c56c7fe030ffb412f41 475 SUPERFAMILY SSF48163 302 465 6.02E-45 T 13-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 VEA_004184 b39060b65b362c56c7fe030ffb412f41 475 Gene3D G3DSA:1.10.10.350 369 473 1.4E-23 T 13-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 VEA_004184 b39060b65b362c56c7fe030ffb412f41 475 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEA_004184 b39060b65b362c56c7fe030ffb412f41 475 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 465 32.297 T 13-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 VEA_004184 b39060b65b362c56c7fe030ffb412f41 475 Gene3D G3DSA:3.40.50.620 2 317 4.3E-136 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_004184 b39060b65b362c56c7fe030ffb412f41 475 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 469 1.7E-196 T 13-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 VEA_001169 4d7656de415d8e7a4afd56915a9a82f8 357 Pfam PF02120 Flagellar hook-length control protein FliK 239 318 1.4E-20 T 13-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal VEA_001169 4d7656de415d8e7a4afd56915a9a82f8 357 Gene3D G3DSA:3.30.750.140 216 331 1.5E-22 T 13-10-2018 IPR038610 FliK-like, C-terminal domain superfamily VEA_003405 d9dc1d440d14c169ec5d9fc6c836be23 204 SUPERFAMILY SSF103088 77 184 3.27E-30 T 13-10-2018 IPR036737 OmpA-like domain superfamily VEA_003405 d9dc1d440d14c169ec5d9fc6c836be23 204 PRINTS PR01021 OMPA domain signature 129 145 5.3E-7 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEA_003405 d9dc1d440d14c169ec5d9fc6c836be23 204 PRINTS PR01021 OMPA domain signature 84 106 5.3E-7 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEA_003405 d9dc1d440d14c169ec5d9fc6c836be23 204 PRINTS PR01021 OMPA domain signature 114 129 5.3E-7 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEA_003405 d9dc1d440d14c169ec5d9fc6c836be23 204 Gene3D G3DSA:3.30.1330.60 58 191 2.9E-28 T 13-10-2018 IPR036737 OmpA-like domain superfamily VEA_003405 d9dc1d440d14c169ec5d9fc6c836be23 204 Pfam PF00691 OmpA family 83 178 1.2E-18 T 13-10-2018 IPR006665 OmpA-like domain VEA_003405 d9dc1d440d14c169ec5d9fc6c836be23 204 SUPERFAMILY SSF103647 15 72 4.71E-9 T 13-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 VEA_004392 d45aa5fcd3c1528301b7e26d1fb3c991 857 SUPERFAMILY SSF52540 159 545 5.58E-101 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_004392 d45aa5fcd3c1528301b7e26d1fb3c991 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 3.9E-57 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VEA_004392 d45aa5fcd3c1528301b7e26d1fb3c991 857 SUPERFAMILY SSF52540 546 851 1.14E-84 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_004392 d45aa5fcd3c1528301b7e26d1fb3c991 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 13-10-2018 IPR028299 ClpA/B, conserved site 2 VEA_004392 d45aa5fcd3c1528301b7e26d1fb3c991 857 SMART SM00382 198 344 3.0E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_004392 d45aa5fcd3c1528301b7e26d1fb3c991 857 SMART SM00382 597 767 1.1E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_004392 d45aa5fcd3c1528301b7e26d1fb3c991 857 Gene3D G3DSA:1.10.1780.10 1 148 7.3E-33 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VEA_004392 d45aa5fcd3c1528301b7e26d1fb3c991 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 1.4E-11 T 13-10-2018 IPR004176 Clp, N-terminal VEA_004392 d45aa5fcd3c1528301b7e26d1fb3c991 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 1.8E-13 T 13-10-2018 IPR004176 Clp, N-terminal VEA_004392 d45aa5fcd3c1528301b7e26d1fb3c991 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 4.3E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 VEA_004392 d45aa5fcd3c1528301b7e26d1fb3c991 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 4.3E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 VEA_004392 d45aa5fcd3c1528301b7e26d1fb3c991 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 4.3E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 VEA_004392 d45aa5fcd3c1528301b7e26d1fb3c991 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 4.3E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 VEA_004392 d45aa5fcd3c1528301b7e26d1fb3c991 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 2.6E-28 T 13-10-2018 IPR019489 Clp ATPase, C-terminal VEA_004392 d45aa5fcd3c1528301b7e26d1fb3c991 857 Gene3D G3DSA:3.40.50.300 158 347 7.3E-75 T 13-10-2018 VEA_004392 d45aa5fcd3c1528301b7e26d1fb3c991 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 320 2.4E-13 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VEA_004392 d45aa5fcd3c1528301b7e26d1fb3c991 857 Gene3D G3DSA:3.40.50.300 348 544 1.6E-67 T 13-10-2018 VEA_004392 d45aa5fcd3c1528301b7e26d1fb3c991 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 13-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 VEA_004392 d45aa5fcd3c1528301b7e26d1fb3c991 857 Gene3D G3DSA:1.10.8.60 766 857 5.5E-28 T 13-10-2018 VEA_004392 d45aa5fcd3c1528301b7e26d1fb3c991 857 SUPERFAMILY SSF81923 4 156 8.24E-43 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VEA_004392 d45aa5fcd3c1528301b7e26d1fb3c991 857 Gene3D G3DSA:3.40.50.300 550 764 2.0E-89 T 13-10-2018 VEA_004392 d45aa5fcd3c1528301b7e26d1fb3c991 857 SMART SM01086 766 855 1.6E-37 T 13-10-2018 IPR019489 Clp ATPase, C-terminal VEA_004392 d45aa5fcd3c1528301b7e26d1fb3c991 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 854 0.0 T 13-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 VEA_003855 2a062728a635932de89b1bc247de8443 374 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 366 40.043 T 13-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 VEA_003855 2a062728a635932de89b1bc247de8443 374 SUPERFAMILY SSF52402 5 247 7.06E-57 T 13-10-2018 VEA_003855 2a062728a635932de89b1bc247de8443 374 Gene3D G3DSA:2.40.30.10 287 372 8.0E-34 T 13-10-2018 VEA_003855 2a062728a635932de89b1bc247de8443 374 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 7 365 2.6E-152 T 13-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 VEA_003855 2a062728a635932de89b1bc247de8443 374 Gene3D G3DSA:2.30.30.280 216 286 4.0E-25 T 13-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 VEA_003855 2a062728a635932de89b1bc247de8443 374 Pfam PF03054 tRNA methyl transferase 7 365 9.8E-142 T 13-10-2018 VEA_003855 2a062728a635932de89b1bc247de8443 374 Gene3D G3DSA:3.40.50.620 1 214 4.2E-94 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_003934 3d331f89ef392f6d839a52ac3c5ca309 1489 Gene3D G3DSA:1.20.58.850 585 855 1.0E-133 T 13-10-2018 VEA_003934 3d331f89ef392f6d839a52ac3c5ca309 1489 Pfam PF16330 MukB hinge domain 649 813 2.2E-72 T 13-10-2018 IPR032520 MukB, hinge domain VEA_003934 3d331f89ef392f6d839a52ac3c5ca309 1489 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 3 1474 10.913 T 13-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 VEA_003934 3d331f89ef392f6d839a52ac3c5ca309 1489 SUPERFAMILY SSF52540 23 1436 9.77E-6 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003934 3d331f89ef392f6d839a52ac3c5ca309 1489 Gene3D G3DSA:3.40.1140.10 3 229 3.9E-97 T 13-10-2018 VEA_003934 3d331f89ef392f6d839a52ac3c5ca309 1489 Gene3D G3DSA:1.20.58.850 623 833 1.0E-133 T 13-10-2018 VEA_003934 3d331f89ef392f6d839a52ac3c5ca309 1489 Pfam PF04310 MukB N-terminal 4 229 1.2E-120 T 13-10-2018 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 VEA_003934 3d331f89ef392f6d839a52ac3c5ca309 1489 Gene3D G3DSA:1.20.1060.30 670 781 1.0E-133 T 13-10-2018 VEA_003934 3d331f89ef392f6d839a52ac3c5ca309 1489 PIRSF PIRSF005246 3 1489 0.0 T 13-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 VEA_003934 3d331f89ef392f6d839a52ac3c5ca309 1489 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1339 1427 1.1E-14 T 13-10-2018 VEA_003934 3d331f89ef392f6d839a52ac3c5ca309 1489 Gene3D G3DSA:3.40.1140.10 1385 1471 1.2E-38 T 13-10-2018 VEA_003934 3d331f89ef392f6d839a52ac3c5ca309 1489 SUPERFAMILY SSF52540 28 226 6.26E-23 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001676 2925a9d8c2688d38abf7eab375ee6ba5 311 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 13-10-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 VEA_001676 2925a9d8c2688d38abf7eab375ee6ba5 311 Gene3D G3DSA:3.90.110.10 147 311 4.6E-55 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VEA_001676 2925a9d8c2688d38abf7eab375ee6ba5 311 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 309 5.7E-50 T 13-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 VEA_001676 2925a9d8c2688d38abf7eab375ee6ba5 311 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 1.7E-47 T 13-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 VEA_001676 2925a9d8c2688d38abf7eab375ee6ba5 311 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 310 1.8E-130 T 13-10-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 VEA_001676 2925a9d8c2688d38abf7eab375ee6ba5 311 SUPERFAMILY SSF51735 1 145 5.53E-40 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_001676 2925a9d8c2688d38abf7eab375ee6ba5 311 SUPERFAMILY SSF56327 146 309 3.86E-43 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VEA_001676 2925a9d8c2688d38abf7eab375ee6ba5 311 Gene3D G3DSA:3.40.50.720 1 146 4.5E-66 T 13-10-2018 VEA_001676 2925a9d8c2688d38abf7eab375ee6ba5 311 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 57.628 T 13-10-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 VEA_001676 2925a9d8c2688d38abf7eab375ee6ba5 311 PIRSF PIRSF000102 1 308 4.9E-63 T 13-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VEA_000287 c3da32b89e7926000b1ac130c163df27 314 Gene3D G3DSA:3.40.50.300 6 174 4.5E-43 T 13-10-2018 VEA_000287 c3da32b89e7926000b1ac130c163df27 314 SUPERFAMILY SSF52540 12 186 2.7E-40 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000287 c3da32b89e7926000b1ac130c163df27 314 Pfam PF01926 50S ribosome-binding GTPase 120 186 3.3E-14 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 VEA_000287 c3da32b89e7926000b1ac130c163df27 314 Gene3D G3DSA:1.10.1580.10 177 268 4.6E-28 T 13-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily VEA_000287 c3da32b89e7926000b1ac130c163df27 314 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 6 275 9.0E-107 T 13-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis VEA_000287 c3da32b89e7926000b1ac130c163df27 314 PIRSF PIRSF006230 2 280 8.6E-105 T 13-10-2018 IPR016478 GTPase, MTG1 VEA_002322 942cb98b7ccd5729a03b245a36bfb69d 338 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 5 327 1.3E-74 T 13-10-2018 IPR005883 Type IV pilus assembly protein PilM VEA_002322 942cb98b7ccd5729a03b245a36bfb69d 338 Gene3D G3DSA:3.30.1490.300 82 141 2.0E-46 T 13-10-2018 VEA_002322 942cb98b7ccd5729a03b245a36bfb69d 338 Gene3D G3DSA:3.30.420.40 182 292 2.0E-46 T 13-10-2018 VEA_002322 942cb98b7ccd5729a03b245a36bfb69d 338 Pfam PF11104 Type IV pilus assembly protein PilM; 8 326 1.4E-53 T 13-10-2018 IPR005883 Type IV pilus assembly protein PilM VEA_002322 942cb98b7ccd5729a03b245a36bfb69d 338 SUPERFAMILY SSF53067 6 165 1.62E-6 T 13-10-2018 VEA_002322 942cb98b7ccd5729a03b245a36bfb69d 338 PIRSF PIRSF019169 1 328 1.5E-93 T 13-10-2018 IPR005883 Type IV pilus assembly protein PilM VEA_002322 942cb98b7ccd5729a03b245a36bfb69d 338 Gene3D G3DSA:3.30.420.40 8 325 2.0E-46 T 13-10-2018 VEA_003224 1d05ce8e99072d27bbf261f78866404d 116 Pfam PF07883 Cupin domain 43 111 2.2E-14 T 13-10-2018 IPR013096 Cupin 2, conserved barrel VEA_003224 1d05ce8e99072d27bbf261f78866404d 116 Gene3D G3DSA:2.60.120.10 1 112 4.2E-24 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VEA_003224 1d05ce8e99072d27bbf261f78866404d 116 SUPERFAMILY SSF51182 1 112 1.04E-18 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily VEA_001335 5e09bb73abebadc33ea583606d96a727 305 Pfam PF00246 Zinc carboxypeptidase 74 146 3.5E-7 T 13-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 VEA_001335 5e09bb73abebadc33ea583606d96a727 305 SUPERFAMILY SSF53187 36 288 2.61E-39 T 13-10-2018 VEA_001335 5e09bb73abebadc33ea583606d96a727 305 Gene3D G3DSA:3.40.630.10 5 305 3.3E-117 T 13-10-2018 VEA_001819 e4bb6030cdb6c1393052a1629f342086 56 SUPERFAMILY SSF57829 3 54 7.32E-19 T 13-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 VEA_001819 e4bb6030cdb6c1393052a1629f342086 56 Gene3D G3DSA:2.20.28.120 1 56 1.2E-28 T 13-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001819 e4bb6030cdb6c1393052a1629f342086 56 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 56 1.4E-26 T 13-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001819 e4bb6030cdb6c1393052a1629f342086 56 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 6 54 14.671 T 13-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001819 e4bb6030cdb6c1393052a1629f342086 56 Pfam PF00471 Ribosomal protein L33 8 54 1.2E-16 T 13-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001819 e4bb6030cdb6c1393052a1629f342086 56 ProSitePatterns PS00582 Ribosomal protein L33 signature. 22 41 - T 13-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_001981 2b502997e1c00e6a4fdb01b8616b3430 1040 Gene3D G3DSA:3.30.2090.10 178 268 2.1E-287 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_001981 2b502997e1c00e6a4fdb01b8616b3430 1040 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 9.3E-76 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_001981 2b502997e1c00e6a4fdb01b8616b3430 1040 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 9.3E-76 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_001981 2b502997e1c00e6a4fdb01b8616b3430 1040 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 9.3E-76 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_001981 2b502997e1c00e6a4fdb01b8616b3430 1040 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 9.3E-76 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_001981 2b502997e1c00e6a4fdb01b8616b3430 1040 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 9.3E-76 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_001981 2b502997e1c00e6a4fdb01b8616b3430 1040 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 9.3E-76 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_001981 2b502997e1c00e6a4fdb01b8616b3430 1040 PRINTS PR00702 Acriflavin resistance protein family signature 603 617 9.3E-76 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_001981 2b502997e1c00e6a4fdb01b8616b3430 1040 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 9.3E-76 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_001981 2b502997e1c00e6a4fdb01b8616b3430 1040 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 9.3E-76 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_001981 2b502997e1c00e6a4fdb01b8616b3430 1040 Pfam PF00873 AcrB/AcrD/AcrF family 4 1003 9.4E-277 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_001981 2b502997e1c00e6a4fdb01b8616b3430 1040 Gene3D G3DSA:3.30.70.1430 555 647 2.1E-287 T 13-10-2018 VEA_001981 2b502997e1c00e6a4fdb01b8616b3430 1040 Gene3D G3DSA:1.20.1640.10 501 1001 2.1E-287 T 13-10-2018 VEA_001981 2b502997e1c00e6a4fdb01b8616b3430 1040 Gene3D G3DSA:3.30.70.1430 40 794 2.1E-287 T 13-10-2018 VEA_001981 2b502997e1c00e6a4fdb01b8616b3430 1040 SUPERFAMILY SSF82866 782 1008 5.1E-47 T 13-10-2018 VEA_001981 2b502997e1c00e6a4fdb01b8616b3430 1040 Gene3D G3DSA:3.30.70.1440 648 843 2.1E-287 T 13-10-2018 VEA_001981 2b502997e1c00e6a4fdb01b8616b3430 1040 Gene3D G3DSA:1.20.1640.10 10 500 2.1E-287 T 13-10-2018 VEA_001981 2b502997e1c00e6a4fdb01b8616b3430 1040 Gene3D G3DSA:3.30.2090.10 698 786 2.1E-287 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_001981 2b502997e1c00e6a4fdb01b8616b3430 1040 SUPERFAMILY SSF82693 41 130 2.62E-23 T 13-10-2018 VEA_001981 2b502997e1c00e6a4fdb01b8616b3430 1040 SUPERFAMILY SSF82693 136 323 5.36E-22 T 13-10-2018 VEA_001981 2b502997e1c00e6a4fdb01b8616b3430 1040 SUPERFAMILY SSF82693 553 650 2.72E-20 T 13-10-2018 VEA_001981 2b502997e1c00e6a4fdb01b8616b3430 1040 Gene3D G3DSA:3.30.70.1320 134 325 2.1E-287 T 13-10-2018 VEA_001981 2b502997e1c00e6a4fdb01b8616b3430 1040 SUPERFAMILY SSF82714 701 783 1.31E-17 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_001981 2b502997e1c00e6a4fdb01b8616b3430 1040 SUPERFAMILY SSF82866 290 489 6.41E-47 T 13-10-2018 VEA_001981 2b502997e1c00e6a4fdb01b8616b3430 1040 SUPERFAMILY SSF82714 182 263 1.31E-15 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_002076 8aebca6ec68fc82c11f9957c51356320 255 SUPERFAMILY SSF110399 1 236 4.84E-85 T 13-10-2018 VEA_002076 8aebca6ec68fc82c11f9957c51356320 255 Gene3D G3DSA:3.20.20.70 1 253 3.7E-111 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_002076 8aebca6ec68fc82c11f9957c51356320 255 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 43.299 T 13-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 VEA_002076 8aebca6ec68fc82c11f9957c51356320 255 Pfam PF05690 Thiazole biosynthesis protein ThiG 3 247 4.0E-110 T 13-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 VEA_002403 bdc0e6580009bf4be31ecee93517ddc2 489 Pfam PF04552 Sigma-54, DNA binding domain 329 487 3.8E-72 T 13-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding VEA_002403 bdc0e6580009bf4be31ecee93517ddc2 489 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 376 395 - T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VEA_002403 bdc0e6580009bf4be31ecee93517ddc2 489 Gene3D G3DSA:1.10.10.60 429 486 2.3E-23 T 13-10-2018 VEA_002403 bdc0e6580009bf4be31ecee93517ddc2 489 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 486 1.8E-157 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VEA_002403 bdc0e6580009bf4be31ecee93517ddc2 489 Pfam PF04963 Sigma-54 factor, core binding domain 128 317 8.1E-61 T 13-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 VEA_002403 bdc0e6580009bf4be31ecee93517ddc2 489 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 49 5.9E-17 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VEA_002403 bdc0e6580009bf4be31ecee93517ddc2 489 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 467 474 - T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VEA_002403 bdc0e6580009bf4be31ecee93517ddc2 489 PIRSF PIRSF000774 1 489 1.2E-151 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VEA_002403 bdc0e6580009bf4be31ecee93517ddc2 489 Gene3D G3DSA:1.10.10.1330 130 248 1.5E-25 T 13-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily VEA_002403 bdc0e6580009bf4be31ecee93517ddc2 489 PRINTS PR00045 Sigma-54 factor signature 200 217 7.7E-32 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VEA_002403 bdc0e6580009bf4be31ecee93517ddc2 489 PRINTS PR00045 Sigma-54 factor signature 388 400 7.7E-32 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VEA_002403 bdc0e6580009bf4be31ecee93517ddc2 489 PRINTS PR00045 Sigma-54 factor signature 404 415 7.7E-32 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VEA_002403 bdc0e6580009bf4be31ecee93517ddc2 489 PRINTS PR00045 Sigma-54 factor signature 462 480 7.7E-32 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VEA_003684 265ed59a4aec9ce0e8eaef5a99f0eb0d 190 Pfam PF07209 Protein of unknown function (DUF1415) 14 182 7.0E-66 T 13-10-2018 IPR009858 Protein of unknown function DUF1415 VEA_002584 eed4524a96bc492e58ee77151057f4ab 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 305 2.3E-20 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_002584 eed4524a96bc492e58ee77151057f4ab 341 Gene3D G3DSA:1.10.3720.10 94 303 4.8E-15 T 13-10-2018 IPR035906 MetI-like superfamily VEA_002584 eed4524a96bc492e58ee77151057f4ab 341 SUPERFAMILY SSF161098 96 288 1.57E-19 T 13-10-2018 IPR035906 MetI-like superfamily VEA_001886 95c7ee0ab28a52606c0483db084ca3c1 225 Pfam PF07963 Prokaryotic N-terminal methylation motif 15 38 4.3E-8 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEA_001886 95c7ee0ab28a52606c0483db084ca3c1 225 Gene3D G3DSA:3.10.610.10 47 160 5.4E-36 T 13-10-2018 VEA_001886 95c7ee0ab28a52606c0483db084ca3c1 225 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 16 38 2.4E-8 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEA_001886 95c7ee0ab28a52606c0483db084ca3c1 225 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 16 207 7.6E-81 T 13-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 VEA_001886 95c7ee0ab28a52606c0483db084ca3c1 225 SUPERFAMILY SSF54523 51 213 6.28E-59 T 13-10-2018 VEA_001886 95c7ee0ab28a52606c0483db084ca3c1 225 Gene3D G3DSA:2.10.70.20 162 210 1.8E-16 T 13-10-2018 VEA_001886 95c7ee0ab28a52606c0483db084ca3c1 225 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 16 36 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEA_001886 95c7ee0ab28a52606c0483db084ca3c1 225 Pfam PF11612 Type II secretion system (T2SS), protein J 68 205 2.2E-41 T 13-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 VEA_003721 de47bba49d229b9cc6f4cff076f082c2 336 Gene3D G3DSA:3.40.800.10 7 335 1.4E-129 T 13-10-2018 VEA_003721 de47bba49d229b9cc6f4cff076f082c2 336 PRINTS PR00116 Arginase signature 125 140 1.6E-5 T 13-10-2018 IPR006035 Ureohydrolase GO:0046872 VEA_003721 de47bba49d229b9cc6f4cff076f082c2 336 PRINTS PR00116 Arginase signature 252 281 1.6E-5 T 13-10-2018 IPR006035 Ureohydrolase GO:0046872 VEA_003721 de47bba49d229b9cc6f4cff076f082c2 336 ProSitePatterns PS01053 Arginase family signature. 255 276 - T 13-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 VEA_003721 de47bba49d229b9cc6f4cff076f082c2 336 TIGRFAM TIGR01227 hutG: formimidoylglutamase 13 327 6.4E-113 T 13-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 VEA_003721 de47bba49d229b9cc6f4cff076f082c2 336 Hamap MF_00737 Formimidoylglutamase [hutG]. 8 327 42.167 T 13-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 VEA_003721 de47bba49d229b9cc6f4cff076f082c2 336 SUPERFAMILY SSF52768 13 333 1.03E-83 T 13-10-2018 IPR023696 Ureohydrolase domain superfamily VEA_003721 de47bba49d229b9cc6f4cff076f082c2 336 Pfam PF00491 Arginase family 47 325 3.8E-60 T 13-10-2018 IPR006035 Ureohydrolase GO:0046872 VEA_003721 de47bba49d229b9cc6f4cff076f082c2 336 PIRSF PIRSF036979 24 333 1.9E-25 T 13-10-2018 IPR006035 Ureohydrolase GO:0046872 VEA_001115 e1612a5c7b4153ff3b91228050634de2 425 Pfam PF08874 Domain of unknown function (DUF1835) 100 215 7.1E-14 T 13-10-2018 IPR014973 Protein of unknown function DUF1835 VEA_003067 754a6f0ced952fc1dba6f6376ca711a7 818 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 128 240 1.1E-9 T 13-10-2018 IPR000014 PAS domain VEA_003067 754a6f0ced952fc1dba6f6376ca711a7 818 SUPERFAMILY SSF141868 425 664 9.94E-66 T 13-10-2018 IPR035919 EAL domain superfamily VEA_003067 754a6f0ced952fc1dba6f6376ca711a7 818 Gene3D G3DSA:3.10.580.10 684 817 2.2E-11 T 13-10-2018 VEA_003067 754a6f0ced952fc1dba6f6376ca711a7 818 SMART SM00052 417 663 3.5E-61 T 13-10-2018 IPR001633 EAL domain VEA_003067 754a6f0ced952fc1dba6f6376ca711a7 818 Gene3D G3DSA:3.30.450.20 124 266 1.8E-14 T 13-10-2018 VEA_003067 754a6f0ced952fc1dba6f6376ca711a7 818 SUPERFAMILY SSF54631 693 816 7.81E-13 T 13-10-2018 VEA_003067 754a6f0ced952fc1dba6f6376ca711a7 818 SMART SM00091 128 194 3.9E-6 T 13-10-2018 IPR000014 PAS domain VEA_003067 754a6f0ced952fc1dba6f6376ca711a7 818 Pfam PF00571 CBS domain 761 816 1.5E-6 T 13-10-2018 IPR000644 CBS domain VEA_003067 754a6f0ced952fc1dba6f6376ca711a7 818 Pfam PF00563 EAL domain 426 657 2.6E-63 T 13-10-2018 IPR001633 EAL domain VEA_003067 754a6f0ced952fc1dba6f6376ca711a7 818 SUPERFAMILY SSF55785 126 239 1.05E-15 T 13-10-2018 IPR035965 PAS domain superfamily VEA_003067 754a6f0ced952fc1dba6f6376ca711a7 818 Gene3D G3DSA:3.20.20.450 416 671 1.8E-71 T 13-10-2018 IPR035919 EAL domain superfamily VEA_003067 754a6f0ced952fc1dba6f6376ca711a7 818 Pfam PF00989 PAS fold 132 235 7.3E-9 T 13-10-2018 IPR013767 PAS fold GO:0006355 VEA_003810 54c6bb29e7b7a4b9e88eabb49399745c 365 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 354 1.4E-65 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VEA_003810 54c6bb29e7b7a4b9e88eabb49399745c 365 Gene3D G3DSA:2.40.30.170 48 270 4.6E-69 T 13-10-2018 VEA_003810 54c6bb29e7b7a4b9e88eabb49399745c 365 Gene3D G3DSA:1.10.287.470 91 150 4.6E-69 T 13-10-2018 VEA_003810 54c6bb29e7b7a4b9e88eabb49399745c 365 Gene3D G3DSA:2.40.50.100 57 189 4.6E-69 T 13-10-2018 VEA_003810 54c6bb29e7b7a4b9e88eabb49399745c 365 Gene3D G3DSA:2.40.420.20 271 352 4.6E-69 T 13-10-2018 VEA_003810 54c6bb29e7b7a4b9e88eabb49399745c 365 Pfam PF13437 HlyD family secretion protein 155 253 2.4E-8 T 13-10-2018 VEA_003810 54c6bb29e7b7a4b9e88eabb49399745c 365 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 346 361 2.4E-5 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VEA_003810 54c6bb29e7b7a4b9e88eabb49399745c 365 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 69 89 2.4E-5 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VEA_003810 54c6bb29e7b7a4b9e88eabb49399745c 365 SUPERFAMILY SSF111369 50 265 1.57E-26 T 13-10-2018 VEA_003810 54c6bb29e7b7a4b9e88eabb49399745c 365 Pfam PF13533 Biotin-lipoyl like 62 103 2.2E-11 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VEA_002189 8ea96e79120c9566b7a0c03f940360a0 711 Gene3D G3DSA:3.40.50.2300 1 129 1.1E-52 T 13-10-2018 VEA_002189 8ea96e79120c9566b7a0c03f940360a0 711 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 545 1.6E-189 T 13-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 VEA_002189 8ea96e79120c9566b7a0c03f940360a0 711 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 13-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 VEA_002189 8ea96e79120c9566b7a0c03f940360a0 711 PIRSF PIRSF009393 1 711 2.0E-289 T 13-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 VEA_002189 8ea96e79120c9566b7a0c03f940360a0 711 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 570 700 2.9E-46 T 13-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 VEA_002189 8ea96e79120c9566b7a0c03f940360a0 711 SUPERFAMILY SSF53383 130 562 3.02E-106 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_002189 8ea96e79120c9566b7a0c03f940360a0 711 Gene3D G3DSA:3.90.100.10 595 711 2.4E-46 T 13-10-2018 VEA_002189 8ea96e79120c9566b7a0c03f940360a0 711 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 14 124 1.2E-28 T 13-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 VEA_002189 8ea96e79120c9566b7a0c03f940360a0 711 Gene3D G3DSA:3.40.640.10 130 424 4.0E-91 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_002189 8ea96e79120c9566b7a0c03f940360a0 711 SUPERFAMILY SSF55904 568 708 7.85E-43 T 13-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 VEA_002189 8ea96e79120c9566b7a0c03f940360a0 711 Gene3D G3DSA:3.90.1150.10 425 594 9.3E-71 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEA_001637 37fa9021a67ae6b2931873f9ee9b2be8 211 Pfam PF02734 DAK2 domain 33 205 2.0E-54 T 13-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 VEA_001637 37fa9021a67ae6b2931873f9ee9b2be8 211 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 9 205 1.4E-78 T 13-10-2018 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 KEGG: 00561+2.7.1.121 VEA_001637 37fa9021a67ae6b2931873f9ee9b2be8 211 Gene3D G3DSA:1.25.40.340 1 209 2.5E-68 T 13-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 VEA_001637 37fa9021a67ae6b2931873f9ee9b2be8 211 SMART SM01120 32 206 2.1E-78 T 13-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 VEA_001637 37fa9021a67ae6b2931873f9ee9b2be8 211 SUPERFAMILY SSF101473 2 207 7.72E-58 T 13-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 VEA_003103 31b08674fcf78a91d0b6287da887ab10 377 PIRSF PIRSF038941 1 372 5.5E-125 T 13-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 VEA_003103 31b08674fcf78a91d0b6287da887ab10 377 Gene3D G3DSA:2.40.37.10 7 372 2.0E-141 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VEA_003103 31b08674fcf78a91d0b6287da887ab10 377 SUPERFAMILY SSF51419 14 242 2.03E-41 T 13-10-2018 IPR029066 PLP-binding barrel VEA_003103 31b08674fcf78a91d0b6287da887ab10 377 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 6 370 1.9E-161 T 13-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 VEA_003103 31b08674fcf78a91d0b6287da887ab10 377 SUPERFAMILY SSF50621 212 359 5.44E-23 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VEA_003103 31b08674fcf78a91d0b6287da887ab10 377 Gene3D G3DSA:3.20.20.10 15 242 2.0E-141 T 13-10-2018 IPR029066 PLP-binding barrel VEA_003103 31b08674fcf78a91d0b6287da887ab10 377 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 243 327 2.8E-4 T 13-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 VEA_003377 1ef6fb92e48b5b17f3bf119d2243905a 399 Pfam PF04888 Secretion system effector C (SseC) like family 116 394 1.0E-47 T 13-10-2018 IPR006972 Secretion system effector C, SseC-like GO:0009405 VEA_000256 6fa236c82c6b02dd7383647269f8566b 448 SUPERFAMILY SSF158791 19 137 6.15E-11 T 13-10-2018 VEA_000256 6fa236c82c6b02dd7383647269f8566b 448 Gene3D G3DSA:1.10.357.20 274 447 3.7E-45 T 13-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain VEA_000256 6fa236c82c6b02dd7383647269f8566b 448 SMART SM00924 37 140 9.4E-5 T 13-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain VEA_000256 6fa236c82c6b02dd7383647269f8566b 448 SUPERFAMILY SSF161093 280 447 7.59E-44 T 13-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 VEA_000256 6fa236c82c6b02dd7383647269f8566b 448 Pfam PF01769 Divalent cation transporter 319 440 7.4E-24 T 13-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VEA_000256 6fa236c82c6b02dd7383647269f8566b 448 Pfam PF03448 MgtE intracellular N domain 38 138 4.9E-13 T 13-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain VEA_000622 8f96f51e9c69f24b5bb9f96dfa0f33cd 311 SUPERFAMILY SSF53850 88 304 7.36E-39 T 13-10-2018 VEA_000622 8f96f51e9c69f24b5bb9f96dfa0f33cd 311 Gene3D G3DSA:3.40.190.10 91 299 4.2E-64 T 13-10-2018 VEA_000622 8f96f51e9c69f24b5bb9f96dfa0f33cd 311 Gene3D G3DSA:1.10.10.10 3 88 1.8E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000622 8f96f51e9c69f24b5bb9f96dfa0f33cd 311 Gene3D G3DSA:3.40.190.10 163 272 4.2E-64 T 13-10-2018 VEA_000622 8f96f51e9c69f24b5bb9f96dfa0f33cd 311 Pfam PF03466 LysR substrate binding domain 89 301 1.7E-41 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_000622 8f96f51e9c69f24b5bb9f96dfa0f33cd 311 SUPERFAMILY SSF46785 4 111 9.33E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000622 8f96f51e9c69f24b5bb9f96dfa0f33cd 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 4.3E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_003546 3ef7134a00947f8242660e24bce37a23 171 Pfam PF13505 Outer membrane protein beta-barrel domain 6 170 4.8E-19 T 13-10-2018 IPR027385 Outer membrane protein beta-barrel VEA_003546 3ef7134a00947f8242660e24bce37a23 171 Gene3D G3DSA:2.40.160.20 18 170 4.2E-27 T 13-10-2018 VEA_003546 3ef7134a00947f8242660e24bce37a23 171 SUPERFAMILY SSF56925 17 170 3.4E-28 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VEA_003820 e15f9a5e850d070220951b8ff59b40b5 263 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_003820 e15f9a5e850d070220951b8ff59b40b5 263 Pfam PF00005 ABC transporter 30 178 4.0E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_003820 e15f9a5e850d070220951b8ff59b40b5 263 SMART SM00382 38 227 5.3E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_003820 e15f9a5e850d070220951b8ff59b40b5 263 Gene3D G3DSA:3.40.50.300 1 263 5.4E-69 T 13-10-2018 VEA_003820 e15f9a5e850d070220951b8ff59b40b5 263 SUPERFAMILY SSF52540 3 253 1.66E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001806 352b7d93f7162d51532f7bc8e514f55a 297 SUPERFAMILY SSF53328 30 194 5.63E-23 T 13-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VEA_001806 352b7d93f7162d51532f7bc8e514f55a 297 Pfam PF00551 Formyl transferase 89 141 2.4E-12 T 13-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VEA_001806 352b7d93f7162d51532f7bc8e514f55a 297 Pfam PF02911 Formyl transferase, C-terminal domain 196 277 1.5E-10 T 13-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VEA_001806 352b7d93f7162d51532f7bc8e514f55a 297 SUPERFAMILY SSF50486 197 277 2.94E-13 T 13-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 VEA_001806 352b7d93f7162d51532f7bc8e514f55a 297 Gene3D G3DSA:3.40.50.12230 3 292 1.1E-37 T 13-10-2018 VEA_002037 1f02f3534f9e5ff365389175ed84c994 515 Gene3D G3DSA:3.40.50.1100 26 328 9.6E-135 T 13-10-2018 VEA_002037 1f02f3534f9e5ff365389175ed84c994 515 SUPERFAMILY SSF53686 16 366 8.64E-108 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VEA_002037 1f02f3534f9e5ff365389175ed84c994 515 SUPERFAMILY SSF55021 421 514 7.1E-27 T 13-10-2018 VEA_002037 1f02f3534f9e5ff365389175ed84c994 515 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 16 514 1.4E-250 T 13-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 VEA_002037 1f02f3534f9e5ff365389175ed84c994 515 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 54 67 - T 13-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 VEA_002037 1f02f3534f9e5ff365389175ed84c994 515 Gene3D G3DSA:3.40.1020.10 339 515 7.0E-72 T 13-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 VEA_002037 1f02f3534f9e5ff365389175ed84c994 515 Gene3D G3DSA:3.40.50.1100 62 158 9.6E-135 T 13-10-2018 VEA_002037 1f02f3534f9e5ff365389175ed84c994 515 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 428 514 1.3E-26 T 13-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 VEA_002037 1f02f3534f9e5ff365389175ed84c994 515 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 330 420 1.6E-25 T 13-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 VEA_002037 1f02f3534f9e5ff365389175ed84c994 515 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 30 317 3.3E-85 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VEA_002037 1f02f3534f9e5ff365389175ed84c994 515 SUPERFAMILY SSF55021 338 424 1.1E-27 T 13-10-2018 VEA_000971 c61e32042c723621e3bc57d40652b93c 553 SMART SM00304 222 276 3.5E-9 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_000971 c61e32042c723621e3bc57d40652b93c 553 SMART SM00283 291 552 9.9E-76 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_000971 c61e32042c723621e3bc57d40652b93c 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 2 27 2.7E-20 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEA_000971 c61e32042c723621e3bc57d40652b93c 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 389 416 2.7E-20 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEA_000971 c61e32042c723621e3bc57d40652b93c 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 418 447 2.7E-20 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEA_000971 c61e32042c723621e3bc57d40652b93c 553 Pfam PF17200 Single Cache domain 2 48 187 3.1E-30 T 13-10-2018 IPR033480 Single Cache domain 2 VEA_000971 c61e32042c723621e3bc57d40652b93c 553 SMART SM01049 44 130 3.6E-21 T 13-10-2018 IPR033480 Single Cache domain 2 VEA_000971 c61e32042c723621e3bc57d40652b93c 553 Gene3D G3DSA:1.10.287.950 221 553 1.4E-72 T 13-10-2018 VEA_000971 c61e32042c723621e3bc57d40652b93c 553 SUPERFAMILY SSF58104 244 553 1.83E-75 T 13-10-2018 VEA_000971 c61e32042c723621e3bc57d40652b93c 553 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 335 518 1.9E-41 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_000971 c61e32042c723621e3bc57d40652b93c 553 Gene3D G3DSA:3.30.450.20 29 202 5.9E-36 T 13-10-2018 VEA_002990 40be35effdb0d953c4c9329fb614ca65 193 Gene3D G3DSA:3.90.950.10 5 193 1.6E-56 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VEA_002990 40be35effdb0d953c4c9329fb614ca65 193 Hamap MF_00528 Septum formation protein Maf [maf]. 5 192 28.802 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 VEA_002990 40be35effdb0d953c4c9329fb614ca65 193 Pfam PF02545 Maf-like protein 5 186 1.4E-43 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 VEA_002990 40be35effdb0d953c4c9329fb614ca65 193 SUPERFAMILY SSF52972 1 185 1.11E-57 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VEA_002990 40be35effdb0d953c4c9329fb614ca65 193 TIGRFAM TIGR00172 maf: septum formation protein Maf 4 185 2.1E-51 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 VEA_002990 40be35effdb0d953c4c9329fb614ca65 193 PIRSF PIRSF006305 1 192 3.2E-43 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 VEA_002414 8702e32e725a4dbb84ac36bc20f6d65e 84 SUPERFAMILY SSF82657 4 82 3.79E-28 T 13-10-2018 IPR036065 BolA-like superfamily VEA_002414 8702e32e725a4dbb84ac36bc20f6d65e 84 PIRSF PIRSF003113 2 83 8.5E-23 T 13-10-2018 IPR002634 BolA protein VEA_002414 8702e32e725a4dbb84ac36bc20f6d65e 84 Gene3D G3DSA:3.30.300.90 1 84 3.9E-33 T 13-10-2018 VEA_002414 8702e32e725a4dbb84ac36bc20f6d65e 84 Pfam PF01722 BolA-like protein 18 74 2.2E-14 T 13-10-2018 IPR002634 BolA protein VEA_002872 1a29cc9879a09d9e0330fd9fe3ee71f3 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 319 2.0E-61 T 13-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VEA_002872 1a29cc9879a09d9e0330fd9fe3ee71f3 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 120 9.5E-32 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VEA_002872 1a29cc9879a09d9e0330fd9fe3ee71f3 337 Gene3D G3DSA:3.40.50.720 7 330 5.0E-152 T 13-10-2018 VEA_002872 1a29cc9879a09d9e0330fd9fe3ee71f3 337 SUPERFAMILY SSF55347 131 320 2.98E-78 T 13-10-2018 VEA_002872 1a29cc9879a09d9e0330fd9fe3ee71f3 337 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 333 36.331 T 13-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VEA_002872 1a29cc9879a09d9e0330fd9fe3ee71f3 337 SMART SM00859 6 121 7.3E-40 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VEA_002872 1a29cc9879a09d9e0330fd9fe3ee71f3 337 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 334 1.6E-129 T 13-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VEA_002872 1a29cc9879a09d9e0330fd9fe3ee71f3 337 SUPERFAMILY SSF51735 5 159 2.18E-51 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_002872 1a29cc9879a09d9e0330fd9fe3ee71f3 337 Gene3D G3DSA:3.30.360.10 130 316 5.0E-152 T 13-10-2018 VEA_002872 1a29cc9879a09d9e0330fd9fe3ee71f3 337 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 232 246 - T 13-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VEA_002872 1a29cc9879a09d9e0330fd9fe3ee71f3 337 PIRSF PIRSF000148 4 337 5.6E-134 T 13-10-2018 VEA_004348 d1d205e98847af331d6d462fd3a1bfb5 422 PIRSF PIRSF001549 2 422 2.4E-125 T 13-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 VEA_004348 d1d205e98847af331d6d462fd3a1bfb5 422 SUPERFAMILY SSF55681 5 320 2.79E-104 T 13-10-2018 VEA_004348 d1d205e98847af331d6d462fd3a1bfb5 422 Pfam PF13393 Histidyl-tRNA synthetase 10 312 3.3E-46 T 13-10-2018 VEA_004348 d1d205e98847af331d6d462fd3a1bfb5 422 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 420 33.841 T 13-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 VEA_004348 d1d205e98847af331d6d462fd3a1bfb5 422 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 409 4.4E-159 T 13-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 VEA_004348 d1d205e98847af331d6d462fd3a1bfb5 422 Gene3D G3DSA:3.40.50.800 326 421 1.2E-25 T 13-10-2018 IPR036621 Anticodon-binding domain superfamily VEA_004348 d1d205e98847af331d6d462fd3a1bfb5 422 Pfam PF03129 Anticodon binding domain 329 420 3.3E-11 T 13-10-2018 IPR004154 Anticodon-binding VEA_004348 d1d205e98847af331d6d462fd3a1bfb5 422 Gene3D G3DSA:3.30.930.10 2 323 2.4E-120 T 13-10-2018 VEA_004348 d1d205e98847af331d6d462fd3a1bfb5 422 SUPERFAMILY SSF52954 327 421 9.98E-27 T 13-10-2018 VEA_001741 2d175bb8a55ff69ba74ee7ff553af54c 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 12 197 2.4E-76 T 13-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001741 2d175bb8a55ff69ba74ee7ff553af54c 200 Gene3D G3DSA:3.40.1370.10 5 200 4.0E-70 T 13-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 VEA_001741 2d175bb8a55ff69ba74ee7ff553af54c 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 200 33.872 T 13-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001741 2d175bb8a55ff69ba74ee7ff553af54c 200 SUPERFAMILY SSF52166 9 199 4.06E-73 T 13-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 VEA_001741 2d175bb8a55ff69ba74ee7ff553af54c 200 Pfam PF00573 Ribosomal protein L4/L1 family 12 197 1.4E-65 T 13-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 VEA_000104 0bb780fdc1c147675c469ed75eacff32 1102 PRINTS PR00702 Acriflavin resistance protein family signature 397 421 5.4E-27 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_000104 0bb780fdc1c147675c469ed75eacff32 1102 PRINTS PR00702 Acriflavin resistance protein family signature 476 499 5.4E-27 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_000104 0bb780fdc1c147675c469ed75eacff32 1102 PRINTS PR00702 Acriflavin resistance protein family signature 43 61 5.4E-27 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_000104 0bb780fdc1c147675c469ed75eacff32 1102 PRINTS PR00702 Acriflavin resistance protein family signature 451 474 5.4E-27 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_000104 0bb780fdc1c147675c469ed75eacff32 1102 PRINTS PR00702 Acriflavin resistance protein family signature 15 39 5.4E-27 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_000104 0bb780fdc1c147675c469ed75eacff32 1102 PRINTS PR00702 Acriflavin resistance protein family signature 343 366 5.4E-27 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_000104 0bb780fdc1c147675c469ed75eacff32 1102 SUPERFAMILY SSF82714 735 806 8.5E-7 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_000104 0bb780fdc1c147675c469ed75eacff32 1102 Gene3D G3DSA:3.30.2090.10 185 275 3.5E-220 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_000104 0bb780fdc1c147675c469ed75eacff32 1102 Gene3D G3DSA:3.30.70.1430 570 678 3.5E-220 T 13-10-2018 VEA_000104 0bb780fdc1c147675c469ed75eacff32 1102 Gene3D G3DSA:1.20.1640.10 21 517 3.5E-220 T 13-10-2018 VEA_000104 0bb780fdc1c147675c469ed75eacff32 1102 Gene3D G3DSA:3.30.70.1320 139 339 3.5E-220 T 13-10-2018 VEA_000104 0bb780fdc1c147675c469ed75eacff32 1102 Gene3D G3DSA:3.30.70.1440 679 919 3.5E-220 T 13-10-2018 VEA_000104 0bb780fdc1c147675c469ed75eacff32 1102 Gene3D G3DSA:3.30.2090.10 732 837 3.5E-220 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_000104 0bb780fdc1c147675c469ed75eacff32 1102 Gene3D G3DSA:3.30.70.1430 45 845 3.5E-220 T 13-10-2018 VEA_000104 0bb780fdc1c147675c469ed75eacff32 1102 SUPERFAMILY SSF82693 148 335 7.59E-9 T 13-10-2018 VEA_000104 0bb780fdc1c147675c469ed75eacff32 1102 SUPERFAMILY SSF82866 840 1088 8.63E-34 T 13-10-2018 VEA_000104 0bb780fdc1c147675c469ed75eacff32 1102 SUPERFAMILY SSF82693 568 669 3.4E-8 T 13-10-2018 VEA_000104 0bb780fdc1c147675c469ed75eacff32 1102 SUPERFAMILY SSF82693 45 139 8.89E-21 T 13-10-2018 VEA_000104 0bb780fdc1c147675c469ed75eacff32 1102 SUPERFAMILY SSF82866 302 502 1.7E-39 T 13-10-2018 VEA_000104 0bb780fdc1c147675c469ed75eacff32 1102 SUPERFAMILY SSF82714 190 271 5.49E-13 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_000104 0bb780fdc1c147675c469ed75eacff32 1102 Gene3D G3DSA:1.20.1640.10 518 1083 3.5E-220 T 13-10-2018 VEA_000104 0bb780fdc1c147675c469ed75eacff32 1102 Pfam PF00873 AcrB/AcrD/AcrF family 20 1085 4.7E-149 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_002569 5580eb563345c4de211c811b02bcac1d 776 Pfam PF07244 Surface antigen variable number repeat 360 429 3.4E-6 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VEA_002569 5580eb563345c4de211c811b02bcac1d 776 Gene3D G3DSA:3.10.20.310 354 429 1.0E-8 T 13-10-2018 VEA_002569 5580eb563345c4de211c811b02bcac1d 776 SUPERFAMILY SSF52151 43 329 9.68E-58 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VEA_002569 5580eb563345c4de211c811b02bcac1d 776 Gene3D G3DSA:3.40.1090.10 28 138 3.8E-28 T 13-10-2018 VEA_002569 5580eb563345c4de211c811b02bcac1d 776 Gene3D G3DSA:3.40.1090.10 153 294 1.4E-17 T 13-10-2018 VEA_002569 5580eb563345c4de211c811b02bcac1d 776 Pfam PF01734 Patatin-like phospholipase 49 239 2.8E-27 T 13-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 VEA_000310 e558421e6859a97e8012be42e4281c0e 433 Pfam PF13186 Iron-sulfur cluster-binding domain 317 377 2.2E-8 T 13-10-2018 IPR023885 4Fe4S-binding SPASM domain VEA_000310 e558421e6859a97e8012be42e4281c0e 433 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 194 431 2.0E-11 T 13-10-2018 VEA_000310 e558421e6859a97e8012be42e4281c0e 433 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 316 405 4.0E-18 T 13-10-2018 IPR023885 4Fe4S-binding SPASM domain VEA_000310 e558421e6859a97e8012be42e4281c0e 433 Gene3D G3DSA:3.20.20.70 31 426 5.2E-115 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_000310 e558421e6859a97e8012be42e4281c0e 433 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 34 423 1.9E-155 T 13-10-2018 VEA_000310 e558421e6859a97e8012be42e4281c0e 433 SUPERFAMILY SSF102114 40 386 6.67E-41 T 13-10-2018 VEA_000310 e558421e6859a97e8012be42e4281c0e 433 Pfam PF04055 Radical SAM superfamily 43 210 3.9E-13 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VEA_000310 e558421e6859a97e8012be42e4281c0e 433 Pfam PF13353 4Fe-4S single cluster domain 43 159 1.2E-4 T 13-10-2018 VEA_001636 1ef6c66d70c10b201706d709915ecdbc 799 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 166 173 - T 13-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VEA_001636 1ef6c66d70c10b201706d709915ecdbc 799 SUPERFAMILY SSF53062 1 127 4.97E-33 T 13-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 VEA_001636 1ef6c66d70c10b201706d709915ecdbc 799 Gene3D G3DSA:3.20.20.60 492 799 1.6E-109 T 13-10-2018 VEA_001636 1ef6c66d70c10b201706d709915ecdbc 799 PRINTS PR00107 Phosphocarrier protein signature 166 182 2.0E-7 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like VEA_001636 1ef6c66d70c10b201706d709915ecdbc 799 PRINTS PR00107 Phosphocarrier protein signature 191 206 2.0E-7 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like VEA_001636 1ef6c66d70c10b201706d709915ecdbc 799 PRINTS PR00107 Phosphocarrier protein signature 206 223 2.0E-7 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like VEA_001636 1ef6c66d70c10b201706d709915ecdbc 799 SUPERFAMILY SSF55594 157 240 1.44E-20 T 13-10-2018 IPR035895 HPr-like superfamily VEA_001636 1ef6c66d70c10b201706d709915ecdbc 799 Gene3D G3DSA:1.10.274.10 290 405 1.1E-61 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 VEA_001636 1ef6c66d70c10b201706d709915ecdbc 799 SUPERFAMILY SSF52009 384 504 2.88E-31 T 13-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 VEA_001636 1ef6c66d70c10b201706d709915ecdbc 799 Pfam PF03610 PTS system fructose IIA component 3 113 7.3E-24 T 13-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 VEA_001636 1ef6c66d70c10b201706d709915ecdbc 799 SUPERFAMILY SSF51621 514 797 2.36E-97 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VEA_001636 1ef6c66d70c10b201706d709915ecdbc 799 Pfam PF00381 PTS HPr component phosphorylation site 158 234 1.3E-18 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like VEA_001636 1ef6c66d70c10b201706d709915ecdbc 799 Pfam PF00391 PEP-utilising enzyme, mobile domain 410 483 1.4E-22 T 13-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VEA_001636 1ef6c66d70c10b201706d709915ecdbc 799 TIGRFAM TIGR02364 dha_pts: dihydroxyacetone kinase, phosphotransfer subunit 2 126 6.6E-37 T 13-10-2018 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain VEA_001636 1ef6c66d70c10b201706d709915ecdbc 799 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 551 570 1.0E-23 T 13-10-2018 VEA_001636 1ef6c66d70c10b201706d709915ecdbc 799 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 702 717 1.0E-23 T 13-10-2018 VEA_001636 1ef6c66d70c10b201706d709915ecdbc 799 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 755 767 1.0E-23 T 13-10-2018 VEA_001636 1ef6c66d70c10b201706d709915ecdbc 799 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 719 734 1.0E-23 T 13-10-2018 VEA_001636 1ef6c66d70c10b201706d709915ecdbc 799 SUPERFAMILY SSF47831 296 402 2.35E-23 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 VEA_001636 1ef6c66d70c10b201706d709915ecdbc 799 Gene3D G3DSA:3.50.30.10 273 491 1.1E-61 T 13-10-2018 VEA_001636 1ef6c66d70c10b201706d709915ecdbc 799 Gene3D G3DSA:3.40.50.510 1 130 6.8E-43 T 13-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 VEA_001636 1ef6c66d70c10b201706d709915ecdbc 799 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 702 720 - T 13-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 VEA_001636 1ef6c66d70c10b201706d709915ecdbc 799 Pfam PF05524 PEP-utilising enzyme, N-terminal 273 385 2.7E-23 T 13-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VEA_001636 1ef6c66d70c10b201706d709915ecdbc 799 Gene3D G3DSA:3.30.1340.10 155 241 4.4E-22 T 13-10-2018 IPR035895 HPr-like superfamily VEA_001636 1ef6c66d70c10b201706d709915ecdbc 799 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 271 797 8.2E-142 T 13-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 VEA_001636 1ef6c66d70c10b201706d709915ecdbc 799 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 158 233 6.6E-17 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like VEA_001636 1ef6c66d70c10b201706d709915ecdbc 799 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 514 796 3.2E-98 T 13-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 VEA_001636 1ef6c66d70c10b201706d709915ecdbc 799 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 442 453 - T 13-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 VEA_000974 67fc0799b38573b2aeff58adbf952a23 263 SMART SM00448 5 117 8.7E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_000974 67fc0799b38573b2aeff58adbf952a23 263 Pfam PF04397 LytTr DNA-binding domain 165 262 4.3E-24 T 13-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 VEA_000974 67fc0799b38573b2aeff58adbf952a23 263 SUPERFAMILY SSF52172 4 156 1.99E-31 T 13-10-2018 IPR011006 CheY-like superfamily VEA_000974 67fc0799b38573b2aeff58adbf952a23 263 SMART SM00850 164 263 4.9E-18 T 13-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 VEA_000974 67fc0799b38573b2aeff58adbf952a23 263 Gene3D G3DSA:3.40.50.2300 2 139 6.1E-33 T 13-10-2018 VEA_000974 67fc0799b38573b2aeff58adbf952a23 263 Pfam PF00072 Response regulator receiver domain 8 116 5.1E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_000974 67fc0799b38573b2aeff58adbf952a23 263 Gene3D G3DSA:2.40.50.40 156 228 7.1E-9 T 13-10-2018 VEA_000014 dcb36ce1eb0c528c5ed9e6eb619907ed 429 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 7 427 2.1E-122 T 13-10-2018 IPR010263 Type VI secretion protein, VC_A0114 VEA_000014 dcb36ce1eb0c528c5ed9e6eb619907ed 429 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 1 428 1.3E-134 T 13-10-2018 IPR010263 Type VI secretion protein, VC_A0114 VEA_001393 54d89902ca4b4b373f891ca38593401e 440 PRINTS PR00410 Phenol hydroxylase reductase family signature 322 341 8.7E-5 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VEA_001393 54d89902ca4b4b373f891ca38593401e 440 PRINTS PR00410 Phenol hydroxylase reductase family signature 404 412 8.7E-5 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VEA_001393 54d89902ca4b4b373f891ca38593401e 440 PRINTS PR00410 Phenol hydroxylase reductase family signature 251 263 8.7E-5 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VEA_001393 54d89902ca4b4b373f891ca38593401e 440 Pfam PF00175 Oxidoreductase NAD-binding domain 324 415 1.4E-5 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VEA_001393 54d89902ca4b4b373f891ca38593401e 440 SUPERFAMILY SSF52343 315 435 5.11E-20 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VEA_001393 54d89902ca4b4b373f891ca38593401e 440 Gene3D G3DSA:3.40.50.80 313 440 9.6E-18 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VEA_001393 54d89902ca4b4b373f891ca38593401e 440 SUPERFAMILY SSF63380 217 312 9.41E-15 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VEA_001393 54d89902ca4b4b373f891ca38593401e 440 Pfam PF08022 FAD-binding domain 251 312 1.7E-8 T 13-10-2018 IPR013112 FAD-binding 8 GO:0016491|GO:0055114 VEA_001393 54d89902ca4b4b373f891ca38593401e 440 Gene3D G3DSA:2.40.30.10 210 311 1.1E-13 T 13-10-2018 VEA_001393 54d89902ca4b4b373f891ca38593401e 440 Pfam PF01794 Ferric reductase like transmembrane component 35 171 2.9E-18 T 13-10-2018 IPR013130 Ferric reductase transmembrane component-like domain VEA_002176 7585f200f9ad3365571b54d2cf5401c9 265 Pfam PF00293 NUDIX domain 137 238 2.2E-17 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VEA_002176 7585f200f9ad3365571b54d2cf5401c9 265 ProSitePatterns PS00893 Nudix box signature. 164 185 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VEA_002176 7585f200f9ad3365571b54d2cf5401c9 265 Gene3D G3DSA:3.90.79.10 131 262 5.4E-40 T 13-10-2018 VEA_002176 7585f200f9ad3365571b54d2cf5401c9 265 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 101 129 4.7E-9 T 13-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 VEA_002176 7585f200f9ad3365571b54d2cf5401c9 265 Hamap MF_00297 NADH pyrophosphatase [nudC]. 3 262 43.484 T 13-10-2018 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 VEA_002176 7585f200f9ad3365571b54d2cf5401c9 265 Gene3D G3DSA:3.90.79.20 3 130 1.1E-31 T 13-10-2018 VEA_002176 7585f200f9ad3365571b54d2cf5401c9 265 SUPERFAMILY SSF55811 63 248 6.94E-43 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VEA_004078 d40501249d5481398d6472cb122160e5 407 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 363 7.0E-28 T 13-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal VEA_004078 d40501249d5481398d6472cb122160e5 407 SMART SM00825 Beta-ketoacyl synthase 5 347 5.0E-11 T 13-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VEA_004078 d40501249d5481398d6472cb122160e5 407 Gene3D G3DSA:3.40.47.10 1 255 6.2E-60 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VEA_004078 d40501249d5481398d6472cb122160e5 407 SUPERFAMILY SSF53901 215 406 1.2E-59 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VEA_004078 d40501249d5481398d6472cb122160e5 407 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 247 2.3E-40 T 13-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal VEA_004078 d40501249d5481398d6472cb122160e5 407 SUPERFAMILY SSF53901 3 252 6.29E-56 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VEA_004078 d40501249d5481398d6472cb122160e5 407 Gene3D G3DSA:3.40.47.10 261 407 2.7E-43 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VEA_004078 d40501249d5481398d6472cb122160e5 407 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 156 172 - T 13-10-2018 IPR018201 Beta-ketoacyl synthase, active site VEA_003866 ef33f6fe34cd2fcaffd083e757071382 289 Hamap MF_00188 Protease HtpX [htpX]. 1 287 25.142 T 13-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 VEA_003866 ef33f6fe34cd2fcaffd083e757071382 289 Pfam PF01435 Peptidase family M48 78 286 4.5E-41 T 13-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 VEA_003866 ef33f6fe34cd2fcaffd083e757071382 289 Gene3D G3DSA:3.30.2010.10 68 161 8.6E-38 T 13-10-2018 VEA_002280 0b4a3d5808d76027a6fb61dea7cf2ef0 289 Gene3D G3DSA:3.40.50.300 1 289 9.9E-112 T 13-10-2018 VEA_002280 0b4a3d5808d76027a6fb61dea7cf2ef0 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 1.2E-27 T 13-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 VEA_002280 0b4a3d5808d76027a6fb61dea7cf2ef0 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 1.2E-27 T 13-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 VEA_002280 0b4a3d5808d76027a6fb61dea7cf2ef0 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 1.2E-27 T 13-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 VEA_002280 0b4a3d5808d76027a6fb61dea7cf2ef0 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 1.2E-27 T 13-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 VEA_002280 0b4a3d5808d76027a6fb61dea7cf2ef0 289 SUPERFAMILY SSF52540 4 286 1.66E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002280 0b4a3d5808d76027a6fb61dea7cf2ef0 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 1.8E-70 T 13-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 VEA_000306 370539ac4407c9c61cec63c4c1ebc87f 356 SMART SM00327 105 306 1.4E-23 T 13-10-2018 IPR002035 von Willebrand factor, type A VEA_000306 370539ac4407c9c61cec63c4c1ebc87f 356 Pfam PF00092 von Willebrand factor type A domain 107 297 5.9E-25 T 13-10-2018 IPR002035 von Willebrand factor, type A VEA_000306 370539ac4407c9c61cec63c4c1ebc87f 356 Gene3D G3DSA:3.40.50.410 105 306 1.2E-51 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VEA_000306 370539ac4407c9c61cec63c4c1ebc87f 356 SUPERFAMILY SSF53300 103 302 1.48E-35 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VEA_000711 8db018d2f4324954220a1fc700ba4555 356 SUPERFAMILY SSF51412 10 330 8.7E-60 T 13-10-2018 VEA_000711 8db018d2f4324954220a1fc700ba4555 356 Pfam PF03060 Nitronate monooxygenase 8 346 4.7E-70 T 13-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 VEA_000711 8db018d2f4324954220a1fc700ba4555 356 Gene3D G3DSA:3.20.20.70 5 352 6.6E-106 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_001614 c305b0806a6254003c3bb83c15cec6ac 406 Pfam PF01966 HD domain 229 323 7.2E-9 T 13-10-2018 IPR006674 HD domain VEA_001614 c305b0806a6254003c3bb83c15cec6ac 406 SUPERFAMILY SSF81301 2 119 1.42E-30 T 13-10-2018 VEA_001614 c305b0806a6254003c3bb83c15cec6ac 406 Gene3D G3DSA:1.10.3090.10 122 403 6.1E-46 T 13-10-2018 VEA_001614 c305b0806a6254003c3bb83c15cec6ac 406 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 406 51.989 T 13-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 VEA_001614 c305b0806a6254003c3bb83c15cec6ac 406 Gene3D G3DSA:3.30.460.10 1 121 5.7E-29 T 13-10-2018 VEA_001614 c305b0806a6254003c3bb83c15cec6ac 406 Pfam PF01743 Poly A polymerase head domain 3 122 7.9E-20 T 13-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 VEA_001614 c305b0806a6254003c3bb83c15cec6ac 406 SUPERFAMILY SSF81891 120 400 5.49E-55 T 13-10-2018 VEA_001614 c305b0806a6254003c3bb83c15cec6ac 406 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 1.1E-13 T 13-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 VEA_001614 c305b0806a6254003c3bb83c15cec6ac 406 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 42.061 T 13-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 VEA_001614 c305b0806a6254003c3bb83c15cec6ac 406 PIRSF PIRSF000813 1 406 1.7E-203 T 13-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 VEA_000660 74871ce6f9aaa8e043825ed79379760e 242 Gene3D G3DSA:1.10.10.10 13 80 2.0E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000660 74871ce6f9aaa8e043825ed79379760e 242 SMART SM00866 96 235 1.1E-21 T 13-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VEA_000660 74871ce6f9aaa8e043825ed79379760e 242 SMART SM00345 16 75 5.8E-15 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_000660 74871ce6f9aaa8e043825ed79379760e 242 SUPERFAMILY SSF46785 15 89 1.0E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000660 74871ce6f9aaa8e043825ed79379760e 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 75 1.7E-17 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_000660 74871ce6f9aaa8e043825ed79379760e 242 SUPERFAMILY SSF64288 63 238 4.71E-37 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VEA_000660 74871ce6f9aaa8e043825ed79379760e 242 Gene3D G3DSA:3.40.1410.10 85 240 1.7E-31 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VEA_000660 74871ce6f9aaa8e043825ed79379760e 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 2.5E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_000660 74871ce6f9aaa8e043825ed79379760e 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 2.5E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_000660 74871ce6f9aaa8e043825ed79379760e 242 Pfam PF07702 UTRA domain 97 234 7.7E-33 T 13-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VEA_000815 a337af09e0568f9fa9410387c0761e47 449 SMART SM00382 168 308 7.5E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_000815 a337af09e0568f9fa9410387c0761e47 449 Gene3D G3DSA:3.40.50.2300 5 138 2.3E-32 T 13-10-2018 VEA_000815 a337af09e0568f9fa9410387c0761e47 449 SUPERFAMILY SSF52172 7 192 1.34E-39 T 13-10-2018 IPR011006 CheY-like superfamily VEA_000815 a337af09e0568f9fa9410387c0761e47 449 Gene3D G3DSA:3.40.50.300 139 315 9.8E-58 T 13-10-2018 VEA_000815 a337af09e0568f9fa9410387c0761e47 449 SUPERFAMILY SSF52540 148 371 4.25E-60 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000815 a337af09e0568f9fa9410387c0761e47 449 SUPERFAMILY SSF46689 391 443 8.51E-7 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_000815 a337af09e0568f9fa9410387c0761e47 449 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VEA_000815 a337af09e0568f9fa9410387c0761e47 449 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 234 249 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VEA_000815 a337af09e0568f9fa9410387c0761e47 449 Pfam PF02954 Bacterial regulatory protein, Fis family 402 441 2.1E-5 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEA_000815 a337af09e0568f9fa9410387c0761e47 449 Gene3D G3DSA:1.10.10.60 382 446 2.2E-6 T 13-10-2018 VEA_000815 a337af09e0568f9fa9410387c0761e47 449 SMART SM00448 7 118 2.3E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_000815 a337af09e0568f9fa9410387c0761e47 449 Pfam PF00072 Response regulator receiver domain 9 118 1.1E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_000815 a337af09e0568f9fa9410387c0761e47 449 Gene3D G3DSA:1.10.8.60 316 377 1.0E-12 T 13-10-2018 VEA_000815 a337af09e0568f9fa9410387c0761e47 449 Pfam PF00158 Sigma-54 interaction domain 148 311 2.0E-64 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VEA_000629 737377bb948b3c017a7cfbc02c5deb17 425 PIRSF PIRSF006066 1 425 9.3E-114 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VEA_000629 737377bb948b3c017a7cfbc02c5deb17 425 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 414 3.0E-99 T 13-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VEA_000629 737377bb948b3c017a7cfbc02c5deb17 425 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 16 419 2.2E-103 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VEA_003010 5c44e6571346b9eddd0b66e428fa9f9a 383 Gene3D G3DSA:3.40.1090.10 140 258 3.1E-6 T 13-10-2018 VEA_003010 5c44e6571346b9eddd0b66e428fa9f9a 383 Gene3D G3DSA:3.40.1090.10 15 124 2.8E-10 T 13-10-2018 VEA_003010 5c44e6571346b9eddd0b66e428fa9f9a 383 SUPERFAMILY SSF52151 25 306 3.92E-35 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VEA_003010 5c44e6571346b9eddd0b66e428fa9f9a 383 Pfam PF01734 Patatin-like phospholipase 30 199 3.8E-19 T 13-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 VEA_002863 2e0f57df42b829c6a044eb5a3b12c041 361 PIRSF PIRSF001456 3 360 3.0E-142 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VEA_002863 2e0f57df42b829c6a044eb5a3b12c041 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 4.9E-143 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VEA_002863 2e0f57df42b829c6a044eb5a3b12c041 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 13-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VEA_002863 2e0f57df42b829c6a044eb5a3b12c041 361 Gene3D G3DSA:3.60.150.10 1 361 5.3E-160 T 13-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VEA_002863 2e0f57df42b829c6a044eb5a3b12c041 361 SUPERFAMILY SSF103263 4 354 9.68E-150 T 13-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VEA_002863 2e0f57df42b829c6a044eb5a3b12c041 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 13-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VEA_002863 2e0f57df42b829c6a044eb5a3b12c041 361 Pfam PF01264 Chorismate synthase 10 345 1.6E-143 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VEA_002863 2e0f57df42b829c6a044eb5a3b12c041 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 13-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VEA_002863 2e0f57df42b829c6a044eb5a3b12c041 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.633 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VEA_002048 cdb5d0d957da1d85eeee289741e1551d 88 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 4.6E-46 T 13-10-2018 IPR009383 Protein of unknown function DUF1040 VEA_002048 cdb5d0d957da1d85eeee289741e1551d 88 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 1.0E-37 T 13-10-2018 IPR009383 Protein of unknown function DUF1040 VEA_002048 cdb5d0d957da1d85eeee289741e1551d 88 Gene3D G3DSA:1.10.1580.20 1 88 9.8E-44 T 13-10-2018 IPR038134 YihD-like superfamily VEA_000914 7e261d3cf0224cd78b69622e247c6dce 742 Gene3D G3DSA:2.160.20.10 377 733 5.1E-65 T 13-10-2018 IPR012334 Pectin lyase fold VEA_000914 7e261d3cf0224cd78b69622e247c6dce 742 SUPERFAMILY SSF51126 378 705 3.0E-47 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor VEA_000676 7f7881d8857ab643b61a185f7339eb35 402 Gene3D G3DSA:1.20.1250.20 8 385 2.0E-23 T 13-10-2018 VEA_000676 7f7881d8857ab643b61a185f7339eb35 402 SUPERFAMILY SSF103473 9 388 1.16E-33 T 13-10-2018 IPR036259 MFS transporter superfamily VEA_000676 7f7881d8857ab643b61a185f7339eb35 402 Pfam PF07690 Major Facilitator Superfamily 13 292 8.8E-10 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEA_004226 11472fbb857a546d6605b1290d35c13f 92 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 6 92 26.481 T 13-10-2018 IPR007454 Uncharacterised protein family UPF0250 VEA_004226 11472fbb857a546d6605b1290d35c13f 92 Pfam PF04359 Protein of unknown function (DUF493) 12 92 2.3E-29 T 13-10-2018 IPR007454 Uncharacterised protein family UPF0250 VEA_004226 11472fbb857a546d6605b1290d35c13f 92 Gene3D G3DSA:3.30.70.260 6 92 2.4E-33 T 13-10-2018 VEA_004226 11472fbb857a546d6605b1290d35c13f 92 SUPERFAMILY SSF117991 7 92 2.62E-31 T 13-10-2018 IPR027471 YbeD-like domain superfamily VEA_002333 2f24854a804ab6b403545cb928bd4d04 100 Pfam PF00436 Single-strand binding protein family 3 88 1.1E-6 T 13-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 VEA_002333 2f24854a804ab6b403545cb928bd4d04 100 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 3 100 1.9E-30 T 13-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 VEA_002333 2f24854a804ab6b403545cb928bd4d04 100 SUPERFAMILY SSF50249 1 99 1.17E-24 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_002333 2f24854a804ab6b403545cb928bd4d04 100 Gene3D G3DSA:2.40.50.140 1 100 2.1E-27 T 13-10-2018 VEA_002333 2f24854a804ab6b403545cb928bd4d04 100 PIRSF PIRSF003135 1 100 8.3E-45 T 13-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 VEA_002333 2f24854a804ab6b403545cb928bd4d04 100 Hamap MF_00720 Primosomal replication protein N [priB]. 2 100 22.312 T 13-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 VEA_001652 4995902f90a9368f510e816465f926dc 348 Gene3D G3DSA:3.40.50.2000 201 315 4.5E-6 T 13-10-2018 VEA_001652 4995902f90a9368f510e816465f926dc 348 Pfam PF13528 Glycosyl transferase family 1 1 300 1.8E-37 T 13-10-2018 VEA_001652 4995902f90a9368f510e816465f926dc 348 TIGRFAM TIGR00661 MJ1255: conserved hypothetical protein 2 311 2.4E-105 T 13-10-2018 IPR005262 Conserved hypothetical protein CHP00661 VEA_001652 4995902f90a9368f510e816465f926dc 348 SUPERFAMILY SSF53756 1 300 1.0E-10 T 13-10-2018 VEA_003433 cd5508508c680369f7ce0c6e3131ff4b 868 Gene3D G3DSA:1.10.1740.60 194 278 3.7E-40 T 13-10-2018 VEA_003433 cd5508508c680369f7ce0c6e3131ff4b 868 SUPERFAMILY SSF55486 202 449 5.86E-75 T 13-10-2018 VEA_003433 cd5508508c680369f7ce0c6e3131ff4b 868 Gene3D G3DSA:2.60.40.1840 443 544 6.5E-36 T 13-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily VEA_003433 cd5508508c680369f7ce0c6e3131ff4b 868 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 547 866 2.6E-115 T 13-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal VEA_003433 cd5508508c680369f7ce0c6e3131ff4b 868 Gene3D G3DSA:1.10.390.10 279 442 1.5E-64 T 13-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily VEA_003433 cd5508508c680369f7ce0c6e3131ff4b 868 Pfam PF01433 Peptidase family M1 domain 208 435 1.5E-57 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VEA_003433 cd5508508c680369f7ce0c6e3131ff4b 868 SUPERFAMILY SSF63737 2 192 2.75E-46 T 13-10-2018 VEA_003433 cd5508508c680369f7ce0c6e3131ff4b 868 Gene3D G3DSA:2.60.40.1730 15 193 1.5E-70 T 13-10-2018 VEA_003433 cd5508508c680369f7ce0c6e3131ff4b 868 Gene3D G3DSA:1.25.50.10 545 867 3.4E-117 T 13-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily VEA_003433 cd5508508c680369f7ce0c6e3131ff4b 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 312 324 4.3E-9 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VEA_003433 cd5508508c680369f7ce0c6e3131ff4b 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 175 190 4.3E-9 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VEA_003433 cd5508508c680369f7ce0c6e3131ff4b 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 293 308 4.3E-9 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VEA_003433 cd5508508c680369f7ce0c6e3131ff4b 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 257 267 4.3E-9 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VEA_003433 cd5508508c680369f7ce0c6e3131ff4b 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 125 140 4.3E-9 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VEA_003433 cd5508508c680369f7ce0c6e3131ff4b 868 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 866 0.0 T 13-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 VEA_003433 cd5508508c680369f7ce0c6e3131ff4b 868 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 443 544 1.3E-33 T 13-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold VEA_001328 2949b7ce99341cd27febf860a35b8ba0 392 PRINTS PR00181 Maltose binding protein signature 167 186 2.4E-80 T 13-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VEA_001328 2949b7ce99341cd27febf860a35b8ba0 392 PRINTS PR00181 Maltose binding protein signature 32 50 2.4E-80 T 13-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VEA_001328 2949b7ce99341cd27febf860a35b8ba0 392 PRINTS PR00181 Maltose binding protein signature 229 248 2.4E-80 T 13-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VEA_001328 2949b7ce99341cd27febf860a35b8ba0 392 PRINTS PR00181 Maltose binding protein signature 66 84 2.4E-80 T 13-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VEA_001328 2949b7ce99341cd27febf860a35b8ba0 392 PRINTS PR00181 Maltose binding protein signature 147 166 2.4E-80 T 13-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VEA_001328 2949b7ce99341cd27febf860a35b8ba0 392 PRINTS PR00181 Maltose binding protein signature 126 145 2.4E-80 T 13-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VEA_001328 2949b7ce99341cd27febf860a35b8ba0 392 PRINTS PR00181 Maltose binding protein signature 295 316 2.4E-80 T 13-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VEA_001328 2949b7ce99341cd27febf860a35b8ba0 392 PRINTS PR00181 Maltose binding protein signature 353 372 2.4E-80 T 13-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VEA_001328 2949b7ce99341cd27febf860a35b8ba0 392 Gene3D G3DSA:3.40.190.10 44 353 1.8E-134 T 13-10-2018 VEA_001328 2949b7ce99341cd27febf860a35b8ba0 392 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 129 146 - T 13-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 VEA_001328 2949b7ce99341cd27febf860a35b8ba0 392 Gene3D G3DSA:3.40.190.10 134 384 1.8E-134 T 13-10-2018 VEA_001328 2949b7ce99341cd27febf860a35b8ba0 392 Pfam PF13416 Bacterial extracellular solute-binding protein 46 317 4.9E-44 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein VEA_001328 2949b7ce99341cd27febf860a35b8ba0 392 SUPERFAMILY SSF53850 24 391 1.55E-89 T 13-10-2018 VEA_000648 1ccf16ae8e0d642899edb5d1d93ec664 790 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 413 424 - T 13-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 VEA_000648 1ccf16ae8e0d642899edb5d1d93ec664 790 Gene3D G3DSA:3.30.1490.20 1 192 9.5E-74 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VEA_000648 1ccf16ae8e0d642899edb5d1d93ec664 790 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 693 711 - T 13-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 VEA_000648 1ccf16ae8e0d642899edb5d1d93ec664 790 PIRSF PIRSF000854 1 790 0.0 T 13-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 VEA_000648 1ccf16ae8e0d642899edb5d1d93ec664 790 SUPERFAMILY SSF51621 460 788 2.63E-98 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VEA_000648 1ccf16ae8e0d642899edb5d1d93ec664 790 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 6 787 0.0 T 13-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 VEA_000648 1ccf16ae8e0d642899edb5d1d93ec664 790 SUPERFAMILY SSF52009 348 465 3.14E-34 T 13-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 VEA_000648 1ccf16ae8e0d642899edb5d1d93ec664 790 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 481 781 5.0E-62 T 13-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 VEA_000648 1ccf16ae8e0d642899edb5d1d93ec664 790 Gene3D G3DSA:3.20.20.60 477 788 5.4E-104 T 13-10-2018 VEA_000648 1ccf16ae8e0d642899edb5d1d93ec664 790 Gene3D G3DSA:3.50.30.10 357 476 6.6E-41 T 13-10-2018 VEA_000648 1ccf16ae8e0d642899edb5d1d93ec664 790 Gene3D G3DSA:3.30.470.20 193 356 3.6E-59 T 13-10-2018 VEA_000648 1ccf16ae8e0d642899edb5d1d93ec664 790 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 17 345 1.1E-120 T 13-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 VEA_000648 1ccf16ae8e0d642899edb5d1d93ec664 790 SUPERFAMILY SSF56059 1 383 4.94E-108 T 13-10-2018 VEA_000648 1ccf16ae8e0d642899edb5d1d93ec664 790 Pfam PF00391 PEP-utilising enzyme, mobile domain 383 454 2.8E-26 T 13-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VEA_000069 091735e16905b004d2de550014fb03f2 107 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 4 106 1.8E-34 T 13-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 VEA_000069 091735e16905b004d2de550014fb03f2 107 Gene3D G3DSA:2.102.10.10 1 107 2.8E-32 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VEA_000069 091735e16905b004d2de550014fb03f2 107 SUPERFAMILY SSF50022 1 106 1.05E-34 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VEA_000069 091735e16905b004d2de550014fb03f2 107 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 105 2.9E-40 T 13-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 VEA_003896 ce43c5df9aa8ac76159fb96abaac561f 545 SMART SM00304 303 356 91.0 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_003896 ce43c5df9aa8ac76159fb96abaac561f 545 SMART SM00304 214 268 7.8E-14 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_003896 ce43c5df9aa8ac76159fb96abaac561f 545 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 331 510 7.2E-43 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_003896 ce43c5df9aa8ac76159fb96abaac561f 545 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 166 536 0.001 T 13-10-2018 VEA_003896 ce43c5df9aa8ac76159fb96abaac561f 545 SMART SM00283 283 544 9.4E-73 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_003896 ce43c5df9aa8ac76159fb96abaac561f 545 SUPERFAMILY SSF58104 236 545 2.75E-76 T 13-10-2018 VEA_003896 ce43c5df9aa8ac76159fb96abaac561f 545 Pfam PF00672 HAMP domain 215 264 4.0E-11 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_003896 ce43c5df9aa8ac76159fb96abaac561f 545 Gene3D G3DSA:1.10.287.950 213 545 2.3E-75 T 13-10-2018 VEA_003896 ce43c5df9aa8ac76159fb96abaac561f 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 458 487 1.3E-24 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEA_003896 ce43c5df9aa8ac76159fb96abaac561f 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 9 34 1.3E-24 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEA_003896 ce43c5df9aa8ac76159fb96abaac561f 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 381 408 1.3E-24 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEA_003896 ce43c5df9aa8ac76159fb96abaac561f 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 410 439 1.3E-24 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEA_002462 4d139c80d63103ebf0868a588c074703 316 SUPERFAMILY SSF52440 2 122 1.52E-46 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VEA_002462 4d139c80d63103ebf0868a588c074703 316 Gene3D G3DSA:3.30.470.20 197 300 1.9E-40 T 13-10-2018 VEA_002462 4d139c80d63103ebf0868a588c074703 316 SUPERFAMILY SSF56059 123 313 2.87E-59 T 13-10-2018 VEA_002462 4d139c80d63103ebf0868a588c074703 316 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 1.9E-80 T 13-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 VEA_002462 4d139c80d63103ebf0868a588c074703 316 Gene3D G3DSA:3.30.1490.20 137 196 3.4E-29 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VEA_002462 4d139c80d63103ebf0868a588c074703 316 Gene3D G3DSA:3.40.50.20 1 129 2.0E-52 T 13-10-2018 VEA_002462 4d139c80d63103ebf0868a588c074703 316 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 177.014 T 13-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 VEA_002462 4d139c80d63103ebf0868a588c074703 316 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 2.5E-48 T 13-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 VEA_002462 4d139c80d63103ebf0868a588c074703 316 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 311 4.0E-140 T 13-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 VEA_003163 57bf15f5276a7b8957d34444dced1a7c 458 Pfam PF04317 YcjX-like family, DUF463 20 457 6.0E-187 T 13-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein VEA_003163 57bf15f5276a7b8957d34444dced1a7c 458 PIRSF PIRSF019381 1 458 3.6E-198 T 13-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein VEA_001187 eabcb108aac6b6b6682a38cc939b7578 295 SUPERFAMILY SSF48029 1 70 3.4E-5 T 13-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical VEA_001187 eabcb108aac6b6b6682a38cc939b7578 295 Gene3D G3DSA:1.10.220.30 51 155 4.1E-22 T 13-10-2018 VEA_001187 eabcb108aac6b6b6682a38cc939b7578 295 Pfam PF01706 FliG C-terminal domain 180 286 1.6E-24 T 13-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal VEA_001187 eabcb108aac6b6b6682a38cc939b7578 295 Pfam PF14841 FliG middle domain 79 152 2.1E-19 T 13-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain VEA_001187 eabcb108aac6b6b6682a38cc939b7578 295 Gene3D G3DSA:1.10.220.30 158 291 1.2E-24 T 13-10-2018 VEA_001187 eabcb108aac6b6b6682a38cc939b7578 295 Pfam PF14842 FliG N-terminal domain 1 65 1.4E-9 T 13-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain VEA_001187 eabcb108aac6b6b6682a38cc939b7578 295 PRINTS PR00954 Flagellar motor switch protein FliG signature 77 100 3.7E-16 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VEA_001187 eabcb108aac6b6b6682a38cc939b7578 295 PRINTS PR00954 Flagellar motor switch protein FliG signature 234 260 3.7E-16 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VEA_001187 eabcb108aac6b6b6682a38cc939b7578 295 PRINTS PR00954 Flagellar motor switch protein FliG signature 188 208 3.7E-16 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VEA_001187 eabcb108aac6b6b6682a38cc939b7578 295 PRINTS PR00954 Flagellar motor switch protein FliG signature 210 230 3.7E-16 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VEA_001187 eabcb108aac6b6b6682a38cc939b7578 295 SUPERFAMILY SSF48029 78 286 1.7E-52 T 13-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical VEA_000686 3a71835b9f135eed5f805d573586d048 299 SUPERFAMILY SSF161098 99 281 4.97E-37 T 13-10-2018 IPR035906 MetI-like superfamily VEA_000686 3a71835b9f135eed5f805d573586d048 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 283 6.7E-27 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_000686 3a71835b9f135eed5f805d573586d048 299 Gene3D G3DSA:1.10.3720.10 96 288 1.1E-32 T 13-10-2018 IPR035906 MetI-like superfamily VEA_000226 d4ad106997084486054aaa247fb97447 1019 SUPERFAMILY SSF82693 41 135 4.53E-20 T 13-10-2018 VEA_000226 d4ad106997084486054aaa247fb97447 1019 Gene3D G3DSA:3.30.70.1430 556 654 7.2E-268 T 13-10-2018 VEA_000226 d4ad106997084486054aaa247fb97447 1019 Pfam PF00873 AcrB/AcrD/AcrF family 3 1011 7.1E-179 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_000226 d4ad106997084486054aaa247fb97447 1019 SUPERFAMILY SSF82714 185 266 2.62E-13 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_000226 d4ad106997084486054aaa247fb97447 1019 Gene3D G3DSA:3.30.2090.10 706 796 7.2E-268 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_000226 d4ad106997084486054aaa247fb97447 1019 Gene3D G3DSA:3.30.70.1440 655 856 7.2E-268 T 13-10-2018 VEA_000226 d4ad106997084486054aaa247fb97447 1019 Gene3D G3DSA:1.20.1640.10 509 1008 7.2E-268 T 13-10-2018 VEA_000226 d4ad106997084486054aaa247fb97447 1019 SUPERFAMILY SSF82866 292 491 9.16E-38 T 13-10-2018 VEA_000226 d4ad106997084486054aaa247fb97447 1019 SUPERFAMILY SSF82714 712 788 1.28E-10 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_000226 d4ad106997084486054aaa247fb97447 1019 SUPERFAMILY SSF82866 794 1015 1.7E-43 T 13-10-2018 VEA_000226 d4ad106997084486054aaa247fb97447 1019 SUPERFAMILY SSF82693 136 325 1.41E-21 T 13-10-2018 VEA_000226 d4ad106997084486054aaa247fb97447 1019 Gene3D G3DSA:3.30.70.1320 135 328 7.2E-268 T 13-10-2018 VEA_000226 d4ad106997084486054aaa247fb97447 1019 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 1.6E-24 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_000226 d4ad106997084486054aaa247fb97447 1019 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 1.6E-24 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_000226 d4ad106997084486054aaa247fb97447 1019 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.6E-24 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_000226 d4ad106997084486054aaa247fb97447 1019 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.6E-24 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_000226 d4ad106997084486054aaa247fb97447 1019 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 1.6E-24 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_000226 d4ad106997084486054aaa247fb97447 1019 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 1.6E-24 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_000226 d4ad106997084486054aaa247fb97447 1019 Gene3D G3DSA:1.20.1640.10 10 508 7.2E-268 T 13-10-2018 VEA_000226 d4ad106997084486054aaa247fb97447 1019 Gene3D G3DSA:3.30.2090.10 179 270 7.2E-268 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_000226 d4ad106997084486054aaa247fb97447 1019 Gene3D G3DSA:3.30.70.1430 40 804 7.2E-268 T 13-10-2018 VEA_003850 b035fd8a22fd7c26242f544378c17a1e 317 Gene3D G3DSA:1.10.8.60 193 256 5.4E-21 T 13-10-2018 VEA_003850 b035fd8a22fd7c26242f544378c17a1e 317 SUPERFAMILY SSF52540 22 260 2.57E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003850 b035fd8a22fd7c26242f544378c17a1e 317 Pfam PF02954 Bacterial regulatory protein, Fis family 273 313 4.3E-12 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEA_003850 b035fd8a22fd7c26242f544378c17a1e 317 SUPERFAMILY SSF46689 232 316 2.56E-15 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_003850 b035fd8a22fd7c26242f544378c17a1e 317 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 108 123 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VEA_003850 b035fd8a22fd7c26242f544378c17a1e 317 Pfam PF00158 Sigma-54 interaction domain 22 188 1.7E-65 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VEA_003850 b035fd8a22fd7c26242f544378c17a1e 317 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 296 316 9.1E-10 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEA_003850 b035fd8a22fd7c26242f544378c17a1e 317 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 279 296 9.1E-10 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEA_003850 b035fd8a22fd7c26242f544378c17a1e 317 Gene3D G3DSA:3.40.50.300 10 192 1.4E-60 T 13-10-2018 VEA_003850 b035fd8a22fd7c26242f544378c17a1e 317 SMART SM00382 42 186 8.4E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_003850 b035fd8a22fd7c26242f544378c17a1e 317 Gene3D G3DSA:1.10.10.60 265 317 1.6E-14 T 13-10-2018 VEA_003850 b035fd8a22fd7c26242f544378c17a1e 317 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 232 241 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VEA_000645 8197686462b0bdf719e904559ba06fcc 418 Pfam PF00709 Adenylosuccinate synthetase 4 416 5.7E-130 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VEA_000645 8197686462b0bdf719e904559ba06fcc 418 Gene3D G3DSA:3.40.440.10 6 255 1.9E-72 T 13-10-2018 VEA_000645 8197686462b0bdf719e904559ba06fcc 418 Gene3D G3DSA:3.90.170.10 266 418 7.9E-50 T 13-10-2018 VEA_000645 8197686462b0bdf719e904559ba06fcc 418 SUPERFAMILY SSF52540 1 417 1.49E-121 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000645 8197686462b0bdf719e904559ba06fcc 418 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 418 141.578 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VEA_000645 8197686462b0bdf719e904559ba06fcc 418 Gene3D G3DSA:1.10.300.10 99 200 1.9E-72 T 13-10-2018 VEA_000645 8197686462b0bdf719e904559ba06fcc 418 SMART SM00788 3 417 3.6E-173 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VEA_001209 f537b29981f528c7ef0419c25a33c8d0 469 SUPERFAMILY SSF53383 63 463 1.9E-65 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_001209 f537b29981f528c7ef0419c25a33c8d0 469 Pfam PF00266 Aminotransferase class-V 84 413 4.1E-33 T 13-10-2018 IPR000192 Aminotransferase class V domain VEA_001209 f537b29981f528c7ef0419c25a33c8d0 469 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 269 288 - T 13-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VEA_001209 f537b29981f528c7ef0419c25a33c8d0 469 Gene3D G3DSA:3.40.640.10 85 355 4.6E-69 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_001209 f537b29981f528c7ef0419c25a33c8d0 469 Gene3D G3DSA:3.90.1150.10 72 457 4.6E-69 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEA_001209 f537b29981f528c7ef0419c25a33c8d0 469 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 12 39 4.8E-4 T 13-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VEA_002054 489593f1d820d993e27ace68fc8c90d2 458 SUPERFAMILY SSF116726 367 437 2.88E-7 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VEA_002054 489593f1d820d993e27ace68fc8c90d2 458 Gene3D G3DSA:3.30.70.1450 367 458 1.9E-28 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VEA_002054 489593f1d820d993e27ace68fc8c90d2 458 Pfam PF02080 TrkA-C domain 390 451 1.5E-9 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VEA_002054 489593f1d820d993e27ace68fc8c90d2 458 Pfam PF02080 TrkA-C domain 156 225 4.2E-11 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VEA_002054 489593f1d820d993e27ace68fc8c90d2 458 SUPERFAMILY SSF116726 136 223 2.62E-9 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VEA_002054 489593f1d820d993e27ace68fc8c90d2 458 Pfam PF02254 TrkA-N domain 3 123 2.7E-29 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VEA_002054 489593f1d820d993e27ace68fc8c90d2 458 Pfam PF02254 TrkA-N domain 235 350 1.3E-25 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VEA_002054 489593f1d820d993e27ace68fc8c90d2 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 4.9E-34 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VEA_002054 489593f1d820d993e27ace68fc8c90d2 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 4.9E-34 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VEA_002054 489593f1d820d993e27ace68fc8c90d2 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 4.9E-34 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VEA_002054 489593f1d820d993e27ace68fc8c90d2 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 4.9E-34 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VEA_002054 489593f1d820d993e27ace68fc8c90d2 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 4.9E-34 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VEA_002054 489593f1d820d993e27ace68fc8c90d2 458 SUPERFAMILY SSF51735 232 376 2.13E-33 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_002054 489593f1d820d993e27ace68fc8c90d2 458 Gene3D G3DSA:3.40.50.720 2 139 1.1E-51 T 13-10-2018 VEA_002054 489593f1d820d993e27ace68fc8c90d2 458 Gene3D G3DSA:3.40.50.720 233 366 1.4E-38 T 13-10-2018 VEA_002054 489593f1d820d993e27ace68fc8c90d2 458 SUPERFAMILY SSF51735 1 151 2.98E-36 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_002054 489593f1d820d993e27ace68fc8c90d2 458 Gene3D G3DSA:3.30.70.1450 140 232 1.5E-21 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VEA_001708 913b74b81adef43b153b091e5781b6fe 295 Gene3D G3DSA:3.40.1010.10 40 156 1.0E-44 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 VEA_001708 913b74b81adef43b153b091e5781b6fe 295 SUPERFAMILY SSF53790 37 284 9.03E-80 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 VEA_001708 913b74b81adef43b153b091e5781b6fe 295 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 43 252 6.6E-46 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 VEA_001708 913b74b81adef43b153b091e5781b6fe 295 Gene3D G3DSA:3.30.950.10 157 294 1.6E-45 T 13-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 VEA_001708 913b74b81adef43b153b091e5781b6fe 295 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 121 154 - T 13-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VEA_001708 913b74b81adef43b153b091e5781b6fe 295 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 41 274 7.6E-94 T 13-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VEA_001708 913b74b81adef43b153b091e5781b6fe 295 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 46 60 - T 13-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VEA_004057 daab3f862333bc024de26d3ecd63624d 434 Pfam PF03471 Transporter associated domain 343 422 2.0E-18 T 13-10-2018 IPR005170 Transporter-associated domain VEA_004057 daab3f862333bc024de26d3ecd63624d 434 SUPERFAMILY SSF56176 343 422 1.28E-19 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VEA_004057 daab3f862333bc024de26d3ecd63624d 434 Gene3D G3DSA:3.30.465.10 337 423 2.2E-25 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 VEA_004057 daab3f862333bc024de26d3ecd63624d 434 SUPERFAMILY SSF54631 198 331 2.07E-22 T 13-10-2018 VEA_004057 daab3f862333bc024de26d3ecd63624d 434 SMART SM01091 342 424 1.1E-22 T 13-10-2018 IPR005170 Transporter-associated domain VEA_004057 daab3f862333bc024de26d3ecd63624d 434 Pfam PF01595 Domain of unknown function DUF21 5 195 4.9E-42 T 13-10-2018 IPR002550 CNNM, transmembrane domain VEA_004057 daab3f862333bc024de26d3ecd63624d 434 Gene3D G3DSA:3.10.580.10 191 336 1.9E-37 T 13-10-2018 VEA_001793 1630edf03f3711954b2419ff240e6398 329 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 13 312 5.4E-110 T 13-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 VEA_001793 1630edf03f3711954b2419ff240e6398 329 PIRSF PIRSF026649 12 313 2.1E-82 T 13-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VEA_001793 1630edf03f3711954b2419ff240e6398 329 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 15 304 2.6E-77 T 13-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VEA_001793 1630edf03f3711954b2419ff240e6398 329 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 7 311 49.397 T 13-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 VEA_003021 45abfc487e87b19bbb988576a7241553 93 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 93 30.557 T 13-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 VEA_003021 45abfc487e87b19bbb988576a7241553 93 SUPERFAMILY SSF47729 1 91 2.5E-30 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VEA_003021 45abfc487e87b19bbb988576a7241553 93 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 13-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VEA_003021 45abfc487e87b19bbb988576a7241553 93 SMART SM00411 1 91 4.4E-43 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VEA_003021 45abfc487e87b19bbb988576a7241553 93 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 92 1.6E-49 T 13-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 VEA_003021 45abfc487e87b19bbb988576a7241553 93 Gene3D G3DSA:4.10.520.10 40 92 1.8E-29 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VEA_003021 45abfc487e87b19bbb988576a7241553 93 Gene3D G3DSA:4.10.520.10 2 39 5.4E-12 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VEA_003021 45abfc487e87b19bbb988576a7241553 93 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.2E-18 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VEA_003021 45abfc487e87b19bbb988576a7241553 93 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.2E-18 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VEA_003021 45abfc487e87b19bbb988576a7241553 93 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.2E-18 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VEA_003021 45abfc487e87b19bbb988576a7241553 93 Pfam PF00216 Bacterial DNA-binding protein 1 91 5.9E-31 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VEA_000948 9083b141497be88e4dbac5933a22ace9 341 Pfam PF01757 Acyltransferase family 8 326 4.1E-25 T 13-10-2018 IPR002656 Acyltransferase 3 GO:0016747 VEA_001028 c51c301e04b63e561920de3de504b2db 333 Pfam PF02274 Amidinotransferase 31 326 9.2E-63 T 13-10-2018 VEA_001028 c51c301e04b63e561920de3de504b2db 333 PIRSF PIRSF028188 7 329 9.2E-156 T 13-10-2018 IPR014541 Predicted amidinotransferase, FN0238 type VEA_001028 c51c301e04b63e561920de3de504b2db 333 SUPERFAMILY SSF55909 27 321 7.85E-39 T 13-10-2018 VEA_001028 c51c301e04b63e561920de3de504b2db 333 Gene3D G3DSA:3.75.10.10 26 321 4.4E-44 T 13-10-2018 VEA_001530 ddabead03cdd4cd0a950bc70462873bf 389 Pfam PF00005 ABC transporter 22 167 2.4E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_001530 ddabead03cdd4cd0a950bc70462873bf 389 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_001530 ddabead03cdd4cd0a950bc70462873bf 389 Gene3D G3DSA:3.90.1280.20 307 369 2.0E-5 T 13-10-2018 VEA_001530 ddabead03cdd4cd0a950bc70462873bf 389 SMART SM00382 30 217 2.5E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_001530 ddabead03cdd4cd0a950bc70462873bf 389 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 18 363 1.1E-99 T 13-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 VEA_001530 ddabead03cdd4cd0a950bc70462873bf 389 SUPERFAMILY SSF52540 1 242 8.2E-74 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001530 ddabead03cdd4cd0a950bc70462873bf 389 SUPERFAMILY SSF54631 253 367 8.29E-16 T 13-10-2018 VEA_001530 ddabead03cdd4cd0a950bc70462873bf 389 Pfam PF00571 CBS domain 255 301 1.8E-4 T 13-10-2018 IPR000644 CBS domain VEA_001530 ddabead03cdd4cd0a950bc70462873bf 389 Pfam PF00571 CBS domain 322 366 0.0034 T 13-10-2018 IPR000644 CBS domain VEA_001530 ddabead03cdd4cd0a950bc70462873bf 389 Gene3D G3DSA:3.40.50.300 1 273 2.0E-73 T 13-10-2018 VEA_003699 0af76ece30289c62f0d013fb241f9f36 295 Gene3D G3DSA:3.40.140.10 29 179 2.1E-44 T 13-10-2018 VEA_003699 0af76ece30289c62f0d013fb241f9f36 295 SUPERFAMILY SSF53927 1 147 4.85E-41 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VEA_003699 0af76ece30289c62f0d013fb241f9f36 295 Hamap MF_01558 Cytidine deaminase [cdd]. 1 293 49.81 T 13-10-2018 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VEA_003699 0af76ece30289c62f0d013fb241f9f36 295 SUPERFAMILY SSF53927 152 284 5.38E-37 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VEA_003699 0af76ece30289c62f0d013fb241f9f36 295 Gene3D G3DSA:3.40.140.10 180 295 2.2E-26 T 13-10-2018 VEA_003699 0af76ece30289c62f0d013fb241f9f36 295 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 13-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VEA_003699 0af76ece30289c62f0d013fb241f9f36 295 PIRSF PIRSF006334 14 295 4.7E-109 T 13-10-2018 VEA_003699 0af76ece30289c62f0d013fb241f9f36 295 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 29 293 1.4E-99 T 13-10-2018 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VEA_003699 0af76ece30289c62f0d013fb241f9f36 295 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 277 3.1E-41 T 13-10-2018 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VEA_003699 0af76ece30289c62f0d013fb241f9f36 295 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 60 140 5.3E-12 T 13-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain VEA_001740 b31e1053967a7de8f847d99ce8f56d74 100 Pfam PF00276 Ribosomal protein L23 9 95 1.7E-31 T 13-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 VEA_001740 b31e1053967a7de8f847d99ce8f56d74 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 13-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001740 b31e1053967a7de8f847d99ce8f56d74 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.535 T 13-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 VEA_001740 b31e1053967a7de8f847d99ce8f56d74 100 Gene3D G3DSA:3.30.70.330 1 100 5.0E-38 T 13-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VEA_001740 b31e1053967a7de8f847d99ce8f56d74 100 SUPERFAMILY SSF54189 6 97 2.88E-32 T 13-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_002594 997aa780ccd2a5e6bb476bfb2da3ed04 1034 Gene3D G3DSA:3.30.70.1320 135 325 1.6E-261 T 13-10-2018 VEA_002594 997aa780ccd2a5e6bb476bfb2da3ed04 1034 Gene3D G3DSA:3.30.70.1430 567 656 1.6E-261 T 13-10-2018 VEA_002594 997aa780ccd2a5e6bb476bfb2da3ed04 1034 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.9E-28 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_002594 997aa780ccd2a5e6bb476bfb2da3ed04 1034 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.9E-28 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_002594 997aa780ccd2a5e6bb476bfb2da3ed04 1034 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.9E-28 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_002594 997aa780ccd2a5e6bb476bfb2da3ed04 1034 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 1.9E-28 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_002594 997aa780ccd2a5e6bb476bfb2da3ed04 1034 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 1.9E-28 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_002594 997aa780ccd2a5e6bb476bfb2da3ed04 1034 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 1.9E-28 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_002594 997aa780ccd2a5e6bb476bfb2da3ed04 1034 SUPERFAMILY SSF82866 289 490 7.72E-42 T 13-10-2018 VEA_002594 997aa780ccd2a5e6bb476bfb2da3ed04 1034 SUPERFAMILY SSF82714 184 263 2.09E-11 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_002594 997aa780ccd2a5e6bb476bfb2da3ed04 1034 SUPERFAMILY SSF82866 793 1027 2.75E-48 T 13-10-2018 VEA_002594 997aa780ccd2a5e6bb476bfb2da3ed04 1034 Gene3D G3DSA:3.30.70.1440 657 857 1.6E-261 T 13-10-2018 VEA_002594 997aa780ccd2a5e6bb476bfb2da3ed04 1034 Gene3D G3DSA:3.30.2090.10 179 270 1.6E-261 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_002594 997aa780ccd2a5e6bb476bfb2da3ed04 1034 SUPERFAMILY SSF82693 41 133 2.88E-23 T 13-10-2018 VEA_002594 997aa780ccd2a5e6bb476bfb2da3ed04 1034 SUPERFAMILY SSF82714 711 793 7.06E-5 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_002594 997aa780ccd2a5e6bb476bfb2da3ed04 1034 Gene3D G3DSA:3.30.2090.10 710 798 1.6E-261 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VEA_002594 997aa780ccd2a5e6bb476bfb2da3ed04 1034 SUPERFAMILY SSF82693 142 325 2.88E-13 T 13-10-2018 VEA_002594 997aa780ccd2a5e6bb476bfb2da3ed04 1034 Gene3D G3DSA:1.20.1640.10 508 1023 1.6E-261 T 13-10-2018 VEA_002594 997aa780ccd2a5e6bb476bfb2da3ed04 1034 Gene3D G3DSA:3.30.70.1430 41 806 1.6E-261 T 13-10-2018 VEA_002594 997aa780ccd2a5e6bb476bfb2da3ed04 1034 Gene3D G3DSA:1.20.1640.10 14 507 1.6E-261 T 13-10-2018 VEA_002594 997aa780ccd2a5e6bb476bfb2da3ed04 1034 Pfam PF00873 AcrB/AcrD/AcrF family 11 1026 5.5E-176 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VEA_004336 49b2e0611f6806e330f7c00cfb5caf2f 256 SUPERFAMILY SSF101082 29 225 5.36E-34 T 13-10-2018 VEA_004336 49b2e0611f6806e330f7c00cfb5caf2f 256 TIGRFAM TIGR02780 TrbJ_Ti: P-type conjugative transfer protein TrbJ 10 251 5.1E-60 T 13-10-2018 IPR014147 Type IV conjugative transfer protein TrbJ VEA_003644 78cf2ef4c7a987fdc495c1989e945792 160 Gene3D G3DSA:1.10.10.10 1 157 9.2E-36 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_003644 78cf2ef4c7a987fdc495c1989e945792 160 Pfam PF01047 MarR family 50 110 1.6E-15 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEA_003644 78cf2ef4c7a987fdc495c1989e945792 160 SUPERFAMILY SSF46785 10 156 6.17E-34 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_003644 78cf2ef4c7a987fdc495c1989e945792 160 SMART SM00347 42 145 1.2E-25 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEA_003644 78cf2ef4c7a987fdc495c1989e945792 160 ProSitePatterns PS01117 MarR-type HTH domain signature. 84 118 - T 13-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site VEA_003644 78cf2ef4c7a987fdc495c1989e945792 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 135 155 7.2E-14 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEA_003644 78cf2ef4c7a987fdc495c1989e945792 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 85 7.2E-14 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEA_003644 78cf2ef4c7a987fdc495c1989e945792 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 101 7.2E-14 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEA_003644 78cf2ef4c7a987fdc495c1989e945792 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 105 121 7.2E-14 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEA_002207 e390ca930420d3bfbea01372d310095f 575 Gene3D G3DSA:1.20.1730.10 347 556 3.2E-26 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily VEA_002207 e390ca930420d3bfbea01372d310095f 575 Gene3D G3DSA:1.20.1730.10 21 329 8.4E-36 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily VEA_002207 e390ca930420d3bfbea01372d310095f 575 Pfam PF00474 Sodium:solute symporter family 376 491 7.1E-15 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VEA_002207 e390ca930420d3bfbea01372d310095f 575 Pfam PF00474 Sodium:solute symporter family 33 296 1.1E-35 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VEA_002207 e390ca930420d3bfbea01372d310095f 575 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 7 566 4.3E-258 T 13-10-2018 IPR019899 Sodium/solute symporter, VC2705 subfamily VEA_003444 e09f4466c69425838ab202a287a975b3 546 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 397 416 1.3E-10 T 13-10-2018 VEA_003444 e09f4466c69425838ab202a287a975b3 546 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 457 475 1.3E-10 T 13-10-2018 VEA_003444 e09f4466c69425838ab202a287a975b3 546 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 427 446 1.3E-10 T 13-10-2018 VEA_003444 e09f4466c69425838ab202a287a975b3 546 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 314 330 1.3E-10 T 13-10-2018 VEA_003444 e09f4466c69425838ab202a287a975b3 546 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 400 505 2.3E-10 T 13-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 VEA_003444 e09f4466c69425838ab202a287a975b3 546 SUPERFAMILY SSF54211 314 506 4.93E-34 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEA_003444 e09f4466c69425838ab202a287a975b3 546 Pfam PF13654 AAA domain 107 288 3.9E-23 T 13-10-2018 VEA_003444 e09f4466c69425838ab202a287a975b3 546 Gene3D G3DSA:3.30.230.10 291 532 2.6E-92 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VEA_003444 e09f4466c69425838ab202a287a975b3 546 Gene3D G3DSA:3.40.50.300 21 203 2.3E-12 T 13-10-2018 VEA_000653 66678c60d900515b16a2560b300702cb 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.6E-18 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000653 66678c60d900515b16a2560b300702cb 293 Gene3D G3DSA:1.10.10.10 1 88 2.8E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000653 66678c60d900515b16a2560b300702cb 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.5E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000653 66678c60d900515b16a2560b300702cb 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.5E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000653 66678c60d900515b16a2560b300702cb 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.5E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000653 66678c60d900515b16a2560b300702cb 293 Pfam PF03466 LysR substrate binding domain 88 285 2.8E-32 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_000653 66678c60d900515b16a2560b300702cb 293 Gene3D G3DSA:3.40.190.10 162 261 3.5E-47 T 13-10-2018 VEA_000653 66678c60d900515b16a2560b300702cb 293 Gene3D G3DSA:3.40.190.10 105 285 3.5E-47 T 13-10-2018 VEA_000653 66678c60d900515b16a2560b300702cb 293 SUPERFAMILY SSF53850 89 291 4.89E-36 T 13-10-2018 VEA_000653 66678c60d900515b16a2560b300702cb 293 SUPERFAMILY SSF46785 2 84 7.71E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_001911 13baccbfc0d11a713a037227b6d7fc07 463 SMART SM00729 58 278 2.1E-53 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VEA_001911 13baccbfc0d11a713a037227b6d7fc07 463 Gene3D G3DSA:1.10.10.920 370 463 3.6E-34 T 13-10-2018 VEA_001911 13baccbfc0d11a713a037227b6d7fc07 463 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 14 463 2.2E-205 T 13-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 VEA_001911 13baccbfc0d11a713a037227b6d7fc07 463 Pfam PF04055 Radical SAM superfamily 63 233 9.3E-18 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VEA_001911 13baccbfc0d11a713a037227b6d7fc07 463 SUPERFAMILY SSF102114 12 450 5.89E-144 T 13-10-2018 VEA_001911 13baccbfc0d11a713a037227b6d7fc07 463 Pfam PF06969 HemN C-terminal domain 369 437 1.2E-11 T 13-10-2018 IPR010723 HemN, C-terminal VEA_001911 13baccbfc0d11a713a037227b6d7fc07 463 PIRSF PIRSF000167 9 460 5.7E-173 T 13-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 VEA_001911 13baccbfc0d11a713a037227b6d7fc07 463 Gene3D G3DSA:3.80.30.20 7 369 1.3E-136 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VEA_003308 47ba83e93692aa4b571c1c7af2a12329 154 PIRSF PIRSF012335 1 154 1.5E-65 T 13-10-2018 IPR016596 Protein of unknown function UCP012335 VEA_003308 47ba83e93692aa4b571c1c7af2a12329 154 Pfam PF11008 Protein of unknown function (DUF2846) 15 126 4.1E-30 T 13-10-2018 IPR022548 Domain of unknown function DUF2846 VEA_004102 a14c1de063daa7487be3556e03c7f0f7 76 Pfam PF09012 FeoC like transcriptional regulator 2 54 2.1E-13 T 13-10-2018 IPR015102 Transcriptional regulator HTH-type, FeoC VEA_004102 a14c1de063daa7487be3556e03c7f0f7 76 Gene3D G3DSA:1.10.10.10 1 69 1.5E-5 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_004102 a14c1de063daa7487be3556e03c7f0f7 76 SUPERFAMILY SSF46785 1 54 3.48E-13 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_002529 5c17812b5c34947fb329e06629eb52b4 947 Pfam PF05193 Peptidase M16 inactive domain 682 853 4.7E-22 T 13-10-2018 IPR007863 Peptidase M16, C-terminal VEA_002529 5c17812b5c34947fb329e06629eb52b4 947 Pfam PF05193 Peptidase M16 inactive domain 215 390 3.2E-31 T 13-10-2018 IPR007863 Peptidase M16, C-terminal VEA_002529 5c17812b5c34947fb329e06629eb52b4 947 Gene3D G3DSA:3.30.830.10 270 467 1.4E-34 T 13-10-2018 VEA_002529 5c17812b5c34947fb329e06629eb52b4 947 Gene3D G3DSA:3.30.830.10 521 726 5.2E-42 T 13-10-2018 VEA_002529 5c17812b5c34947fb329e06629eb52b4 947 SUPERFAMILY SSF63411 736 936 1.18E-40 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VEA_002529 5c17812b5c34947fb329e06629eb52b4 947 Pfam PF00675 Insulinase (Peptidase family M16) 62 150 2.8E-17 T 13-10-2018 IPR011765 Peptidase M16, N-terminal VEA_002529 5c17812b5c34947fb329e06629eb52b4 947 Pfam PF00675 Insulinase (Peptidase family M16) 536 641 5.7E-11 T 13-10-2018 IPR011765 Peptidase M16, N-terminal VEA_002529 5c17812b5c34947fb329e06629eb52b4 947 SUPERFAMILY SSF63411 274 464 7.63E-33 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VEA_002529 5c17812b5c34947fb329e06629eb52b4 947 SUPERFAMILY SSF63411 45 254 9.67E-56 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VEA_002529 5c17812b5c34947fb329e06629eb52b4 947 Gene3D G3DSA:3.30.830.10 738 930 6.7E-38 T 13-10-2018 VEA_002529 5c17812b5c34947fb329e06629eb52b4 947 SUPERFAMILY SSF63411 505 717 2.07E-44 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VEA_002529 5c17812b5c34947fb329e06629eb52b4 947 Gene3D G3DSA:3.30.830.10 43 267 3.1E-66 T 13-10-2018 VEA_000085 59df96b81420629b823483d577859100 441 Pfam PF07394 Protein of unknown function (DUF1501) 36 421 3.5E-61 T 13-10-2018 IPR010869 Protein of unknown function DUF1501 VEA_000596 9cf7765a0df00bab6beac822a50ec69a 285 SUPERFAMILY SSF52833 38 130 9.26E-16 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VEA_000596 9cf7765a0df00bab6beac822a50ec69a 285 Pfam PF13410 Glutathione S-transferase, C-terminal domain 176 244 1.0E-9 T 13-10-2018 VEA_000596 9cf7765a0df00bab6beac822a50ec69a 285 Gene3D G3DSA:3.40.30.10 17 254 2.4E-111 T 13-10-2018 VEA_000596 9cf7765a0df00bab6beac822a50ec69a 285 Gene3D G3DSA:1.20.1050.10 132 248 2.4E-111 T 13-10-2018 VEA_000596 9cf7765a0df00bab6beac822a50ec69a 285 Pfam PF02798 Glutathione S-transferase, N-terminal domain 64 126 2.1E-6 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VEA_000596 9cf7765a0df00bab6beac822a50ec69a 285 SUPERFAMILY SSF47616 132 277 2.27E-31 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VEA_003730 0452e83c071d4983f82a78fbc01971b2 324 Gene3D G3DSA:1.10.287.110 255 324 1.3E-12 T 13-10-2018 IPR036869 Chaperone J-domain superfamily VEA_003730 0452e83c071d4983f82a78fbc01971b2 324 SUPERFAMILY SSF46565 268 321 3.66E-13 T 13-10-2018 IPR036869 Chaperone J-domain superfamily VEA_003730 0452e83c071d4983f82a78fbc01971b2 324 SUPERFAMILY SSF81901 33 143 1.57E-8 T 13-10-2018 VEA_003730 0452e83c071d4983f82a78fbc01971b2 324 Gene3D G3DSA:1.25.40.10 6 188 4.9E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_004372 4ac1623e8e5b0b7c5ec37084b4e9c864 542 SUPERFAMILY SSF51645 20 541 1.26E-187 T 13-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VEA_004372 4ac1623e8e5b0b7c5ec37084b4e9c864 542 ProSitePatterns PS00510 Malate synthase signature. 275 290 - T 13-10-2018 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VEA_004372 4ac1623e8e5b0b7c5ec37084b4e9c864 542 Gene3D G3DSA:3.20.20.360 10 420 1.3E-189 T 13-10-2018 VEA_004372 4ac1623e8e5b0b7c5ec37084b4e9c864 542 PIRSF PIRSF001363 9 542 6.0E-250 T 13-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VEA_004372 4ac1623e8e5b0b7c5ec37084b4e9c864 542 Gene3D G3DSA:1.20.1220.12 421 542 4.2E-48 T 13-10-2018 VEA_004372 4ac1623e8e5b0b7c5ec37084b4e9c864 542 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 32 541 3.9E-262 T 13-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VEA_004372 4ac1623e8e5b0b7c5ec37084b4e9c864 542 Pfam PF01274 Malate synthase 23 541 1.8E-200 T 13-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VEA_003669 28cab6b4e3d9854a9fc6d02405c84e75 304 PIRSF PIRSF001365 1 301 2.4E-85 T 13-10-2018 IPR002220 DapA-like GO:0016829 VEA_003669 28cab6b4e3d9854a9fc6d02405c84e75 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 2.3E-10 T 13-10-2018 IPR002220 DapA-like GO:0016829 VEA_003669 28cab6b4e3d9854a9fc6d02405c84e75 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 2.3E-10 T 13-10-2018 IPR002220 DapA-like GO:0016829 VEA_003669 28cab6b4e3d9854a9fc6d02405c84e75 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 132 149 2.3E-10 T 13-10-2018 IPR002220 DapA-like GO:0016829 VEA_003669 28cab6b4e3d9854a9fc6d02405c84e75 304 Gene3D G3DSA:3.20.20.70 1 298 5.7E-87 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_003669 28cab6b4e3d9854a9fc6d02405c84e75 304 Pfam PF00701 Dihydrodipicolinate synthetase family 6 291 8.6E-61 T 13-10-2018 IPR002220 DapA-like GO:0016829 VEA_003669 28cab6b4e3d9854a9fc6d02405c84e75 304 SMART SM01130 4 293 6.3E-96 T 13-10-2018 IPR002220 DapA-like GO:0016829 VEA_003669 28cab6b4e3d9854a9fc6d02405c84e75 304 SUPERFAMILY SSF51569 3 291 2.51E-85 T 13-10-2018 VEA_000011 b6e2e7380a933ae319b839668f4c5060 716 SMART SM00220 93 481 6.1E-35 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VEA_000011 b6e2e7380a933ae319b839668f4c5060 716 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 220 232 - T 13-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 VEA_000011 b6e2e7380a933ae319b839668f4c5060 716 Pfam PF00069 Protein kinase domain 93 323 2.8E-39 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VEA_000011 b6e2e7380a933ae319b839668f4c5060 716 SUPERFAMILY SSF56112 90 327 2.56E-56 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily VEA_000011 b6e2e7380a933ae319b839668f4c5060 716 Gene3D G3DSA:1.10.510.10 180 342 1.3E-33 T 13-10-2018 VEA_000011 b6e2e7380a933ae319b839668f4c5060 716 Gene3D G3DSA:3.30.200.20 81 178 8.5E-26 T 13-10-2018 VEA_000889 3c2565a352585c341c33179c65957b22 236 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 189 5.1E-20 T 13-10-2018 VEA_000889 3c2565a352585c341c33179c65957b22 236 Gene3D G3DSA:1.10.150.240 18 93 7.5E-19 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VEA_000889 3c2565a352585c341c33179c65957b22 236 SUPERFAMILY SSF56784 3 233 4.96E-24 T 13-10-2018 IPR036412 HAD-like superfamily VEA_000889 3c2565a352585c341c33179c65957b22 236 Gene3D G3DSA:3.40.50.1000 6 189 7.5E-19 T 13-10-2018 IPR023214 HAD superfamily VEA_001310 a5f8fcebc72f204b1b82a9f60595dc20 292 SUPERFAMILY SSF48179 167 290 4.65E-39 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VEA_001310 a5f8fcebc72f204b1b82a9f60595dc20 292 Gene3D G3DSA:3.40.50.720 1 166 1.6E-51 T 13-10-2018 VEA_001310 a5f8fcebc72f204b1b82a9f60595dc20 292 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 168 287 4.9E-32 T 13-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 VEA_001310 a5f8fcebc72f204b1b82a9f60595dc20 292 PIRSF PIRSF000103 1 292 2.9E-78 T 13-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 VEA_001310 a5f8fcebc72f204b1b82a9f60595dc20 292 Gene3D G3DSA:1.10.1040.10 167 292 4.5E-38 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VEA_001310 a5f8fcebc72f204b1b82a9f60595dc20 292 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 6 163 6.1E-49 T 13-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 VEA_001310 a5f8fcebc72f204b1b82a9f60595dc20 292 SUPERFAMILY SSF51735 4 166 3.18E-53 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_000874 09166b1b93272ba89e5f4aa8d3907a96 243 Gene3D G3DSA:3.40.50.720 1 243 5.9E-81 T 13-10-2018 VEA_000874 09166b1b93272ba89e5f4aa8d3907a96 243 SUPERFAMILY SSF51735 2 242 4.51E-80 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_000874 09166b1b93272ba89e5f4aa8d3907a96 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.8E-37 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000874 09166b1b93272ba89e5f4aa8d3907a96 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.8E-37 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000874 09166b1b93272ba89e5f4aa8d3907a96 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.8E-37 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000874 09166b1b93272ba89e5f4aa8d3907a96 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.8E-37 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000874 09166b1b93272ba89e5f4aa8d3907a96 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.8E-37 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000874 09166b1b93272ba89e5f4aa8d3907a96 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 1.8E-37 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000874 09166b1b93272ba89e5f4aa8d3907a96 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 242 2.2E-62 T 13-10-2018 VEA_000874 09166b1b93272ba89e5f4aa8d3907a96 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 1.4E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000874 09166b1b93272ba89e5f4aa8d3907a96 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.4E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000874 09166b1b93272ba89e5f4aa8d3907a96 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.4E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_001553 12194f1c60ed1ca349ba387fdb662161 256 PIRSF PIRSF000292 1 255 1.7E-115 T 13-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 VEA_001553 12194f1c60ed1ca349ba387fdb662161 256 SUPERFAMILY SSF49503 82 243 9.49E-50 T 13-10-2018 IPR008972 Cupredoxin VEA_001553 12194f1c60ed1ca349ba387fdb662161 256 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 2 202 9.7E-103 T 13-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 VEA_001553 12194f1c60ed1ca349ba387fdb662161 256 Gene3D G3DSA:2.60.40.420 76 244 2.0E-54 T 13-10-2018 IPR008972 Cupredoxin VEA_001553 12194f1c60ed1ca349ba387fdb662161 256 SUPERFAMILY SSF81464 3 79 3.27E-20 T 13-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001553 12194f1c60ed1ca349ba387fdb662161 256 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 111 184 5.4E-8 T 13-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001553 12194f1c60ed1ca349ba387fdb662161 256 Gene3D G3DSA:1.10.287.90 1 75 9.8E-29 T 13-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001553 12194f1c60ed1ca349ba387fdb662161 256 Pfam PF06481 COX Aromatic Rich Motif 202 246 4.5E-13 T 13-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 VEA_000078 825d73bd5a94f751475809fd7512aee1 723 Gene3D G3DSA:2.170.130.10 45 163 3.2E-22 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VEA_000078 825d73bd5a94f751475809fd7512aee1 723 SUPERFAMILY SSF56935 38 722 5.49E-91 T 13-10-2018 VEA_000078 825d73bd5a94f751475809fd7512aee1 723 Pfam PF00593 TonB dependent receptor 246 721 4.1E-32 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VEA_000078 825d73bd5a94f751475809fd7512aee1 723 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 154 1.1E-17 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain VEA_000078 825d73bd5a94f751475809fd7512aee1 723 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 53 722 1.8E-83 T 13-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 VEA_000078 825d73bd5a94f751475809fd7512aee1 723 Gene3D G3DSA:2.40.170.20 168 723 6.5E-48 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VEA_003981 93347c712c5bad7ec26ecc0c9d9e50ff 644 PIRSF PIRSF000549 1 644 3.4E-290 T 13-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 VEA_003981 93347c712c5bad7ec26ecc0c9d9e50ff 644 Pfam PF08298 PrkA AAA domain 19 380 3.1E-177 T 13-10-2018 IPR013153 PrkA AAA domain VEA_003981 93347c712c5bad7ec26ecc0c9d9e50ff 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 9.5E-73 T 13-10-2018 IPR010650 PrkA C-terminal domain VEA_003981 93347c712c5bad7ec26ecc0c9d9e50ff 644 SUPERFAMILY SSF52540 73 368 6.47E-18 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003981 93347c712c5bad7ec26ecc0c9d9e50ff 644 SMART SM00763 19 380 2.0E-221 T 13-10-2018 IPR013153 PrkA AAA domain VEA_002155 014bd7bc363267e5c9ea72cf1ed9b7a3 369 Gene3D G3DSA:3.40.1350.30 45 189 1.7E-140 T 13-10-2018 VEA_002155 014bd7bc363267e5c9ea72cf1ed9b7a3 369 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 11 368 1.1E-187 T 13-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 VEA_002155 014bd7bc363267e5c9ea72cf1ed9b7a3 369 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 368 45.015 T 13-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 VEA_002155 014bd7bc363267e5c9ea72cf1ed9b7a3 369 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 301 330 - T 13-10-2018 IPR030390 RNA methyltransferase TrmA, active site VEA_002155 014bd7bc363267e5c9ea72cf1ed9b7a3 369 Gene3D G3DSA:3.40.50.150 13 364 1.7E-140 T 13-10-2018 VEA_002155 014bd7bc363267e5c9ea72cf1ed9b7a3 369 SUPERFAMILY SSF53335 10 367 9.18E-56 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_002155 014bd7bc363267e5c9ea72cf1ed9b7a3 369 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 350 360 - T 13-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site VEA_002155 014bd7bc363267e5c9ea72cf1ed9b7a3 369 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 10 368 2.0E-191 T 13-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 VEA_004340 746456b0494369005bfd82834f340dd2 517 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 197 1.8E-83 T 13-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 VEA_004340 746456b0494369005bfd82834f340dd2 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 3.8E-7 T 13-10-2018 VEA_004340 746456b0494369005bfd82834f340dd2 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 3.8E-7 T 13-10-2018 VEA_004340 746456b0494369005bfd82834f340dd2 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 3.8E-7 T 13-10-2018 VEA_004340 746456b0494369005bfd82834f340dd2 517 PRINTS PR00097 Anthranilate synthase component II signature 54 63 4.5E-6 T 13-10-2018 VEA_004340 746456b0494369005bfd82834f340dd2 517 PRINTS PR00097 Anthranilate synthase component II signature 169 182 4.5E-6 T 13-10-2018 VEA_004340 746456b0494369005bfd82834f340dd2 517 PRINTS PR00097 Anthranilate synthase component II signature 81 92 4.5E-6 T 13-10-2018 VEA_004340 746456b0494369005bfd82834f340dd2 517 Pfam PF00117 Glutamine amidotransferase class-I 12 191 3.8E-43 T 13-10-2018 IPR017926 Glutamine amidotransferase VEA_004340 746456b0494369005bfd82834f340dd2 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 5.4E-6 T 13-10-2018 VEA_004340 746456b0494369005bfd82834f340dd2 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 5.4E-6 T 13-10-2018 VEA_004340 746456b0494369005bfd82834f340dd2 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 5.4E-6 T 13-10-2018 VEA_004340 746456b0494369005bfd82834f340dd2 517 Gene3D G3DSA:3.40.50.880 6 201 2.9E-54 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VEA_004340 746456b0494369005bfd82834f340dd2 517 Pfam PF00958 GMP synthase C terminal domain 425 516 1.5E-43 T 13-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 VEA_004340 746456b0494369005bfd82834f340dd2 517 SUPERFAMILY SSF54810 397 517 5.75E-51 T 13-10-2018 VEA_004340 746456b0494369005bfd82834f340dd2 517 SUPERFAMILY SSF52402 189 412 3.53E-58 T 13-10-2018 VEA_004340 746456b0494369005bfd82834f340dd2 517 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 205 517 5.2E-156 T 13-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 VEA_004340 746456b0494369005bfd82834f340dd2 517 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 517 56.353 T 13-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 VEA_004340 746456b0494369005bfd82834f340dd2 517 Pfam PF02540 NAD synthase 212 285 1.1E-7 T 13-10-2018 IPR022310 NAD/GMP synthase VEA_004340 746456b0494369005bfd82834f340dd2 517 SUPERFAMILY SSF52317 5 196 3.32E-57 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VEA_004340 746456b0494369005bfd82834f340dd2 517 Gene3D G3DSA:3.40.50.620 202 397 8.2E-75 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_004340 746456b0494369005bfd82834f340dd2 517 Gene3D G3DSA:3.30.300.10 398 517 1.1E-50 T 13-10-2018 VEA_003133 32c5b9614c4a61aff7ae2545cd994278 179 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 30 161 1.5E-27 T 13-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VEA_001242 5f08c343745e12190e7ee3a4abd9d4da 579 Gene3D G3DSA:3.40.50.300 296 576 7.1E-65 T 13-10-2018 VEA_001242 5f08c343745e12190e7ee3a4abd9d4da 579 SUPERFAMILY SSF52540 288 528 2.28E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001242 5f08c343745e12190e7ee3a4abd9d4da 579 Pfam PF12558 ATP-binding cassette cobalt transporter 235 306 4.8E-20 T 13-10-2018 IPR022216 Putative ABC cobalt transporter VEA_001242 5f08c343745e12190e7ee3a4abd9d4da 579 SUPERFAMILY SSF52540 2 235 6.69E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001242 5f08c343745e12190e7ee3a4abd9d4da 579 Pfam PF00005 ABC transporter 20 170 6.5E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_001242 5f08c343745e12190e7ee3a4abd9d4da 579 Pfam PF00005 ABC transporter 315 461 2.4E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_001242 5f08c343745e12190e7ee3a4abd9d4da 579 Gene3D G3DSA:3.40.50.300 1 253 1.8E-68 T 13-10-2018 VEA_001242 5f08c343745e12190e7ee3a4abd9d4da 579 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_001242 5f08c343745e12190e7ee3a4abd9d4da 579 ProSitePatterns PS00211 ABC transporters family signature. 433 447 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_001242 5f08c343745e12190e7ee3a4abd9d4da 579 SMART SM00382 324 510 1.0E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_001242 5f08c343745e12190e7ee3a4abd9d4da 579 SMART SM00382 29 221 1.6E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_002898 5f9e9984ba83200dbbde47846bdaa0a7 532 Gene3D G3DSA:3.30.70.100 427 519 2.3E-26 T 13-10-2018 VEA_002898 5f9e9984ba83200dbbde47846bdaa0a7 532 SUPERFAMILY SSF50182 360 426 2.09E-18 T 13-10-2018 IPR010920 LSM domain superfamily VEA_002898 5f9e9984ba83200dbbde47846bdaa0a7 532 Gene3D G3DSA:2.30.30.60 376 424 2.5E-18 T 13-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily VEA_002898 5f9e9984ba83200dbbde47846bdaa0a7 532 SUPERFAMILY SSF82861 273 359 1.14E-13 T 13-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 VEA_002898 5f9e9984ba83200dbbde47846bdaa0a7 532 Pfam PF00924 Mechanosensitive ion channel 324 515 4.5E-54 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VEA_002898 5f9e9984ba83200dbbde47846bdaa0a7 532 SUPERFAMILY SSF82689 429 525 7.59E-32 T 13-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 VEA_001722 aa65d80d87c097c53da0a66a6015af98 444 Hamap MF_01465 Protein translocase subunit SecY [secY]. 9 434 29.181 T 13-10-2018 IPR026593 Protein translocase subunit SecY VEA_001722 aa65d80d87c097c53da0a66a6015af98 444 SUPERFAMILY SSF103491 15 425 1.44E-130 T 13-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VEA_001722 aa65d80d87c097c53da0a66a6015af98 444 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 13-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VEA_001722 aa65d80d87c097c53da0a66a6015af98 444 ProSitePatterns PS00756 Protein secY signature 2. 171 188 - T 13-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VEA_001722 aa65d80d87c097c53da0a66a6015af98 444 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 430 5.1E-134 T 13-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VEA_001722 aa65d80d87c097c53da0a66a6015af98 444 Gene3D G3DSA:1.10.3370.10 10 430 9.8E-160 T 13-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VEA_001722 aa65d80d87c097c53da0a66a6015af98 444 Pfam PF00344 SecY translocase 76 418 1.8E-117 T 13-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VEA_001722 aa65d80d87c097c53da0a66a6015af98 444 PIRSF PIRSF004557 10 442 1.2E-121 T 13-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VEA_001722 aa65d80d87c097c53da0a66a6015af98 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 371 389 1.9E-95 T 13-10-2018 VEA_001722 aa65d80d87c097c53da0a66a6015af98 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 403 421 1.9E-95 T 13-10-2018 VEA_001722 aa65d80d87c097c53da0a66a6015af98 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 152 177 1.9E-95 T 13-10-2018 VEA_001722 aa65d80d87c097c53da0a66a6015af98 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 178 201 1.9E-95 T 13-10-2018 VEA_001722 aa65d80d87c097c53da0a66a6015af98 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 1.9E-95 T 13-10-2018 VEA_001722 aa65d80d87c097c53da0a66a6015af98 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 1.9E-95 T 13-10-2018 VEA_001722 aa65d80d87c097c53da0a66a6015af98 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 316 338 1.9E-95 T 13-10-2018 VEA_001722 aa65d80d87c097c53da0a66a6015af98 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 1.9E-95 T 13-10-2018 VEA_001722 aa65d80d87c097c53da0a66a6015af98 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 270 289 1.9E-95 T 13-10-2018 VEA_000752 7b9135b73c9338aafdd0798bd4c8424b 276 Gene3D G3DSA:1.10.10.10 1 69 2.9E-9 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000752 7b9135b73c9338aafdd0798bd4c8424b 276 Gene3D G3DSA:3.40.190.10 72 269 2.3E-13 T 13-10-2018 VEA_000752 7b9135b73c9338aafdd0798bd4c8424b 276 Pfam PF03466 LysR substrate binding domain 98 272 8.6E-11 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_000752 7b9135b73c9338aafdd0798bd4c8424b 276 Gene3D G3DSA:3.40.190.10 153 244 2.3E-13 T 13-10-2018 VEA_000752 7b9135b73c9338aafdd0798bd4c8424b 276 SUPERFAMILY SSF46785 2 67 1.27E-7 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000752 7b9135b73c9338aafdd0798bd4c8424b 276 SUPERFAMILY SSF53850 72 272 1.32E-17 T 13-10-2018 VEA_003805 a4bb9de743460e1421b2d51810790936 402 Gene3D G3DSA:3.90.1150.10 256 391 6.4E-40 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEA_003805 a4bb9de743460e1421b2d51810790936 402 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 387 1.9E-116 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VEA_003805 a4bb9de743460e1421b2d51810790936 402 PIRSF PIRSF001434 1 391 5.7E-125 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VEA_003805 a4bb9de743460e1421b2d51810790936 402 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 7 389 4.1E-173 T 13-10-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 VEA_003805 a4bb9de743460e1421b2d51810790936 402 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 199 213 - T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VEA_003805 a4bb9de743460e1421b2d51810790936 402 Gene3D G3DSA:3.40.640.10 3 255 2.7E-78 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_003805 a4bb9de743460e1421b2d51810790936 402 SUPERFAMILY SSF53383 21 388 6.99E-99 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_003024 808686163812bcef125c2b79df4c3080 233 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 57 70 - T 13-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VEA_003024 808686163812bcef125c2b79df4c3080 233 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 225 3.9E-51 T 13-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VEA_003024 808686163812bcef125c2b79df4c3080 233 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 6 226 4.5E-58 T 13-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VEA_003024 808686163812bcef125c2b79df4c3080 233 SMART SM00934 5 226 2.3E-101 T 13-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VEA_003024 808686163812bcef125c2b79df4c3080 233 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 231 40.536 T 13-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VEA_003024 808686163812bcef125c2b79df4c3080 233 Gene3D G3DSA:3.20.20.70 2 232 1.0E-85 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_003024 808686163812bcef125c2b79df4c3080 233 SUPERFAMILY SSF51366 1 228 3.77E-77 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VEA_001295 e348ed5bedf180d7c4ef158ac3e7b0ec 438 SUPERFAMILY SSF51905 32 397 1.86E-28 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_001295 e348ed5bedf180d7c4ef158ac3e7b0ec 438 Pfam PF01266 FAD dependent oxidoreductase 33 390 2.1E-33 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VEA_001295 e348ed5bedf180d7c4ef158ac3e7b0ec 438 Gene3D G3DSA:3.30.9.10 125 353 1.2E-41 T 13-10-2018 VEA_001295 e348ed5bedf180d7c4ef158ac3e7b0ec 438 Gene3D G3DSA:3.50.50.60 33 392 1.2E-41 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_004489 759729f7d2b6db8a5a40b1ae6ecfef01 485 SUPERFAMILY SSF53244 326 473 1.83E-48 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VEA_004489 759729f7d2b6db8a5a40b1ae6ecfef01 485 Gene3D G3DSA:3.90.190.20 326 481 2.2E-49 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VEA_004489 759729f7d2b6db8a5a40b1ae6ecfef01 485 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 25 473 2.5E-188 T 13-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VEA_004489 759729f7d2b6db8a5a40b1ae6ecfef01 485 Pfam PF08245 Mur ligase middle domain 127 307 3.1E-29 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VEA_004489 759729f7d2b6db8a5a40b1ae6ecfef01 485 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 22 479 43.997 T 13-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VEA_004489 759729f7d2b6db8a5a40b1ae6ecfef01 485 SUPERFAMILY SSF51984 23 109 1.57E-29 T 13-10-2018 VEA_004489 759729f7d2b6db8a5a40b1ae6ecfef01 485 Pfam PF01225 Mur ligase family, catalytic domain 25 121 3.0E-28 T 13-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 VEA_004489 759729f7d2b6db8a5a40b1ae6ecfef01 485 Gene3D G3DSA:3.40.1190.10 111 325 6.9E-85 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VEA_004489 759729f7d2b6db8a5a40b1ae6ecfef01 485 Gene3D G3DSA:3.40.50.720 23 110 5.2E-34 T 13-10-2018 VEA_004489 759729f7d2b6db8a5a40b1ae6ecfef01 485 Pfam PF02875 Mur ligase family, glutamate ligase domain 329 417 3.5E-21 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VEA_004489 759729f7d2b6db8a5a40b1ae6ecfef01 485 SUPERFAMILY SSF53623 108 322 6.15E-73 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VEA_002303 43942eb2a139b1e3cf034c15602c081c 425 SMART SM01274 28 161 8.6E-75 T 13-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VEA_002303 43942eb2a139b1e3cf034c15602c081c 425 SMART SM00919 173 409 1.1E-142 T 13-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 VEA_002303 43942eb2a139b1e3cf034c15602c081c 425 Gene3D G3DSA:3.40.50.10380 7 170 1.3E-66 T 13-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 VEA_002303 43942eb2a139b1e3cf034c15602c081c 425 ProSitePatterns PS00331 Malic enzymes signature. 169 185 - T 13-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 VEA_002303 43942eb2a139b1e3cf034c15602c081c 425 Pfam PF03949 Malic enzyme, NAD binding domain 175 366 3.3E-26 T 13-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 VEA_002303 43942eb2a139b1e3cf034c15602c081c 425 SUPERFAMILY SSF51735 173 420 1.8E-81 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_002303 43942eb2a139b1e3cf034c15602c081c 425 PIRSF PIRSF000106 51 127 3.8E-10 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VEA_002303 43942eb2a139b1e3cf034c15602c081c 425 PIRSF PIRSF000106 119 425 1.3E-63 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VEA_002303 43942eb2a139b1e3cf034c15602c081c 425 Gene3D G3DSA:3.40.50.720 171 425 7.8E-84 T 13-10-2018 VEA_002303 43942eb2a139b1e3cf034c15602c081c 425 Pfam PF00390 Malic enzyme, N-terminal domain 31 160 6.5E-27 T 13-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VEA_002303 43942eb2a139b1e3cf034c15602c081c 425 SUPERFAMILY SSF53223 20 171 3.31E-52 T 13-10-2018 VEA_003857 fae8b9f0f3a1c8e715d2a14cf1fa9f3e 456 Gene3D G3DSA:1.10.40.30 383 446 3.6E-158 T 13-10-2018 VEA_003857 fae8b9f0f3a1c8e715d2a14cf1fa9f3e 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 3.9E-18 T 13-10-2018 IPR000362 Fumarate lyase family VEA_003857 fae8b9f0f3a1c8e715d2a14cf1fa9f3e 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 3.9E-18 T 13-10-2018 IPR000362 Fumarate lyase family VEA_003857 fae8b9f0f3a1c8e715d2a14cf1fa9f3e 456 PRINTS PR00149 Fumarate lyase superfamily signature 252 279 3.9E-18 T 13-10-2018 IPR000362 Fumarate lyase family VEA_003857 fae8b9f0f3a1c8e715d2a14cf1fa9f3e 456 PRINTS PR00149 Fumarate lyase superfamily signature 295 311 3.9E-18 T 13-10-2018 IPR000362 Fumarate lyase family VEA_003857 fae8b9f0f3a1c8e715d2a14cf1fa9f3e 456 Gene3D G3DSA:1.20.200.10 118 447 3.6E-158 T 13-10-2018 VEA_003857 fae8b9f0f3a1c8e715d2a14cf1fa9f3e 456 SUPERFAMILY SSF48557 4 448 1.32E-108 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 VEA_003857 fae8b9f0f3a1c8e715d2a14cf1fa9f3e 456 Pfam PF00206 Lyase 14 313 1.0E-74 T 13-10-2018 IPR022761 Fumarate lyase, N-terminal VEA_003857 fae8b9f0f3a1c8e715d2a14cf1fa9f3e 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 456 1.9E-150 T 13-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VEA_003857 fae8b9f0f3a1c8e715d2a14cf1fa9f3e 456 ProSitePatterns PS00163 Fumarate lyases signature. 295 304 - T 13-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 VEA_003857 fae8b9f0f3a1c8e715d2a14cf1fa9f3e 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 332 446 8.4E-52 T 13-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 VEA_003857 fae8b9f0f3a1c8e715d2a14cf1fa9f3e 456 Gene3D G3DSA:1.10.275.10 1 117 1.1E-49 T 13-10-2018 IPR024083 Fumarase/histidase, N-terminal VEA_003207 50bab60209b82080287e2217778741f4 148 Pfam PF13508 Acetyltransferase (GNAT) domain 45 125 8.4E-12 T 13-10-2018 IPR000182 GNAT domain VEA_003207 50bab60209b82080287e2217778741f4 148 Gene3D G3DSA:3.40.630.30 8 127 2.5E-16 T 13-10-2018 VEA_003207 50bab60209b82080287e2217778741f4 148 SUPERFAMILY SSF55729 27 132 5.67E-21 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_004105 1b01b6b6347fcc0591c62146ea64f394 1125 SMART SM00342 1034 1116 5.2E-24 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_004105 1b01b6b6347fcc0591c62146ea64f394 1125 Gene3D G3DSA:3.30.565.10 850 987 3.2E-5 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_004105 1b01b6b6347fcc0591c62146ea64f394 1125 SUPERFAMILY SSF63829 249 447 8.17E-13 T 13-10-2018 VEA_004105 1b01b6b6347fcc0591c62146ea64f394 1125 SUPERFAMILY SSF46689 1070 1115 5.38E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_004105 1b01b6b6347fcc0591c62146ea64f394 1125 Gene3D G3DSA:2.130.10.10 379 616 1.9E-19 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VEA_004105 1b01b6b6347fcc0591c62146ea64f394 1125 Gene3D G3DSA:1.10.10.60 1013 1125 1.1E-24 T 13-10-2018 VEA_004105 1b01b6b6347fcc0591c62146ea64f394 1125 Gene3D G3DSA:2.130.10.10 40 312 1.9E-19 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VEA_004105 1b01b6b6347fcc0591c62146ea64f394 1125 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1071 1112 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VEA_004105 1b01b6b6347fcc0591c62146ea64f394 1125 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1085 1100 1.6E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEA_004105 1b01b6b6347fcc0591c62146ea64f394 1125 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1100 1116 1.6E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEA_004105 1b01b6b6347fcc0591c62146ea64f394 1125 Pfam PF12833 Helix-turn-helix domain 1041 1115 1.1E-20 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_004105 1b01b6b6347fcc0591c62146ea64f394 1125 SUPERFAMILY SSF55874 853 942 3.81E-5 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_000378 39dfe204242f0b6ba1d606cbeeca4cb9 535 SUPERFAMILY SSF52096 24 267 3.27E-73 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEA_000378 39dfe204242f0b6ba1d606cbeeca4cb9 535 SUPERFAMILY SSF52096 237 517 1.15E-84 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEA_000378 39dfe204242f0b6ba1d606cbeeca4cb9 535 Gene3D G3DSA:3.90.226.10 273 535 2.5E-104 T 13-10-2018 VEA_000378 39dfe204242f0b6ba1d606cbeeca4cb9 535 Gene3D G3DSA:3.90.226.10 1 270 5.2E-98 T 13-10-2018 VEA_000378 39dfe204242f0b6ba1d606cbeeca4cb9 535 Pfam PF01039 Carboxyl transferase domain 48 525 4.5E-152 T 13-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 VEA_000731 bdff7a3dc50921b4eb8e0616149823f2 457 Pfam PF00460 Flagella basal body rod protein 5 33 6.3E-7 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VEA_000731 bdff7a3dc50921b4eb8e0616149823f2 457 SUPERFAMILY SSF64518 133 457 1.22E-24 T 13-10-2018 VEA_000731 bdff7a3dc50921b4eb8e0616149823f2 457 PRINTS PR01005 Flagellar hook-associated protein signature 48 70 2.7E-8 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VEA_000731 bdff7a3dc50921b4eb8e0616149823f2 457 PRINTS PR01005 Flagellar hook-associated protein signature 10 33 2.7E-8 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VEA_000731 bdff7a3dc50921b4eb8e0616149823f2 457 PRINTS PR01005 Flagellar hook-associated protein signature 155 179 2.7E-8 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VEA_000731 bdff7a3dc50921b4eb8e0616149823f2 457 PRINTS PR01005 Flagellar hook-associated protein signature 122 142 2.7E-8 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VEA_000731 bdff7a3dc50921b4eb8e0616149823f2 457 PRINTS PR01005 Flagellar hook-associated protein signature 213 231 2.7E-8 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VEA_000731 bdff7a3dc50921b4eb8e0616149823f2 457 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 2 456 5.7E-119 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VEA_000731 bdff7a3dc50921b4eb8e0616149823f2 457 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 409 456 5.0E-7 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VEA_002086 b446f1f78728c849f807f1a88418abf4 724 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 272 1.6E-74 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 VEA_002086 b446f1f78728c849f807f1a88418abf4 724 TIGRFAM TIGR01075 uvrD: DNA helicase II 7 722 0.0 T 13-10-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 VEA_002086 b446f1f78728c849f807f1a88418abf4 724 Pfam PF13361 UvrD-like helicase C-terminal domain 278 617 1.2E-79 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VEA_002086 b446f1f78728c849f807f1a88418abf4 724 Gene3D G3DSA:1.10.486.10 383 539 1.2E-132 T 13-10-2018 VEA_002086 b446f1f78728c849f807f1a88418abf4 724 SUPERFAMILY SSF52540 8 643 2.58E-181 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002086 b446f1f78728c849f807f1a88418abf4 724 Gene3D G3DSA:3.40.50.300 11 274 1.5E-97 T 13-10-2018 VEA_002086 b446f1f78728c849f807f1a88418abf4 724 Gene3D G3DSA:1.10.10.160 115 188 1.5E-97 T 13-10-2018 IPR013986 DExx box DNA helicase domain superfamily VEA_002086 b446f1f78728c849f807f1a88418abf4 724 Gene3D G3DSA:3.40.50.300 282 637 1.2E-132 T 13-10-2018 VEA_002596 152db6005ed356168e5771485b122d42 395 SMART SM00363 334 393 4.1E-4 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_002596 152db6005ed356168e5771485b122d42 395 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEA_002596 152db6005ed356168e5771485b122d42 395 Pfam PF00579 tRNA synthetases class I (W and Y) 30 316 4.3E-79 T 13-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEA_002596 152db6005ed356168e5771485b122d42 395 Gene3D G3DSA:3.40.50.620 5 217 1.1E-72 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_002596 152db6005ed356168e5771485b122d42 395 SUPERFAMILY SSF52374 6 316 1.05E-97 T 13-10-2018 VEA_002596 152db6005ed356168e5771485b122d42 395 Pfam PF01479 S4 domain 338 374 6.6E-5 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_002596 152db6005ed356168e5771485b122d42 395 Gene3D G3DSA:1.10.240.10 218 325 1.7E-34 T 13-10-2018 VEA_002596 152db6005ed356168e5771485b122d42 395 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 394 48.294 T 13-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 VEA_002596 152db6005ed356168e5771485b122d42 395 SUPERFAMILY SSF55174 320 394 1.44E-15 T 13-10-2018 VEA_002596 152db6005ed356168e5771485b122d42 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 1.3E-24 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VEA_002596 152db6005ed356168e5771485b122d42 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 1.3E-24 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VEA_002596 152db6005ed356168e5771485b122d42 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 1.3E-24 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VEA_002596 152db6005ed356168e5771485b122d42 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 1.3E-24 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VEA_002596 152db6005ed356168e5771485b122d42 395 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 394 7.8E-126 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VEA_002596 152db6005ed356168e5771485b122d42 395 Gene3D G3DSA:3.10.290.10 326 394 2.8E-15 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VEA_003476 931f718805667f1ff53f316a85387016 254 Pfam PF00582 Universal stress protein family 117 240 4.4E-14 T 13-10-2018 IPR006016 UspA VEA_003476 931f718805667f1ff53f316a85387016 254 Pfam PF00582 Universal stress protein family 17 87 3.8E-8 T 13-10-2018 IPR006016 UspA VEA_003476 931f718805667f1ff53f316a85387016 254 Gene3D G3DSA:3.40.50.12370 1 252 1.3E-91 T 13-10-2018 VEA_003476 931f718805667f1ff53f316a85387016 254 SUPERFAMILY SSF52402 105 247 7.79E-23 T 13-10-2018 VEA_003476 931f718805667f1ff53f316a85387016 254 SUPERFAMILY SSF52402 2 96 2.01E-17 T 13-10-2018 VEA_000512 76f0d2360edbd3efa3d5f87efa71c9e5 102 Hamap MF_02200 Chaperone NapD [napD]. 6 82 19.218 T 13-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly VEA_000512 76f0d2360edbd3efa3d5f87efa71c9e5 102 Gene3D G3DSA:3.30.70.920 6 75 3.7E-22 T 13-10-2018 VEA_000512 76f0d2360edbd3efa3d5f87efa71c9e5 102 Pfam PF03927 NapD protein 6 80 1.6E-29 T 13-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly VEA_001967 a57fd84ab3d16e898bfe2c08544aa4f3 190 Gene3D G3DSA:1.10.10.10 125 189 5.3E-7 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001967 a57fd84ab3d16e898bfe2c08544aa4f3 190 SUPERFAMILY SSF88659 123 187 4.3E-6 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VEA_001967 a57fd84ab3d16e898bfe2c08544aa4f3 190 TIGRFAM TIGR02999 Sig-70_X6: RNA polymerase sigma factor, TIGR02999 family 6 187 2.7E-57 T 13-10-2018 IPR011517 RNA polymerase sigma-70 ECF-like VEA_001967 a57fd84ab3d16e898bfe2c08544aa4f3 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 187 8.8E-18 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VEA_001967 a57fd84ab3d16e898bfe2c08544aa4f3 190 Pfam PF07638 ECF sigma factor 7 188 2.5E-30 T 13-10-2018 IPR011517 RNA polymerase sigma-70 ECF-like VEA_004080 97c27bb5d38c5724fc6b61d022eff83f 522 Pfam PF13649 Methyltransferase domain 1 95 2.4E-11 T 13-10-2018 VEA_004080 97c27bb5d38c5724fc6b61d022eff83f 522 Gene3D G3DSA:3.40.50.150 1 144 4.3E-22 T 13-10-2018 VEA_004080 97c27bb5d38c5724fc6b61d022eff83f 522 Pfam PF13395 HNH endonuclease 413 451 1.5E-4 T 13-10-2018 IPR003615 HNH nuclease VEA_004080 97c27bb5d38c5724fc6b61d022eff83f 522 SUPERFAMILY SSF53335 1 128 1.01E-22 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_001554 453d5fefd7e67d99efb451289f2b9941 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 9.2E-94 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001554 453d5fefd7e67d99efb451289f2b9941 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 9.2E-94 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001554 453d5fefd7e67d99efb451289f2b9941 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 9.2E-94 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001554 453d5fefd7e67d99efb451289f2b9941 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 9.2E-94 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001554 453d5fefd7e67d99efb451289f2b9941 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 9.2E-94 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001554 453d5fefd7e67d99efb451289f2b9941 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 9.2E-94 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001554 453d5fefd7e67d99efb451289f2b9941 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 9.2E-94 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001554 453d5fefd7e67d99efb451289f2b9941 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 9.2E-94 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001554 453d5fefd7e67d99efb451289f2b9941 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 9.2E-94 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001554 453d5fefd7e67d99efb451289f2b9941 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 9.2E-94 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001554 453d5fefd7e67d99efb451289f2b9941 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 9.2E-94 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001554 453d5fefd7e67d99efb451289f2b9941 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 9.2E-94 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001554 453d5fefd7e67d99efb451289f2b9941 678 SUPERFAMILY SSF81442 43 557 3.53E-176 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001554 453d5fefd7e67d99efb451289f2b9941 678 Gene3D G3DSA:1.20.210.10 52 552 6.4E-184 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001554 453d5fefd7e67d99efb451289f2b9941 678 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 13-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001554 453d5fefd7e67d99efb451289f2b9941 678 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 648 0.0 T 13-10-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 VEA_001554 453d5fefd7e67d99efb451289f2b9941 678 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 57 503 1.9E-132 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_004072 c24fd453a1d8dad769702dc60b1d460d 206 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 39 192 5.0E-12 T 13-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like VEA_004072 c24fd453a1d8dad769702dc60b1d460d 206 Gene3D G3DSA:2.50.20.10 26 206 2.1E-25 T 13-10-2018 VEA_004072 c24fd453a1d8dad769702dc60b1d460d 206 SUPERFAMILY SSF89392 27 192 3.92E-20 T 13-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX VEA_004038 876da6405abf9f47c20333a1666e525d 183 Gene3D G3DSA:1.20.1540.10 1 181 3.6E-20 T 13-10-2018 IPR035952 Rhomboid-like superfamily VEA_004038 876da6405abf9f47c20333a1666e525d 183 Pfam PF01694 Rhomboid family 34 173 4.6E-14 T 13-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 VEA_004038 876da6405abf9f47c20333a1666e525d 183 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 24 172 5.2E-48 T 13-10-2018 IPR023826 Rhomboid-like serine protease, proteobacteria VEA_004038 876da6405abf9f47c20333a1666e525d 183 SUPERFAMILY SSF144091 4 178 3.14E-28 T 13-10-2018 VEA_003893 ada0520ec481f20df70e382673bf1913 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 58 74 4.9E-10 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEA_003893 ada0520ec481f20df70e382673bf1913 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 94 110 4.9E-10 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEA_003893 ada0520ec481f20df70e382673bf1913 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 124 144 4.9E-10 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEA_003893 ada0520ec481f20df70e382673bf1913 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 90 4.9E-10 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEA_003893 ada0520ec481f20df70e382673bf1913 151 SUPERFAMILY SSF46785 7 145 1.08E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_003893 ada0520ec481f20df70e382673bf1913 151 ProSitePatterns PS01117 MarR-type HTH domain signature. 72 107 - T 13-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site VEA_003893 ada0520ec481f20df70e382673bf1913 151 SMART SM00347 33 134 4.1E-17 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEA_003893 ada0520ec481f20df70e382673bf1913 151 Pfam PF01047 MarR family 46 97 7.1E-11 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEA_003893 ada0520ec481f20df70e382673bf1913 151 Gene3D G3DSA:1.10.10.10 2 146 8.4E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001835 70665962ab3b1dd9ca9fbb1519de4a24 145 Gene3D G3DSA:3.30.420.10 2 145 1.2E-19 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VEA_001835 70665962ab3b1dd9ca9fbb1519de4a24 145 Pfam PF00075 RNase H 4 126 5.1E-13 T 13-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 VEA_001835 70665962ab3b1dd9ca9fbb1519de4a24 145 SUPERFAMILY SSF53098 4 143 8.85E-20 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VEA_002042 494081e7a06493be6d49011855a13b08 507 SUPERFAMILY SSF54211 2 169 1.82E-30 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEA_002042 494081e7a06493be6d49011855a13b08 507 Gene3D G3DSA:3.40.50.300 190 500 3.3E-55 T 13-10-2018 VEA_002042 494081e7a06493be6d49011855a13b08 507 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 3.4E-48 T 13-10-2018 VEA_002042 494081e7a06493be6d49011855a13b08 507 SMART SM00382 210 390 2.4E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_002042 494081e7a06493be6d49011855a13b08 507 Gene3D G3DSA:3.30.230.10 1 166 8.5E-6 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VEA_002042 494081e7a06493be6d49011855a13b08 507 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 493 4.1E-210 T 13-10-2018 IPR004482 Mg chelatase-related protein VEA_002042 494081e7a06493be6d49011855a13b08 507 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 493 2.0E-29 T 13-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain VEA_002042 494081e7a06493be6d49011855a13b08 507 SUPERFAMILY SSF52540 188 501 5.85E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002042 494081e7a06493be6d49011855a13b08 507 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 391 6.4E-90 T 13-10-2018 IPR000523 Magnesium chelatase ChlI domain VEA_002042 494081e7a06493be6d49011855a13b08 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 289 303 7.6E-5 T 13-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 VEA_002042 494081e7a06493be6d49011855a13b08 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 7.6E-5 T 13-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 VEA_002042 494081e7a06493be6d49011855a13b08 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 317 330 7.6E-5 T 13-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 VEA_000465 45ed83549692944a9f1de89c72f57145 2839 SUPERFAMILY SSF56925 2658 2833 2.01E-9 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VEA_000465 45ed83549692944a9f1de89c72f57145 2839 Gene3D G3DSA:2.60.40.10 491 590 2.6E-11 T 13-10-2018 IPR013783 Immunoglobulin-like fold VEA_000465 45ed83549692944a9f1de89c72f57145 2839 Gene3D G3DSA:2.60.40.10 594 694 2.6E-12 T 13-10-2018 IPR013783 Immunoglobulin-like fold VEA_000465 45ed83549692944a9f1de89c72f57145 2839 Gene3D G3DSA:2.60.40.10 387 486 8.1E-11 T 13-10-2018 IPR013783 Immunoglobulin-like fold VEA_000465 45ed83549692944a9f1de89c72f57145 2839 Gene3D G3DSA:2.40.160.20 2655 2835 5.6E-15 T 13-10-2018 VEA_000465 45ed83549692944a9f1de89c72f57145 2839 Gene3D G3DSA:2.60.40.10 282 386 9.5E-15 T 13-10-2018 IPR013783 Immunoglobulin-like fold VEA_000465 45ed83549692944a9f1de89c72f57145 2839 SUPERFAMILY SSF49313 1662 1754 5.49E-16 T 13-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 VEA_000465 45ed83549692944a9f1de89c72f57145 2839 Gene3D G3DSA:2.60.40.10 1568 1659 3.6E-14 T 13-10-2018 IPR013783 Immunoglobulin-like fold VEA_000465 45ed83549692944a9f1de89c72f57145 2839 Gene3D G3DSA:2.60.40.10 1661 1751 3.5E-13 T 13-10-2018 IPR013783 Immunoglobulin-like fold VEA_000465 45ed83549692944a9f1de89c72f57145 2839 Gene3D G3DSA:2.60.40.10 1753 1842 2.8E-15 T 13-10-2018 IPR013783 Immunoglobulin-like fold VEA_000465 45ed83549692944a9f1de89c72f57145 2839 SMART SM00736 1757 1848 1.2E-10 T 13-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 VEA_000465 45ed83549692944a9f1de89c72f57145 2839 SMART SM00736 1665 1756 4.3E-7 T 13-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 VEA_000465 45ed83549692944a9f1de89c72f57145 2839 SMART SM00736 1571 1664 5.7E-6 T 13-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 VEA_000465 45ed83549692944a9f1de89c72f57145 2839 Pfam PF05345 Putative Ig domain 1701 1727 1.2E-4 T 13-10-2018 IPR008009 Putative Ig VEA_000465 45ed83549692944a9f1de89c72f57145 2839 SUPERFAMILY SSF141072 2021 2114 1.33E-5 T 13-10-2018 IPR038081 CalX-like domain superfamily VEA_000465 45ed83549692944a9f1de89c72f57145 2839 SUPERFAMILY SSF49313 1571 1662 1.65E-15 T 13-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 VEA_000465 45ed83549692944a9f1de89c72f57145 2839 Pfam PF13205 Bacterial Ig-like domain 151 275 6.2E-16 T 13-10-2018 IPR032812 SbsA, Ig-like domain VEA_000465 45ed83549692944a9f1de89c72f57145 2839 SUPERFAMILY SSF49313 1754 1846 1.57E-17 T 13-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 VEA_001315 e0497ddfac70d04f3912fc1356dea87d 106 SMART SM01022 8 106 1.3E-24 T 13-10-2018 IPR007374 ASCH domain VEA_001315 e0497ddfac70d04f3912fc1356dea87d 106 Pfam PF04266 ASCH domain 9 105 9.3E-16 T 13-10-2018 IPR007374 ASCH domain VEA_001315 e0497ddfac70d04f3912fc1356dea87d 106 Gene3D G3DSA:2.30.130.30 3 105 1.7E-43 T 13-10-2018 VEA_001315 e0497ddfac70d04f3912fc1356dea87d 106 SUPERFAMILY SSF88697 5 105 9.69E-32 T 13-10-2018 IPR015947 PUA-like superfamily VEA_001315 e0497ddfac70d04f3912fc1356dea87d 106 PIRSF PIRSF029143 3 106 1.2E-46 T 13-10-2018 IPR008314 Uncharacterised conserved protein UCP029143 VEA_000109 286483e1daea28611055b94c71eb73a4 461 PIRSF PIRSF006603 2 461 2.0E-68 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEA_000109 286483e1daea28611055b94c71eb73a4 461 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 421 1.4E-54 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEA_000109 286483e1daea28611055b94c71eb73a4 461 Pfam PF01554 MatE 249 411 5.7E-16 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEA_000109 286483e1daea28611055b94c71eb73a4 461 Pfam PF01554 MatE 22 182 8.0E-36 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEA_000333 a60a3b1d5eaa8ba8959bc9b30e68fc7e 226 Pfam PF00027 Cyclic nucleotide-binding domain 34 121 7.2E-12 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain VEA_000333 a60a3b1d5eaa8ba8959bc9b30e68fc7e 226 Gene3D G3DSA:2.60.120.10 18 144 7.1E-16 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VEA_000333 a60a3b1d5eaa8ba8959bc9b30e68fc7e 226 SUPERFAMILY SSF51206 20 143 2.36E-20 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like VEA_002913 be3a126681010c86bbd1854c4a630c3e 616 Gene3D G3DSA:3.90.226.10 315 540 5.7E-162 T 13-10-2018 VEA_002913 be3a126681010c86bbd1854c4a630c3e 616 SUPERFAMILY SSF52096 53 284 2.09E-29 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEA_002913 be3a126681010c86bbd1854c4a630c3e 616 Pfam PF01343 Peptidase family S49 138 294 8.9E-31 T 13-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 VEA_002913 be3a126681010c86bbd1854c4a630c3e 616 Pfam PF01343 Peptidase family S49 391 541 7.8E-46 T 13-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 VEA_002913 be3a126681010c86bbd1854c4a630c3e 616 SUPERFAMILY SSF52096 315 529 4.28E-41 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEA_002913 be3a126681010c86bbd1854c4a630c3e 616 Gene3D G3DSA:3.40.1750.10 186 497 5.7E-162 T 13-10-2018 VEA_002913 be3a126681010c86bbd1854c4a630c3e 616 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 327 539 3.2E-52 T 13-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 VEA_002913 be3a126681010c86bbd1854c4a630c3e 616 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 608 2.7E-192 T 13-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 VEA_002913 be3a126681010c86bbd1854c4a630c3e 616 PIRSF PIRSF001217 8 616 1.5E-227 T 13-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 VEA_002913 be3a126681010c86bbd1854c4a630c3e 616 Gene3D G3DSA:3.90.226.10 94 314 5.7E-162 T 13-10-2018 VEA_000771 23505845884b3d9722cf3cc3d13bd98f 147 Gene3D G3DSA:3.40.930.10 1 147 2.2E-57 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VEA_000771 23505845884b3d9722cf3cc3d13bd98f 147 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 13-10-2018 IPR002178 PTS EIIA type-2 domain VEA_000771 23505845884b3d9722cf3cc3d13bd98f 147 SUPERFAMILY SSF55804 1 146 6.02E-42 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VEA_000771 23505845884b3d9722cf3cc3d13bd98f 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 146 3.3E-37 T 13-10-2018 IPR002178 PTS EIIA type-2 domain VEA_001231 f5c62a9ba200b04457cb36d8082b012c 542 Gene3D G3DSA:1.10.287.950 213 542 3.4E-72 T 13-10-2018 VEA_001231 f5c62a9ba200b04457cb36d8082b012c 542 SMART SM00283 280 541 1.5E-65 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_001231 f5c62a9ba200b04457cb36d8082b012c 542 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 344 508 6.1E-41 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_001231 f5c62a9ba200b04457cb36d8082b012c 542 SMART SM00304 213 265 2.1E-11 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_001231 f5c62a9ba200b04457cb36d8082b012c 542 SUPERFAMILY SSF58104 233 542 3.53E-71 T 13-10-2018 VEA_001231 f5c62a9ba200b04457cb36d8082b012c 542 Pfam PF00672 HAMP domain 215 260 3.3E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_001780 5f440313af3d6c29a7353b057a77908a 308 Gene3D G3DSA:3.40.50.2000 117 289 2.7E-24 T 13-10-2018 VEA_001780 5f440313af3d6c29a7353b057a77908a 308 SUPERFAMILY SSF53756 41 306 4.44E-35 T 13-10-2018 VEA_001780 5f440313af3d6c29a7353b057a77908a 308 Pfam PF00534 Glycosyl transferases group 1 145 281 1.7E-11 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 VEA_001780 5f440313af3d6c29a7353b057a77908a 308 Gene3D G3DSA:3.40.50.2000 41 299 2.7E-24 T 13-10-2018 VEA_003390 7c15f40f9bf8d2ace01f205bfd183e6a 863 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 32 859 2.0E-291 T 13-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 VEA_003390 7c15f40f9bf8d2ace01f205bfd183e6a 863 Pfam PF00330 Aconitase family (aconitate hydratase) 74 537 1.4E-146 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEA_003390 7c15f40f9bf8d2ace01f205bfd183e6a 863 Gene3D G3DSA:3.30.499.10 361 565 2.7E-78 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 VEA_003390 7c15f40f9bf8d2ace01f205bfd183e6a 863 Gene3D G3DSA:1.10.1440.20 566 622 1.3E-9 T 13-10-2018 VEA_003390 7c15f40f9bf8d2ace01f205bfd183e6a 863 Gene3D G3DSA:3.20.19.10 623 861 2.4E-83 T 13-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 VEA_003390 7c15f40f9bf8d2ace01f205bfd183e6a 863 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 6 862 0.0 T 13-10-2018 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 VEA_003390 7c15f40f9bf8d2ace01f205bfd183e6a 863 Gene3D G3DSA:3.30.499.20 10 360 7.1E-132 T 13-10-2018 VEA_003390 7c15f40f9bf8d2ace01f205bfd183e6a 863 Pfam PF00694 Aconitase C-terminal domain 660 790 3.5E-30 T 13-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 VEA_003390 7c15f40f9bf8d2ace01f205bfd183e6a 863 SUPERFAMILY SSF53732 17 594 1.96E-188 T 13-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 VEA_003390 7c15f40f9bf8d2ace01f205bfd183e6a 863 SUPERFAMILY SSF52016 602 860 1.33E-67 T 13-10-2018 VEA_003390 7c15f40f9bf8d2ace01f205bfd183e6a 863 PRINTS PR00415 Aconitase family signature 209 224 2.1E-26 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEA_003390 7c15f40f9bf8d2ace01f205bfd183e6a 863 PRINTS PR00415 Aconitase family signature 271 284 2.1E-26 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEA_003390 7c15f40f9bf8d2ace01f205bfd183e6a 863 PRINTS PR00415 Aconitase family signature 468 481 2.1E-26 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEA_003390 7c15f40f9bf8d2ace01f205bfd183e6a 863 PRINTS PR00415 Aconitase family signature 142 155 2.1E-26 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEA_003390 7c15f40f9bf8d2ace01f205bfd183e6a 863 PRINTS PR00415 Aconitase family signature 166 174 2.1E-26 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEA_003390 7c15f40f9bf8d2ace01f205bfd183e6a 863 PRINTS PR00415 Aconitase family signature 195 208 2.1E-26 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEA_003390 7c15f40f9bf8d2ace01f205bfd183e6a 863 PRINTS PR00415 Aconitase family signature 364 378 2.1E-26 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEA_003390 7c15f40f9bf8d2ace01f205bfd183e6a 863 PRINTS PR00415 Aconitase family signature 285 298 2.1E-26 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEA_003390 7c15f40f9bf8d2ace01f205bfd183e6a 863 PRINTS PR00415 Aconitase family signature 406 417 2.1E-26 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VEA_000887 5a6e066b0d99f29a9cfe2547de93e0f2 615 SUPERFAMILY SSF55486 3 550 4.19E-76 T 13-10-2018 VEA_000887 5a6e066b0d99f29a9cfe2547de93e0f2 615 Pfam PF01432 Peptidase family M3 146 231 2.4E-4 T 13-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 VEA_000887 5a6e066b0d99f29a9cfe2547de93e0f2 615 Pfam PF01432 Peptidase family M3 285 490 3.5E-16 T 13-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 VEA_000887 5a6e066b0d99f29a9cfe2547de93e0f2 615 Gene3D G3DSA:3.40.390.10 281 380 2.5E-18 T 13-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 VEA_000887 5a6e066b0d99f29a9cfe2547de93e0f2 615 Gene3D G3DSA:1.10.1370.10 381 536 2.5E-18 T 13-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 VEA_000887 5a6e066b0d99f29a9cfe2547de93e0f2 615 Gene3D G3DSA:1.10.1370.10 73 243 4.4E-8 T 13-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 VEA_003793 02c83246ba3e4f6aed6d208c92cbd94f 386 Pfam PF13416 Bacterial extracellular solute-binding protein 61 353 4.5E-21 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein VEA_003793 02c83246ba3e4f6aed6d208c92cbd94f 386 Gene3D G3DSA:3.40.190.10 158 383 5.8E-14 T 13-10-2018 VEA_003793 02c83246ba3e4f6aed6d208c92cbd94f 386 PIRSF PIRSF029172 1 386 9.5E-177 T 13-10-2018 IPR027020 Protein ynjB VEA_003793 02c83246ba3e4f6aed6d208c92cbd94f 386 SUPERFAMILY SSF53850 39 384 4.04E-39 T 13-10-2018 VEA_003793 02c83246ba3e4f6aed6d208c92cbd94f 386 Gene3D G3DSA:3.40.190.10 74 359 5.8E-14 T 13-10-2018 VEA_002952 b505f50d6f22569c852d27344c946da8 114 Pfam PF01627 Hpt domain 26 102 1.7E-12 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VEA_002952 b505f50d6f22569c852d27344c946da8 114 Gene3D G3DSA:1.20.120.160 1 114 1.7E-28 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 VEA_002952 b505f50d6f22569c852d27344c946da8 114 SUPERFAMILY SSF47226 2 112 2.09E-25 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 VEA_002078 8f11a2e42bb4a49dd67124021a4eaf0f 564 Pfam PF00557 Metallopeptidase family M24 277 492 1.1E-43 T 13-10-2018 IPR000994 Peptidase M24 VEA_002078 8f11a2e42bb4a49dd67124021a4eaf0f 564 SUPERFAMILY SSF53092 9 98 7.15E-13 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VEA_002078 8f11a2e42bb4a49dd67124021a4eaf0f 564 SUPERFAMILY SSF55920 271 527 6.54E-56 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like VEA_002078 8f11a2e42bb4a49dd67124021a4eaf0f 564 Gene3D G3DSA:3.90.230.10 268 561 1.7E-95 T 13-10-2018 VEA_002078 8f11a2e42bb4a49dd67124021a4eaf0f 564 Gene3D G3DSA:3.40.350.10 115 260 1.1E-24 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VEA_002078 8f11a2e42bb4a49dd67124021a4eaf0f 564 Pfam PF01321 Creatinase/Prolidase N-terminal domain 8 101 3.9E-14 T 13-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 VEA_002078 8f11a2e42bb4a49dd67124021a4eaf0f 564 Gene3D G3DSA:3.40.350.10 1 114 2.1E-26 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VEA_002078 8f11a2e42bb4a49dd67124021a4eaf0f 564 Pfam PF16189 Creatinase/Prolidase N-terminal domain 116 274 3.1E-35 T 13-10-2018 VEA_002078 8f11a2e42bb4a49dd67124021a4eaf0f 564 Pfam PF16188 C-terminal region of peptidase_M24 502 560 3.4E-22 T 13-10-2018 IPR032416 Peptidase M24, C-terminal domain VEA_003692 69a261166fe83156b94306b3a0234026 224 Pfam PF02654 Cobalamin-5-phosphate synthase 4 215 1.7E-48 T 13-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 VEA_003692 69a261166fe83156b94306b3a0234026 224 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 8 216 1.6E-32 T 13-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 VEA_003692 69a261166fe83156b94306b3a0234026 224 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 224 41.128 T 13-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 VEA_002880 74a297a55eebea097b04432f20989680 291 Gene3D G3DSA:1.10.10.10 1 89 9.2E-30 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_002880 74a297a55eebea097b04432f20989680 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 5.1E-13 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_002880 74a297a55eebea097b04432f20989680 291 Pfam PF03466 LysR substrate binding domain 88 286 2.1E-40 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_002880 74a297a55eebea097b04432f20989680 291 SUPERFAMILY SSF53850 89 287 3.12E-38 T 13-10-2018 VEA_002880 74a297a55eebea097b04432f20989680 291 Gene3D G3DSA:3.40.190.290 90 290 1.7E-73 T 13-10-2018 VEA_002880 74a297a55eebea097b04432f20989680 291 SUPERFAMILY SSF46785 1 84 6.01E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_002519 22240bef91d5383fb8c7054a63401665 347 Gene3D G3DSA:3.30.250.10 268 326 2.1E-25 T 13-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal VEA_002519 22240bef91d5383fb8c7054a63401665 347 SUPERFAMILY SSF54752 269 325 8.5E-21 T 13-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal VEA_002519 22240bef91d5383fb8c7054a63401665 347 Gene3D G3DSA:3.40.50.300 26 267 2.4E-82 T 13-10-2018 VEA_002519 22240bef91d5383fb8c7054a63401665 347 Pfam PF00154 recA bacterial DNA recombination protein 7 267 1.6E-142 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VEA_002519 22240bef91d5383fb8c7054a63401665 347 PRINTS PR00142 RecA protein signature 297 314 3.3E-84 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VEA_002519 22240bef91d5383fb8c7054a63401665 347 PRINTS PR00142 RecA protein signature 93 122 3.3E-84 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VEA_002519 22240bef91d5383fb8c7054a63401665 347 PRINTS PR00142 RecA protein signature 243 272 3.3E-84 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VEA_002519 22240bef91d5383fb8c7054a63401665 347 PRINTS PR00142 RecA protein signature 210 238 3.3E-84 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VEA_002519 22240bef91d5383fb8c7054a63401665 347 PRINTS PR00142 RecA protein signature 127 156 3.3E-84 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VEA_002519 22240bef91d5383fb8c7054a63401665 347 PRINTS PR00142 RecA protein signature 165 194 3.3E-84 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VEA_002519 22240bef91d5383fb8c7054a63401665 347 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 2.1E-169 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VEA_002519 22240bef91d5383fb8c7054a63401665 347 SUPERFAMILY SSF52540 4 266 8.26E-65 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002519 22240bef91d5383fb8c7054a63401665 347 SMART SM00382 57 228 1.6E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_002519 22240bef91d5383fb8c7054a63401665 347 ProSitePatterns PS00321 recA signature. 213 221 - T 13-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 VEA_002519 22240bef91d5383fb8c7054a63401665 347 Hamap MF_00268 Protein RecA [recA]. 5 329 50.376 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VEA_004170 29a1005f73903dfdd14d9504a760e5b9 437 Pfam PF07559 Flagellar basal body protein FlaE 181 317 1.7E-22 T 13-10-2018 IPR011491 Flagellar hook protein FlgE VEA_004170 29a1005f73903dfdd14d9504a760e5b9 437 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 358 436 1.1E-15 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VEA_004170 29a1005f73903dfdd14d9504a760e5b9 437 SUPERFAMILY SSF117143 78 398 9.29E-70 T 13-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like VEA_004170 29a1005f73903dfdd14d9504a760e5b9 437 Pfam PF00460 Flagella basal body rod protein 3 32 7.3E-11 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VEA_004170 29a1005f73903dfdd14d9504a760e5b9 437 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 2 419 2.4E-96 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VEA_004170 29a1005f73903dfdd14d9504a760e5b9 437 Gene3D G3DSA:2.60.98.20 154 319 2.6E-22 T 13-10-2018 IPR037058 Flagellar hook protein FlgE superfamily VEA_004170 29a1005f73903dfdd14d9504a760e5b9 437 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 8 28 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site VEA_004122 2b10afc7d89d766e082fc64cdc4604b4 255 Pfam PF12697 Alpha/beta hydrolase family 16 247 8.8E-23 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEA_004122 2b10afc7d89d766e082fc64cdc4604b4 255 SUPERFAMILY SSF53474 5 254 6.51E-51 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_004122 2b10afc7d89d766e082fc64cdc4604b4 255 Gene3D G3DSA:3.40.50.1820 3 254 7.9E-66 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_004122 2b10afc7d89d766e082fc64cdc4604b4 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 96 109 2.6E-5 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEA_004122 2b10afc7d89d766e082fc64cdc4604b4 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 82 95 2.6E-5 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEA_004122 2b10afc7d89d766e082fc64cdc4604b4 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 200 214 2.6E-5 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEA_004122 2b10afc7d89d766e082fc64cdc4604b4 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 39 54 2.6E-5 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEA_004122 2b10afc7d89d766e082fc64cdc4604b4 255 PRINTS PR00412 Epoxide hydrolase signature 96 109 3.6E-6 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VEA_004122 2b10afc7d89d766e082fc64cdc4604b4 255 PRINTS PR00412 Epoxide hydrolase signature 230 252 3.6E-6 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VEA_004122 2b10afc7d89d766e082fc64cdc4604b4 255 PRINTS PR00412 Epoxide hydrolase signature 82 95 3.6E-6 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VEA_004122 2b10afc7d89d766e082fc64cdc4604b4 255 PRINTS PR00412 Epoxide hydrolase signature 39 54 3.6E-6 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VEA_002763 f62414fa8ec251bd3dac2e96bf0d329b 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 3.4E-164 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VEA_002763 f62414fa8ec251bd3dac2e96bf0d329b 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 7.3E-49 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VEA_002763 f62414fa8ec251bd3dac2e96bf0d329b 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 7.3E-49 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VEA_002763 f62414fa8ec251bd3dac2e96bf0d329b 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 7.3E-49 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VEA_002763 f62414fa8ec251bd3dac2e96bf0d329b 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 7.3E-49 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VEA_002763 f62414fa8ec251bd3dac2e96bf0d329b 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 7.3E-49 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VEA_002763 f62414fa8ec251bd3dac2e96bf0d329b 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 7.3E-49 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VEA_002763 f62414fa8ec251bd3dac2e96bf0d329b 319 SUPERFAMILY SSF52096 5 318 1.72E-105 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEA_002763 f62414fa8ec251bd3dac2e96bf0d329b 319 Gene3D G3DSA:3.90.226.10 4 319 3.2E-120 T 13-10-2018 VEA_002763 f62414fa8ec251bd3dac2e96bf0d329b 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.724 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VEA_002763 f62414fa8ec251bd3dac2e96bf0d329b 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 6 151 3.9E-63 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VEA_000828 1a288f71ff2418b3c0758e153eeffd12 640 TIGRFAM TIGR01273 speA: arginine decarboxylase 12 638 6.4E-267 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VEA_000828 1a288f71ff2418b3c0758e153eeffd12 640 PIRSF PIRSF001336 2 640 6.5E-251 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VEA_000828 1a288f71ff2418b3c0758e153eeffd12 640 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 340 359 2.2E-12 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VEA_000828 1a288f71ff2418b3c0758e153eeffd12 640 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 549 562 2.2E-12 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VEA_000828 1a288f71ff2418b3c0758e153eeffd12 640 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 246 259 2.2E-12 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VEA_000828 1a288f71ff2418b3c0758e153eeffd12 640 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 102 120 2.2E-12 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VEA_000828 1a288f71ff2418b3c0758e153eeffd12 640 SUPERFAMILY SSF51419 70 352 3.93E-64 T 13-10-2018 IPR029066 PLP-binding barrel VEA_000828 1a288f71ff2418b3c0758e153eeffd12 640 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 7 639 42.383 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VEA_000828 1a288f71ff2418b3c0758e153eeffd12 640 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 83 350 2.3E-49 T 13-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 VEA_000828 1a288f71ff2418b3c0758e153eeffd12 640 Gene3D G3DSA:3.20.20.10 71 355 4.5E-235 T 13-10-2018 IPR029066 PLP-binding barrel VEA_000828 1a288f71ff2418b3c0758e153eeffd12 640 Gene3D G3DSA:2.40.37.10 18 575 4.5E-235 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VEA_000828 1a288f71ff2418b3c0758e153eeffd12 640 PRINTS PR01180 Arginine decarboxylase signature 94 108 2.4E-63 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VEA_000828 1a288f71ff2418b3c0758e153eeffd12 640 PRINTS PR01180 Arginine decarboxylase signature 153 168 2.4E-63 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VEA_000828 1a288f71ff2418b3c0758e153eeffd12 640 PRINTS PR01180 Arginine decarboxylase signature 203 225 2.4E-63 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VEA_000828 1a288f71ff2418b3c0758e153eeffd12 640 PRINTS PR01180 Arginine decarboxylase signature 549 570 2.4E-63 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VEA_000828 1a288f71ff2418b3c0758e153eeffd12 640 PRINTS PR01180 Arginine decarboxylase signature 179 200 2.4E-63 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VEA_000828 1a288f71ff2418b3c0758e153eeffd12 640 PRINTS PR01180 Arginine decarboxylase signature 330 347 2.4E-63 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VEA_000828 1a288f71ff2418b3c0758e153eeffd12 640 PRINTS PR01180 Arginine decarboxylase signature 471 492 2.4E-63 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VEA_000828 1a288f71ff2418b3c0758e153eeffd12 640 PRINTS PR01180 Arginine decarboxylase signature 70 85 2.4E-63 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VEA_000828 1a288f71ff2418b3c0758e153eeffd12 640 PRINTS PR01180 Arginine decarboxylase signature 496 521 2.4E-63 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VEA_000828 1a288f71ff2418b3c0758e153eeffd12 640 Gene3D G3DSA:1.20.58.930 372 467 4.5E-235 T 13-10-2018 VEA_000420 bf9aa936e57711f8fd3b49a2fc39daac 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 1.0E-31 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000420 bf9aa936e57711f8fd3b49a2fc39daac 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 1.0E-31 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000420 bf9aa936e57711f8fd3b49a2fc39daac 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 1.0E-31 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000420 bf9aa936e57711f8fd3b49a2fc39daac 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 1.0E-31 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000420 bf9aa936e57711f8fd3b49a2fc39daac 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.0E-31 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000420 bf9aa936e57711f8fd3b49a2fc39daac 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 1.0E-31 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000420 bf9aa936e57711f8fd3b49a2fc39daac 239 Gene3D G3DSA:3.40.50.720 1 239 8.1E-77 T 13-10-2018 VEA_000420 bf9aa936e57711f8fd3b49a2fc39daac 239 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 162 0.0026 T 13-10-2018 VEA_000420 bf9aa936e57711f8fd3b49a2fc39daac 239 SUPERFAMILY SSF51735 3 223 2.38E-63 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_000420 bf9aa936e57711f8fd3b49a2fc39daac 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 4.1E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000420 bf9aa936e57711f8fd3b49a2fc39daac 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 4.1E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000420 bf9aa936e57711f8fd3b49a2fc39daac 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 4.1E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000420 bf9aa936e57711f8fd3b49a2fc39daac 239 Pfam PF00106 short chain dehydrogenase 3 188 5.5E-53 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000420 bf9aa936e57711f8fd3b49a2fc39daac 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VEA_003750 5e9bc2be524853b94d8d1f6303095f19 646 Gene3D G3DSA:1.10.287.130 433 486 1.4E-40 T 13-10-2018 VEA_003750 5e9bc2be524853b94d8d1f6303095f19 646 Pfam PF00027 Cyclic nucleotide-binding domain 202 289 2.4E-14 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain VEA_003750 5e9bc2be524853b94d8d1f6303095f19 646 SUPERFAMILY SSF55874 482 639 1.17E-34 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_003750 5e9bc2be524853b94d8d1f6303095f19 646 SUPERFAMILY SSF47384 335 376 7.85E-7 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEA_003750 5e9bc2be524853b94d8d1f6303095f19 646 Gene3D G3DSA:3.30.565.10 487 638 1.4E-40 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_003750 5e9bc2be524853b94d8d1f6303095f19 646 Gene3D G3DSA:3.40.50.2300 2 141 1.1E-7 T 13-10-2018 VEA_003750 5e9bc2be524853b94d8d1f6303095f19 646 SUPERFAMILY SSF52172 3 140 4.81E-7 T 13-10-2018 IPR011006 CheY-like superfamily VEA_003750 5e9bc2be524853b94d8d1f6303095f19 646 Gene3D G3DSA:1.10.287.130 319 417 9.7E-17 T 13-10-2018 VEA_003750 5e9bc2be524853b94d8d1f6303095f19 646 SMART SM00387 528 641 4.0E-28 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_003750 5e9bc2be524853b94d8d1f6303095f19 646 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 530 638 1.8E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_003750 5e9bc2be524853b94d8d1f6303095f19 646 Pfam PF00512 His Kinase A (phospho-acceptor) domain 340 367 8.5E-7 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_003750 5e9bc2be524853b94d8d1f6303095f19 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 569 583 3.4E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_003750 5e9bc2be524853b94d8d1f6303095f19 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 625 638 3.4E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_003750 5e9bc2be524853b94d8d1f6303095f19 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 601 619 3.4E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_003750 5e9bc2be524853b94d8d1f6303095f19 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 587 597 3.4E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_003750 5e9bc2be524853b94d8d1f6303095f19 646 Gene3D G3DSA:2.60.120.10 146 318 1.2E-18 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VEA_003750 5e9bc2be524853b94d8d1f6303095f19 646 SUPERFAMILY SSF51206 202 311 5.63E-19 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like VEA_003712 5d64ed3a46070fb51c436b111e038078 105 Gene3D G3DSA:3.30.110.70 1 105 7.6E-33 T 13-10-2018 VEA_003712 5d64ed3a46070fb51c436b111e038078 105 Pfam PF01906 Putative heavy-metal-binding 1 103 2.0E-38 T 13-10-2018 IPR002765 Uncharacterised protein family UPF0145 VEA_003712 5d64ed3a46070fb51c436b111e038078 105 SUPERFAMILY SSF117782 1 104 3.66E-37 T 13-10-2018 IPR035439 UPF0145 domain superfamily VEA_003712 5d64ed3a46070fb51c436b111e038078 105 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 103 25.65 T 13-10-2018 IPR002765 Uncharacterised protein family UPF0145 VEA_003545 29aa72f64e4dec12533f9426c1a8ab07 526 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 33 520 3.5E-169 T 13-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VEA_003545 29aa72f64e4dec12533f9426c1a8ab07 526 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 74 521 1.5E-133 T 13-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VEA_003545 29aa72f64e4dec12533f9426c1a8ab07 526 ProSitePatterns PS01303 BCCT family of transporters signature. 336 345 - T 13-10-2018 IPR018093 BCCT transporter, conserved site VEA_002428 e259c77c8ad656f8ba0d6313d11bdba4 502 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 9.7E-34 T 13-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VEA_002428 e259c77c8ad656f8ba0d6313d11bdba4 502 SUPERFAMILY SSF52949 1 184 6.47E-52 T 13-10-2018 VEA_002428 e259c77c8ad656f8ba0d6313d11bdba4 502 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 187 489 3.5E-123 T 13-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VEA_002428 e259c77c8ad656f8ba0d6313d11bdba4 502 Gene3D G3DSA:3.40.220.10 1 159 3.1E-59 T 13-10-2018 VEA_002428 e259c77c8ad656f8ba0d6313d11bdba4 502 Gene3D G3DSA:3.40.630.10 181 497 1.6E-140 T 13-10-2018 VEA_002428 e259c77c8ad656f8ba0d6313d11bdba4 502 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 349 356 - T 13-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VEA_002428 e259c77c8ad656f8ba0d6313d11bdba4 502 SUPERFAMILY SSF53187 179 496 3.08E-124 T 13-10-2018 VEA_002428 e259c77c8ad656f8ba0d6313d11bdba4 502 PRINTS PR00481 Cytosol aminopeptidase signature 345 365 4.8E-55 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VEA_002428 e259c77c8ad656f8ba0d6313d11bdba4 502 PRINTS PR00481 Cytosol aminopeptidase signature 286 307 4.8E-55 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VEA_002428 e259c77c8ad656f8ba0d6313d11bdba4 502 PRINTS PR00481 Cytosol aminopeptidase signature 323 344 4.8E-55 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VEA_002428 e259c77c8ad656f8ba0d6313d11bdba4 502 PRINTS PR00481 Cytosol aminopeptidase signature 264 281 4.8E-55 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VEA_002428 e259c77c8ad656f8ba0d6313d11bdba4 502 PRINTS PR00481 Cytosol aminopeptidase signature 373 388 4.8E-55 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VEA_002428 e259c77c8ad656f8ba0d6313d11bdba4 502 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 497 40.74 T 13-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 VEA_004289 bebe89e965dedccd15bc2ffb19b9cea6 382 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 376 43.079 T 13-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 VEA_004289 bebe89e965dedccd15bc2ffb19b9cea6 382 Gene3D G3DSA:2.10.230.10 142 212 1.4E-25 T 13-10-2018 VEA_004289 bebe89e965dedccd15bc2ffb19b9cea6 382 SUPERFAMILY SSF49493 117 259 2.09E-19 T 13-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 VEA_004289 bebe89e965dedccd15bc2ffb19b9cea6 382 SUPERFAMILY SSF49493 262 347 7.85E-23 T 13-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 VEA_004289 bebe89e965dedccd15bc2ffb19b9cea6 382 Pfam PF01556 DnaJ C terminal domain 124 336 1.1E-45 T 13-10-2018 IPR002939 Chaperone DnaJ, C-terminal VEA_004289 bebe89e965dedccd15bc2ffb19b9cea6 382 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 13-10-2018 IPR018253 DnaJ domain, conserved site VEA_004289 bebe89e965dedccd15bc2ffb19b9cea6 382 Pfam PF00684 DnaJ central domain 150 210 3.3E-15 T 13-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 VEA_004289 bebe89e965dedccd15bc2ffb19b9cea6 382 SMART SM00271 4 62 9.4E-32 T 13-10-2018 IPR001623 DnaJ domain VEA_004289 bebe89e965dedccd15bc2ffb19b9cea6 382 Gene3D G3DSA:1.10.287.110 1 117 4.7E-37 T 13-10-2018 IPR036869 Chaperone J-domain superfamily VEA_004289 bebe89e965dedccd15bc2ffb19b9cea6 382 PRINTS PR00625 DnaJ domain signature 62 81 1.4E-32 T 13-10-2018 IPR001623 DnaJ domain VEA_004289 bebe89e965dedccd15bc2ffb19b9cea6 382 PRINTS PR00625 DnaJ domain signature 25 40 1.4E-32 T 13-10-2018 IPR001623 DnaJ domain VEA_004289 bebe89e965dedccd15bc2ffb19b9cea6 382 PRINTS PR00625 DnaJ domain signature 42 62 1.4E-32 T 13-10-2018 IPR001623 DnaJ domain VEA_004289 bebe89e965dedccd15bc2ffb19b9cea6 382 PRINTS PR00625 DnaJ domain signature 7 25 1.4E-32 T 13-10-2018 IPR001623 DnaJ domain VEA_004289 bebe89e965dedccd15bc2ffb19b9cea6 382 Pfam PF00226 DnaJ domain 5 67 2.2E-27 T 13-10-2018 IPR001623 DnaJ domain VEA_004289 bebe89e965dedccd15bc2ffb19b9cea6 382 Gene3D G3DSA:2.60.260.20 258 366 8.3E-29 T 13-10-2018 VEA_004289 bebe89e965dedccd15bc2ffb19b9cea6 382 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 352 7.5E-141 T 13-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 VEA_004289 bebe89e965dedccd15bc2ffb19b9cea6 382 SUPERFAMILY SSF46565 1 114 1.57E-36 T 13-10-2018 IPR036869 Chaperone J-domain superfamily VEA_004289 bebe89e965dedccd15bc2ffb19b9cea6 382 SUPERFAMILY SSF57938 137 213 1.96E-23 T 13-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily VEA_000930 21dda6fc974a674726abad5fc2b731d9 279 Gene3D G3DSA:3.40.50.1820 3 278 1.9E-94 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_000930 21dda6fc974a674726abad5fc2b731d9 279 SUPERFAMILY SSF53474 3 277 1.22E-88 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_000930 21dda6fc974a674726abad5fc2b731d9 279 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 5 277 8.2E-124 T 13-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 VEA_000930 21dda6fc974a674726abad5fc2b731d9 279 Pfam PF00756 Putative esterase 23 271 2.9E-60 T 13-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 VEA_002658 6b56f7617e22917f376f0a4e0a9b2951 1032 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 436 450 - T 13-10-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VEA_002658 6b56f7617e22917f376f0a4e0a9b2951 1032 Gene3D G3DSA:2.60.120.260 1 207 1.1E-73 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily VEA_002658 6b56f7617e22917f376f0a4e0a9b2951 1032 Pfam PF00703 Glycosyl hydrolases family 2 209 319 5.5E-17 T 13-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VEA_002658 6b56f7617e22917f376f0a4e0a9b2951 1032 Pfam PF02929 Beta galactosidase small chain 730 998 7.8E-69 T 13-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VEA_002658 6b56f7617e22917f376f0a4e0a9b2951 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 330 344 5.0E-32 T 13-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VEA_002658 6b56f7617e22917f376f0a4e0a9b2951 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 361 379 5.0E-32 T 13-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VEA_002658 6b56f7617e22917f376f0a4e0a9b2951 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 507 522 5.0E-32 T 13-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VEA_002658 6b56f7617e22917f376f0a4e0a9b2951 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 436 451 5.0E-32 T 13-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VEA_002658 6b56f7617e22917f376f0a4e0a9b2951 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 135 150 5.0E-32 T 13-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VEA_002658 6b56f7617e22917f376f0a4e0a9b2951 1032 Gene3D G3DSA:2.60.40.10 602 703 7.0E-15 T 13-10-2018 IPR013783 Immunoglobulin-like fold VEA_002658 6b56f7617e22917f376f0a4e0a9b2951 1032 SUPERFAMILY SSF51445 321 599 9.85E-85 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VEA_002658 6b56f7617e22917f376f0a4e0a9b2951 1032 Gene3D G3DSA:3.20.20.80 320 600 1.0E-101 T 13-10-2018 VEA_002658 6b56f7617e22917f376f0a4e0a9b2951 1032 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 321 605 1.0E-114 T 13-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 VEA_002658 6b56f7617e22917f376f0a4e0a9b2951 1032 SUPERFAMILY SSF49303 209 319 8.43E-24 T 13-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily VEA_002658 6b56f7617e22917f376f0a4e0a9b2951 1032 SUPERFAMILY SSF74650 715 1001 5.76E-86 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VEA_002658 6b56f7617e22917f376f0a4e0a9b2951 1032 SMART SM01038 728 999 1.1E-123 T 13-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VEA_002658 6b56f7617e22917f376f0a4e0a9b2951 1032 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 371 396 - T 13-10-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VEA_002658 6b56f7617e22917f376f0a4e0a9b2951 1032 Gene3D G3DSA:2.70.98.10 733 1004 6.9E-81 T 13-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 VEA_002658 6b56f7617e22917f376f0a4e0a9b2951 1032 Gene3D G3DSA:2.60.40.10 208 319 1.6E-24 T 13-10-2018 IPR013783 Immunoglobulin-like fold VEA_002658 6b56f7617e22917f376f0a4e0a9b2951 1032 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 44 204 1.3E-47 T 13-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VEA_002658 6b56f7617e22917f376f0a4e0a9b2951 1032 Pfam PF16353 Domain of unknown function(DUF4981) 616 700 1.8E-14 T 13-10-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VEA_002658 6b56f7617e22917f376f0a4e0a9b2951 1032 SUPERFAMILY SSF49785 2 206 6.52E-62 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily VEA_002658 6b56f7617e22917f376f0a4e0a9b2951 1032 SUPERFAMILY SSF49303 613 706 9.25E-21 T 13-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily VEA_004121 5c660edbee015898a699fa9529f510a3 180 SUPERFAMILY SSF47598 1 35 4.67E-14 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 VEA_004121 5c660edbee015898a699fa9529f510a3 180 Gene3D G3DSA:1.10.1220.10 1 41 1.2E-24 T 13-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 VEA_004121 5c660edbee015898a699fa9529f510a3 180 Pfam PF17206 SeqA protein N-terminal domain 1 36 1.4E-24 T 13-10-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal VEA_004121 5c660edbee015898a699fa9529f510a3 180 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 180 42.653 T 13-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 VEA_004121 5c660edbee015898a699fa9529f510a3 180 PIRSF PIRSF019401 1 180 2.1E-55 T 13-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 VEA_004121 5c660edbee015898a699fa9529f510a3 180 Gene3D G3DSA:1.20.1380.10 65 180 1.1E-48 T 13-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 VEA_004121 5c660edbee015898a699fa9529f510a3 180 SUPERFAMILY SSF82808 67 179 2.09E-49 T 13-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 VEA_004121 5c660edbee015898a699fa9529f510a3 180 Pfam PF03925 SeqA protein C-terminal domain 71 178 1.2E-46 T 13-10-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 VEA_004280 b3fd6aad9464c7c0e561d3ad70645e36 1297 SUPERFAMILY SSF52317 1037 1295 5.78E-98 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VEA_004280 b3fd6aad9464c7c0e561d3ad70645e36 1297 Pfam PF02769 AIR synthase related protein, C-terminal domain 835 966 1.8E-14 T 13-10-2018 IPR010918 PurM-like, C-terminal domain VEA_004280 b3fd6aad9464c7c0e561d3ad70645e36 1297 Pfam PF02769 AIR synthase related protein, C-terminal domain 432 589 1.3E-28 T 13-10-2018 IPR010918 PurM-like, C-terminal domain VEA_004280 b3fd6aad9464c7c0e561d3ad70645e36 1297 Gene3D G3DSA:3.30.1330.10 214 419 2.8E-41 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VEA_004280 b3fd6aad9464c7c0e561d3ad70645e36 1297 SUPERFAMILY SSF55326 619 816 4.19E-69 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VEA_004280 b3fd6aad9464c7c0e561d3ad70645e36 1297 Gene3D G3DSA:3.90.650.10 808 982 4.9E-32 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VEA_004280 b3fd6aad9464c7c0e561d3ad70645e36 1297 Gene3D G3DSA:1.10.8.750 153 213 7.2E-28 T 13-10-2018 VEA_004280 b3fd6aad9464c7c0e561d3ad70645e36 1297 SUPERFAMILY SSF56042 432 615 3.44E-54 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VEA_004280 b3fd6aad9464c7c0e561d3ad70645e36 1297 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1041 1294 2.2E-105 T 13-10-2018 VEA_004280 b3fd6aad9464c7c0e561d3ad70645e36 1297 SUPERFAMILY SSF56042 824 1035 4.78E-55 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VEA_004280 b3fd6aad9464c7c0e561d3ad70645e36 1297 SUPERFAMILY SSF82697 1 150 7.85E-50 T 13-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VEA_004280 b3fd6aad9464c7c0e561d3ad70645e36 1297 SMART SM01211 1041 1296 3.3E-157 T 13-10-2018 VEA_004280 b3fd6aad9464c7c0e561d3ad70645e36 1297 SUPERFAMILY SSF55326 221 428 1.19E-65 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VEA_004280 b3fd6aad9464c7c0e561d3ad70645e36 1297 Gene3D G3DSA:3.40.50.880 983 1297 2.1E-139 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VEA_004280 b3fd6aad9464c7c0e561d3ad70645e36 1297 SUPERFAMILY SSF109736 155 220 1.19E-21 T 13-10-2018 VEA_004280 b3fd6aad9464c7c0e561d3ad70645e36 1297 Gene3D G3DSA:3.30.1330.10 614 807 3.9E-26 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VEA_004280 b3fd6aad9464c7c0e561d3ad70645e36 1297 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1295 0.0 T 13-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VEA_004280 b3fd6aad9464c7c0e561d3ad70645e36 1297 Gene3D G3DSA:3.90.650.10 420 606 8.1E-60 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VEA_004280 b3fd6aad9464c7c0e561d3ad70645e36 1297 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1297 21.38 T 13-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VEA_002710 2ffa4f8d439b6b066f330204fe031a91 210 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 3 207 2.9E-109 T 13-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 VEA_002710 2ffa4f8d439b6b066f330204fe031a91 210 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 195 2.0E-62 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VEA_002710 2ffa4f8d439b6b066f330204fe031a91 210 PIRSF PIRSF006102 3 210 6.4E-73 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VEA_002710 2ffa4f8d439b6b066f330204fe031a91 210 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 36.836 T 13-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 VEA_004173 ab9dabd4ef0c0f2716fa4da5b75a89bb 131 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 129 6.0E-28 T 13-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 VEA_004173 ab9dabd4ef0c0f2716fa4da5b75a89bb 131 PIRSF PIRSF002889 1 131 1.0E-31 T 13-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 VEA_004082 adc0c2f7db9ec21b03acc4c3caf01ec4 371 Pfam PF07670 Nucleoside recognition 59 154 1.4E-6 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VEA_004082 adc0c2f7db9ec21b03acc4c3caf01ec4 371 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 161 368 3.6E-72 T 13-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 VEA_004082 adc0c2f7db9ec21b03acc4c3caf01ec4 371 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 1 50 8.7E-14 T 13-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 VEA_000975 f88710cae931676ff7d8363440d7eb61 342 SMART SM00387 242 340 5.3E-5 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_000975 f88710cae931676ff7d8363440d7eb61 342 SUPERFAMILY SSF55874 211 338 2.62E-15 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_000975 f88710cae931676ff7d8363440d7eb61 342 Pfam PF06580 Histidine kinase 149 226 2.1E-24 T 13-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 VEA_000975 f88710cae931676ff7d8363440d7eb61 342 Gene3D G3DSA:3.30.565.10 209 342 5.3E-18 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_000975 f88710cae931676ff7d8363440d7eb61 342 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 247 338 2.0E-6 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_000273 2e9682d8a2d491e475195d8030516048 104 SUPERFAMILY SSF103481 6 102 2.35E-18 T 13-10-2018 VEA_000273 2e9682d8a2d491e475195d8030516048 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 3.9E-26 T 13-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 VEA_000273 2e9682d8a2d491e475195d8030516048 104 Gene3D G3DSA:1.10.3730.20 1 104 1.7E-30 T 13-10-2018 VEA_001715 5c53547b6982e0d2641e96da1c188da0 159 Pfam PF11075 Protein of unknown function VcgC/VcgE (DUF2780) 22 152 2.0E-32 T 13-10-2018 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE VEA_004130 46b361b5eb8ab139c03aa6fcdf541401 404 ProSitePatterns PS01125 ROK family signature. 217 244 - T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VEA_004130 46b361b5eb8ab139c03aa6fcdf541401 404 Gene3D G3DSA:1.10.10.10 3 79 3.9E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_004130 46b361b5eb8ab139c03aa6fcdf541401 404 Pfam PF00480 ROK family 86 390 1.0E-74 T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VEA_004130 46b361b5eb8ab139c03aa6fcdf541401 404 SUPERFAMILY SSF53067 85 391 1.13E-55 T 13-10-2018 VEA_004130 46b361b5eb8ab139c03aa6fcdf541401 404 Gene3D G3DSA:3.30.420.40 90 384 1.3E-93 T 13-10-2018 VEA_004130 46b361b5eb8ab139c03aa6fcdf541401 404 Gene3D G3DSA:3.30.420.40 207 376 1.3E-93 T 13-10-2018 VEA_004130 46b361b5eb8ab139c03aa6fcdf541401 404 SUPERFAMILY SSF46785 11 75 6.18E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_001989 d96c6e711c185d5372e71b28c4946887 391 Pfam PF02803 Thiolase, C-terminal domain 266 390 1.9E-49 T 13-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 VEA_001989 d96c6e711c185d5372e71b28c4946887 391 SUPERFAMILY SSF53901 4 263 2.6E-78 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VEA_001989 d96c6e711c185d5372e71b28c4946887 391 Gene3D G3DSA:3.40.47.10 8 271 2.1E-151 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VEA_001989 d96c6e711c185d5372e71b28c4946887 391 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 7 391 2.4E-241 T 13-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 VEA_001989 d96c6e711c185d5372e71b28c4946887 391 SUPERFAMILY SSF53901 266 390 4.12E-44 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VEA_001989 d96c6e711c185d5372e71b28c4946887 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 13-10-2018 IPR020610 Thiolase, active site GO:0016747 VEA_001989 d96c6e711c185d5372e71b28c4946887 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 389 1.6E-142 T 13-10-2018 IPR002155 Thiolase GO:0016747 VEA_001989 d96c6e711c185d5372e71b28c4946887 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 13-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 VEA_001989 d96c6e711c185d5372e71b28c4946887 391 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 13-10-2018 IPR020613 Thiolase, conserved site GO:0016747 VEA_001989 d96c6e711c185d5372e71b28c4946887 391 Pfam PF00108 Thiolase, N-terminal domain 8 258 8.2E-84 T 13-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 VEA_001989 d96c6e711c185d5372e71b28c4946887 391 Gene3D G3DSA:3.40.47.10 138 385 2.1E-151 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VEA_001989 d96c6e711c185d5372e71b28c4946887 391 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 5 391 60.412 T 13-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 VEA_001989 d96c6e711c185d5372e71b28c4946887 391 PIRSF PIRSF000429 2 391 1.0E-133 T 13-10-2018 IPR002155 Thiolase GO:0016747 VEA_002331 8119ac30024f4200aec770111699e036 223 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 9.5E-101 T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VEA_002331 8119ac30024f4200aec770111699e036 223 Gene3D G3DSA:3.20.20.70 5 221 1.5E-87 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_002331 8119ac30024f4200aec770111699e036 223 SUPERFAMILY SSF51366 4 217 1.84E-78 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VEA_002331 8119ac30024f4200aec770111699e036 223 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VEA_002331 8119ac30024f4200aec770111699e036 223 PIRSF PIRSF001461 1 223 7.8E-107 T 13-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VEA_002331 8119ac30024f4200aec770111699e036 223 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 1.8E-92 T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VEA_002331 8119ac30024f4200aec770111699e036 223 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VEA_002499 5acf8c85ad05d5d01f4b60bd384461ac 243 Pfam PF11967 Recombination protein O N terminal 10 81 2.9E-24 T 13-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal VEA_002499 5acf8c85ad05d5d01f4b60bd384461ac 243 SUPERFAMILY SSF50249 10 80 1.2E-15 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_002499 5acf8c85ad05d5d01f4b60bd384461ac 243 Gene3D G3DSA:1.20.1440.120 84 242 6.9E-53 T 13-10-2018 VEA_002499 5acf8c85ad05d5d01f4b60bd384461ac 243 SUPERFAMILY SSF57863 91 169 2.54E-12 T 13-10-2018 IPR037278 ARFGAP/RecO-like zinc finger VEA_002499 5acf8c85ad05d5d01f4b60bd384461ac 243 TIGRFAM TIGR00613 reco: DNA repair protein RecO 11 234 9.2E-42 T 13-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 VEA_002499 5acf8c85ad05d5d01f4b60bd384461ac 243 Hamap MF_00201 DNA repair protein RecO [recO]. 6 235 23.342 T 13-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 VEA_002499 5acf8c85ad05d5d01f4b60bd384461ac 243 Gene3D G3DSA:2.40.50.140 6 83 7.1E-34 T 13-10-2018 VEA_002499 5acf8c85ad05d5d01f4b60bd384461ac 243 Pfam PF02565 Recombination protein O C terminal 88 230 1.3E-23 T 13-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 VEA_002244 0547205256a76cd491df965d0d6fab41 345 PIRSF PIRSF000114 10 344 1.2E-95 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VEA_002244 0547205256a76cd491df965d0d6fab41 345 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 200 221 - T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VEA_002244 0547205256a76cd491df965d0d6fab41 345 Gene3D G3DSA:1.10.1040.10 201 345 6.0E-54 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VEA_002244 0547205256a76cd491df965d0d6fab41 345 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 14 334 37.057 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VEA_002244 0547205256a76cd491df965d0d6fab41 345 SUPERFAMILY SSF51735 16 190 1.83E-49 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_002244 0547205256a76cd491df965d0d6fab41 345 SUPERFAMILY SSF48179 191 343 2.27E-56 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VEA_002244 0547205256a76cd491df965d0d6fab41 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 68 95 6.6E-43 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VEA_002244 0547205256a76cd491df965d0d6fab41 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 18 35 6.6E-43 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VEA_002244 0547205256a76cd491df965d0d6fab41 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 185 209 6.6E-43 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VEA_002244 0547205256a76cd491df965d0d6fab41 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 250 267 6.6E-43 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VEA_002244 0547205256a76cd491df965d0d6fab41 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 144 164 6.6E-43 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VEA_002244 0547205256a76cd491df965d0d6fab41 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 210 234 6.6E-43 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VEA_002244 0547205256a76cd491df965d0d6fab41 345 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 16 170 1.8E-45 T 13-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VEA_002244 0547205256a76cd491df965d0d6fab41 345 Gene3D G3DSA:3.40.50.720 2 199 4.7E-51 T 13-10-2018 VEA_002244 0547205256a76cd491df965d0d6fab41 345 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 192 329 1.4E-52 T 13-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VEA_002022 bcf542c75dfaca77421afeb098548dde 293 SMART SM00470 40 130 6.1E-35 T 13-10-2018 IPR003115 ParB/Sulfiredoxin VEA_002022 bcf542c75dfaca77421afeb098548dde 293 Gene3D G3DSA:1.10.10.2830 117 230 3.6E-34 T 13-10-2018 VEA_002022 bcf542c75dfaca77421afeb098548dde 293 Gene3D G3DSA:3.90.1530.30 53 116 2.7E-26 T 13-10-2018 VEA_002022 bcf542c75dfaca77421afeb098548dde 293 Pfam PF02195 ParB-like nuclease domain 43 130 2.3E-28 T 13-10-2018 IPR003115 ParB/Sulfiredoxin VEA_002022 bcf542c75dfaca77421afeb098548dde 293 SUPERFAMILY SSF110849 41 132 1.65E-27 T 13-10-2018 IPR036086 ParB/Sulfiredoxin superfamily VEA_002022 bcf542c75dfaca77421afeb098548dde 293 SUPERFAMILY SSF109709 122 229 4.71E-33 T 13-10-2018 VEA_002022 bcf542c75dfaca77421afeb098548dde 293 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 39 214 2.5E-57 T 13-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 VEA_003979 78c467ef35be23bd361a5965cf44bc4e 221 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 8 205 7.3E-10 T 13-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 VEA_000424 752584e74e08b538d2fb7d956710c957 367 SUPERFAMILY SSF53474 54 363 2.5E-45 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_000424 752584e74e08b538d2fb7d956710c957 367 Gene3D G3DSA:1.10.10.800 204 295 7.1E-117 T 13-10-2018 VEA_000424 752584e74e08b538d2fb7d956710c957 367 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 77 220 1.4E-9 T 13-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 VEA_000424 752584e74e08b538d2fb7d956710c957 367 Gene3D G3DSA:3.40.50.1820 71 350 7.1E-117 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_001017 e11df987964b1e223aab83c7e4d83ea6 1043 Gene3D G3DSA:3.20.20.220 154 525 6.4E-131 T 13-10-2018 VEA_001017 e11df987964b1e223aab83c7e4d83ea6 1043 Gene3D G3DSA:3.40.605.10 549 1034 4.3E-147 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VEA_001017 e11df987964b1e223aab83c7e4d83ea6 1043 SUPERFAMILY SSF51730 190 532 6.28E-116 T 13-10-2018 IPR029041 FAD-linked oxidoreductase-like VEA_001017 e11df987964b1e223aab83c7e4d83ea6 1043 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 73 187 2.2E-45 T 13-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 VEA_001017 e11df987964b1e223aab83c7e4d83ea6 1043 Pfam PF00171 Aldehyde dehydrogenase family 585 1034 1.0E-118 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VEA_001017 e11df987964b1e223aab83c7e4d83ea6 1043 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 525 1034 8.2E-243 T 13-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 VEA_001017 e11df987964b1e223aab83c7e4d83ea6 1043 PIRSF PIRSF000197 3 1042 0.0 T 13-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 VEA_001017 e11df987964b1e223aab83c7e4d83ea6 1043 Gene3D G3DSA:3.40.309.10 813 1005 4.3E-147 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VEA_001017 e11df987964b1e223aab83c7e4d83ea6 1043 SUPERFAMILY SSF81935 17 188 1.31E-63 T 13-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 VEA_001017 e11df987964b1e223aab83c7e4d83ea6 1043 SUPERFAMILY SSF53720 558 1034 6.68E-126 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VEA_001017 e11df987964b1e223aab83c7e4d83ea6 1043 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 838 849 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VEA_001017 e11df987964b1e223aab83c7e4d83ea6 1043 Pfam PF01619 Proline dehydrogenase 197 490 2.7E-93 T 13-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 VEA_002611 083dd17f5aefe8650b0b44ef8198bd49 317 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 218 4.7E-86 T 13-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEA_002611 083dd17f5aefe8650b0b44ef8198bd49 317 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 247 2.6E-24 T 13-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 VEA_002611 083dd17f5aefe8650b0b44ef8198bd49 317 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 308 18.994 T 13-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEA_002611 083dd17f5aefe8650b0b44ef8198bd49 317 SUPERFAMILY SSF55120 9 247 1.44E-83 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEA_002611 083dd17f5aefe8650b0b44ef8198bd49 317 Gene3D G3DSA:2.30.130.10 249 312 2.9E-23 T 13-10-2018 IPR036974 PUA domain superfamily GO:0003723 VEA_002611 083dd17f5aefe8650b0b44ef8198bd49 317 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 179 8.8E-57 T 13-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 VEA_002611 083dd17f5aefe8650b0b44ef8198bd49 317 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 251 308 5.0E-19 T 13-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEA_002611 083dd17f5aefe8650b0b44ef8198bd49 317 SUPERFAMILY SSF88697 250 310 1.09E-14 T 13-10-2018 IPR015947 PUA-like superfamily VEA_002611 083dd17f5aefe8650b0b44ef8198bd49 317 Gene3D G3DSA:3.30.2350.10 1 248 9.2E-95 T 13-10-2018 VEA_003618 a32c58fd751f64e7c21b7bb93a11635a 475 SUPERFAMILY SSF47384 242 323 2.55E-16 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEA_003618 a32c58fd751f64e7c21b7bb93a11635a 475 SMART SM00387 367 474 8.3E-25 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_003618 a32c58fd751f64e7c21b7bb93a11635a 475 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 367 473 1.1E-19 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_003618 a32c58fd751f64e7c21b7bb93a11635a 475 SMART SM00388 259 324 5.0E-14 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_003618 a32c58fd751f64e7c21b7bb93a11635a 475 Gene3D G3DSA:1.10.287.130 210 322 5.3E-19 T 13-10-2018 VEA_003618 a32c58fd751f64e7c21b7bb93a11635a 475 SUPERFAMILY SSF55874 314 474 3.8E-33 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_003618 a32c58fd751f64e7c21b7bb93a11635a 475 Pfam PF08521 Two-component sensor kinase N-terminal 27 182 1.3E-6 T 13-10-2018 IPR013727 Two-component sensor kinase, N-terminal VEA_003618 a32c58fd751f64e7c21b7bb93a11635a 475 Pfam PF00512 His Kinase A (phospho-acceptor) domain 261 323 1.5E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_003618 a32c58fd751f64e7c21b7bb93a11635a 475 Gene3D G3DSA:3.30.565.10 323 474 2.4E-32 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_003618 a32c58fd751f64e7c21b7bb93a11635a 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 454 2.8E-7 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_003618 a32c58fd751f64e7c21b7bb93a11635a 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 432 2.8E-7 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_003618 a32c58fd751f64e7c21b7bb93a11635a 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 418 2.8E-7 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_001418 9f9c288ca01d5650c2c41f6c517619dd 111 Gene3D G3DSA:1.10.260.40 5 67 4.6E-11 T 13-10-2018 VEA_001418 9f9c288ca01d5650c2c41f6c517619dd 111 SMART SM00530 9 64 8.3E-8 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VEA_001418 9f9c288ca01d5650c2c41f6c517619dd 111 Pfam PF13560 Helix-turn-helix domain 11 61 4.3E-10 T 13-10-2018 VEA_001418 9f9c288ca01d5650c2c41f6c517619dd 111 SUPERFAMILY SSF47413 6 61 8.16E-11 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEA_003734 c1fa38684bb804da768af84e6fa92406 557 SUPERFAMILY SSF56300 136 532 3.16E-31 T 13-10-2018 VEA_003734 c1fa38684bb804da768af84e6fa92406 557 Pfam PF09423 PhoD-like phosphatase 136 528 8.2E-117 T 13-10-2018 IPR018946 Alkaline phosphatase D-related VEA_003734 c1fa38684bb804da768af84e6fa92406 557 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 38 125 4.2E-29 T 13-10-2018 IPR032093 Phospholipase D, N-terminal VEA_003734 c1fa38684bb804da768af84e6fa92406 557 Gene3D G3DSA:2.60.40.380 29 127 2.7E-32 T 13-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 VEA_003734 c1fa38684bb804da768af84e6fa92406 557 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 26 4.3E-4 T 13-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VEA_000387 2d2217dd6bc0aa1a35a5a2dec2c55dd9 457 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 437 7.9E-164 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 VEA_000387 2d2217dd6bc0aa1a35a5a2dec2c55dd9 457 PIRSF PIRSF006446 2 455 1.5E-215 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 VEA_000302 0d3f80f9f6eb6518a76eaf6d0b4cecf0 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 2.1E-17 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000302 0d3f80f9f6eb6518a76eaf6d0b4cecf0 301 SUPERFAMILY SSF53850 88 293 6.15E-35 T 13-10-2018 VEA_000302 0d3f80f9f6eb6518a76eaf6d0b4cecf0 301 SUPERFAMILY SSF46785 3 79 5.44E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000302 0d3f80f9f6eb6518a76eaf6d0b4cecf0 301 Gene3D G3DSA:3.40.190.10 88 292 1.2E-47 T 13-10-2018 VEA_000302 0d3f80f9f6eb6518a76eaf6d0b4cecf0 301 Gene3D G3DSA:3.40.190.10 169 267 1.2E-47 T 13-10-2018 VEA_000302 0d3f80f9f6eb6518a76eaf6d0b4cecf0 301 Pfam PF03466 LysR substrate binding domain 95 295 4.0E-21 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_000302 0d3f80f9f6eb6518a76eaf6d0b4cecf0 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.2E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000302 0d3f80f9f6eb6518a76eaf6d0b4cecf0 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.2E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000302 0d3f80f9f6eb6518a76eaf6d0b4cecf0 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.2E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000302 0d3f80f9f6eb6518a76eaf6d0b4cecf0 301 Gene3D G3DSA:1.10.10.10 1 86 3.4E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001282 46d2fd1332be39b5c19f06e0fca7b9a2 309 SUPERFAMILY SSF53807 42 302 9.03E-56 T 13-10-2018 VEA_001282 46d2fd1332be39b5c19f06e0fca7b9a2 309 Pfam PF01497 Periplasmic binding protein 47 276 8.9E-22 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain VEA_001282 46d2fd1332be39b5c19f06e0fca7b9a2 309 Gene3D G3DSA:3.40.50.1980 133 304 2.8E-47 T 13-10-2018 VEA_001282 46d2fd1332be39b5c19f06e0fca7b9a2 309 Gene3D G3DSA:3.40.50.1980 33 131 6.3E-28 T 13-10-2018 VEA_001282 46d2fd1332be39b5c19f06e0fca7b9a2 309 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 64 82 5.9E-6 T 13-10-2018 VEA_001282 46d2fd1332be39b5c19f06e0fca7b9a2 309 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 283 296 5.9E-6 T 13-10-2018 VEA_001282 46d2fd1332be39b5c19f06e0fca7b9a2 309 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 95 110 5.9E-6 T 13-10-2018 VEA_002614 239c9f2e5ded355988a81e057c82167a 306 SUPERFAMILY SSF48452 34 286 1.87E-68 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_002614 239c9f2e5ded355988a81e057c82167a 306 Gene3D G3DSA:1.25.40.10 26 296 2.0E-80 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_002614 239c9f2e5ded355988a81e057c82167a 306 SMART SM00028 66 99 0.45 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_002614 239c9f2e5ded355988a81e057c82167a 306 SMART SM00028 134 167 110.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_002614 239c9f2e5ded355988a81e057c82167a 306 SMART SM00028 238 271 120.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_002614 239c9f2e5ded355988a81e057c82167a 306 SMART SM00028 100 133 0.0087 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_002614 239c9f2e5ded355988a81e057c82167a 306 PIRSF PIRSF004654 1 296 1.7E-91 T 13-10-2018 IPR023605 Lipoprotein NlpI VEA_004143 7bdfc336010d69e4b68b15933e46721b 135 SMART SM00116 83 130 1.9E-5 T 13-10-2018 IPR000644 CBS domain VEA_004143 7bdfc336010d69e4b68b15933e46721b 135 SMART SM00116 16 65 11.0 T 13-10-2018 IPR000644 CBS domain VEA_004143 7bdfc336010d69e4b68b15933e46721b 135 Pfam PF00571 CBS domain 78 125 2.0E-10 T 13-10-2018 IPR000644 CBS domain VEA_004143 7bdfc336010d69e4b68b15933e46721b 135 Gene3D G3DSA:3.10.580.10 1 134 5.0E-27 T 13-10-2018 VEA_004143 7bdfc336010d69e4b68b15933e46721b 135 SUPERFAMILY SSF54631 7 126 1.89E-24 T 13-10-2018 VEA_002214 e17ae70592f0e80c079ce6be5b4e71ed 483 ProSitePatterns PS00163 Fumarate lyases signature. 330 339 - T 13-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 VEA_002214 e17ae70592f0e80c079ce6be5b4e71ed 483 Pfam PF10415 Fumarase C C-terminus 421 473 4.2E-18 T 13-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VEA_002214 e17ae70592f0e80c079ce6be5b4e71ed 483 PRINTS PR00149 Fumarate lyase superfamily signature 284 311 7.0E-26 T 13-10-2018 IPR000362 Fumarate lyase family VEA_002214 e17ae70592f0e80c079ce6be5b4e71ed 483 PRINTS PR00149 Fumarate lyase superfamily signature 193 211 7.0E-26 T 13-10-2018 IPR000362 Fumarate lyase family VEA_002214 e17ae70592f0e80c079ce6be5b4e71ed 483 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 7.0E-26 T 13-10-2018 IPR000362 Fumarate lyase family VEA_002214 e17ae70592f0e80c079ce6be5b4e71ed 483 PRINTS PR00149 Fumarate lyase superfamily signature 330 346 7.0E-26 T 13-10-2018 IPR000362 Fumarate lyase family VEA_002214 e17ae70592f0e80c079ce6be5b4e71ed 483 Gene3D G3DSA:1.10.40.30 421 470 1.1E-28 T 13-10-2018 VEA_002214 e17ae70592f0e80c079ce6be5b4e71ed 483 SUPERFAMILY SSF48557 14 467 2.65E-145 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 VEA_002214 e17ae70592f0e80c079ce6be5b4e71ed 483 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 16 482 2.9E-252 T 13-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 VEA_002214 e17ae70592f0e80c079ce6be5b4e71ed 483 Gene3D G3DSA:1.20.200.10 153 420 9.3E-113 T 13-10-2018 VEA_002214 e17ae70592f0e80c079ce6be5b4e71ed 483 Gene3D G3DSA:1.10.275.10 16 152 2.0E-59 T 13-10-2018 IPR024083 Fumarase/histidase, N-terminal VEA_002214 e17ae70592f0e80c079ce6be5b4e71ed 483 Pfam PF00206 Lyase 23 355 7.7E-102 T 13-10-2018 IPR022761 Fumarate lyase, N-terminal VEA_003528 de582571a4c46f10e139740e7ed501b2 106 Pfam PF13466 STAS domain 19 95 3.0E-9 T 13-10-2018 IPR002645 STAS domain VEA_003528 de582571a4c46f10e139740e7ed501b2 106 SUPERFAMILY SSF52091 6 101 9.42E-20 T 13-10-2018 IPR036513 STAS domain superfamily VEA_003528 de582571a4c46f10e139740e7ed501b2 106 Gene3D G3DSA:3.30.750.24 2 105 1.8E-17 T 13-10-2018 IPR036513 STAS domain superfamily VEA_000542 8dc080f465211423b09c820a32851ba0 104 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 1 92 7.0E-45 T 13-10-2018 IPR007458 Protein of unknown function DUF496 VEA_000542 8dc080f465211423b09c820a32851ba0 104 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 1 95 23.937 T 13-10-2018 IPR007458 Protein of unknown function DUF496 VEA_000542 8dc080f465211423b09c820a32851ba0 104 PIRSF PIRSF028773 1 104 1.4E-45 T 13-10-2018 IPR007458 Protein of unknown function DUF496 VEA_000542 8dc080f465211423b09c820a32851ba0 104 Pfam PF04363 Protein of unknown function (DUF496) 1 92 7.1E-42 T 13-10-2018 IPR007458 Protein of unknown function DUF496 VEA_000530 0848b655451003dd4ac2e277e20922ed 151 SMART SM00344 1 110 2.1E-45 T 13-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VEA_000530 0848b655451003dd4ac2e277e20922ed 151 SUPERFAMILY SSF46785 1 60 6.51E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000530 0848b655451003dd4ac2e277e20922ed 151 Gene3D G3DSA:1.10.10.10 1 52 5.4E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000530 0848b655451003dd4ac2e277e20922ed 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 2.1E-16 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEA_000530 0848b655451003dd4ac2e277e20922ed 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 2.1E-16 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEA_000530 0848b655451003dd4ac2e277e20922ed 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 2.1E-16 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEA_000530 0848b655451003dd4ac2e277e20922ed 151 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 13-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VEA_000530 0848b655451003dd4ac2e277e20922ed 151 SUPERFAMILY SSF54909 63 149 1.47E-21 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel VEA_000530 0848b655451003dd4ac2e277e20922ed 151 Gene3D G3DSA:3.30.70.920 53 146 1.4E-23 T 13-10-2018 VEA_000530 0848b655451003dd4ac2e277e20922ed 151 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 47 1.5E-18 T 13-10-2018 VEA_000530 0848b655451003dd4ac2e277e20922ed 151 Pfam PF01037 Lrp/AsnC ligand binding domain 67 140 6.0E-22 T 13-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VEA_000945 07ea422a906a0061494a088660ef3d61 848 SUPERFAMILY SSF49299 596 689 1.26E-6 T 13-10-2018 IPR035986 PKD domain superfamily VEA_000945 07ea422a906a0061494a088660ef3d61 848 Gene3D G3DSA:2.60.40.10 22 132 7.0E-45 T 13-10-2018 IPR013783 Immunoglobulin-like fold VEA_000945 07ea422a906a0061494a088660ef3d61 848 SUPERFAMILY SSF54556 461 546 6.87E-17 T 13-10-2018 IPR029070 Chitinase insertion domain superfamily VEA_000945 07ea422a906a0061494a088660ef3d61 848 SMART SM00495 797 842 4.1E-15 T 13-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VEA_000945 07ea422a906a0061494a088660ef3d61 848 Gene3D G3DSA:3.10.50.10 466 551 1.3E-174 T 13-10-2018 IPR029070 Chitinase insertion domain superfamily VEA_000945 07ea422a906a0061494a088660ef3d61 848 SUPERFAMILY SSF51445 135 588 9.07E-91 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VEA_000945 07ea422a906a0061494a088660ef3d61 848 ProSitePatterns PS01095 Chitinases family 18 active site. 307 315 - T 13-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VEA_000945 07ea422a906a0061494a088660ef3d61 848 SMART SM00636 159 575 1.5E-159 T 13-10-2018 IPR011583 Chitinase II GO:0008061 VEA_000945 07ea422a906a0061494a088660ef3d61 848 Pfam PF02839 Carbohydrate binding domain 814 839 3.2E-5 T 13-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VEA_000945 07ea422a906a0061494a088660ef3d61 848 Pfam PF08329 Chitinase A, N-terminal domain 21 156 6.4E-55 T 13-10-2018 IPR013540 Chitinase A N-terminal GO:0004568|GO:0006032 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VEA_000945 07ea422a906a0061494a088660ef3d61 848 Gene3D G3DSA:2.60.40.10 693 785 2.9E-11 T 13-10-2018 IPR013783 Immunoglobulin-like fold VEA_000945 07ea422a906a0061494a088660ef3d61 848 Gene3D G3DSA:2.10.10.20 796 840 1.9E-18 T 13-10-2018 VEA_000945 07ea422a906a0061494a088660ef3d61 848 SMART SM00089 701 787 1.2 T 13-10-2018 IPR022409 PKD/Chitinase domain VEA_000945 07ea422a906a0061494a088660ef3d61 848 SMART SM00089 62 134 1.5 T 13-10-2018 IPR022409 PKD/Chitinase domain VEA_000945 07ea422a906a0061494a088660ef3d61 848 SMART SM00089 600 690 0.0086 T 13-10-2018 IPR022409 PKD/Chitinase domain VEA_000945 07ea422a906a0061494a088660ef3d61 848 Gene3D G3DSA:2.60.40.10 597 692 1.1E-21 T 13-10-2018 IPR013783 Immunoglobulin-like fold VEA_000945 07ea422a906a0061494a088660ef3d61 848 SUPERFAMILY SSF81296 21 133 2.38E-32 T 13-10-2018 IPR014756 Immunoglobulin E-set VEA_000945 07ea422a906a0061494a088660ef3d61 848 Gene3D G3DSA:3.20.20.80 162 577 1.3E-174 T 13-10-2018 VEA_000945 07ea422a906a0061494a088660ef3d61 848 Pfam PF00704 Glycosyl hydrolases family 18 162 575 4.8E-87 T 13-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 VEA_000945 07ea422a906a0061494a088660ef3d61 848 SUPERFAMILY SSF51055 783 843 4.51E-15 T 13-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VEA_001851 79259f75e3c1311acea0976573149bcb 285 SMART SM00382 35 244 1.4E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_001851 79259f75e3c1311acea0976573149bcb 285 SUPERFAMILY SSF52540 6 257 6.66E-68 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001851 79259f75e3c1311acea0976573149bcb 285 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 275 3.8E-6 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VEA_001851 79259f75e3c1311acea0976573149bcb 285 Pfam PF00005 ABC transporter 26 186 1.1E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_001851 79259f75e3c1311acea0976573149bcb 285 Gene3D G3DSA:3.40.50.300 4 282 2.2E-88 T 13-10-2018 VEA_001851 79259f75e3c1311acea0976573149bcb 285 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_000619 e75c0b8d702893396d225ad5a33ee117 522 SUPERFAMILY SSF52540 73 359 1.24E-74 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000619 e75c0b8d702893396d225ad5a33ee117 522 Gene3D G3DSA:3.40.50.300 1 209 1.2E-76 T 13-10-2018 VEA_000619 e75c0b8d702893396d225ad5a33ee117 522 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VEA_000619 e75c0b8d702893396d225ad5a33ee117 522 Gene3D G3DSA:3.40.50.300 214 406 1.1E-45 T 13-10-2018 VEA_000619 e75c0b8d702893396d225ad5a33ee117 522 SMART SM00487 20 221 1.4E-63 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEA_000619 e75c0b8d702893396d225ad5a33ee117 522 Pfam PF00270 DEAD/DEAH box helicase 26 194 1.3E-48 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VEA_000619 e75c0b8d702893396d225ad5a33ee117 522 Pfam PF00271 Helicase conserved C-terminal domain 232 338 2.0E-26 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_000619 e75c0b8d702893396d225ad5a33ee117 522 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 499 51.015 T 13-10-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 VEA_000619 e75c0b8d702893396d225ad5a33ee117 522 SMART SM00490 257 338 6.7E-32 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_002801 ecddd81d98f2a8aac58816bdc9ab0d63 123 Pfam PF11169 Protein of unknown function (DUF2956) 18 119 4.7E-43 T 13-10-2018 IPR021339 Protein of unknown function DUF2956 VEA_002681 716ac448d2b41c60425c47eb8d30bec9 308 Pfam PF03466 LysR substrate binding domain 90 294 4.3E-50 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_002681 716ac448d2b41c60425c47eb8d30bec9 308 SUPERFAMILY SSF53850 92 296 3.39E-44 T 13-10-2018 VEA_002681 716ac448d2b41c60425c47eb8d30bec9 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 3.2E-14 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_002681 716ac448d2b41c60425c47eb8d30bec9 308 Gene3D G3DSA:1.10.10.10 4 93 3.9E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_002681 716ac448d2b41c60425c47eb8d30bec9 308 SUPERFAMILY SSF46785 5 114 4.77E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_002681 716ac448d2b41c60425c47eb8d30bec9 308 Gene3D G3DSA:3.40.190.290 94 296 3.0E-37 T 13-10-2018 VEA_000551 d2f42d652b68aed55233a14f5c2514b7 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 5.7E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000551 d2f42d652b68aed55233a14f5c2514b7 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 5.7E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000551 d2f42d652b68aed55233a14f5c2514b7 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 5.7E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000551 d2f42d652b68aed55233a14f5c2514b7 304 Pfam PF03466 LysR substrate binding domain 92 296 1.7E-25 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_000551 d2f42d652b68aed55233a14f5c2514b7 304 Gene3D G3DSA:3.40.190.10 168 267 1.2E-48 T 13-10-2018 VEA_000551 d2f42d652b68aed55233a14f5c2514b7 304 Gene3D G3DSA:1.10.10.10 1 86 3.4E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000551 d2f42d652b68aed55233a14f5c2514b7 304 Gene3D G3DSA:3.40.190.10 94 291 1.2E-48 T 13-10-2018 VEA_000551 d2f42d652b68aed55233a14f5c2514b7 304 SUPERFAMILY SSF46785 2 84 9.85E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000551 d2f42d652b68aed55233a14f5c2514b7 304 SUPERFAMILY SSF53850 88 294 8.87E-39 T 13-10-2018 VEA_000551 d2f42d652b68aed55233a14f5c2514b7 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 4.0E-17 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_002458 63082fc36e061c63491365b2f4107322 346 SUPERFAMILY SSF52540 5 334 3.33E-74 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002458 63082fc36e061c63491365b2f4107322 346 Gene3D G3DSA:3.30.450.90 1 100 1.3E-36 T 13-10-2018 VEA_002458 63082fc36e061c63491365b2f4107322 346 Gene3D G3DSA:3.40.50.300 101 344 3.4E-102 T 13-10-2018 VEA_002458 63082fc36e061c63491365b2f4107322 346 SMART SM00382 122 247 0.0059 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_002458 63082fc36e061c63491365b2f4107322 346 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 13-10-2018 IPR001482 Type II/IV secretion system protein VEA_002458 63082fc36e061c63491365b2f4107322 346 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 333 4.5E-152 T 13-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 VEA_002458 63082fc36e061c63491365b2f4107322 346 Pfam PF00437 Type II/IV secretion system protein 12 270 2.9E-47 T 13-10-2018 IPR001482 Type II/IV secretion system protein VEA_000762 851fb1fe8d135a01ca0e9acf2bf09caf 302 Pfam PF00892 EamA-like transporter family 152 299 6.1E-7 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEA_000762 851fb1fe8d135a01ca0e9acf2bf09caf 302 TIGRFAM TIGR03340 phn_DUF6: phosphonate utilization associated putative membrane protein 4 297 2.1E-98 T 13-10-2018 IPR017725 Phosphonate utilization associated transmembrane protein, putative VEA_000762 851fb1fe8d135a01ca0e9acf2bf09caf 302 SUPERFAMILY SSF103481 44 139 4.97E-6 T 13-10-2018 VEA_000762 851fb1fe8d135a01ca0e9acf2bf09caf 302 SUPERFAMILY SSF103481 200 298 2.35E-6 T 13-10-2018 VEA_003997 7b43d48832247d085d475dd51c0b181f 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 4.2E-13 T 13-10-2018 VEA_003997 7b43d48832247d085d475dd51c0b181f 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 4.2E-13 T 13-10-2018 VEA_003997 7b43d48832247d085d475dd51c0b181f 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 167 185 4.2E-13 T 13-10-2018 VEA_003997 7b43d48832247d085d475dd51c0b181f 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 4.2E-13 T 13-10-2018 VEA_003997 7b43d48832247d085d475dd51c0b181f 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 4.2E-7 T 13-10-2018 VEA_003997 7b43d48832247d085d475dd51c0b181f 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 167 192 4.2E-7 T 13-10-2018 VEA_003997 7b43d48832247d085d475dd51c0b181f 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 4.2E-7 T 13-10-2018 VEA_003997 7b43d48832247d085d475dd51c0b181f 429 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 333 2.1E-62 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VEA_003997 7b43d48832247d085d475dd51c0b181f 429 SUPERFAMILY SSF51905 3 347 1.83E-28 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_003997 7b43d48832247d085d475dd51c0b181f 429 Gene3D G3DSA:3.50.50.100 1 409 3.3E-114 T 13-10-2018 VEA_004200 8eb785e971d13faed9ef48f1ab702c83 269 Pfam PF13369 Transglutaminase-like superfamily 33 184 1.6E-44 T 13-10-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 VEA_004200 8eb785e971d13faed9ef48f1ab702c83 269 Pfam PF13371 Tetratricopeptide repeat 187 259 5.1E-24 T 13-10-2018 VEA_000738 50746d07d81a851e0fd49c49d702b2a4 227 Gene3D G3DSA:2.30.30.910 100 222 2.3E-16 T 13-10-2018 VEA_000738 50746d07d81a851e0fd49c49d702b2a4 227 Pfam PF13860 FlgD Ig-like domain 114 182 1.3E-8 T 13-10-2018 IPR025965 FlgD Ig-like domain VEA_000738 50746d07d81a851e0fd49c49d702b2a4 227 Pfam PF03963 Flagellar hook capping protein - N-terminal region 16 85 3.1E-17 T 13-10-2018 IPR005648 Flagellar hook capping protein VEA_000738 50746d07d81a851e0fd49c49d702b2a4 227 Gene3D G3DSA:2.60.40.4070 111 190 2.3E-16 T 13-10-2018 VEA_000738 50746d07d81a851e0fd49c49d702b2a4 227 Pfam PF13861 FlgD Tudor-like domain 94 223 4.9E-11 T 13-10-2018 IPR025963 FlgD Tudor-like domain VEA_000658 edca88c873f75600f074091314ee9e7a 802 SUPERFAMILY SSF49303 193 284 2.85E-14 T 13-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily VEA_000658 edca88c873f75600f074091314ee9e7a 802 SUPERFAMILY SSF51445 283 631 3.59E-100 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VEA_000658 edca88c873f75600f074091314ee9e7a 802 Gene3D G3DSA:2.60.120.260 4 190 2.2E-48 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily VEA_000658 edca88c873f75600f074091314ee9e7a 802 SUPERFAMILY SSF49785 3 188 1.11E-48 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily VEA_000658 edca88c873f75600f074091314ee9e7a 802 SUPERFAMILY SSF49303 732 802 7.19E-9 T 13-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily VEA_000658 edca88c873f75600f074091314ee9e7a 802 Gene3D G3DSA:2.60.40.10 196 284 3.5E-9 T 13-10-2018 IPR013783 Immunoglobulin-like fold VEA_000658 edca88c873f75600f074091314ee9e7a 802 Gene3D G3DSA:3.20.20.80 285 629 2.8E-120 T 13-10-2018 VEA_004287 42bb2673188adc7ff77ffaadad213ef8 168 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 25 2.7E-8 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEA_004287 42bb2673188adc7ff77ffaadad213ef8 168 Pfam PF12019 Type II transport protein GspH 41 148 3.3E-7 T 13-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 VEA_004287 42bb2673188adc7ff77ffaadad213ef8 168 PIRSF PIRSF024622 1 168 2.0E-58 T 13-10-2018 IPR016824 Tfp pilus assembly protein FimT VEA_004287 42bb2673188adc7ff77ffaadad213ef8 168 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 24 1.6E-6 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEA_004287 42bb2673188adc7ff77ffaadad213ef8 168 SUPERFAMILY SSF54523 5 93 1.26E-13 T 13-10-2018 VEA_004287 42bb2673188adc7ff77ffaadad213ef8 168 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 3 23 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEA_004287 42bb2673188adc7ff77ffaadad213ef8 168 Gene3D G3DSA:3.30.700.10 5 168 3.1E-9 T 13-10-2018 VEA_001287 d8aa49345f8b2f1a2d4d4394a2395c90 232 SMART SM00448 3 113 1.9E-35 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_001287 d8aa49345f8b2f1a2d4d4394a2395c90 232 SUPERFAMILY SSF46894 147 224 2.04E-17 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEA_001287 d8aa49345f8b2f1a2d4d4394a2395c90 232 Pfam PF00072 Response regulator receiver domain 5 114 8.5E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_001287 d8aa49345f8b2f1a2d4d4394a2395c90 232 SUPERFAMILY SSF52172 3 164 6.26E-36 T 13-10-2018 IPR011006 CheY-like superfamily VEA_001287 d8aa49345f8b2f1a2d4d4394a2395c90 232 Gene3D G3DSA:3.40.50.2300 1 123 8.9E-33 T 13-10-2018 VEA_001287 d8aa49345f8b2f1a2d4d4394a2395c90 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 224 8.1E-18 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEA_001287 d8aa49345f8b2f1a2d4d4394a2395c90 232 Gene3D G3DSA:1.10.10.10 124 232 1.3E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001287 d8aa49345f8b2f1a2d4d4394a2395c90 232 SMART SM00862 148 224 2.7E-16 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEA_003420 cae4d3cdd44e241e236b82dd782d8ad0 160 Gene3D G3DSA:3.30.70.860 95 160 4.5E-31 T 13-10-2018 IPR035571 UPF0234-like, C-terminal VEA_003420 cae4d3cdd44e241e236b82dd782d8ad0 160 SUPERFAMILY SSF89963 88 160 7.85E-29 T 13-10-2018 IPR036183 YajQ-like superfamily VEA_003420 cae4d3cdd44e241e236b82dd782d8ad0 160 SUPERFAMILY SSF89963 2 84 6.41E-31 T 13-10-2018 IPR036183 YajQ-like superfamily VEA_003420 cae4d3cdd44e241e236b82dd782d8ad0 160 Gene3D G3DSA:3.30.70.990 9 94 8.1E-27 T 13-10-2018 IPR035570 UPF0234, N-terminal VEA_003420 cae4d3cdd44e241e236b82dd782d8ad0 160 Pfam PF04461 Protein of unknown function (DUF520) 2 159 6.0E-65 T 13-10-2018 IPR007551 Protein of unknown function DUF520 VEA_003420 cae4d3cdd44e241e236b82dd782d8ad0 160 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 160 29.543 T 13-10-2018 IPR007551 Protein of unknown function DUF520 VEA_002588 802fe9c9ea5992f7f374af4e39505078 341 Pfam PF05175 Methyltransferase small domain 172 336 3.2E-61 T 13-10-2018 IPR007848 Methyltransferase small domain GO:0008168 VEA_002588 802fe9c9ea5992f7f374af4e39505078 341 SUPERFAMILY SSF53335 153 330 1.24E-26 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_002588 802fe9c9ea5992f7f374af4e39505078 341 Gene3D G3DSA:3.40.50.150 1 157 2.6E-49 T 13-10-2018 VEA_002588 802fe9c9ea5992f7f374af4e39505078 341 Gene3D G3DSA:3.40.50.150 158 341 4.3E-41 T 13-10-2018 VEA_002588 802fe9c9ea5992f7f374af4e39505078 341 Pfam PF08468 Methyltransferase small domain N-terminal 8 163 6.1E-57 T 13-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 VEA_002588 802fe9c9ea5992f7f374af4e39505078 341 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 269 275 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VEA_002588 802fe9c9ea5992f7f374af4e39505078 341 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 340 46.287 T 13-10-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 VEA_001265 b6d628e155c6c4d73563e13d48ad781d 249 SMART SM00382 28 220 1.2E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_001265 b6d628e155c6c4d73563e13d48ad781d 249 SUPERFAMILY SSF52540 4 236 1.47E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001265 b6d628e155c6c4d73563e13d48ad781d 249 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_001265 b6d628e155c6c4d73563e13d48ad781d 249 Gene3D G3DSA:3.40.50.300 4 246 3.0E-62 T 13-10-2018 VEA_001265 b6d628e155c6c4d73563e13d48ad781d 249 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 4 249 1.8E-126 T 13-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 VEA_001265 b6d628e155c6c4d73563e13d48ad781d 249 Pfam PF00005 ABC transporter 19 174 8.8E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_000394 313bbce70d9822c3f8cc7a2ff1bf22e7 567 Gene3D G3DSA:3.40.50.1220 187 350 1.9E-33 T 13-10-2018 VEA_000394 313bbce70d9822c3f8cc7a2ff1bf22e7 567 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 390 535 2.4E-40 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VEA_000394 313bbce70d9822c3f8cc7a2ff1bf22e7 567 TIGRFAM TIGR02418 acolac_catab: acetolactate synthase, catabolic 10 547 4.2E-263 T 13-10-2018 IPR012782 Acetolactate synthase, catabolic GO:0000287|GO:0003984|GO:0030976|GO:0034077 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 VEA_000394 313bbce70d9822c3f8cc7a2ff1bf22e7 567 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 194 327 9.5E-26 T 13-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 VEA_000394 313bbce70d9822c3f8cc7a2ff1bf22e7 567 SUPERFAMILY SSF52467 188 341 2.34E-32 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VEA_000394 313bbce70d9822c3f8cc7a2ff1bf22e7 567 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 427 446 - T 13-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 VEA_000394 313bbce70d9822c3f8cc7a2ff1bf22e7 567 SUPERFAMILY SSF52518 367 554 3.54E-51 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VEA_000394 313bbce70d9822c3f8cc7a2ff1bf22e7 567 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 175 1.6E-49 T 13-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VEA_000394 313bbce70d9822c3f8cc7a2ff1bf22e7 567 Gene3D G3DSA:3.40.50.970 362 554 1.6E-55 T 13-10-2018 VEA_000394 313bbce70d9822c3f8cc7a2ff1bf22e7 567 Gene3D G3DSA:3.40.50.970 2 181 1.9E-63 T 13-10-2018 VEA_000394 313bbce70d9822c3f8cc7a2ff1bf22e7 567 SUPERFAMILY SSF52518 8 182 5.89E-47 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VEA_001102 1954d86d8e66e2f83b84b3d89e4eeed7 902 SUPERFAMILY SSF46894 831 894 9.52E-17 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEA_001102 1954d86d8e66e2f83b84b3d89e4eeed7 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 869 881 1.3E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_001102 1954d86d8e66e2f83b84b3d89e4eeed7 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 853 869 1.3E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_001102 1954d86d8e66e2f83b84b3d89e4eeed7 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 839 853 1.3E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_001102 1954d86d8e66e2f83b84b3d89e4eeed7 902 SUPERFAMILY SSF52540 14 230 2.74E-11 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001102 1954d86d8e66e2f83b84b3d89e4eeed7 902 Gene3D G3DSA:3.40.50.300 12 165 4.6E-7 T 13-10-2018 VEA_001102 1954d86d8e66e2f83b84b3d89e4eeed7 902 Gene3D G3DSA:1.10.10.10 829 900 8.3E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001102 1954d86d8e66e2f83b84b3d89e4eeed7 902 Pfam PF00196 Bacterial regulatory proteins, luxR family 838 893 1.3E-19 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_001102 1954d86d8e66e2f83b84b3d89e4eeed7 902 Hamap MF_01247 HTH-type transcriptional regulator MalT [malT]. 1 902 38.752 T 13-10-2018 IPR023768 Transcriptional regulator HTH-type, MalT VEA_001102 1954d86d8e66e2f83b84b3d89e4eeed7 902 SMART SM00421 836 893 5.8E-20 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_001102 1954d86d8e66e2f83b84b3d89e4eeed7 902 SUPERFAMILY SSF48452 442 805 4.5E-157 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_001102 1954d86d8e66e2f83b84b3d89e4eeed7 902 ProSitePatterns PS00622 LuxR-type HTH domain signature. 853 880 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_001102 1954d86d8e66e2f83b84b3d89e4eeed7 902 Gene3D G3DSA:1.25.40.10 444 811 2.4E-83 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_001751 4b557141dadda05f4aa25d831462e08e 169 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 1.1E-67 T 13-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 VEA_001751 4b557141dadda05f4aa25d831462e08e 169 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 47.519 T 13-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 VEA_001751 4b557141dadda05f4aa25d831462e08e 169 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 160 1.4E-81 T 13-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 VEA_001751 4b557141dadda05f4aa25d831462e08e 169 Gene3D G3DSA:3.50.30.40 1 161 2.2E-60 T 13-10-2018 VEA_001751 4b557141dadda05f4aa25d831462e08e 169 SUPERFAMILY SSF89562 2 158 7.85E-47 T 13-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily VEA_001751 4b557141dadda05f4aa25d831462e08e 169 Pfam PF03737 Aldolase/RraA 6 152 5.9E-39 T 13-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VEA_004142 697fe01556e06559038aef6305a20762 181 Gene3D G3DSA:3.60.21.10 1 181 8.2E-62 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like VEA_004142 697fe01556e06559038aef6305a20762 181 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 2 162 1.1E-22 T 13-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 VEA_004142 697fe01556e06559038aef6305a20762 181 SUPERFAMILY SSF56300 2 165 1.43E-37 T 13-10-2018 VEA_004142 697fe01556e06559038aef6305a20762 181 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 2 168 5.1E-29 T 13-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 VEA_001150 a548214824770cf240c8b2399b04585f 396 Hamap MF_01530 Multidrug resistance protein MdtL [mdtL]. 1 396 41.899 T 13-10-2018 IPR023697 Multidrug resistance protein MdtL GO:0005215|GO:0005886 VEA_001150 a548214824770cf240c8b2399b04585f 396 Pfam PF07690 Major Facilitator Superfamily 10 345 3.7E-40 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEA_001150 a548214824770cf240c8b2399b04585f 396 ProSitePatterns PS00216 Sugar transport proteins signature 1. 58 75 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 VEA_001150 a548214824770cf240c8b2399b04585f 396 Gene3D G3DSA:1.20.1720.10 4 380 5.9E-70 T 13-10-2018 VEA_001150 a548214824770cf240c8b2399b04585f 396 SUPERFAMILY SSF103473 3 387 4.32E-51 T 13-10-2018 IPR036259 MFS transporter superfamily VEA_004324 885279c05555ff8d66b228bb7cdeaa80 581 SUPERFAMILY SSF51556 97 538 6.35E-22 T 13-10-2018 IPR032466 Metal-dependent hydrolase VEA_004324 885279c05555ff8d66b228bb7cdeaa80 581 Pfam PF07969 Amidohydrolase family 86 578 7.4E-130 T 13-10-2018 IPR013108 Amidohydrolase 3 VEA_004324 885279c05555ff8d66b228bb7cdeaa80 581 Gene3D G3DSA:3.10.310.70 116 246 3.0E-133 T 13-10-2018 VEA_004324 885279c05555ff8d66b228bb7cdeaa80 581 Gene3D G3DSA:3.20.20.140 98 537 3.0E-133 T 13-10-2018 VEA_004324 885279c05555ff8d66b228bb7cdeaa80 581 SUPERFAMILY SSF51338 36 578 1.9E-14 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VEA_004324 885279c05555ff8d66b228bb7cdeaa80 581 Gene3D G3DSA:2.30.40.10 44 555 3.0E-133 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VEA_003736 e6766675cbb62db5b09045e208d04bdc 795 Pfam PF04408 Helicase associated domain (HA2) 386 450 9.8E-6 T 13-10-2018 IPR007502 Helicase-associated domain GO:0004386 VEA_003736 e6766675cbb62db5b09045e208d04bdc 795 Gene3D G3DSA:3.40.50.300 8 174 2.6E-43 T 13-10-2018 VEA_003736 e6766675cbb62db5b09045e208d04bdc 795 SMART SM00487 6 185 3.3E-15 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEA_003736 e6766675cbb62db5b09045e208d04bdc 795 Gene3D G3DSA:1.20.120.1080 366 466 1.1E-7 T 13-10-2018 VEA_003736 e6766675cbb62db5b09045e208d04bdc 795 Pfam PF00270 DEAD/DEAH box helicase 27 163 3.6E-9 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VEA_003736 e6766675cbb62db5b09045e208d04bdc 795 SUPERFAMILY SSF52540 29 337 2.29E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003736 e6766675cbb62db5b09045e208d04bdc 795 SMART SM00490 230 326 1.0E-15 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_003736 e6766675cbb62db5b09045e208d04bdc 795 Pfam PF00271 Helicase conserved C-terminal domain 208 325 5.2E-16 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_003736 e6766675cbb62db5b09045e208d04bdc 795 Gene3D G3DSA:3.40.50.300 179 342 5.9E-45 T 13-10-2018 VEA_001674 62b1007068a5c4e848eb1279cce23099 323 Pfam PF00348 Polyprenyl synthetase 32 270 2.6E-72 T 13-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 VEA_001674 62b1007068a5c4e848eb1279cce23099 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site VEA_001674 62b1007068a5c4e848eb1279cce23099 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site VEA_001674 62b1007068a5c4e848eb1279cce23099 323 SUPERFAMILY SSF48576 4 322 1.02E-97 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily VEA_001674 62b1007068a5c4e848eb1279cce23099 323 Gene3D G3DSA:1.10.600.10 1 323 1.2E-118 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily VEA_002396 4b1c120b7e1662891f9f6aafc1b0ee6a 175 Pfam PF04751 Protein of unknown function (DUF615) 18 168 9.7E-56 T 13-10-2018 IPR006839 Ribosome-associated, YjgA VEA_002396 4b1c120b7e1662891f9f6aafc1b0ee6a 175 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 10 172 22.976 T 13-10-2018 IPR006839 Ribosome-associated, YjgA VEA_002396 4b1c120b7e1662891f9f6aafc1b0ee6a 175 PIRSF PIRSF016183 1 174 7.5E-72 T 13-10-2018 IPR006839 Ribosome-associated, YjgA VEA_002396 4b1c120b7e1662891f9f6aafc1b0ee6a 175 Gene3D G3DSA:1.10.60.30 28 102 2.7E-26 T 13-10-2018 VEA_002396 4b1c120b7e1662891f9f6aafc1b0ee6a 175 Gene3D G3DSA:1.10.60.30 104 174 1.3E-24 T 13-10-2018 VEA_002396 4b1c120b7e1662891f9f6aafc1b0ee6a 175 SUPERFAMILY SSF158710 28 170 5.75E-52 T 13-10-2018 IPR023153 PSPTO4464-like domain superfamily VEA_003963 a5eff19bae6351e083f2510d2653b997 691 SUPERFAMILY SSF52540 14 666 5.09E-16 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003963 a5eff19bae6351e083f2510d2653b997 691 Pfam PF13307 Helicase C-terminal domain 526 684 5.4E-37 T 13-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VEA_003963 a5eff19bae6351e083f2510d2653b997 691 SMART SM00491 535 671 9.7E-28 T 13-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VEA_003963 a5eff19bae6351e083f2510d2653b997 691 SUPERFAMILY SSF52540 243 666 1.9E-6 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003963 a5eff19bae6351e083f2510d2653b997 691 Pfam PF04851 Type III restriction enzyme, res subunit 24 254 1.5E-5 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VEA_003963 a5eff19bae6351e083f2510d2653b997 691 Gene3D G3DSA:3.40.50.300 25 304 1.3E-40 T 13-10-2018 VEA_003963 a5eff19bae6351e083f2510d2653b997 691 Gene3D G3DSA:3.40.50.300 499 689 6.7E-34 T 13-10-2018 VEA_003963 a5eff19bae6351e083f2510d2653b997 691 Hamap MF_02205 ATP-dependent DNA helicase DinG [dinG]. 33 690 36.738 T 13-10-2018 IPR039000 ATP-dependent DNA helicase DinG GO:0004003 VEA_004248 6a34b373d45e37a2b2874673ea8a6cc5 260 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 165 258 5.2E-24 T 13-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 VEA_004248 6a34b373d45e37a2b2874673ea8a6cc5 260 Gene3D G3DSA:3.40.50.1010 1 166 9.8E-53 T 13-10-2018 VEA_004248 6a34b373d45e37a2b2874673ea8a6cc5 260 SUPERFAMILY SSF88723 4 164 1.23E-39 T 13-10-2018 IPR029060 PIN-like domain superfamily VEA_004248 6a34b373d45e37a2b2874673ea8a6cc5 260 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 161 2.7E-31 T 13-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 VEA_004248 6a34b373d45e37a2b2874673ea8a6cc5 260 SMART SM00475 3 254 2.5E-71 T 13-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 VEA_004248 6a34b373d45e37a2b2874673ea8a6cc5 260 SMART SM00279 167 202 7.7E-10 T 13-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 VEA_004248 6a34b373d45e37a2b2874673ea8a6cc5 260 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 255 45.952 T 13-10-2018 IPR022895 Flap endonuclease Xni GO:0048256 VEA_004248 6a34b373d45e37a2b2874673ea8a6cc5 260 SUPERFAMILY SSF47807 164 258 3.59E-21 T 13-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily VEA_004248 6a34b373d45e37a2b2874673ea8a6cc5 260 Gene3D G3DSA:1.10.150.20 167 255 1.4E-22 T 13-10-2018 VEA_001466 33c35fa0a3a6ba65fd351aafa37f891f 238 SUPERFAMILY SSF52540 3 224 7.45E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001466 33c35fa0a3a6ba65fd351aafa37f891f 238 Pfam PF00005 ABC transporter 24 172 3.2E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_001466 33c35fa0a3a6ba65fd351aafa37f891f 238 Gene3D G3DSA:3.40.50.300 1 235 9.6E-73 T 13-10-2018 VEA_001466 33c35fa0a3a6ba65fd351aafa37f891f 238 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_001466 33c35fa0a3a6ba65fd351aafa37f891f 238 SMART SM00382 32 220 2.9E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_000303 6e8baf53e69afe9a7c62904efe11373d 141 Gene3D G3DSA:3.40.140.10 1 133 2.4E-41 T 13-10-2018 VEA_000303 6e8baf53e69afe9a7c62904efe11373d 141 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 49 87 - T 13-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VEA_000303 6e8baf53e69afe9a7c62904efe11373d 141 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 99 8.7E-18 T 13-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain VEA_000303 6e8baf53e69afe9a7c62904efe11373d 141 SUPERFAMILY SSF53927 2 137 1.95E-41 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VEA_000451 52c9e86baa99fb86c98db1761817cdb0 543 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 425 434 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VEA_000451 52c9e86baa99fb86c98db1761817cdb0 543 SMART SM00382 231 378 2.6E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_000451 52c9e86baa99fb86c98db1761817cdb0 543 SUPERFAMILY SSF52540 214 450 2.59E-62 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000451 52c9e86baa99fb86c98db1761817cdb0 543 Gene3D G3DSA:1.10.8.60 383 463 7.6E-21 T 13-10-2018 VEA_000451 52c9e86baa99fb86c98db1761817cdb0 543 Pfam PF02954 Bacterial regulatory protein, Fis family 499 537 7.7E-8 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEA_000451 52c9e86baa99fb86c98db1761817cdb0 543 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 503 520 3.6E-5 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEA_000451 52c9e86baa99fb86c98db1761817cdb0 543 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 520 540 3.6E-5 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEA_000451 52c9e86baa99fb86c98db1761817cdb0 543 Gene3D G3DSA:3.40.50.300 196 382 5.4E-61 T 13-10-2018 VEA_000451 52c9e86baa99fb86c98db1761817cdb0 543 Pfam PF00158 Sigma-54 interaction domain 213 377 5.1E-69 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VEA_000451 52c9e86baa99fb86c98db1761817cdb0 543 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 235 248 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VEA_000451 52c9e86baa99fb86c98db1761817cdb0 543 Gene3D G3DSA:1.10.10.60 475 541 1.1E-13 T 13-10-2018 VEA_000451 52c9e86baa99fb86c98db1761817cdb0 543 Gene3D G3DSA:3.30.450.40 4 173 2.8E-15 T 13-10-2018 IPR029016 GAF-like domain superfamily VEA_000451 52c9e86baa99fb86c98db1761817cdb0 543 SUPERFAMILY SSF55781 10 181 3.71E-14 T 13-10-2018 VEA_000451 52c9e86baa99fb86c98db1761817cdb0 543 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 297 312 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VEA_000451 52c9e86baa99fb86c98db1761817cdb0 543 SUPERFAMILY SSF46689 490 540 9.68E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_000451 52c9e86baa99fb86c98db1761817cdb0 543 Pfam PF13185 GAF domain 26 148 2.5E-8 T 13-10-2018 IPR003018 GAF domain GO:0005515 VEA_002438 8f0eaa86d030696538f55f2aa8b9f3b7 440 Pfam PF02056 Family 4 glycosyl hydrolase 7 186 4.8E-63 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VEA_002438 8f0eaa86d030696538f55f2aa8b9f3b7 440 SUPERFAMILY SSF51735 6 170 5.48E-54 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_002438 8f0eaa86d030696538f55f2aa8b9f3b7 440 Gene3D G3DSA:3.40.50.720 1 170 4.3E-67 T 13-10-2018 VEA_002438 8f0eaa86d030696538f55f2aa8b9f3b7 440 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 411 1.4E-50 T 13-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 VEA_002438 8f0eaa86d030696538f55f2aa8b9f3b7 440 SUPERFAMILY SSF56327 173 436 9.3E-94 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VEA_002438 8f0eaa86d030696538f55f2aa8b9f3b7 440 Gene3D G3DSA:3.90.110.10 171 439 3.1E-99 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VEA_002438 8f0eaa86d030696538f55f2aa8b9f3b7 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 99 112 7.3E-49 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VEA_002438 8f0eaa86d030696538f55f2aa8b9f3b7 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 7.3E-49 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VEA_002438 8f0eaa86d030696538f55f2aa8b9f3b7 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 78 94 7.3E-49 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VEA_002438 8f0eaa86d030696538f55f2aa8b9f3b7 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 113 133 7.3E-49 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VEA_002438 8f0eaa86d030696538f55f2aa8b9f3b7 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 142 159 7.3E-49 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VEA_002438 8f0eaa86d030696538f55f2aa8b9f3b7 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 7.3E-49 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VEA_002438 8f0eaa86d030696538f55f2aa8b9f3b7 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 7 22 7.3E-49 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VEA_004270 10619e6334445a2437cb94d963a1ed06 415 Hamap MF_01063 Esterase FrsA [frsA]. 4 415 54.204 T 13-10-2018 IPR010520 UPF0255 family VEA_004270 10619e6334445a2437cb94d963a1ed06 415 SUPERFAMILY SSF53474 47 411 4.44E-42 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_004270 10619e6334445a2437cb94d963a1ed06 415 Gene3D G3DSA:3.40.50.1820 18 414 3.1E-110 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_004270 10619e6334445a2437cb94d963a1ed06 415 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 5 414 1.4E-229 T 13-10-2018 IPR010520 UPF0255 family VEA_000589 a19a3787d2af5fdff9774d186869dd31 282 PIRSF PIRSF006232 3 282 2.9E-83 T 13-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 VEA_000589 a19a3787d2af5fdff9774d186869dd31 282 Gene3D G3DSA:2.60.120.10 143 249 1.7E-84 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VEA_000589 a19a3787d2af5fdff9774d186869dd31 282 SUPERFAMILY SSF51182 6 279 1.51E-71 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily VEA_000589 a19a3787d2af5fdff9774d186869dd31 282 Pfam PF02678 Pirin 23 121 2.8E-32 T 13-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 VEA_000589 a19a3787d2af5fdff9774d186869dd31 282 Gene3D G3DSA:2.60.120.10 18 275 1.7E-84 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VEA_000589 a19a3787d2af5fdff9774d186869dd31 282 Pfam PF05726 Pirin C-terminal cupin domain 181 279 3.2E-28 T 13-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 VEA_002814 768918dd33b0fb847324a87145eed1c6 103 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 1 103 16.594 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VEA_002814 768918dd33b0fb847324a87145eed1c6 103 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 16 102 3.1E-19 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VEA_002814 768918dd33b0fb847324a87145eed1c6 103 Pfam PF02049 Flagellar hook-basal body complex protein FliE 18 103 1.0E-28 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VEA_002814 768918dd33b0fb847324a87145eed1c6 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 88 101 3.2E-12 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VEA_002814 768918dd33b0fb847324a87145eed1c6 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 67 83 3.2E-12 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VEA_002814 768918dd33b0fb847324a87145eed1c6 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 32 48 3.2E-12 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VEA_000284 2080b74ae9d29c250f2913be2d4aacc2 453 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 306 451 1.1E-34 T 13-10-2018 IPR000160 GGDEF domain VEA_000284 2080b74ae9d29c250f2913be2d4aacc2 453 SMART SM00267 295 452 5.8E-33 T 13-10-2018 IPR000160 GGDEF domain VEA_000284 2080b74ae9d29c250f2913be2d4aacc2 453 Gene3D G3DSA:3.30.70.270 305 453 6.5E-39 T 13-10-2018 VEA_000284 2080b74ae9d29c250f2913be2d4aacc2 453 SUPERFAMILY SSF55073 310 451 6.75E-34 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_000284 2080b74ae9d29c250f2913be2d4aacc2 453 Pfam PF00990 Diguanylate cyclase, GGDEF domain 306 451 6.2E-34 T 13-10-2018 IPR000160 GGDEF domain VEA_001416 7bb9379759a92a0d48039a00f88bf9a7 244 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 46 197 7.5E-7 T 13-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 VEA_001416 7bb9379759a92a0d48039a00f88bf9a7 244 SUPERFAMILY SSF52540 21 226 2.58E-28 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001416 7bb9379759a92a0d48039a00f88bf9a7 244 Gene3D G3DSA:3.40.50.300 62 242 6.6E-43 T 13-10-2018 VEA_001416 7bb9379759a92a0d48039a00f88bf9a7 244 Gene3D G3DSA:3.40.50.300 19 61 1.2E-5 T 13-10-2018 VEA_002994 fad9619876fc255a8c579a2bad8cfc61 316 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 316 72.587 T 13-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VEA_002994 fad9619876fc255a8c579a2bad8cfc61 316 Gene3D G3DSA:3.40.47.10 1 316 5.6E-128 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VEA_002994 fad9619876fc255a8c579a2bad8cfc61 316 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 7.1E-32 T 13-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VEA_002994 fad9619876fc255a8c579a2bad8cfc61 316 SUPERFAMILY SSF53901 3 315 3.57E-72 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VEA_002994 fad9619876fc255a8c579a2bad8cfc61 316 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 316 6.4E-146 T 13-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VEA_002994 fad9619876fc255a8c579a2bad8cfc61 316 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 227 315 1.1E-34 T 13-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VEA_000892 caf394a63cb5293f367255ef5156e939 304 SUPERFAMILY SSF46785 2 83 1.57E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000892 caf394a63cb5293f367255ef5156e939 304 Gene3D G3DSA:1.10.10.10 1 84 1.7E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000892 caf394a63cb5293f367255ef5156e939 304 Pfam PF03466 LysR substrate binding domain 92 289 2.4E-12 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_000892 caf394a63cb5293f367255ef5156e939 304 SUPERFAMILY SSF53850 87 293 1.16E-23 T 13-10-2018 VEA_000892 caf394a63cb5293f367255ef5156e939 304 Gene3D G3DSA:3.40.190.10 168 266 1.0E-23 T 13-10-2018 VEA_000892 caf394a63cb5293f367255ef5156e939 304 Gene3D G3DSA:3.40.190.10 87 291 1.0E-23 T 13-10-2018 VEA_000892 caf394a63cb5293f367255ef5156e939 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 5.5E-15 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_003798 38d238b34459a88ec3d274b8629a7b21 509 SMART SM00065 21 170 1.6E-8 T 13-10-2018 IPR003018 GAF domain GO:0005515 VEA_003798 38d238b34459a88ec3d274b8629a7b21 509 Gene3D G3DSA:1.10.10.60 448 509 8.5E-10 T 13-10-2018 VEA_003798 38d238b34459a88ec3d274b8629a7b21 509 SUPERFAMILY SSF55781 7 163 6.54E-18 T 13-10-2018 VEA_003798 38d238b34459a88ec3d274b8629a7b21 509 SUPERFAMILY SSF46689 459 507 2.02E-7 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_003798 38d238b34459a88ec3d274b8629a7b21 509 Gene3D G3DSA:3.30.450.40 7 175 6.0E-15 T 13-10-2018 IPR029016 GAF-like domain superfamily VEA_003798 38d238b34459a88ec3d274b8629a7b21 509 SMART SM00382 214 358 3.9E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_003798 38d238b34459a88ec3d274b8629a7b21 509 Pfam PF02954 Bacterial regulatory protein, Fis family 469 500 2.1E-6 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEA_003798 38d238b34459a88ec3d274b8629a7b21 509 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 218 231 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VEA_003798 38d238b34459a88ec3d274b8629a7b21 509 SUPERFAMILY SSF52540 193 437 6.65E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003798 38d238b34459a88ec3d274b8629a7b21 509 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 280 295 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VEA_003798 38d238b34459a88ec3d274b8629a7b21 509 Gene3D G3DSA:1.10.8.60 365 430 1.7E-15 T 13-10-2018 VEA_003798 38d238b34459a88ec3d274b8629a7b21 509 Gene3D G3DSA:3.40.50.300 180 364 5.5E-64 T 13-10-2018 VEA_003798 38d238b34459a88ec3d274b8629a7b21 509 Pfam PF00158 Sigma-54 interaction domain 195 361 2.7E-69 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VEA_000084 592ea533889b65ab3e3e7b485411d93b 364 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 184 1.7E-28 T 13-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VEA_000084 592ea533889b65ab3e3e7b485411d93b 364 SUPERFAMILY SSF53901 7 325 9.31E-66 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VEA_000084 592ea533889b65ab3e3e7b485411d93b 364 Gene3D G3DSA:3.40.47.10 1 362 7.8E-155 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VEA_000084 592ea533889b65ab3e3e7b485411d93b 364 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 4 324 66.664 T 13-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VEA_000084 592ea533889b65ab3e3e7b485411d93b 364 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 5 324 5.3E-111 T 13-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VEA_000084 592ea533889b65ab3e3e7b485411d93b 364 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 235 324 2.5E-37 T 13-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VEA_002481 7d23636548cf6bc394c676adf851e9c4 199 PIRSF PIRSF006806 4 192 4.3E-36 T 13-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase VEA_002481 7d23636548cf6bc394c676adf851e9c4 199 Gene3D G3DSA:3.40.50.10420 3 197 5.7E-56 T 13-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily VEA_002481 7d23636548cf6bc394c676adf851e9c4 199 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 6 189 2.0E-51 T 13-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase VEA_002481 7d23636548cf6bc394c676adf851e9c4 199 SUPERFAMILY SSF100950 5 196 4.05E-58 T 13-10-2018 IPR037171 NagB/RpiA transferase-like VEA_002481 7d23636548cf6bc394c676adf851e9c4 199 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 7 189 2.2E-42 T 13-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase VEA_001548 6359703bad419d4780da07f4f289fc77 261 SUPERFAMILY SSF52096 4 261 5.72E-79 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEA_001548 6359703bad419d4780da07f4f289fc77 261 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 102 122 - T 13-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 VEA_001548 6359703bad419d4780da07f4f289fc77 261 Gene3D G3DSA:3.90.226.10 3 261 1.4E-81 T 13-10-2018 VEA_001548 6359703bad419d4780da07f4f289fc77 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 260 1.2E-58 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 VEA_004169 a5f645f069b9ef46ebe70975f7f20875 249 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 6 226 1.9E-53 T 13-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 VEA_004169 a5f645f069b9ef46ebe70975f7f20875 249 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 3.7E-34 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VEA_004169 a5f645f069b9ef46ebe70975f7f20875 249 SUPERFAMILY SSF117143 77 207 1.15E-16 T 13-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like VEA_004169 a5f645f069b9ef46ebe70975f7f20875 249 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 172 242 7.8E-23 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VEA_004169 a5f645f069b9ef46ebe70975f7f20875 249 Pfam PF00460 Flagella basal body rod protein 8 35 2.0E-5 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VEA_004236 e39b45b496459d26499e01b32656c9e5 315 Gene3D G3DSA:3.40.50.2300 68 303 6.1E-64 T 13-10-2018 VEA_004236 e39b45b496459d26499e01b32656c9e5 315 SUPERFAMILY SSF47413 3 60 1.05E-16 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEA_004236 e39b45b496459d26499e01b32656c9e5 315 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 13-10-2018 VEA_004236 e39b45b496459d26499e01b32656c9e5 315 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 1.3E-19 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEA_004236 e39b45b496459d26499e01b32656c9e5 315 SUPERFAMILY SSF53822 63 306 1.16E-58 T 13-10-2018 IPR028082 Periplasmic binding protein-like I VEA_004236 e39b45b496459d26499e01b32656c9e5 315 Pfam PF13377 Periplasmic binding protein-like domain 168 308 2.3E-16 T 13-10-2018 VEA_004236 e39b45b496459d26499e01b32656c9e5 315 Gene3D G3DSA:1.10.260.40 2 60 1.7E-21 T 13-10-2018 VEA_004236 e39b45b496459d26499e01b32656c9e5 315 SMART SM00354 4 74 2.1E-32 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEA_004236 e39b45b496459d26499e01b32656c9e5 315 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 311 2.1E-139 T 13-10-2018 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 VEA_004236 e39b45b496459d26499e01b32656c9e5 315 Gene3D G3DSA:3.40.50.2300 163 279 6.1E-64 T 13-10-2018 VEA_002351 be1ce3ee13fc0a172543a6fcf253eef0 578 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 15 578 58.53 T 13-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEA_002351 be1ce3ee13fc0a172543a6fcf253eef0 578 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 485 501 - T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEA_002351 be1ce3ee13fc0a172543a6fcf253eef0 578 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 24 566 8.8E-285 T 13-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEA_002351 be1ce3ee13fc0a172543a6fcf253eef0 578 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 359 423 8.5E-14 T 13-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEA_002351 be1ce3ee13fc0a172543a6fcf253eef0 578 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 84 143 1.3E-13 T 13-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEA_002351 be1ce3ee13fc0a172543a6fcf253eef0 578 Gene3D G3DSA:3.90.480.20 21 423 3.4E-82 T 13-10-2018 VEA_002351 be1ce3ee13fc0a172543a6fcf253eef0 578 SUPERFAMILY SSF56014 435 567 3.27E-32 T 13-10-2018 VEA_002351 be1ce3ee13fc0a172543a6fcf253eef0 578 Gene3D G3DSA:3.30.413.10 146 354 3.4E-82 T 13-10-2018 VEA_002351 be1ce3ee13fc0a172543a6fcf253eef0 578 PRINTS PR00397 Sirohaem Fe-binding site signature 485 503 4.7E-9 T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEA_002351 be1ce3ee13fc0a172543a6fcf253eef0 578 PRINTS PR00397 Sirohaem Fe-binding site signature 436 454 4.7E-9 T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEA_002351 be1ce3ee13fc0a172543a6fcf253eef0 578 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 178 336 2.1E-45 T 13-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEA_002351 be1ce3ee13fc0a172543a6fcf253eef0 578 SUPERFAMILY SSF55124 352 430 4.25E-21 T 13-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEA_002351 be1ce3ee13fc0a172543a6fcf253eef0 578 SUPERFAMILY SSF55124 18 150 2.78E-27 T 13-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEA_002351 be1ce3ee13fc0a172543a6fcf253eef0 578 SUPERFAMILY SSF56014 154 350 7.46E-58 T 13-10-2018 VEA_002351 be1ce3ee13fc0a172543a6fcf253eef0 578 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 437 562 1.6E-5 T 13-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEA_002351 be1ce3ee13fc0a172543a6fcf253eef0 578 Gene3D G3DSA:3.30.413.10 432 575 2.2E-35 T 13-10-2018 VEA_004163 4dd8d2a95834f5406c85747d1c23aa7f 397 Gene3D G3DSA:1.20.1330.10 268 372 3.1E-9 T 13-10-2018 VEA_004163 4dd8d2a95834f5406c85747d1c23aa7f 397 Gene3D G3DSA:1.20.1330.10 42 233 1.5E-33 T 13-10-2018 VEA_004163 4dd8d2a95834f5406c85747d1c23aa7f 397 SUPERFAMILY SSF64518 3 397 3.4E-68 T 13-10-2018 VEA_004163 4dd8d2a95834f5406c85747d1c23aa7f 397 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 4 397 1.8E-94 T 13-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 VEA_004163 4dd8d2a95834f5406c85747d1c23aa7f 397 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 2.5E-12 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VEA_003032 05d22e42e539d09b4b6aea3a0cbecbed 1030 SMART SM00926 72 154 2.0E-15 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEA_003032 05d22e42e539d09b4b6aea3a0cbecbed 1030 SUPERFAMILY SSF50692 880 1003 4.07E-22 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VEA_003032 05d22e42e539d09b4b6aea3a0cbecbed 1030 Gene3D G3DSA:3.40.50.740 566 708 1.2E-11 T 13-10-2018 VEA_003032 05d22e42e539d09b4b6aea3a0cbecbed 1030 SUPERFAMILY SSF53706 69 891 8.09E-116 T 13-10-2018 VEA_003032 05d22e42e539d09b4b6aea3a0cbecbed 1030 Pfam PF01568 Molydopterin dinucleotide binding domain 904 997 9.5E-11 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VEA_003032 05d22e42e539d09b4b6aea3a0cbecbed 1030 Gene3D G3DSA:3.40.50.740 157 187 3.1E-5 T 13-10-2018 VEA_003032 05d22e42e539d09b4b6aea3a0cbecbed 1030 Gene3D G3DSA:2.40.40.20 858 1005 5.0E-23 T 13-10-2018 VEA_003032 05d22e42e539d09b4b6aea3a0cbecbed 1030 Pfam PF00384 Molybdopterin oxidoreductase 244 697 6.9E-22 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEA_003917 bb09bf00e43922fc2c889429a287e519 139 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 12 127 1.7E-37 T 13-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 VEA_003917 bb09bf00e43922fc2c889429a287e519 139 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 8 131 2.9E-50 T 13-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 VEA_003917 bb09bf00e43922fc2c889429a287e519 139 Pfam PF03061 Thioesterase superfamily 22 106 1.3E-17 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 VEA_003917 bb09bf00e43922fc2c889429a287e519 139 PIRSF PIRSF003230 2 138 3.0E-47 T 13-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 VEA_003917 bb09bf00e43922fc2c889429a287e519 139 SUPERFAMILY SSF54637 6 132 8.17E-41 T 13-10-2018 IPR029069 HotDog domain superfamily VEA_003917 bb09bf00e43922fc2c889429a287e519 139 Gene3D G3DSA:3.10.129.10 3 137 7.5E-42 T 13-10-2018 VEA_003427 a5e150aaa442d75087a880ba14222668 416 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 9 402 5.0E-105 T 13-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type VEA_003427 a5e150aaa442d75087a880ba14222668 416 Pfam PF04403 Paraquat-inducible protein A 248 403 3.7E-47 T 13-10-2018 IPR007498 Intermembrane transport protein PqiA-like VEA_003427 a5e150aaa442d75087a880ba14222668 416 Pfam PF04403 Paraquat-inducible protein A 54 205 7.3E-37 T 13-10-2018 IPR007498 Intermembrane transport protein PqiA-like VEA_000110 a47676eeba227fde609e975c75c92b9c 285 SMART SM00342 191 274 9.3E-28 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_000110 a47676eeba227fde609e975c75c92b9c 285 Pfam PF12833 Helix-turn-helix domain 198 275 2.4E-18 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_000110 a47676eeba227fde609e975c75c92b9c 285 SUPERFAMILY SSF46689 227 278 4.48E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_000110 a47676eeba227fde609e975c75c92b9c 285 Gene3D G3DSA:1.10.10.60 170 279 3.7E-26 T 13-10-2018 VEA_000110 a47676eeba227fde609e975c75c92b9c 285 Gene3D G3DSA:2.60.120.280 30 140 4.0E-8 T 13-10-2018 VEA_000110 a47676eeba227fde609e975c75c92b9c 285 SUPERFAMILY SSF46689 174 225 2.29E-6 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_000110 a47676eeba227fde609e975c75c92b9c 285 Pfam PF02311 AraC-like ligand binding domain 33 117 1.3E-6 T 13-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VEA_000110 a47676eeba227fde609e975c75c92b9c 285 SUPERFAMILY SSF51215 27 162 1.57E-18 T 13-10-2018 IPR037923 Transcription regulator HTH-like VEA_001207 d9b6a752a5fb0ac597f631c7b270a924 171 SUPERFAMILY SSF49329 24 171 4.84E-50 T 13-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 VEA_001207 d9b6a752a5fb0ac597f631c7b270a924 171 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 159 170 - T 13-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 VEA_001207 d9b6a752a5fb0ac597f631c7b270a924 171 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 33 170 4.6E-31 T 13-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 VEA_001207 d9b6a752a5fb0ac597f631c7b270a924 171 Gene3D G3DSA:2.60.40.200 20 171 1.7E-46 T 13-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 VEA_001207 d9b6a752a5fb0ac597f631c7b270a924 171 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 63 73 - T 13-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 VEA_002338 67946e9ec7f77302d909b1fc75783481 361 PRINTS PR00992 Alanine racemase signature 342 355 2.0E-71 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEA_002338 67946e9ec7f77302d909b1fc75783481 361 PRINTS PR00992 Alanine racemase signature 290 307 2.0E-71 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEA_002338 67946e9ec7f77302d909b1fc75783481 361 PRINTS PR00992 Alanine racemase signature 158 169 2.0E-71 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEA_002338 67946e9ec7f77302d909b1fc75783481 361 PRINTS PR00992 Alanine racemase signature 123 135 2.0E-71 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEA_002338 67946e9ec7f77302d909b1fc75783481 361 PRINTS PR00992 Alanine racemase signature 63 81 2.0E-71 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEA_002338 67946e9ec7f77302d909b1fc75783481 361 PRINTS PR00992 Alanine racemase signature 269 284 2.0E-71 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEA_002338 67946e9ec7f77302d909b1fc75783481 361 PRINTS PR00992 Alanine racemase signature 195 222 2.0E-71 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEA_002338 67946e9ec7f77302d909b1fc75783481 361 PRINTS PR00992 Alanine racemase signature 29 45 2.0E-71 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEA_002338 67946e9ec7f77302d909b1fc75783481 361 PRINTS PR00992 Alanine racemase signature 252 267 2.0E-71 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEA_002338 67946e9ec7f77302d909b1fc75783481 361 SUPERFAMILY SSF51419 11 237 1.15E-71 T 13-10-2018 IPR029066 PLP-binding barrel VEA_002338 67946e9ec7f77302d909b1fc75783481 361 SUPERFAMILY SSF50621 229 359 3.84E-47 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VEA_002338 67946e9ec7f77302d909b1fc75783481 361 Gene3D G3DSA:3.20.20.10 13 220 4.1E-134 T 13-10-2018 IPR029066 PLP-binding barrel VEA_002338 67946e9ec7f77302d909b1fc75783481 361 TIGRFAM TIGR00492 alr: alanine racemase 7 359 5.3E-130 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEA_002338 67946e9ec7f77302d909b1fc75783481 361 SMART SM01005 236 360 8.9E-67 T 13-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEA_002338 67946e9ec7f77302d909b1fc75783481 361 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 34 44 - T 13-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEA_002338 67946e9ec7f77302d909b1fc75783481 361 Gene3D G3DSA:2.40.37.10 11 355 4.1E-134 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VEA_002338 67946e9ec7f77302d909b1fc75783481 361 Pfam PF01168 Alanine racemase, N-terminal domain 11 222 5.9E-72 T 13-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEA_002338 67946e9ec7f77302d909b1fc75783481 361 Pfam PF00842 Alanine racemase, C-terminal domain 236 359 1.8E-42 T 13-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEA_002338 67946e9ec7f77302d909b1fc75783481 361 Hamap MF_01201 Alanine racemase. 4 360 35.064 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VEA_000755 b4b32b5036a2e13d4ad57596b16791de 326 Gene3D G3DSA:2.40.160.20 13 201 1.7E-43 T 13-10-2018 VEA_000755 b4b32b5036a2e13d4ad57596b16791de 326 Gene3D G3DSA:3.30.1330.60 202 315 1.2E-32 T 13-10-2018 IPR036737 OmpA-like domain superfamily VEA_000755 b4b32b5036a2e13d4ad57596b16791de 326 SUPERFAMILY SSF56925 23 181 3.66E-34 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VEA_000755 b4b32b5036a2e13d4ad57596b16791de 326 PRINTS PR01021 OMPA domain signature 244 259 2.1E-6 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEA_000755 b4b32b5036a2e13d4ad57596b16791de 326 PRINTS PR01021 OMPA domain signature 259 275 2.1E-6 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEA_000755 b4b32b5036a2e13d4ad57596b16791de 326 SUPERFAMILY SSF103088 200 314 1.28E-31 T 13-10-2018 IPR036737 OmpA-like domain superfamily VEA_000755 b4b32b5036a2e13d4ad57596b16791de 326 Pfam PF00691 OmpA family 216 308 1.7E-18 T 13-10-2018 IPR006665 OmpA-like domain VEA_000755 b4b32b5036a2e13d4ad57596b16791de 326 Pfam PF01389 OmpA-like transmembrane domain 23 180 7.7E-22 T 13-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 VEA_003909 024409ca5e2398d333a876d88c2bf393 347 SUPERFAMILY SSF81324 23 138 1.31E-17 T 13-10-2018 VEA_003909 024409ca5e2398d333a876d88c2bf393 347 Gene3D G3DSA:3.40.50.720 112 233 2.2E-13 T 13-10-2018 VEA_003909 024409ca5e2398d333a876d88c2bf393 347 SUPERFAMILY SSF51735 121 240 6.5E-12 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_003909 024409ca5e2398d333a876d88c2bf393 347 Pfam PF07885 Ion channel 23 102 3.7E-15 T 13-10-2018 IPR013099 Potassium channel domain VEA_003909 024409ca5e2398d333a876d88c2bf393 347 Gene3D G3DSA:1.10.287.70 3 105 2.6E-12 T 13-10-2018 VEA_000808 6c771dcd9f860e58ca9075592b1ead6d 332 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 4 321 1.5E-93 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VEA_000808 6c771dcd9f860e58ca9075592b1ead6d 332 PIRSF PIRSF000267 1 332 1.6E-90 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VEA_000808 6c771dcd9f860e58ca9075592b1ead6d 332 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 5 213 1.2E-48 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VEA_004405 b17ad9f8a01b425bea4451d19dda6406 375 PIRSF PIRSF001499 1 374 6.1E-187 T 13-10-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 VEA_004405 b17ad9f8a01b425bea4451d19dda6406 375 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 3.9E-42 T 13-10-2018 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 VEA_004405 b17ad9f8a01b425bea4451d19dda6406 375 Pfam PF01817 Chorismate mutase type II 9 87 2.1E-21 T 13-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VEA_004405 b17ad9f8a01b425bea4451d19dda6406 375 Gene3D G3DSA:1.20.59.10 1 80 2.7E-17 T 13-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VEA_004405 b17ad9f8a01b425bea4451d19dda6406 375 SMART SM00830 9 89 3.2E-29 T 13-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VEA_004405 b17ad9f8a01b425bea4451d19dda6406 375 Gene3D G3DSA:1.10.3660.10 248 373 9.3E-50 T 13-10-2018 VEA_004405 b17ad9f8a01b425bea4451d19dda6406 375 SUPERFAMILY SSF48179 241 366 4.65E-41 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VEA_004405 b17ad9f8a01b425bea4451d19dda6406 375 Pfam PF02153 Prephenate dehydrogenase 138 344 2.5E-32 T 13-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 VEA_004405 b17ad9f8a01b425bea4451d19dda6406 375 Gene3D G3DSA:3.40.50.720 81 247 2.0E-43 T 13-10-2018 VEA_004405 b17ad9f8a01b425bea4451d19dda6406 375 SUPERFAMILY SSF48600 4 88 6.78E-24 T 13-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VEA_004405 b17ad9f8a01b425bea4451d19dda6406 375 SUPERFAMILY SSF51735 91 237 2.01E-37 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_004075 cfe04bfe7981bac232b8243dbb9047b7 395 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 13-10-2018 IPR018201 Beta-ketoacyl synthase, active site VEA_004075 cfe04bfe7981bac232b8243dbb9047b7 395 SUPERFAMILY SSF53901 210 391 2.47E-46 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VEA_004075 cfe04bfe7981bac232b8243dbb9047b7 395 Gene3D G3DSA:3.40.47.10 246 389 3.0E-41 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VEA_004075 cfe04bfe7981bac232b8243dbb9047b7 395 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 98 236 2.8E-20 T 13-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal VEA_004075 cfe04bfe7981bac232b8243dbb9047b7 395 SMART SM00825 Beta-ketoacyl synthase 61 338 3.7E-9 T 13-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VEA_004075 cfe04bfe7981bac232b8243dbb9047b7 395 SUPERFAMILY SSF53901 7 236 5.76E-38 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VEA_004075 cfe04bfe7981bac232b8243dbb9047b7 395 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 244 351 2.4E-27 T 13-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal VEA_004075 cfe04bfe7981bac232b8243dbb9047b7 395 Gene3D G3DSA:3.40.47.10 28 242 5.3E-32 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VEA_004228 2334983b96524dafb7fc48e2d6e6cd37 321 Pfam PF04055 Radical SAM superfamily 91 251 4.4E-18 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VEA_004228 2334983b96524dafb7fc48e2d6e6cd37 321 PIRSF PIRSF005963 1 321 1.3E-129 T 13-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VEA_004228 2334983b96524dafb7fc48e2d6e6cd37 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 25 73 7.1E-8 T 13-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VEA_004228 2334983b96524dafb7fc48e2d6e6cd37 321 SMART SM00729 84 293 2.2E-19 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VEA_004228 2334983b96524dafb7fc48e2d6e6cd37 321 SUPERFAMILY SSF102114 52 315 3.92E-68 T 13-10-2018 VEA_004228 2334983b96524dafb7fc48e2d6e6cd37 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 155.346 T 13-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VEA_004228 2334983b96524dafb7fc48e2d6e6cd37 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 319 1.3E-149 T 13-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VEA_004228 2334983b96524dafb7fc48e2d6e6cd37 321 Gene3D G3DSA:3.20.20.70 49 293 1.1E-22 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_003379 f9f7233cf579e9231508606493cc6ecf 323 Gene3D G3DSA:3.40.190.10 118 256 4.0E-109 T 13-10-2018 VEA_003379 f9f7233cf579e9231508606493cc6ecf 323 Gene3D G3DSA:3.40.190.10 31 320 4.0E-109 T 13-10-2018 VEA_003379 f9f7233cf579e9231508606493cc6ecf 323 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 5 320 4.1E-120 T 13-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family VEA_003379 f9f7233cf579e9231508606493cc6ecf 323 Pfam PF16868 NMT1-like family 31 320 2.9E-97 T 13-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family VEA_003379 f9f7233cf579e9231508606493cc6ecf 323 SUPERFAMILY SSF53850 27 322 2.95E-90 T 13-10-2018 VEA_004171 a3f1c5cfcb2473d04de52cdfc431fc44 236 Gene3D G3DSA:2.60.40.4070 111 197 2.6E-36 T 13-10-2018 VEA_004171 a3f1c5cfcb2473d04de52cdfc431fc44 236 Pfam PF03963 Flagellar hook capping protein - N-terminal region 20 86 5.4E-22 T 13-10-2018 IPR005648 Flagellar hook capping protein VEA_004171 a3f1c5cfcb2473d04de52cdfc431fc44 236 Pfam PF13860 FlgD Ig-like domain 119 185 1.4E-19 T 13-10-2018 IPR025965 FlgD Ig-like domain VEA_004171 a3f1c5cfcb2473d04de52cdfc431fc44 236 Pfam PF13861 FlgD Tudor-like domain 94 230 1.9E-15 T 13-10-2018 IPR025963 FlgD Tudor-like domain VEA_004171 a3f1c5cfcb2473d04de52cdfc431fc44 236 Gene3D G3DSA:2.30.30.910 99 223 2.6E-36 T 13-10-2018 VEA_003464 7b617f6446b88f6f3ba3bea19dce6409 573 SMART SM00387 326 437 5.1E-38 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_003464 7b617f6446b88f6f3ba3bea19dce6409 573 Gene3D G3DSA:3.30.565.10 278 438 4.4E-48 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_003464 7b617f6446b88f6f3ba3bea19dce6409 573 SMART SM00448 456 569 4.0E-38 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_003464 7b617f6446b88f6f3ba3bea19dce6409 573 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 435 4.5E-31 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_003464 7b617f6446b88f6f3ba3bea19dce6409 573 SUPERFAMILY SSF55874 268 436 3.14E-46 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_003464 7b617f6446b88f6f3ba3bea19dce6409 573 Pfam PF00512 His Kinase A (phospho-acceptor) domain 214 279 2.1E-18 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_003464 7b617f6446b88f6f3ba3bea19dce6409 573 Gene3D G3DSA:1.10.287.130 180 277 5.9E-27 T 13-10-2018 VEA_003464 7b617f6446b88f6f3ba3bea19dce6409 573 SMART SM00388 214 279 6.5E-22 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_003464 7b617f6446b88f6f3ba3bea19dce6409 573 SUPERFAMILY SSF52172 456 572 5.41E-36 T 13-10-2018 IPR011006 CheY-like superfamily VEA_003464 7b617f6446b88f6f3ba3bea19dce6409 573 Gene3D G3DSA:3.40.50.2300 439 571 7.0E-40 T 13-10-2018 VEA_003464 7b617f6446b88f6f3ba3bea19dce6409 573 Pfam PF00072 Response regulator receiver domain 459 570 8.2E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_003464 7b617f6446b88f6f3ba3bea19dce6409 573 SUPERFAMILY SSF47384 200 280 2.75E-21 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEA_003464 7b617f6446b88f6f3ba3bea19dce6409 573 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 376 5.3E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_003464 7b617f6446b88f6f3ba3bea19dce6409 573 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 390 5.3E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_003464 7b617f6446b88f6f3ba3bea19dce6409 573 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 434 5.3E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_003464 7b617f6446b88f6f3ba3bea19dce6409 573 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 415 5.3E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_002069 166c9fe2c317496e72d55f26951ad494 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 40 3.1E-4 T 13-10-2018 IPR001451 Hexapeptide repeat VEA_002069 166c9fe2c317496e72d55f26951ad494 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 96 129 1.7E-5 T 13-10-2018 IPR001451 Hexapeptide repeat VEA_002069 166c9fe2c317496e72d55f26951ad494 182 SUPERFAMILY SSF51161 4 174 2.22E-44 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily VEA_002069 166c9fe2c317496e72d55f26951ad494 182 Gene3D G3DSA:2.160.10.10 1 182 4.8E-56 T 13-10-2018 VEA_001828 e3b2b00cfb683d1f68a9d9e929fa6d6f 288 Pfam PF03755 YicC-like family, N-terminal region 2 154 4.7E-44 T 13-10-2018 IPR013527 YicC-like, N-terminal VEA_001828 e3b2b00cfb683d1f68a9d9e929fa6d6f 288 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 288 3.2E-118 T 13-10-2018 IPR005229 Conserved hypothetical protein CHP00255 VEA_001828 e3b2b00cfb683d1f68a9d9e929fa6d6f 288 Pfam PF08340 Domain of unknown function (DUF1732) 204 288 1.5E-34 T 13-10-2018 IPR013551 Domain of unknown function DUF1732 VEA_001066 01c0e1dba0b5162c0c34e16ca4d56eaf 403 Gene3D G3DSA:3.30.470.20 108 400 2.8E-33 T 13-10-2018 VEA_001066 01c0e1dba0b5162c0c34e16ca4d56eaf 403 SUPERFAMILY SSF56059 92 321 1.04E-28 T 13-10-2018 VEA_001635 c6428163e266437dd3d4638928242a1c 582 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 359 374 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VEA_001635 c6428163e266437dd3d4638928242a1c 582 Pfam PF00158 Sigma-54 interaction domain 283 438 8.0E-33 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VEA_001635 c6428163e266437dd3d4638928242a1c 582 Gene3D G3DSA:3.30.450.20 167 269 1.4E-19 T 13-10-2018 VEA_001635 c6428163e266437dd3d4638928242a1c 582 Gene3D G3DSA:1.10.10.60 532 575 1.6E-12 T 13-10-2018 VEA_001635 c6428163e266437dd3d4638928242a1c 582 SUPERFAMILY SSF52540 283 515 4.0E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001635 c6428163e266437dd3d4638928242a1c 582 Pfam PF02954 Bacterial regulatory protein, Fis family 532 573 9.8E-10 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEA_001635 c6428163e266437dd3d4638928242a1c 582 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 303 316 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VEA_001635 c6428163e266437dd3d4638928242a1c 582 SUPERFAMILY SSF55785 161 248 2.09E-7 T 13-10-2018 IPR035965 PAS domain superfamily VEA_001635 c6428163e266437dd3d4638928242a1c 582 SUPERFAMILY SSF46689 522 575 8.51E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_001635 c6428163e266437dd3d4638928242a1c 582 Gene3D G3DSA:3.30.450.40 1 143 2.7E-35 T 13-10-2018 IPR029016 GAF-like domain superfamily VEA_001635 c6428163e266437dd3d4638928242a1c 582 Pfam PF00989 PAS fold 162 249 2.3E-5 T 13-10-2018 IPR013767 PAS fold GO:0006355 VEA_001635 c6428163e266437dd3d4638928242a1c 582 Gene3D G3DSA:3.40.50.300 270 444 4.4E-41 T 13-10-2018 VEA_001635 c6428163e266437dd3d4638928242a1c 582 Gene3D G3DSA:1.10.8.60 445 520 3.0E-15 T 13-10-2018 VEA_003668 b450639a037a9a16880099a43bb16944 373 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_003668 b450639a037a9a16880099a43bb16944 373 SMART SM00382 34 217 2.7E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_003668 b450639a037a9a16880099a43bb16944 373 SUPERFAMILY SSF50331 242 361 7.23E-17 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VEA_003668 b450639a037a9a16880099a43bb16944 373 Pfam PF00005 ABC transporter 26 167 5.0E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_003668 b450639a037a9a16880099a43bb16944 373 SUPERFAMILY SSF52540 9 246 1.02E-86 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003668 b450639a037a9a16880099a43bb16944 373 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 40 359 3.0E-118 T 13-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 VEA_003668 b450639a037a9a16880099a43bb16944 373 Gene3D G3DSA:3.40.50.300 2 244 1.6E-77 T 13-10-2018 VEA_003668 b450639a037a9a16880099a43bb16944 373 Gene3D G3DSA:2.40.50.140 245 285 5.8E-6 T 13-10-2018 VEA_003668 b450639a037a9a16880099a43bb16944 373 Gene3D G3DSA:2.40.50.100 286 347 5.8E-6 T 13-10-2018 VEA_003668 b450639a037a9a16880099a43bb16944 373 Pfam PF08402 TOBE domain 283 361 2.8E-16 T 13-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VEA_004053 61306dae6f18d843d2529807115950b0 994 Gene3D G3DSA:2.60.40.10 785 869 5.4E-18 T 13-10-2018 IPR013783 Immunoglobulin-like fold VEA_004053 61306dae6f18d843d2529807115950b0 994 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 973 993 6.6E-4 T 13-10-2018 IPR020008 GlyGly-CTERM domain VEA_004053 61306dae6f18d843d2529807115950b0 994 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 147 435 5.4E-71 T 13-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 VEA_004053 61306dae6f18d843d2529807115950b0 994 ProSitePatterns PS00018 EF-hand calcium-binding domain. 247 259 - T 13-10-2018 IPR018247 EF-Hand 1, calcium-binding site VEA_004053 61306dae6f18d843d2529807115950b0 994 PIRSF PIRSF036597 3 994 0.0 T 13-10-2018 IPR012045 Peptidase M6, unassigned InhA-related VEA_004053 61306dae6f18d843d2529807115950b0 994 SUPERFAMILY SSF49299 775 871 3.73E-6 T 13-10-2018 IPR035986 PKD domain superfamily VEA_004053 61306dae6f18d843d2529807115950b0 994 SUPERFAMILY SSF55486 299 358 5.07E-7 T 13-10-2018 VEA_004053 61306dae6f18d843d2529807115950b0 994 SMART SM00089 779 871 1.1E-4 T 13-10-2018 IPR022409 PKD/Chitinase domain VEA_004053 61306dae6f18d843d2529807115950b0 994 Pfam PF05547 Immune inhibitor A peptidase M6 171 376 5.9E-14 T 13-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 VEA_001814 b1cf755bf80ee413bf727d32f4361bb4 161 SUPERFAMILY SSF52374 3 157 1.18E-43 T 13-10-2018 VEA_001814 b1cf755bf80ee413bf727d32f4361bb4 161 Pfam PF01467 Cytidylyltransferase-like 6 134 3.4E-20 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VEA_001814 b1cf755bf80ee413bf727d32f4361bb4 161 Gene3D G3DSA:3.40.50.620 1 161 2.0E-54 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_001814 b1cf755bf80ee413bf727d32f4361bb4 161 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 12 97 3.0E-4 T 13-10-2018 VEA_001814 b1cf755bf80ee413bf727d32f4361bb4 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 5.5E-49 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VEA_001814 b1cf755bf80ee413bf727d32f4361bb4 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 5.5E-49 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VEA_001814 b1cf755bf80ee413bf727d32f4361bb4 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 5.5E-49 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VEA_001814 b1cf755bf80ee413bf727d32f4361bb4 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 5.5E-49 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VEA_001814 b1cf755bf80ee413bf727d32f4361bb4 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 5.5E-49 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VEA_001814 b1cf755bf80ee413bf727d32f4361bb4 161 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 5 157 2.3E-57 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VEA_001814 b1cf755bf80ee413bf727d32f4361bb4 161 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 62 6.5E-18 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VEA_001814 b1cf755bf80ee413bf727d32f4361bb4 161 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 34.681 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VEA_002158 c6db785666d6aad589e79313fdf507bb 267 Gene3D G3DSA:3.40.50.1860 11 237 7.7E-83 T 13-10-2018 VEA_002158 c6db785666d6aad589e79313fdf507bb 267 Hamap MF_00258 Glutamate racemase [murI]. 7 255 32.928 T 13-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VEA_002158 c6db785666d6aad589e79313fdf507bb 267 TIGRFAM TIGR00067 glut_race: glutamate racemase 9 232 1.7E-69 T 13-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VEA_002158 c6db785666d6aad589e79313fdf507bb 267 SUPERFAMILY SSF53681 112 261 2.29E-33 T 13-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VEA_002158 c6db785666d6aad589e79313fdf507bb 267 Pfam PF01177 Asp/Glu/Hydantoin racemase 11 215 5.5E-28 T 13-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VEA_002158 c6db785666d6aad589e79313fdf507bb 267 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 74 82 - T 13-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VEA_002158 c6db785666d6aad589e79313fdf507bb 267 SUPERFAMILY SSF53681 8 108 2.48E-31 T 13-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VEA_002158 c6db785666d6aad589e79313fdf507bb 267 Gene3D G3DSA:3.40.50.1860 99 208 7.7E-83 T 13-10-2018 VEA_003531 55c833afb5bbf4bcd0b7c8628022fea6 228 Gene3D G3DSA:3.40.50.300 3 195 2.3E-25 T 13-10-2018 VEA_003531 55c833afb5bbf4bcd0b7c8628022fea6 228 SUPERFAMILY SSF52540 23 204 6.16E-18 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003795 2d3fce3b00fbd145de4444c6d627c9ac 215 Pfam PF00005 ABC transporter 22 163 7.4E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_003795 2d3fce3b00fbd145de4444c6d627c9ac 215 Gene3D G3DSA:3.40.50.300 1 205 9.7E-53 T 13-10-2018 VEA_003795 2d3fce3b00fbd145de4444c6d627c9ac 215 SUPERFAMILY SSF52540 10 199 2.66E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003795 2d3fce3b00fbd145de4444c6d627c9ac 215 SMART SM00382 28 214 6.2E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_004440 9695a31318700980435f0c4149ce02a4 262 SUPERFAMILY SSF52833 121 261 4.6E-37 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VEA_004440 9695a31318700980435f0c4149ce02a4 262 SUPERFAMILY SSF54423 44 100 3.92E-14 T 13-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 VEA_004440 9695a31318700980435f0c4149ce02a4 262 Gene3D G3DSA:3.10.450.70 38 101 8.2E-19 T 13-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 VEA_004440 9695a31318700980435f0c4149ce02a4 262 Gene3D G3DSA:3.40.30.10 102 262 1.0E-44 T 13-10-2018 VEA_004440 9695a31318700980435f0c4149ce02a4 262 Pfam PF10411 Disulfide bond isomerase protein N-terminus 50 98 1.3E-12 T 13-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal VEA_004440 9695a31318700980435f0c4149ce02a4 262 Pfam PF13098 Thioredoxin-like domain 132 259 4.0E-24 T 13-10-2018 IPR012336 Thioredoxin-like fold VEA_003116 8be8eba74f84ea7d440af72e74fe0b3e 228 Pfam PF13247 4Fe-4S dicluster domain 88 186 3.0E-26 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEA_003116 8be8eba74f84ea7d440af72e74fe0b3e 228 SUPERFAMILY SSF54862 40 220 4.92E-65 T 13-10-2018 VEA_003116 8be8eba74f84ea7d440af72e74fe0b3e 228 TIGRFAM TIGR03149 cyt_nit_nrfC: cytochrome c nitrite reductase, Fe-S protein 2 227 2.6E-131 T 13-10-2018 IPR017567 Cytochrome c nitrite reductase, Fe-S protein VEA_003116 8be8eba74f84ea7d440af72e74fe0b3e 228 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 130 141 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VEA_003116 8be8eba74f84ea7d440af72e74fe0b3e 228 Gene3D G3DSA:3.30.70.20 76 228 1.3E-55 T 13-10-2018 VEA_003116 8be8eba74f84ea7d440af72e74fe0b3e 228 Gene3D G3DSA:3.30.70.20 26 75 5.3E-6 T 13-10-2018 VEA_003116 8be8eba74f84ea7d440af72e74fe0b3e 228 Pfam PF12800 4Fe-4S binding domain 49 61 0.11 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEA_001172 a82e0708653d0312fb46bfb4e4fa58f8 445 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 2 100 1.1E-15 T 13-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 VEA_001172 a82e0708653d0312fb46bfb4e4fa58f8 445 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 216 439 4.9E-50 T 13-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 VEA_001172 a82e0708653d0312fb46bfb4e4fa58f8 445 Pfam PF07196 Flagellin hook IN motif 124 181 3.6E-5 T 13-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VEA_002839 9b55ea73e4cdb82018a56a00a1f823ee 164 SMART SM00260 16 153 2.5E-50 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VEA_002839 9b55ea73e4cdb82018a56a00a1f823ee 164 Gene3D G3DSA:2.30.30.40 22 147 7.0E-43 T 13-10-2018 VEA_002839 9b55ea73e4cdb82018a56a00a1f823ee 164 Gene3D G3DSA:2.40.50.180 39 148 7.0E-43 T 13-10-2018 VEA_002839 9b55ea73e4cdb82018a56a00a1f823ee 164 Pfam PF01584 CheW-like domain 20 155 4.7E-40 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VEA_002839 9b55ea73e4cdb82018a56a00a1f823ee 164 SUPERFAMILY SSF50341 15 158 9.42E-42 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VEA_001717 a9404b47b70ea5a99645541fc9be0819 330 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 318 34.701 T 13-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEA_001717 a9404b47b70ea5a99645541fc9be0819 330 SUPERFAMILY SSF47789 252 326 1.44E-25 T 13-10-2018 VEA_001717 a9404b47b70ea5a99645541fc9be0819 330 SMART SM00662 23 235 4.9E-104 T 13-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEA_001717 a9404b47b70ea5a99645541fc9be0819 330 Gene3D G3DSA:3.30.1360.10 17 229 9.5E-84 T 13-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEA_001717 a9404b47b70ea5a99645541fc9be0819 330 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 317 5.9E-112 T 13-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEA_001717 a9404b47b70ea5a99645541fc9be0819 330 SUPERFAMILY SSF56553 53 179 2.27E-40 T 13-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEA_001717 a9404b47b70ea5a99645541fc9be0819 330 Gene3D G3DSA:2.170.120.12 53 178 9.5E-84 T 13-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEA_001717 a9404b47b70ea5a99645541fc9be0819 330 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 157 4.2E-24 T 13-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEA_001717 a9404b47b70ea5a99645541fc9be0819 330 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 257 330 2.0E-36 T 13-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEA_001717 a9404b47b70ea5a99645541fc9be0819 330 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 246 309 7.1E-24 T 13-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEA_001717 a9404b47b70ea5a99645541fc9be0819 330 SUPERFAMILY SSF55257 7 234 3.53E-30 T 13-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEA_001717 a9404b47b70ea5a99645541fc9be0819 330 Gene3D G3DSA:1.10.150.20 245 330 1.4E-38 T 13-10-2018 VEA_001717 a9404b47b70ea5a99645541fc9be0819 330 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 229 2.5E-23 T 13-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VEA_000939 c1e9a6ff084b892a36569aa790a1d5fb 559 Gene3D G3DSA:3.30.2350.10 347 558 2.6E-60 T 13-10-2018 VEA_000939 c1e9a6ff084b892a36569aa790a1d5fb 559 SUPERFAMILY SSF55120 350 556 2.24E-57 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEA_000939 c1e9a6ff084b892a36569aa790a1d5fb 559 Pfam PF00849 RNA pseudouridylate synthase 365 512 9.6E-28 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEA_000939 c1e9a6ff084b892a36569aa790a1d5fb 559 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 403 417 - T 13-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEA_002931 2acc2da706095c88813f6c7c04cc5cf7 900 Gene3D G3DSA:3.40.309.10 217 398 6.8E-171 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VEA_002931 2acc2da706095c88813f6c7c04cc5cf7 900 Gene3D G3DSA:3.40.50.1970 456 642 1.5E-57 T 13-10-2018 VEA_002931 2acc2da706095c88813f6c7c04cc5cf7 900 PIRSF PIRSF000111 1 865 0.0 T 13-10-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 VEA_002931 2acc2da706095c88813f6c7c04cc5cf7 900 Gene3D G3DSA:3.40.605.10 399 455 1.7E-7 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VEA_002931 2acc2da706095c88813f6c7c04cc5cf7 900 Pfam PF00465 Iron-containing alcohol dehydrogenase 458 849 5.6E-112 T 13-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VEA_002931 2acc2da706095c88813f6c7c04cc5cf7 900 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 719 739 - T 13-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VEA_002931 2acc2da706095c88813f6c7c04cc5cf7 900 Pfam PF00171 Aldehyde dehydrogenase family 4 402 1.9E-25 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VEA_002931 2acc2da706095c88813f6c7c04cc5cf7 900 Gene3D G3DSA:3.40.605.10 15 216 6.8E-171 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VEA_002931 2acc2da706095c88813f6c7c04cc5cf7 900 SUPERFAMILY SSF53720 5 454 1.7E-84 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VEA_002931 2acc2da706095c88813f6c7c04cc5cf7 900 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 631 659 - T 13-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VEA_002931 2acc2da706095c88813f6c7c04cc5cf7 900 Gene3D G3DSA:1.20.1090.10 643 864 1.8E-59 T 13-10-2018 VEA_002931 2acc2da706095c88813f6c7c04cc5cf7 900 SUPERFAMILY SSF56796 452 863 2.49E-114 T 13-10-2018 VEA_001464 5335a324edbb47f3447ad4da4e17f92a 409 Pfam PF02687 FtsX-like permease family 292 396 3.9E-9 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VEA_001464 5335a324edbb47f3447ad4da4e17f92a 409 Pfam PF12704 MacB-like periplasmic core domain 17 207 2.6E-12 T 13-10-2018 IPR025857 MacB-like periplasmic core domain VEA_000080 3517112c235a7a62e837883b996ce285 169 Gene3D G3DSA:3.40.630.30 1 166 6.7E-39 T 13-10-2018 VEA_000080 3517112c235a7a62e837883b996ce285 169 SUPERFAMILY SSF55729 2 156 5.78E-37 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_000080 3517112c235a7a62e837883b996ce285 169 Pfam PF13302 Acetyltransferase (GNAT) domain 8 148 3.9E-25 T 13-10-2018 IPR000182 GNAT domain VEA_001836 1a8d3dbc975c2aba18d7cc49cee46621 158 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 108 113 - T 13-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site VEA_001836 1a8d3dbc975c2aba18d7cc49cee46621 158 Pfam PF04002 RadC-like JAB domain 38 157 4.8E-45 T 13-10-2018 IPR025657 RadC-like JAB domain VEA_001836 1a8d3dbc975c2aba18d7cc49cee46621 158 TIGRFAM TIGR00608 radc: DNA repair protein RadC 20 158 6.0E-44 T 13-10-2018 IPR001405 Uncharacterised protein family UPF0758 VEA_001836 1a8d3dbc975c2aba18d7cc49cee46621 158 SUPERFAMILY SSF102712 57 125 1.28E-5 T 13-10-2018 VEA_001836 1a8d3dbc975c2aba18d7cc49cee46621 158 Gene3D G3DSA:3.40.140.10 36 158 4.3E-44 T 13-10-2018 VEA_000697 e0fe3052b892335222167d4dc62dd9bc 436 SUPERFAMILY SSF54675 8 145 4.12E-34 T 13-10-2018 VEA_000697 e0fe3052b892335222167d4dc62dd9bc 436 SUPERFAMILY SSF51690 129 409 1.12E-85 T 13-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 VEA_000697 e0fe3052b892335222167d4dc62dd9bc 436 PIRSF PIRSF000484 1 396 5.1E-66 T 13-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 VEA_000697 e0fe3052b892335222167d4dc62dd9bc 436 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 178 412 1.0E-80 T 13-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 VEA_000697 e0fe3052b892335222167d4dc62dd9bc 436 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 10 412 1.4E-155 T 13-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 VEA_000697 e0fe3052b892335222167d4dc62dd9bc 436 Gene3D G3DSA:3.20.140.10 1 427 2.4E-161 T 13-10-2018 VEA_000697 e0fe3052b892335222167d4dc62dd9bc 436 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 7 413 43.151 T 13-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 VEA_000048 fc3bdb457c6cab88a9eb57d79c5a7c08 553 Gene3D G3DSA:3.40.50.300 8 228 5.3E-60 T 13-10-2018 VEA_000048 fc3bdb457c6cab88a9eb57d79c5a7c08 553 Pfam PF12592 Protein of unknown function (DUF3763) 483 535 1.9E-19 T 13-10-2018 IPR022547 ATPase, RavA, C-terminal GO:0042626 VEA_000048 fc3bdb457c6cab88a9eb57d79c5a7c08 553 Pfam PF07728 AAA domain (dynein-related subfamily) 49 179 1.9E-22 T 13-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 VEA_000048 fc3bdb457c6cab88a9eb57d79c5a7c08 553 SUPERFAMILY SSF52540 18 294 1.63E-20 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000048 fc3bdb457c6cab88a9eb57d79c5a7c08 553 Gene3D G3DSA:1.10.8.300 229 301 1.9E-25 T 13-10-2018 VEA_000048 fc3bdb457c6cab88a9eb57d79c5a7c08 553 SMART SM00382 46 189 1.1E-5 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_003959 431aa81793c41994b67a961148855f2e 741 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 740 0.0 T 13-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 VEA_003959 431aa81793c41994b67a961148855f2e 741 SUPERFAMILY SSF53659 5 740 0.0 T 13-10-2018 VEA_003959 431aa81793c41994b67a961148855f2e 741 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 740 0.0 T 13-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 VEA_003959 431aa81793c41994b67a961148855f2e 741 PIRSF PIRSF009407 1 741 0.0 T 13-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 VEA_003959 431aa81793c41994b67a961148855f2e 741 Gene3D G3DSA:3.40.718.10 409 650 2.8E-9 T 13-10-2018 VEA_002664 11370c59403ab9cce130b5b08d9fefee 341 SUPERFAMILY SSF47413 3 60 1.27E-12 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEA_002664 11370c59403ab9cce130b5b08d9fefee 341 Gene3D G3DSA:3.40.50.2300 82 319 1.7E-57 T 13-10-2018 VEA_002664 11370c59403ab9cce130b5b08d9fefee 341 SMART SM00354 4 74 7.4E-12 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEA_002664 11370c59403ab9cce130b5b08d9fefee 341 SUPERFAMILY SSF53822 65 334 2.16E-60 T 13-10-2018 IPR028082 Periplasmic binding protein-like I VEA_002664 11370c59403ab9cce130b5b08d9fefee 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 13-10-2018 VEA_002664 11370c59403ab9cce130b5b08d9fefee 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 4.4E-13 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEA_002664 11370c59403ab9cce130b5b08d9fefee 341 Pfam PF13377 Periplasmic binding protein-like domain 172 333 6.6E-35 T 13-10-2018 VEA_002664 11370c59403ab9cce130b5b08d9fefee 341 Gene3D G3DSA:1.10.260.40 1 63 1.2E-18 T 13-10-2018 VEA_002664 11370c59403ab9cce130b5b08d9fefee 341 Gene3D G3DSA:3.40.50.2300 163 293 1.7E-57 T 13-10-2018 VEA_003832 b995a2ce1af0240d89e3259da4f31ddd 152 Pfam PF05232 Chlorhexidine efflux transporter 1 63 1.2E-23 T 13-10-2018 IPR007896 Chlorhexidine efflux transporter VEA_003832 b995a2ce1af0240d89e3259da4f31ddd 152 Pfam PF05232 Chlorhexidine efflux transporter 69 131 1.2E-21 T 13-10-2018 IPR007896 Chlorhexidine efflux transporter VEA_002424 99a3c8bff65b5bb7afdcb104d685a76f 301 Gene3D G3DSA:1.10.10.10 2 140 2.3E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_002424 99a3c8bff65b5bb7afdcb104d685a76f 301 SMART SM00347 22 121 1.0E-15 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEA_002424 99a3c8bff65b5bb7afdcb104d685a76f 301 ProSitePatterns PS01117 MarR-type HTH domain signature. 60 94 - T 13-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site VEA_002424 99a3c8bff65b5bb7afdcb104d685a76f 301 Pfam PF12802 MarR family 28 85 1.2E-12 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEA_002424 99a3c8bff65b5bb7afdcb104d685a76f 301 SUPERFAMILY SSF46785 8 135 1.74E-24 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_002424 99a3c8bff65b5bb7afdcb104d685a76f 301 Pfam PF00583 Acetyltransferase (GNAT) family 192 278 5.9E-13 T 13-10-2018 IPR000182 GNAT domain VEA_002424 99a3c8bff65b5bb7afdcb104d685a76f 301 SUPERFAMILY SSF55729 144 301 1.27E-28 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_002424 99a3c8bff65b5bb7afdcb104d685a76f 301 Gene3D G3DSA:3.40.630.30 142 301 4.5E-24 T 13-10-2018 VEA_000374 25e341431e7ff49e26024d6637b1aae7 497 Gene3D G3DSA:3.40.605.10 24 458 2.5E-143 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VEA_000374 25e341431e7ff49e26024d6637b1aae7 497 Gene3D G3DSA:3.40.309.10 250 450 2.5E-143 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VEA_000374 25e341431e7ff49e26024d6637b1aae7 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VEA_000374 25e341431e7ff49e26024d6637b1aae7 497 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 5 481 3.5E-242 T 13-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 VEA_000374 25e341431e7ff49e26024d6637b1aae7 497 SUPERFAMILY SSF53720 2 483 3.8E-145 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VEA_000374 25e341431e7ff49e26024d6637b1aae7 497 Pfam PF00171 Aldehyde dehydrogenase family 17 477 3.9E-139 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VEA_000233 073e98f0d6f2053ba5d7f30724f857fc 126 Pfam PF01597 Glycine cleavage H-protein 5 125 2.6E-49 T 13-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate VEA_000233 073e98f0d6f2053ba5d7f30724f857fc 126 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 2 124 41.039 T 13-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 VEA_000233 073e98f0d6f2053ba5d7f30724f857fc 126 SUPERFAMILY SSF51230 3 125 2.49E-45 T 13-10-2018 IPR011053 Single hybrid motif VEA_000233 073e98f0d6f2053ba5d7f30724f857fc 126 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 126 5.7E-50 T 13-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 VEA_000233 073e98f0d6f2053ba5d7f30724f857fc 126 Gene3D G3DSA:2.40.50.100 1 126 3.6E-50 T 13-10-2018 VEA_002966 a4373e94c0e657a19bab5ff56ced3bec 425 Pfam PF02308 MgtC family 16 141 4.3E-17 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VEA_002966 a4373e94c0e657a19bab5ff56ced3bec 425 Pfam PF13194 Domain of unknown function (DUF4010) 189 397 2.4E-66 T 13-10-2018 IPR025105 Domain of unknown function DUF4010 VEA_001302 f8a200afd48738fff6784ed44280a5fd 382 SUPERFAMILY SSF51905 2 304 2.12E-36 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_001302 f8a200afd48738fff6784ed44280a5fd 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 255 277 2.6E-20 T 13-10-2018 VEA_001302 f8a200afd48738fff6784ed44280a5fd 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 2.6E-20 T 13-10-2018 VEA_001302 f8a200afd48738fff6784ed44280a5fd 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 2.6E-20 T 13-10-2018 VEA_001302 f8a200afd48738fff6784ed44280a5fd 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 2.6E-20 T 13-10-2018 VEA_001302 f8a200afd48738fff6784ed44280a5fd 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 230 246 2.6E-20 T 13-10-2018 VEA_001302 f8a200afd48738fff6784ed44280a5fd 382 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 1.4E-13 T 13-10-2018 VEA_001302 f8a200afd48738fff6784ed44280a5fd 382 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 145 170 1.4E-13 T 13-10-2018 VEA_001302 f8a200afd48738fff6784ed44280a5fd 382 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 270 277 1.4E-13 T 13-10-2018 VEA_001302 f8a200afd48738fff6784ed44280a5fd 382 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 231 245 1.4E-13 T 13-10-2018 VEA_001302 f8a200afd48738fff6784ed44280a5fd 382 Gene3D G3DSA:3.50.50.60 108 242 7.7E-80 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_001302 f8a200afd48738fff6784ed44280a5fd 382 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 278 2.1E-53 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VEA_001302 f8a200afd48738fff6784ed44280a5fd 382 Gene3D G3DSA:3.30.390.120 314 376 1.3E-6 T 13-10-2018 VEA_001302 f8a200afd48738fff6784ed44280a5fd 382 Gene3D G3DSA:3.50.50.60 6 278 7.7E-80 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_001012 b67a305a180cf05aecba6cbb4a0a9c3e 408 SUPERFAMILY SSF52172 5 186 3.98E-38 T 13-10-2018 IPR011006 CheY-like superfamily VEA_001012 b67a305a180cf05aecba6cbb4a0a9c3e 408 SUPERFAMILY SSF46689 349 401 7.17E-7 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_001012 b67a305a180cf05aecba6cbb4a0a9c3e 408 Gene3D G3DSA:3.40.50.300 143 273 5.0E-8 T 13-10-2018 VEA_001012 b67a305a180cf05aecba6cbb4a0a9c3e 408 Pfam PF02954 Bacterial regulatory protein, Fis family 361 398 2.3E-6 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEA_001012 b67a305a180cf05aecba6cbb4a0a9c3e 408 Gene3D G3DSA:1.10.10.60 346 403 5.4E-7 T 13-10-2018 VEA_001012 b67a305a180cf05aecba6cbb4a0a9c3e 408 SMART SM00448 3 114 5.7E-32 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_001012 b67a305a180cf05aecba6cbb4a0a9c3e 408 Gene3D G3DSA:3.40.50.2300 2 135 1.0E-34 T 13-10-2018 VEA_001012 b67a305a180cf05aecba6cbb4a0a9c3e 408 Pfam PF00072 Response regulator receiver domain 5 114 2.4E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_001012 b67a305a180cf05aecba6cbb4a0a9c3e 408 Gene3D G3DSA:1.10.8.60 277 345 1.2E-10 T 13-10-2018 VEA_001012 b67a305a180cf05aecba6cbb4a0a9c3e 408 SUPERFAMILY SSF52540 144 334 4.25E-13 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003612 6266ecf9e075e917d9c4890fcf657599 203 Pfam PF12261 Thermostable hemolysin 18 188 2.3E-60 T 13-10-2018 IPR022050 Thermostable hemolysin VEA_001713 283ec5b878522e6f1752902d7ac3b8d3 198 Pfam PF08525 Opacity-associated protein A N-terminal motif 45 71 6.2E-7 T 13-10-2018 IPR013731 Opacity-associated protein A, N-terminal VEA_001713 283ec5b878522e6f1752902d7ac3b8d3 198 Gene3D G3DSA:3.10.450.350 102 194 1.4E-14 T 13-10-2018 VEA_001713 283ec5b878522e6f1752902d7ac3b8d3 198 Pfam PF04225 Opacity-associated protein A LysM-like domain 114 198 1.1E-37 T 13-10-2018 IPR007340 Opacity-associated protein A VEA_003100 9d6f1debeff7b35f3b266fd4dd4e0ba7 185 PIRSF PIRSF000847 1 184 3.6E-46 T 13-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 VEA_003100 9d6f1debeff7b35f3b266fd4dd4e0ba7 185 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 1.4E-17 T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VEA_003100 9d6f1debeff7b35f3b266fd4dd4e0ba7 185 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VEA_003100 9d6f1debeff7b35f3b266fd4dd4e0ba7 185 Gene3D G3DSA:1.20.120.1760 2 180 1.8E-17 T 13-10-2018 VEA_003100 9d6f1debeff7b35f3b266fd4dd4e0ba7 185 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 180 4.3E-55 T 13-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 VEA_003928 89b5f5e4b485ac62696d0cf889078237 245 PIRSF PIRSF006325 4 245 4.1E-125 T 13-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 VEA_003928 89b5f5e4b485ac62696d0cf889078237 245 Pfam PF13649 Methyltransferase domain 63 161 1.7E-13 T 13-10-2018 VEA_003928 89b5f5e4b485ac62696d0cf889078237 245 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 8 245 9.5E-117 T 13-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 VEA_003928 89b5f5e4b485ac62696d0cf889078237 245 Gene3D G3DSA:3.40.50.150 21 245 3.6E-65 T 13-10-2018 VEA_003928 89b5f5e4b485ac62696d0cf889078237 245 SUPERFAMILY SSF53335 23 245 2.01E-41 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_003928 89b5f5e4b485ac62696d0cf889078237 245 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 6 245 43.346 T 13-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 VEA_003844 f396265a0d8c3aa37ecf96e6efa3dacf 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 1.1E-77 T 13-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 VEA_003844 f396265a0d8c3aa37ecf96e6efa3dacf 245 Gene3D G3DSA:3.20.20.70 1 245 1.3E-88 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_003844 f396265a0d8c3aa37ecf96e6efa3dacf 245 SUPERFAMILY SSF51366 2 242 2.76E-63 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VEA_003844 f396265a0d8c3aa37ecf96e6efa3dacf 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 34.51 T 13-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 VEA_003844 f396265a0d8c3aa37ecf96e6efa3dacf 245 Pfam PF00977 Histidine biosynthesis protein 2 234 1.8E-75 T 13-10-2018 IPR006062 Histidine biosynthesis GO:0000105 VEA_000882 66ffed35194c4e6907b81e01082c6276 378 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 8.8E-157 T 13-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 VEA_000882 66ffed35194c4e6907b81e01082c6276 378 Pfam PF02595 Glycerate kinase family 3 374 2.0E-146 T 13-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 VEA_000882 66ffed35194c4e6907b81e01082c6276 378 SUPERFAMILY SSF110738 1 375 4.71E-139 T 13-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 VEA_000882 66ffed35194c4e6907b81e01082c6276 378 PIRSF PIRSF006078 1 378 2.7E-133 T 13-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 VEA_000882 66ffed35194c4e6907b81e01082c6276 378 Gene3D G3DSA:3.90.1510.10 42 276 1.4E-138 T 13-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 VEA_000882 66ffed35194c4e6907b81e01082c6276 378 Gene3D G3DSA:3.40.50.10350 1 362 1.4E-138 T 13-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold VEA_000595 957a3ad7ccc5fb0c4e69f974cf760211 389 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 280 370 2.8E-22 T 13-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VEA_000595 957a3ad7ccc5fb0c4e69f974cf760211 389 Gene3D G3DSA:3.40.710.10 17 278 4.6E-89 T 13-10-2018 VEA_000595 957a3ad7ccc5fb0c4e69f974cf760211 389 SMART SM00936 280 370 2.4E-30 T 13-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VEA_000595 957a3ad7ccc5fb0c4e69f974cf760211 389 SUPERFAMILY SSF56601 9 280 1.38E-83 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VEA_000595 957a3ad7ccc5fb0c4e69f974cf760211 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 146 159 5.9E-16 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VEA_000595 957a3ad7ccc5fb0c4e69f974cf760211 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 119 136 5.9E-16 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VEA_000595 957a3ad7ccc5fb0c4e69f974cf760211 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 63 74 5.9E-16 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VEA_000595 957a3ad7ccc5fb0c4e69f974cf760211 389 Gene3D G3DSA:2.60.410.10 280 370 1.7E-28 T 13-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VEA_000595 957a3ad7ccc5fb0c4e69f974cf760211 389 SUPERFAMILY SSF69189 280 372 3.53E-25 T 13-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VEA_000595 957a3ad7ccc5fb0c4e69f974cf760211 389 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 30 260 2.9E-84 T 13-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 VEA_003128 7925c15efa2f1fc0f3cd3b2eaf36f39a 169 Gene3D G3DSA:3.30.1380.10 53 169 1.9E-10 T 13-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VEA_003128 7925c15efa2f1fc0f3cd3b2eaf36f39a 169 Pfam PF05951 Bacterial protein of unknown function (DUF882) 22 169 1.9E-66 T 13-10-2018 IPR010275 Protein of unknown function DUF882 VEA_003128 7925c15efa2f1fc0f3cd3b2eaf36f39a 169 SUPERFAMILY SSF55166 53 169 1.75E-33 T 13-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VEA_004149 dfc54f4821548b9019b9e1b4c7f76027 284 SUPERFAMILY SSF52833 3 113 6.61E-27 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VEA_004149 dfc54f4821548b9019b9e1b4c7f76027 284 Gene3D G3DSA:3.40.30.10 2 111 2.4E-22 T 13-10-2018 VEA_004149 dfc54f4821548b9019b9e1b4c7f76027 284 Pfam PF00085 Thioredoxin 6 109 1.3E-15 T 13-10-2018 IPR013766 Thioredoxin domain GO:0045454 VEA_004149 dfc54f4821548b9019b9e1b4c7f76027 284 Gene3D G3DSA:1.25.40.10 197 284 4.8E-23 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_004149 dfc54f4821548b9019b9e1b4c7f76027 284 Gene3D G3DSA:1.25.40.10 112 196 2.3E-23 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_004149 dfc54f4821548b9019b9e1b4c7f76027 284 Pfam PF14561 Tetratricopeptide repeat 195 284 1.1E-28 T 13-10-2018 VEA_004149 dfc54f4821548b9019b9e1b4c7f76027 284 Pfam PF14559 Tetratricopeptide repeat 124 190 9.8E-13 T 13-10-2018 VEA_003599 c5cca85a63f4bddeadf98057a23c9b0e 262 Gene3D G3DSA:3.90.1580.10 30 260 1.8E-58 T 13-10-2018 VEA_003599 c5cca85a63f4bddeadf98057a23c9b0e 262 SUPERFAMILY SSF56436 37 261 2.07E-57 T 13-10-2018 IPR016187 C-type lectin fold VEA_003599 c5cca85a63f4bddeadf98057a23c9b0e 262 Pfam PF03781 Sulfatase-modifying factor enzyme 1 38 259 2.3E-45 T 13-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 VEA_000390 38740dcaa7153b2b03662174ab491927 251 Gene3D G3DSA:3.10.310.10 114 245 3.8E-65 T 13-10-2018 VEA_000390 38740dcaa7153b2b03662174ab491927 251 PIRSF PIRSF016184 1 250 5.7E-50 T 13-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 VEA_000390 38740dcaa7153b2b03662174ab491927 251 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 5 223 4.1E-24 T 13-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 VEA_000390 38740dcaa7153b2b03662174ab491927 251 SUPERFAMILY SSF54506 3 246 1.37E-59 T 13-10-2018 VEA_000390 38740dcaa7153b2b03662174ab491927 251 Gene3D G3DSA:3.10.310.10 6 246 3.8E-65 T 13-10-2018 VEA_000390 38740dcaa7153b2b03662174ab491927 251 Pfam PF02567 Phenazine biosynthesis-like protein 7 223 1.5E-37 T 13-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 VEA_001735 abc0a95d3b1f5f1fd7223b93a4e566e9 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 13-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_001735 abc0a95d3b1f5f1fd7223b93a4e566e9 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.508 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001735 abc0a95d3b1f5f1fd7223b93a4e566e9 136 Gene3D G3DSA:3.90.1170.10 1 136 4.7E-54 T 13-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 VEA_001735 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 3.4E-40 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001735 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 3.4E-40 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001735 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 3.4E-40 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001735 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 3.4E-40 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001735 abc0a95d3b1f5f1fd7223b93a4e566e9 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 125 4.7E-57 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001735 abc0a95d3b1f5f1fd7223b93a4e566e9 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 8.8E-47 T 13-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 VEA_001735 abc0a95d3b1f5f1fd7223b93a4e566e9 136 SUPERFAMILY SSF54686 3 133 4.19E-53 T 13-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 VEA_002758 73036b577ff636f247591f9e9c312f2d 143 Pfam PF07977 FabA-like domain 10 134 5.8E-40 T 13-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VEA_002758 73036b577ff636f247591f9e9c312f2d 143 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 1 142 36.701 T 13-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VEA_002758 73036b577ff636f247591f9e9c312f2d 143 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 1 139 3.5E-60 T 13-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VEA_002758 73036b577ff636f247591f9e9c312f2d 143 Gene3D G3DSA:3.10.129.10 1 143 3.1E-61 T 13-10-2018 VEA_002758 73036b577ff636f247591f9e9c312f2d 143 SUPERFAMILY SSF54637 1 139 3.51E-49 T 13-10-2018 IPR029069 HotDog domain superfamily VEA_002113 c72d6ee632a04668a1bb5e6464d795f2 310 SUPERFAMILY SSF47823 16 107 4.51E-12 T 13-10-2018 VEA_002113 c72d6ee632a04668a1bb5e6464d795f2 310 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 18 306 1.1E-108 T 13-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 VEA_002113 c72d6ee632a04668a1bb5e6464d795f2 310 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 15 304 54.928 T 13-10-2018 IPR023009 Tyrosine recombinase XerC/XerD VEA_002113 c72d6ee632a04668a1bb5e6464d795f2 310 Pfam PF00589 Phage integrase family 122 290 6.0E-49 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VEA_002113 c72d6ee632a04668a1bb5e6464d795f2 310 Gene3D G3DSA:1.10.150.130 14 108 2.4E-17 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal VEA_002113 c72d6ee632a04668a1bb5e6464d795f2 310 Gene3D G3DSA:1.10.443.10 121 298 6.2E-57 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VEA_002113 c72d6ee632a04668a1bb5e6464d795f2 310 SUPERFAMILY SSF56349 116 302 1.15E-52 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VEA_002113 c72d6ee632a04668a1bb5e6464d795f2 310 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 17 100 5.2E-20 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VEA_002339 e2d3dac11da7221b5b0cde3f7d5c4c1a 148 PIRSF PIRSF004681 1 139 5.5E-47 T 13-10-2018 IPR001602 Uncharacterised protein family UPF0047 VEA_002339 e2d3dac11da7221b5b0cde3f7d5c4c1a 148 Gene3D G3DSA:2.60.120.460 2 139 4.1E-43 T 13-10-2018 IPR035917 YjbQ-like superfamily VEA_002339 e2d3dac11da7221b5b0cde3f7d5c4c1a 148 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 100 118 - T 13-10-2018 IPR001602 Uncharacterised protein family UPF0047 VEA_002339 e2d3dac11da7221b5b0cde3f7d5c4c1a 148 SUPERFAMILY SSF111038 1 139 5.76E-50 T 13-10-2018 IPR035917 YjbQ-like superfamily VEA_002339 e2d3dac11da7221b5b0cde3f7d5c4c1a 148 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 5 139 1.9E-45 T 13-10-2018 IPR001602 Uncharacterised protein family UPF0047 VEA_002339 e2d3dac11da7221b5b0cde3f7d5c4c1a 148 Pfam PF01894 Uncharacterised protein family UPF0047 19 135 9.6E-40 T 13-10-2018 IPR001602 Uncharacterised protein family UPF0047 VEA_004326 5afed4ea0bc4191ec2a9b170ad08c08b 418 Pfam PF01266 FAD dependent oxidoreductase 3 397 3.0E-71 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VEA_004326 5afed4ea0bc4191ec2a9b170ad08c08b 418 Gene3D G3DSA:3.30.9.10 134 362 3.1E-55 T 13-10-2018 VEA_004326 5afed4ea0bc4191ec2a9b170ad08c08b 418 SUPERFAMILY SSF54373 270 360 5.62E-18 T 13-10-2018 VEA_004326 5afed4ea0bc4191ec2a9b170ad08c08b 418 Gene3D G3DSA:3.50.50.60 93 404 3.1E-55 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_004326 5afed4ea0bc4191ec2a9b170ad08c08b 418 SUPERFAMILY SSF51905 1 407 4.92E-52 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_004326 5afed4ea0bc4191ec2a9b170ad08c08b 418 Gene3D G3DSA:3.50.50.60 3 58 4.0E-10 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_004255 31b7547f0521d00136fbf980265572e2 253 Pfam PF01618 MotA/TolQ/ExbB proton channel family 99 213 6.4E-22 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VEA_004255 31b7547f0521d00136fbf980265572e2 253 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 182 199 - T 13-10-2018 IPR000540 Flagellar motor protein MotA, conserved site VEA_000190 894c776d7fe7172d7e24cc9f44b35077 544 SUPERFAMILY SSF52540 1 324 6.55E-18 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000190 894c776d7fe7172d7e24cc9f44b35077 544 Gene3D G3DSA:3.40.50.300 1 328 9.3E-16 T 13-10-2018 VEA_000190 894c776d7fe7172d7e24cc9f44b35077 544 Pfam PF11398 Protein of unknown function (DUF2813) 1 370 1.1E-146 T 13-10-2018 IPR022602 Protein of unknown function DUF2813 VEA_003223 e8c72dd74e3ef14712bfd66227138763 169 Pfam PF13420 Acetyltransferase (GNAT) domain 3 158 2.3E-22 T 13-10-2018 VEA_003223 e8c72dd74e3ef14712bfd66227138763 169 Gene3D G3DSA:3.40.630.30 2 166 3.1E-41 T 13-10-2018 VEA_003223 e8c72dd74e3ef14712bfd66227138763 169 SUPERFAMILY SSF55729 2 162 6.13E-28 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_002914 aade74c4333e2cdf2ed097fd85b5af5f 670 Gene3D G3DSA:3.20.20.70 4 370 4.7E-121 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_002914 aade74c4333e2cdf2ed097fd85b5af5f 670 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 331 2.7E-82 T 13-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 VEA_002914 aade74c4333e2cdf2ed097fd85b5af5f 670 Gene3D G3DSA:3.50.50.60 471 623 3.4E-108 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_002914 aade74c4333e2cdf2ed097fd85b5af5f 670 SUPERFAMILY SSF51971 376 625 3.35E-41 T 13-10-2018 VEA_002914 aade74c4333e2cdf2ed097fd85b5af5f 670 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 378 630 6.0E-25 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VEA_002914 aade74c4333e2cdf2ed097fd85b5af5f 670 PRINTS PR00419 Adrenodoxin reductase family signature 401 414 1.7E-9 T 13-10-2018 VEA_002914 aade74c4333e2cdf2ed097fd85b5af5f 670 PRINTS PR00419 Adrenodoxin reductase family signature 378 400 1.7E-9 T 13-10-2018 VEA_002914 aade74c4333e2cdf2ed097fd85b5af5f 670 Gene3D G3DSA:3.40.50.720 377 664 3.4E-108 T 13-10-2018 VEA_002914 aade74c4333e2cdf2ed097fd85b5af5f 670 SUPERFAMILY SSF51395 4 364 5.38E-108 T 13-10-2018 VEA_001000 7b0cbff8a9e8e1e184d4bdbf79531a6d 484 Gene3D G3DSA:3.30.1360.60 3 79 2.9E-19 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VEA_001000 7b0cbff8a9e8e1e184d4bdbf79531a6d 484 SUPERFAMILY SSF55604 8 81 3.53E-18 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VEA_001000 7b0cbff8a9e8e1e184d4bdbf79531a6d 484 Pfam PF02378 Phosphotransferase system, EIIC 130 411 5.1E-31 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VEA_001000 7b0cbff8a9e8e1e184d4bdbf79531a6d 484 Pfam PF00367 phosphotransferase system, EIIB 11 43 3.7E-10 T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VEA_001000 7b0cbff8a9e8e1e184d4bdbf79531a6d 484 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VEA_004254 d79dcdfa72ba2c406093929d6110e06b 315 SUPERFAMILY SSF103088 183 300 3.66E-30 T 13-10-2018 IPR036737 OmpA-like domain superfamily VEA_004254 d79dcdfa72ba2c406093929d6110e06b 315 Pfam PF00691 OmpA family 196 294 6.5E-17 T 13-10-2018 IPR006665 OmpA-like domain VEA_004254 d79dcdfa72ba2c406093929d6110e06b 315 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 13 58 2.3E-17 T 13-10-2018 IPR025713 Motility protein B, N-terminal domain VEA_004254 d79dcdfa72ba2c406093929d6110e06b 315 Gene3D G3DSA:3.30.1330.60 154 302 2.3E-53 T 13-10-2018 IPR036737 OmpA-like domain superfamily VEA_001301 acd8083b14a1631af28e811f82fb761f 500 Pfam PF00258 Flavodoxin 256 388 4.3E-11 T 13-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VEA_001301 acd8083b14a1631af28e811f82fb761f 500 Pfam PF00753 Metallo-beta-lactamase superfamily 34 175 1.3E-9 T 13-10-2018 IPR001279 Metallo-beta-lactamase VEA_001301 acd8083b14a1631af28e811f82fb761f 500 SUPERFAMILY SSF56281 8 283 5.28E-52 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEA_001301 acd8083b14a1631af28e811f82fb761f 500 PRINTS PR00163 Rubredoxin signature 479 495 2.0E-5 T 13-10-2018 IPR024935 Rubredoxin domain GO:0005506 VEA_001301 acd8083b14a1631af28e811f82fb761f 500 PRINTS PR00163 Rubredoxin signature 449 465 2.0E-5 T 13-10-2018 IPR024935 Rubredoxin domain GO:0005506 VEA_001301 acd8083b14a1631af28e811f82fb761f 500 Pfam PF00301 Rubredoxin 450 495 3.0E-18 T 13-10-2018 IPR024935 Rubredoxin domain GO:0005506 VEA_001301 acd8083b14a1631af28e811f82fb761f 500 SUPERFAMILY SSF57802 447 499 6.23E-17 T 13-10-2018 VEA_001301 acd8083b14a1631af28e811f82fb761f 500 SUPERFAMILY SSF52218 251 398 1.27E-35 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VEA_001301 acd8083b14a1631af28e811f82fb761f 500 Gene3D G3DSA:3.60.15.10 1 247 3.6E-105 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEA_001301 acd8083b14a1631af28e811f82fb761f 500 Gene3D G3DSA:2.20.28.10 448 500 5.1E-21 T 13-10-2018 VEA_001301 acd8083b14a1631af28e811f82fb761f 500 SMART SM00849 34 209 8.0E-28 T 13-10-2018 IPR001279 Metallo-beta-lactamase VEA_001301 acd8083b14a1631af28e811f82fb761f 500 Gene3D G3DSA:3.40.50.360 253 395 5.3E-39 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VEA_000267 a9bff20fa17c04ed7f60d06a211be3c9 466 Pfam PF09360 Iron-binding zinc finger CDGSH type 9 30 7.1E-8 T 13-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 VEA_000267 a9bff20fa17c04ed7f60d06a211be3c9 466 Pfam PF01645 Conserved region in glutamate synthase 124 433 1.1E-90 T 13-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 VEA_000267 a9bff20fa17c04ed7f60d06a211be3c9 466 SMART SM00704 2 35 1.5E-5 T 13-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 VEA_000267 a9bff20fa17c04ed7f60d06a211be3c9 466 Gene3D G3DSA:3.20.20.70 127 465 3.3E-102 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_000267 a9bff20fa17c04ed7f60d06a211be3c9 466 PIRSF PIRSF500061 1 466 2.9E-155 T 13-10-2018 VEA_000267 a9bff20fa17c04ed7f60d06a211be3c9 466 Gene3D G3DSA:3.40.5.90 1 45 3.5E-10 T 13-10-2018 VEA_000267 a9bff20fa17c04ed7f60d06a211be3c9 466 PIRSF PIRSF006429 1 465 1.2E-146 T 13-10-2018 IPR024188 Glutamate synthase large subunit-like protein VEA_000267 a9bff20fa17c04ed7f60d06a211be3c9 466 SUPERFAMILY SSF51395 80 459 5.13E-100 T 13-10-2018 VEA_000232 bd91c62b4b9214784c61b85d9c3a232b 431 Gene3D G3DSA:3.90.1150.10 21 404 3.4E-187 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEA_000232 bd91c62b4b9214784c61b85d9c3a232b 431 PIRSF PIRSF000412 4 431 1.3E-168 T 13-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VEA_000232 bd91c62b4b9214784c61b85d9c3a232b 431 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 17 431 53.518 T 13-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VEA_000232 bd91c62b4b9214784c61b85d9c3a232b 431 Pfam PF00464 Serine hydroxymethyltransferase 19 395 9.0E-176 T 13-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VEA_000232 bd91c62b4b9214784c61b85d9c3a232b 431 Gene3D G3DSA:3.40.640.10 47 298 3.4E-187 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_000232 bd91c62b4b9214784c61b85d9c3a232b 431 SUPERFAMILY SSF53383 9 430 2.29E-182 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_000232 bd91c62b4b9214784c61b85d9c3a232b 431 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 232 248 - T 13-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VEA_000435 ba6bf4fc67093510758145f73e19f07c 1130 Pfam PF06761 Intracellular multiplication and human macrophage-killing 486 755 7.8E-44 T 13-10-2018 IPR009612 ImcF-related VEA_000435 ba6bf4fc67093510758145f73e19f07c 1130 Pfam PF06744 Type VI secretion protein IcmF C-terminal 879 1078 1.7E-47 T 13-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal VEA_000435 ba6bf4fc67093510758145f73e19f07c 1130 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 92 1127 1.2E-173 T 13-10-2018 IPR017731 Type VI secretion system, IcmF VEA_000435 ba6bf4fc67093510758145f73e19f07c 1130 Pfam PF14331 ImcF-related N-terminal domain 154 407 1.7E-48 T 13-10-2018 IPR025743 ImcF-related, N-terminal domain VEA_002759 5c364f1a860677f7619c53c97b0d1a53 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 4.4E-7 T 13-10-2018 IPR001451 Hexapeptide repeat VEA_002759 5c364f1a860677f7619c53c97b0d1a53 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 36 69 7.3E-5 T 13-10-2018 IPR001451 Hexapeptide repeat VEA_002759 5c364f1a860677f7619c53c97b0d1a53 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 2 33 2.4E-6 T 13-10-2018 IPR001451 Hexapeptide repeat VEA_002759 5c364f1a860677f7619c53c97b0d1a53 262 PIRSF PIRSF000456 4 262 1.7E-95 T 13-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 VEA_002759 5c364f1a860677f7619c53c97b0d1a53 262 SUPERFAMILY SSF51161 1 262 1.79E-73 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily VEA_002759 5c364f1a860677f7619c53c97b0d1a53 262 Gene3D G3DSA:1.20.1180.10 197 262 9.4E-22 T 13-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 VEA_002759 5c364f1a860677f7619c53c97b0d1a53 262 Gene3D G3DSA:2.160.10.10 1 196 8.0E-50 T 13-10-2018 VEA_002759 5c364f1a860677f7619c53c97b0d1a53 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 6.6E-25 T 13-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 VEA_002759 5c364f1a860677f7619c53c97b0d1a53 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 2.8E-95 T 13-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 VEA_002759 5c364f1a860677f7619c53c97b0d1a53 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 42.8 T 13-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 VEA_004225 99fe440a0fa38975abc688351323c9c5 392 Gene3D G3DSA:3.40.710.10 27 282 5.3E-89 T 13-10-2018 VEA_004225 99fe440a0fa38975abc688351323c9c5 392 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 34 263 1.1E-93 T 13-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 VEA_004225 99fe440a0fa38975abc688351323c9c5 392 Gene3D G3DSA:2.60.410.10 283 373 5.2E-31 T 13-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VEA_004225 99fe440a0fa38975abc688351323c9c5 392 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 283 373 3.8E-29 T 13-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VEA_004225 99fe440a0fa38975abc688351323c9c5 392 SUPERFAMILY SSF69189 283 375 3.34E-28 T 13-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VEA_004225 99fe440a0fa38975abc688351323c9c5 392 SMART SM00936 283 373 1.4E-38 T 13-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VEA_004225 99fe440a0fa38975abc688351323c9c5 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 122 139 3.0E-17 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VEA_004225 99fe440a0fa38975abc688351323c9c5 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 149 162 3.0E-17 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VEA_004225 99fe440a0fa38975abc688351323c9c5 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 66 77 3.0E-17 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VEA_004225 99fe440a0fa38975abc688351323c9c5 392 SUPERFAMILY SSF56601 11 283 7.52E-84 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VEA_001290 3331a4817bac5faf3114ae6bd5670696 308 SUPERFAMILY SSF46785 6 88 7.23E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_001290 3331a4817bac5faf3114ae6bd5670696 308 Gene3D G3DSA:1.10.10.10 8 97 1.6E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001290 3331a4817bac5faf3114ae6bd5670696 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 6.6E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_001290 3331a4817bac5faf3114ae6bd5670696 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 6.6E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_001290 3331a4817bac5faf3114ae6bd5670696 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 6.6E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_001290 3331a4817bac5faf3114ae6bd5670696 308 Gene3D G3DSA:3.40.190.10 164 266 7.3E-48 T 13-10-2018 VEA_001290 3331a4817bac5faf3114ae6bd5670696 308 Pfam PF03466 LysR substrate binding domain 94 298 9.3E-35 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_001290 3331a4817bac5faf3114ae6bd5670696 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.8E-18 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_001290 3331a4817bac5faf3114ae6bd5670696 308 Gene3D G3DSA:3.40.190.10 104 294 7.3E-48 T 13-10-2018 VEA_001290 3331a4817bac5faf3114ae6bd5670696 308 SUPERFAMILY SSF53850 95 302 3.57E-37 T 13-10-2018 VEA_003310 4f5cf265c4be72425c679917a632c492 233 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 2 173 7.6E-30 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VEA_003310 4f5cf265c4be72425c679917a632c492 233 Gene3D G3DSA:2.40.30.170 114 233 4.3E-28 T 13-10-2018 VEA_003310 4f5cf265c4be72425c679917a632c492 233 Gene3D G3DSA:1.10.287.470 21 95 1.4E-7 T 13-10-2018 VEA_003310 4f5cf265c4be72425c679917a632c492 233 SUPERFAMILY SSF111369 3 183 3.53E-21 T 13-10-2018 VEA_003310 4f5cf265c4be72425c679917a632c492 233 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 5 174 6.9E-11 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VEA_002609 0f264e15573c06afe85ce30da22afb89 902 Gene3D G3DSA:3.40.50.10050 696 802 5.5E-38 T 13-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily VEA_002609 0f264e15573c06afe85ce30da22afb89 902 SUPERFAMILY SSF50447 803 899 8.44E-35 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VEA_002609 0f264e15573c06afe85ce30da22afb89 902 Pfam PF00009 Elongation factor Tu GTP binding domain 405 561 4.7E-32 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_002609 0f264e15573c06afe85ce30da22afb89 902 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 405 559 2.5E-34 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VEA_002609 0f264e15573c06afe85ce30da22afb89 902 SUPERFAMILY SSF52156 679 808 8.76E-39 T 13-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily VEA_002609 0f264e15573c06afe85ce30da22afb89 902 Pfam PF11987 Translation-initiation factor 2 686 791 2.0E-37 T 13-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 VEA_002609 0f264e15573c06afe85ce30da22afb89 902 Gene3D G3DSA:2.40.30.10 803 900 1.2E-34 T 13-10-2018 VEA_002609 0f264e15573c06afe85ce30da22afb89 902 Pfam PF03144 Elongation factor Tu domain 2 822 888 3.2E-7 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VEA_002609 0f264e15573c06afe85ce30da22afb89 902 Gene3D G3DSA:3.40.50.300 398 572 6.0E-70 T 13-10-2018 VEA_002609 0f264e15573c06afe85ce30da22afb89 902 Gene3D G3DSA:2.40.30.10 573 691 3.4E-40 T 13-10-2018 VEA_002609 0f264e15573c06afe85ce30da22afb89 902 Gene3D G3DSA:3.30.56.50 2 50 2.2E-23 T 13-10-2018 VEA_002609 0f264e15573c06afe85ce30da22afb89 902 SUPERFAMILY SSF52540 400 566 4.39E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002609 0f264e15573c06afe85ce30da22afb89 902 SUPERFAMILY SSF50447 575 656 1.02E-22 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VEA_002609 0f264e15573c06afe85ce30da22afb89 902 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 319 901 1.7E-284 T 13-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 VEA_002609 0f264e15573c06afe85ce30da22afb89 902 SUPERFAMILY SSF46955 3 50 1.76E-12 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily VEA_002609 0f264e15573c06afe85ce30da22afb89 902 ProSitePatterns PS01176 Initiation factor 2 signature. 852 874 - T 13-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 VEA_002609 0f264e15573c06afe85ce30da22afb89 902 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 899 17.644 T 13-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 VEA_002609 0f264e15573c06afe85ce30da22afb89 902 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 62 100 7.2E-16 T 13-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial VEA_002609 0f264e15573c06afe85ce30da22afb89 902 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 1.3E-8 T 13-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal VEA_002609 0f264e15573c06afe85ce30da22afb89 902 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 327 376 5.8E-14 T 13-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal VEA_000090 f22295fb1c09bb8830de54b40c230693 500 SUPERFAMILY SSF55874 372 498 1.27E-15 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_000090 f22295fb1c09bb8830de54b40c230693 500 SMART SM00387 407 500 0.0048 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_000090 f22295fb1c09bb8830de54b40c230693 500 Gene3D G3DSA:3.30.565.10 371 499 3.9E-25 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_000090 f22295fb1c09bb8830de54b40c230693 500 Pfam PF07730 Histidine kinase 304 367 2.2E-11 T 13-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 VEA_000090 f22295fb1c09bb8830de54b40c230693 500 Pfam PF05231 MASE1 12 268 1.5E-13 T 13-10-2018 IPR007895 MASE1 VEA_001068 00856524e44987687ba34834e08aa9ea 712 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 56 - T 13-10-2018 IPR010916 TonB box, conserved site VEA_001068 00856524e44987687ba34834e08aa9ea 712 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 68 712 2.8E-164 T 13-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 VEA_001068 00856524e44987687ba34834e08aa9ea 712 Gene3D G3DSA:2.170.130.10 64 185 1.1E-29 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VEA_001068 00856524e44987687ba34834e08aa9ea 712 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 177 2.6E-24 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain VEA_001068 00856524e44987687ba34834e08aa9ea 712 Gene3D G3DSA:2.40.170.20 192 712 2.6E-114 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VEA_001068 00856524e44987687ba34834e08aa9ea 712 Pfam PF00593 TonB dependent receptor 265 711 2.6E-47 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VEA_001068 00856524e44987687ba34834e08aa9ea 712 SUPERFAMILY SSF56935 39 712 5.76E-124 T 13-10-2018 VEA_003488 b52fad8da609f47398664c8aade27176 406 ProSitePatterns PS01219 Ammonium transporters signature. 167 192 - T 13-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 VEA_003488 b52fad8da609f47398664c8aade27176 406 Pfam PF00909 Ammonium Transporter Family 23 399 2.3E-88 T 13-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 VEA_003488 b52fad8da609f47398664c8aade27176 406 SUPERFAMILY SSF111352 17 384 4.71E-96 T 13-10-2018 VEA_003488 b52fad8da609f47398664c8aade27176 406 Gene3D G3DSA:1.10.3430.10 2 406 6.0E-102 T 13-10-2018 IPR029020 Ammonium/urea transporter VEA_001499 8eb1e91a71f7911e47f59b36125a32f9 407 Gene3D G3DSA:3.40.50.1100 17 212 3.3E-167 T 13-10-2018 VEA_001499 8eb1e91a71f7911e47f59b36125a32f9 407 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 61 383 7.8E-42 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VEA_001499 8eb1e91a71f7911e47f59b36125a32f9 407 PIRSF PIRSF001413 1 403 7.6E-172 T 13-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VEA_001499 8eb1e91a71f7911e47f59b36125a32f9 407 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 14 396 2.6E-164 T 13-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VEA_001499 8eb1e91a71f7911e47f59b36125a32f9 407 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 9 397 48.586 T 13-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VEA_001499 8eb1e91a71f7911e47f59b36125a32f9 407 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 87 101 - T 13-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VEA_001499 8eb1e91a71f7911e47f59b36125a32f9 407 Gene3D G3DSA:3.40.50.1100 61 390 3.3E-167 T 13-10-2018 VEA_001499 8eb1e91a71f7911e47f59b36125a32f9 407 SUPERFAMILY SSF53686 10 395 1.02E-132 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VEA_003489 20e14652133c13f285d4e701a9c09bd0 168 Gene3D G3DSA:1.25.40.20 2 168 4.6E-25 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily VEA_003489 20e14652133c13f285d4e701a9c09bd0 168 SUPERFAMILY SSF48403 11 165 4.51E-22 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily VEA_003489 20e14652133c13f285d4e701a9c09bd0 168 SMART SM00248 72 101 0.17 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 VEA_003489 20e14652133c13f285d4e701a9c09bd0 168 SMART SM00248 104 133 0.06 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 VEA_003489 20e14652133c13f285d4e701a9c09bd0 168 SMART SM00248 34 67 88.0 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 VEA_003489 20e14652133c13f285d4e701a9c09bd0 168 Pfam PF12796 Ankyrin repeats (3 copies) 43 134 1.4E-14 T 13-10-2018 IPR020683 Ankyrin repeat-containing domain VEA_003489 20e14652133c13f285d4e701a9c09bd0 168 PRINTS PR01415 Ankyrin repeat signature 120 134 4.7E-6 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 VEA_003489 20e14652133c13f285d4e701a9c09bd0 168 PRINTS PR01415 Ankyrin repeat signature 73 88 4.7E-6 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 VEA_001339 aa350c58170eca084adb8a6b17f0a7fe 54 ProSitePatterns PS01309 Uncharacterized protein family UPF0057 signature. 10 25 - T 13-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 VEA_001339 aa350c58170eca084adb8a6b17f0a7fe 54 Pfam PF01679 Proteolipid membrane potential modulator 6 52 9.4E-21 T 13-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 VEA_002025 a909fcd6bbd97c2a817942ce1a3b8a03 84 Gene3D G3DSA:1.20.20.10 1 77 1.2E-27 T 13-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_002025 a909fcd6bbd97c2a817942ce1a3b8a03 84 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 19 76 1.2E-30 T 13-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VEA_002025 a909fcd6bbd97c2a817942ce1a3b8a03 84 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 13-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_002025 a909fcd6bbd97c2a817942ce1a3b8a03 84 SUPERFAMILY SSF81333 3 78 1.7E-19 T 13-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily VEA_002025 a909fcd6bbd97c2a817942ce1a3b8a03 84 Pfam PF00137 ATP synthase subunit C 10 72 1.3E-10 T 13-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 VEA_002025 a909fcd6bbd97c2a817942ce1a3b8a03 84 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 13.874 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_002025 a909fcd6bbd97c2a817942ce1a3b8a03 84 PRINTS PR00124 ATP synthase C subunit signature 11 30 1.7E-6 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_002025 a909fcd6bbd97c2a817942ce1a3b8a03 84 PRINTS PR00124 ATP synthase C subunit signature 32 47 1.7E-6 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_002025 a909fcd6bbd97c2a817942ce1a3b8a03 84 PRINTS PR00124 ATP synthase C subunit signature 49 74 1.7E-6 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_002066 15c98e9ed4530de57f0ef6e161a9a1a2 305 SUPERFAMILY SSF102886 5 305 6.15E-137 T 13-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VEA_002066 15c98e9ed4530de57f0ef6e161a9a1a2 305 PRINTS PR00073 Coprogen oxidase signature 129 151 8.4E-70 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VEA_002066 15c98e9ed4530de57f0ef6e161a9a1a2 305 PRINTS PR00073 Coprogen oxidase signature 238 265 8.4E-70 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VEA_002066 15c98e9ed4530de57f0ef6e161a9a1a2 305 PRINTS PR00073 Coprogen oxidase signature 266 292 8.4E-70 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VEA_002066 15c98e9ed4530de57f0ef6e161a9a1a2 305 PRINTS PR00073 Coprogen oxidase signature 94 118 8.4E-70 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VEA_002066 15c98e9ed4530de57f0ef6e161a9a1a2 305 PRINTS PR00073 Coprogen oxidase signature 31 47 8.4E-70 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VEA_002066 15c98e9ed4530de57f0ef6e161a9a1a2 305 PRINTS PR00073 Coprogen oxidase signature 166 195 8.4E-70 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VEA_002066 15c98e9ed4530de57f0ef6e161a9a1a2 305 PIRSF PIRSF000166 2 305 3.4E-128 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VEA_002066 15c98e9ed4530de57f0ef6e161a9a1a2 305 Pfam PF01218 Coproporphyrinogen III oxidase 9 305 4.3E-131 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VEA_002066 15c98e9ed4530de57f0ef6e161a9a1a2 305 Gene3D G3DSA:3.40.1500.10 1 305 1.2E-136 T 13-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VEA_002066 15c98e9ed4530de57f0ef6e161a9a1a2 305 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 170 194 - T 13-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VEA_002066 15c98e9ed4530de57f0ef6e161a9a1a2 305 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 281 55.756 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VEA_004013 33de528e9ca77868c3049f48d4ac7b70 144 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 34 136 7.0E-44 T 13-10-2018 IPR039366 YscW/ExsB VEA_002692 3265689e83231e5f8fd6e4ba516cd266 142 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 7 139 3.0E-48 T 13-10-2018 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE VEA_002692 3265689e83231e5f8fd6e4ba516cd266 142 Pfam PF02657 Fe-S metabolism associated domain 21 139 1.7E-46 T 13-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like VEA_002692 3265689e83231e5f8fd6e4ba516cd266 142 Gene3D G3DSA:3.90.1010.10 1 141 1.8E-51 T 13-10-2018 VEA_002692 3265689e83231e5f8fd6e4ba516cd266 142 SUPERFAMILY SSF82649 4 141 1.46E-49 T 13-10-2018 VEA_004101 b2e15591b33f526e6d76bee3dd88d6cc 142 PIRSF PIRSF000714 2 139 7.3E-55 T 13-10-2018 IPR026026 Histidine triad hydrolase, Hint-type VEA_004101 b2e15591b33f526e6d76bee3dd88d6cc 142 Gene3D G3DSA:3.30.428.10 1 141 3.3E-45 T 13-10-2018 IPR036265 HIT-like superfamily VEA_004101 b2e15591b33f526e6d76bee3dd88d6cc 142 SUPERFAMILY SSF54197 3 133 5.1E-36 T 13-10-2018 IPR036265 HIT-like superfamily VEA_004101 b2e15591b33f526e6d76bee3dd88d6cc 142 Pfam PF01230 HIT domain 11 99 4.2E-19 T 13-10-2018 IPR001310 Histidine triad (HIT) protein VEA_001158 0a3d0f9702c45f011d30cf89e2d5f54a 314 SUPERFAMILY SSF51735 4 264 4.45E-33 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_001158 0a3d0f9702c45f011d30cf89e2d5f54a 314 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 212 1.2E-19 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VEA_001158 0a3d0f9702c45f011d30cf89e2d5f54a 314 Gene3D G3DSA:3.40.50.720 3 303 1.4E-27 T 13-10-2018 VEA_000241 55a0bd810b22317b42e7f41264a14b8b 204 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 7 175 3.8E-28 T 13-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_000241 55a0bd810b22317b42e7f41264a14b8b 204 Gene3D G3DSA:3.30.420.10 2 174 1.5E-48 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VEA_000241 55a0bd810b22317b42e7f41264a14b8b 204 SUPERFAMILY SSF53098 4 176 2.14E-52 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VEA_000241 55a0bd810b22317b42e7f41264a14b8b 204 Pfam PF00929 Exonuclease 8 163 9.3E-30 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VEA_000241 55a0bd810b22317b42e7f41264a14b8b 204 SMART SM00479 6 173 4.7E-41 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VEA_002731 423c3997908f97e26f8951cb59258f48 370 Gene3D G3DSA:3.30.470.20 186 268 1.6E-7 T 13-10-2018 VEA_002731 423c3997908f97e26f8951cb59258f48 370 Pfam PF02655 ATP-grasp domain 110 267 8.1E-7 T 13-10-2018 IPR003806 ATP-grasp fold, DUF201-type GO:0005524|GO:0046872 VEA_002731 423c3997908f97e26f8951cb59258f48 370 Gene3D G3DSA:3.30.1490.20 102 185 1.6E-7 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VEA_002731 423c3997908f97e26f8951cb59258f48 370 Gene3D G3DSA:3.40.50.20 3 101 1.6E-7 T 13-10-2018 VEA_002731 423c3997908f97e26f8951cb59258f48 370 SUPERFAMILY SSF56059 108 270 8.92E-9 T 13-10-2018 VEA_002731 423c3997908f97e26f8951cb59258f48 370 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 258 265 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VEA_001107 7197cdfbbcb8af6f2d249cde38934e89 686 Gene3D G3DSA:3.20.20.80 192 395 1.1E-55 T 13-10-2018 VEA_001107 7197cdfbbcb8af6f2d249cde38934e89 686 Pfam PF00128 Alpha amylase, catalytic domain 236 606 7.7E-52 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VEA_001107 7197cdfbbcb8af6f2d249cde38934e89 686 PIRSF PIRSF036917 1 685 0.0 T 13-10-2018 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 VEA_001107 7197cdfbbcb8af6f2d249cde38934e89 686 SUPERFAMILY SSF51445 189 655 1.16E-91 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VEA_001107 7197cdfbbcb8af6f2d249cde38934e89 686 Gene3D G3DSA:3.20.20.80 409 650 4.5E-38 T 13-10-2018 VEA_001107 7197cdfbbcb8af6f2d249cde38934e89 686 SMART SM00642 203 646 4.3E-93 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VEA_004237 77f8bf6d882eda4d3f77f88436ee19a7 183 Gene3D G3DSA:3.40.50.1000 2 183 3.2E-61 T 13-10-2018 IPR023214 HAD superfamily VEA_004237 77f8bf6d882eda4d3f77f88436ee19a7 183 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 5 154 1.6E-35 T 13-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 VEA_004237 77f8bf6d882eda4d3f77f88436ee19a7 183 SUPERFAMILY SSF56784 4 182 3.07E-49 T 13-10-2018 IPR036412 HAD-like superfamily VEA_004237 77f8bf6d882eda4d3f77f88436ee19a7 183 Pfam PF13242 HAD-hyrolase-like 107 176 3.4E-13 T 13-10-2018 VEA_004237 77f8bf6d882eda4d3f77f88436ee19a7 183 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 4 178 2.9E-80 T 13-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 VEA_004237 77f8bf6d882eda4d3f77f88436ee19a7 183 PIRSF PIRSF004682 1 183 1.8E-63 T 13-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 VEA_004237 77f8bf6d882eda4d3f77f88436ee19a7 183 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 152 3.1E-38 T 13-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 VEA_000283 a997576a70a8ccb19814937731453a6a 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.4E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000283 a997576a70a8ccb19814937731453a6a 295 Gene3D G3DSA:1.10.10.10 1 86 8.8E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000283 a997576a70a8ccb19814937731453a6a 295 Gene3D G3DSA:3.40.190.10 88 168 4.1E-5 T 13-10-2018 VEA_000283 a997576a70a8ccb19814937731453a6a 295 SUPERFAMILY SSF46785 4 81 2.99E-11 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000283 a997576a70a8ccb19814937731453a6a 295 SUPERFAMILY SSF53850 96 294 2.39E-10 T 13-10-2018 VEA_000283 a997576a70a8ccb19814937731453a6a 295 Gene3D G3DSA:3.40.190.10 169 244 4.1E-5 T 13-10-2018 VEA_003716 b043a806827dcbd7f592542a5aec3118 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 220 1.7E-13 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 VEA_003716 b043a806827dcbd7f592542a5aec3118 642 SMART SM00863 171 220 1.6E-18 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 VEA_003716 b043a806827dcbd7f592542a5aec3118 642 Gene3D G3DSA:3.40.50.800 533 642 8.3E-31 T 13-10-2018 IPR036621 Anticodon-binding domain superfamily VEA_003716 b043a806827dcbd7f592542a5aec3118 642 Gene3D G3DSA:3.30.54.20 131 188 5.4E-64 T 13-10-2018 VEA_003716 b043a806827dcbd7f592542a5aec3118 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 67 635 34.189 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VEA_003716 b043a806827dcbd7f592542a5aec3118 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 73 632 1.1E-241 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VEA_003716 b043a806827dcbd7f592542a5aec3118 642 SUPERFAMILY SSF81271 3 61 2.29E-15 T 13-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VEA_003716 b043a806827dcbd7f592542a5aec3118 642 SUPERFAMILY SSF55186 65 242 6.41E-65 T 13-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 VEA_003716 b043a806827dcbd7f592542a5aec3118 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 319 530 1.2E-49 T 13-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEA_003716 b043a806827dcbd7f592542a5aec3118 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 1.1E-53 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VEA_003716 b043a806827dcbd7f592542a5aec3118 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 465 493 1.1E-53 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VEA_003716 b043a806827dcbd7f592542a5aec3118 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 535 547 1.1E-53 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VEA_003716 b043a806827dcbd7f592542a5aec3118 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 1.1E-53 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VEA_003716 b043a806827dcbd7f592542a5aec3118 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 508 521 1.1E-53 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VEA_003716 b043a806827dcbd7f592542a5aec3118 642 Pfam PF03129 Anticodon binding domain 542 631 1.9E-21 T 13-10-2018 IPR004154 Anticodon-binding VEA_003716 b043a806827dcbd7f592542a5aec3118 642 SUPERFAMILY SSF55681 244 527 1.97E-99 T 13-10-2018 VEA_003716 b043a806827dcbd7f592542a5aec3118 642 Gene3D G3DSA:3.30.930.10 224 532 3.9E-129 T 13-10-2018 VEA_003716 b043a806827dcbd7f592542a5aec3118 642 Gene3D G3DSA:3.30.980.10 70 223 5.4E-64 T 13-10-2018 VEA_003716 b043a806827dcbd7f592542a5aec3118 642 Gene3D G3DSA:3.10.20.30 3 62 1.1E-22 T 13-10-2018 IPR012675 Beta-grasp domain superfamily VEA_003716 b043a806827dcbd7f592542a5aec3118 642 Pfam PF02824 TGS domain 4 61 9.8E-12 T 13-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 VEA_003716 b043a806827dcbd7f592542a5aec3118 642 SUPERFAMILY SSF52954 530 638 1.24E-31 T 13-10-2018 VEA_000184 c48f3025faef9a976854a5c9e6f5d452 802 Pfam PF12262 Bacterial virulence factor lipase N-terminal 1 271 5.7E-131 T 13-10-2018 IPR025920 Bacterial virulence factor lipase, N-terminal domain VEA_000184 c48f3025faef9a976854a5c9e6f5d452 802 SUPERFAMILY SSF53474 443 717 4.41E-11 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_000184 c48f3025faef9a976854a5c9e6f5d452 802 TIGRFAM TIGR03502 lipase_Pla1_cef: extracellular lipase, Pla-1/cef family 1 789 4.8E-254 T 13-10-2018 IPR020009 Extracellular lipase, Pla-1/cef family VEA_000184 c48f3025faef9a976854a5c9e6f5d452 802 Gene3D G3DSA:3.40.50.1820 427 610 3.4E-21 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_003703 10edee3ba40e44b663adf2397f97c8c5 98 Pfam PF00216 Bacterial DNA-binding protein 3 91 2.0E-31 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VEA_003703 10edee3ba40e44b663adf2397f97c8c5 98 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 5.9E-17 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VEA_003703 10edee3ba40e44b663adf2397f97c8c5 98 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 5.9E-17 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VEA_003703 10edee3ba40e44b663adf2397f97c8c5 98 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 5.9E-17 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VEA_003703 10edee3ba40e44b663adf2397f97c8c5 98 SMART SM00411 3 92 1.6E-40 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VEA_003703 10edee3ba40e44b663adf2397f97c8c5 98 Gene3D G3DSA:4.10.520.10 1 97 7.5E-38 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VEA_003703 10edee3ba40e44b663adf2397f97c8c5 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 94 1.3E-50 T 13-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 VEA_003703 10edee3ba40e44b663adf2397f97c8c5 98 SUPERFAMILY SSF47729 3 95 3.68E-32 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VEA_003703 10edee3ba40e44b663adf2397f97c8c5 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 30.499 T 13-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 VEA_003703 10edee3ba40e44b663adf2397f97c8c5 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 13-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VEA_003803 3112868d59e58ae33b28f2141b7d390e 476 SUPERFAMILY SSF161070 10 457 8.37E-129 T 13-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 VEA_003803 3112868d59e58ae33b28f2141b7d390e 476 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 18 39 8.0E-13 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEA_003803 3112868d59e58ae33b28f2141b7d390e 476 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 47 66 8.0E-13 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEA_003803 3112868d59e58ae33b28f2141b7d390e 476 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 315 335 8.0E-13 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEA_003803 3112868d59e58ae33b28f2141b7d390e 476 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 91 117 8.0E-13 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEA_003803 3112868d59e58ae33b28f2141b7d390e 476 Pfam PF00209 Sodium:neurotransmitter symporter family 150 447 2.0E-32 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEA_003803 3112868d59e58ae33b28f2141b7d390e 476 Pfam PF00209 Sodium:neurotransmitter symporter family 10 120 2.5E-22 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEA_003803 3112868d59e58ae33b28f2141b7d390e 476 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 34 48 - T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEA_000957 5b83caddbc7dffd7816277e499ac2bf3 147 Pfam PF07681 DoxX 18 103 6.9E-24 T 13-10-2018 IPR032808 DoxX family VEA_000495 8ae31ac63b70de309a25e8955f9417fb 663 Pfam PF02780 Transketolase, C-terminal domain 539 654 2.1E-21 T 13-10-2018 IPR033248 Transketolase, C-terminal domain VEA_000495 8ae31ac63b70de309a25e8955f9417fb 663 SMART SM00861 353 524 3.6E-66 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VEA_000495 8ae31ac63b70de309a25e8955f9417fb 663 Pfam PF02779 Transketolase, pyrimidine binding domain 353 523 3.8E-47 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VEA_000495 8ae31ac63b70de309a25e8955f9417fb 663 ProSitePatterns PS00801 Transketolase signature 1. 11 31 - T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VEA_000495 8ae31ac63b70de309a25e8955f9417fb 663 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 332 2.4E-167 T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VEA_000495 8ae31ac63b70de309a25e8955f9417fb 663 Gene3D G3DSA:3.40.50.920 537 663 3.4E-46 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VEA_000495 8ae31ac63b70de309a25e8955f9417fb 663 SUPERFAMILY SSF52518 5 328 4.82E-121 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VEA_000495 8ae31ac63b70de309a25e8955f9417fb 663 ProSitePatterns PS00802 Transketolase signature 2. 466 482 - T 13-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VEA_000495 8ae31ac63b70de309a25e8955f9417fb 663 Gene3D G3DSA:3.40.50.970 2 324 5.3E-132 T 13-10-2018 VEA_000495 8ae31ac63b70de309a25e8955f9417fb 663 SUPERFAMILY SSF52922 532 663 2.62E-45 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VEA_000495 8ae31ac63b70de309a25e8955f9417fb 663 Gene3D G3DSA:3.40.50.970 325 536 3.0E-84 T 13-10-2018 VEA_000495 8ae31ac63b70de309a25e8955f9417fb 663 SUPERFAMILY SSF52518 333 525 4.05E-67 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VEA_000495 8ae31ac63b70de309a25e8955f9417fb 663 TIGRFAM TIGR00232 tktlase_bact: transketolase 6 662 0.0 T 13-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 VEA_004376 aed0a466ae1cc1ba4af186085ef453ef 258 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 3 227 3.9E-114 T 13-10-2018 IPR022488 Polyphosphate kinase-2-related VEA_004376 aed0a466ae1cc1ba4af186085ef453ef 258 PIRSF PIRSF028756 1 258 6.3E-135 T 13-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 VEA_004376 aed0a466ae1cc1ba4af186085ef453ef 258 Gene3D G3DSA:3.40.50.300 1 240 2.9E-102 T 13-10-2018 VEA_004376 aed0a466ae1cc1ba4af186085ef453ef 258 SUPERFAMILY SSF52540 35 223 1.46E-31 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_004376 aed0a466ae1cc1ba4af186085ef453ef 258 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 3 228 6.3E-118 T 13-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 VEA_000518 1cb7bd39d2e44206170dd668e850d1e2 115 PIRSF PIRSF028226 1 115 1.6E-57 T 13-10-2018 IPR014176 Phasin, subfamily 3 VEA_000518 1cb7bd39d2e44206170dd668e850d1e2 115 TIGRFAM TIGR02809 phasin_3: phasin family protein 4 113 1.2E-55 T 13-10-2018 IPR014176 Phasin, subfamily 3 VEA_000518 1cb7bd39d2e44206170dd668e850d1e2 115 Pfam PF09361 Phasin protein 8 108 9.8E-21 T 13-10-2018 IPR018968 Phasin VEA_003930 6aa068af7366f9d500a3056bb9657751 248 SUPERFAMILY SSF50630 107 242 8.44E-42 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily VEA_003930 6aa068af7366f9d500a3056bb9657751 248 Pfam PF05618 Putative ATP-dependant zinc protease 107 244 3.3E-47 T 13-10-2018 VEA_003930 6aa068af7366f9d500a3056bb9657751 248 Gene3D G3DSA:2.40.70.10 104 235 8.4E-42 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily VEA_002592 c5c617c2dcbf5a351b3f082b23f81b04 113 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 113 35.764 T 13-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 VEA_002592 c5c617c2dcbf5a351b3f082b23f81b04 113 Gene3D G3DSA:2.60.300.12 7 113 1.6E-31 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VEA_002592 c5c617c2dcbf5a351b3f082b23f81b04 113 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 94 111 - T 13-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 VEA_002592 c5c617c2dcbf5a351b3f082b23f81b04 113 SUPERFAMILY SSF89360 7 99 3.53E-29 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VEA_002592 c5c617c2dcbf5a351b3f082b23f81b04 113 Pfam PF01521 Iron-sulphur cluster biosynthesis 8 108 1.5E-17 T 13-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 VEA_002592 c5c617c2dcbf5a351b3f082b23f81b04 113 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 113 2.7E-36 T 13-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 VEA_002443 b16f078c141c95f31bd4822607eb7b75 541 SMART SM01049 30 124 1.6E-19 T 13-10-2018 IPR033480 Single Cache domain 2 VEA_002443 b16f078c141c95f31bd4822607eb7b75 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 3.0E-25 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEA_002443 b16f078c141c95f31bd4822607eb7b75 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 402 3.0E-25 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEA_002443 b16f078c141c95f31bd4822607eb7b75 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 3 28 3.0E-25 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEA_002443 b16f078c141c95f31bd4822607eb7b75 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 502 1.8E-42 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_002443 b16f078c141c95f31bd4822607eb7b75 541 SMART SM00283 277 538 1.0E-69 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_002443 b16f078c141c95f31bd4822607eb7b75 541 SUPERFAMILY SSF58104 244 539 1.23E-69 T 13-10-2018 VEA_002443 b16f078c141c95f31bd4822607eb7b75 541 Pfam PF17200 Single Cache domain 2 36 185 1.2E-33 T 13-10-2018 IPR033480 Single Cache domain 2 VEA_002443 b16f078c141c95f31bd4822607eb7b75 541 Gene3D G3DSA:3.30.450.20 34 182 7.2E-31 T 13-10-2018 VEA_002443 b16f078c141c95f31bd4822607eb7b75 541 Gene3D G3DSA:1.10.287.950 218 540 1.1E-65 T 13-10-2018 VEA_001329 bef647e54a7091feb18af77d46976de9 515 SUPERFAMILY SSF160964 15 261 2.62E-82 T 13-10-2018 VEA_001329 bef647e54a7091feb18af77d46976de9 515 Gene3D G3DSA:1.20.58.370 7 96 2.5E-33 T 13-10-2018 IPR035277 MalF, N-terminal VEA_001329 bef647e54a7091feb18af77d46976de9 515 Gene3D G3DSA:3.10.650.10 99 269 3.8E-52 T 13-10-2018 VEA_001329 bef647e54a7091feb18af77d46976de9 515 SUPERFAMILY SSF161098 264 505 2.88E-57 T 13-10-2018 IPR035906 MetI-like superfamily VEA_001329 bef647e54a7091feb18af77d46976de9 515 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 298 504 1.1E-15 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_001329 bef647e54a7091feb18af77d46976de9 515 Gene3D G3DSA:1.10.3720.10 271 514 2.5E-68 T 13-10-2018 IPR035906 MetI-like superfamily VEA_001329 bef647e54a7091feb18af77d46976de9 515 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 101 261 8.9E-60 T 13-10-2018 IPR029345 Maltose transport system permease protein MalF, P2 domain VEA_001329 bef647e54a7091feb18af77d46976de9 515 Gene3D G3DSA:2.40.430.10 119 205 3.8E-52 T 13-10-2018 VEA_002886 f8a36234fb080c624ad48194c2b88e00 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.271 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family VEA_002886 f8a36234fb080c624ad48194c2b88e00 109 PIRSF PIRSF004555 3 109 9.5E-40 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family VEA_002886 f8a36234fb080c624ad48194c2b88e00 109 SUPERFAMILY SSF82607 11 103 1.96E-36 T 13-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily VEA_002886 f8a36234fb080c624ad48194c2b88e00 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 6.6E-40 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family VEA_002886 f8a36234fb080c624ad48194c2b88e00 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 100 3.0E-35 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family VEA_002886 f8a36234fb080c624ad48194c2b88e00 109 Gene3D G3DSA:3.30.1310.10 1 109 8.4E-48 T 13-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily VEA_002265 391532f5348109d8e4f7b0b748c6f8ff 211 Pfam PF08238 Sel1 repeat 109 143 1.3E-4 T 13-10-2018 IPR006597 Sel1-like repeat VEA_002265 391532f5348109d8e4f7b0b748c6f8ff 211 Pfam PF08238 Sel1 repeat 74 106 0.19 T 13-10-2018 IPR006597 Sel1-like repeat VEA_002265 391532f5348109d8e4f7b0b748c6f8ff 211 SUPERFAMILY SSF81901 64 177 8.24E-22 T 13-10-2018 VEA_002265 391532f5348109d8e4f7b0b748c6f8ff 211 Gene3D G3DSA:1.25.40.10 34 211 8.9E-26 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_002265 391532f5348109d8e4f7b0b748c6f8ff 211 SMART SM00671 72 107 0.011 T 13-10-2018 IPR006597 Sel1-like repeat VEA_002265 391532f5348109d8e4f7b0b748c6f8ff 211 SMART SM00671 144 179 38.0 T 13-10-2018 IPR006597 Sel1-like repeat VEA_002265 391532f5348109d8e4f7b0b748c6f8ff 211 SMART SM00671 108 143 3.2E-5 T 13-10-2018 IPR006597 Sel1-like repeat VEA_004439 d01a90693a2aaee4b3c4fbb3412e25e0 579 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 20 575 6.4E-159 T 13-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 VEA_004439 d01a90693a2aaee4b3c4fbb3412e25e0 579 Gene3D G3DSA:3.90.1640.30 45 323 1.5E-89 T 13-10-2018 VEA_004439 d01a90693a2aaee4b3c4fbb3412e25e0 579 Gene3D G3DSA:3.10.310.30 325 456 2.1E-30 T 13-10-2018 VEA_004439 d01a90693a2aaee4b3c4fbb3412e25e0 579 Pfam PF01368 DHH family 71 205 2.5E-9 T 13-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VEA_004439 d01a90693a2aaee4b3c4fbb3412e25e0 579 Pfam PF02272 DHHA1 domain 319 451 2.0E-26 T 13-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 VEA_004439 d01a90693a2aaee4b3c4fbb3412e25e0 579 SUPERFAMILY SSF64182 45 464 8.63E-120 T 13-10-2018 IPR038763 DHH phosphoesterase superfamily VEA_004416 1f1dd99949f7b8acfcb3bf9199d64b3b 321 Gene3D G3DSA:3.40.1010.20 101 202 2.0E-108 T 13-10-2018 VEA_004416 1f1dd99949f7b8acfcb3bf9199d64b3b 321 Pfam PF02401 LytB protein 7 288 1.7E-92 T 13-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 VEA_004416 1f1dd99949f7b8acfcb3bf9199d64b3b 321 Gene3D G3DSA:3.40.50.11270 16 100 2.0E-108 T 13-10-2018 VEA_004416 1f1dd99949f7b8acfcb3bf9199d64b3b 321 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 5 292 38.216 T 13-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 VEA_004416 1f1dd99949f7b8acfcb3bf9199d64b3b 321 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 6 290 2.0E-98 T 13-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 VEA_004416 1f1dd99949f7b8acfcb3bf9199d64b3b 321 Gene3D G3DSA:3.40.1010.20 10 287 2.0E-108 T 13-10-2018 VEA_002032 316eb2fd89fc6b9e1f5cc4f6f25606a6 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 392 426 1.7E-7 T 13-10-2018 IPR001451 Hexapeptide repeat VEA_002032 316eb2fd89fc6b9e1f5cc4f6f25606a6 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 265 296 1.5E-5 T 13-10-2018 IPR001451 Hexapeptide repeat VEA_002032 316eb2fd89fc6b9e1f5cc4f6f25606a6 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 314 348 9.0E-4 T 13-10-2018 IPR001451 Hexapeptide repeat VEA_002032 316eb2fd89fc6b9e1f5cc4f6f25606a6 453 Gene3D G3DSA:2.160.10.10 225 453 5.5E-71 T 13-10-2018 VEA_002032 316eb2fd89fc6b9e1f5cc4f6f25606a6 453 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 42.497 T 13-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 VEA_002032 316eb2fd89fc6b9e1f5cc4f6f25606a6 453 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 451 8.8E-205 T 13-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 VEA_002032 316eb2fd89fc6b9e1f5cc4f6f25606a6 453 Pfam PF12804 MobA-like NTP transferase domain 5 121 5.1E-22 T 13-10-2018 IPR025877 MobA-like NTP transferase VEA_002032 316eb2fd89fc6b9e1f5cc4f6f25606a6 453 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 400 428 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VEA_002032 316eb2fd89fc6b9e1f5cc4f6f25606a6 453 SUPERFAMILY SSF51161 252 434 3.49E-51 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily VEA_002032 316eb2fd89fc6b9e1f5cc4f6f25606a6 453 SUPERFAMILY SSF53448 1 249 1.59E-62 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEA_002032 316eb2fd89fc6b9e1f5cc4f6f25606a6 453 Gene3D G3DSA:3.90.550.10 1 224 3.5E-67 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEA_003986 dd98d193d352466a08a4b7197a13b702 335 SUPERFAMILY SSF52540 50 163 3.45E-10 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003986 dd98d193d352466a08a4b7197a13b702 335 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 23 325 6.5E-95 T 13-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 VEA_003986 dd98d193d352466a08a4b7197a13b702 335 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 324 40.589 T 13-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 VEA_003986 dd98d193d352466a08a4b7197a13b702 335 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 18 323 1.2E-111 T 13-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 VEA_000046 4b7408413dd4613ca6b6655d8c72e3a7 334 PIRSF PIRSF017617 1 334 5.6E-133 T 13-10-2018 IPR023603 Threonine aldolase VEA_000046 4b7408413dd4613ca6b6655d8c72e3a7 334 Gene3D G3DSA:3.90.1150.10 244 334 3.4E-24 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEA_000046 4b7408413dd4613ca6b6655d8c72e3a7 334 SUPERFAMILY SSF53383 1 332 2.29E-117 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_000046 4b7408413dd4613ca6b6655d8c72e3a7 334 Gene3D G3DSA:3.40.640.10 1 243 7.2E-97 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_000046 4b7408413dd4613ca6b6655d8c72e3a7 334 Pfam PF01212 Beta-eliminating lyase 2 283 8.4E-100 T 13-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 VEA_000897 4a17e67f26637db319813bee76837b6d 896 Gene3D G3DSA:1.10.287.100 276 314 2.4E-13 T 13-10-2018 VEA_000897 4a17e67f26637db319813bee76837b6d 896 SUPERFAMILY SSF48208 326 891 4.54E-67 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VEA_000897 4a17e67f26637db319813bee76837b6d 896 Gene3D G3DSA:2.70.98.50 35 275 2.2E-81 T 13-10-2018 VEA_004153 5dfff759e48f58aaa6c06f9875c7dcb3 690 Gene3D G3DSA:2.20.70.80 412 452 1.0E-20 T 13-10-2018 VEA_004153 5dfff759e48f58aaa6c06f9875c7dcb3 690 Pfam PF12826 Helix-hairpin-helix motif 531 594 6.5E-24 T 13-10-2018 VEA_004153 5dfff759e48f58aaa6c06f9875c7dcb3 690 SUPERFAMILY SSF56091 24 337 7.52E-125 T 13-10-2018 VEA_004153 5dfff759e48f58aaa6c06f9875c7dcb3 690 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 136 165 - T 13-10-2018 IPR018239 NAD-dependent DNA ligase, active site VEA_004153 5dfff759e48f58aaa6c06f9875c7dcb3 690 Hamap MF_01588 DNA ligase [ligA]. 23 689 54.268 T 13-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 VEA_004153 5dfff759e48f58aaa6c06f9875c7dcb3 690 Gene3D G3DSA:2.40.50.140 339 411 1.1E-34 T 13-10-2018 VEA_004153 5dfff759e48f58aaa6c06f9875c7dcb3 690 Gene3D G3DSA:1.10.150.20 527 603 5.2E-30 T 13-10-2018 VEA_004153 5dfff759e48f58aaa6c06f9875c7dcb3 690 PIRSF PIRSF001604 18 690 3.1E-257 T 13-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 VEA_004153 5dfff759e48f58aaa6c06f9875c7dcb3 690 SUPERFAMILY SSF47781 424 605 1.52E-62 T 13-10-2018 IPR010994 RuvA domain 2-like VEA_004153 5dfff759e48f58aaa6c06f9875c7dcb3 690 Gene3D G3DSA:1.10.287.610 22 89 1.1E-27 T 13-10-2018 VEA_004153 5dfff759e48f58aaa6c06f9875c7dcb3 690 Pfam PF14520 Helix-hairpin-helix domain 467 523 1.3E-5 T 13-10-2018 VEA_004153 5dfff759e48f58aaa6c06f9875c7dcb3 690 Gene3D G3DSA:1.10.150.20 453 526 1.5E-29 T 13-10-2018 VEA_004153 5dfff759e48f58aaa6c06f9875c7dcb3 690 Gene3D G3DSA:3.30.470.90 90 338 1.4E-103 T 13-10-2018 VEA_004153 5dfff759e48f58aaa6c06f9875c7dcb3 690 SUPERFAMILY SSF50249 339 420 9.25E-29 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_004153 5dfff759e48f58aaa6c06f9875c7dcb3 690 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 32 685 1.8E-269 T 13-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 VEA_004153 5dfff759e48f58aaa6c06f9875c7dcb3 690 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 25 339 3.0E-135 T 13-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 VEA_004153 5dfff759e48f58aaa6c06f9875c7dcb3 690 SMART SM00292 615 690 1.2E-10 T 13-10-2018 IPR001357 BRCT domain VEA_004153 5dfff759e48f58aaa6c06f9875c7dcb3 690 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 352 367 - T 13-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site VEA_004153 5dfff759e48f58aaa6c06f9875c7dcb3 690 SUPERFAMILY SSF52113 614 689 2.24E-18 T 13-10-2018 IPR036420 BRCT domain superfamily VEA_004153 5dfff759e48f58aaa6c06f9875c7dcb3 690 Gene3D G3DSA:3.40.50.10190 604 690 7.8E-27 T 13-10-2018 IPR036420 BRCT domain superfamily VEA_004153 5dfff759e48f58aaa6c06f9875c7dcb3 690 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 615 688 6.5E-14 T 13-10-2018 IPR001357 BRCT domain VEA_004153 5dfff759e48f58aaa6c06f9875c7dcb3 690 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 343 419 8.1E-36 T 13-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 VEA_004153 5dfff759e48f58aaa6c06f9875c7dcb3 690 SMART SM00532 24 469 2.4E-280 T 13-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 VEA_004153 5dfff759e48f58aaa6c06f9875c7dcb3 690 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 428 455 3.4E-12 T 13-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 VEA_004153 5dfff759e48f58aaa6c06f9875c7dcb3 690 SMART SM00278 501 520 11.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VEA_004153 5dfff759e48f58aaa6c06f9875c7dcb3 690 SMART SM00278 467 486 95.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VEA_004153 5dfff759e48f58aaa6c06f9875c7dcb3 690 SMART SM00278 565 584 270.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VEA_002992 d1a29f63b69484c7b27289e3e045f618 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 16.766 T 13-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002992 d1a29f63b69484c7b27289e3e045f618 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 2.4E-19 T 13-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002992 d1a29f63b69484c7b27289e3e045f618 56 Pfam PF01783 Ribosomal L32p protein family 2 56 1.5E-19 T 13-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002992 d1a29f63b69484c7b27289e3e045f618 56 SUPERFAMILY SSF57829 2 55 1.53E-17 T 13-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 VEA_002833 ed7f0576898261af5bc9c4ec32d232ec 126 Pfam PF00072 Response regulator receiver domain 7 119 2.2E-32 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_002833 ed7f0576898261af5bc9c4ec32d232ec 126 SMART SM00448 5 119 1.6E-35 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_002833 ed7f0576898261af5bc9c4ec32d232ec 126 Gene3D G3DSA:3.40.50.2300 1 126 8.7E-41 T 13-10-2018 VEA_002833 ed7f0576898261af5bc9c4ec32d232ec 126 SUPERFAMILY SSF52172 3 124 2.7E-38 T 13-10-2018 IPR011006 CheY-like superfamily VEA_004073 c3b7a79beb687b7cf3d6566aa1f37b23 780 Pfam PF03176 MMPL family 72 414 4.2E-12 T 13-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 VEA_004073 c3b7a79beb687b7cf3d6566aa1f37b23 780 SUPERFAMILY SSF82866 228 408 4.71E-21 T 13-10-2018 VEA_004073 c3b7a79beb687b7cf3d6566aa1f37b23 780 SUPERFAMILY SSF82866 601 771 1.57E-20 T 13-10-2018 VEA_003651 fe6cb584ef72f98241d54ff3496a0f2d 219 PIRSF PIRSF028063 1 219 3.2E-140 T 13-10-2018 IPR014538 Uncharacterised conserved protein, topoisomerase zinc finger VEA_003651 fe6cb584ef72f98241d54ff3496a0f2d 219 Pfam PF10881 Protein of unknown function (DUF2726) 38 160 7.5E-34 T 13-10-2018 IPR024402 Domain of unknown function DUF2726 VEA_002857 34d2d08e3703e9d601d99fbc65983d4d 703 Gene3D G3DSA:3.40.50.720 311 496 2.0E-58 T 13-10-2018 VEA_002857 34d2d08e3703e9d601d99fbc65983d4d 703 SUPERFAMILY SSF48179 610 703 2.98E-26 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VEA_002857 34d2d08e3703e9d601d99fbc65983d4d 703 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 1 703 52.96 T 13-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VEA_002857 34d2d08e3703e9d601d99fbc65983d4d 703 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 494 587 3.5E-25 T 13-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VEA_002857 34d2d08e3703e9d601d99fbc65983d4d 703 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 616 690 9.0E-5 T 13-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VEA_002857 34d2d08e3703e9d601d99fbc65983d4d 703 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 105 125 - T 13-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 VEA_002857 34d2d08e3703e9d601d99fbc65983d4d 703 SUPERFAMILY SSF52096 3 304 1.01E-66 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEA_002857 34d2d08e3703e9d601d99fbc65983d4d 703 Gene3D G3DSA:1.10.1040.50 497 698 4.0E-71 T 13-10-2018 VEA_002857 34d2d08e3703e9d601d99fbc65983d4d 703 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 6 703 0.0 T 13-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VEA_002857 34d2d08e3703e9d601d99fbc65983d4d 703 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 312 491 1.3E-54 T 13-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VEA_002857 34d2d08e3703e9d601d99fbc65983d4d 703 SUPERFAMILY SSF48179 494 593 4.08E-28 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VEA_002857 34d2d08e3703e9d601d99fbc65983d4d 703 Pfam PF00378 Enoyl-CoA hydratase/isomerase 25 217 2.3E-39 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 VEA_002857 34d2d08e3703e9d601d99fbc65983d4d 703 SUPERFAMILY SSF51735 311 491 8.85E-48 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_002857 34d2d08e3703e9d601d99fbc65983d4d 703 Gene3D G3DSA:3.90.226.10 1 307 4.8E-97 T 13-10-2018 VEA_002857 34d2d08e3703e9d601d99fbc65983d4d 703 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 491 516 - T 13-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VEA_000015 0b0a77116866317b014f60953981d4ab 430 TIGRFAM TIGR03350 type_VI_ompA: type VI secretion system peptidoglycan-associated domain 290 426 4.3E-44 T 13-10-2018 IPR017733 Type VI secretion system peptidoglycan-associated domain VEA_000015 0b0a77116866317b014f60953981d4ab 430 Gene3D G3DSA:3.30.1330.60 276 429 4.4E-39 T 13-10-2018 IPR036737 OmpA-like domain superfamily VEA_000015 0b0a77116866317b014f60953981d4ab 430 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 49 258 1.4E-65 T 13-10-2018 IPR017732 Type IV / VI secretion system, DotU VEA_000015 0b0a77116866317b014f60953981d4ab 430 Pfam PF00691 OmpA family 322 420 7.6E-16 T 13-10-2018 IPR006665 OmpA-like domain VEA_000015 0b0a77116866317b014f60953981d4ab 430 Pfam PF09850 Type VI secretion system protein DotU 50 252 6.0E-55 T 13-10-2018 IPR017732 Type IV / VI secretion system, DotU VEA_000015 0b0a77116866317b014f60953981d4ab 430 Gene3D G3DSA:1.25.40.590 47 204 2.6E-48 T 13-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily VEA_000015 0b0a77116866317b014f60953981d4ab 430 SUPERFAMILY SSF103088 310 426 7.32E-26 T 13-10-2018 IPR036737 OmpA-like domain superfamily VEA_001913 03be620b2229b7d515d9a4ae6e8e90fc 180 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 173 16.603 T 13-10-2018 IPR007336 Der GTPase activator GO:0005096 VEA_001913 03be620b2229b7d515d9a4ae6e8e90fc 180 Pfam PF04220 Der GTPase activator (YihI) 21 170 5.5E-45 T 13-10-2018 IPR007336 Der GTPase activator GO:0005096 VEA_003591 8b3c2e3bf4e8ec987bdb619466c84688 489 Pfam PF00990 Diguanylate cyclase, GGDEF domain 332 481 7.2E-40 T 13-10-2018 IPR000160 GGDEF domain VEA_003591 8b3c2e3bf4e8ec987bdb619466c84688 489 Gene3D G3DSA:3.30.70.270 325 487 8.4E-49 T 13-10-2018 VEA_003591 8b3c2e3bf4e8ec987bdb619466c84688 489 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 328 484 1.2E-46 T 13-10-2018 IPR000160 GGDEF domain VEA_003591 8b3c2e3bf4e8ec987bdb619466c84688 489 SUPERFAMILY SSF55073 336 483 2.35E-42 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_003591 8b3c2e3bf4e8ec987bdb619466c84688 489 Gene3D G3DSA:3.30.450.20 124 245 2.7E-14 T 13-10-2018 VEA_003591 8b3c2e3bf4e8ec987bdb619466c84688 489 Pfam PF02743 Cache domain 17 232 1.6E-23 T 13-10-2018 IPR033479 Double Cache domain 1 VEA_003591 8b3c2e3bf4e8ec987bdb619466c84688 489 SMART SM00267 320 485 1.4E-49 T 13-10-2018 IPR000160 GGDEF domain VEA_003591 8b3c2e3bf4e8ec987bdb619466c84688 489 SUPERFAMILY SSF103190 149 231 7.46E-13 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VEA_003591 8b3c2e3bf4e8ec987bdb619466c84688 489 SUPERFAMILY SSF103190 42 147 4.32E-6 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VEA_000439 878dff3ec63dd2d305aec47b0bff3def 136 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 6 136 4.8E-38 T 13-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein VEA_000439 878dff3ec63dd2d305aec47b0bff3def 136 Pfam PF04965 Gene 25-like lysozyme 28 115 5.9E-18 T 13-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD VEA_000439 878dff3ec63dd2d305aec47b0bff3def 136 SUPERFAMILY SSF160719 28 131 2.48E-20 T 13-10-2018 VEA_000439 878dff3ec63dd2d305aec47b0bff3def 136 Gene3D G3DSA:3.10.450.40 6 117 1.8E-11 T 13-10-2018 VEA_002685 8bdbb35f75a610a1e615517e16a1a3a6 1224 Pfam PF13361 UvrD-like helicase C-terminal domain 456 839 1.5E-17 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VEA_002685 8bdbb35f75a610a1e615517e16a1a3a6 1224 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 22 1206 0.0 T 13-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 VEA_002685 8bdbb35f75a610a1e615517e16a1a3a6 1224 Gene3D G3DSA:3.40.50.300 22 449 7.5E-160 T 13-10-2018 VEA_002685 8bdbb35f75a610a1e615517e16a1a3a6 1224 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 20 1207 22.996 T 13-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 VEA_002685 8bdbb35f75a610a1e615517e16a1a3a6 1224 Gene3D G3DSA:3.90.320.10 915 1213 2.3E-102 T 13-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal VEA_002685 8bdbb35f75a610a1e615517e16a1a3a6 1224 SUPERFAMILY SSF52540 28 867 2.66E-110 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002685 8bdbb35f75a610a1e615517e16a1a3a6 1224 SUPERFAMILY SSF52980 925 1208 5.15E-87 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VEA_002685 8bdbb35f75a610a1e615517e16a1a3a6 1224 Pfam PF00580 UvrD/REP helicase N-terminal domain 24 449 2.7E-59 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 VEA_002685 8bdbb35f75a610a1e615517e16a1a3a6 1224 Pfam PF12705 PD-(D/E)XK nuclease superfamily 982 1207 2.4E-7 T 13-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type VEA_002685 8bdbb35f75a610a1e615517e16a1a3a6 1224 Gene3D G3DSA:1.10.486.10 599 753 8.1E-156 T 13-10-2018 VEA_002685 8bdbb35f75a610a1e615517e16a1a3a6 1224 Gene3D G3DSA:1.10.3170.10 170 362 7.5E-160 T 13-10-2018 VEA_002685 8bdbb35f75a610a1e615517e16a1a3a6 1224 Gene3D G3DSA:3.40.50.300 458 870 8.1E-156 T 13-10-2018 VEA_000021 4e3f5042378c8949be68c52df7009c3a 497 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 21 493 1.1E-201 T 13-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath VEA_000021 4e3f5042378c8949be68c52df7009c3a 497 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 64 493 9.4E-185 T 13-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath VEA_001429 b3c5c18bde03ecf33faa4126ef455b83 606 SUPERFAMILY SSF141868 358 601 2.48E-71 T 13-10-2018 IPR035919 EAL domain superfamily VEA_001429 b3c5c18bde03ecf33faa4126ef455b83 606 Gene3D G3DSA:3.30.70.270 171 343 1.5E-35 T 13-10-2018 VEA_001429 b3c5c18bde03ecf33faa4126ef455b83 606 Pfam PF00990 Diguanylate cyclase, GGDEF domain 178 324 9.6E-28 T 13-10-2018 IPR000160 GGDEF domain VEA_001429 b3c5c18bde03ecf33faa4126ef455b83 606 Pfam PF00563 EAL domain 353 588 1.6E-61 T 13-10-2018 IPR001633 EAL domain VEA_001429 b3c5c18bde03ecf33faa4126ef455b83 606 SMART SM00267 166 330 6.3E-27 T 13-10-2018 IPR000160 GGDEF domain VEA_001429 b3c5c18bde03ecf33faa4126ef455b83 606 SUPERFAMILY SSF55781 24 142 5.1E-5 T 13-10-2018 VEA_001429 b3c5c18bde03ecf33faa4126ef455b83 606 SUPERFAMILY SSF55073 182 332 2.28E-31 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_001429 b3c5c18bde03ecf33faa4126ef455b83 606 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 177 329 2.5E-26 T 13-10-2018 IPR000160 GGDEF domain VEA_001429 b3c5c18bde03ecf33faa4126ef455b83 606 SMART SM00052 341 593 2.6E-74 T 13-10-2018 IPR001633 EAL domain VEA_001429 b3c5c18bde03ecf33faa4126ef455b83 606 Gene3D G3DSA:3.20.20.450 344 606 6.2E-74 T 13-10-2018 IPR035919 EAL domain superfamily VEA_003972 36a6c73a66e69610c50ff25901a0181b 256 SMART SM00079 26 251 4.8E-4 T 13-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 VEA_003972 36a6c73a66e69610c50ff25901a0181b 256 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 250 2.0E-62 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEA_003972 36a6c73a66e69610c50ff25901a0181b 256 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 49 62 - T 13-10-2018 IPR018313 Solute-binding protein family 3, conserved site VEA_003972 36a6c73a66e69610c50ff25901a0181b 256 SMART SM00062 26 252 1.0E-70 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEA_003972 36a6c73a66e69610c50ff25901a0181b 256 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 7 249 1.7E-81 T 13-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 VEA_003972 36a6c73a66e69610c50ff25901a0181b 256 Gene3D G3DSA:3.40.190.10 112 209 4.0E-73 T 13-10-2018 VEA_003972 36a6c73a66e69610c50ff25901a0181b 256 Gene3D G3DSA:3.40.190.10 28 248 4.0E-73 T 13-10-2018 VEA_003972 36a6c73a66e69610c50ff25901a0181b 256 SUPERFAMILY SSF53850 1 253 3.02E-70 T 13-10-2018 VEA_002521 dce4ce370bca5a33d392eaa74cfa35d3 860 Gene3D G3DSA:3.10.310.40 749 857 2.4E-34 T 13-10-2018 VEA_002521 dce4ce370bca5a33d392eaa74cfa35d3 860 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 860 198.801 T 13-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 VEA_002521 dce4ce370bca5a33d392eaa74cfa35d3 860 Gene3D G3DSA:3.30.930.10 2 251 3.3E-120 T 13-10-2018 VEA_002521 dce4ce370bca5a33d392eaa74cfa35d3 860 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 652 695 1.1E-18 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 VEA_002521 dce4ce370bca5a33d392eaa74cfa35d3 860 SUPERFAMILY SSF55186 551 710 4.71E-54 T 13-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 VEA_002521 dce4ce370bca5a33d392eaa74cfa35d3 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 4.6E-31 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VEA_002521 dce4ce370bca5a33d392eaa74cfa35d3 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 208 219 4.6E-31 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VEA_002521 dce4ce370bca5a33d392eaa74cfa35d3 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 281 297 4.6E-31 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VEA_002521 dce4ce370bca5a33d392eaa74cfa35d3 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 235 248 4.6E-31 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VEA_002521 dce4ce370bca5a33d392eaa74cfa35d3 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 305 318 4.6E-31 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VEA_002521 dce4ce370bca5a33d392eaa74cfa35d3 860 Gene3D G3DSA:2.40.30.130 463 551 6.5E-10 T 13-10-2018 VEA_002521 dce4ce370bca5a33d392eaa74cfa35d3 860 SUPERFAMILY SSF101353 255 462 7.19E-60 T 13-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 VEA_002521 dce4ce370bca5a33d392eaa74cfa35d3 860 SUPERFAMILY SSF50447 453 551 3.5E-18 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VEA_002521 dce4ce370bca5a33d392eaa74cfa35d3 860 Gene3D G3DSA:3.30.980.10 562 696 1.3E-51 T 13-10-2018 VEA_002521 dce4ce370bca5a33d392eaa74cfa35d3 860 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 839 0.0 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VEA_002521 dce4ce370bca5a33d392eaa74cfa35d3 860 SMART SM00863 652 695 3.9E-22 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 VEA_002521 dce4ce370bca5a33d392eaa74cfa35d3 860 SUPERFAMILY SSF55681 3 254 1.49E-108 T 13-10-2018 VEA_002521 dce4ce370bca5a33d392eaa74cfa35d3 860 Pfam PF02272 DHHA1 domain 722 854 6.8E-28 T 13-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 VEA_002521 dce4ce370bca5a33d392eaa74cfa35d3 860 Pfam PF01411 tRNA synthetases class II (A) 7 555 2.1E-225 T 13-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 VEA_002521 dce4ce370bca5a33d392eaa74cfa35d3 860 Gene3D G3DSA:3.30.54.20 623 676 1.3E-51 T 13-10-2018 VEA_002392 601f70098684fa92e28b6819a4d4108e 969 SMART SM00490 519 603 2.7E-17 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_002392 601f70098684fa92e28b6819a4d4108e 969 Pfam PF00271 Helicase conserved C-terminal domain 494 603 9.5E-16 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_002392 601f70098684fa92e28b6819a4d4108e 969 Pfam PF00176 SNF2 family N-terminal domain 174 343 8.9E-15 T 13-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 VEA_002392 601f70098684fa92e28b6819a4d4108e 969 SUPERFAMILY SSF52540 127 378 1.46E-36 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002392 601f70098684fa92e28b6819a4d4108e 969 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 967 29.131 T 13-10-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 VEA_002392 601f70098684fa92e28b6819a4d4108e 969 Gene3D G3DSA:3.40.50.10810 631 713 2.7E-6 T 13-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily VEA_002392 601f70098684fa92e28b6819a4d4108e 969 Gene3D G3DSA:3.40.50.10810 150 430 2.5E-105 T 13-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily VEA_002392 601f70098684fa92e28b6819a4d4108e 969 Gene3D G3DSA:2.30.30.930 55 114 5.4E-26 T 13-10-2018 VEA_002392 601f70098684fa92e28b6819a4d4108e 969 SMART SM00487 150 342 3.8E-15 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEA_002392 601f70098684fa92e28b6819a4d4108e 969 SUPERFAMILY SSF52540 273 653 7.6E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002392 601f70098684fa92e28b6819a4d4108e 969 Pfam PF12137 RNA polymerase recycling family C-terminal 607 966 1.2E-147 T 13-10-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 VEA_002392 601f70098684fa92e28b6819a4d4108e 969 Gene3D G3DSA:3.30.360.80 714 786 3.4E-30 T 13-10-2018 VEA_002392 601f70098684fa92e28b6819a4d4108e 969 Gene3D G3DSA:3.40.50.300 431 630 6.4E-47 T 13-10-2018 VEA_002392 601f70098684fa92e28b6819a4d4108e 969 Gene3D G3DSA:2.30.30.140 1 53 4.9E-24 T 13-10-2018 VEA_003782 8da1be48ad037e1b8c38f5792210eceb 583 Gene3D G3DSA:3.40.50.300 1 167 1.1E-29 T 13-10-2018 VEA_003782 8da1be48ad037e1b8c38f5792210eceb 583 Pfam PF00271 Helicase conserved C-terminal domain 240 342 3.0E-13 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_003782 8da1be48ad037e1b8c38f5792210eceb 583 SMART SM00487 1 178 1.2E-14 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEA_003782 8da1be48ad037e1b8c38f5792210eceb 583 Gene3D G3DSA:3.40.50.300 209 367 3.1E-33 T 13-10-2018 VEA_003782 8da1be48ad037e1b8c38f5792210eceb 583 SUPERFAMILY SSF52540 48 362 1.64E-40 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003782 8da1be48ad037e1b8c38f5792210eceb 583 SMART SM00490 261 344 6.3E-10 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_003782 8da1be48ad037e1b8c38f5792210eceb 583 SUPERFAMILY SSF57829 425 465 2.75E-6 T 13-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 VEA_003782 8da1be48ad037e1b8c38f5792210eceb 583 Pfam PF04851 Type III restriction enzyme, res subunit 2 154 7.6E-24 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VEA_004129 7a478571e0ec05243ecb0e948d3ff768 378 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 374 3.4E-157 T 13-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 VEA_004129 7a478571e0ec05243ecb0e948d3ff768 378 Pfam PF01979 Amidohydrolase family 51 374 1.1E-35 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VEA_004129 7a478571e0ec05243ecb0e948d3ff768 378 SUPERFAMILY SSF51556 54 347 5.75E-102 T 13-10-2018 IPR032466 Metal-dependent hydrolase VEA_004129 7a478571e0ec05243ecb0e948d3ff768 378 Gene3D G3DSA:2.30.40.10 6 373 1.1E-142 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VEA_004129 7a478571e0ec05243ecb0e948d3ff768 378 SUPERFAMILY SSF51338 1 53 4.61E-19 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VEA_004129 7a478571e0ec05243ecb0e948d3ff768 378 PIRSF PIRSF038994 1 378 1.4E-122 T 13-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 VEA_004129 7a478571e0ec05243ecb0e948d3ff768 378 Gene3D G3DSA:3.20.20.140 55 341 1.1E-142 T 13-10-2018 VEA_003787 c8eb7e922f004ee80e58f9e72a8515b0 92 Pfam PF01386 Ribosomal L25p family 4 89 8.2E-22 T 13-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 VEA_003787 c8eb7e922f004ee80e58f9e72a8515b0 92 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 1 92 26.42 T 13-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 VEA_003787 c8eb7e922f004ee80e58f9e72a8515b0 92 SUPERFAMILY SSF50715 1 92 5.41E-28 T 13-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VEA_003787 c8eb7e922f004ee80e58f9e72a8515b0 92 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 1 92 4.0E-38 T 13-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 VEA_003787 c8eb7e922f004ee80e58f9e72a8515b0 92 Gene3D G3DSA:2.40.240.10 1 92 1.2E-33 T 13-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VEA_004369 3a01c3c4169ab9fc857afc61c8e0e765 388 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 62 67 - T 13-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 VEA_004369 3a01c3c4169ab9fc857afc61c8e0e765 388 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 264 275 - T 13-10-2018 IPR033116 Serine proteases, trypsin family, serine active site VEA_004369 3a01c3c4169ab9fc857afc61c8e0e765 388 SUPERFAMILY SSF50494 43 319 9.82E-40 T 13-10-2018 IPR009003 Peptidase S1, PA clan VEA_004369 3a01c3c4169ab9fc857afc61c8e0e765 388 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 52 67 2.8E-15 T 13-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VEA_004369 3a01c3c4169ab9fc857afc61c8e0e765 388 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 136 150 2.8E-15 T 13-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VEA_004369 3a01c3c4169ab9fc857afc61c8e0e765 388 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 263 275 2.8E-15 T 13-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VEA_004369 3a01c3c4169ab9fc857afc61c8e0e765 388 Gene3D G3DSA:2.40.10.10 162 318 3.8E-24 T 13-10-2018 VEA_004369 3a01c3c4169ab9fc857afc61c8e0e765 388 Gene3D G3DSA:2.40.10.10 37 161 4.3E-17 T 13-10-2018 VEA_004369 3a01c3c4169ab9fc857afc61c8e0e765 388 Pfam PF00089 Trypsin 48 315 6.7E-28 T 13-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VEA_004369 3a01c3c4169ab9fc857afc61c8e0e765 388 SMART SM00020 25 315 2.0E-21 T 13-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VEA_004369 3a01c3c4169ab9fc857afc61c8e0e765 388 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 366 386 0.0032 T 13-10-2018 IPR020008 GlyGly-CTERM domain VEA_001018 fc269c10d48e4878648629d3d2043b95 235 Gene3D G3DSA:3.40.605.10 9 214 3.8E-10 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VEA_001018 fc269c10d48e4878648629d3d2043b95 235 SUPERFAMILY SSF53720 9 180 1.44E-12 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VEA_001280 87f5534005df150b0c55637afc345293 282 SUPERFAMILY SSF50182 96 169 5.23E-10 T 13-10-2018 IPR010920 LSM domain superfamily VEA_001280 87f5534005df150b0c55637afc345293 282 Pfam PF00924 Mechanosensitive ion channel 58 184 8.0E-16 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VEA_002337 b37cc703a182a884ef584cd0575b904e 466 Gene3D G3DSA:1.10.860.10 12 176 4.5E-53 T 13-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal VEA_002337 b37cc703a182a884ef584cd0575b904e 466 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 20 457 6.5E-175 T 13-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 VEA_002337 b37cc703a182a884ef584cd0575b904e 466 Pfam PF03796 DnaB-like helicase C terminal domain 199 455 5.2E-113 T 13-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 VEA_002337 b37cc703a182a884ef584cd0575b904e 466 SUPERFAMILY SSF52540 197 449 1.15E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002337 b37cc703a182a884ef584cd0575b904e 466 Pfam PF00772 DnaB-like helicase N terminal domain 20 121 3.7E-35 T 13-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 VEA_002337 b37cc703a182a884ef584cd0575b904e 466 SUPERFAMILY SSF48024 18 129 3.14E-37 T 13-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 VEA_002337 b37cc703a182a884ef584cd0575b904e 466 Gene3D G3DSA:3.40.50.300 177 456 5.7E-106 T 13-10-2018 VEA_004197 ac32cbbda58f1a07120523aba4f22137 157 Pfam PF04073 Aminoacyl-tRNA editing domain 32 145 8.6E-26 T 13-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VEA_004197 ac32cbbda58f1a07120523aba4f22137 157 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 7.3E-59 T 13-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC VEA_004197 ac32cbbda58f1a07120523aba4f22137 157 SUPERFAMILY SSF55826 2 156 6.02E-44 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VEA_004197 ac32cbbda58f1a07120523aba4f22137 157 Gene3D G3DSA:3.90.960.10 1 157 1.2E-57 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VEA_004197 ac32cbbda58f1a07120523aba4f22137 157 PIRSF PIRSF006181 1 157 3.6E-53 T 13-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC VEA_002089 3f61e822798988bac0502472699520fb 223 Pfam PF01810 LysE type translocator 16 211 9.2E-36 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEA_002089 3f61e822798988bac0502472699520fb 223 PIRSF PIRSF006324 1 214 2.7E-48 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEA_004128 8f61020b244952a2765d070f2bf34055 509 Gene3D G3DSA:3.30.1360.60 420 500 5.2E-25 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VEA_004128 8f61020b244952a2765d070f2bf34055 509 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 1 495 9.7E-201 T 13-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 VEA_004128 8f61020b244952a2765d070f2bf34055 509 Pfam PF00367 phosphotransferase system, EIIB 426 459 2.8E-13 T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VEA_004128 8f61020b244952a2765d070f2bf34055 509 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 397 484 3.5E-24 T 13-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VEA_004128 8f61020b244952a2765d070f2bf34055 509 SUPERFAMILY SSF55604 424 496 2.62E-20 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VEA_004128 8f61020b244952a2765d070f2bf34055 509 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 437 454 - T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VEA_004128 8f61020b244952a2765d070f2bf34055 509 Pfam PF02378 Phosphotransferase system, EIIC 1 339 4.3E-66 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VEA_001890 51fc4283cacff63b2068e66ea87ca25f 405 Gene3D G3DSA:1.20.81.30 55 172 5.2E-38 T 13-10-2018 VEA_001890 51fc4283cacff63b2068e66ea87ca25f 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 368 382 8.1E-37 T 13-10-2018 IPR003004 GspF/PilC family VEA_001890 51fc4283cacff63b2068e66ea87ca25f 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 165 193 8.1E-37 T 13-10-2018 IPR003004 GspF/PilC family VEA_001890 51fc4283cacff63b2068e66ea87ca25f 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 384 403 8.1E-37 T 13-10-2018 IPR003004 GspF/PilC family VEA_001890 51fc4283cacff63b2068e66ea87ca25f 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 66 78 8.1E-37 T 13-10-2018 IPR003004 GspF/PilC family VEA_001890 51fc4283cacff63b2068e66ea87ca25f 405 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 165 193 - T 13-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 VEA_001890 51fc4283cacff63b2068e66ea87ca25f 405 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 402 4.0E-155 T 13-10-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 VEA_001890 51fc4283cacff63b2068e66ea87ca25f 405 Pfam PF00482 Type II secretion system (T2SS), protein F 71 193 2.7E-35 T 13-10-2018 IPR018076 Type II secretion system F domain VEA_001890 51fc4283cacff63b2068e66ea87ca25f 405 Pfam PF00482 Type II secretion system (T2SS), protein F 273 395 9.8E-25 T 13-10-2018 IPR018076 Type II secretion system F domain VEA_001890 51fc4283cacff63b2068e66ea87ca25f 405 Gene3D G3DSA:1.20.81.30 257 368 1.4E-25 T 13-10-2018 VEA_000703 a7908c44bf78ff988311cf527db098dd 157 Gene3D G3DSA:3.30.1060.10 1 156 2.5E-41 T 13-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VEA_000703 a7908c44bf78ff988311cf527db098dd 157 SUPERFAMILY SSF55068 1 148 2.22E-49 T 13-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VEA_000703 a7908c44bf78ff988311cf527db098dd 157 Pfam PF01625 Peptide methionine sulfoxide reductase 3 146 2.6E-43 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VEA_000703 a7908c44bf78ff988311cf527db098dd 157 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 1 151 26.816 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VEA_003349 44653ca258030fe32bd83ff9d63b0a1d 141 Pfam PF05932 Tir chaperone protein (CesT) family 2 116 2.7E-9 T 13-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 VEA_003349 44653ca258030fe32bd83ff9d63b0a1d 141 Gene3D G3DSA:3.30.1460.10 1 124 1.1E-12 T 13-10-2018 VEA_003349 44653ca258030fe32bd83ff9d63b0a1d 141 SUPERFAMILY SSF69635 2 124 1.46E-9 T 13-10-2018 VEA_001773 c0ed6a4e484b9285ed2504334a5b1ed0 426 SMART SM00984 319 419 2.2E-34 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VEA_001773 c0ed6a4e484b9285ed2504334a5b1ed0 426 SUPERFAMILY SSF52413 302 419 1.18E-29 T 13-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 VEA_001773 c0ed6a4e484b9285ed2504334a5b1ed0 426 PIRSF PIRSF000124 8 424 2.2E-48 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 VEA_001773 c0ed6a4e484b9285ed2504334a5b1ed0 426 SUPERFAMILY SSF48179 203 293 6.63E-25 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VEA_001773 c0ed6a4e484b9285ed2504334a5b1ed0 426 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 9 413 5.7E-120 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 VEA_001773 c0ed6a4e484b9285ed2504334a5b1ed0 426 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 319 419 1.1E-22 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VEA_001773 c0ed6a4e484b9285ed2504334a5b1ed0 426 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 292 1.5E-23 T 13-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VEA_001773 c0ed6a4e484b9285ed2504334a5b1ed0 426 Gene3D G3DSA:3.40.50.720 2 200 1.3E-56 T 13-10-2018 VEA_001773 c0ed6a4e484b9285ed2504334a5b1ed0 426 PIRSF PIRSF500136 1 426 3.8E-151 T 13-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 VEA_001773 c0ed6a4e484b9285ed2504334a5b1ed0 426 Gene3D G3DSA:3.40.50.720 202 425 1.3E-55 T 13-10-2018 VEA_001773 c0ed6a4e484b9285ed2504334a5b1ed0 426 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 9 182 1.7E-31 T 13-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VEA_001773 c0ed6a4e484b9285ed2504334a5b1ed0 426 SUPERFAMILY SSF51735 9 193 2.39E-43 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_003856 c303e1a584cc373ba7945159644ad321 205 Gene3D G3DSA:1.10.3890.10 1 205 1.9E-77 T 13-10-2018 IPR035932 HflD-like superfamily VEA_003856 c303e1a584cc373ba7945159644ad321 205 Pfam PF04356 Protein of unknown function (DUF489) 7 195 8.3E-77 T 13-10-2018 IPR007451 High frequency lysogenization protein HflD VEA_003856 c303e1a584cc373ba7945159644ad321 205 SUPERFAMILY SSF101322 2 204 6.67E-80 T 13-10-2018 IPR035932 HflD-like superfamily VEA_003856 c303e1a584cc373ba7945159644ad321 205 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 203 35.937 T 13-10-2018 IPR007451 High frequency lysogenization protein HflD VEA_003856 c303e1a584cc373ba7945159644ad321 205 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 194 1.0E-103 T 13-10-2018 VEA_004414 fa445cb2fd7b3393c35c0a8130b74e32 242 SMART SM00850 145 239 8.1E-24 T 13-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 VEA_004414 fa445cb2fd7b3393c35c0a8130b74e32 242 SUPERFAMILY SSF52172 1 123 2.56E-28 T 13-10-2018 IPR011006 CheY-like superfamily VEA_004414 fa445cb2fd7b3393c35c0a8130b74e32 242 Pfam PF00072 Response regulator receiver domain 5 112 2.9E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_004414 fa445cb2fd7b3393c35c0a8130b74e32 242 Gene3D G3DSA:2.40.50.1020 161 241 3.1E-9 T 13-10-2018 VEA_004414 fa445cb2fd7b3393c35c0a8130b74e32 242 SMART SM00448 2 112 1.8E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_004414 fa445cb2fd7b3393c35c0a8130b74e32 242 Gene3D G3DSA:3.40.50.2300 1 129 6.5E-29 T 13-10-2018 VEA_004414 fa445cb2fd7b3393c35c0a8130b74e32 242 Pfam PF04397 LytTr DNA-binding domain 146 238 1.8E-21 T 13-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 VEA_001649 68bed31b690445cdaa6cecb7f560c264 574 Gene3D G3DSA:3.40.50.970 1 182 1.0E-73 T 13-10-2018 VEA_001649 68bed31b690445cdaa6cecb7f560c264 574 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 433 452 - T 13-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 VEA_001649 68bed31b690445cdaa6cecb7f560c264 574 SUPERFAMILY SSF52467 191 364 2.31E-63 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VEA_001649 68bed31b690445cdaa6cecb7f560c264 574 SUPERFAMILY SSF52518 373 567 9.13E-68 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VEA_001649 68bed31b690445cdaa6cecb7f560c264 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 331 1.4E-46 T 13-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 VEA_001649 68bed31b690445cdaa6cecb7f560c264 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 396 545 2.4E-50 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VEA_001649 68bed31b690445cdaa6cecb7f560c264 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 5 569 3.2E-272 T 13-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 VEA_001649 68bed31b690445cdaa6cecb7f560c264 574 Gene3D G3DSA:3.40.50.1220 192 362 1.8E-59 T 13-10-2018 VEA_001649 68bed31b690445cdaa6cecb7f560c264 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 173 9.9E-60 T 13-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VEA_001649 68bed31b690445cdaa6cecb7f560c264 574 Gene3D G3DSA:3.40.50.970 366 574 3.3E-65 T 13-10-2018 VEA_001649 68bed31b690445cdaa6cecb7f560c264 574 SUPERFAMILY SSF52518 2 181 4.12E-65 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VEA_002141 375c91d2c596b346dce1d25cc27a387f 285 Pfam PF04545 Sigma-70, region 4 229 279 7.7E-16 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 VEA_002141 375c91d2c596b346dce1d25cc27a387f 285 SUPERFAMILY SSF88659 198 281 1.68E-18 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VEA_002141 375c91d2c596b346dce1d25cc27a387f 285 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEA_002141 375c91d2c596b346dce1d25cc27a387f 285 PRINTS PR00046 Major sigma-70 factor signature 267 278 1.1E-18 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEA_002141 375c91d2c596b346dce1d25cc27a387f 285 PRINTS PR00046 Major sigma-70 factor signature 77 90 1.1E-18 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEA_002141 375c91d2c596b346dce1d25cc27a387f 285 PRINTS PR00046 Major sigma-70 factor signature 233 245 1.1E-18 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEA_002141 375c91d2c596b346dce1d25cc27a387f 285 PRINTS PR00046 Major sigma-70 factor signature 252 267 1.1E-18 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEA_002141 375c91d2c596b346dce1d25cc27a387f 285 Gene3D G3DSA:1.20.120.1810 11 122 6.7E-27 T 13-10-2018 VEA_002141 375c91d2c596b346dce1d25cc27a387f 285 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEA_002141 375c91d2c596b346dce1d25cc27a387f 285 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 284 53.146 T 13-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 VEA_002141 375c91d2c596b346dce1d25cc27a387f 285 Pfam PF00140 Sigma-70 factor, region 1.2 14 40 8.0E-9 T 13-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VEA_002141 375c91d2c596b346dce1d25cc27a387f 285 Gene3D G3DSA:1.20.140.160 131 283 1.3E-14 T 13-10-2018 VEA_002141 375c91d2c596b346dce1d25cc27a387f 285 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 15 282 4.0E-126 T 13-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 VEA_002141 375c91d2c596b346dce1d25cc27a387f 285 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 280 3.1E-33 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VEA_002141 375c91d2c596b346dce1d25cc27a387f 285 Pfam PF04542 Sigma-70 region 2 53 122 6.4E-17 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VEA_002141 375c91d2c596b346dce1d25cc27a387f 285 SUPERFAMILY SSF88946 11 122 5.97E-40 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VEA_000834 c4440a4f4b41e3666f883ef96d865043 291 Gene3D G3DSA:1.10.3470.10 76 287 6.3E-8 T 13-10-2018 IPR037294 ABC transporter, BtuC-like VEA_000834 c4440a4f4b41e3666f883ef96d865043 291 SUPERFAMILY SSF81345 15 281 3.53E-33 T 13-10-2018 IPR037294 ABC transporter, BtuC-like VEA_000834 c4440a4f4b41e3666f883ef96d865043 291 Pfam PF00950 ABC 3 transport family 22 285 2.9E-55 T 13-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 VEA_002693 2ca82d0eb3488f52dd7780034f659a41 306 Gene3D G3DSA:3.30.70.270 141 306 1.2E-49 T 13-10-2018 VEA_002693 2ca82d0eb3488f52dd7780034f659a41 306 Pfam PF00990 Diguanylate cyclase, GGDEF domain 142 296 3.5E-43 T 13-10-2018 IPR000160 GGDEF domain VEA_002693 2ca82d0eb3488f52dd7780034f659a41 306 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 137 299 1.5E-45 T 13-10-2018 IPR000160 GGDEF domain VEA_002693 2ca82d0eb3488f52dd7780034f659a41 306 Gene3D G3DSA:3.30.450.20 4 140 5.1E-5 T 13-10-2018 VEA_002693 2ca82d0eb3488f52dd7780034f659a41 306 SUPERFAMILY SSF55073 146 302 4.55E-43 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_002693 2ca82d0eb3488f52dd7780034f659a41 306 SUPERFAMILY SSF55785 5 84 9.0E-5 T 13-10-2018 IPR035965 PAS domain superfamily VEA_002693 2ca82d0eb3488f52dd7780034f659a41 306 SMART SM00267 130 301 3.5E-50 T 13-10-2018 IPR000160 GGDEF domain VEA_004117 ad87331cda65c9cca36fc761c152af17 429 Gene3D G3DSA:1.10.230.10 268 376 1.7E-150 T 13-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain VEA_004117 ad87331cda65c9cca36fc761c152af17 429 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 13-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 VEA_004117 ad87331cda65c9cca36fc761c152af17 429 PIRSF PIRSF001369 38 429 1.4E-174 T 13-10-2018 IPR024176 Citrate synthase, bacterial-type VEA_004117 ad87331cda65c9cca36fc761c152af17 429 SUPERFAMILY SSF48256 4 428 1.03E-170 T 13-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 VEA_004117 ad87331cda65c9cca36fc761c152af17 429 Pfam PF00285 Citrate synthase, C-terminal domain 49 411 5.5E-135 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 VEA_004117 ad87331cda65c9cca36fc761c152af17 429 PRINTS PR00143 Citrate synthase signature 241 269 2.7E-55 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 VEA_004117 ad87331cda65c9cca36fc761c152af17 429 PRINTS PR00143 Citrate synthase signature 296 316 2.7E-55 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 VEA_004117 ad87331cda65c9cca36fc761c152af17 429 PRINTS PR00143 Citrate synthase signature 379 393 2.7E-55 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 VEA_004117 ad87331cda65c9cca36fc761c152af17 429 PRINTS PR00143 Citrate synthase signature 219 234 2.7E-55 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 VEA_004117 ad87331cda65c9cca36fc761c152af17 429 PRINTS PR00143 Citrate synthase signature 359 375 2.7E-55 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 VEA_004117 ad87331cda65c9cca36fc761c152af17 429 PRINTS PR00143 Citrate synthase signature 165 178 2.7E-55 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 VEA_004117 ad87331cda65c9cca36fc761c152af17 429 Gene3D G3DSA:1.10.580.10 57 411 1.7E-150 T 13-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 VEA_004117 ad87331cda65c9cca36fc761c152af17 429 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 422 1.1E-238 T 13-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 VEA_004117 ad87331cda65c9cca36fc761c152af17 429 Gene3D G3DSA:2.20.28.60 1 50 1.6E-26 T 13-10-2018 VEA_004379 61ea58968cfbcc4bc81f374e115df994 557 SUPERFAMILY SSF161098 283 538 1.44E-35 T 13-10-2018 IPR035906 MetI-like superfamily VEA_004379 61ea58968cfbcc4bc81f374e115df994 557 Gene3D G3DSA:1.10.3720.10 286 550 8.3E-30 T 13-10-2018 IPR035906 MetI-like superfamily VEA_004379 61ea58968cfbcc4bc81f374e115df994 557 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 288 548 3.5E-76 T 13-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 VEA_004379 61ea58968cfbcc4bc81f374e115df994 557 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 324 476 5.3E-18 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_004147 d86f3de06c4275bac9d217a5dd9f4763 304 Pfam PF08338 Domain of unknown function (DUF1731) 253 299 8.0E-16 T 13-10-2018 IPR013549 Domain of unknown function DUF1731 VEA_004147 d86f3de06c4275bac9d217a5dd9f4763 304 SUPERFAMILY SSF51735 1 299 6.67E-45 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_004147 d86f3de06c4275bac9d217a5dd9f4763 304 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 225 9.8E-24 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VEA_004147 d86f3de06c4275bac9d217a5dd9f4763 304 Gene3D G3DSA:3.40.50.720 2 303 7.5E-76 T 13-10-2018 VEA_004147 d86f3de06c4275bac9d217a5dd9f4763 304 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 296 4.5E-103 T 13-10-2018 IPR010099 Epimerase family protein SDR39U1 VEA_003118 b6ed8402901dc0668c91b53d907c403a 634 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 315 621 2.8E-59 T 13-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal VEA_003118 b6ed8402901dc0668c91b53d907c403a 634 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 273 293 3.0E-67 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEA_003118 b6ed8402901dc0668c91b53d907c403a 634 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 158 180 3.0E-67 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEA_003118 b6ed8402901dc0668c91b53d907c403a 634 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 293 309 3.0E-67 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEA_003118 b6ed8402901dc0668c91b53d907c403a 634 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 309 328 3.0E-67 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEA_003118 b6ed8402901dc0668c91b53d907c403a 634 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 3.0E-67 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEA_003118 b6ed8402901dc0668c91b53d907c403a 634 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 209 235 3.0E-67 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEA_003118 b6ed8402901dc0668c91b53d907c403a 634 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 243 263 3.0E-67 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEA_003118 b6ed8402901dc0668c91b53d907c403a 634 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 131 148 3.0E-67 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEA_003118 b6ed8402901dc0668c91b53d907c403a 634 Pfam PF01578 Cytochrome C assembly protein 89 294 3.4E-40 T 13-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VEA_002147 29de88b444af3c6ad4746fd188a13fd5 758 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 2 749 0.0 T 13-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 VEA_002147 29de88b444af3c6ad4746fd188a13fd5 758 SUPERFAMILY SSF69593 189 439 1.96E-25 T 13-10-2018 VEA_002147 29de88b444af3c6ad4746fd188a13fd5 758 PIRSF PIRSF000437 1 758 0.0 T 13-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 VEA_002147 29de88b444af3c6ad4746fd188a13fd5 758 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 1 757 29.464 T 13-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 VEA_002147 29de88b444af3c6ad4746fd188a13fd5 758 PIRSF PIRSF500064 1 758 0.0 T 13-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 VEA_002147 29de88b444af3c6ad4746fd188a13fd5 758 Pfam PF01553 Acyltransferase 239 374 1.5E-23 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VEA_002147 29de88b444af3c6ad4746fd188a13fd5 758 SMART SM00563 250 377 7.8E-27 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VEA_001119 466751fefaab3f82c930d0852dd59fe6 317 Gene3D G3DSA:3.30.1950.10 29 110 1.0E-117 T 13-10-2018 VEA_001119 466751fefaab3f82c930d0852dd59fe6 317 Pfam PF02563 Polysaccharide biosynthesis/export protein 23 106 1.1E-26 T 13-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 VEA_001119 466751fefaab3f82c930d0852dd59fe6 317 Gene3D G3DSA:1.20.5.70 284 317 3.7E-19 T 13-10-2018 VEA_001119 466751fefaab3f82c930d0852dd59fe6 317 Gene3D G3DSA:3.10.560.10 196 281 1.0E-117 T 13-10-2018 VEA_001119 466751fefaab3f82c930d0852dd59fe6 317 Gene3D G3DSA:3.10.560.10 7 195 1.0E-117 T 13-10-2018 VEA_001119 466751fefaab3f82c930d0852dd59fe6 317 Pfam PF10531 SLBB domain 114 160 4.1E-9 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEA_001119 466751fefaab3f82c930d0852dd59fe6 317 Pfam PF10531 SLBB domain 197 250 1.4E-6 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEA_000450 6e93492d4b1f6f02466aef961ec92bdd 687 SUPERFAMILY SSF52540 370 672 8.89E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000450 6e93492d4b1f6f02466aef961ec92bdd 687 Gene3D G3DSA:3.40.50.300 1 157 1.5E-51 T 13-10-2018 VEA_000450 6e93492d4b1f6f02466aef961ec92bdd 687 Gene3D G3DSA:3.40.50.300 158 368 2.9E-49 T 13-10-2018 VEA_000450 6e93492d4b1f6f02466aef961ec92bdd 687 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 455 473 - T 13-10-2018 IPR028299 ClpA/B, conserved site 2 VEA_000450 6e93492d4b1f6f02466aef961ec92bdd 687 Pfam PF07724 AAA domain (Cdc48 subfamily) 421 585 1.4E-43 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VEA_000450 6e93492d4b1f6f02466aef961ec92bdd 687 Gene3D G3DSA:3.40.50.300 374 589 2.0E-69 T 13-10-2018 VEA_000450 6e93492d4b1f6f02466aef961ec92bdd 687 SMART SM01086 592 682 6.3E-11 T 13-10-2018 IPR019489 Clp ATPase, C-terminal VEA_000450 6e93492d4b1f6f02466aef961ec92bdd 687 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 15 143 4.3E-10 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VEA_000450 6e93492d4b1f6f02466aef961ec92bdd 687 SUPERFAMILY SSF52540 2 305 7.71E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000450 6e93492d4b1f6f02466aef961ec92bdd 687 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 470 488 2.1E-33 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 VEA_000450 6e93492d4b1f6f02466aef961ec92bdd 687 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 532 546 2.1E-33 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 VEA_000450 6e93492d4b1f6f02466aef961ec92bdd 687 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 499 517 2.1E-33 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 VEA_000450 6e93492d4b1f6f02466aef961ec92bdd 687 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 425 443 2.1E-33 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 VEA_000450 6e93492d4b1f6f02466aef961ec92bdd 687 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 104 116 - T 13-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 VEA_000450 6e93492d4b1f6f02466aef961ec92bdd 687 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 592 667 2.6E-13 T 13-10-2018 IPR019489 Clp ATPase, C-terminal VEA_000450 6e93492d4b1f6f02466aef961ec92bdd 687 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 1 674 2.6E-303 T 13-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 VEA_000450 6e93492d4b1f6f02466aef961ec92bdd 687 SMART SM00382 8 153 3.8E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_000450 6e93492d4b1f6f02466aef961ec92bdd 687 SMART SM00382 421 580 3.4E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_000450 6e93492d4b1f6f02466aef961ec92bdd 687 Gene3D G3DSA:1.10.8.60 592 685 5.1E-14 T 13-10-2018 VEA_003364 f549fddc4b2b1a004bc019becaba4582 382 TIGRFAM TIGR02514 type_III_yscP: type III secretion system needle length determinant 243 379 4.0E-45 T 13-10-2018 IPR013354 Type III secretion system needle length determinant, C-terminal domain GO:0009405 VEA_002934 5e080358437d671c9cfa30ee419eac1e 194 Gene3D G3DSA:2.40.500.20 83 194 3.5E-42 T 13-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VEA_002934 5e080358437d671c9cfa30ee419eac1e 194 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 4.7E-34 T 13-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VEA_002934 5e080358437d671c9cfa30ee419eac1e 194 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 2.0E-38 T 13-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VEA_002934 5e080358437d671c9cfa30ee419eac1e 194 PIRSF PIRSF000349 1 194 4.5E-84 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VEA_002934 5e080358437d671c9cfa30ee419eac1e 194 SUPERFAMILY SSF54719 84 193 2.75E-43 T 13-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VEA_002934 5e080358437d671c9cfa30ee419eac1e 194 Gene3D G3DSA:1.10.287.990 20 82 8.8E-25 T 13-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VEA_002934 5e080358437d671c9cfa30ee419eac1e 194 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.5E-21 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VEA_002934 5e080358437d671c9cfa30ee419eac1e 194 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 1.5E-21 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VEA_002934 5e080358437d671c9cfa30ee419eac1e 194 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.5E-21 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VEA_002934 5e080358437d671c9cfa30ee419eac1e 194 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 1.5E-21 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VEA_002934 5e080358437d671c9cfa30ee419eac1e 194 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 1.5E-21 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VEA_002934 5e080358437d671c9cfa30ee419eac1e 194 SUPERFAMILY SSF46609 1 84 5.24E-35 T 13-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VEA_002934 5e080358437d671c9cfa30ee419eac1e 194 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 13-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VEA_000863 e905a1ce758fa88ada8d20fee652ab4d 286 SUPERFAMILY SSF53613 17 279 1.4E-82 T 13-10-2018 IPR029056 Ribokinase-like VEA_000863 e905a1ce758fa88ada8d20fee652ab4d 286 Pfam PF08543 Phosphomethylpyrimidine kinase 28 276 3.6E-95 T 13-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 VEA_000863 e905a1ce758fa88ada8d20fee652ab4d 286 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 21 278 3.5E-102 T 13-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VEA_000863 e905a1ce758fa88ada8d20fee652ab4d 286 Gene3D G3DSA:3.40.1190.20 2 285 4.1E-103 T 13-10-2018 IPR029056 Ribokinase-like VEA_001298 acba77e8728a02511b1039e2ee4f3aa5 150 ProSitePatterns PS00196 Type-1 copper (blue) proteins signature. 127 144 - T 13-10-2018 IPR028871 Blue (type 1) copper protein, binding site VEA_001298 acba77e8728a02511b1039e2ee4f3aa5 150 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 27 149 4.0E-65 T 13-10-2018 VEA_001298 acba77e8728a02511b1039e2ee4f3aa5 150 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 23 147 6.8E-25 T 13-10-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 VEA_001298 acba77e8728a02511b1039e2ee4f3aa5 150 SUPERFAMILY SSF49503 23 147 4.57E-46 T 13-10-2018 IPR008972 Cupredoxin VEA_001298 acba77e8728a02511b1039e2ee4f3aa5 150 Gene3D G3DSA:2.60.40.420 23 149 1.2E-45 T 13-10-2018 IPR008972 Cupredoxin VEA_001298 acba77e8728a02511b1039e2ee4f3aa5 150 TIGRFAM TIGR02695 azurin: azurin 25 149 1.8E-61 T 13-10-2018 IPR014068 Azurin VEA_002170 8c1ba8b3c18658d94a334f71b82c4fab 233 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 13-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_002170 8c1ba8b3c18658d94a334f71b82c4fab 233 Gene3D G3DSA:3.40.50.790 68 159 1.6E-80 T 13-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich VEA_002170 8c1ba8b3c18658d94a334f71b82c4fab 233 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 2.5E-106 T 13-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 VEA_002170 8c1ba8b3c18658d94a334f71b82c4fab 233 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.048 T 13-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 VEA_002170 8c1ba8b3c18658d94a334f71b82c4fab 233 SUPERFAMILY SSF56808 6 225 2.49E-82 T 13-10-2018 IPR023674 Ribosomal protein L1-like VEA_002170 8c1ba8b3c18658d94a334f71b82c4fab 233 PIRSF PIRSF002155 1 227 3.8E-79 T 13-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_002170 8c1ba8b3c18658d94a334f71b82c4fab 233 Gene3D G3DSA:3.30.190.20 21 225 1.6E-80 T 13-10-2018 VEA_002170 8c1ba8b3c18658d94a334f71b82c4fab 233 Pfam PF00687 Ribosomal protein L1p/L10e family 31 219 1.7E-52 T 13-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein VEA_001682 f7a14f7c0673af373049c2783d02578a 358 SUPERFAMILY SSF51395 6 357 7.94E-116 T 13-10-2018 VEA_001682 f7a14f7c0673af373049c2783d02578a 358 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 336 2.1E-89 T 13-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 VEA_001682 f7a14f7c0673af373049c2783d02578a 358 Gene3D G3DSA:3.20.20.70 1 358 1.9E-137 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_002811 be0ec053e5b132e27eae8af16061e7cf 488 SUPERFAMILY SSF46689 349 486 7.62E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_002811 be0ec053e5b132e27eae8af16061e7cf 488 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VEA_002811 be0ec053e5b132e27eae8af16061e7cf 488 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VEA_002811 be0ec053e5b132e27eae8af16061e7cf 488 SMART SM00382 157 301 4.8E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_002811 be0ec053e5b132e27eae8af16061e7cf 488 Gene3D G3DSA:3.40.50.2300 1 117 4.1E-11 T 13-10-2018 VEA_002811 be0ec053e5b132e27eae8af16061e7cf 488 SUPERFAMILY SSF52540 137 378 8.52E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002811 be0ec053e5b132e27eae8af16061e7cf 488 Pfam PF02954 Bacterial regulatory protein, Fis family 444 484 1.0E-14 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEA_002811 be0ec053e5b132e27eae8af16061e7cf 488 Gene3D G3DSA:1.10.8.60 309 385 9.2E-25 T 13-10-2018 VEA_002811 be0ec053e5b132e27eae8af16061e7cf 488 Pfam PF06490 Flagellar regulatory protein FleQ 6 114 1.1E-30 T 13-10-2018 IPR010518 Flagellar regulatory FleQ VEA_002811 be0ec053e5b132e27eae8af16061e7cf 488 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 450 467 1.3E-10 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEA_002811 be0ec053e5b132e27eae8af16061e7cf 488 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 467 487 1.3E-10 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEA_002811 be0ec053e5b132e27eae8af16061e7cf 488 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 349 358 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VEA_002811 be0ec053e5b132e27eae8af16061e7cf 488 Pfam PF00158 Sigma-54 interaction domain 137 304 7.9E-73 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VEA_002811 be0ec053e5b132e27eae8af16061e7cf 488 Gene3D G3DSA:3.40.50.300 125 308 3.3E-66 T 13-10-2018 VEA_002811 be0ec053e5b132e27eae8af16061e7cf 488 Gene3D G3DSA:1.10.10.60 422 488 2.8E-13 T 13-10-2018 VEA_003342 b22178afa92724689441deeec9eeeebe 211 TIGRFAM TIGR02509 type_III_yopR: type III secretion effector, YopR family 85 210 3.4E-42 T 13-10-2018 IPR013349 Type III secretion system effector YopR GO:0009405|GO:0030254|GO:0030257 VEA_003342 b22178afa92724689441deeec9eeeebe 211 Pfam PF09025 YopR, type III needle-polymerisation regulator 72 211 4.6E-51 T 13-10-2018 IPR013349 Type III secretion system effector YopR GO:0009405|GO:0030254|GO:0030257 VEA_003342 b22178afa92724689441deeec9eeeebe 211 SUPERFAMILY SSF140591 91 191 4.05E-6 T 13-10-2018 VEA_003164 ab280ecb20e49b3c813818c51f7cba1a 346 Pfam PF05128 Domain of unknown function (DUF697) 181 338 3.3E-48 T 13-10-2018 IPR021147 Protein of unknown function DUF697 VEA_003164 ab280ecb20e49b3c813818c51f7cba1a 346 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 56 339 1.8E-73 T 13-10-2018 IPR006507 Uncharacterised protein family UPF0283 VEA_003646 154dc41bb41ed7ce5cb77a6e68b16170 498 Gene3D G3DSA:3.20.20.450 257 497 2.6E-65 T 13-10-2018 IPR035919 EAL domain superfamily VEA_003646 154dc41bb41ed7ce5cb77a6e68b16170 498 SMART SM00052 256 494 2.5E-68 T 13-10-2018 IPR001633 EAL domain VEA_003646 154dc41bb41ed7ce5cb77a6e68b16170 498 Pfam PF00563 EAL domain 264 489 1.1E-52 T 13-10-2018 IPR001633 EAL domain VEA_003646 154dc41bb41ed7ce5cb77a6e68b16170 498 SUPERFAMILY SSF141868 264 495 7.59E-65 T 13-10-2018 IPR035919 EAL domain superfamily VEA_000825 46be76cb00d624279d752a0fd5561170 301 Pfam PF08443 RimK-like ATP-grasp domain 98 286 8.7E-67 T 13-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 VEA_000825 46be76cb00d624279d752a0fd5561170 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 52.387 T 13-10-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK VEA_000825 46be76cb00d624279d752a0fd5561170 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 3 286 1.3E-84 T 13-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 VEA_000825 46be76cb00d624279d752a0fd5561170 301 Gene3D G3DSA:3.30.470.80 182 299 4.4E-42 T 13-10-2018 VEA_000825 46be76cb00d624279d752a0fd5561170 301 SUPERFAMILY SSF56059 98 288 3.89E-50 T 13-10-2018 VEA_000825 46be76cb00d624279d752a0fd5561170 301 Gene3D G3DSA:3.30.1490.20 115 181 1.9E-26 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VEA_000825 46be76cb00d624279d752a0fd5561170 301 Gene3D G3DSA:3.40.50.20 1 114 5.8E-41 T 13-10-2018 VEA_003906 d359489916f19a38d1bb3fea244cbca3 388 SUPERFAMILY SSF52440 174 280 1.15E-41 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VEA_003906 d359489916f19a38d1bb3fea244cbca3 388 SUPERFAMILY SSF56059 1 385 4.24E-84 T 13-10-2018 VEA_003906 d359489916f19a38d1bb3fea244cbca3 388 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 386 3.9E-156 T 13-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain VEA_003906 d359489916f19a38d1bb3fea244cbca3 388 Gene3D G3DSA:3.30.1490.330 264 345 1.2E-24 T 13-10-2018 VEA_001183 2499c958e8e827dc763c9ef490feec7b 339 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 257 274 4.4E-14 T 13-10-2018 VEA_001183 2499c958e8e827dc763c9ef490feec7b 339 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 295 315 4.4E-14 T 13-10-2018 VEA_001183 2499c958e8e827dc763c9ef490feec7b 339 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 172 191 4.4E-14 T 13-10-2018 VEA_001183 2499c958e8e827dc763c9ef490feec7b 339 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 275 294 4.4E-14 T 13-10-2018 VEA_001183 2499c958e8e827dc763c9ef490feec7b 339 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 228 254 4.4E-14 T 13-10-2018 VEA_001183 2499c958e8e827dc763c9ef490feec7b 339 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 72 90 4.4E-14 T 13-10-2018 VEA_001183 2499c958e8e827dc763c9ef490feec7b 339 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 110 128 4.4E-14 T 13-10-2018 VEA_001183 2499c958e8e827dc763c9ef490feec7b 339 Pfam PF00691 OmpA family 211 306 1.2E-18 T 13-10-2018 IPR006665 OmpA-like domain VEA_001183 2499c958e8e827dc763c9ef490feec7b 339 Gene3D G3DSA:2.60.40.2540 54 198 1.3E-15 T 13-10-2018 VEA_001183 2499c958e8e827dc763c9ef490feec7b 339 SUPERFAMILY SSF103088 184 311 7.72E-27 T 13-10-2018 IPR036737 OmpA-like domain superfamily VEA_001183 2499c958e8e827dc763c9ef490feec7b 339 PRINTS PR01021 OMPA domain signature 242 257 3.4E-9 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEA_001183 2499c958e8e827dc763c9ef490feec7b 339 PRINTS PR01021 OMPA domain signature 211 233 3.4E-9 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEA_001183 2499c958e8e827dc763c9ef490feec7b 339 PRINTS PR01021 OMPA domain signature 257 273 3.4E-9 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEA_001183 2499c958e8e827dc763c9ef490feec7b 339 Gene3D G3DSA:3.30.1330.60 200 324 6.4E-29 T 13-10-2018 IPR036737 OmpA-like domain superfamily VEA_001937 57d14653686ee89027404cd99f152f2d 552 Gene3D G3DSA:3.90.190.10 88 234 3.0E-26 T 13-10-2018 IPR029021 Protein-tyrosine phosphatase-like VEA_001937 57d14653686ee89027404cd99f152f2d 552 SUPERFAMILY SSF52799 84 227 2.86E-28 T 13-10-2018 IPR029021 Protein-tyrosine phosphatase-like VEA_001937 57d14653686ee89027404cd99f152f2d 552 Pfam PF00781 Diacylglycerol kinase catalytic domain 242 365 3.5E-27 T 13-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 VEA_001937 57d14653686ee89027404cd99f152f2d 552 SMART SM00046 240 363 2.1E-4 T 13-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 VEA_001937 57d14653686ee89027404cd99f152f2d 552 Gene3D G3DSA:3.40.50.10330 237 365 2.8E-28 T 13-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 VEA_001937 57d14653686ee89027404cd99f152f2d 552 Pfam PF00782 Dual specificity phosphatase, catalytic domain 99 229 2.5E-17 T 13-10-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 VEA_001937 57d14653686ee89027404cd99f152f2d 552 SMART SM00404 135 231 5.1E-4 T 13-10-2018 IPR003595 Protein-tyrosine phosphatase, catalytic VEA_001937 57d14653686ee89027404cd99f152f2d 552 Gene3D G3DSA:2.60.200.40 366 538 3.9E-26 T 13-10-2018 VEA_001937 57d14653686ee89027404cd99f152f2d 552 SUPERFAMILY SSF111331 242 547 2.35E-51 T 13-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily VEA_001937 57d14653686ee89027404cd99f152f2d 552 SMART SM00195 90 232 1.3E-13 T 13-10-2018 IPR020422 Dual specificity protein phosphatase domain GO:0006470|GO:0008138 VEA_000811 7ee9aa45268b6d95ad073226d861339d 707 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 123 615 5.4E-72 T 13-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VEA_000811 7ee9aa45268b6d95ad073226d861339d 707 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 24 695 5.1E-208 T 13-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ VEA_001990 d8d460fed830aaa8730c96f3a8c009e2 326 Gene3D G3DSA:3.40.50.720 126 294 4.6E-123 T 13-10-2018 VEA_001990 d8d460fed830aaa8730c96f3a8c009e2 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 87 3.1E-5 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VEA_001990 d8d460fed830aaa8730c96f3a8c009e2 326 SMART SM00829 13 324 6.9E-5 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VEA_001990 d8d460fed830aaa8730c96f3a8c009e2 326 Pfam PF00107 Zinc-binding dehydrogenase 159 272 2.7E-11 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VEA_001990 d8d460fed830aaa8730c96f3a8c009e2 326 SUPERFAMILY SSF51735 116 289 6.83E-34 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_001990 d8d460fed830aaa8730c96f3a8c009e2 326 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 3 326 5.2E-139 T 13-10-2018 IPR014188 Acrylyl-CoA reductase AcuI VEA_001990 d8d460fed830aaa8730c96f3a8c009e2 326 Gene3D G3DSA:3.90.180.10 17 325 4.6E-123 T 13-10-2018 VEA_001990 d8d460fed830aaa8730c96f3a8c009e2 326 SUPERFAMILY SSF50129 2 145 1.98E-44 T 13-10-2018 IPR011032 GroES-like superfamily VEA_000801 1f864962e13530eb62edd02b24e6dc27 202 SUPERFAMILY SSF51197 15 199 4.12E-67 T 13-10-2018 VEA_000801 1f864962e13530eb62edd02b24e6dc27 202 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 22 197 5.7E-33 T 13-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like VEA_000801 1f864962e13530eb62edd02b24e6dc27 202 Gene3D G3DSA:2.60.120.590 8 201 4.8E-68 T 13-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily VEA_002571 62fe617db77694678743594663c38750 122 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 120 7.0E-59 T 13-10-2018 IPR008249 Uncharacterised protein family UPF0231 VEA_002571 62fe617db77694678743594663c38750 122 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 122 30.039 T 13-10-2018 IPR008249 Uncharacterised protein family UPF0231 VEA_002571 62fe617db77694678743594663c38750 122 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 120 2.5E-41 T 13-10-2018 IPR008249 Uncharacterised protein family UPF0231 VEA_002571 62fe617db77694678743594663c38750 122 PIRSF PIRSF006287 1 122 1.4E-47 T 13-10-2018 IPR008249 Uncharacterised protein family UPF0231 VEA_002764 71db671e5f17b9a2059ea53494cc462a 436 Gene3D G3DSA:1.20.59.20 234 319 1.2E-26 T 13-10-2018 VEA_002764 71db671e5f17b9a2059ea53494cc462a 436 SUPERFAMILY SSF56037 322 435 5.49E-28 T 13-10-2018 VEA_002764 71db671e5f17b9a2059ea53494cc462a 436 SUPERFAMILY SSF52402 14 233 9.04E-60 T 13-10-2018 VEA_002764 71db671e5f17b9a2059ea53494cc462a 436 SUPERFAMILY SSF82829 235 318 1.31E-24 T 13-10-2018 VEA_002764 71db671e5f17b9a2059ea53494cc462a 436 Gene3D G3DSA:3.40.50.620 13 233 1.4E-67 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_002764 71db671e5f17b9a2059ea53494cc462a 436 Pfam PF09179 TilS substrate binding domain 248 315 3.2E-19 T 13-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VEA_002764 71db671e5f17b9a2059ea53494cc462a 436 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 8 309 22.233 T 13-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VEA_002764 71db671e5f17b9a2059ea53494cc462a 436 Pfam PF11734 TilS substrate C-terminal domain 365 435 2.0E-24 T 13-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VEA_002764 71db671e5f17b9a2059ea53494cc462a 436 SMART SM00977 365 434 1.7E-23 T 13-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VEA_002764 71db671e5f17b9a2059ea53494cc462a 436 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 21 203 3.1E-51 T 13-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VEA_002764 71db671e5f17b9a2059ea53494cc462a 436 Pfam PF01171 PP-loop family 21 199 2.2E-54 T 13-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 VEA_002764 71db671e5f17b9a2059ea53494cc462a 436 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 365 411 3.1E-16 T 13-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VEA_002143 f70464f3a46ac3d061001cd7c879f60b 280 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 87 2.2E-34 T 13-10-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 VEA_002143 f70464f3a46ac3d061001cd7c879f60b 280 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 3 271 1.4E-117 T 13-10-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 VEA_002143 f70464f3a46ac3d061001cd7c879f60b 280 Pfam PF01694 Rhomboid family 134 271 6.5E-31 T 13-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 VEA_002143 f70464f3a46ac3d061001cd7c879f60b 280 Gene3D G3DSA:3.30.70.2350 1 70 1.6E-25 T 13-10-2018 IPR038236 GlpG peptidase, N-terminal domain superfamily VEA_002143 f70464f3a46ac3d061001cd7c879f60b 280 Gene3D G3DSA:1.20.1540.10 90 279 9.5E-54 T 13-10-2018 IPR035952 Rhomboid-like superfamily VEA_002143 f70464f3a46ac3d061001cd7c879f60b 280 SUPERFAMILY SSF144091 96 271 2.88E-40 T 13-10-2018 VEA_002640 e7dc692296d2d0c664b1cd91fcc611c9 241 SUPERFAMILY SSF46689 191 240 2.82E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_002640 e7dc692296d2d0c664b1cd91fcc611c9 241 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 207 222 4.6E-7 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEA_002640 e7dc692296d2d0c664b1cd91fcc611c9 241 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 222 238 4.6E-7 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEA_002640 e7dc692296d2d0c664b1cd91fcc611c9 241 SUPERFAMILY SSF46689 142 187 1.48E-7 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_002640 e7dc692296d2d0c664b1cd91fcc611c9 241 Gene3D G3DSA:1.10.10.60 135 186 5.0E-12 T 13-10-2018 VEA_002640 e7dc692296d2d0c664b1cd91fcc611c9 241 Pfam PF12833 Helix-turn-helix domain 161 240 6.3E-21 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_002640 e7dc692296d2d0c664b1cd91fcc611c9 241 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 191 234 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VEA_002640 e7dc692296d2d0c664b1cd91fcc611c9 241 Gene3D G3DSA:1.10.10.60 187 241 2.1E-20 T 13-10-2018 VEA_002640 e7dc692296d2d0c664b1cd91fcc611c9 241 SMART SM00342 154 238 1.1E-25 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_002567 ca753fdbaff48e3d1c074b9c9f3b145e 822 Gene3D G3DSA:3.40.50.300 180 344 1.0E-51 T 13-10-2018 VEA_002567 ca753fdbaff48e3d1c074b9c9f3b145e 822 SMART SM00490 226 327 2.0E-18 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_002567 ca753fdbaff48e3d1c074b9c9f3b145e 822 Gene3D G3DSA:1.20.120.1080 371 465 5.2E-8 T 13-10-2018 VEA_002567 ca753fdbaff48e3d1c074b9c9f3b145e 822 SMART SM00487 2 184 1.0E-11 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEA_002567 ca753fdbaff48e3d1c074b9c9f3b145e 822 Pfam PF00271 Helicase conserved C-terminal domain 205 326 1.2E-14 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_002567 ca753fdbaff48e3d1c074b9c9f3b145e 822 Pfam PF04408 Helicase associated domain (HA2) 388 447 2.2E-9 T 13-10-2018 IPR007502 Helicase-associated domain GO:0004386 VEA_002567 ca753fdbaff48e3d1c074b9c9f3b145e 822 SMART SM00847 387 477 1.8E-7 T 13-10-2018 IPR007502 Helicase-associated domain GO:0004386 VEA_002567 ca753fdbaff48e3d1c074b9c9f3b145e 822 Pfam PF00270 DEAD/DEAH box helicase 12 163 9.1E-9 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VEA_002567 ca753fdbaff48e3d1c074b9c9f3b145e 822 SUPERFAMILY SSF52540 12 431 8.15E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002567 ca753fdbaff48e3d1c074b9c9f3b145e 822 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 818 0.0 T 13-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 VEA_002567 ca753fdbaff48e3d1c074b9c9f3b145e 822 PIRSF PIRSF005496 1 820 0.0 T 13-10-2018 VEA_002567 ca753fdbaff48e3d1c074b9c9f3b145e 822 Pfam PF08482 ATP-dependent helicase C-terminal 674 806 7.2E-52 T 13-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal VEA_002567 ca753fdbaff48e3d1c074b9c9f3b145e 822 Gene3D G3DSA:3.40.50.300 1 179 1.4E-50 T 13-10-2018 VEA_003338 f1a3fabc6df51d74a267541d28ab8130 433 SUPERFAMILY SSF49879 3 90 7.46E-5 T 13-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 VEA_003338 f1a3fabc6df51d74a267541d28ab8130 433 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 7 98 2.8E-18 T 13-10-2018 IPR032030 YscD, cytoplasmic domain VEA_003338 f1a3fabc6df51d74a267541d28ab8130 433 Gene3D G3DSA:2.60.200.20 1 119 4.1E-12 T 13-10-2018 VEA_003338 f1a3fabc6df51d74a267541d28ab8130 433 Pfam PF16693 Inner membrane component of T3SS, periplasmic domain 170 422 1.6E-123 T 13-10-2018 IPR032034 Yop protein translocation protein D, periplasmic domain VEA_003338 f1a3fabc6df51d74a267541d28ab8130 433 ProDom PD128471 PLASMID Y4YQ BLL1803 TRANSMEMBRANE MLR6347 MEMBRANE ID195 299 413 0.003 T 13-10-2018 VEA_003338 f1a3fabc6df51d74a267541d28ab8130 433 Gene3D G3DSA:3.30.70.1770 296 357 1.3E-8 T 13-10-2018 VEA_003338 f1a3fabc6df51d74a267541d28ab8130 433 TIGRFAM TIGR02500 type_III_yscD: type III secretion apparatus protein, YscD/HrpQ family 4 422 5.9E-120 T 13-10-2018 IPR012843 Type III secretion system YscD/HrpQ VEA_003003 3587cdadbdaf29d350573fbf892dec69 255 PIRSF PIRSF005902 1 255 1.3E-82 T 13-10-2018 IPR001130 TatD family GO:0016788 VEA_003003 3587cdadbdaf29d350573fbf892dec69 255 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 1.5E-94 T 13-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 VEA_003003 3587cdadbdaf29d350573fbf892dec69 255 SUPERFAMILY SSF51556 1 253 3.41E-88 T 13-10-2018 IPR032466 Metal-dependent hydrolase VEA_003003 3587cdadbdaf29d350573fbf892dec69 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VEA_003003 3587cdadbdaf29d350573fbf892dec69 255 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VEA_003003 3587cdadbdaf29d350573fbf892dec69 255 Pfam PF01026 TatD related DNase 3 253 6.9E-79 T 13-10-2018 IPR001130 TatD family GO:0016788 VEA_003003 3587cdadbdaf29d350573fbf892dec69 255 Gene3D G3DSA:3.20.20.140 1 255 6.9E-100 T 13-10-2018 VEA_001532 24452c4611629a589bf2bc61c328f6fc 293 Gene3D G3DSA:3.40.190.120 123 231 3.9E-94 T 13-10-2018 VEA_001532 24452c4611629a589bf2bc61c328f6fc 293 Gene3D G3DSA:3.40.190.10 26 289 3.9E-94 T 13-10-2018 VEA_001532 24452c4611629a589bf2bc61c328f6fc 293 SUPERFAMILY SSF53850 24 292 2.63E-64 T 13-10-2018 VEA_001532 24452c4611629a589bf2bc61c328f6fc 293 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 24 289 2.6E-65 T 13-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 VEA_000829 ba304ad4221c8933f56b81dc2fb6d994 306 PIRSF PIRSF036979 13 304 1.1E-97 T 13-10-2018 IPR006035 Ureohydrolase GO:0046872 VEA_000829 ba304ad4221c8933f56b81dc2fb6d994 306 ProSitePatterns PS01053 Arginase family signature. 229 250 - T 13-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 VEA_000829 ba304ad4221c8933f56b81dc2fb6d994 306 SUPERFAMILY SSF52768 12 303 1.13E-95 T 13-10-2018 IPR023696 Ureohydrolase domain superfamily VEA_000829 ba304ad4221c8933f56b81dc2fb6d994 306 TIGRFAM TIGR01230 agmatinase: agmatinase 25 299 1.0E-93 T 13-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 VEA_000829 ba304ad4221c8933f56b81dc2fb6d994 306 Pfam PF00491 Arginase family 33 298 1.7E-90 T 13-10-2018 IPR006035 Ureohydrolase GO:0046872 VEA_000829 ba304ad4221c8933f56b81dc2fb6d994 306 Gene3D G3DSA:3.40.800.10 1 305 1.9E-105 T 13-10-2018 VEA_000855 73ca1e86b08623c3fe64309fe3a69e8f 331 Gene3D G3DSA:3.40.50.720 103 298 3.5E-133 T 13-10-2018 VEA_000855 73ca1e86b08623c3fe64309fe3a69e8f 331 SUPERFAMILY SSF51735 103 299 5.34E-53 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_000855 73ca1e86b08623c3fe64309fe3a69e8f 331 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 175 - T 13-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 VEA_000855 73ca1e86b08623c3fe64309fe3a69e8f 331 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 195 217 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VEA_000855 73ca1e86b08623c3fe64309fe3a69e8f 331 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VEA_000855 73ca1e86b08623c3fe64309fe3a69e8f 331 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 298 7.6E-51 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VEA_000855 73ca1e86b08623c3fe64309fe3a69e8f 331 Gene3D G3DSA:3.40.50.720 4 318 3.5E-133 T 13-10-2018 VEA_000855 73ca1e86b08623c3fe64309fe3a69e8f 331 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 327 1.6E-34 T 13-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VEA_000855 73ca1e86b08623c3fe64309fe3a69e8f 331 SUPERFAMILY SSF52283 1 136 8.29E-42 T 13-10-2018 VEA_003521 474fb94f6a343e6b217d83469aed7b0d 288 Gene3D G3DSA:3.90.1200.10 102 288 1.8E-67 T 13-10-2018 VEA_003521 474fb94f6a343e6b217d83469aed7b0d 288 PIRSF PIRSF006221 1 288 1.2E-107 T 13-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 VEA_003521 474fb94f6a343e6b217d83469aed7b0d 288 Pfam PF03881 Fructosamine kinase 1 286 1.2E-125 T 13-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 VEA_003521 474fb94f6a343e6b217d83469aed7b0d 288 SUPERFAMILY SSF56112 3 282 3.21E-41 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily VEA_003521 474fb94f6a343e6b217d83469aed7b0d 288 Gene3D G3DSA:3.30.200.20 1 93 1.1E-21 T 13-10-2018 VEA_002591 b1e0ae7fa9d36726128c04bc5c7d9208 431 Pfam PF00202 Aminotransferase class-III 33 396 6.8E-76 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEA_002591 b1e0ae7fa9d36726128c04bc5c7d9208 431 Gene3D G3DSA:3.40.640.10 69 317 4.8E-179 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_002591 b1e0ae7fa9d36726128c04bc5c7d9208 431 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 105.904 T 13-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 VEA_002591 b1e0ae7fa9d36726128c04bc5c7d9208 431 Gene3D G3DSA:3.90.1150.10 7 419 4.8E-179 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEA_002591 b1e0ae7fa9d36726128c04bc5c7d9208 431 SUPERFAMILY SSF53383 2 424 2.7E-135 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_002591 b1e0ae7fa9d36726128c04bc5c7d9208 431 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 425 1.5E-194 T 13-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 VEA_002591 b1e0ae7fa9d36726128c04bc5c7d9208 431 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEA_003555 f7a0e8e0cfc588e28f659f3a888ccece 176 SUPERFAMILY SSF53098 4 175 9.28E-30 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VEA_003555 f7a0e8e0cfc588e28f659f3a888ccece 176 Gene3D G3DSA:3.30.420.10 1 176 8.7E-38 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VEA_003555 f7a0e8e0cfc588e28f659f3a888ccece 176 Pfam PF00929 Exonuclease 7 171 4.4E-12 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VEA_003555 f7a0e8e0cfc588e28f659f3a888ccece 176 SMART SM00479 5 176 6.7E-5 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VEA_002329 cea22342f3ebfff39d94e767b04b0ce7 504 Pfam PF05036 Sporulation related domain 417 490 1.0E-6 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 VEA_002329 cea22342f3ebfff39d94e767b04b0ce7 504 Pfam PF13401 AAA domain 27 128 7.3E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_002329 cea22342f3ebfff39d94e767b04b0ce7 504 SUPERFAMILY SSF52540 15 221 4.08E-9 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002329 cea22342f3ebfff39d94e767b04b0ce7 504 Gene3D G3DSA:3.30.70.1070 398 501 7.9E-26 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VEA_002329 cea22342f3ebfff39d94e767b04b0ce7 504 Gene3D G3DSA:3.40.50.300 10 162 9.9E-6 T 13-10-2018 VEA_004266 8b6a7bc43bc9282454d7266c75ac3040 149 Pfam PF03477 ATP cone domain 50 136 1.1E-17 T 13-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 VEA_004266 8b6a7bc43bc9282454d7266c75ac3040 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 90.022 T 13-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 VEA_004266 8b6a7bc43bc9282454d7266c75ac3040 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 4.3E-73 T 13-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 VEA_001859 c50d7360b0473361ff759b43925533ea 116 Gene3D G3DSA:3.30.420.270 42 110 4.8E-10 T 13-10-2018 VEA_001859 c50d7360b0473361ff759b43925533ea 116 Pfam PF02472 Biopolymer transport protein ExbD/TolR 1 114 2.8E-27 T 13-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 VEA_001666 f5a0a1bf6f45327da301750157ae73ea 126 Gene3D G3DSA:2.60.40.1470 1 126 1.4E-47 T 13-10-2018 IPR036767 ApaG domain superfamily VEA_001666 f5a0a1bf6f45327da301750157ae73ea 126 Pfam PF04379 ApaG domain 18 103 4.6E-34 T 13-10-2018 IPR007474 ApaG domain VEA_001666 f5a0a1bf6f45327da301750157ae73ea 126 SUPERFAMILY SSF110069 5 126 3.53E-47 T 13-10-2018 IPR036767 ApaG domain superfamily VEA_001666 f5a0a1bf6f45327da301750157ae73ea 126 Hamap MF_00791 Protein ApaG [apaG]. 1 126 31.946 T 13-10-2018 IPR023065 Uncharacterised protein family ApaG VEA_002971 7cf0ebe15f94746c5b9fbfe977e22693 311 Pfam PF02653 Branched-chain amino acid transport system / permease component 7 269 6.5E-28 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VEA_004357 15732268f2cc58e9c59b1c1f8bf512dd 171 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 25.267 T 13-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VEA_004357 15732268f2cc58e9c59b1c1f8bf512dd 171 Pfam PF00226 DnaJ domain 2 70 1.9E-7 T 13-10-2018 IPR001623 DnaJ domain VEA_004357 15732268f2cc58e9c59b1c1f8bf512dd 171 SMART SM00271 1 66 8.8E-10 T 13-10-2018 IPR001623 DnaJ domain VEA_004357 15732268f2cc58e9c59b1c1f8bf512dd 171 SUPERFAMILY SSF47144 78 170 3.53E-25 T 13-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VEA_004357 15732268f2cc58e9c59b1c1f8bf512dd 171 Gene3D G3DSA:1.20.1280.20 80 171 4.7E-28 T 13-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VEA_004357 15732268f2cc58e9c59b1c1f8bf512dd 171 Pfam PF07743 HSCB C-terminal oligomerisation domain 87 163 3.0E-19 T 13-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VEA_004357 15732268f2cc58e9c59b1c1f8bf512dd 171 SUPERFAMILY SSF46565 1 72 4.58E-17 T 13-10-2018 IPR036869 Chaperone J-domain superfamily VEA_004357 15732268f2cc58e9c59b1c1f8bf512dd 171 Gene3D G3DSA:1.10.287.110 1 79 1.1E-22 T 13-10-2018 IPR036869 Chaperone J-domain superfamily VEA_004357 15732268f2cc58e9c59b1c1f8bf512dd 171 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 169 1.0E-41 T 13-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VEA_002902 3d139b8746dda99e414c63088c19825d 525 PRINTS PR00113 Alkaline phosphatase signature 122 142 3.2E-37 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VEA_002902 3d139b8746dda99e414c63088c19825d 525 PRINTS PR00113 Alkaline phosphatase signature 26 46 3.2E-37 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VEA_002902 3d139b8746dda99e414c63088c19825d 525 PRINTS PR00113 Alkaline phosphatase signature 166 176 3.2E-37 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VEA_002902 3d139b8746dda99e414c63088c19825d 525 PRINTS PR00113 Alkaline phosphatase signature 85 100 3.2E-37 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VEA_002902 3d139b8746dda99e414c63088c19825d 525 PRINTS PR00113 Alkaline phosphatase signature 267 296 3.2E-37 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VEA_002902 3d139b8746dda99e414c63088c19825d 525 Gene3D G3DSA:1.10.1200.140 388 444 6.3E-28 T 13-10-2018 VEA_002902 3d139b8746dda99e414c63088c19825d 525 Pfam PF00245 Alkaline phosphatase 26 503 3.9E-83 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VEA_002902 3d139b8746dda99e414c63088c19825d 525 ProSitePatterns PS00123 Alkaline phosphatase active site. 85 93 - T 13-10-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VEA_002902 3d139b8746dda99e414c63088c19825d 525 Gene3D G3DSA:3.40.720.10 462 525 2.2E-7 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VEA_002902 3d139b8746dda99e414c63088c19825d 525 Gene3D G3DSA:3.40.720.10 24 381 2.6E-140 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VEA_002902 3d139b8746dda99e414c63088c19825d 525 SMART SM00098 27 415 2.0E-50 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VEA_002902 3d139b8746dda99e414c63088c19825d 525 SUPERFAMILY SSF53649 9 504 9.64E-114 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VEA_001594 8a87ff457e9299904150fac500de0037 413 Pfam PF00512 His Kinase A (phospho-acceptor) domain 222 282 2.6E-8 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_001594 8a87ff457e9299904150fac500de0037 413 Gene3D G3DSA:1.10.287.130 172 285 8.7E-12 T 13-10-2018 VEA_001594 8a87ff457e9299904150fac500de0037 413 SUPERFAMILY SSF47384 205 282 1.94E-10 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEA_001594 8a87ff457e9299904150fac500de0037 413 SUPERFAMILY SSF55874 294 400 2.46E-9 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_001594 8a87ff457e9299904150fac500de0037 413 Gene3D G3DSA:3.30.565.10 294 413 3.2E-5 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_001594 8a87ff457e9299904150fac500de0037 413 SMART SM00388 220 286 3.1E-7 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_003475 590110620abd0a6e7ecf0c38be9631c3 248 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 13-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 VEA_003475 590110620abd0a6e7ecf0c38be9631c3 248 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 1.8E-15 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain VEA_003475 590110620abd0a6e7ecf0c38be9631c3 248 SUPERFAMILY SSF51206 23 162 1.23E-31 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like VEA_003475 590110620abd0a6e7ecf0c38be9631c3 248 SUPERFAMILY SSF46785 165 245 1.18E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_003475 590110620abd0a6e7ecf0c38be9631c3 248 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 1.0E-10 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VEA_003475 590110620abd0a6e7ecf0c38be9631c3 248 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 1.0E-10 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VEA_003475 590110620abd0a6e7ecf0c38be9631c3 248 Gene3D G3DSA:2.60.120.10 43 164 5.0E-49 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VEA_003475 590110620abd0a6e7ecf0c38be9631c3 248 Pfam PF13545 Crp-like helix-turn-helix domain 168 241 1.3E-16 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VEA_003475 590110620abd0a6e7ecf0c38be9631c3 248 SMART SM00100 30 151 1.6E-20 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain VEA_003475 590110620abd0a6e7ecf0c38be9631c3 248 SMART SM00419 187 235 3.1E-14 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VEA_003475 590110620abd0a6e7ecf0c38be9631c3 248 Gene3D G3DSA:1.10.10.10 165 248 1.8E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000997 f0c4562b39d68fd9d3e6ea8e74dbbe3a 219 Gene3D G3DSA:2.160.10.10 1 218 5.2E-62 T 13-10-2018 VEA_000997 f0c4562b39d68fd9d3e6ea8e74dbbe3a 219 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 152 2.5E-9 T 13-10-2018 IPR001451 Hexapeptide repeat VEA_000997 f0c4562b39d68fd9d3e6ea8e74dbbe3a 219 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 127 155 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VEA_000997 f0c4562b39d68fd9d3e6ea8e74dbbe3a 219 SUPERFAMILY SSF51161 65 213 2.63E-36 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily VEA_002493 01ca3cb37359ad6a48607f5d49e8a52a 321 Gene3D G3DSA:3.30.200.100 218 317 1.4E-29 T 13-10-2018 IPR038484 MucB/RseB, C-terminal domain superfamily VEA_002493 01ca3cb37359ad6a48607f5d49e8a52a 321 PIRSF PIRSF005427 1 318 2.5E-83 T 13-10-2018 IPR005588 MucB/RseB VEA_002493 01ca3cb37359ad6a48607f5d49e8a52a 321 Pfam PF03888 MucB/RseB N-terminal domain 26 195 7.8E-57 T 13-10-2018 IPR033434 MucB/RseB, N-terminal VEA_002493 01ca3cb37359ad6a48607f5d49e8a52a 321 Gene3D G3DSA:2.50.20.10 24 208 1.2E-50 T 13-10-2018 VEA_002493 01ca3cb37359ad6a48607f5d49e8a52a 321 Pfam PF17188 MucB/RseB C-terminal domain 218 311 1.8E-28 T 13-10-2018 IPR033436 MucB/RseB, C-terminal VEA_004213 aba26245651cb2e99b11f7a15c42a37e 154 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 113 123 - T 13-10-2018 IPR020549 Endoribonuclease YbeY, conserved site VEA_004213 aba26245651cb2e99b11f7a15c42a37e 154 Gene3D G3DSA:3.40.390.30 1 154 1.1E-59 T 13-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 VEA_004213 aba26245651cb2e99b11f7a15c42a37e 154 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 147 24.537 T 13-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 VEA_004213 aba26245651cb2e99b11f7a15c42a37e 154 Pfam PF02130 Uncharacterized protein family UPF0054 20 142 1.4E-38 T 13-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 VEA_004213 aba26245651cb2e99b11f7a15c42a37e 154 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 39 143 1.5E-37 T 13-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 VEA_004213 aba26245651cb2e99b11f7a15c42a37e 154 SUPERFAMILY SSF55486 3 150 2.3E-49 T 13-10-2018 VEA_003372 75c35efb1591153b545295050d45c5a7 705 Gene3D G3DSA:3.40.30.60 369 514 2.2E-43 T 13-10-2018 VEA_003372 75c35efb1591153b545295050d45c5a7 705 TIGRFAM TIGR01399 hrcV: type III secretion protein, HrcV family 14 703 2.5E-298 T 13-10-2018 IPR006302 Type III secretion protein HrcV GO:0015031|GO:0016021 VEA_003372 75c35efb1591153b545295050d45c5a7 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 132 148 4.9E-56 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VEA_003372 75c35efb1591153b545295050d45c5a7 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 33 46 4.9E-56 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VEA_003372 75c35efb1591153b545295050d45c5a7 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 232 246 4.9E-56 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VEA_003372 75c35efb1591153b545295050d45c5a7 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 151 169 4.9E-56 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VEA_003372 75c35efb1591153b545295050d45c5a7 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 181 198 4.9E-56 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VEA_003372 75c35efb1591153b545295050d45c5a7 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 70 89 4.9E-56 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VEA_003372 75c35efb1591153b545295050d45c5a7 705 Gene3D G3DSA:1.10.8.540 515 603 2.7E-32 T 13-10-2018 VEA_003372 75c35efb1591153b545295050d45c5a7 705 Gene3D G3DSA:1.10.490.80 605 703 7.4E-34 T 13-10-2018 VEA_003372 75c35efb1591153b545295050d45c5a7 705 Pfam PF00771 FHIPEP family 26 695 5.3E-237 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VEA_003372 75c35efb1591153b545295050d45c5a7 705 PIRSF PIRSF005419 1 705 3.9E-264 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VEA_003372 75c35efb1591153b545295050d45c5a7 705 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 137 160 - T 13-10-2018 IPR025505 FHIPEP conserved site VEA_002440 feda11d5ce5fdc1bd9bf123ffb7d6993 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.4E-5 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEA_002440 feda11d5ce5fdc1bd9bf123ffb7d6993 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.4E-5 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEA_002440 feda11d5ce5fdc1bd9bf123ffb7d6993 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 4.7E-19 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEA_002440 feda11d5ce5fdc1bd9bf123ffb7d6993 332 Pfam PF13377 Periplasmic binding protein-like domain 168 318 3.1E-30 T 13-10-2018 VEA_002440 feda11d5ce5fdc1bd9bf123ffb7d6993 332 SMART SM00354 1 71 5.7E-31 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEA_002440 feda11d5ce5fdc1bd9bf123ffb7d6993 332 Gene3D G3DSA:3.40.50.2300 160 289 1.5E-67 T 13-10-2018 VEA_002440 feda11d5ce5fdc1bd9bf123ffb7d6993 332 Gene3D G3DSA:3.40.50.2300 55 304 1.5E-67 T 13-10-2018 VEA_002440 feda11d5ce5fdc1bd9bf123ffb7d6993 332 Gene3D G3DSA:1.10.260.40 1 54 1.2E-22 T 13-10-2018 VEA_002440 feda11d5ce5fdc1bd9bf123ffb7d6993 332 SUPERFAMILY SSF53822 61 325 3.85E-68 T 13-10-2018 IPR028082 Periplasmic binding protein-like I VEA_002440 feda11d5ce5fdc1bd9bf123ffb7d6993 332 SUPERFAMILY SSF47413 2 59 1.13E-17 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEA_001627 042705b47a81d3798bfddcaa935c5076 349 Pfam PF14321 Domain of unknown function (DUF4382) 32 200 6.8E-22 T 13-10-2018 IPR025491 Domain of unknown function DUF4382 VEA_003012 adf1acc987f5066b3381d3d12b902ea8 405 Gene3D G3DSA:1.10.10.10 2 81 5.5E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_003012 adf1acc987f5066b3381d3d12b902ea8 405 Pfam PF00480 ROK family 88 390 1.3E-70 T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VEA_003012 adf1acc987f5066b3381d3d12b902ea8 405 ProSitePatterns PS01125 ROK family signature. 218 245 - T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VEA_003012 adf1acc987f5066b3381d3d12b902ea8 405 SUPERFAMILY SSF53067 86 395 9.13E-55 T 13-10-2018 VEA_003012 adf1acc987f5066b3381d3d12b902ea8 405 Gene3D G3DSA:3.30.420.40 91 387 1.4E-109 T 13-10-2018 VEA_003012 adf1acc987f5066b3381d3d12b902ea8 405 SUPERFAMILY SSF46785 10 76 3.58E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_003012 adf1acc987f5066b3381d3d12b902ea8 405 Gene3D G3DSA:3.30.420.40 208 377 1.4E-109 T 13-10-2018 VEA_000775 8480fce3cac6ce4ba691942f2435762a 677 Pfam PF00082 Subtilase family 146 333 4.3E-28 T 13-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 VEA_000775 8480fce3cac6ce4ba691942f2435762a 677 PRINTS PR00723 Subtilisin serine protease family (S8) signature 142 161 7.1E-16 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related VEA_000775 8480fce3cac6ce4ba691942f2435762a 677 PRINTS PR00723 Subtilisin serine protease family (S8) signature 487 503 7.1E-16 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related VEA_000775 8480fce3cac6ce4ba691942f2435762a 677 PRINTS PR00723 Subtilisin serine protease family (S8) signature 182 195 7.1E-16 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related VEA_000775 8480fce3cac6ce4ba691942f2435762a 677 Gene3D G3DSA:2.60.120.260 562 677 2.8E-13 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily VEA_000775 8480fce3cac6ce4ba691942f2435762a 677 Pfam PF00082 Subtilase family 477 538 7.9E-14 T 13-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 VEA_000775 8480fce3cac6ce4ba691942f2435762a 677 Gene3D G3DSA:3.40.50.200 144 545 1.1E-158 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 VEA_000775 8480fce3cac6ce4ba691942f2435762a 677 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 488 498 - T 13-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site VEA_000775 8480fce3cac6ce4ba691942f2435762a 677 Pfam PF01483 Proprotein convertase P-domain 597 676 2.2E-21 T 13-10-2018 IPR002884 P domain GO:0004252|GO:0006508 VEA_000775 8480fce3cac6ce4ba691942f2435762a 677 Pfam PF02225 PA domain 379 465 1.0E-6 T 13-10-2018 IPR003137 PA domain VEA_000775 8480fce3cac6ce4ba691942f2435762a 677 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 186 196 - T 13-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site VEA_000775 8480fce3cac6ce4ba691942f2435762a 677 Gene3D G3DSA:3.50.30.30 335 480 1.1E-158 T 13-10-2018 VEA_000775 8480fce3cac6ce4ba691942f2435762a 677 SUPERFAMILY SSF49785 569 676 3.4E-20 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily VEA_000775 8480fce3cac6ce4ba691942f2435762a 677 Gene3D G3DSA:3.30.70.80 37 125 2.2E-5 T 13-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 VEA_000775 8480fce3cac6ce4ba691942f2435762a 677 Pfam PF05922 Peptidase inhibitor I9 43 120 2.9E-4 T 13-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 VEA_000775 8480fce3cac6ce4ba691942f2435762a 677 SUPERFAMILY SSF52743 123 546 2.61E-105 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 VEA_000792 eaedc8fc6eb8cacddfab213ebaa0a182 132 SUPERFAMILY SSF82784 1 131 1.2E-38 T 13-10-2018 IPR036102 OsmC/Ohr superfamily VEA_000792 eaedc8fc6eb8cacddfab213ebaa0a182 132 Pfam PF02566 OsmC-like protein 29 127 3.7E-17 T 13-10-2018 IPR003718 OsmC/Ohr family VEA_000792 eaedc8fc6eb8cacddfab213ebaa0a182 132 Gene3D G3DSA:3.30.300.20 35 132 7.3E-24 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta VEA_000792 eaedc8fc6eb8cacddfab213ebaa0a182 132 Gene3D G3DSA:2.20.25.10 1 34 2.3E-20 T 13-10-2018 VEA_003946 6b6e5f4ac3b61a5d29a26af39e6ab5b4 485 Pfam PF08323 Starch synthase catalytic domain 8 239 2.2E-67 T 13-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 VEA_003946 6b6e5f4ac3b61a5d29a26af39e6ab5b4 485 SUPERFAMILY SSF53756 4 485 2.8E-109 T 13-10-2018 VEA_003946 6b6e5f4ac3b61a5d29a26af39e6ab5b4 485 Pfam PF00534 Glycosyl transferases group 1 299 445 5.6E-15 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 VEA_003946 6b6e5f4ac3b61a5d29a26af39e6ab5b4 485 Hamap MF_00484 Glycogen synthase [glgA]. 6 483 39.339 T 13-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 VEA_003946 6b6e5f4ac3b61a5d29a26af39e6ab5b4 485 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 7 482 1.5E-167 T 13-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 VEA_003946 6b6e5f4ac3b61a5d29a26af39e6ab5b4 485 Gene3D G3DSA:3.40.50.2000 8 481 2.0E-157 T 13-10-2018 VEA_003946 6b6e5f4ac3b61a5d29a26af39e6ab5b4 485 Gene3D G3DSA:3.40.50.2000 256 467 2.0E-157 T 13-10-2018 VEA_003510 fa74542c42fdabbb2ec255f1de928853 302 Gene3D G3DSA:3.30.420.40 119 290 1.8E-100 T 13-10-2018 VEA_003510 fa74542c42fdabbb2ec255f1de928853 302 Gene3D G3DSA:3.30.420.40 4 297 1.8E-100 T 13-10-2018 VEA_003510 fa74542c42fdabbb2ec255f1de928853 302 Pfam PF00480 ROK family 2 300 2.0E-73 T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VEA_003510 fa74542c42fdabbb2ec255f1de928853 302 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 302 64.424 T 13-10-2018 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906 VEA_003510 fa74542c42fdabbb2ec255f1de928853 302 ProSitePatterns PS01125 ROK family signature. 130 157 - T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VEA_003510 fa74542c42fdabbb2ec255f1de928853 302 SUPERFAMILY SSF53067 1 299 2.34E-57 T 13-10-2018 VEA_001929 c3f5a9144190f53d1e706f902a03dc15 302 SUPERFAMILY SSF103481 65 144 3.92E-11 T 13-10-2018 VEA_001929 c3f5a9144190f53d1e706f902a03dc15 302 Pfam PF00892 EamA-like transporter family 155 286 1.3E-15 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEA_001929 c3f5a9144190f53d1e706f902a03dc15 302 Pfam PF00892 EamA-like transporter family 9 141 9.0E-17 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEA_001929 c3f5a9144190f53d1e706f902a03dc15 302 SUPERFAMILY SSF103481 189 291 2.75E-8 T 13-10-2018 VEA_004456 f240e756f053ed4e656f234457e4ef60 323 PRINTS PR00958 Homoserine kinase signature 108 123 1.0E-30 T 13-10-2018 VEA_004456 f240e756f053ed4e656f234457e4ef60 323 PRINTS PR00958 Homoserine kinase signature 265 280 1.0E-30 T 13-10-2018 VEA_004456 f240e756f053ed4e656f234457e4ef60 323 PRINTS PR00958 Homoserine kinase signature 15 30 1.0E-30 T 13-10-2018 VEA_004456 f240e756f053ed4e656f234457e4ef60 323 PRINTS PR00958 Homoserine kinase signature 148 161 1.0E-30 T 13-10-2018 VEA_004456 f240e756f053ed4e656f234457e4ef60 323 PRINTS PR00958 Homoserine kinase signature 186 203 1.0E-30 T 13-10-2018 VEA_004456 f240e756f053ed4e656f234457e4ef60 323 Pfam PF08544 GHMP kinases C terminal 223 296 2.0E-9 T 13-10-2018 IPR013750 GHMP kinase, C-terminal domain VEA_004456 f240e756f053ed4e656f234457e4ef60 323 TIGRFAM TIGR00191 thrB: homoserine kinase 8 319 5.7E-110 T 13-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 VEA_004456 f240e756f053ed4e656f234457e4ef60 323 Gene3D G3DSA:3.30.230.10 10 178 4.7E-89 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VEA_004456 f240e756f053ed4e656f234457e4ef60 323 Hamap MF_00384 Homoserine kinase [thrB]. 10 319 29.27 T 13-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 VEA_004456 f240e756f053ed4e656f234457e4ef60 323 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 101 112 - T 13-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 VEA_004456 f240e756f053ed4e656f234457e4ef60 323 SUPERFAMILY SSF55060 183 299 4.6E-33 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VEA_004456 f240e756f053ed4e656f234457e4ef60 323 PIRSF PIRSF000676 4 321 2.5E-80 T 13-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 VEA_004456 f240e756f053ed4e656f234457e4ef60 323 SUPERFAMILY SSF54211 8 196 5.09E-34 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEA_004456 f240e756f053ed4e656f234457e4ef60 323 Gene3D G3DSA:3.30.70.890 179 288 4.7E-89 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VEA_004456 f240e756f053ed4e656f234457e4ef60 323 Pfam PF00288 GHMP kinases N terminal domain 95 161 2.0E-13 T 13-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 VEA_003329 a5c31cabc9d2f1935a53137df6715b01 586 Gene3D G3DSA:3.30.450.40 4 188 1.3E-45 T 13-10-2018 IPR029016 GAF-like domain superfamily VEA_003329 a5c31cabc9d2f1935a53137df6715b01 586 SUPERFAMILY SSF46689 489 584 5.63E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_003329 a5c31cabc9d2f1935a53137df6715b01 586 Gene3D G3DSA:1.10.8.60 455 529 2.1E-10 T 13-10-2018 VEA_003329 a5c31cabc9d2f1935a53137df6715b01 586 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 304 317 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VEA_003329 a5c31cabc9d2f1935a53137df6715b01 586 SMART SM00382 300 444 2.2E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_003329 a5c31cabc9d2f1935a53137df6715b01 586 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 367 382 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VEA_003329 a5c31cabc9d2f1935a53137df6715b01 586 SUPERFAMILY SSF52540 284 511 1.12E-55 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003329 a5c31cabc9d2f1935a53137df6715b01 586 Pfam PF02954 Bacterial regulatory protein, Fis family 555 580 9.8E-8 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEA_003329 a5c31cabc9d2f1935a53137df6715b01 586 Pfam PF00158 Sigma-54 interaction domain 285 447 4.2E-61 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VEA_003329 a5c31cabc9d2f1935a53137df6715b01 586 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 548 565 1.1E-5 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEA_003329 a5c31cabc9d2f1935a53137df6715b01 586 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 565 585 1.1E-5 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEA_003329 a5c31cabc9d2f1935a53137df6715b01 586 Gene3D G3DSA:3.40.50.300 265 452 7.5E-57 T 13-10-2018 VEA_003329 a5c31cabc9d2f1935a53137df6715b01 586 Gene3D G3DSA:1.10.10.60 541 585 1.4E-9 T 13-10-2018 VEA_003329 a5c31cabc9d2f1935a53137df6715b01 586 Pfam PF01590 GAF domain 76 186 8.3E-9 T 13-10-2018 IPR003018 GAF domain GO:0005515 VEA_001777 0726fbf6a36672a78ce62b3db6204f5c 252 SUPERFAMILY SSF53448 4 248 3.75E-54 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEA_001777 0726fbf6a36672a78ce62b3db6204f5c 252 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 4 243 1.4E-75 T 13-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 VEA_001777 0726fbf6a36672a78ce62b3db6204f5c 252 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 2 250 36.834 T 13-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 VEA_001777 0726fbf6a36672a78ce62b3db6204f5c 252 Pfam PF02348 Cytidylyltransferase 6 221 2.9E-49 T 13-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 VEA_001777 0726fbf6a36672a78ce62b3db6204f5c 252 Gene3D G3DSA:3.90.550.10 1 250 4.2E-81 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEA_001709 3bab3143736e8485a99673dc0c80d220 653 SUPERFAMILY SSF56300 23 360 1.6E-88 T 13-10-2018 VEA_001709 3bab3143736e8485a99673dc0c80d220 653 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 29 653 0.0 T 13-10-2018 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 VEA_001709 3bab3143736e8485a99673dc0c80d220 653 ProSitePatterns PS00786 5'-nucleotidase signature 2. 115 126 - T 13-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEA_001709 3bab3143736e8485a99673dc0c80d220 653 PRINTS PR01607 Apyrase family signature 28 46 2.2E-28 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEA_001709 3bab3143736e8485a99673dc0c80d220 653 PRINTS PR01607 Apyrase family signature 434 457 2.2E-28 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEA_001709 3bab3143736e8485a99673dc0c80d220 653 PRINTS PR01607 Apyrase family signature 536 555 2.2E-28 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEA_001709 3bab3143736e8485a99673dc0c80d220 653 PRINTS PR01607 Apyrase family signature 221 238 2.2E-28 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEA_001709 3bab3143736e8485a99673dc0c80d220 653 PRINTS PR01607 Apyrase family signature 249 272 2.2E-28 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEA_001709 3bab3143736e8485a99673dc0c80d220 653 PRINTS PR01607 Apyrase family signature 289 309 2.2E-28 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEA_001709 3bab3143736e8485a99673dc0c80d220 653 SUPERFAMILY SSF55816 361 603 3.66E-36 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEA_001709 3bab3143736e8485a99673dc0c80d220 653 Pfam PF02872 5'-nucleotidase, C-terminal domain 362 554 1.1E-20 T 13-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEA_001709 3bab3143736e8485a99673dc0c80d220 653 Pfam PF00149 Calcineurin-like phosphoesterase 30 265 1.6E-11 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VEA_001709 3bab3143736e8485a99673dc0c80d220 653 Gene3D G3DSA:3.90.780.10 415 592 1.1E-48 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VEA_001709 3bab3143736e8485a99673dc0c80d220 653 Gene3D G3DSA:3.60.21.10 22 360 1.7E-137 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like VEA_003595 36993be201dc866c637b20492020fa32 257 SMART SM00420 6 58 0.0011 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEA_003595 36993be201dc866c637b20492020fa32 257 Pfam PF08220 DeoR-like helix-turn-helix domain 14 57 2.0E-8 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEA_003595 36993be201dc866c637b20492020fa32 257 Pfam PF00455 DeoR C terminal sensor domain 75 234 2.1E-40 T 13-10-2018 IPR014036 DeoR C-terminal sensor domain VEA_003595 36993be201dc866c637b20492020fa32 257 SUPERFAMILY SSF100950 75 235 1.67E-21 T 13-10-2018 IPR037171 NagB/RpiA transferase-like VEA_003595 36993be201dc866c637b20492020fa32 257 SUPERFAMILY SSF46785 4 71 2.54E-5 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_003595 36993be201dc866c637b20492020fa32 257 SMART SM01134 71 235 3.5E-48 T 13-10-2018 VEA_001071 12c1964391c193cce7c8d2e8e7a62725 323 Gene3D G3DSA:1.10.3470.10 2 322 3.2E-96 T 13-10-2018 IPR037294 ABC transporter, BtuC-like VEA_001071 12c1964391c193cce7c8d2e8e7a62725 323 Pfam PF01032 FecCD transport family 13 319 1.8E-93 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VEA_001071 12c1964391c193cce7c8d2e8e7a62725 323 SUPERFAMILY SSF81345 5 319 3.92E-80 T 13-10-2018 IPR037294 ABC transporter, BtuC-like VEA_003697 810dc990bdc553a92c4fa1726332a67f 124 Hamap MF_01144 UPF0299 membrane protein YohJ [yohJ]. 5 124 21.791 T 13-10-2018 IPR022957 Uncharacterised protein family UPF0299 VEA_003697 810dc990bdc553a92c4fa1726332a67f 124 Pfam PF03788 LrgA family 25 115 1.1E-24 T 13-10-2018 IPR005538 LrgA/CidA family GO:0016021 VEA_001874 7c6e8f7aee47ddb0e41bb797a021bfce 773 Pfam PF16921 Tex protein YqgF-like domain 327 451 4.6E-56 T 13-10-2018 IPR032639 Tex protein, YqgF-like domain VEA_001874 7c6e8f7aee47ddb0e41bb797a021bfce 773 Pfam PF09371 Tex-like protein N-terminal domain 9 192 6.5E-72 T 13-10-2018 IPR018974 Tex-like protein, N-terminal VEA_001874 7c6e8f7aee47ddb0e41bb797a021bfce 773 Gene3D G3DSA:1.10.150.310 499 630 5.0E-50 T 13-10-2018 VEA_001874 7c6e8f7aee47ddb0e41bb797a021bfce 773 SUPERFAMILY SSF53098 322 469 5.39E-51 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VEA_001874 7c6e8f7aee47ddb0e41bb797a021bfce 773 Gene3D G3DSA:1.10.10.650 2 109 1.8E-41 T 13-10-2018 IPR023319 Tex-like protein, HTH domain superfamily VEA_001874 7c6e8f7aee47ddb0e41bb797a021bfce 773 SUPERFAMILY SSF47781 560 632 3.56E-19 T 13-10-2018 IPR010994 RuvA domain 2-like VEA_001874 7c6e8f7aee47ddb0e41bb797a021bfce 773 SUPERFAMILY SSF158832 3 321 9.29E-122 T 13-10-2018 VEA_001874 7c6e8f7aee47ddb0e41bb797a021bfce 773 Gene3D G3DSA:2.40.50.140 631 726 1.3E-29 T 13-10-2018 VEA_001874 7c6e8f7aee47ddb0e41bb797a021bfce 773 SUPERFAMILY SSF47781 470 557 1.45E-26 T 13-10-2018 IPR010994 RuvA domain 2-like VEA_001874 7c6e8f7aee47ddb0e41bb797a021bfce 773 Gene3D G3DSA:3.30.420.140 325 451 2.7E-158 T 13-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 VEA_001874 7c6e8f7aee47ddb0e41bb797a021bfce 773 SMART SM00316 649 720 5.4E-25 T 13-10-2018 IPR022967 RNA-binding domain, S1 VEA_001874 7c6e8f7aee47ddb0e41bb797a021bfce 773 Pfam PF00575 S1 RNA binding domain 649 720 4.5E-21 T 13-10-2018 IPR003029 S1 domain GO:0003676 VEA_001874 7c6e8f7aee47ddb0e41bb797a021bfce 773 Pfam PF12836 Helix-hairpin-helix motif 491 555 2.8E-27 T 13-10-2018 VEA_001874 7c6e8f7aee47ddb0e41bb797a021bfce 773 SUPERFAMILY SSF50249 638 723 1.42E-24 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_001874 7c6e8f7aee47ddb0e41bb797a021bfce 773 SMART SM00732 326 424 1.0E-37 T 13-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 VEA_001874 7c6e8f7aee47ddb0e41bb797a021bfce 773 Gene3D G3DSA:1.10.3500.10 112 498 2.7E-158 T 13-10-2018 IPR023323 Tex-like domain superfamily VEA_003696 8589daf32a8294d30c45d29084b15439 473 Pfam PF00929 Exonuclease 11 190 7.8E-25 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VEA_003696 8589daf32a8294d30c45d29084b15439 473 SMART SM00479 8 201 0.0017 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VEA_003696 8589daf32a8294d30c45d29084b15439 473 PIRSF PIRSF000977 1 473 3.1E-198 T 13-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 VEA_003696 8589daf32a8294d30c45d29084b15439 473 Gene3D G3DSA:1.20.1280.70 357 418 3.2E-29 T 13-10-2018 VEA_003696 8589daf32a8294d30c45d29084b15439 473 SUPERFAMILY SSF53098 7 471 5.31E-140 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VEA_003696 8589daf32a8294d30c45d29084b15439 473 Gene3D G3DSA:3.30.420.10 1 199 4.3E-72 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VEA_003696 8589daf32a8294d30c45d29084b15439 473 Gene3D G3DSA:2.30.30.450 212 350 2.9E-56 T 13-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily VEA_003696 8589daf32a8294d30c45d29084b15439 473 Pfam PF08411 Exonuclease C-terminal 210 469 6.3E-104 T 13-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 VEA_001925 ee68acc494212e1a05e2933f8f496e23 544 SUPERFAMILY SSF56112 94 436 2.82E-46 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily VEA_001925 ee68acc494212e1a05e2933f8f496e23 544 Pfam PF03109 ABC1 family 112 230 3.2E-36 T 13-10-2018 IPR004147 UbiB domain VEA_001925 ee68acc494212e1a05e2933f8f496e23 544 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 539 56.574 T 13-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 VEA_001925 ee68acc494212e1a05e2933f8f496e23 544 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 445 1.3E-175 T 13-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 VEA_000393 1210756981c6667fb3b191e3f50523ab 261 Gene3D G3DSA:3.30.1330.80 31 247 2.6E-80 T 13-10-2018 VEA_000393 1210756981c6667fb3b191e3f50523ab 261 SUPERFAMILY SSF117856 30 260 3.4E-85 T 13-10-2018 VEA_000393 1210756981c6667fb3b191e3f50523ab 261 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 30 260 5.0E-98 T 13-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 VEA_000393 1210756981c6667fb3b191e3f50523ab 261 PIRSF PIRSF001332 15 261 1.2E-94 T 13-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 VEA_000393 1210756981c6667fb3b191e3f50523ab 261 Pfam PF03306 Alpha-acetolactate decarboxylase 31 248 4.5E-84 T 13-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 VEA_000393 1210756981c6667fb3b191e3f50523ab 261 Gene3D G3DSA:3.30.1330.80 106 228 2.6E-80 T 13-10-2018 VEA_000584 ba4e47ba21159d64ef89dd0394380920 310 SUPERFAMILY SSF55347 121 264 5.56E-48 T 13-10-2018 VEA_000584 ba4e47ba21159d64ef89dd0394380920 310 SUPERFAMILY SSF51735 1 165 2.27E-40 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_000584 ba4e47ba21159d64ef89dd0394380920 310 Gene3D G3DSA:3.40.50.720 1 118 4.7E-28 T 13-10-2018 VEA_000584 ba4e47ba21159d64ef89dd0394380920 310 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 119 3.4E-16 T 13-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 VEA_000584 ba4e47ba21159d64ef89dd0394380920 310 Gene3D G3DSA:3.30.360.10 119 310 1.3E-56 T 13-10-2018 VEA_003015 af59fa175045cd2365db4da5a7482fe7 467 SUPERFAMILY SSF56672 6 225 5.6E-32 T 13-10-2018 VEA_003015 af59fa175045cd2365db4da5a7482fe7 467 Gene3D G3DSA:1.10.150.20 167 207 1.0E-7 T 13-10-2018 VEA_003015 af59fa175045cd2365db4da5a7482fe7 467 Pfam PF00817 impB/mucB/samB family 23 146 3.5E-8 T 13-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 VEA_003015 af59fa175045cd2365db4da5a7482fe7 467 Gene3D G3DSA:2.30.40.20 25 68 1.0E-7 T 13-10-2018 VEA_003015 af59fa175045cd2365db4da5a7482fe7 467 Gene3D G3DSA:3.30.70.270 69 166 1.0E-7 T 13-10-2018 VEA_002027 197be3d02d1cd39579ae7b716a3dca85 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 8.9E-54 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_002027 197be3d02d1cd39579ae7b716a3dca85 177 Gene3D G3DSA:1.10.520.20 2 106 1.6E-38 T 13-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_002027 197be3d02d1cd39579ae7b716a3dca85 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 13-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_002027 197be3d02d1cd39579ae7b716a3dca85 177 SUPERFAMILY SSF47928 3 105 3.14E-28 T 13-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_002027 197be3d02d1cd39579ae7b716a3dca85 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 7.3E-67 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_002027 197be3d02d1cd39579ae7b716a3dca85 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 1.3E-28 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_002027 197be3d02d1cd39579ae7b716a3dca85 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 1.3E-28 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_002027 197be3d02d1cd39579ae7b716a3dca85 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 1.3E-28 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_002027 197be3d02d1cd39579ae7b716a3dca85 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 1.3E-28 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_002027 197be3d02d1cd39579ae7b716a3dca85 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 1.3E-28 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_002027 197be3d02d1cd39579ae7b716a3dca85 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 19.188 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_001738 1dc3f83136094783a7b663c808a99eff 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 6.9E-25 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001738 1dc3f83136094783a7b663c808a99eff 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 6.9E-25 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001738 1dc3f83136094783a7b663c808a99eff 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 6.9E-25 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001738 1dc3f83136094783a7b663c808a99eff 92 Pfam PF00203 Ribosomal protein S19 3 83 1.9E-36 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001738 1dc3f83136094783a7b663c808a99eff 92 Gene3D G3DSA:3.30.860.10 1 92 6.4E-44 T 13-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001738 1dc3f83136094783a7b663c808a99eff 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.757 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001738 1dc3f83136094783a7b663c808a99eff 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.1E-46 T 13-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 VEA_001738 1dc3f83136094783a7b663c808a99eff 92 SUPERFAMILY SSF54570 3 84 1.01E-35 T 13-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001738 1dc3f83136094783a7b663c808a99eff 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 13-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001738 1dc3f83136094783a7b663c808a99eff 92 PIRSF PIRSF002144 1 92 1.1E-31 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_003916 7ba7f78551c20980a58eb776b0d5cc73 211 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 1 204 38.054 T 13-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 VEA_003916 7ba7f78551c20980a58eb776b0d5cc73 211 Pfam PF01618 MotA/TolQ/ExbB proton channel family 59 186 4.2E-43 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VEA_003916 7ba7f78551c20980a58eb776b0d5cc73 211 TIGRFAM TIGR02796 tolQ: protein TolQ 1 199 1.0E-85 T 13-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 VEA_002483 d4ebd585f789dd740cf79719a4f4a045 192 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 5 190 32.452 T 13-10-2018 IPR011978 Uncharacterised protein family UPF0149 VEA_002483 d4ebd585f789dd740cf79719a4f4a045 192 Gene3D G3DSA:1.20.120.740 4 192 9.6E-48 T 13-10-2018 VEA_002483 d4ebd585f789dd740cf79719a4f4a045 192 Pfam PF03695 Uncharacterised protein family (UPF0149) 12 179 1.9E-35 T 13-10-2018 IPR011978 Uncharacterised protein family UPF0149 VEA_002483 d4ebd585f789dd740cf79719a4f4a045 192 SUPERFAMILY SSF101327 6 178 6.8E-45 T 13-10-2018 IPR036255 YgfB-like superfamily VEA_004360 19c6875af7912ddb5f02f99f9049acc9 404 PIRSF PIRSF005572 2 384 8.2E-137 T 13-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 VEA_004360 19c6875af7912ddb5f02f99f9049acc9 404 Gene3D G3DSA:3.90.1150.10 5 375 3.4E-168 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEA_004360 19c6875af7912ddb5f02f99f9049acc9 404 Gene3D G3DSA:3.40.640.10 16 262 3.4E-168 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_004360 19c6875af7912ddb5f02f99f9049acc9 404 Pfam PF00266 Aminotransferase class-V 5 368 1.5E-89 T 13-10-2018 IPR000192 Aminotransferase class V domain VEA_004360 19c6875af7912ddb5f02f99f9049acc9 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 6.3E-230 T 13-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 VEA_004360 19c6875af7912ddb5f02f99f9049acc9 404 SUPERFAMILY SSF53383 5 391 1.29E-116 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_004360 19c6875af7912ddb5f02f99f9049acc9 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 13-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VEA_004360 19c6875af7912ddb5f02f99f9049acc9 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 54.524 T 13-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 VEA_003325 b992ef9d6ab536d6d5e04ddc6bb9d699 482 SMART SM01350 179 469 6.3E-215 T 13-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VEA_003325 b992ef9d6ab536d6d5e04ddc6bb9d699 482 SUPERFAMILY SSF48179 177 472 1.29E-126 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VEA_003325 b992ef9d6ab536d6d5e04ddc6bb9d699 482 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 4 469 1.7E-234 T 13-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VEA_003325 b992ef9d6ab536d6d5e04ddc6bb9d699 482 Gene3D G3DSA:3.40.50.720 1 180 2.1E-56 T 13-10-2018 VEA_003325 b992ef9d6ab536d6d5e04ddc6bb9d699 482 SUPERFAMILY SSF51735 4 174 6.37E-56 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_003325 b992ef9d6ab536d6d5e04ddc6bb9d699 482 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 468 2.2E-126 T 13-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VEA_003325 b992ef9d6ab536d6d5e04ddc6bb9d699 482 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 13-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VEA_003325 b992ef9d6ab536d6d5e04ddc6bb9d699 482 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 169 5.6E-51 T 13-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 VEA_003325 b992ef9d6ab536d6d5e04ddc6bb9d699 482 PIRSF PIRSF000109 1 477 2.2E-241 T 13-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VEA_003325 b992ef9d6ab536d6d5e04ddc6bb9d699 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 3.5E-85 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VEA_003325 b992ef9d6ab536d6d5e04ddc6bb9d699 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 3.5E-85 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VEA_003325 b992ef9d6ab536d6d5e04ddc6bb9d699 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 3.5E-85 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VEA_003325 b992ef9d6ab536d6d5e04ddc6bb9d699 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 3.5E-85 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VEA_003325 b992ef9d6ab536d6d5e04ddc6bb9d699 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 3 26 3.5E-85 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VEA_003325 b992ef9d6ab536d6d5e04ddc6bb9d699 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 3.5E-85 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VEA_003325 b992ef9d6ab536d6d5e04ddc6bb9d699 482 Gene3D G3DSA:1.10.1040.10 181 434 4.6E-103 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VEA_003325 b992ef9d6ab536d6d5e04ddc6bb9d699 482 Gene3D G3DSA:1.20.5.320 435 482 8.7E-25 T 13-10-2018 VEA_000818 f69f9eb400cec185aab145c577f8e259 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 292 306 1.5E-14 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VEA_000818 f69f9eb400cec185aab145c577f8e259 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 356 364 1.5E-14 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VEA_000818 f69f9eb400cec185aab145c577f8e259 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 398 415 1.5E-14 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VEA_000818 f69f9eb400cec185aab145c577f8e259 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 377 388 1.5E-14 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VEA_000818 f69f9eb400cec185aab145c577f8e259 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 423 435 1.5E-14 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VEA_000818 f69f9eb400cec185aab145c577f8e259 463 SUPERFAMILY SSF51445 1 455 5.44E-158 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VEA_000818 f69f9eb400cec185aab145c577f8e259 463 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 13-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site VEA_000818 f69f9eb400cec185aab145c577f8e259 463 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 356 364 - T 13-10-2018 IPR018120 Glycoside hydrolase family 1, active site VEA_000818 f69f9eb400cec185aab145c577f8e259 463 Pfam PF00232 Glycosyl hydrolase family 1 3 457 1.7E-147 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VEA_000818 f69f9eb400cec185aab145c577f8e259 463 Gene3D G3DSA:3.20.20.80 1 460 1.4E-150 T 13-10-2018 VEA_003393 50009baf8bba59cea8718801248bc855 158 Pfam PF00583 Acetyltransferase (GNAT) family 28 146 5.3E-17 T 13-10-2018 IPR000182 GNAT domain VEA_003393 50009baf8bba59cea8718801248bc855 158 Gene3D G3DSA:3.40.630.30 3 137 6.5E-32 T 13-10-2018 VEA_003393 50009baf8bba59cea8718801248bc855 158 SUPERFAMILY SSF55729 1 147 9.98E-26 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_000012 ff5c73e5c5ffab530723fb652bf87b3b 397 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 3 394 7.8E-112 T 13-10-2018 IPR017735 Type VI secretion system, FHA domain-containing protein VEA_000012 ff5c73e5c5ffab530723fb652bf87b3b 397 SMART SM00240 31 82 1.9E-8 T 13-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 VEA_000012 ff5c73e5c5ffab530723fb652bf87b3b 397 Gene3D G3DSA:2.60.200.20 4 123 8.6E-21 T 13-10-2018 VEA_000012 ff5c73e5c5ffab530723fb652bf87b3b 397 Pfam PF00498 FHA domain 32 101 2.7E-15 T 13-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 VEA_000012 ff5c73e5c5ffab530723fb652bf87b3b 397 SUPERFAMILY SSF49879 28 110 2.87E-21 T 13-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 VEA_000093 0d052315fa6b7929025157422fe8face 276 Pfam PF02634 FdhD/NarQ family 42 273 6.3E-62 T 13-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 VEA_000093 0d052315fa6b7929025157422fe8face 276 Gene3D G3DSA:3.40.140.10 137 275 3.0E-38 T 13-10-2018 VEA_000093 0d052315fa6b7929025157422fe8face 276 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 39 273 1.6E-46 T 13-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 VEA_000093 0d052315fa6b7929025157422fe8face 276 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 18 276 25.408 T 13-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 VEA_000093 0d052315fa6b7929025157422fe8face 276 Gene3D G3DSA:3.10.20.10 43 128 4.0E-8 T 13-10-2018 VEA_000093 0d052315fa6b7929025157422fe8face 276 PIRSF PIRSF015626 20 276 2.2E-65 T 13-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 VEA_000093 0d052315fa6b7929025157422fe8face 276 SUPERFAMILY SSF53927 36 274 9.02E-67 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VEA_000377 94c0550f45498ff2a488aa373b622f0a 389 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 131 143 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 VEA_000377 94c0550f45498ff2a488aa373b622f0a 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 14 125 5.1E-36 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 VEA_000377 94c0550f45498ff2a488aa373b622f0a 389 PIRSF PIRSF016578 8 111 0.018 T 13-10-2018 VEA_000377 94c0550f45498ff2a488aa373b622f0a 389 PIRSF PIRSF016578 145 389 3.2E-9 T 13-10-2018 VEA_000377 94c0550f45498ff2a488aa373b622f0a 389 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 343 362 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 VEA_000377 94c0550f45498ff2a488aa373b622f0a 389 Gene3D G3DSA:1.20.140.10 242 389 1.5E-47 T 13-10-2018 VEA_000377 94c0550f45498ff2a488aa373b622f0a 389 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 224 8.6E-26 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 VEA_000377 94c0550f45498ff2a488aa373b622f0a 389 Gene3D G3DSA:1.10.540.10 2 127 2.0E-44 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 VEA_000377 94c0550f45498ff2a488aa373b622f0a 389 SUPERFAMILY SSF56645 6 249 3.4E-85 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 VEA_000377 94c0550f45498ff2a488aa373b622f0a 389 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 384 2.6E-43 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VEA_000377 94c0550f45498ff2a488aa373b622f0a 389 Gene3D G3DSA:2.40.110.10 128 241 1.7E-46 T 13-10-2018 VEA_000377 94c0550f45498ff2a488aa373b622f0a 389 SUPERFAMILY SSF47203 234 387 3.54E-48 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 VEA_001312 c3fa198f509f57355db9d165e95c49d3 205 SUPERFAMILY SSF47616 72 198 1.39E-19 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VEA_001312 c3fa198f509f57355db9d165e95c49d3 205 SUPERFAMILY SSF52833 1 77 8.98E-19 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VEA_001312 c3fa198f509f57355db9d165e95c49d3 205 Gene3D G3DSA:3.40.30.10 1 82 7.2E-31 T 13-10-2018 VEA_001312 c3fa198f509f57355db9d165e95c49d3 205 Pfam PF00043 Glutathione S-transferase, C-terminal domain 125 192 2.1E-8 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal VEA_001312 c3fa198f509f57355db9d165e95c49d3 205 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 73 2.9E-15 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VEA_001312 c3fa198f509f57355db9d165e95c49d3 205 Gene3D G3DSA:1.20.1050.10 84 198 8.2E-32 T 13-10-2018 VEA_002186 0d3422ec3af24838bde69bd7d69a40dc 132 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 132 9.8E-68 T 13-10-2018 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 VEA_002186 0d3422ec3af24838bde69bd7d69a40dc 132 Pfam PF00376 MerR family regulatory protein 4 40 5.4E-16 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEA_002186 0d3422ec3af24838bde69bd7d69a40dc 132 Pfam PF09278 MerR, DNA binding 47 109 3.8E-17 T 13-10-2018 IPR015358 Transcription regulator MerR, DNA binding VEA_002186 0d3422ec3af24838bde69bd7d69a40dc 132 SUPERFAMILY SSF46955 2 121 2.2E-33 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily VEA_002186 0d3422ec3af24838bde69bd7d69a40dc 132 SMART SM00422 2 71 1.2E-29 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEA_002186 0d3422ec3af24838bde69bd7d69a40dc 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 2.9E-10 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEA_002186 0d3422ec3af24838bde69bd7d69a40dc 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 2.9E-10 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEA_002186 0d3422ec3af24838bde69bd7d69a40dc 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 2.9E-10 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEA_002186 0d3422ec3af24838bde69bd7d69a40dc 132 Gene3D G3DSA:1.10.1660.10 1 129 2.1E-35 T 13-10-2018 VEA_003097 e1f693d660f814b47b6c265a8f94d003 787 Pfam PF00136 DNA polymerase family B 379 739 3.9E-41 T 13-10-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_003097 e1f693d660f814b47b6c265a8f94d003 787 Gene3D G3DSA:3.30.70.2250 41 108 1.9E-39 T 13-10-2018 VEA_003097 e1f693d660f814b47b6c265a8f94d003 787 SMART SM00486 153 558 6.0E-68 T 13-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_003097 e1f693d660f814b47b6c265a8f94d003 787 Gene3D G3DSA:3.90.1600.10 348 439 9.1E-29 T 13-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_003097 e1f693d660f814b47b6c265a8f94d003 787 Gene3D G3DSA:3.90.1600.10 440 636 4.3E-56 T 13-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_003097 e1f693d660f814b47b6c265a8f94d003 787 SUPERFAMILY SSF56672 385 780 7.79E-117 T 13-10-2018 VEA_003097 e1f693d660f814b47b6c265a8f94d003 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 415 428 1.6E-10 T 13-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_003097 e1f693d660f814b47b6c265a8f94d003 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 544 552 1.6E-10 T 13-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_003097 e1f693d660f814b47b6c265a8f94d003 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 492 504 1.6E-10 T 13-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_003097 e1f693d660f814b47b6c265a8f94d003 787 Gene3D G3DSA:1.10.132.60 643 787 3.1E-60 T 13-10-2018 VEA_003097 e1f693d660f814b47b6c265a8f94d003 787 Pfam PF03104 DNA polymerase family B, exonuclease domain 76 296 3.8E-19 T 13-10-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_003097 e1f693d660f814b47b6c265a8f94d003 787 ProSitePatterns PS00116 DNA polymerase family B signature. 546 554 - T 13-10-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_003097 e1f693d660f814b47b6c265a8f94d003 787 Gene3D G3DSA:3.30.420.10 156 347 4.0E-70 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VEA_003097 e1f693d660f814b47b6c265a8f94d003 787 Gene3D G3DSA:2.40.50.590 6 153 1.9E-39 T 13-10-2018 VEA_003097 e1f693d660f814b47b6c265a8f94d003 787 SUPERFAMILY SSF53098 4 389 2.14E-89 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VEA_003337 879253026d68611360e052a8e45baeb9 604 Gene3D G3DSA:3.30.1370.120 93 161 2.2E-13 T 13-10-2018 IPR038591 NolW-like superfamily VEA_003337 879253026d68611360e052a8e45baeb9 604 Pfam PF03958 Bacterial type II/III secretion system short domain 169 273 3.0E-15 T 13-10-2018 IPR005644 NolW-like VEA_003337 879253026d68611360e052a8e45baeb9 604 Gene3D G3DSA:3.55.50.30 8 92 4.1E-29 T 13-10-2018 VEA_003337 879253026d68611360e052a8e45baeb9 604 Gene3D G3DSA:3.30.1370.120 168 273 1.1E-9 T 13-10-2018 IPR038591 NolW-like superfamily VEA_003337 879253026d68611360e052a8e45baeb9 604 TIGRFAM TIGR02516 type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family 21 508 1.0E-153 T 13-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 VEA_003337 879253026d68611360e052a8e45baeb9 604 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 453 486 - T 13-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 VEA_003337 879253026d68611360e052a8e45baeb9 604 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 181 198 2.1E-38 T 13-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 VEA_003337 879253026d68611360e052a8e45baeb9 604 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 486 505 2.1E-38 T 13-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 VEA_003337 879253026d68611360e052a8e45baeb9 604 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 394 409 2.1E-38 T 13-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 VEA_003337 879253026d68611360e052a8e45baeb9 604 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 276 296 2.1E-38 T 13-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 VEA_003337 879253026d68611360e052a8e45baeb9 604 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 360 379 2.1E-38 T 13-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 VEA_003337 879253026d68611360e052a8e45baeb9 604 Pfam PF00263 Bacterial type II and III secretion system protein 347 507 2.5E-36 T 13-10-2018 IPR004846 Type II/III secretion system GO:0009306 VEA_000675 b8e30a13cdd5e239712f0a32a92a5247 143 Pfam PF09278 MerR, DNA binding 45 109 3.8E-17 T 13-10-2018 IPR015358 Transcription regulator MerR, DNA binding VEA_000675 b8e30a13cdd5e239712f0a32a92a5247 143 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 2 140 4.9E-67 T 13-10-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 VEA_000675 b8e30a13cdd5e239712f0a32a92a5247 143 SMART SM00422 3 71 5.9E-25 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEA_000675 b8e30a13cdd5e239712f0a32a92a5247 143 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 2.0E-13 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEA_000675 b8e30a13cdd5e239712f0a32a92a5247 143 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 2.0E-13 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEA_000675 b8e30a13cdd5e239712f0a32a92a5247 143 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 2.0E-13 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEA_000675 b8e30a13cdd5e239712f0a32a92a5247 143 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEA_000675 b8e30a13cdd5e239712f0a32a92a5247 143 Pfam PF00376 MerR family regulatory protein 4 40 2.9E-13 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEA_000675 b8e30a13cdd5e239712f0a32a92a5247 143 SUPERFAMILY SSF46955 4 124 4.4E-28 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily VEA_000675 b8e30a13cdd5e239712f0a32a92a5247 143 Gene3D G3DSA:1.10.1660.10 1 126 3.4E-33 T 13-10-2018 VEA_000656 7930a92fd13d7c285f09c19a6606c40f 500 SUPERFAMILY SSF56954 3 487 3.01E-89 T 13-10-2018 VEA_000656 7930a92fd13d7c285f09c19a6606c40f 500 Pfam PF02321 Outer membrane efflux protein 304 483 2.3E-20 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VEA_000656 7930a92fd13d7c285f09c19a6606c40f 500 Pfam PF02321 Outer membrane efflux protein 62 273 3.8E-17 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VEA_000656 7930a92fd13d7c285f09c19a6606c40f 500 Gene3D G3DSA:2.20.200.10 99 374 3.3E-107 T 13-10-2018 VEA_000656 7930a92fd13d7c285f09c19a6606c40f 500 Gene3D G3DSA:1.20.1600.10 53 486 3.3E-107 T 13-10-2018 VEA_000656 7930a92fd13d7c285f09c19a6606c40f 500 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 10 484 1.8E-78 T 13-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 VEA_002439 22552c6596494669d44e44a1dab7752c 251 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 1 239 38.644 T 13-10-2018 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 VEA_002439 22552c6596494669d44e44a1dab7752c 251 Gene3D G3DSA:3.20.20.370 1 244 1.7E-69 T 13-10-2018 VEA_002439 22552c6596494669d44e44a1dab7752c 251 SUPERFAMILY SSF88713 1 242 1.04E-66 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VEA_002439 22552c6596494669d44e44a1dab7752c 251 Pfam PF04794 YdjC-like protein 2 230 1.5E-50 T 13-10-2018 IPR006879 Carbohydrate deacetylase YdjC-like VEA_001718 320fb20e346661184450aecd575cb715 206 Pfam PF01479 S4 domain 97 143 2.5E-18 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001718 320fb20e346661184450aecd575cb715 206 SMART SM01390 3 95 6.8E-50 T 13-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 VEA_001718 320fb20e346661184450aecd575cb715 206 SUPERFAMILY SSF55174 3 206 1.01E-72 T 13-10-2018 VEA_001718 320fb20e346661184450aecd575cb715 206 Gene3D G3DSA:3.10.290.10 103 191 2.2E-36 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VEA_001718 320fb20e346661184450aecd575cb715 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 1.6E-32 T 13-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 VEA_001718 320fb20e346661184450aecd575cb715 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 13-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001718 320fb20e346661184450aecd575cb715 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.363 T 13-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 VEA_001718 320fb20e346661184450aecd575cb715 206 Gene3D G3DSA:1.10.1050.10 1 102 5.8E-45 T 13-10-2018 VEA_001718 320fb20e346661184450aecd575cb715 206 SMART SM00363 96 160 5.9E-20 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001718 320fb20e346661184450aecd575cb715 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 3.4E-85 T 13-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 VEA_004040 2fcea7c1f978f2cffdbd14b4881009b3 619 Pfam PF13624 SurA N-terminal domain 1 166 6.8E-51 T 13-10-2018 VEA_004040 2fcea7c1f978f2cffdbd14b4881009b3 619 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 299 320 - T 13-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 VEA_004040 2fcea7c1f978f2cffdbd14b4881009b3 619 Gene3D G3DSA:1.10.4030.30 242 374 8.8E-35 T 13-10-2018 VEA_004040 2fcea7c1f978f2cffdbd14b4881009b3 619 Pfam PF13616 PPIC-type PPIASE domain 263 361 6.5E-25 T 13-10-2018 VEA_004040 2fcea7c1f978f2cffdbd14b4881009b3 619 Gene3D G3DSA:1.10.4030.30 42 174 6.8E-15 T 13-10-2018 VEA_004040 2fcea7c1f978f2cffdbd14b4881009b3 619 SUPERFAMILY SSF54534 225 361 2.29E-31 T 13-10-2018 VEA_004040 2fcea7c1f978f2cffdbd14b4881009b3 619 SUPERFAMILY SSF109998 39 244 4.71E-38 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily VEA_004040 2fcea7c1f978f2cffdbd14b4881009b3 619 Gene3D G3DSA:3.10.50.40 269 363 8.8E-35 T 13-10-2018 VEA_000095 bbedcc853d215da94158de71032a50a8 774 Pfam PF01568 Molydopterin dinucleotide binding domain 649 736 1.9E-7 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VEA_000095 bbedcc853d215da94158de71032a50a8 774 PIRSF PIRSF000144 1 767 0.0 T 13-10-2018 VEA_000095 bbedcc853d215da94158de71032a50a8 774 Pfam PF00384 Molybdopterin oxidoreductase 110 493 1.4E-24 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEA_000095 bbedcc853d215da94158de71032a50a8 774 Gene3D G3DSA:3.40.228.10 182 404 3.0E-67 T 13-10-2018 VEA_000095 bbedcc853d215da94158de71032a50a8 774 SUPERFAMILY SSF53706 48 631 1.3E-148 T 13-10-2018 VEA_000095 bbedcc853d215da94158de71032a50a8 774 SUPERFAMILY SSF50692 645 764 2.71E-16 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VEA_000095 bbedcc853d215da94158de71032a50a8 774 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 14 762 3.2E-291 T 13-10-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 VEA_000095 bbedcc853d215da94158de71032a50a8 774 Gene3D G3DSA:3.40.50.740 121 499 3.0E-67 T 13-10-2018 VEA_002326 8fdbf033f914d95351503eb87435c933 582 Gene3D G3DSA:2.60.40.3470 27 145 2.3E-14 T 13-10-2018 VEA_002326 8fdbf033f914d95351503eb87435c933 582 Gene3D G3DSA:3.55.50.30 155 230 1.7E-9 T 13-10-2018 VEA_002326 8fdbf033f914d95351503eb87435c933 582 PRINTS PR00811 Bacterial general secretion pathway protein D signature 453 463 7.8E-20 T 13-10-2018 IPR001775 GspD/PilQ family VEA_002326 8fdbf033f914d95351503eb87435c933 582 PRINTS PR00811 Bacterial general secretion pathway protein D signature 545 563 7.8E-20 T 13-10-2018 IPR001775 GspD/PilQ family VEA_002326 8fdbf033f914d95351503eb87435c933 582 PRINTS PR00811 Bacterial general secretion pathway protein D signature 418 442 7.8E-20 T 13-10-2018 IPR001775 GspD/PilQ family VEA_002326 8fdbf033f914d95351503eb87435c933 582 PRINTS PR00811 Bacterial general secretion pathway protein D signature 321 331 7.8E-20 T 13-10-2018 IPR001775 GspD/PilQ family VEA_002326 8fdbf033f914d95351503eb87435c933 582 PRINTS PR00811 Bacterial general secretion pathway protein D signature 568 582 7.8E-20 T 13-10-2018 IPR001775 GspD/PilQ family VEA_002326 8fdbf033f914d95351503eb87435c933 582 SMART SM00965 182 230 7.6E-9 T 13-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 VEA_002326 8fdbf033f914d95351503eb87435c933 582 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 526 559 - T 13-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 VEA_002326 8fdbf033f914d95351503eb87435c933 582 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 157 580 1.7E-163 T 13-10-2018 IPR013355 Type IV pilus secretin PilQ VEA_002326 8fdbf033f914d95351503eb87435c933 582 Gene3D G3DSA:3.30.1370.120 231 323 1.0E-24 T 13-10-2018 IPR038591 NolW-like superfamily VEA_002326 8fdbf033f914d95351503eb87435c933 582 Pfam PF00263 Bacterial type II and III secretion system protein 422 580 3.1E-46 T 13-10-2018 IPR004846 Type II/III secretion system GO:0009306 VEA_002326 8fdbf033f914d95351503eb87435c933 582 Pfam PF03958 Bacterial type II/III secretion system short domain 256 321 1.2E-12 T 13-10-2018 IPR005644 NolW-like VEA_000557 7b76fbb179c3f08824d558618dfa623b 230 SMART SM00862 151 227 2.2E-13 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEA_000557 7b76fbb179c3f08824d558618dfa623b 230 Gene3D G3DSA:1.10.10.10 131 230 1.8E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000557 7b76fbb179c3f08824d558618dfa623b 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 227 2.6E-15 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEA_000557 7b76fbb179c3f08824d558618dfa623b 230 SMART SM00448 4 114 9.0E-37 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_000557 7b76fbb179c3f08824d558618dfa623b 230 SUPERFAMILY SSF46894 137 228 6.52E-19 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEA_000557 7b76fbb179c3f08824d558618dfa623b 230 SUPERFAMILY SSF52172 4 131 2.13E-38 T 13-10-2018 IPR011006 CheY-like superfamily VEA_000557 7b76fbb179c3f08824d558618dfa623b 230 Gene3D G3DSA:3.40.50.2300 2 130 4.4E-35 T 13-10-2018 VEA_000557 7b76fbb179c3f08824d558618dfa623b 230 Pfam PF00072 Response regulator receiver domain 6 114 9.5E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_000850 08e5ec50cc9a3af504f1681c6938294d 457 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 297 1.3E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_000850 08e5ec50cc9a3af504f1681c6938294d 457 Gene3D G3DSA:3.30.450.170 39 150 1.1E-8 T 13-10-2018 IPR038428 2-component histidine kinase, sensor domain superfamily VEA_000850 08e5ec50cc9a3af504f1681c6938294d 457 Gene3D G3DSA:1.10.287.130 182 299 1.8E-25 T 13-10-2018 VEA_000850 08e5ec50cc9a3af504f1681c6938294d 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 412 1.9E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_000850 08e5ec50cc9a3af504f1681c6938294d 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 398 1.9E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_000850 08e5ec50cc9a3af504f1681c6938294d 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 1.9E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_000850 08e5ec50cc9a3af504f1681c6938294d 457 SMART SM00387 343 457 2.9E-25 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_000850 08e5ec50cc9a3af504f1681c6938294d 457 Gene3D G3DSA:3.30.565.10 315 457 7.5E-30 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_000850 08e5ec50cc9a3af504f1681c6938294d 457 SUPERFAMILY SSF158472 178 230 3.01E-6 T 13-10-2018 VEA_000850 08e5ec50cc9a3af504f1681c6938294d 457 SUPERFAMILY SSF47384 217 298 1.69E-13 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEA_000850 08e5ec50cc9a3af504f1681c6938294d 457 SMART SM00304 178 233 1.0E-6 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_000850 08e5ec50cc9a3af504f1681c6938294d 457 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 347 456 5.5E-22 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_000850 08e5ec50cc9a3af504f1681c6938294d 457 SUPERFAMILY SSF55874 287 456 1.96E-32 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_000850 08e5ec50cc9a3af504f1681c6938294d 457 SMART SM00388 234 298 6.5E-13 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_000850 08e5ec50cc9a3af504f1681c6938294d 457 Pfam PF00672 HAMP domain 178 229 9.5E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_000850 08e5ec50cc9a3af504f1681c6938294d 457 Pfam PF16750 Sensor domain of 2-component histidine kinase 49 149 2.4E-29 T 13-10-2018 IPR031930 2-component histidine kinase, sensor domain VEA_000329 b354ece51017a305663b73701354c88d 251 SMART SM00382 26 213 6.7E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_000329 b354ece51017a305663b73701354c88d 251 Gene3D G3DSA:3.40.50.300 1 249 8.6E-62 T 13-10-2018 VEA_000329 b354ece51017a305663b73701354c88d 251 SUPERFAMILY SSF52540 2 227 1.08E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000329 b354ece51017a305663b73701354c88d 251 Pfam PF00005 ABC transporter 18 164 1.5E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_000329 b354ece51017a305663b73701354c88d 251 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_002777 93d296e7d9af753f7ae2cd75c2d5bdfb 814 Pfam PF09317 Domain of unknown function (DUF1974) 515 796 2.2E-114 T 13-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 VEA_002777 93d296e7d9af753f7ae2cd75c2d5bdfb 814 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 147 234 6.9E-16 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 VEA_002777 93d296e7d9af753f7ae2cd75c2d5bdfb 814 SUPERFAMILY SSF47203 361 508 6.93E-23 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 VEA_002777 93d296e7d9af753f7ae2cd75c2d5bdfb 814 SUPERFAMILY SSF56645 121 356 8.77E-43 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 VEA_002777 93d296e7d9af753f7ae2cd75c2d5bdfb 814 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 361 508 3.4E-13 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VEA_002777 93d296e7d9af753f7ae2cd75c2d5bdfb 814 Gene3D G3DSA:1.10.540.10 123 236 6.6E-99 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 VEA_002777 93d296e7d9af753f7ae2cd75c2d5bdfb 814 Gene3D G3DSA:1.20.140.10 361 508 6.6E-99 T 13-10-2018 VEA_002777 93d296e7d9af753f7ae2cd75c2d5bdfb 814 Gene3D G3DSA:2.40.110.10 237 360 6.6E-99 T 13-10-2018 VEA_001605 a69e43202566fc0efb27a70ea9890c7f 305 SUPERFAMILY SSF53474 79 302 8.76E-42 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_001605 a69e43202566fc0efb27a70ea9890c7f 305 Pfam PF01738 Dienelactone hydrolase family 93 301 4.0E-46 T 13-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 VEA_001605 a69e43202566fc0efb27a70ea9890c7f 305 Gene3D G3DSA:3.40.50.1820 65 302 2.2E-58 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_000376 bdb1696f7b8901fbe06871e42f49c1a3 128 SUPERFAMILY SSF46955 4 117 2.97E-26 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily VEA_000376 bdb1696f7b8901fbe06871e42f49c1a3 128 Gene3D G3DSA:1.10.1660.10 1 123 9.9E-28 T 13-10-2018 VEA_000376 bdb1696f7b8901fbe06871e42f49c1a3 128 Pfam PF09278 MerR, DNA binding 47 110 6.0E-17 T 13-10-2018 IPR015358 Transcription regulator MerR, DNA binding VEA_000376 bdb1696f7b8901fbe06871e42f49c1a3 128 Pfam PF00376 MerR family regulatory protein 5 40 7.1E-11 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEA_000376 bdb1696f7b8901fbe06871e42f49c1a3 128 SMART SM00422 4 71 1.5E-21 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEA_003658 bdc005bb3e420d491d31f35b774295ec 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 72 265 5.0E-39 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_003658 bdc005bb3e420d491d31f35b774295ec 266 Gene3D G3DSA:1.10.3720.10 44 260 8.4E-20 T 13-10-2018 IPR035906 MetI-like superfamily VEA_003658 bdc005bb3e420d491d31f35b774295ec 266 SUPERFAMILY SSF161098 51 250 5.89E-18 T 13-10-2018 IPR035906 MetI-like superfamily VEA_001644 2164c1aaeb4cf4cefdfdceccdc1f4a49 253 SUPERFAMILY SSF100950 78 234 2.34E-31 T 13-10-2018 IPR037171 NagB/RpiA transferase-like VEA_001644 2164c1aaeb4cf4cefdfdceccdc1f4a49 253 SMART SM00420 9 61 8.1E-13 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEA_001644 2164c1aaeb4cf4cefdfdceccdc1f4a49 253 SUPERFAMILY SSF46785 4 67 9.36E-13 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_001644 2164c1aaeb4cf4cefdfdceccdc1f4a49 253 Pfam PF08220 DeoR-like helix-turn-helix domain 9 62 9.2E-15 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEA_001644 2164c1aaeb4cf4cefdfdceccdc1f4a49 253 SMART SM01134 73 234 7.8E-58 T 13-10-2018 VEA_001644 2164c1aaeb4cf4cefdfdceccdc1f4a49 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 13-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VEA_001644 2164c1aaeb4cf4cefdfdceccdc1f4a49 253 Gene3D G3DSA:1.10.10.10 1 56 3.5E-5 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001644 2164c1aaeb4cf4cefdfdceccdc1f4a49 253 Pfam PF00455 DeoR C terminal sensor domain 77 232 3.5E-45 T 13-10-2018 IPR014036 DeoR C-terminal sensor domain VEA_001644 2164c1aaeb4cf4cefdfdceccdc1f4a49 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 2.3E-6 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEA_001644 2164c1aaeb4cf4cefdfdceccdc1f4a49 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 2.3E-6 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VEA_002960 305e04c86c6cb29c79abcda61d4bdff6 291 Gene3D G3DSA:1.10.3720.10 69 286 3.4E-22 T 13-10-2018 IPR035906 MetI-like superfamily VEA_002960 305e04c86c6cb29c79abcda61d4bdff6 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 291 3.0E-41 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_002960 305e04c86c6cb29c79abcda61d4bdff6 291 SUPERFAMILY SSF161098 73 276 1.42E-20 T 13-10-2018 IPR035906 MetI-like superfamily VEA_004339 2c00d943b2c71f239a0c1beef086eb84 398 Gene3D G3DSA:1.10.150.130 102 194 2.0E-15 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal VEA_004339 2c00d943b2c71f239a0c1beef086eb84 398 Gene3D G3DSA:3.30.160.390 1 101 1.1E-25 T 13-10-2018 IPR038488 Integrase, DNA-binding domain superfamily VEA_004339 2c00d943b2c71f239a0c1beef086eb84 398 SUPERFAMILY SSF56349 98 383 8.24E-61 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VEA_004339 2c00d943b2c71f239a0c1beef086eb84 398 Pfam PF00589 Phage integrase family 203 373 6.2E-23 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VEA_004339 2c00d943b2c71f239a0c1beef086eb84 398 Pfam PF13356 Arm DNA-binding domain 2 88 2.9E-16 T 13-10-2018 IPR025166 Integrase, DNA-binding domain VEA_004339 2c00d943b2c71f239a0c1beef086eb84 398 Gene3D G3DSA:1.10.443.10 200 386 3.1E-20 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VEA_001360 fd2f140996ab5369bd9d0e6f54585a03 304 Gene3D G3DSA:2.40.50.180 31 146 3.3E-24 T 13-10-2018 VEA_001360 fd2f140996ab5369bd9d0e6f54585a03 304 PIRSF PIRSF002867 1 298 1.1E-87 T 13-10-2018 IPR024181 Chemotaxis response regulator CheV VEA_001360 fd2f140996ab5369bd9d0e6f54585a03 304 SUPERFAMILY SSF50341 10 152 1.7E-29 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VEA_001360 fd2f140996ab5369bd9d0e6f54585a03 304 Gene3D G3DSA:2.30.30.40 17 141 3.3E-24 T 13-10-2018 VEA_001360 fd2f140996ab5369bd9d0e6f54585a03 304 Gene3D G3DSA:3.40.50.2300 162 299 6.3E-22 T 13-10-2018 VEA_001360 fd2f140996ab5369bd9d0e6f54585a03 304 Pfam PF00072 Response regulator receiver domain 175 289 4.3E-14 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_001360 fd2f140996ab5369bd9d0e6f54585a03 304 Pfam PF01584 CheW-like domain 14 149 7.9E-30 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VEA_001360 fd2f140996ab5369bd9d0e6f54585a03 304 SMART SM00448 173 290 1.1E-14 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_001360 fd2f140996ab5369bd9d0e6f54585a03 304 SMART SM00260 11 147 1.1E-19 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VEA_001360 fd2f140996ab5369bd9d0e6f54585a03 304 SUPERFAMILY SSF52172 173 294 4.84E-21 T 13-10-2018 IPR011006 CheY-like superfamily VEA_000183 3f78b2a9587c86efeeafec5c4823d73e 414 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 14 413 6.3E-131 T 13-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VEA_000183 3f78b2a9587c86efeeafec5c4823d73e 414 SUPERFAMILY SSF56935 22 413 6.41E-96 T 13-10-2018 VEA_000183 3f78b2a9587c86efeeafec5c4823d73e 414 Gene3D G3DSA:2.40.160.60 22 414 3.4E-126 T 13-10-2018 VEA_000221 4b20e36a082db2f7165bbb85b66b20f6 326 Gene3D G3DSA:3.40.50.2300 62 154 1.1E-20 T 13-10-2018 VEA_000221 4b20e36a082db2f7165bbb85b66b20f6 326 Gene3D G3DSA:1.10.260.40 1 61 8.8E-27 T 13-10-2018 VEA_000221 4b20e36a082db2f7165bbb85b66b20f6 326 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 63 248 2.3E-13 T 13-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain VEA_000221 4b20e36a082db2f7165bbb85b66b20f6 326 SUPERFAMILY SSF53822 61 313 1.96E-40 T 13-10-2018 IPR028082 Periplasmic binding protein-like I VEA_000221 4b20e36a082db2f7165bbb85b66b20f6 326 Gene3D G3DSA:3.40.50.2300 155 326 7.8E-27 T 13-10-2018 VEA_000221 4b20e36a082db2f7165bbb85b66b20f6 326 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 13-10-2018 VEA_000221 4b20e36a082db2f7165bbb85b66b20f6 326 SMART SM00354 1 73 6.1E-27 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEA_000221 4b20e36a082db2f7165bbb85b66b20f6 326 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 326 3.2E-151 T 13-10-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 VEA_000221 4b20e36a082db2f7165bbb85b66b20f6 326 SUPERFAMILY SSF47413 1 58 1.05E-15 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEA_000221 4b20e36a082db2f7165bbb85b66b20f6 326 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 50 4.5E-18 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEA_003778 fccdc5d98527acf43359e5bd14c3dd34 660 SUPERFAMILY SSF56935 268 454 1.13E-5 T 13-10-2018 VEA_003778 fccdc5d98527acf43359e5bd14c3dd34 660 TIGRFAM TIGR03509 OMP_MtrB_PioB: decaheme-associated outer membrane protein, MtrB/PioB family 49 660 7.2E-204 T 13-10-2018 IPR020016 Decahaem-associated outer membrane protein, MtrB/PioB VEA_003778 fccdc5d98527acf43359e5bd14c3dd34 660 SUPERFAMILY SSF56935 427 634 8.7E-9 T 13-10-2018 VEA_003778 fccdc5d98527acf43359e5bd14c3dd34 660 Pfam PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB 58 660 2.5E-162 T 13-10-2018 IPR020016 Decahaem-associated outer membrane protein, MtrB/PioB VEA_004500 3dacc1e908acebd7496aa9cefeee0338 287 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 284 2.7E-102 T 13-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 VEA_004500 3dacc1e908acebd7496aa9cefeee0338 287 SUPERFAMILY SSF53790 12 232 6.28E-86 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 VEA_004500 3dacc1e908acebd7496aa9cefeee0338 287 Gene3D G3DSA:3.40.1010.10 2 120 6.5E-48 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 VEA_004500 3dacc1e908acebd7496aa9cefeee0338 287 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 13-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 VEA_004500 3dacc1e908acebd7496aa9cefeee0338 287 PIRSF PIRSF005917 1 286 1.5E-108 T 13-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 VEA_004500 3dacc1e908acebd7496aa9cefeee0338 287 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.536 T 13-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 VEA_004500 3dacc1e908acebd7496aa9cefeee0338 287 Gene3D G3DSA:3.30.950.10 121 241 1.7E-44 T 13-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 VEA_004500 3dacc1e908acebd7496aa9cefeee0338 287 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 213 9.0E-30 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 VEA_003388 69d8fd4317984f62f9ee1a5a71a9e580 298 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 6 295 7.2E-127 T 13-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 VEA_003388 69d8fd4317984f62f9ee1a5a71a9e580 298 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 3 296 49.589 T 13-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 VEA_003388 69d8fd4317984f62f9ee1a5a71a9e580 298 Pfam PF13714 Phosphoenolpyruvate phosphomutase 14 259 7.5E-46 T 13-10-2018 VEA_003388 69d8fd4317984f62f9ee1a5a71a9e580 298 SUPERFAMILY SSF51621 5 294 4.93E-95 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VEA_003388 69d8fd4317984f62f9ee1a5a71a9e580 298 Gene3D G3DSA:3.20.20.60 2 298 1.1E-97 T 13-10-2018 VEA_003388 69d8fd4317984f62f9ee1a5a71a9e580 298 ProSitePatterns PS00161 Isocitrate lyase signature. 119 124 - T 13-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 VEA_000739 a59c667e24731e3df95631483201f0f6 131 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 83 127 2.3E-9 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VEA_000739 a59c667e24731e3df95631483201f0f6 131 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 1 129 9.1E-37 T 13-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 VEA_000742 0b82785020a22e8cbb262bf6ace8080f 93 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 90 3.9E-15 T 13-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 VEA_000742 0b82785020a22e8cbb262bf6ace8080f 93 Pfam PF04316 Anti-sigma-28 factor, FlgM 43 86 1.9E-6 T 13-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal VEA_000742 0b82785020a22e8cbb262bf6ace8080f 93 SUPERFAMILY SSF101498 12 89 7.45E-9 T 13-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily VEA_003636 8c1a6054260c33bf395769e69c71ff4f 719 Gene3D G3DSA:3.30.70.270 273 454 1.8E-44 T 13-10-2018 VEA_003636 8c1a6054260c33bf395769e69c71ff4f 719 SUPERFAMILY SSF55073 281 443 2.67E-33 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_003636 8c1a6054260c33bf395769e69c71ff4f 719 Gene3D G3DSA:3.20.20.450 455 717 7.8E-93 T 13-10-2018 IPR035919 EAL domain superfamily VEA_003636 8c1a6054260c33bf395769e69c71ff4f 719 Gene3D G3DSA:1.20.1480.50 179 272 2.0E-5 T 13-10-2018 VEA_003636 8c1a6054260c33bf395769e69c71ff4f 719 Pfam PF00563 EAL domain 458 694 1.1E-73 T 13-10-2018 IPR001633 EAL domain VEA_003636 8c1a6054260c33bf395769e69c71ff4f 719 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 273 440 4.5E-30 T 13-10-2018 IPR000160 GGDEF domain VEA_003636 8c1a6054260c33bf395769e69c71ff4f 719 Pfam PF00990 Diguanylate cyclase, GGDEF domain 276 436 3.7E-32 T 13-10-2018 IPR000160 GGDEF domain VEA_003636 8c1a6054260c33bf395769e69c71ff4f 719 SMART SM00052 452 699 3.3E-110 T 13-10-2018 IPR001633 EAL domain VEA_003636 8c1a6054260c33bf395769e69c71ff4f 719 SMART SM00267 265 442 2.7E-31 T 13-10-2018 IPR000160 GGDEF domain VEA_003636 8c1a6054260c33bf395769e69c71ff4f 719 SUPERFAMILY SSF141868 462 708 5.75E-84 T 13-10-2018 IPR035919 EAL domain superfamily VEA_000339 25653b393846c3528fe9f8c963bfffc3 292 Gene3D G3DSA:3.40.50.2300 125 259 2.4E-98 T 13-10-2018 VEA_000339 25653b393846c3528fe9f8c963bfffc3 292 SUPERFAMILY SSF53822 6 292 1.14E-87 T 13-10-2018 IPR028082 Periplasmic binding protein-like I VEA_000339 25653b393846c3528fe9f8c963bfffc3 292 Gene3D G3DSA:3.40.50.2300 29 278 2.4E-98 T 13-10-2018 VEA_000339 25653b393846c3528fe9f8c963bfffc3 292 Pfam PF13407 Periplasmic binding protein domain 28 278 2.0E-60 T 13-10-2018 IPR025997 Periplasmic binding protein VEA_003542 f42be29a5d0fd5a56cb06038f58f1766 395 SUPERFAMILY SSF53448 48 325 2.25E-34 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEA_003542 f42be29a5d0fd5a56cb06038f58f1766 395 Gene3D G3DSA:3.90.550.10 47 262 5.8E-23 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEA_003542 f42be29a5d0fd5a56cb06038f58f1766 395 Pfam PF13641 Glycosyltransferase like family 2 57 277 1.9E-18 T 13-10-2018 VEA_000158 870def2218bf46c28d14d7645948f042 693 SUPERFAMILY SSF56935 19 693 5.95E-119 T 13-10-2018 VEA_000158 870def2218bf46c28d14d7645948f042 693 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 28 693 1.3E-157 T 13-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 VEA_000158 870def2218bf46c28d14d7645948f042 693 Pfam PF00593 TonB dependent receptor 177 691 1.3E-64 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VEA_000158 870def2218bf46c28d14d7645948f042 693 Gene3D G3DSA:2.170.130.10 38 165 3.4E-34 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VEA_000158 870def2218bf46c28d14d7645948f042 693 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 28 693 3.1E-143 T 13-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 VEA_000158 870def2218bf46c28d14d7645948f042 693 Gene3D G3DSA:2.40.170.20 166 693 1.6E-116 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VEA_000158 870def2218bf46c28d14d7645948f042 693 Pfam PF07715 TonB-dependent Receptor Plug Domain 42 151 5.7E-24 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain VEA_002321 126ffd85bd5fbc75ca92a36998272f1b 825 Pfam PF00912 Transglycosylase 27 201 3.0E-63 T 13-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEA_002321 126ffd85bd5fbc75ca92a36998272f1b 825 Pfam PF00905 Penicillin binding protein transpeptidase domain 410 582 3.0E-22 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VEA_002321 126ffd85bd5fbc75ca92a36998272f1b 825 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 37 758 1.7E-169 T 13-10-2018 VEA_002321 126ffd85bd5fbc75ca92a36998272f1b 825 Gene3D G3DSA:1.10.3810.10 20 214 1.2E-78 T 13-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEA_002321 126ffd85bd5fbc75ca92a36998272f1b 825 SUPERFAMILY SSF53955 15 228 2.28E-78 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily VEA_002321 126ffd85bd5fbc75ca92a36998272f1b 825 Gene3D G3DSA:3.40.710.10 215 302 8.2E-9 T 13-10-2018 VEA_002321 126ffd85bd5fbc75ca92a36998272f1b 825 SUPERFAMILY SSF56601 183 807 6.16E-112 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VEA_002321 126ffd85bd5fbc75ca92a36998272f1b 825 Pfam PF17092 Penicillin-binding protein OB-like domain 289 406 5.8E-33 T 13-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEA_003038 3ddfcedef1f827ae728686c9ed290c56 703 Pfam PF11412 Disulphide bond corrector protein DsbC 58 164 3.2E-16 T 13-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain VEA_003038 3ddfcedef1f827ae728686c9ed290c56 703 ProSitePatterns PS00194 Thioredoxin family active site. 606 624 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VEA_003038 3ddfcedef1f827ae728686c9ed290c56 703 Gene3D G3DSA:3.40.30.10 584 689 1.2E-8 T 13-10-2018 VEA_003038 3ddfcedef1f827ae728686c9ed290c56 703 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 308 515 7.9E-15 T 13-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 VEA_003038 3ddfcedef1f827ae728686c9ed290c56 703 Pfam PF13899 Thioredoxin-like 587 673 2.1E-11 T 13-10-2018 VEA_003038 3ddfcedef1f827ae728686c9ed290c56 703 SUPERFAMILY SSF52833 579 673 1.89E-12 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VEA_002613 b258eaadd12c55635dd832967816fa02 711 SMART SM00322 553 618 1.1E-10 T 13-10-2018 IPR004087 K Homology domain GO:0003676 VEA_002613 b258eaadd12c55635dd832967816fa02 711 Pfam PF03725 3' exoribonuclease family, domain 2 148 211 1.6E-12 T 13-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VEA_002613 b258eaadd12c55635dd832967816fa02 711 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 4 694 30.148 T 13-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VEA_002613 b258eaadd12c55635dd832967816fa02 711 Gene3D G3DSA:2.40.50.140 623 694 2.1E-29 T 13-10-2018 VEA_002613 b258eaadd12c55635dd832967816fa02 711 Pfam PF00013 KH domain 557 615 3.9E-8 T 13-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 VEA_002613 b258eaadd12c55635dd832967816fa02 711 Gene3D G3DSA:3.30.230.70 234 550 8.0E-115 T 13-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VEA_002613 b258eaadd12c55635dd832967816fa02 711 Gene3D G3DSA:3.30.1370.10 551 622 2.0E-18 T 13-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 VEA_002613 b258eaadd12c55635dd832967816fa02 711 SMART SM00316 621 691 4.5E-25 T 13-10-2018 IPR022967 RNA-binding domain, S1 VEA_002613 b258eaadd12c55635dd832967816fa02 711 SUPERFAMILY SSF50249 621 704 2.68E-22 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_002613 b258eaadd12c55635dd832967816fa02 711 PIRSF PIRSF005499 2 711 5.3E-297 T 13-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VEA_002613 b258eaadd12c55635dd832967816fa02 711 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 3.6E-20 T 13-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VEA_002613 b258eaadd12c55635dd832967816fa02 711 Pfam PF01138 3' exoribonuclease family, domain 1 17 145 5.3E-19 T 13-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VEA_002613 b258eaadd12c55635dd832967816fa02 711 SUPERFAMILY SSF54211 299 493 1.52E-46 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEA_002613 b258eaadd12c55635dd832967816fa02 711 SUPERFAMILY SSF55666 146 236 2.1E-28 T 13-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VEA_002613 b258eaadd12c55635dd832967816fa02 711 SUPERFAMILY SSF54211 5 145 1.47E-48 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEA_002613 b258eaadd12c55635dd832967816fa02 711 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 11 692 0.0 T 13-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VEA_002613 b258eaadd12c55635dd832967816fa02 711 SUPERFAMILY SSF55666 451 550 9.68E-28 T 13-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VEA_002613 b258eaadd12c55635dd832967816fa02 711 SUPERFAMILY SSF46915 240 321 1.23E-19 T 13-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VEA_002613 b258eaadd12c55635dd832967816fa02 711 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 321 1.4E-24 T 13-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VEA_002613 b258eaadd12c55635dd832967816fa02 711 Gene3D G3DSA:3.30.230.70 2 229 1.1E-76 T 13-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VEA_002613 b258eaadd12c55635dd832967816fa02 711 SUPERFAMILY SSF54791 555 640 5.48E-22 T 13-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 VEA_002613 b258eaadd12c55635dd832967816fa02 711 Pfam PF00575 S1 RNA binding domain 620 691 3.9E-18 T 13-10-2018 IPR003029 S1 domain GO:0003676 VEA_002944 75c6fa6a7459eb99c08bb574b3fed127 230 PIRSF PIRSF006102 1 220 4.1E-78 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VEA_002944 75c6fa6a7459eb99c08bb574b3fed127 230 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 7 208 8.7E-88 T 13-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 VEA_002944 75c6fa6a7459eb99c08bb574b3fed127 230 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 210 27.969 T 13-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 VEA_002944 75c6fa6a7459eb99c08bb574b3fed127 230 Pfam PF02508 Rnf-Nqr subunit, membrane protein 7 200 6.5E-65 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VEA_000458 2f488eff378328616788ddb8111ab44e 330 SUPERFAMILY SSF53850 113 318 1.71E-44 T 13-10-2018 VEA_000458 2f488eff378328616788ddb8111ab44e 330 SUPERFAMILY SSF46785 22 133 6.13E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000458 2f488eff378328616788ddb8111ab44e 330 Gene3D G3DSA:1.10.10.10 24 110 8.1E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000458 2f488eff378328616788ddb8111ab44e 330 Gene3D G3DSA:3.40.190.290 113 315 3.6E-60 T 13-10-2018 VEA_000458 2f488eff378328616788ddb8111ab44e 330 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 26 83 1.3E-20 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000458 2f488eff378328616788ddb8111ab44e 330 Pfam PF03466 LysR substrate binding domain 111 313 2.2E-41 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_002694 65608a59526061954011747f8591af99 403 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 216 235 - T 13-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VEA_002694 65608a59526061954011747f8591af99 403 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 2 403 8.8E-158 T 13-10-2018 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 VEA_002694 65608a59526061954011747f8591af99 403 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 6 401 6.6E-167 T 13-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 VEA_002694 65608a59526061954011747f8591af99 403 SUPERFAMILY SSF53383 2 400 1.88E-123 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_002694 65608a59526061954011747f8591af99 403 Pfam PF00266 Aminotransferase class-V 24 392 8.0E-149 T 13-10-2018 IPR000192 Aminotransferase class V domain VEA_002694 65608a59526061954011747f8591af99 403 Gene3D G3DSA:3.40.640.10 35 295 1.1E-162 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_002694 65608a59526061954011747f8591af99 403 Gene3D G3DSA:3.90.1150.10 7 395 1.1E-162 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEA_002694 65608a59526061954011747f8591af99 403 PIRSF PIRSF005572 21 403 7.1E-51 T 13-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 VEA_001776 3fff7f1687dec2aff9ea3c7d77577f71 283 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 47.129 T 13-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VEA_001776 3fff7f1687dec2aff9ea3c7d77577f71 283 SUPERFAMILY SSF51569 3 278 1.92E-100 T 13-10-2018 VEA_001776 3fff7f1687dec2aff9ea3c7d77577f71 283 Pfam PF00793 DAHP synthetase I family 11 275 2.2E-66 T 13-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VEA_001776 3fff7f1687dec2aff9ea3c7d77577f71 283 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 1.4E-113 T 13-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VEA_001776 3fff7f1687dec2aff9ea3c7d77577f71 283 Gene3D G3DSA:3.20.20.70 1 283 9.8E-98 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_001984 26104c9bdcc2a52a33130a4d7116b7e0 296 Pfam PF03466 LysR substrate binding domain 87 289 3.6E-32 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_001984 26104c9bdcc2a52a33130a4d7116b7e0 296 SUPERFAMILY SSF53850 87 290 1.03E-27 T 13-10-2018 VEA_001984 26104c9bdcc2a52a33130a4d7116b7e0 296 Gene3D G3DSA:1.10.10.10 1 90 6.0E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001984 26104c9bdcc2a52a33130a4d7116b7e0 296 SUPERFAMILY SSF46785 1 87 5.89E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_001984 26104c9bdcc2a52a33130a4d7116b7e0 296 Gene3D G3DSA:3.40.190.10 165 265 3.5E-26 T 13-10-2018 VEA_001984 26104c9bdcc2a52a33130a4d7116b7e0 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 3.5E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_001984 26104c9bdcc2a52a33130a4d7116b7e0 296 Gene3D G3DSA:3.40.190.10 91 287 3.5E-26 T 13-10-2018 VEA_001372 8940e4d3e0af5290b49113ff168171e1 808 Gene3D G3DSA:2.60.120.380 710 807 5.1E-8 T 13-10-2018 VEA_001372 8940e4d3e0af5290b49113ff168171e1 808 Gene3D G3DSA:2.60.120.380 588 689 1.4E-12 T 13-10-2018 VEA_001372 8940e4d3e0af5290b49113ff168171e1 808 Gene3D G3DSA:1.10.1740.190 303 450 1.1E-33 T 13-10-2018 VEA_001372 8940e4d3e0af5290b49113ff168171e1 808 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 605 675 7.5E-9 T 13-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial VEA_001372 8940e4d3e0af5290b49113ff168171e1 808 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 97 115 8.3E-32 T 13-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 VEA_001372 8940e4d3e0af5290b49113ff168171e1 808 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 374 388 8.3E-32 T 13-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 VEA_001372 8940e4d3e0af5290b49113ff168171e1 808 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 458 473 8.3E-32 T 13-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 VEA_001372 8940e4d3e0af5290b49113ff168171e1 808 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 392 408 8.3E-32 T 13-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 VEA_001372 8940e4d3e0af5290b49113ff168171e1 808 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 434 452 8.3E-32 T 13-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 VEA_001372 8940e4d3e0af5290b49113ff168171e1 808 Pfam PF01752 Collagenase 274 558 2.9E-113 T 13-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 VEA_001372 8940e4d3e0af5290b49113ff168171e1 808 Pfam PF08453 Peptidase family M9 N-terminal 31 212 7.8E-55 T 13-10-2018 IPR013661 Peptidase M9, collagenase, N-terminal domain VEA_002553 6c1064c949491983854a695bc4d22831 183 SUPERFAMILY SSF48498 68 176 3.2E-10 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VEA_002553 6c1064c949491983854a695bc4d22831 183 SUPERFAMILY SSF46689 2 63 9.75E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_002553 6c1064c949491983854a695bc4d22831 183 Pfam PF00440 Bacterial regulatory proteins, tetR family 2 46 1.5E-12 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEA_002553 6c1064c949491983854a695bc4d22831 183 Gene3D G3DSA:1.10.357.10 1 183 1.6E-77 T 13-10-2018 VEA_003801 80d8fa91cf8c31f4666a7a09bff1c6f0 310 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 25 310 2.7E-175 T 13-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 VEA_003801 80d8fa91cf8c31f4666a7a09bff1c6f0 310 SUPERFAMILY SSF53335 9 287 6.75E-53 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_003801 80d8fa91cf8c31f4666a7a09bff1c6f0 310 Gene3D G3DSA:3.40.50.150 76 303 9.6E-47 T 13-10-2018 VEA_004429 488cc6ee1928b705164bda9066a01356 263 Pfam PF01925 Sulfite exporter TauE/SafE 9 261 1.7E-50 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VEA_003880 326bb5dbc8f43917cd6ffffb39abc121 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 6.2E-22 T 13-10-2018 VEA_003880 326bb5dbc8f43917cd6ffffb39abc121 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 9.1E-23 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEA_003880 326bb5dbc8f43917cd6ffffb39abc121 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 9.1E-23 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEA_003880 326bb5dbc8f43917cd6ffffb39abc121 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 9.1E-23 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEA_003880 326bb5dbc8f43917cd6ffffb39abc121 164 Gene3D G3DSA:1.10.10.10 1 63 5.8E-32 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_003880 326bb5dbc8f43917cd6ffffb39abc121 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 13-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VEA_003880 326bb5dbc8f43917cd6ffffb39abc121 164 SMART SM00344 12 121 3.2E-55 T 13-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VEA_003880 326bb5dbc8f43917cd6ffffb39abc121 164 SUPERFAMILY SSF54909 74 157 1.02E-21 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel VEA_003880 326bb5dbc8f43917cd6ffffb39abc121 164 Gene3D G3DSA:3.30.70.920 64 159 5.0E-24 T 13-10-2018 VEA_003880 326bb5dbc8f43917cd6ffffb39abc121 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 1.6E-23 T 13-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VEA_003880 326bb5dbc8f43917cd6ffffb39abc121 164 SUPERFAMILY SSF46785 12 70 2.33E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_002695 e32e90437bfa0ab961ad6a9a8a2ca529 199 Pfam PF01965 DJ-1/PfpI family 3 169 2.1E-39 T 13-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 VEA_002695 e32e90437bfa0ab961ad6a9a8a2ca529 199 Gene3D G3DSA:3.40.50.880 1 190 9.9E-50 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VEA_002695 e32e90437bfa0ab961ad6a9a8a2ca529 199 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 4 183 3.6E-63 T 13-10-2018 IPR006287 Protein/nucleic acid deglycase DJ-1 Reactome: R-HSA-3899300 VEA_002695 e32e90437bfa0ab961ad6a9a8a2ca529 199 SUPERFAMILY SSF52317 3 189 4.09E-44 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VEA_000744 2a082660c667202eb0476fdc0fecbbd2 248 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 93 121 - T 13-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VEA_000744 2a082660c667202eb0476fdc0fecbbd2 248 Pfam PF01464 Transglycosylase SLT domain 80 188 5.7E-29 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 VEA_000744 2a082660c667202eb0476fdc0fecbbd2 248 Gene3D G3DSA:1.10.530.10 72 217 6.3E-34 T 13-10-2018 VEA_000744 2a082660c667202eb0476fdc0fecbbd2 248 SUPERFAMILY SSF53955 72 207 2.05E-37 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily VEA_001268 641bee6e7e7dda0985a46cc4c9f44753 599 Pfam PF13519 von Willebrand factor type A domain 88 194 1.4E-11 T 13-10-2018 IPR002035 von Willebrand factor, type A VEA_001268 641bee6e7e7dda0985a46cc4c9f44753 599 Pfam PF07719 Tetratricopeptide repeat 400 429 6.8E-6 T 13-10-2018 IPR013105 Tetratricopeptide repeat 2 VEA_001268 641bee6e7e7dda0985a46cc4c9f44753 599 SUPERFAMILY SSF53300 87 267 1.18E-18 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VEA_001268 641bee6e7e7dda0985a46cc4c9f44753 599 Gene3D G3DSA:1.25.40.10 338 457 1.0E-10 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_001268 641bee6e7e7dda0985a46cc4c9f44753 599 SUPERFAMILY SSF48452 350 452 1.21E-13 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_001268 641bee6e7e7dda0985a46cc4c9f44753 599 Gene3D G3DSA:3.40.50.410 84 281 2.8E-31 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VEA_001268 641bee6e7e7dda0985a46cc4c9f44753 599 SMART SM00327 84 285 9.0E-5 T 13-10-2018 IPR002035 von Willebrand factor, type A VEA_001268 641bee6e7e7dda0985a46cc4c9f44753 599 SMART SM00028 397 430 0.0011 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_001977 114e924cf157fbf07aba00229a3beaef 137 Gene3D G3DSA:1.10.760.10 59 136 1.4E-33 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEA_001977 114e924cf157fbf07aba00229a3beaef 137 PRINTS PR00607 Class IE cytochrome C signature 123 134 2.6E-14 T 13-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VEA_001977 114e924cf157fbf07aba00229a3beaef 137 PRINTS PR00607 Class IE cytochrome C signature 80 90 2.6E-14 T 13-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VEA_001977 114e924cf157fbf07aba00229a3beaef 137 PRINTS PR00607 Class IE cytochrome C signature 69 80 2.6E-14 T 13-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VEA_001977 114e924cf157fbf07aba00229a3beaef 137 PRINTS PR00607 Class IE cytochrome C signature 108 120 2.6E-14 T 13-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VEA_001977 114e924cf157fbf07aba00229a3beaef 137 SUPERFAMILY SSF46626 60 134 1.01E-18 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEA_001977 114e924cf157fbf07aba00229a3beaef 137 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 59 133 1.2E-15 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_003695 0f9d238eae1da225ddbe76c25a11f731 457 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 1.8E-30 T 13-10-2018 VEA_003695 0f9d238eae1da225ddbe76c25a11f731 457 PRINTS PR00173 Glutamate-aspartate symporter signature 259 278 1.8E-30 T 13-10-2018 VEA_003695 0f9d238eae1da225ddbe76c25a11f731 457 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 1.8E-30 T 13-10-2018 VEA_003695 0f9d238eae1da225ddbe76c25a11f731 457 PRINTS PR00173 Glutamate-aspartate symporter signature 396 416 1.8E-30 T 13-10-2018 VEA_003695 0f9d238eae1da225ddbe76c25a11f731 457 PRINTS PR00173 Glutamate-aspartate symporter signature 181 203 1.8E-30 T 13-10-2018 VEA_003695 0f9d238eae1da225ddbe76c25a11f731 457 PRINTS PR00173 Glutamate-aspartate symporter signature 369 388 1.8E-30 T 13-10-2018 VEA_003695 0f9d238eae1da225ddbe76c25a11f731 457 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 1.8E-30 T 13-10-2018 VEA_003695 0f9d238eae1da225ddbe76c25a11f731 457 SUPERFAMILY SSF118215 29 441 1.31E-91 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VEA_003695 0f9d238eae1da225ddbe76c25a11f731 457 Gene3D G3DSA:1.10.3860.10 4 456 2.2E-97 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VEA_003695 0f9d238eae1da225ddbe76c25a11f731 457 Pfam PF00375 Sodium:dicarboxylate symporter family 32 441 1.5E-98 T 13-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 VEA_004378 0b48effb490aa5136d2a1bf75a7fc4be 272 SUPERFAMILY SSF52540 22 258 4.02E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_004378 0b48effb490aa5136d2a1bf75a7fc4be 272 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_004378 0b48effb490aa5136d2a1bf75a7fc4be 272 Pfam PF00005 ABC transporter 41 197 2.3E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_004378 0b48effb490aa5136d2a1bf75a7fc4be 272 SMART SM00382 50 252 9.2E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_004378 0b48effb490aa5136d2a1bf75a7fc4be 272 Gene3D G3DSA:3.40.50.300 21 269 7.8E-66 T 13-10-2018 VEA_004378 0b48effb490aa5136d2a1bf75a7fc4be 272 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 26 272 3.8E-124 T 13-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 VEA_002281 b36ac3853503ce2ec8fbc525d9758e4d 70 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 25.487 T 13-10-2018 IPR010648 Uncharacterised protein family UPF0270 VEA_002281 b36ac3853503ce2ec8fbc525d9758e4d 70 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 64 5.0E-24 T 13-10-2018 IPR010648 Uncharacterised protein family UPF0270 VEA_002281 b36ac3853503ce2ec8fbc525d9758e4d 70 PIRSF PIRSF006169 1 70 1.2E-35 T 13-10-2018 IPR010648 Uncharacterised protein family UPF0270 VEA_002281 b36ac3853503ce2ec8fbc525d9758e4d 70 Gene3D G3DSA:1.10.10.610 1 70 1.0E-29 T 13-10-2018 IPR036685 YehU-like superfamily VEA_002281 b36ac3853503ce2ec8fbc525d9758e4d 70 SUPERFAMILY SSF118001 1 69 1.96E-28 T 13-10-2018 IPR036685 YehU-like superfamily VEA_002281 b36ac3853503ce2ec8fbc525d9758e4d 70 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 68 3.5E-34 T 13-10-2018 IPR010648 Uncharacterised protein family UPF0270 VEA_004161 83d282358a0292b2696c58c52f1e68d6 377 SUPERFAMILY SSF64518 1 376 8.37E-97 T 13-10-2018 VEA_004161 83d282358a0292b2696c58c52f1e68d6 377 Gene3D G3DSA:3.30.70.2120 174 275 5.4E-77 T 13-10-2018 VEA_004161 83d282358a0292b2696c58c52f1e68d6 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 5.7E-26 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VEA_004161 83d282358a0292b2696c58c52f1e68d6 377 Gene3D G3DSA:1.20.1330.10 44 327 5.4E-77 T 13-10-2018 VEA_004161 83d282358a0292b2696c58c52f1e68d6 377 PRINTS PR00207 Flagellin signature 37 54 2.5E-27 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VEA_004161 83d282358a0292b2696c58c52f1e68d6 377 PRINTS PR00207 Flagellin signature 111 134 2.5E-27 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VEA_004161 83d282358a0292b2696c58c52f1e68d6 377 PRINTS PR00207 Flagellin signature 76 95 2.5E-27 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VEA_004161 83d282358a0292b2696c58c52f1e68d6 377 Pfam PF07196 Flagellin hook IN motif 194 249 1.1E-11 T 13-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VEA_004161 83d282358a0292b2696c58c52f1e68d6 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 5.3E-42 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VEA_004161 83d282358a0292b2696c58c52f1e68d6 377 Gene3D G3DSA:1.10.8.410 328 376 1.9E-20 T 13-10-2018 VEA_002805 83d282358a0292b2696c58c52f1e68d6 377 SUPERFAMILY SSF64518 1 376 8.37E-97 T 13-10-2018 VEA_002805 83d282358a0292b2696c58c52f1e68d6 377 Gene3D G3DSA:3.30.70.2120 174 275 5.4E-77 T 13-10-2018 VEA_002805 83d282358a0292b2696c58c52f1e68d6 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 5.7E-26 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VEA_002805 83d282358a0292b2696c58c52f1e68d6 377 Gene3D G3DSA:1.20.1330.10 44 327 5.4E-77 T 13-10-2018 VEA_002805 83d282358a0292b2696c58c52f1e68d6 377 PRINTS PR00207 Flagellin signature 37 54 2.5E-27 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VEA_002805 83d282358a0292b2696c58c52f1e68d6 377 PRINTS PR00207 Flagellin signature 111 134 2.5E-27 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VEA_002805 83d282358a0292b2696c58c52f1e68d6 377 PRINTS PR00207 Flagellin signature 76 95 2.5E-27 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VEA_002805 83d282358a0292b2696c58c52f1e68d6 377 Pfam PF07196 Flagellin hook IN motif 194 249 1.1E-11 T 13-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VEA_002805 83d282358a0292b2696c58c52f1e68d6 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 5.3E-42 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VEA_002805 83d282358a0292b2696c58c52f1e68d6 377 Gene3D G3DSA:1.10.8.410 328 376 1.9E-20 T 13-10-2018 VEA_000389 b4762476ecd97d87e5785b492df4b0f3 42 Pfam PF10617 Protein of unknown function (DUF2474) 4 42 1.5E-17 T 13-10-2018 IPR018895 Protein of unknown function DUF2474 VEA_002060 a70b82c34466b5eef6612fbf95115fe3 159 Pfam PF04361 Protein of unknown function (DUF494) 2 159 4.6E-59 T 13-10-2018 IPR007456 Smg VEA_002060 a70b82c34466b5eef6612fbf95115fe3 159 Hamap MF_00598 Protein Smg [smg]. 2 159 32.527 T 13-10-2018 IPR007456 Smg VEA_002225 258452a831dcc4057dea05927a6fb41b 548 SUPERFAMILY SSF52029 185 376 1.94E-83 T 13-10-2018 IPR027409 GroEL-like apical domain superfamily VEA_002225 258452a831dcc4057dea05927a6fb41b 548 Gene3D G3DSA:1.10.560.10 8 521 2.4E-238 T 13-10-2018 IPR027413 GroEL-like equatorial domain superfamily VEA_002225 258452a831dcc4057dea05927a6fb41b 548 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 1.3E-254 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VEA_002225 258452a831dcc4057dea05927a6fb41b 548 SUPERFAMILY SSF48592 3 230 1.31E-65 T 13-10-2018 IPR027413 GroEL-like equatorial domain superfamily VEA_002225 258452a831dcc4057dea05927a6fb41b 548 Hamap MF_00600 60 kDa chaperonin [groL]. 2 547 41.512 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VEA_002225 258452a831dcc4057dea05927a6fb41b 548 Gene3D G3DSA:3.50.7.10 173 379 2.4E-238 T 13-10-2018 IPR027409 GroEL-like apical domain superfamily VEA_002225 258452a831dcc4057dea05927a6fb41b 548 PRINTS PR00298 60kDa chaperonin signature 350 375 2.0E-73 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VEA_002225 258452a831dcc4057dea05927a6fb41b 548 PRINTS PR00298 60kDa chaperonin signature 398 419 2.0E-73 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VEA_002225 258452a831dcc4057dea05927a6fb41b 548 PRINTS PR00298 60kDa chaperonin signature 27 53 2.0E-73 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VEA_002225 258452a831dcc4057dea05927a6fb41b 548 PRINTS PR00298 60kDa chaperonin signature 83 110 2.0E-73 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VEA_002225 258452a831dcc4057dea05927a6fb41b 548 PRINTS PR00298 60kDa chaperonin signature 268 291 2.0E-73 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VEA_002225 258452a831dcc4057dea05927a6fb41b 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 2.3E-98 T 13-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 VEA_002225 258452a831dcc4057dea05927a6fb41b 548 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 13-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VEA_002225 258452a831dcc4057dea05927a6fb41b 548 SUPERFAMILY SSF48592 372 525 2.29E-32 T 13-10-2018 IPR027413 GroEL-like equatorial domain superfamily VEA_002225 258452a831dcc4057dea05927a6fb41b 548 Gene3D G3DSA:3.30.260.10 138 410 2.4E-238 T 13-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily VEA_002789 2a2603007e4a7fe9c57f15b1fe6ff759 78 SUPERFAMILY SSF64307 2 69 4.45E-8 T 13-10-2018 IPR036868 TusA-like domain superfamily VEA_002789 2a2603007e4a7fe9c57f15b1fe6ff759 78 Pfam PF01206 Sulfurtransferase TusA 3 72 1.4E-9 T 13-10-2018 IPR001455 TusA-like domain VEA_002789 2a2603007e4a7fe9c57f15b1fe6ff759 78 Gene3D G3DSA:3.30.110.40 1 74 1.0E-5 T 13-10-2018 IPR036868 TusA-like domain superfamily VEA_004493 28d5ea4d7c66979f9277801401852bda 360 Pfam PF00953 Glycosyl transferase family 4 99 283 4.0E-37 T 13-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 VEA_004493 28d5ea4d7c66979f9277801401852bda 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 9.3E-6 T 13-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEA_004493 28d5ea4d7c66979f9277801401852bda 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 13-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEA_004493 28d5ea4d7c66979f9277801401852bda 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 7.1E-157 T 13-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEA_004493 28d5ea4d7c66979f9277801401852bda 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 13-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEA_004493 28d5ea4d7c66979f9277801401852bda 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.421 T 13-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEA_001270 9d70f600791b71bee130dad103fa4d7a 158 Pfam PF14316 Domain of unknown function (DUF4381) 9 146 4.4E-36 T 13-10-2018 IPR025489 Protein of unknown function (DUF4381 VEA_004043 b15dbd60962eb15e10eb7bdd15d4bc78 426 SMART SM00382 113 266 2.0E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_004043 b15dbd60962eb15e10eb7bdd15d4bc78 426 SMART SM00994 13 52 1.0E-24 T 13-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 VEA_004043 b15dbd60962eb15e10eb7bdd15d4bc78 426 SUPERFAMILY SSF57716 14 49 5.84E-12 T 13-10-2018 VEA_004043 b15dbd60962eb15e10eb7bdd15d4bc78 426 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 312 1.1E-48 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VEA_004043 b15dbd60962eb15e10eb7bdd15d4bc78 426 Gene3D G3DSA:3.40.50.300 59 317 1.1E-108 T 13-10-2018 VEA_004043 b15dbd60962eb15e10eb7bdd15d4bc78 426 SMART SM01086 319 414 4.5E-34 T 13-10-2018 IPR019489 Clp ATPase, C-terminal VEA_004043 b15dbd60962eb15e10eb7bdd15d4bc78 426 Gene3D G3DSA:1.10.8.60 318 426 3.2E-41 T 13-10-2018 VEA_004043 b15dbd60962eb15e10eb7bdd15d4bc78 426 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 396 1.0E-15 T 13-10-2018 IPR019489 Clp ATPase, C-terminal VEA_004043 b15dbd60962eb15e10eb7bdd15d4bc78 426 Gene3D G3DSA:3.30.50.30 2 53 1.4E-26 T 13-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily VEA_004043 b15dbd60962eb15e10eb7bdd15d4bc78 426 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 12 414 1.5E-209 T 13-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 VEA_004043 b15dbd60962eb15e10eb7bdd15d4bc78 426 Pfam PF06689 ClpX C4-type zinc finger 14 51 1.2E-20 T 13-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 VEA_004043 b15dbd60962eb15e10eb7bdd15d4bc78 426 SUPERFAMILY SSF52540 63 404 5.86E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_004043 b15dbd60962eb15e10eb7bdd15d4bc78 426 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 5 417 53.321 T 13-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 VEA_000548 012fcb93b8a268c8736257da3efb9d89 477 SUPERFAMILY SSF51735 128 304 4.05E-45 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_000548 012fcb93b8a268c8736257da3efb9d89 477 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 286 293 - T 13-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_000548 012fcb93b8a268c8736257da3efb9d89 477 SMART SM00846 127 288 1.2E-52 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_000548 012fcb93b8a268c8736257da3efb9d89 477 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 129 462 3.4E-113 T 13-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_000548 012fcb93b8a268c8736257da3efb9d89 477 SUPERFAMILY SSF55347 288 451 1.93E-52 T 13-10-2018 VEA_000548 012fcb93b8a268c8736257da3efb9d89 477 Gene3D G3DSA:3.40.50.720 129 462 2.5E-114 T 13-10-2018 VEA_000548 012fcb93b8a268c8736257da3efb9d89 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 282 300 2.0E-17 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_000548 012fcb93b8a268c8736257da3efb9d89 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 246 259 2.0E-17 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_000548 012fcb93b8a268c8736257da3efb9d89 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 309 325 2.0E-17 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_000548 012fcb93b8a268c8736257da3efb9d89 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 365 382 2.0E-17 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_000548 012fcb93b8a268c8736257da3efb9d89 477 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 128 238 4.5E-22 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_000548 012fcb93b8a268c8736257da3efb9d89 477 Gene3D G3DSA:3.30.360.10 287 452 2.5E-114 T 13-10-2018 VEA_000548 012fcb93b8a268c8736257da3efb9d89 477 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 293 450 2.4E-44 T 13-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VEA_002227 ac07bc146078ebeb19b253229d2cf573 128 Pfam PF02796 Helix-turn-helix domain of resolvase 83 124 1.1E-7 T 13-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 VEA_002227 ac07bc146078ebeb19b253229d2cf573 128 Gene3D G3DSA:1.10.10.60 88 123 3.6E-6 T 13-10-2018 VEA_002227 ac07bc146078ebeb19b253229d2cf573 128 SUPERFAMILY SSF46689 84 125 4.66E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_002227 ac07bc146078ebeb19b253229d2cf573 128 SUPERFAMILY SSF53041 1 81 4.45E-17 T 13-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 VEA_002227 ac07bc146078ebeb19b253229d2cf573 128 Pfam PF00239 Resolvase, N terminal domain 1 81 6.6E-19 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VEA_002227 ac07bc146078ebeb19b253229d2cf573 128 Gene3D G3DSA:3.40.50.1390 1 87 4.4E-18 T 13-10-2018 VEA_004024 06d296cb43d06381f207a71cc417e916 196 SUPERFAMILY SSF46689 5 77 4.03E-6 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_004024 06d296cb43d06381f207a71cc417e916 196 Gene3D G3DSA:1.10.357.10 1 191 4.6E-41 T 13-10-2018 VEA_004024 06d296cb43d06381f207a71cc417e916 196 SUPERFAMILY SSF48498 82 195 8.9E-20 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VEA_004024 06d296cb43d06381f207a71cc417e916 196 Pfam PF13305 WHG domain 93 172 6.9E-11 T 13-10-2018 IPR025996 WHG domain VEA_003496 7072b8e42cded1895e14da87a0f69dc2 208 Pfam PF02613 Nitrate reductase delta subunit 43 156 5.2E-31 T 13-10-2018 IPR020945 DMSO/Nitrate reductase chaperone VEA_003496 7072b8e42cded1895e14da87a0f69dc2 208 SUPERFAMILY SSF89155 4 189 5.89E-53 T 13-10-2018 IPR036411 TorD-like superfamily VEA_003496 7072b8e42cded1895e14da87a0f69dc2 208 Gene3D G3DSA:1.10.3480.10 1 195 2.9E-41 T 13-10-2018 VEA_000746 055a49be4c5461e31e296c22548736c5 81 Pfam PF03891 Domain of unknown function (DUF333) 27 71 2.3E-17 T 13-10-2018 IPR005590 Protein of unknown function DUF333 VEA_001725 900b2d690212fb47a4196e3caf46e53c 167 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 2.2E-69 T 13-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 VEA_001725 900b2d690212fb47a4196e3caf46e53c 167 Pfam PF00333 Ribosomal protein S5, N-terminal domain 12 75 6.1E-29 T 13-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 VEA_001725 900b2d690212fb47a4196e3caf46e53c 167 SUPERFAMILY SSF54768 8 76 5.86E-24 T 13-10-2018 VEA_001725 900b2d690212fb47a4196e3caf46e53c 167 ProSitePatterns PS00585 Ribosomal protein S5 signature. 29 61 - T 13-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site VEA_001725 900b2d690212fb47a4196e3caf46e53c 167 SUPERFAMILY SSF54211 80 159 4.05E-27 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEA_001725 900b2d690212fb47a4196e3caf46e53c 167 Gene3D G3DSA:3.30.160.20 2 73 1.2E-31 T 13-10-2018 VEA_001725 900b2d690212fb47a4196e3caf46e53c 167 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 164 34.61 T 13-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 VEA_001725 900b2d690212fb47a4196e3caf46e53c 167 Gene3D G3DSA:3.30.230.10 75 167 5.0E-37 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VEA_001725 900b2d690212fb47a4196e3caf46e53c 167 Pfam PF03719 Ribosomal protein S5, C-terminal domain 88 158 2.6E-30 T 13-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 VEA_003256 30f34349d80e23ee1e8634d4b624d9af 133 Gene3D G3DSA:3.30.428.10 2 133 3.8E-29 T 13-10-2018 IPR036265 HIT-like superfamily VEA_003256 30f34349d80e23ee1e8634d4b624d9af 133 Pfam PF01230 HIT domain 11 107 8.7E-19 T 13-10-2018 IPR001310 Histidine triad (HIT) protein VEA_003256 30f34349d80e23ee1e8634d4b624d9af 133 PRINTS PR00332 Histidine triad family signature 93 103 7.5E-9 T 13-10-2018 IPR001310 Histidine triad (HIT) protein VEA_003256 30f34349d80e23ee1e8634d4b624d9af 133 PRINTS PR00332 Histidine triad family signature 25 43 7.5E-9 T 13-10-2018 IPR001310 Histidine triad (HIT) protein VEA_003256 30f34349d80e23ee1e8634d4b624d9af 133 PRINTS PR00332 Histidine triad family signature 4 20 7.5E-9 T 13-10-2018 IPR001310 Histidine triad (HIT) protein VEA_003256 30f34349d80e23ee1e8634d4b624d9af 133 SUPERFAMILY SSF54197 1 119 1.45E-29 T 13-10-2018 IPR036265 HIT-like superfamily VEA_000151 9eebbceb429fe47ddac22be2f26ccfad 122 Pfam PF12472 Phage related protein 63 119 1.4E-20 T 13-10-2018 IPR021096 Vibrio phage VSK, Orf152 VEA_004137 3b14ef420e60c961de2a8da4ad2bef9a 634 SUPERFAMILY SSF55874 10 216 7.86E-64 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_004137 3b14ef420e60c961de2a8da4ad2bef9a 634 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 176 1.7E-12 T 13-10-2018 VEA_004137 3b14ef420e60c961de2a8da4ad2bef9a 634 PIRSF PIRSF002583 1 634 2.7E-212 T 13-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 VEA_004137 3b14ef420e60c961de2a8da4ad2bef9a 634 Hamap MF_00505 Chaperone protein HtpG [htpG]. 7 632 32.349 T 13-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 VEA_004137 3b14ef420e60c961de2a8da4ad2bef9a 634 SUPERFAMILY SSF110942 520 632 6.28E-34 T 13-10-2018 IPR037196 HSP90, C-terminal domain VEA_004137 3b14ef420e60c961de2a8da4ad2bef9a 634 SUPERFAMILY SSF54211 238 493 1.06E-99 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEA_004137 3b14ef420e60c961de2a8da4ad2bef9a 634 Pfam PF00183 Hsp90 protein 226 632 1.1E-126 T 13-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 VEA_004137 3b14ef420e60c961de2a8da4ad2bef9a 634 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 30 39 - T 13-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 VEA_004137 3b14ef420e60c961de2a8da4ad2bef9a 634 Gene3D G3DSA:3.40.50.11260 410 501 1.2E-34 T 13-10-2018 VEA_004137 3b14ef420e60c961de2a8da4ad2bef9a 634 Gene3D G3DSA:1.20.120.790 502 632 1.9E-42 T 13-10-2018 IPR037196 HSP90, C-terminal domain VEA_004137 3b14ef420e60c961de2a8da4ad2bef9a 634 SMART SM00387 32 189 8.1E-7 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_004137 3b14ef420e60c961de2a8da4ad2bef9a 634 PRINTS PR00775 90kDa heat shock protein signature 177 194 3.0E-62 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VEA_004137 3b14ef420e60c961de2a8da4ad2bef9a 634 PRINTS PR00775 90kDa heat shock protein signature 195 213 3.0E-62 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VEA_004137 3b14ef420e60c961de2a8da4ad2bef9a 634 PRINTS PR00775 90kDa heat shock protein signature 31 53 3.0E-62 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VEA_004137 3b14ef420e60c961de2a8da4ad2bef9a 634 PRINTS PR00775 90kDa heat shock protein signature 98 115 3.0E-62 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VEA_004137 3b14ef420e60c961de2a8da4ad2bef9a 634 PRINTS PR00775 90kDa heat shock protein signature 10 30 3.0E-62 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VEA_004137 3b14ef420e60c961de2a8da4ad2bef9a 634 PRINTS PR00775 90kDa heat shock protein signature 125 147 3.0E-62 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VEA_004137 3b14ef420e60c961de2a8da4ad2bef9a 634 PRINTS PR00775 90kDa heat shock protein signature 80 97 3.0E-62 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VEA_004137 3b14ef420e60c961de2a8da4ad2bef9a 634 Gene3D G3DSA:3.30.565.10 6 219 3.9E-76 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_004137 3b14ef420e60c961de2a8da4ad2bef9a 634 Gene3D G3DSA:3.30.230.80 237 409 2.2E-70 T 13-10-2018 VEA_001171 166ec702fb098fcaab014e5fc9eece00 128 PIRSF PIRSF039090 1 128 1.7E-39 T 13-10-2018 IPR003713 Flagellar protein FliS GO:0044780 VEA_001171 166ec702fb098fcaab014e5fc9eece00 128 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 123 6.6E-23 T 13-10-2018 IPR003713 Flagellar protein FliS GO:0044780 VEA_001171 166ec702fb098fcaab014e5fc9eece00 128 SUPERFAMILY SSF101116 9 126 2.22E-34 T 13-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 VEA_001171 166ec702fb098fcaab014e5fc9eece00 128 Pfam PF02561 Flagellar protein FliS 7 122 3.0E-32 T 13-10-2018 IPR003713 Flagellar protein FliS GO:0044780 VEA_001171 166ec702fb098fcaab014e5fc9eece00 128 Gene3D G3DSA:1.20.120.340 1 127 9.3E-36 T 13-10-2018 VEA_002386 10be3c87f992eeff351e60fb800adcd9 189 SUPERFAMILY SSF52972 5 187 2.42E-63 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VEA_002386 10be3c87f992eeff351e60fb800adcd9 189 Hamap MF_00528 Septum formation protein Maf [maf]. 6 189 29.779 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 VEA_002386 10be3c87f992eeff351e60fb800adcd9 189 Gene3D G3DSA:3.90.950.10 5 189 1.0E-70 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VEA_002386 10be3c87f992eeff351e60fb800adcd9 189 PIRSF PIRSF006305 2 189 3.1E-57 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 VEA_002386 10be3c87f992eeff351e60fb800adcd9 189 Pfam PF02545 Maf-like protein 7 187 1.0E-60 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 VEA_002386 10be3c87f992eeff351e60fb800adcd9 189 TIGRFAM TIGR00172 maf: septum formation protein Maf 6 184 1.3E-55 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 VEA_001291 10aff167008405a16de0070be1f8b3c1 578 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 15 523 2.3E-179 T 13-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VEA_001291 10aff167008405a16de0070be1f8b3c1 578 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 54 390 4.4E-124 T 13-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VEA_003871 1ec8e761b14e2fdeea240175f295c8c8 350 SMART SM00876 220 312 3.0E-45 T 13-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VEA_003871 1ec8e761b14e2fdeea240175f295c8c8 350 PIRSF PIRSF001619 1 319 2.2E-137 T 13-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VEA_003871 1ec8e761b14e2fdeea240175f295c8c8 350 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.501 T 13-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VEA_003871 1ec8e761b14e2fdeea240175f295c8c8 350 Pfam PF04055 Radical SAM superfamily 50 199 3.5E-14 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VEA_003871 1ec8e761b14e2fdeea240175f295c8c8 350 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 6.0E-20 T 13-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VEA_003871 1ec8e761b14e2fdeea240175f295c8c8 350 TIGRFAM TIGR00433 bioB: biotin synthase 15 310 8.0E-124 T 13-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VEA_003871 1ec8e761b14e2fdeea240175f295c8c8 350 SUPERFAMILY SSF102114 5 310 6.15E-88 T 13-10-2018 VEA_003871 1ec8e761b14e2fdeea240175f295c8c8 350 Gene3D G3DSA:3.20.20.70 4 315 1.4E-131 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_003871 1ec8e761b14e2fdeea240175f295c8c8 350 SMART SM00729 43 255 1.1E-40 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VEA_002451 29a24f5b7da3d2ae23bedc8f38512403 200 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 196 50.852 T 13-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 VEA_002451 29a24f5b7da3d2ae23bedc8f38512403 200 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 194 7.5E-65 T 13-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 VEA_002451 29a24f5b7da3d2ae23bedc8f38512403 200 Gene3D G3DSA:3.90.950.10 1 199 1.4E-83 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VEA_002451 29a24f5b7da3d2ae23bedc8f38512403 200 Pfam PF01725 Ham1 family 4 191 6.5E-58 T 13-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 VEA_002451 29a24f5b7da3d2ae23bedc8f38512403 200 SUPERFAMILY SSF52972 1 195 7.59E-74 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VEA_003804 b7992820e71de144cf56c43661f9afc9 484 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 484 49.989 T 13-10-2018 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 VEA_003804 b7992820e71de144cf56c43661f9afc9 484 SUPERFAMILY SSF56024 70 313 3.14E-51 T 13-10-2018 VEA_003804 b7992820e71de144cf56c43661f9afc9 484 SUPERFAMILY SSF56024 273 469 2.06E-47 T 13-10-2018 VEA_003804 b7992820e71de144cf56c43661f9afc9 484 Pfam PF13396 Phospholipase_D-nuclease N-terminal 22 59 7.6E-7 T 13-10-2018 IPR027379 Cardiolipin synthase N-terminal VEA_003804 b7992820e71de144cf56c43661f9afc9 484 Gene3D G3DSA:3.30.870.10 116 307 1.3E-37 T 13-10-2018 VEA_003804 b7992820e71de144cf56c43661f9afc9 484 SMART SM00155 219 246 4.0E-6 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VEA_003804 b7992820e71de144cf56c43661f9afc9 484 SMART SM00155 397 424 9.5E-7 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VEA_003804 b7992820e71de144cf56c43661f9afc9 484 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 12 484 2.2E-156 T 13-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 VEA_003804 b7992820e71de144cf56c43661f9afc9 484 Pfam PF13091 PLD-like domain 327 444 6.9E-24 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VEA_003804 b7992820e71de144cf56c43661f9afc9 484 Pfam PF13091 PLD-like domain 134 268 1.5E-16 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VEA_003804 b7992820e71de144cf56c43661f9afc9 484 PIRSF PIRSF000850 102 253 2.3 T 13-10-2018 VEA_003804 b7992820e71de144cf56c43661f9afc9 484 PIRSF PIRSF000850 389 482 0.063 T 13-10-2018 VEA_003804 b7992820e71de144cf56c43661f9afc9 484 PIRSF PIRSF000850 297 377 0.079 T 13-10-2018 VEA_003804 b7992820e71de144cf56c43661f9afc9 484 Gene3D G3DSA:3.30.870.10 315 458 8.4E-24 T 13-10-2018 VEA_003296 ffa298b3756c0d38b92b2e9648583c94 198 Gene3D G3DSA:3.40.30.10 1 80 2.0E-24 T 13-10-2018 VEA_003296 ffa298b3756c0d38b92b2e9648583c94 198 Gene3D G3DSA:1.20.1050.10 81 196 6.2E-37 T 13-10-2018 VEA_003296 ffa298b3756c0d38b92b2e9648583c94 198 Pfam PF00043 Glutathione S-transferase, C-terminal domain 114 185 9.5E-11 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal VEA_003296 ffa298b3756c0d38b92b2e9648583c94 198 SUPERFAMILY SSF47616 72 197 2.32E-25 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VEA_003296 ffa298b3756c0d38b92b2e9648583c94 198 SUPERFAMILY SSF52833 1 78 2.68E-21 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VEA_003296 ffa298b3756c0d38b92b2e9648583c94 198 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 76 5.6E-13 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VEA_001910 b8485d85335a44373d7504931ac03920 334 Pfam PF00962 Adenosine/AMP deaminase 5 326 1.9E-89 T 13-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 VEA_001910 b8485d85335a44373d7504931ac03920 334 SUPERFAMILY SSF51556 3 326 9.08E-74 T 13-10-2018 IPR032466 Metal-dependent hydrolase VEA_001910 b8485d85335a44373d7504931ac03920 334 Hamap MF_00540 Adenosine deaminase [add]. 1 331 54.473 T 13-10-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 VEA_001910 b8485d85335a44373d7504931ac03920 334 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 330 4.7E-121 T 13-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 VEA_001910 b8485d85335a44373d7504931ac03920 334 Gene3D G3DSA:3.20.20.140 1 334 6.3E-97 T 13-10-2018 VEA_002452 2299710955b6c2123e18b332917201b0 143 Gene3D G3DSA:2.60.40.3340 14 143 1.3E-40 T 13-10-2018 VEA_002452 2299710955b6c2123e18b332917201b0 143 Pfam PF14467 Domain of unknown function (DUF4426) 23 142 2.0E-48 T 13-10-2018 IPR025218 Domain of unknown function DUF4426 VEA_002816 9c26361cb2c0a4f46a1f0ca7273d416a 351 SUPERFAMILY SSF48029 25 135 7.06E-20 T 13-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical VEA_002816 9c26361cb2c0a4f46a1f0ca7273d416a 351 Gene3D G3DSA:1.10.220.30 108 212 2.4E-29 T 13-10-2018 VEA_002816 9c26361cb2c0a4f46a1f0ca7273d416a 351 Pfam PF14842 FliG N-terminal domain 24 124 3.4E-28 T 13-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain VEA_002816 9c26361cb2c0a4f46a1f0ca7273d416a 351 SUPERFAMILY SSF48029 133 344 1.57E-66 T 13-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical VEA_002816 9c26361cb2c0a4f46a1f0ca7273d416a 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 24 40 1.4E-59 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VEA_002816 9c26361cb2c0a4f46a1f0ca7273d416a 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 53 79 1.4E-59 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VEA_002816 9c26361cb2c0a4f46a1f0ca7273d416a 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 267 287 1.4E-59 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VEA_002816 9c26361cb2c0a4f46a1f0ca7273d416a 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 245 265 1.4E-59 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VEA_002816 9c26361cb2c0a4f46a1f0ca7273d416a 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 214 239 1.4E-59 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VEA_002816 9c26361cb2c0a4f46a1f0ca7273d416a 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 133 156 1.4E-59 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VEA_002816 9c26361cb2c0a4f46a1f0ca7273d416a 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 291 317 1.4E-59 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VEA_002816 9c26361cb2c0a4f46a1f0ca7273d416a 351 Pfam PF14841 FliG middle domain 134 206 4.5E-26 T 13-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain VEA_002816 9c26361cb2c0a4f46a1f0ca7273d416a 351 Pfam PF01706 FliG C-terminal domain 236 343 2.4E-40 T 13-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal VEA_002816 9c26361cb2c0a4f46a1f0ca7273d416a 351 PIRSF PIRSF003161 18 351 8.1E-114 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VEA_002816 9c26361cb2c0a4f46a1f0ca7273d416a 351 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 20 349 6.7E-98 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VEA_002816 9c26361cb2c0a4f46a1f0ca7273d416a 351 Gene3D G3DSA:1.10.220.30 19 103 7.8E-18 T 13-10-2018 VEA_002816 9c26361cb2c0a4f46a1f0ca7273d416a 351 Gene3D G3DSA:1.10.220.30 214 351 6.9E-43 T 13-10-2018 VEA_001574 b411f9fdd49685da7cb44f636477c348 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 111 1.2E-16 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VEA_001574 b411f9fdd49685da7cb44f636477c348 229 Gene3D G3DSA:1.10.3720.10 2 218 3.3E-46 T 13-10-2018 IPR035906 MetI-like superfamily VEA_001574 b411f9fdd49685da7cb44f636477c348 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 216 7.7E-21 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_001574 b411f9fdd49685da7cb44f636477c348 229 SUPERFAMILY SSF161098 10 202 1.44E-37 T 13-10-2018 IPR035906 MetI-like superfamily VEA_000024 8a0c0001fda1c1b44b963860960ae499 154 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 5 144 9.4E-32 T 13-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein VEA_000024 8a0c0001fda1c1b44b963860960ae499 154 Pfam PF04965 Gene 25-like lysozyme 31 130 8.1E-17 T 13-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD VEA_000024 8a0c0001fda1c1b44b963860960ae499 154 SUPERFAMILY SSF160719 31 141 1.57E-7 T 13-10-2018 VEA_002005 c22faa14d58f4f2443e880055a912a71 138 SUPERFAMILY SSF54534 47 121 1.57E-10 T 13-10-2018 VEA_002005 c22faa14d58f4f2443e880055a912a71 138 PIRSF PIRSF006092 33 123 1.6E-7 T 13-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 VEA_002005 c22faa14d58f4f2443e880055a912a71 138 Gene3D G3DSA:3.10.50.30 45 129 6.4E-11 T 13-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 VEA_002005 c22faa14d58f4f2443e880055a912a71 138 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 49 119 3.2E-9 T 13-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VEA_003863 3fc85ee1611bae81ed922de6550c4fd0 436 Gene3D G3DSA:3.30.70.1990 288 369 1.5E-26 T 13-10-2018 VEA_003863 3fc85ee1611bae81ed922de6550c4fd0 436 Gene3D G3DSA:3.50.50.60 9 403 1.5E-26 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_003863 3fc85ee1611bae81ed922de6550c4fd0 436 Pfam PF01593 Flavin containing amine oxidoreductase 16 306 4.4E-18 T 13-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 VEA_003863 3fc85ee1611bae81ed922de6550c4fd0 436 Gene3D G3DSA:1.10.405.20 81 205 1.5E-26 T 13-10-2018 VEA_003863 3fc85ee1611bae81ed922de6550c4fd0 436 SUPERFAMILY SSF51905 6 420 1.17E-49 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_003501 5ed90ca78baa741e8b95eac965974aca 530 SUPERFAMILY SSF52540 333 517 6.8E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003501 5ed90ca78baa741e8b95eac965974aca 530 Gene3D G3DSA:3.40.50.300 2 281 3.0E-56 T 13-10-2018 VEA_003501 5ed90ca78baa741e8b95eac965974aca 530 SUPERFAMILY SSF52540 7 237 1.13E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003501 5ed90ca78baa741e8b95eac965974aca 530 Pfam PF12848 ABC transporter 224 309 3.2E-21 T 13-10-2018 IPR032781 ABC-transporter extension domain VEA_003501 5ed90ca78baa741e8b95eac965974aca 530 Gene3D G3DSA:3.40.50.300 282 529 3.6E-50 T 13-10-2018 VEA_003501 5ed90ca78baa741e8b95eac965974aca 530 Pfam PF00005 ABC transporter 337 466 7.1E-21 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_003501 5ed90ca78baa741e8b95eac965974aca 530 SMART SM00382 26 238 4.6E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_003501 5ed90ca78baa741e8b95eac965974aca 530 SMART SM00382 343 511 1.1E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_003501 5ed90ca78baa741e8b95eac965974aca 530 Pfam PF00005 ABC transporter 18 184 2.4E-20 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_002718 93649ac12ebd9028ee09099b4bc78542 159 Gene3D G3DSA:3.10.50.30 76 159 2.4E-7 T 13-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 VEA_002718 93649ac12ebd9028ee09099b4bc78542 159 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 84 158 4.1E-7 T 13-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VEA_002718 93649ac12ebd9028ee09099b4bc78542 159 PIRSF PIRSF006092 2 159 1.7E-7 T 13-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 VEA_002718 93649ac12ebd9028ee09099b4bc78542 159 SUPERFAMILY SSF54534 83 158 1.83E-10 T 13-10-2018 VEA_001255 3067bcca7fe8bfae4ca24ae97ed3820c 443 Pfam PF00271 Helicase conserved C-terminal domain 235 341 1.1E-29 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_001255 3067bcca7fe8bfae4ca24ae97ed3820c 443 Gene3D G3DSA:3.40.50.300 1 212 4.3E-74 T 13-10-2018 VEA_001255 3067bcca7fe8bfae4ca24ae97ed3820c 443 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VEA_001255 3067bcca7fe8bfae4ca24ae97ed3820c 443 SMART SM00487 20 223 1.3E-53 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEA_001255 3067bcca7fe8bfae4ca24ae97ed3820c 443 Gene3D G3DSA:3.40.50.300 214 430 8.9E-51 T 13-10-2018 VEA_001255 3067bcca7fe8bfae4ca24ae97ed3820c 443 SUPERFAMILY SSF52540 73 359 3.01E-68 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001255 3067bcca7fe8bfae4ca24ae97ed3820c 443 Pfam PF00270 DEAD/DEAH box helicase 25 196 1.7E-48 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VEA_001255 3067bcca7fe8bfae4ca24ae97ed3820c 443 SMART SM00490 260 341 2.7E-30 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_002770 91bf6d55ffb9d8f5567425d177818534 252 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 252 45.391 T 13-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 VEA_002770 91bf6d55ffb9d8f5567425d177818534 252 PIRSF PIRSF005457 1 252 3.1E-98 T 13-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 VEA_002770 91bf6d55ffb9d8f5567425d177818534 252 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 252 1.8E-103 T 13-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 VEA_002770 91bf6d55ffb9d8f5567425d177818534 252 SMART SM00849 12 166 1.1E-32 T 13-10-2018 IPR001279 Metallo-beta-lactamase VEA_002770 91bf6d55ffb9d8f5567425d177818534 252 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 167 252 2.7E-26 T 13-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 VEA_002770 91bf6d55ffb9d8f5567425d177818534 252 SUPERFAMILY SSF56281 2 252 5.5E-69 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEA_002770 91bf6d55ffb9d8f5567425d177818534 252 Gene3D G3DSA:3.60.15.10 1 252 1.3E-92 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEA_004156 a9f2049d181ab3789a07a66b6b9322bf 322 SUPERFAMILY SSF53686 3 313 1.57E-96 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VEA_004156 a9f2049d181ab3789a07a66b6b9322bf 322 Gene3D G3DSA:3.40.50.1100 43 145 7.3E-126 T 13-10-2018 VEA_004156 a9f2049d181ab3789a07a66b6b9322bf 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 13-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 VEA_004156 a9f2049d181ab3789a07a66b6b9322bf 322 Gene3D G3DSA:3.40.50.1100 12 306 7.3E-126 T 13-10-2018 VEA_004156 a9f2049d181ab3789a07a66b6b9322bf 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 299 1.0E-68 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VEA_004156 a9f2049d181ab3789a07a66b6b9322bf 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 311 1.1E-142 T 13-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 VEA_004156 a9f2049d181ab3789a07a66b6b9322bf 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 311 1.5E-135 T 13-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 VEA_004526 43cda07375e51373389f1c629812a031 257 SUPERFAMILY SSF81324 11 210 5.78E-45 T 13-10-2018 VEA_004526 43cda07375e51373389f1c629812a031 257 PRINTS PR00169 Potassium channel signature 154 176 6.0E-5 T 13-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VEA_004526 43cda07375e51373389f1c629812a031 257 PRINTS PR00169 Potassium channel signature 70 90 6.0E-5 T 13-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VEA_004526 43cda07375e51373389f1c629812a031 257 PRINTS PR00169 Potassium channel signature 183 209 6.0E-5 T 13-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VEA_004526 43cda07375e51373389f1c629812a031 257 Gene3D G3DSA:1.20.120.350 9 123 9.2E-15 T 13-10-2018 IPR027359 Voltage-dependent channel domain superfamily VEA_004526 43cda07375e51373389f1c629812a031 257 Gene3D G3DSA:1.10.287.70 124 225 8.7E-25 T 13-10-2018 VEA_004526 43cda07375e51373389f1c629812a031 257 Pfam PF07885 Ion channel 131 210 2.2E-14 T 13-10-2018 IPR013099 Potassium channel domain VEA_002433 160ada75b39c5b490a2d283dec2b734c 221 Gene3D G3DSA:3.40.50.720 1 221 8.0E-52 T 13-10-2018 VEA_002433 160ada75b39c5b490a2d283dec2b734c 221 SUPERFAMILY SSF51735 2 207 4.72E-39 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_002433 160ada75b39c5b490a2d283dec2b734c 221 Pfam PF00106 short chain dehydrogenase 2 183 3.7E-33 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_002433 160ada75b39c5b490a2d283dec2b734c 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 160 2.1E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_002433 160ada75b39c5b490a2d283dec2b734c 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 1 18 2.1E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_002433 160ada75b39c5b490a2d283dec2b734c 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 179 2.1E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_002543 9449b73fd3f5b2fbdc5e9efd7c9658f4 289 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 17 124 5.3E-33 T 13-10-2018 IPR010627 Peptidase A24A, N-terminal VEA_002543 9449b73fd3f5b2fbdc5e9efd7c9658f4 289 Pfam PF01478 Type IV leader peptidase family 135 244 4.6E-28 T 13-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 VEA_002543 9449b73fd3f5b2fbdc5e9efd7c9658f4 289 Gene3D G3DSA:1.20.120.1220 123 284 5.2E-5 T 13-10-2018 VEA_002543 9449b73fd3f5b2fbdc5e9efd7c9658f4 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 143 160 3.2E-30 T 13-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial VEA_002543 9449b73fd3f5b2fbdc5e9efd7c9658f4 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 201 211 3.2E-30 T 13-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial VEA_002543 9449b73fd3f5b2fbdc5e9efd7c9658f4 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 224 239 3.2E-30 T 13-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial VEA_002543 9449b73fd3f5b2fbdc5e9efd7c9658f4 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 212 223 3.2E-30 T 13-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial VEA_000993 acac524d728495a4da21c54282d7c09d 405 Gene3D G3DSA:1.10.1660.30 36 102 6.7E-6 T 13-10-2018 VEA_000993 acac524d728495a4da21c54282d7c09d 405 SUPERFAMILY SSF52540 108 367 1.68E-32 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000993 acac524d728495a4da21c54282d7c09d 405 Pfam PF13614 AAA domain 110 295 1.2E-22 T 13-10-2018 IPR025669 AAA domain VEA_000993 acac524d728495a4da21c54282d7c09d 405 Gene3D G3DSA:3.40.50.300 107 397 1.7E-56 T 13-10-2018 VEA_003852 24c2321492a086593a14e64971647c9c 135 Gene3D G3DSA:1.10.287.1050 1 83 5.7E-30 T 13-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 VEA_003852 24c2321492a086593a14e64971647c9c 135 SMART SM00528 88 135 9.3E-25 T 13-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 VEA_003852 24c2321492a086593a14e64971647c9c 135 Gene3D G3DSA:4.10.430.10 92 135 4.5E-26 T 13-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 VEA_003852 24c2321492a086593a14e64971647c9c 135 PIRSF PIRSF002096 1 135 1.1E-55 T 13-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 VEA_003852 24c2321492a086593a14e64971647c9c 135 Pfam PF00816 H-NS histone family 32 129 5.1E-20 T 13-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 VEA_003852 24c2321492a086593a14e64971647c9c 135 SUPERFAMILY SSF81273 93 135 2.71E-12 T 13-10-2018 VEA_003852 24c2321492a086593a14e64971647c9c 135 SUPERFAMILY SSF81273 2 58 3.73E-17 T 13-10-2018 VEA_004494 1f36c91c9a47a495f18cffdf184f07d5 454 Pfam PF01225 Mur ligase family, catalytic domain 24 91 1.2E-7 T 13-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 VEA_004494 1f36c91c9a47a495f18cffdf184f07d5 454 Gene3D G3DSA:3.90.190.20 315 453 1.4E-37 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VEA_004494 1f36c91c9a47a495f18cffdf184f07d5 454 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 451 33.812 T 13-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VEA_004494 1f36c91c9a47a495f18cffdf184f07d5 454 Pfam PF08245 Mur ligase middle domain 105 295 7.5E-47 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VEA_004494 1f36c91c9a47a495f18cffdf184f07d5 454 Gene3D G3DSA:3.40.1190.10 81 314 2.2E-73 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VEA_004494 1f36c91c9a47a495f18cffdf184f07d5 454 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 450 9.1E-142 T 13-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VEA_004494 1f36c91c9a47a495f18cffdf184f07d5 454 Pfam PF02875 Mur ligase family, glutamate ligase domain 316 393 2.6E-12 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VEA_004494 1f36c91c9a47a495f18cffdf184f07d5 454 SUPERFAMILY SSF63418 1 96 1.7E-26 T 13-10-2018 IPR035911 MurE/MurF, N-terminal VEA_004494 1f36c91c9a47a495f18cffdf184f07d5 454 Gene3D G3DSA:3.40.1390.10 1 80 5.9E-28 T 13-10-2018 VEA_004494 1f36c91c9a47a495f18cffdf184f07d5 454 SUPERFAMILY SSF53244 316 450 1.03E-34 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VEA_004494 1f36c91c9a47a495f18cffdf184f07d5 454 SUPERFAMILY SSF53623 100 313 2.09E-53 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VEA_003847 a2983cae6c857a680e3e361545b18ac8 346 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 345 53.041 T 13-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 VEA_003847 a2983cae6c857a680e3e361545b18ac8 346 SUPERFAMILY SSF53383 9 343 4.49E-74 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_003847 a2983cae6c857a680e3e361545b18ac8 346 Gene3D G3DSA:3.90.1150.10 4 336 5.9E-121 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEA_003847 a2983cae6c857a680e3e361545b18ac8 346 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 206 215 - T 13-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 VEA_003847 a2983cae6c857a680e3e361545b18ac8 346 Pfam PF00155 Aminotransferase class I and II 42 337 1.1E-55 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VEA_003847 a2983cae6c857a680e3e361545b18ac8 346 Gene3D G3DSA:3.40.640.10 49 253 5.9E-121 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_003847 a2983cae6c857a680e3e361545b18ac8 346 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 6 343 4.8E-118 T 13-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 VEA_001350 c24d581276bd7838efce7bd8e030cb3e 260 Pfam PF00005 ABC transporter 21 170 5.8E-26 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_001350 c24d581276bd7838efce7bd8e030cb3e 260 SUPERFAMILY SSF52540 3 232 1.86E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001350 c24d581276bd7838efce7bd8e030cb3e 260 SMART SM00382 30 219 1.2E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_001350 c24d581276bd7838efce7bd8e030cb3e 260 Gene3D G3DSA:3.40.50.300 1 259 1.8E-61 T 13-10-2018 VEA_001167 54bc4bc649e70ba6281b6aa8e3e7b27f 242 SUPERFAMILY SSF88659 102 173 4.36E-12 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VEA_001167 54bc4bc649e70ba6281b6aa8e3e7b27f 242 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 239 2.1E-25 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VEA_001167 54bc4bc649e70ba6281b6aa8e3e7b27f 242 SUPERFAMILY SSF88659 162 240 2.09E-15 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VEA_001167 54bc4bc649e70ba6281b6aa8e3e7b27f 242 Pfam PF04545 Sigma-70, region 4 189 236 8.5E-10 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 VEA_001167 54bc4bc649e70ba6281b6aa8e3e7b27f 242 Pfam PF04542 Sigma-70 region 2 28 101 1.2E-9 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VEA_001167 54bc4bc649e70ba6281b6aa8e3e7b27f 242 Gene3D G3DSA:1.20.140.160 99 242 2.0E-32 T 13-10-2018 VEA_001167 54bc4bc649e70ba6281b6aa8e3e7b27f 242 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 28 240 4.8E-75 T 13-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VEA_001167 54bc4bc649e70ba6281b6aa8e3e7b27f 242 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 210 236 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEA_001167 54bc4bc649e70ba6281b6aa8e3e7b27f 242 Gene3D G3DSA:1.10.1740.10 13 98 3.8E-17 T 13-10-2018 VEA_001167 54bc4bc649e70ba6281b6aa8e3e7b27f 242 SUPERFAMILY SSF88946 22 100 7.06E-16 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VEA_004423 fcbafa3ce0f5b89f3360d2726b6626de 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 47 3.9E-14 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEA_004423 fcbafa3ce0f5b89f3360d2726b6626de 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 3.9E-14 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEA_004423 fcbafa3ce0f5b89f3360d2726b6626de 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 3.9E-14 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEA_004423 fcbafa3ce0f5b89f3360d2726b6626de 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 3.9E-14 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEA_004423 fcbafa3ce0f5b89f3360d2726b6626de 100 Pfam PF01022 Bacterial regulatory protein, arsR family 23 67 6.4E-17 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEA_004423 fcbafa3ce0f5b89f3360d2726b6626de 100 SMART SM00418 15 93 7.5E-29 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEA_004423 fcbafa3ce0f5b89f3360d2726b6626de 100 Gene3D G3DSA:1.10.10.10 1 98 7.6E-30 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_004423 fcbafa3ce0f5b89f3360d2726b6626de 100 SUPERFAMILY SSF46785 8 96 3.41E-26 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_002107 5a4eb70f4df252614028422919449be2 842 Pfam PF01295 Adenylate cyclase, class-I 226 828 1.3E-255 T 13-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 VEA_002107 5a4eb70f4df252614028422919449be2 842 Pfam PF12633 Adenylate cyclase NT domain 5 198 4.1E-77 T 13-10-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 VEA_002107 5a4eb70f4df252614028422919449be2 842 PIRSF PIRSF001444 1 842 0.0 T 13-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 VEA_000646 7a93e221ad09331174c3d692d44a1b30 354 SMART SM00870 29 348 5.0E-151 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VEA_000646 7a93e221ad09331174c3d692d44a1b30 354 PIRSF PIRSF500176 26 354 1.1E-83 T 13-10-2018 VEA_000646 7a93e221ad09331174c3d692d44a1b30 354 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 16 354 1.9E-162 T 13-10-2018 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 VEA_000646 7a93e221ad09331174c3d692d44a1b30 354 PRINTS PR00139 Asparaginase/glutaminase family signature 30 41 5.4E-24 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VEA_000646 7a93e221ad09331174c3d692d44a1b30 354 PRINTS PR00139 Asparaginase/glutaminase family signature 288 306 5.4E-24 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VEA_000646 7a93e221ad09331174c3d692d44a1b30 354 PRINTS PR00139 Asparaginase/glutaminase family signature 109 127 5.4E-24 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VEA_000646 7a93e221ad09331174c3d692d44a1b30 354 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 32 40 - T 13-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 VEA_000646 7a93e221ad09331174c3d692d44a1b30 354 Pfam PF00710 Asparaginase, N-terminal 29 222 2.6E-62 T 13-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 VEA_000646 7a93e221ad09331174c3d692d44a1b30 354 Gene3D G3DSA:3.40.50.1170 25 240 5.7E-87 T 13-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 VEA_000646 7a93e221ad09331174c3d692d44a1b30 354 Gene3D G3DSA:3.40.50.40 241 354 2.5E-42 T 13-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 VEA_000646 7a93e221ad09331174c3d692d44a1b30 354 PIRSF PIRSF001220 24 354 5.6E-97 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VEA_000646 7a93e221ad09331174c3d692d44a1b30 354 SUPERFAMILY SSF53774 27 352 2.22E-109 T 13-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 VEA_000646 7a93e221ad09331174c3d692d44a1b30 354 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 110 120 - T 13-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 VEA_003627 0880e438a04e6c888444f1c51a94d5fa 231 PIRSF PIRSF006324 20 230 5.3E-55 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEA_003627 0880e438a04e6c888444f1c51a94d5fa 231 Pfam PF01810 LysE type translocator 35 228 1.1E-32 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEA_000320 02b0a7d8b8f79a8758d7f858d6492c68 689 Gene3D G3DSA:3.40.50.300 200 499 2.1E-49 T 13-10-2018 VEA_000320 02b0a7d8b8f79a8758d7f858d6492c68 689 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 166 9.8E-49 T 13-10-2018 IPR022161 DNA helicase IV, N-terminal domain VEA_000320 02b0a7d8b8f79a8758d7f858d6492c68 689 Pfam PF13361 UvrD-like helicase C-terminal domain 596 667 2.5E-17 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VEA_000320 02b0a7d8b8f79a8758d7f858d6492c68 689 Pfam PF00580 UvrD/REP helicase N-terminal domain 201 498 8.8E-40 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 VEA_000320 02b0a7d8b8f79a8758d7f858d6492c68 689 SUPERFAMILY SSF52540 198 678 2.3E-85 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000320 02b0a7d8b8f79a8758d7f858d6492c68 689 Gene3D G3DSA:3.40.50.300 507 681 3.7E-29 T 13-10-2018 VEA_000320 02b0a7d8b8f79a8758d7f858d6492c68 689 Gene3D G3DSA:1.10.10.160 300 416 2.1E-49 T 13-10-2018 IPR013986 DExx box DNA helicase domain superfamily VEA_001964 8d7e1c4684f86120dc2a6af072e58ad9 335 SUPERFAMILY SSF53822 67 322 4.5E-56 T 13-10-2018 IPR028082 Periplasmic binding protein-like I VEA_001964 8d7e1c4684f86120dc2a6af072e58ad9 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 56 3.1E-17 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEA_001964 8d7e1c4684f86120dc2a6af072e58ad9 335 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 68 313 2.3E-29 T 13-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain VEA_001964 8d7e1c4684f86120dc2a6af072e58ad9 335 SUPERFAMILY SSF47413 9 67 1.44E-14 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEA_001964 8d7e1c4684f86120dc2a6af072e58ad9 335 SMART SM00354 9 79 1.0E-25 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEA_001964 8d7e1c4684f86120dc2a6af072e58ad9 335 Gene3D G3DSA:3.40.50.2300 167 295 1.8E-66 T 13-10-2018 VEA_001964 8d7e1c4684f86120dc2a6af072e58ad9 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 12 30 - T 13-10-2018 VEA_001964 8d7e1c4684f86120dc2a6af072e58ad9 335 Gene3D G3DSA:3.40.50.2300 70 311 1.8E-66 T 13-10-2018 VEA_001964 8d7e1c4684f86120dc2a6af072e58ad9 335 Gene3D G3DSA:1.10.260.40 1 67 1.4E-17 T 13-10-2018 VEA_003317 140fe26f2fe33bd3045acfe1f0468930 326 Pfam PF13437 HlyD family secretion protein 208 312 1.5E-8 T 13-10-2018 VEA_003317 140fe26f2fe33bd3045acfe1f0468930 326 Gene3D G3DSA:1.10.287.470 79 108 2.3E-11 T 13-10-2018 VEA_003317 140fe26f2fe33bd3045acfe1f0468930 326 Gene3D G3DSA:2.40.50.100 189 238 2.0E-19 T 13-10-2018 VEA_003317 140fe26f2fe33bd3045acfe1f0468930 326 Gene3D G3DSA:2.40.50.100 44 78 2.3E-11 T 13-10-2018 VEA_003317 140fe26f2fe33bd3045acfe1f0468930 326 Pfam PF13533 Biotin-lipoyl like 47 91 1.6E-12 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VEA_003317 140fe26f2fe33bd3045acfe1f0468930 326 SUPERFAMILY SSF111369 44 109 2.35E-8 T 13-10-2018 VEA_003317 140fe26f2fe33bd3045acfe1f0468930 326 Gene3D G3DSA:1.10.287.470 111 188 2.0E-19 T 13-10-2018 VEA_003317 140fe26f2fe33bd3045acfe1f0468930 326 Gene3D G3DSA:2.40.30.170 239 322 2.0E-19 T 13-10-2018 VEA_004461 bc0160e79b7de742bdb44ed0d30f34bb 238 Pfam PF00072 Response regulator receiver domain 6 113 3.3E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_004461 bc0160e79b7de742bdb44ed0d30f34bb 238 SMART SM00448 4 114 2.9E-37 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_004461 bc0160e79b7de742bdb44ed0d30f34bb 238 SMART SM00862 156 232 2.4E-14 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEA_004461 bc0160e79b7de742bdb44ed0d30f34bb 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.8E-17 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEA_004461 bc0160e79b7de742bdb44ed0d30f34bb 238 SUPERFAMILY SSF52172 2 130 3.98E-36 T 13-10-2018 IPR011006 CheY-like superfamily VEA_004461 bc0160e79b7de742bdb44ed0d30f34bb 238 SUPERFAMILY SSF46894 137 233 9.92E-21 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEA_004461 bc0160e79b7de742bdb44ed0d30f34bb 238 Gene3D G3DSA:1.10.10.10 123 236 5.1E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_004461 bc0160e79b7de742bdb44ed0d30f34bb 238 Gene3D G3DSA:3.40.50.2300 2 122 4.4E-33 T 13-10-2018 VEA_003483 6835a9f3ebc71bcfdcc1616606e8f7a2 256 Gene3D G3DSA:1.10.3720.10 4 256 2.1E-47 T 13-10-2018 IPR035906 MetI-like superfamily VEA_003483 6835a9f3ebc71bcfdcc1616606e8f7a2 256 SUPERFAMILY SSF161098 4 254 4.02E-55 T 13-10-2018 IPR035906 MetI-like superfamily VEA_003483 6835a9f3ebc71bcfdcc1616606e8f7a2 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 250 3.8E-18 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_003025 18ba448ac871acdb4977d2c16e179314 612 PIRSF PIRSF002741 2 573 6.3E-62 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VEA_003025 18ba448ac871acdb4977d2c16e179314 612 Gene3D G3DSA:3.10.105.10 322 548 1.5E-40 T 13-10-2018 VEA_003025 18ba448ac871acdb4977d2c16e179314 612 SUPERFAMILY SSF53850 45 566 6.52E-92 T 13-10-2018 VEA_003025 18ba448ac871acdb4977d2c16e179314 612 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 93 489 2.0E-60 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain VEA_003025 18ba448ac871acdb4977d2c16e179314 612 Gene3D G3DSA:3.40.190.10 19 321 2.0E-43 T 13-10-2018 VEA_004031 ce5fb715a5131d8862f43adbe962dff1 275 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 13 260 34.819 T 13-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 VEA_004031 ce5fb715a5131d8862f43adbe962dff1 275 Pfam PF12697 Alpha/beta hydrolase family 21 252 1.9E-17 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEA_004031 ce5fb715a5131d8862f43adbe962dff1 275 SUPERFAMILY SSF53474 16 262 5.18E-43 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_004031 ce5fb715a5131d8862f43adbe962dff1 275 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 19 259 1.3E-85 T 13-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 VEA_004031 ce5fb715a5131d8862f43adbe962dff1 275 Gene3D G3DSA:3.40.50.1820 9 261 2.8E-66 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_000042 e29e854a3d8de2e5442024343ea613b0 177 PRINTS PR01171 Bacterial lipocalin signature 101 115 2.2E-32 T 13-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VEA_000042 e29e854a3d8de2e5442024343ea613b0 177 PRINTS PR01171 Bacterial lipocalin signature 160 170 2.2E-32 T 13-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VEA_000042 e29e854a3d8de2e5442024343ea613b0 177 PRINTS PR01171 Bacterial lipocalin signature 31 45 2.2E-32 T 13-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VEA_000042 e29e854a3d8de2e5442024343ea613b0 177 PRINTS PR01171 Bacterial lipocalin signature 133 144 2.2E-32 T 13-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VEA_000042 e29e854a3d8de2e5442024343ea613b0 177 PRINTS PR01171 Bacterial lipocalin signature 48 64 2.2E-32 T 13-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VEA_000042 e29e854a3d8de2e5442024343ea613b0 177 PRINTS PR01171 Bacterial lipocalin signature 67 76 2.2E-32 T 13-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VEA_000042 e29e854a3d8de2e5442024343ea613b0 177 Pfam PF08212 Lipocalin-like domain 31 171 1.4E-39 T 13-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain VEA_000042 e29e854a3d8de2e5442024343ea613b0 177 Gene3D G3DSA:2.40.128.20 11 173 8.8E-53 T 13-10-2018 IPR012674 Calycin VEA_000042 e29e854a3d8de2e5442024343ea613b0 177 PIRSF PIRSF036893 1 176 1.8E-46 T 13-10-2018 IPR022271 Lipocalin, ApoD type VEA_000042 e29e854a3d8de2e5442024343ea613b0 177 SUPERFAMILY SSF50814 7 174 1.87E-51 T 13-10-2018 IPR012674 Calycin VEA_004510 41230fe5d542f0639da0c18970f2cb68 130 Gene3D G3DSA:3.30.230.10 1 130 8.9E-54 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VEA_004510 41230fe5d542f0639da0c18970f2cb68 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 6.8E-46 T 13-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 VEA_004510 41230fe5d542f0639da0c18970f2cb68 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 13-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 VEA_004510 41230fe5d542f0639da0c18970f2cb68 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.853 T 13-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid VEA_004510 41230fe5d542f0639da0c18970f2cb68 130 SUPERFAMILY SSF54211 5 130 2.77E-48 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEA_002532 7314938e727cbf4b2593009ef4de2962 172 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 154 6.8E-62 T 13-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VEA_002532 7314938e727cbf4b2593009ef4de2962 172 Gene3D G3DSA:3.30.1360.80 1 172 4.0E-74 T 13-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VEA_002532 7314938e727cbf4b2593009ef4de2962 172 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 148 6.0E-79 T 13-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VEA_002532 7314938e727cbf4b2593009ef4de2962 172 SUPERFAMILY SSF63411 4 162 5.04E-67 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VEA_002532 7314938e727cbf4b2593009ef4de2962 172 PIRSF PIRSF006160 1 162 1.4E-67 T 13-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VEA_002532 7314938e727cbf4b2593009ef4de2962 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 6.2E-52 T 13-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VEA_002532 7314938e727cbf4b2593009ef4de2962 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 6.2E-52 T 13-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VEA_002532 7314938e727cbf4b2593009ef4de2962 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 6.2E-52 T 13-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VEA_002532 7314938e727cbf4b2593009ef4de2962 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 6.2E-52 T 13-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VEA_002532 7314938e727cbf4b2593009ef4de2962 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 6.2E-52 T 13-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VEA_002532 7314938e727cbf4b2593009ef4de2962 172 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 35.616 T 13-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VEA_003083 55d37134cfbbac0e4fe7a405211c47e3 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 38.088 T 13-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VEA_003083 55d37134cfbbac0e4fe7a405211c47e3 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 13-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VEA_003083 55d37134cfbbac0e4fe7a405211c47e3 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 1.7E-101 T 13-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VEA_003083 55d37134cfbbac0e4fe7a405211c47e3 268 Gene3D G3DSA:3.20.20.70 1 268 1.2E-94 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_003083 55d37134cfbbac0e4fe7a405211c47e3 268 SUPERFAMILY SSF51366 1 266 5.84E-92 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VEA_003083 55d37134cfbbac0e4fe7a405211c47e3 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 4.0E-100 T 13-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VEA_002669 599e952308c8c4ae6fbf63eeb847ab9a 198 SUPERFAMILY SSF56925 21 198 3.14E-17 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VEA_002669 599e952308c8c4ae6fbf63eeb847ab9a 198 Gene3D G3DSA:2.40.160.20 20 198 1.4E-13 T 13-10-2018 VEA_002669 599e952308c8c4ae6fbf63eeb847ab9a 198 Pfam PF13505 Outer membrane protein beta-barrel domain 7 198 6.4E-20 T 13-10-2018 IPR027385 Outer membrane protein beta-barrel VEA_002747 e5fea8e2067394dcda803a09a805dfc2 281 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 13-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VEA_002747 e5fea8e2067394dcda803a09a805dfc2 281 SUPERFAMILY SSF54713 56 138 9.59E-19 T 13-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 VEA_002747 e5fea8e2067394dcda803a09a805dfc2 281 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 13-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VEA_002747 e5fea8e2067394dcda803a09a805dfc2 281 Gene3D G3DSA:3.30.479.20 57 140 9.3E-27 T 13-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 VEA_002747 e5fea8e2067394dcda803a09a805dfc2 281 Gene3D G3DSA:1.10.286.20 185 224 2.4E-22 T 13-10-2018 VEA_002747 e5fea8e2067394dcda803a09a805dfc2 281 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 280 7.0E-104 T 13-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VEA_002747 e5fea8e2067394dcda803a09a805dfc2 281 SUPERFAMILY SSF46934 4 54 1.63E-17 T 13-10-2018 IPR009060 UBA-like superfamily GO:0005515 VEA_002747 e5fea8e2067394dcda803a09a805dfc2 281 Gene3D G3DSA:1.10.8.10 1 56 2.0E-25 T 13-10-2018 VEA_002747 e5fea8e2067394dcda803a09a805dfc2 281 Pfam PF00889 Elongation factor TS 71 261 1.2E-61 T 13-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 VEA_002747 e5fea8e2067394dcda803a09a805dfc2 281 Hamap MF_00050 Elongation factor Ts [tsf]. 1 280 77.533 T 13-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VEA_002747 e5fea8e2067394dcda803a09a805dfc2 281 SUPERFAMILY SSF54713 142 280 1.7E-46 T 13-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 VEA_003713 070ac683e597a207494e9cfb26acddbf 117 SUPERFAMILY SSF74731 2 116 5.62E-50 T 13-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_003713 070ac683e597a207494e9cfb26acddbf 117 Gene3D G3DSA:1.10.1900.20 56 117 1.0E-28 T 13-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_003713 070ac683e597a207494e9cfb26acddbf 117 Gene3D G3DSA:1.10.720.90 2 55 1.1E-24 T 13-10-2018 VEA_003713 070ac683e597a207494e9cfb26acddbf 117 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.596 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_003713 070ac683e597a207494e9cfb26acddbf 117 Pfam PF00453 Ribosomal protein L20 3 108 9.9E-49 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_003713 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 42 71 4.8E-42 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_003713 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 12 41 4.8E-42 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_003713 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 75 101 4.8E-42 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_003713 070ac683e597a207494e9cfb26acddbf 117 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 2.5E-52 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_003713 070ac683e597a207494e9cfb26acddbf 117 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_003713 070ac683e597a207494e9cfb26acddbf 117 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 2.0E-22 T 13-10-2018 VEA_004399 4d4b061510e83d4ca7e65801bbc49590 177 Gene3D G3DSA:3.90.950.10 1 176 3.4E-70 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VEA_004399 4d4b061510e83d4ca7e65801bbc49590 177 Pfam PF01931 Protein of unknown function DUF84 9 167 3.6E-59 T 13-10-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 VEA_004399 4d4b061510e83d4ca7e65801bbc49590 177 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 8 171 1.0E-46 T 13-10-2018 IPR002786 Non-canonical purine NTP phosphatase VEA_004399 4d4b061510e83d4ca7e65801bbc49590 177 SUPERFAMILY SSF52972 4 173 1.61E-60 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VEA_004399 4d4b061510e83d4ca7e65801bbc49590 177 Hamap MF_00648 Non-canonical purine NTP phosphatase. 4 173 30.202 T 13-10-2018 IPR002786 Non-canonical purine NTP phosphatase VEA_000129 5b94bdfa062182efa00ab1a11084ba0b 220 Gene3D G3DSA:1.10.10.10 125 220 1.1E-30 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000129 5b94bdfa062182efa00ab1a11084ba0b 220 Gene3D G3DSA:3.40.50.2300 1 120 7.7E-29 T 13-10-2018 VEA_000129 5b94bdfa062182efa00ab1a11084ba0b 220 SMART SM00448 3 111 1.8E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_000129 5b94bdfa062182efa00ab1a11084ba0b 220 SUPERFAMILY SSF52172 4 118 1.14E-27 T 13-10-2018 IPR011006 CheY-like superfamily VEA_000129 5b94bdfa062182efa00ab1a11084ba0b 220 SMART SM00862 147 218 1.4E-26 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEA_000129 5b94bdfa062182efa00ab1a11084ba0b 220 SUPERFAMILY SSF46894 124 218 2.31E-29 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEA_000129 5b94bdfa062182efa00ab1a11084ba0b 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 218 1.6E-23 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEA_000129 5b94bdfa062182efa00ab1a11084ba0b 220 Pfam PF00072 Response regulator receiver domain 6 112 5.7E-17 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_003649 87fd4cc12ed64387584a4b8b8530c6a5 69 Pfam PF03692 Putative zinc- or iron-chelating domain 20 57 4.4E-8 T 13-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein VEA_002885 4ffb7169cba007645555b31075e04818 701 SUPERFAMILY SSF52540 32 222 1.09E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002885 4ffb7169cba007645555b31075e04818 701 Gene3D G3DSA:1.20.272.10 242 361 1.5E-39 T 13-10-2018 VEA_002885 4ffb7169cba007645555b31075e04818 701 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 481 558 4.7E-22 T 13-10-2018 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_002885 4ffb7169cba007645555b31075e04818 701 SMART SM00382 37 179 9.1E-5 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_002885 4ffb7169cba007645555b31075e04818 701 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 9.2E-133 T 13-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 VEA_002885 4ffb7169cba007645555b31075e04818 701 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 560 698 7.7E-50 T 13-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_002885 4ffb7169cba007645555b31075e04818 701 Gene3D G3DSA:3.30.300.150 558 683 5.4E-41 T 13-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_002885 4ffb7169cba007645555b31075e04818 701 SUPERFAMILY SSF48019 243 361 6.89E-33 T 13-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 VEA_002885 4ffb7169cba007645555b31075e04818 701 Pfam PF13177 DNA polymerase III, delta subunit 20 178 7.6E-44 T 13-10-2018 VEA_002885 4ffb7169cba007645555b31075e04818 701 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 358 3.0E-32 T 13-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 VEA_002885 4ffb7169cba007645555b31075e04818 701 Gene3D G3DSA:3.40.50.300 13 177 1.6E-101 T 13-10-2018 VEA_002885 4ffb7169cba007645555b31075e04818 701 Gene3D G3DSA:1.10.8.60 8 240 1.6E-101 T 13-10-2018 VEA_002361 b43e2209f61b6ca3026a326fb608c5d3 290 SUPERFAMILY SSF53448 2 271 4.17E-65 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEA_002361 b43e2209f61b6ca3026a326fb608c5d3 290 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 263 2.2E-125 T 13-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 VEA_002361 b43e2209f61b6ca3026a326fb608c5d3 290 Pfam PF00483 Nucleotidyl transferase 9 265 9.2E-33 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 VEA_002361 b43e2209f61b6ca3026a326fb608c5d3 290 Gene3D G3DSA:3.90.550.10 1 278 7.2E-83 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEA_002139 af74dd331b7fb0f0bf68cc49cadce912 224 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_002139 af74dd331b7fb0f0bf68cc49cadce912 224 Gene3D G3DSA:3.40.50.300 1 223 1.5E-61 T 13-10-2018 VEA_002139 af74dd331b7fb0f0bf68cc49cadce912 224 SMART SM00382 27 215 5.1E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_002139 af74dd331b7fb0f0bf68cc49cadce912 224 SUPERFAMILY SSF52540 1 220 3.69E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002139 af74dd331b7fb0f0bf68cc49cadce912 224 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 5.8E-90 T 13-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 VEA_002139 af74dd331b7fb0f0bf68cc49cadce912 224 Pfam PF00005 ABC transporter 18 165 2.4E-36 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_001689 c37730e0b97c5cc24d790216342c464a 338 SUPERFAMILY SSF56655 3 331 1.69E-114 T 13-10-2018 VEA_001689 c37730e0b97c5cc24d790216342c464a 338 PIRSF PIRSF000904 2 337 2.6E-126 T 13-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VEA_001689 c37730e0b97c5cc24d790216342c464a 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 151 174 3.3E-75 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VEA_001689 c37730e0b97c5cc24d790216342c464a 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 182 205 3.3E-75 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VEA_001689 c37730e0b97c5cc24d790216342c464a 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 307 332 3.3E-75 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VEA_001689 c37730e0b97c5cc24d790216342c464a 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 208 235 3.3E-75 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VEA_001689 c37730e0b97c5cc24d790216342c464a 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 30 57 3.3E-75 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VEA_001689 c37730e0b97c5cc24d790216342c464a 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 67 93 3.3E-75 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VEA_001689 c37730e0b97c5cc24d790216342c464a 338 Gene3D G3DSA:3.30.540.10 4 198 1.0E-76 T 13-10-2018 VEA_001689 c37730e0b97c5cc24d790216342c464a 338 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 6 197 1.6E-75 T 13-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VEA_001689 c37730e0b97c5cc24d790216342c464a 338 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 273 285 - T 13-10-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VEA_001689 c37730e0b97c5cc24d790216342c464a 338 Gene3D G3DSA:3.40.190.80 200 336 1.2E-60 T 13-10-2018 VEA_001689 c37730e0b97c5cc24d790216342c464a 338 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 5 333 43.127 T 13-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VEA_001689 c37730e0b97c5cc24d790216342c464a 338 PIRSF PIRSF500210 1 336 3.8E-129 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VEA_002106 8717bd2fa9eeaabc9314c4b58b4b0ade 312 SUPERFAMILY SSF54782 221 310 8.89E-28 T 13-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VEA_002106 8717bd2fa9eeaabc9314c4b58b4b0ade 312 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 228 296 1.4E-19 T 13-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VEA_002106 8717bd2fa9eeaabc9314c4b58b4b0ade 312 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 7 213 3.1E-79 T 13-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VEA_002106 8717bd2fa9eeaabc9314c4b58b4b0ade 312 Gene3D G3DSA:3.30.160.40 222 307 2.8E-27 T 13-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VEA_002106 8717bd2fa9eeaabc9314c4b58b4b0ade 312 SUPERFAMILY SSF53850 6 220 1.95E-85 T 13-10-2018 VEA_002106 8717bd2fa9eeaabc9314c4b58b4b0ade 312 Gene3D G3DSA:3.40.190.10 104 203 1.6E-84 T 13-10-2018 VEA_002106 8717bd2fa9eeaabc9314c4b58b4b0ade 312 Gene3D G3DSA:3.40.190.10 7 211 1.6E-84 T 13-10-2018 VEA_002106 8717bd2fa9eeaabc9314c4b58b4b0ade 312 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 6 298 40.096 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VEA_002106 8717bd2fa9eeaabc9314c4b58b4b0ade 312 PRINTS PR00151 Porphobilinogen deaminase signature 46 66 2.3E-47 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VEA_002106 8717bd2fa9eeaabc9314c4b58b4b0ade 312 PRINTS PR00151 Porphobilinogen deaminase signature 125 142 2.3E-47 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VEA_002106 8717bd2fa9eeaabc9314c4b58b4b0ade 312 PRINTS PR00151 Porphobilinogen deaminase signature 144 161 2.3E-47 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VEA_002106 8717bd2fa9eeaabc9314c4b58b4b0ade 312 PRINTS PR00151 Porphobilinogen deaminase signature 77 96 2.3E-47 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VEA_002106 8717bd2fa9eeaabc9314c4b58b4b0ade 312 PRINTS PR00151 Porphobilinogen deaminase signature 231 248 2.3E-47 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VEA_002106 8717bd2fa9eeaabc9314c4b58b4b0ade 312 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 7 298 2.8E-114 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VEA_002106 8717bd2fa9eeaabc9314c4b58b4b0ade 312 PIRSF PIRSF001438 1 312 1.1E-121 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VEA_002106 8717bd2fa9eeaabc9314c4b58b4b0ade 312 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 232 248 - T 13-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VEA_004347 58334525d6319cfae686ed791408fb9d 204 Gene3D G3DSA:1.25.40.10 7 203 2.9E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_004347 58334525d6319cfae686ed791408fb9d 204 PIRSF PIRSF006170 1 204 3.7E-52 T 13-10-2018 IPR026039 Uncharacterised protein family UPF0070 VEA_004347 58334525d6319cfae686ed791408fb9d 204 Pfam PF09976 Tetratricopeptide repeat-like domain 15 204 1.3E-54 T 13-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 VEA_002671 b0e99a29be7ffe3091efd35df9e571e9 394 Pfam PF05940 NnrS protein 16 388 1.8E-108 T 13-10-2018 IPR010266 NnrS VEA_001094 1cde73b783005fe74fdec4f1d4c0564b 62 Gene3D G3DSA:2.10.260.10 6 49 1.2E-6 T 13-10-2018 VEA_001094 1cde73b783005fe74fdec4f1d4c0564b 62 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 6 45 2.5E-7 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 VEA_001094 1cde73b783005fe74fdec4f1d4c0564b 62 SMART SM00966 6 49 2.5E-4 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 VEA_001094 1cde73b783005fe74fdec4f1d4c0564b 62 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 6 45 2.6E-7 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 VEA_001094 1cde73b783005fe74fdec4f1d4c0564b 62 SUPERFAMILY SSF89447 1 48 2.27E-9 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily VEA_002826 4f359ae3cd54c3e1ece7c8c57fa93c09 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 1.4E-28 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VEA_002826 4f359ae3cd54c3e1ece7c8c57fa93c09 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 4.1E-17 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VEA_002826 4f359ae3cd54c3e1ece7c8c57fa93c09 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 4.1E-17 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VEA_002826 4f359ae3cd54c3e1ece7c8c57fa93c09 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 4.1E-17 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VEA_002826 4f359ae3cd54c3e1ece7c8c57fa93c09 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 3.2E-33 T 13-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 VEA_002826 4f359ae3cd54c3e1ece7c8c57fa93c09 89 PIRSF PIRSF004669 1 89 9.9E-31 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VEA_001528 92b28440b3d1f86259d659c592a968f0 437 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 21 141 1.8E-6 T 13-10-2018 IPR000014 PAS domain VEA_001528 92b28440b3d1f86259d659c592a968f0 437 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 141 264 2.2E-17 T 13-10-2018 IPR000014 PAS domain VEA_001528 92b28440b3d1f86259d659c592a968f0 437 Pfam PF08447 PAS fold 166 251 2.3E-14 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 VEA_001528 92b28440b3d1f86259d659c592a968f0 437 SMART SM00091 141 211 0.033 T 13-10-2018 IPR000014 PAS domain VEA_001528 92b28440b3d1f86259d659c592a968f0 437 SMART SM00091 19 88 0.51 T 13-10-2018 IPR000014 PAS domain VEA_001528 92b28440b3d1f86259d659c592a968f0 437 SUPERFAMILY SSF55785 7 129 4.54E-11 T 13-10-2018 IPR035965 PAS domain superfamily VEA_001528 92b28440b3d1f86259d659c592a968f0 437 Gene3D G3DSA:1.10.287.950 249 437 4.2E-49 T 13-10-2018 VEA_001528 92b28440b3d1f86259d659c592a968f0 437 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 285 435 1.2E-34 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_001528 92b28440b3d1f86259d659c592a968f0 437 Gene3D G3DSA:3.30.450.20 18 132 3.4E-10 T 13-10-2018 VEA_001528 92b28440b3d1f86259d659c592a968f0 437 SMART SM00086 94 136 28.0 T 13-10-2018 IPR001610 PAC motif VEA_001528 92b28440b3d1f86259d659c592a968f0 437 SMART SM00086 216 258 0.0011 T 13-10-2018 IPR001610 PAC motif VEA_001528 92b28440b3d1f86259d659c592a968f0 437 SUPERFAMILY SSF55785 131 256 6.88E-20 T 13-10-2018 IPR035965 PAS domain superfamily VEA_001528 92b28440b3d1f86259d659c592a968f0 437 Pfam PF13426 PAS domain 37 132 5.2E-8 T 13-10-2018 IPR000014 PAS domain VEA_001528 92b28440b3d1f86259d659c592a968f0 437 SUPERFAMILY SSF58104 178 434 7.72E-53 T 13-10-2018 VEA_001528 92b28440b3d1f86259d659c592a968f0 437 SMART SM00283 230 434 1.1E-19 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_001528 92b28440b3d1f86259d659c592a968f0 437 Gene3D G3DSA:3.30.450.20 133 248 1.3E-20 T 13-10-2018 VEA_001441 932c8ed24c85148642f0cb7a16648e25 275 SUPERFAMILY SSF51215 31 156 2.09E-18 T 13-10-2018 IPR037923 Transcription regulator HTH-like VEA_001441 932c8ed24c85148642f0cb7a16648e25 275 SUPERFAMILY SSF46689 174 224 2.02E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_001441 932c8ed24c85148642f0cb7a16648e25 275 Gene3D G3DSA:1.10.10.60 170 232 2.9E-16 T 13-10-2018 VEA_001441 932c8ed24c85148642f0cb7a16648e25 275 Pfam PF02311 AraC-like ligand binding domain 18 150 5.2E-26 T 13-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VEA_001441 932c8ed24c85148642f0cb7a16648e25 275 Pfam PF12833 Helix-turn-helix domain 196 273 1.8E-21 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_001441 932c8ed24c85148642f0cb7a16648e25 275 Gene3D G3DSA:1.10.10.60 233 275 2.7E-15 T 13-10-2018 VEA_001441 932c8ed24c85148642f0cb7a16648e25 275 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 227 268 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VEA_001441 932c8ed24c85148642f0cb7a16648e25 275 SUPERFAMILY SSF46689 227 273 2.11E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_001441 932c8ed24c85148642f0cb7a16648e25 275 SMART SM00342 190 272 1.6E-30 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_003630 69e8803da393fe2c259e14b8a552b0a0 475 PIRSF PIRSF006060 7 472 6.4E-57 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VEA_003630 69e8803da393fe2c259e14b8a552b0a0 475 Gene3D G3DSA:1.20.1740.10 8 473 2.7E-42 T 13-10-2018 VEA_003630 69e8803da393fe2c259e14b8a552b0a0 475 Pfam PF13520 Amino acid permease 11 447 6.5E-55 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VEA_002041 fcf5aacaf678a89241d68a71c9240196 421 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 248 396 8.5E-49 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VEA_002041 fcf5aacaf678a89241d68a71c9240196 421 SUPERFAMILY SSF52518 231 419 1.07E-65 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VEA_002041 fcf5aacaf678a89241d68a71c9240196 421 Gene3D G3DSA:3.40.50.1220 53 222 7.6E-53 T 13-10-2018 VEA_002041 fcf5aacaf678a89241d68a71c9240196 421 SUPERFAMILY SSF52518 1 49 1.55E-8 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VEA_002041 fcf5aacaf678a89241d68a71c9240196 421 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 41 2.6E-6 T 13-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VEA_002041 fcf5aacaf678a89241d68a71c9240196 421 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 60 195 1.0E-40 T 13-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 VEA_002041 fcf5aacaf678a89241d68a71c9240196 421 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 285 304 - T 13-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 VEA_002041 fcf5aacaf678a89241d68a71c9240196 421 Gene3D G3DSA:3.40.50.970 1 44 4.5E-8 T 13-10-2018 VEA_002041 fcf5aacaf678a89241d68a71c9240196 421 SUPERFAMILY SSF52467 55 214 4.91E-56 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VEA_002041 fcf5aacaf678a89241d68a71c9240196 421 Gene3D G3DSA:3.40.50.970 223 421 1.3E-66 T 13-10-2018 VEA_003774 72b06755f66c398622ae5ae0d315a3ed 194 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 8 181 8.3E-57 T 13-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal VEA_003774 72b06755f66c398622ae5ae0d315a3ed 194 SUPERFAMILY SSF48695 19 181 6.45E-32 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily VEA_003774 72b06755f66c398622ae5ae0d315a3ed 194 Gene3D G3DSA:1.10.3820.10 7 189 1.0E-34 T 13-10-2018 IPR038266 NapC/NirT cytochrome c superfamily VEA_003774 72b06755f66c398622ae5ae0d315a3ed 194 PIRSF PIRSF000013 1 194 4.0E-80 T 13-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 VEA_000749 9cebbf481d13702d3ff35e5c2b5c71c4 456 Pfam PF03315 Serine dehydratase beta chain 3 153 1.6E-52 T 13-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 VEA_000749 9cebbf481d13702d3ff35e5c2b5c71c4 456 Gene3D G3DSA:3.30.1330.90 10 157 5.9E-50 T 13-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 VEA_000749 9cebbf481d13702d3ff35e5c2b5c71c4 456 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 448 1.4E-198 T 13-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 VEA_000749 9cebbf481d13702d3ff35e5c2b5c71c4 456 SUPERFAMILY SSF143548 16 155 5.49E-44 T 13-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 VEA_000749 9cebbf481d13702d3ff35e5c2b5c71c4 456 Pfam PF03313 Serine dehydratase alpha chain 190 447 1.9E-94 T 13-10-2018 IPR005130 Serine dehydratase-like, alpha subunit VEA_002159 17801685d5b4507a76b81be641c9bf36 58 SUPERFAMILY SSF54928 1 49 1.26E-10 T 13-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 VEA_002159 17801685d5b4507a76b81be641c9bf36 58 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 1 40 2.4E-5 T 13-10-2018 IPR000504 RNA recognition motif domain GO:0003676 VEA_002159 17801685d5b4507a76b81be641c9bf36 58 Gene3D G3DSA:3.30.70.330 1 51 8.6E-11 T 13-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VEA_001563 3cc0a9ec3b8cd0946ff73e4227550f2e 486 SUPERFAMILY SSF53720 5 484 5.37E-149 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VEA_001563 3cc0a9ec3b8cd0946ff73e4227550f2e 486 Gene3D G3DSA:3.40.605.10 19 476 1.8E-148 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VEA_001563 3cc0a9ec3b8cd0946ff73e4227550f2e 486 Gene3D G3DSA:3.40.309.10 260 452 1.8E-148 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VEA_001563 3cc0a9ec3b8cd0946ff73e4227550f2e 486 Pfam PF00171 Aldehyde dehydrogenase family 24 480 7.5E-150 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VEA_004112 a0ba9e420dadaa7167706a39f2e2fc04 941 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 933 0.0 T 13-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VEA_004112 a0ba9e420dadaa7167706a39f2e2fc04 941 Gene3D G3DSA:3.40.50.12470 557 803 1.9E-172 T 13-10-2018 VEA_004112 a0ba9e420dadaa7167706a39f2e2fc04 941 Gene3D G3DSA:1.10.287.1150 85 167 2.1E-30 T 13-10-2018 VEA_004112 a0ba9e420dadaa7167706a39f2e2fc04 941 Gene3D G3DSA:3.40.50.970 168 534 1.6E-147 T 13-10-2018 VEA_004112 a0ba9e420dadaa7167706a39f2e2fc04 941 Pfam PF00676 Dehydrogenase E1 component 221 514 7.4E-49 T 13-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 VEA_004112 a0ba9e420dadaa7167706a39f2e2fc04 941 SUPERFAMILY SSF52518 577 793 2.69E-53 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VEA_004112 a0ba9e420dadaa7167706a39f2e2fc04 941 SMART SM00861 594 787 2.0E-64 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VEA_004112 a0ba9e420dadaa7167706a39f2e2fc04 941 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 792 933 9.3E-55 T 13-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VEA_004112 a0ba9e420dadaa7167706a39f2e2fc04 941 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 50 1.1E-13 T 13-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VEA_004112 a0ba9e420dadaa7167706a39f2e2fc04 941 SUPERFAMILY SSF52518 122 532 2.94E-88 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VEA_004112 a0ba9e420dadaa7167706a39f2e2fc04 941 PIRSF PIRSF000157 1 935 0.0 T 13-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VEA_004112 a0ba9e420dadaa7167706a39f2e2fc04 941 Pfam PF02779 Transketolase, pyrimidine binding domain 593 788 2.0E-66 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VEA_004112 a0ba9e420dadaa7167706a39f2e2fc04 941 Gene3D G3DSA:3.40.50.11610 724 930 1.9E-172 T 13-10-2018 VEA_002791 82936f8438fbadbb397f4cdb42f38f2f 156 Gene3D G3DSA:3.40.30.10 3 155 3.4E-46 T 13-10-2018 VEA_002791 82936f8438fbadbb397f4cdb42f38f2f 156 PIRSF PIRSF000239 1 147 2.2E-17 T 13-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VEA_002791 82936f8438fbadbb397f4cdb42f38f2f 156 Pfam PF00578 AhpC/TSA family 7 134 2.7E-35 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VEA_002791 82936f8438fbadbb397f4cdb42f38f2f 156 SUPERFAMILY SSF52833 4 154 7.37E-48 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VEA_000473 6e11bba62cb030e0635be9686cbc7bdb 145 Gene3D G3DSA:3.30.450.20 6 140 2.0E-31 T 13-10-2018 VEA_000473 6e11bba62cb030e0635be9686cbc7bdb 145 SUPERFAMILY SSF55785 10 127 8.72E-12 T 13-10-2018 IPR035965 PAS domain superfamily VEA_000473 6e11bba62cb030e0635be9686cbc7bdb 145 Pfam PF00989 PAS fold 16 134 1.6E-6 T 13-10-2018 IPR013767 PAS fold GO:0006355 VEA_000515 a21a26f8a7338876887a0dec4399febd 170 SUPERFAMILY SSF48695 4 169 6.24E-54 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily VEA_000515 a21a26f8a7338876887a0dec4399febd 170 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 2 163 6.8E-68 T 13-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal VEA_000515 a21a26f8a7338876887a0dec4399febd 170 PIRSF PIRSF000013 1 170 1.5E-84 T 13-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 VEA_000515 a21a26f8a7338876887a0dec4399febd 170 Gene3D G3DSA:1.10.3820.10 1 166 3.7E-32 T 13-10-2018 IPR038266 NapC/NirT cytochrome c superfamily VEA_002593 1e55818912cddf72ec32c0dc29925d22 372 Gene3D G3DSA:1.10.287.470 115 174 6.6E-53 T 13-10-2018 VEA_002593 1e55818912cddf72ec32c0dc29925d22 372 SUPERFAMILY SSF111369 69 284 2.35E-32 T 13-10-2018 VEA_002593 1e55818912cddf72ec32c0dc29925d22 372 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 279 1.8E-24 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VEA_002593 1e55818912cddf72ec32c0dc29925d22 372 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 64 357 2.2E-50 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VEA_002593 1e55818912cddf72ec32c0dc29925d22 372 Gene3D G3DSA:2.40.50.100 80 208 6.6E-53 T 13-10-2018 VEA_002593 1e55818912cddf72ec32c0dc29925d22 372 Gene3D G3DSA:2.40.420.20 289 356 6.6E-53 T 13-10-2018 VEA_002593 1e55818912cddf72ec32c0dc29925d22 372 Gene3D G3DSA:2.40.30.170 68 288 6.6E-53 T 13-10-2018 VEA_000899 d5d9984f568ca79c227abe2bbee5a185 414 SUPERFAMILY SSF56281 134 390 5.19E-31 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEA_000899 d5d9984f568ca79c227abe2bbee5a185 414 Pfam PF12706 Beta-lactamase superfamily domain 152 352 8.5E-40 T 13-10-2018 IPR001279 Metallo-beta-lactamase VEA_000899 d5d9984f568ca79c227abe2bbee5a185 414 Gene3D G3DSA:3.60.15.10 117 409 2.5E-72 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEA_002828 1674a86d6a864317c7762c17a81b69e2 376 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 2.5E-120 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VEA_002828 1674a86d6a864317c7762c17a81b69e2 376 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 353 1.8E-133 T 13-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 VEA_002828 1674a86d6a864317c7762c17a81b69e2 376 Gene3D G3DSA:3.40.1690.10 218 359 2.4E-57 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal VEA_002828 1674a86d6a864317c7762c17a81b69e2 376 SUPERFAMILY SSF160544 250 355 1.05E-39 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal VEA_002828 1674a86d6a864317c7762c17a81b69e2 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 7.1E-40 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VEA_002828 1674a86d6a864317c7762c17a81b69e2 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 7.1E-40 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VEA_002828 1674a86d6a864317c7762c17a81b69e2 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 7.1E-40 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VEA_002828 1674a86d6a864317c7762c17a81b69e2 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 7.1E-40 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VEA_002828 1674a86d6a864317c7762c17a81b69e2 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 7.1E-40 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VEA_002319 71df3d1c7bb484ebe11e02b8e003ed46 242 Gene3D G3DSA:3.40.30.10 4 165 1.4E-63 T 13-10-2018 VEA_002319 71df3d1c7bb484ebe11e02b8e003ed46 242 Pfam PF00462 Glutaredoxin 173 231 1.8E-18 T 13-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VEA_002319 71df3d1c7bb484ebe11e02b8e003ed46 242 Pfam PF08534 Redoxin 5 160 2.7E-33 T 13-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 VEA_002319 71df3d1c7bb484ebe11e02b8e003ed46 242 Gene3D G3DSA:3.40.30.10 171 242 5.3E-23 T 13-10-2018 VEA_002319 71df3d1c7bb484ebe11e02b8e003ed46 242 SUPERFAMILY SSF52833 3 241 1.44E-48 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VEA_002319 71df3d1c7bb484ebe11e02b8e003ed46 242 PRINTS PR00160 Glutaredoxin signature 173 191 3.6E-14 T 13-10-2018 IPR014025 Glutaredoxin subgroup VEA_002319 71df3d1c7bb484ebe11e02b8e003ed46 242 PRINTS PR00160 Glutaredoxin signature 228 241 3.6E-14 T 13-10-2018 IPR014025 Glutaredoxin subgroup VEA_002319 71df3d1c7bb484ebe11e02b8e003ed46 242 PRINTS PR00160 Glutaredoxin signature 214 227 3.6E-14 T 13-10-2018 IPR014025 Glutaredoxin subgroup VEA_002319 71df3d1c7bb484ebe11e02b8e003ed46 242 ProSitePatterns PS00195 Glutaredoxin active site. 175 191 - T 13-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 VEA_002319 71df3d1c7bb484ebe11e02b8e003ed46 242 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 164 242 3.2E-42 T 13-10-2018 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 VEA_002479 3245397f281cf9c06e35cea5f2bd8e2b 410 SUPERFAMILY SSF52283 7 136 1.38E-49 T 13-10-2018 VEA_002479 3245397f281cf9c06e35cea5f2bd8e2b 410 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 13-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 VEA_002479 3245397f281cf9c06e35cea5f2bd8e2b 410 Gene3D G3DSA:3.30.70.260 328 409 3.4E-32 T 13-10-2018 VEA_002479 3245397f281cf9c06e35cea5f2bd8e2b 410 Gene3D G3DSA:3.40.50.720 14 312 1.2E-110 T 13-10-2018 VEA_002479 3245397f281cf9c06e35cea5f2bd8e2b 410 SUPERFAMILY SSF55021 337 409 8.02E-18 T 13-10-2018 VEA_002479 3245397f281cf9c06e35cea5f2bd8e2b 410 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 326 3.7E-39 T 13-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VEA_002479 3245397f281cf9c06e35cea5f2bd8e2b 410 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 2.8E-52 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VEA_002479 3245397f281cf9c06e35cea5f2bd8e2b 410 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VEA_002479 3245397f281cf9c06e35cea5f2bd8e2b 410 Gene3D G3DSA:3.40.50.720 109 297 1.2E-110 T 13-10-2018 VEA_002479 3245397f281cf9c06e35cea5f2bd8e2b 410 SUPERFAMILY SSF51735 108 295 4.78E-58 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_001958 72da84669bb6b0876c6f11bfc8b4c1c8 458 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 15 457 5.9E-107 T 13-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VEA_001958 72da84669bb6b0876c6f11bfc8b4c1c8 458 PIRSF PIRSF002746 9 458 8.1E-145 T 13-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VEA_001958 72da84669bb6b0876c6f11bfc8b4c1c8 458 Pfam PF02447 GntP family permease 14 456 1.9E-117 T 13-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VEA_004227 8dc98de8f7c735c8ea0a5c445564d924 220 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 70 85 - T 13-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 VEA_004227 8dc98de8f7c735c8ea0a5c445564d924 220 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 26 202 3.1E-72 T 13-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VEA_004227 8dc98de8f7c735c8ea0a5c445564d924 220 Gene3D G3DSA:3.30.930.10 1 203 1.2E-64 T 13-10-2018 VEA_004227 8dc98de8f7c735c8ea0a5c445564d924 220 SUPERFAMILY SSF55681 2 204 2.07E-71 T 13-10-2018 VEA_004227 8dc98de8f7c735c8ea0a5c445564d924 220 Pfam PF03099 Biotin/lipoate A/B protein ligase family 59 158 6.4E-8 T 13-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 VEA_004227 8dc98de8f7c735c8ea0a5c445564d924 220 PIRSF PIRSF016262 1 216 3.9E-64 T 13-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VEA_004227 8dc98de8f7c735c8ea0a5c445564d924 220 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 74 127 2.0E-25 T 13-10-2018 VEA_004227 8dc98de8f7c735c8ea0a5c445564d924 220 Hamap MF_00013 Octanoyltransferase [lipB]. 4 205 38.262 T 13-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VEA_004408 88b21ba3952f2fafb27719bc638f137c 370 SUPERFAMILY SSF53067 6 342 2.04E-27 T 13-10-2018 VEA_004408 88b21ba3952f2fafb27719bc638f137c 370 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 5 369 41.315 T 13-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 VEA_004408 88b21ba3952f2fafb27719bc638f137c 370 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 6 368 3.1E-166 T 13-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 VEA_004408 88b21ba3952f2fafb27719bc638f137c 370 Gene3D G3DSA:3.30.420.40 12 364 6.5E-131 T 13-10-2018 VEA_004408 88b21ba3952f2fafb27719bc638f137c 370 Gene3D G3DSA:3.30.420.40 146 329 6.5E-131 T 13-10-2018 VEA_003607 9986cd831ae2f3d3c05abb57f5334ae8 248 SUPERFAMILY SSF53098 51 238 4.4E-39 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VEA_003607 9986cd831ae2f3d3c05abb57f5334ae8 248 SMART SM00479 57 238 1.2E-25 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VEA_003607 9986cd831ae2f3d3c05abb57f5334ae8 248 Gene3D G3DSA:3.30.420.10 52 240 8.9E-35 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VEA_003607 9986cd831ae2f3d3c05abb57f5334ae8 248 Pfam PF00929 Exonuclease 59 229 2.4E-16 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VEA_003607 9986cd831ae2f3d3c05abb57f5334ae8 248 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 53 238 5.2E-21 T 13-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_003796 7137704e20ff537e516c663d1db87540 203 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VEA_003796 7137704e20ff537e516c663d1db87540 203 Gene3D G3DSA:1.20.120.1760 3 199 2.1E-20 T 13-10-2018 VEA_003796 7137704e20ff537e516c663d1db87540 203 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 89 3.4E-9 T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VEA_000661 fb8536588d7755de4fd4910d1e122564 355 Pfam PF13343 Bacterial extracellular solute-binding protein 92 316 5.8E-34 T 13-10-2018 VEA_000661 fb8536588d7755de4fd4910d1e122564 355 Gene3D G3DSA:3.40.190.10 67 318 1.2E-35 T 13-10-2018 VEA_000661 fb8536588d7755de4fd4910d1e122564 355 SUPERFAMILY SSF53850 49 348 3.03E-47 T 13-10-2018 VEA_000661 fb8536588d7755de4fd4910d1e122564 355 Gene3D G3DSA:3.40.190.10 141 323 1.2E-35 T 13-10-2018 VEA_001896 3391167e118cf5defb7bd380bc3b3a45 542 Gene3D G3DSA:3.40.449.10 25 235 9.3E-238 T 13-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 VEA_001896 3391167e118cf5defb7bd380bc3b3a45 542 PIRSF PIRSF006294 4 541 3.5E-228 T 13-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 VEA_001896 3391167e118cf5defb7bd380bc3b3a45 542 Gene3D G3DSA:3.90.228.20 236 526 9.3E-238 T 13-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 VEA_001896 3391167e118cf5defb7bd380bc3b3a45 542 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 18 539 55.326 T 13-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 VEA_001896 3391167e118cf5defb7bd380bc3b3a45 542 Gene3D G3DSA:2.170.8.10 49 351 9.3E-238 T 13-10-2018 VEA_001896 3391167e118cf5defb7bd380bc3b3a45 542 Pfam PF01293 Phosphoenolpyruvate carboxykinase 24 491 2.5E-212 T 13-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 VEA_001896 3391167e118cf5defb7bd380bc3b3a45 542 SUPERFAMILY SSF68923 11 228 2.09E-89 T 13-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 VEA_001896 3391167e118cf5defb7bd380bc3b3a45 542 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 11 541 1.6E-278 T 13-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 VEA_001896 3391167e118cf5defb7bd380bc3b3a45 542 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 266 281 - T 13-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 VEA_001896 3391167e118cf5defb7bd380bc3b3a45 542 SUPERFAMILY SSF53795 230 541 1.96E-128 T 13-10-2018 VEA_004012 c052c4b5c21a7f266ce90a37455bdfa2 100 Gene3D G3DSA:1.10.10.10 1 100 1.7E-39 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_004012 c052c4b5c21a7f266ce90a37455bdfa2 100 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 4 83 1.6E-24 T 13-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 VEA_004012 c052c4b5c21a7f266ce90a37455bdfa2 100 SUPERFAMILY SSF46767 2 84 6.93E-25 T 13-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 VEA_001654 95eda75f4385d66a1eb8ea31c5b417ce 265 Pfam PF08239 Bacterial SH3 domain 132 183 1.5E-12 T 13-10-2018 IPR003646 SH3-like domain, bacterial-type VEA_001654 95eda75f4385d66a1eb8ea31c5b417ce 265 Gene3D G3DSA:2.30.30.40 126 192 1.1E-10 T 13-10-2018 VEA_003428 211ea9c97963a18bdde6c12bca85a20b 554 ProSitePatterns PS00211 ABC transporters family signature. 452 466 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_003428 211ea9c97963a18bdde6c12bca85a20b 554 Gene3D G3DSA:3.40.50.300 308 553 8.9E-82 T 13-10-2018 VEA_003428 211ea9c97963a18bdde6c12bca85a20b 554 Gene3D G3DSA:1.20.1560.10 1 296 1.1E-46 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEA_003428 211ea9c97963a18bdde6c12bca85a20b 554 SUPERFAMILY SSF90123 29 301 3.79E-49 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEA_003428 211ea9c97963a18bdde6c12bca85a20b 554 Pfam PF00664 ABC transporter transmembrane region 38 268 4.1E-29 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VEA_003428 211ea9c97963a18bdde6c12bca85a20b 554 SMART SM00382 341 528 1.7E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_003428 211ea9c97963a18bdde6c12bca85a20b 554 SUPERFAMILY SSF52540 312 547 1.01E-80 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003428 211ea9c97963a18bdde6c12bca85a20b 554 Pfam PF00005 ABC transporter 332 480 6.5E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_004244 f01be31b9e22c74288ead78322d1163a 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 129 2.3E-49 T 13-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 VEA_004244 f01be31b9e22c74288ead78322d1163a 281 SUPERFAMILY SSF55620 184 267 4.22E-10 T 13-10-2018 VEA_004244 f01be31b9e22c74288ead78322d1163a 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 165.895 T 13-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 VEA_004244 f01be31b9e22c74288ead78322d1163a 281 PIRSF PIRSF004750 6 281 2.2E-131 T 13-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 VEA_004244 f01be31b9e22c74288ead78322d1163a 281 Gene3D G3DSA:3.30.1130.10 143 281 6.0E-63 T 13-10-2018 VEA_004244 f01be31b9e22c74288ead78322d1163a 281 TIGRFAM TIGR03138 QueF: queuine synthase 11 281 1.3E-129 T 13-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 VEA_004244 f01be31b9e22c74288ead78322d1163a 281 Pfam PF14489 QueF-like protein 194 270 5.6E-27 T 13-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 VEA_004244 f01be31b9e22c74288ead78322d1163a 281 Gene3D G3DSA:3.30.1130.10 21 138 1.5E-46 T 13-10-2018 VEA_003841 f3955e81e213b1dbdd276324d014d4ac 167 Pfam PF02810 SEC-C motif 4 18 3.2E-6 T 13-10-2018 IPR004027 SEC-C motif VEA_003841 f3955e81e213b1dbdd276324d014d4ac 167 Pfam PF02810 SEC-C motif 150 167 4.9E-10 T 13-10-2018 IPR004027 SEC-C motif VEA_003841 f3955e81e213b1dbdd276324d014d4ac 167 SUPERFAMILY SSF103642 147 167 4.58E-8 T 13-10-2018 VEA_003841 f3955e81e213b1dbdd276324d014d4ac 167 Gene3D G3DSA:3.10.450.50 1 167 6.1E-53 T 13-10-2018 VEA_003841 f3955e81e213b1dbdd276324d014d4ac 167 SUPERFAMILY SSF54427 28 128 1.05E-34 T 13-10-2018 IPR032710 NTF2-like domain superfamily VEA_003841 f3955e81e213b1dbdd276324d014d4ac 167 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 1 127 26.606 T 13-10-2018 IPR023006 Uncharacterised protein family UPF0225 VEA_004141 cd2845587a785ee7475edac126aadec4 92 SUPERFAMILY SSF52833 5 87 1.07E-28 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VEA_004141 cd2845587a785ee7475edac126aadec4 92 Pfam PF10262 Rdx family 6 78 4.3E-31 T 13-10-2018 IPR011893 Selenoprotein, Rdx-type VEA_004141 cd2845587a785ee7475edac126aadec4 92 Gene3D G3DSA:3.40.30.10 2 92 5.3E-39 T 13-10-2018 VEA_004141 cd2845587a785ee7475edac126aadec4 92 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 6 77 1.6E-24 T 13-10-2018 IPR011893 Selenoprotein, Rdx-type VEA_002925 51d4cd4b9e492b6a41c0e7fe36ce0b4d 438 SUPERFAMILY SSF47226 319 432 1.83E-18 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 VEA_002925 51d4cd4b9e492b6a41c0e7fe36ce0b4d 438 Pfam PF01627 Hpt domain 342 418 2.5E-10 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VEA_002925 51d4cd4b9e492b6a41c0e7fe36ce0b4d 438 Gene3D G3DSA:1.20.120.160 320 431 8.7E-20 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 VEA_000482 06eba95fd2b7f0c2e54bf4b73c0737c1 411 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 257 290 - T 13-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 VEA_000482 06eba95fd2b7f0c2e54bf4b73c0737c1 411 Pfam PF03454 MoeA C-terminal region (domain IV) 336 406 1.1E-21 T 13-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VEA_000482 06eba95fd2b7f0c2e54bf4b73c0737c1 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 180 317 2.6E-32 T 13-10-2018 IPR001453 MoaB/Mog domain VEA_000482 06eba95fd2b7f0c2e54bf4b73c0737c1 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 11 171 3.3E-47 T 13-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VEA_000482 06eba95fd2b7f0c2e54bf4b73c0737c1 411 SUPERFAMILY SSF63882 7 180 6.41E-57 T 13-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VEA_000482 06eba95fd2b7f0c2e54bf4b73c0737c1 411 SMART SM00852 184 321 7.1E-42 T 13-10-2018 IPR001453 MoaB/Mog domain VEA_000482 06eba95fd2b7f0c2e54bf4b73c0737c1 411 SUPERFAMILY SSF53218 181 327 1.09E-41 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily VEA_000482 06eba95fd2b7f0c2e54bf4b73c0737c1 411 Gene3D G3DSA:2.40.340.10 332 401 2.3E-145 T 13-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VEA_000482 06eba95fd2b7f0c2e54bf4b73c0737c1 411 Gene3D G3DSA:3.40.980.10 179 331 2.3E-145 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily VEA_000482 06eba95fd2b7f0c2e54bf4b73c0737c1 411 Pfam PF00994 Probable molybdopterin binding domain 186 320 2.7E-25 T 13-10-2018 IPR001453 MoaB/Mog domain VEA_000482 06eba95fd2b7f0c2e54bf4b73c0737c1 411 Gene3D G3DSA:3.90.105.10 31 178 2.3E-145 T 13-10-2018 VEA_000482 06eba95fd2b7f0c2e54bf4b73c0737c1 411 SUPERFAMILY SSF63867 332 410 5.36E-23 T 13-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VEA_000482 06eba95fd2b7f0c2e54bf4b73c0737c1 411 Gene3D G3DSA:2.170.190.11 53 145 2.3E-145 T 13-10-2018 VEA_003680 9aa5192fb05a94c34c9d260c5da69921 171 Pfam PF01863 Protein of unknown function DUF45 94 150 3.2E-10 T 13-10-2018 IPR002725 Protein of unknown function DUF45 VEA_003680 9aa5192fb05a94c34c9d260c5da69921 171 Gene3D G3DSA:3.30.2010.10 73 165 1.2E-5 T 13-10-2018 VEA_000463 da4efa08dc125567a37b3e9355c867d8 467 Pfam PF00155 Aminotransferase class I and II 146 436 6.2E-18 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VEA_000463 da4efa08dc125567a37b3e9355c867d8 467 SMART SM00345 17 76 6.7E-10 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_000463 da4efa08dc125567a37b3e9355c867d8 467 SUPERFAMILY SSF53383 95 466 4.76E-80 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_000463 da4efa08dc125567a37b3e9355c867d8 467 SUPERFAMILY SSF46785 13 78 1.04E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000463 da4efa08dc125567a37b3e9355c867d8 467 Gene3D G3DSA:3.40.640.10 103 460 9.4E-92 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_000463 da4efa08dc125567a37b3e9355c867d8 467 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 76 2.0E-12 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_000463 da4efa08dc125567a37b3e9355c867d8 467 Gene3D G3DSA:1.10.10.10 9 83 2.9E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000517 2a2630ab38fb9db6a123b41de0283cb2 591 SUPERFAMILY SSF53474 225 527 5.35E-35 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_000517 2a2630ab38fb9db6a123b41de0283cb2 591 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 95 266 7.1E-74 T 13-10-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 VEA_000517 2a2630ab38fb9db6a123b41de0283cb2 591 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 56 584 3.5E-251 T 13-10-2018 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 VEA_000517 2a2630ab38fb9db6a123b41de0283cb2 591 Gene3D G3DSA:3.40.50.1820 229 518 1.9E-9 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_001133 7e54ac033ff64e1f53c72d8648876351 487 Gene3D G3DSA:1.10.10.60 166 276 3.7E-23 T 13-10-2018 VEA_001133 7e54ac033ff64e1f53c72d8648876351 487 SMART SM00342 184 266 7.6E-19 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_001133 7e54ac033ff64e1f53c72d8648876351 487 Gene3D G3DSA:2.60.40.2440 283 382 2.7E-9 T 13-10-2018 IPR038175 CBM21 domain superfamily GO:0005515 VEA_001133 7e54ac033ff64e1f53c72d8648876351 487 Pfam PF12833 Helix-turn-helix domain 191 268 5.0E-16 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_001133 7e54ac033ff64e1f53c72d8648876351 487 SUPERFAMILY SSF46689 221 271 2.02E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_001081 218b0f238afb226ef9ac6b9129573337 394 PRINTS PR01035 Tetracycline resistance protein signature 303 323 8.4E-6 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VEA_001081 218b0f238afb226ef9ac6b9129573337 394 PRINTS PR01035 Tetracycline resistance protein signature 135 157 8.4E-6 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VEA_001081 218b0f238afb226ef9ac6b9129573337 394 PRINTS PR01035 Tetracycline resistance protein signature 19 35 8.4E-6 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VEA_001081 218b0f238afb226ef9ac6b9129573337 394 SUPERFAMILY SSF103473 3 380 5.75E-54 T 13-10-2018 IPR036259 MFS transporter superfamily VEA_001081 218b0f238afb226ef9ac6b9129573337 394 Pfam PF07690 Major Facilitator Superfamily 15 350 3.7E-42 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEA_001081 218b0f238afb226ef9ac6b9129573337 394 Gene3D G3DSA:1.20.1720.10 9 383 1.7E-79 T 13-10-2018 VEA_001891 8381c9fa96b69b244d54a4b8cb1228dd 500 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 12 497 9.1E-228 T 13-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 VEA_001891 8381c9fa96b69b244d54a4b8cb1228dd 500 Gene3D G3DSA:3.40.50.300 226 500 2.2E-127 T 13-10-2018 VEA_001891 8381c9fa96b69b244d54a4b8cb1228dd 500 SMART SM00382 253 376 5.4E-5 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_001891 8381c9fa96b69b244d54a4b8cb1228dd 500 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 320 334 - T 13-10-2018 IPR001482 Type II/IV secretion system protein VEA_001891 8381c9fa96b69b244d54a4b8cb1228dd 500 Gene3D G3DSA:3.30.450.90 88 225 1.1E-55 T 13-10-2018 VEA_001891 8381c9fa96b69b244d54a4b8cb1228dd 500 Gene3D G3DSA:3.30.300.160 1 78 4.6E-39 T 13-10-2018 VEA_001891 8381c9fa96b69b244d54a4b8cb1228dd 500 SUPERFAMILY SSF52540 107 497 1.08E-107 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001891 8381c9fa96b69b244d54a4b8cb1228dd 500 Pfam PF00437 Type II/IV secretion system protein 127 392 7.7E-92 T 13-10-2018 IPR001482 Type II/IV secretion system protein VEA_001891 8381c9fa96b69b244d54a4b8cb1228dd 500 SUPERFAMILY SSF160246 12 78 2.12E-17 T 13-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily VEA_003074 7bf59b07ba90658bbea1061aeade38e7 131 Pfam PF03061 Thioesterase superfamily 26 97 1.7E-19 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 VEA_003074 7bf59b07ba90658bbea1061aeade38e7 131 Gene3D G3DSA:3.10.129.10 1 131 2.3E-40 T 13-10-2018 VEA_003074 7bf59b07ba90658bbea1061aeade38e7 131 SUPERFAMILY SSF54637 9 129 1.2E-38 T 13-10-2018 IPR029069 HotDog domain superfamily VEA_001061 9db9a3296e57299c1c769d0565abef92 414 Pfam PF13416 Bacterial extracellular solute-binding protein 64 343 7.0E-17 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein VEA_001061 9db9a3296e57299c1c769d0565abef92 414 Gene3D G3DSA:3.40.190.10 25 371 1.6E-125 T 13-10-2018 VEA_001061 9db9a3296e57299c1c769d0565abef92 414 SUPERFAMILY SSF53850 25 409 5.31E-44 T 13-10-2018 VEA_001061 9db9a3296e57299c1c769d0565abef92 414 Gene3D G3DSA:3.40.190.10 140 396 1.6E-125 T 13-10-2018 VEA_000404 6dd5af96bca22c40132d6f38d3e69762 266 Pfam PF00005 ABC transporter 23 185 9.1E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_000404 6dd5af96bca22c40132d6f38d3e69762 266 Gene3D G3DSA:3.40.50.300 2 259 2.0E-61 T 13-10-2018 VEA_000404 6dd5af96bca22c40132d6f38d3e69762 266 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 235 256 4.0E-8 T 13-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal VEA_000404 6dd5af96bca22c40132d6f38d3e69762 266 SUPERFAMILY SSF52540 6 256 5.97E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000404 6dd5af96bca22c40132d6f38d3e69762 266 SMART SM00382 32 242 1.0E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_000669 95dca1f4afe9c259716ba4c774dbc28a 385 Gene3D G3DSA:1.10.287.470 106 180 1.3E-49 T 13-10-2018 VEA_000669 95dca1f4afe9c259716ba4c774dbc28a 385 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 60 372 3.7E-37 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VEA_000669 95dca1f4afe9c259716ba4c774dbc28a 385 Gene3D G3DSA:2.40.420.20 307 371 1.3E-49 T 13-10-2018 VEA_000669 95dca1f4afe9c259716ba4c774dbc28a 385 Gene3D G3DSA:2.40.30.170 60 306 1.3E-49 T 13-10-2018 VEA_000669 95dca1f4afe9c259716ba4c774dbc28a 385 Gene3D G3DSA:2.40.50.100 69 214 1.3E-49 T 13-10-2018 VEA_000669 95dca1f4afe9c259716ba4c774dbc28a 385 Pfam PF13437 HlyD family secretion protein 184 293 4.9E-9 T 13-10-2018 VEA_000669 95dca1f4afe9c259716ba4c774dbc28a 385 Pfam PF13533 Biotin-lipoyl like 72 120 4.3E-6 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VEA_000669 95dca1f4afe9c259716ba4c774dbc28a 385 SUPERFAMILY SSF111369 61 236 9.29E-22 T 13-10-2018 VEA_000698 24857049f24655e41a3e9f8eee1a0a13 241 Gene3D G3DSA:3.90.79.10 3 161 1.3E-25 T 13-10-2018 VEA_000698 24857049f24655e41a3e9f8eee1a0a13 241 SUPERFAMILY SSF55811 16 159 6.58E-18 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VEA_000698 24857049f24655e41a3e9f8eee1a0a13 241 Pfam PF00293 NUDIX domain 19 148 1.8E-8 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VEA_002844 8da532ac4d8c877973d87cf81c1a7edf 68 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 56 1.6E-20 T 13-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 VEA_002844 8da532ac4d8c877973d87cf81c1a7edf 68 Pfam PF04995 Heme exporter protein D (CcmD) 13 55 3.2E-17 T 13-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 VEA_000736 4b019ac7900b6ac2ed7a857ada5e96ad 243 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 6 220 1.3E-54 T 13-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 VEA_000736 4b019ac7900b6ac2ed7a857ada5e96ad 243 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 120 5.3E-32 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VEA_000736 4b019ac7900b6ac2ed7a857ada5e96ad 243 SUPERFAMILY SSF117143 77 176 3.14E-13 T 13-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like VEA_000736 4b019ac7900b6ac2ed7a857ada5e96ad 243 Pfam PF00460 Flagella basal body rod protein 7 35 1.3E-5 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VEA_000736 4b019ac7900b6ac2ed7a857ada5e96ad 243 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 167 239 2.1E-16 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VEA_000281 e68a660f44d1923ae04e85d3e908aa9f 342 Gene3D G3DSA:2.40.50.180 60 176 7.9E-30 T 13-10-2018 VEA_000281 e68a660f44d1923ae04e85d3e908aa9f 342 Gene3D G3DSA:2.30.30.40 52 170 7.9E-30 T 13-10-2018 VEA_000281 e68a660f44d1923ae04e85d3e908aa9f 342 Pfam PF01584 CheW-like domain 53 178 1.2E-29 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VEA_000281 e68a660f44d1923ae04e85d3e908aa9f 342 Gene3D G3DSA:3.40.50.2300 207 339 1.0E-28 T 13-10-2018 VEA_000281 e68a660f44d1923ae04e85d3e908aa9f 342 SUPERFAMILY SSF52172 209 336 2.13E-28 T 13-10-2018 IPR011006 CheY-like superfamily VEA_000281 e68a660f44d1923ae04e85d3e908aa9f 342 SMART SM00260 30 176 2.7E-26 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VEA_000281 e68a660f44d1923ae04e85d3e908aa9f 342 SMART SM00448 209 334 6.9E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_000281 e68a660f44d1923ae04e85d3e908aa9f 342 SUPERFAMILY SSF50341 23 181 1.27E-32 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VEA_000281 e68a660f44d1923ae04e85d3e908aa9f 342 PIRSF PIRSF002867 16 340 2.5E-102 T 13-10-2018 IPR024181 Chemotaxis response regulator CheV VEA_000281 e68a660f44d1923ae04e85d3e908aa9f 342 Pfam PF00072 Response regulator receiver domain 211 332 1.4E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_000588 b50bacf5086355bcf66308e8f1f8620b 282 Gene3D G3DSA:3.40.1090.10 2 89 3.2E-8 T 13-10-2018 VEA_000588 b50bacf5086355bcf66308e8f1f8620b 282 Gene3D G3DSA:3.40.1090.10 90 233 6.0E-11 T 13-10-2018 VEA_000588 b50bacf5086355bcf66308e8f1f8620b 282 SUPERFAMILY SSF52151 7 279 3.14E-34 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VEA_000588 b50bacf5086355bcf66308e8f1f8620b 282 Pfam PF01734 Patatin-like phospholipase 9 175 2.6E-20 T 13-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 VEA_003526 b58210c80d7e8147af0734d57dabfb61 281 ProSitePatterns PS00333 ATP-dependent DNA ligase signature 2. 176 199 - T 13-10-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 VEA_003526 b58210c80d7e8147af0734d57dabfb61 281 Pfam PF01068 ATP dependent DNA ligase domain 46 199 5.6E-7 T 13-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 VEA_003526 b58210c80d7e8147af0734d57dabfb61 281 Gene3D G3DSA:3.30.470.30 52 152 1.1E-55 T 13-10-2018 VEA_003526 b58210c80d7e8147af0734d57dabfb61 281 SUPERFAMILY SSF56091 27 199 7.91E-40 T 13-10-2018 VEA_003526 b58210c80d7e8147af0734d57dabfb61 281 Gene3D G3DSA:3.30.1490.70 32 191 1.1E-55 T 13-10-2018 VEA_003526 b58210c80d7e8147af0734d57dabfb61 281 Pfam PF14743 DNA ligase OB-like domain 213 278 9.2E-27 T 13-10-2018 IPR029319 DNA ligase, OB-like domain VEA_003526 b58210c80d7e8147af0734d57dabfb61 281 Gene3D G3DSA:2.40.50.140 199 281 4.8E-8 T 13-10-2018 VEA_003526 b58210c80d7e8147af0734d57dabfb61 281 SUPERFAMILY SSF50249 174 278 1.94E-30 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_002475 fed673e30d6764a163d4a5d2ac5be956 160 SUPERFAMILY SSF55826 7 151 1.31E-31 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VEA_002475 fed673e30d6764a163d4a5d2ac5be956 160 Pfam PF04073 Aminoacyl-tRNA editing domain 39 148 2.0E-18 T 13-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VEA_002475 fed673e30d6764a163d4a5d2ac5be956 160 Gene3D G3DSA:3.90.960.10 9 158 6.4E-24 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VEA_000328 c0744dfc5e35ac6c290b03e6f20dac32 128 Pfam PF13411 MerR HTH family regulatory protein 1 67 1.5E-17 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEA_000328 c0744dfc5e35ac6c290b03e6f20dac32 128 SMART SM00422 1 70 1.1E-26 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEA_000328 c0744dfc5e35ac6c290b03e6f20dac32 128 SUPERFAMILY SSF46955 1 126 2.45E-33 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily VEA_000328 c0744dfc5e35ac6c290b03e6f20dac32 128 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 127 6.0E-63 T 13-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 VEA_000328 c0744dfc5e35ac6c290b03e6f20dac32 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 2.1E-7 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEA_000328 c0744dfc5e35ac6c290b03e6f20dac32 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 2.1E-7 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEA_000328 c0744dfc5e35ac6c290b03e6f20dac32 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 2.1E-7 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEA_000328 c0744dfc5e35ac6c290b03e6f20dac32 128 Gene3D G3DSA:1.10.1660.10 1 125 4.9E-32 T 13-10-2018 VEA_000328 c0744dfc5e35ac6c290b03e6f20dac32 128 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEA_003991 d85338a37a3c6ffc236908f283871b72 235 SMART SM00382 33 221 1.1E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_003991 d85338a37a3c6ffc236908f283871b72 235 Gene3D G3DSA:3.40.50.300 1 234 1.6E-65 T 13-10-2018 VEA_003991 d85338a37a3c6ffc236908f283871b72 235 Pfam PF00005 ABC transporter 24 172 1.4E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_003991 d85338a37a3c6ffc236908f283871b72 235 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 4 223 1.1E-110 T 13-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 VEA_003991 d85338a37a3c6ffc236908f283871b72 235 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_003991 d85338a37a3c6ffc236908f283871b72 235 SUPERFAMILY SSF52540 4 228 5.19E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000399 2b3cad59b875f93d763be082c5f0fd64 273 SMART SM00382 40 218 1.6E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_000399 2b3cad59b875f93d763be082c5f0fd64 273 Pfam PF00005 ABC transporter 31 179 2.9E-26 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_000399 2b3cad59b875f93d763be082c5f0fd64 273 SUPERFAMILY SSF52540 13 251 1.25E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000399 2b3cad59b875f93d763be082c5f0fd64 273 Gene3D G3DSA:3.40.50.300 10 253 2.9E-57 T 13-10-2018 VEA_000399 2b3cad59b875f93d763be082c5f0fd64 273 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_004261 f2046fb0f29595da3100024846804c41 155 Pfam PF01029 NusB family 11 149 1.9E-35 T 13-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VEA_004261 f2046fb0f29595da3100024846804c41 155 SUPERFAMILY SSF48013 7 153 4.97E-39 T 13-10-2018 IPR035926 NusB-like superfamily VEA_004261 f2046fb0f29595da3100024846804c41 155 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 8 153 23.117 T 13-10-2018 IPR011605 NusB antitermination factor GO:0006353 VEA_004261 f2046fb0f29595da3100024846804c41 155 Gene3D G3DSA:1.10.940.10 3 155 5.4E-48 T 13-10-2018 IPR035926 NusB-like superfamily VEA_004261 f2046fb0f29595da3100024846804c41 155 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 10 151 2.9E-43 T 13-10-2018 IPR011605 NusB antitermination factor GO:0006353 VEA_000638 fadd0075465ce4d121afcf50835bd76d 324 SUPERFAMILY SSF53686 5 312 1.96E-89 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VEA_000638 fadd0075465ce4d121afcf50835bd76d 324 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 15 304 1.6E-80 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VEA_000638 fadd0075465ce4d121afcf50835bd76d 324 Gene3D G3DSA:3.40.50.1100 49 145 1.9E-107 T 13-10-2018 VEA_000638 fadd0075465ce4d121afcf50835bd76d 324 Gene3D G3DSA:3.40.50.1100 6 308 1.9E-107 T 13-10-2018 VEA_000041 9b70f73f24282d9a4cd06352180a89c2 126 SUPERFAMILY SSF54403 42 112 5.35E-13 T 13-10-2018 VEA_000041 9b70f73f24282d9a4cd06352180a89c2 126 Pfam PF00031 Cystatin domain 49 110 6.6E-5 T 13-10-2018 IPR000010 Cystatin domain GO:0004869 VEA_000041 9b70f73f24282d9a4cd06352180a89c2 126 Gene3D G3DSA:3.10.450.10 35 120 4.8E-7 T 13-10-2018 VEA_003569 dbb46d909198495fe953bdae3c7d1b96 259 Pfam PF01497 Periplasmic binding protein 2 217 6.4E-20 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain VEA_003569 dbb46d909198495fe953bdae3c7d1b96 259 SUPERFAMILY SSF53807 2 249 3.92E-43 T 13-10-2018 VEA_003569 dbb46d909198495fe953bdae3c7d1b96 259 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 17 35 2.5E-20 T 13-10-2018 VEA_003569 dbb46d909198495fe953bdae3c7d1b96 259 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 146 161 2.5E-20 T 13-10-2018 VEA_003569 dbb46d909198495fe953bdae3c7d1b96 259 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 170 188 2.5E-20 T 13-10-2018 VEA_003569 dbb46d909198495fe953bdae3c7d1b96 259 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 234 247 2.5E-20 T 13-10-2018 VEA_003569 dbb46d909198495fe953bdae3c7d1b96 259 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 48 63 2.5E-20 T 13-10-2018 VEA_003569 dbb46d909198495fe953bdae3c7d1b96 259 Gene3D G3DSA:3.40.50.1980 87 253 3.6E-49 T 13-10-2018 VEA_003569 dbb46d909198495fe953bdae3c7d1b96 259 Gene3D G3DSA:3.40.50.1980 1 84 1.1E-19 T 13-10-2018 VEA_002561 746ca774d142df25d7c923205fd2a323 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 41.242 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 VEA_002561 746ca774d142df25d7c923205fd2a323 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 262 7.4E-114 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 VEA_002561 746ca774d142df25d7c923205fd2a323 264 PIRSF PIRSF000388 1 264 3.6E-100 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 VEA_002561 746ca774d142df25d7c923205fd2a323 264 Gene3D G3DSA:3.20.20.60 1 263 4.7E-106 T 13-10-2018 VEA_002561 746ca774d142df25d7c923205fd2a323 264 SUPERFAMILY SSF51621 3 262 6.73E-106 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VEA_002561 746ca774d142df25d7c923205fd2a323 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 258 7.8E-108 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 VEA_001575 6c39348f28ec56f730bef590811d264a 222 SUPERFAMILY SSF161098 9 202 2.35E-31 T 13-10-2018 IPR035906 MetI-like superfamily VEA_001575 6c39348f28ec56f730bef590811d264a 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 215 1.3E-13 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_001575 6c39348f28ec56f730bef590811d264a 222 Gene3D G3DSA:1.10.3720.10 3 217 2.6E-41 T 13-10-2018 IPR035906 MetI-like superfamily VEA_001575 6c39348f28ec56f730bef590811d264a 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 6 112 1.8E-15 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VEA_000514 4c1f924eb25a1cee6bf5ef822c468445 152 Gene3D G3DSA:1.10.1130.10 66 133 2.2E-28 T 13-10-2018 VEA_000514 4c1f924eb25a1cee6bf5ef822c468445 152 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 33 146 1.3E-47 T 13-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB VEA_000514 4c1f924eb25a1cee6bf5ef822c468445 152 PIRSF PIRSF006105 1 152 1.8E-46 T 13-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB VEA_000514 4c1f924eb25a1cee6bf5ef822c468445 152 SUPERFAMILY SSF48695 39 149 2.1E-40 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily VEA_002697 9f3f3bcf62ce9e1938704ba92020f6dd 272 Gene3D G3DSA:2.40.230.20 23 272 1.5E-81 T 13-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 VEA_002697 9f3f3bcf62ce9e1938704ba92020f6dd 272 SUPERFAMILY SSF111364 30 272 1.14E-83 T 13-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 VEA_002697 9f3f3bcf62ce9e1938704ba92020f6dd 272 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 30 272 1.7E-99 T 13-10-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 VEA_003421 1a896ef5b2dacb8755d7e37d405474e5 340 PIRSF PIRSF001361 1 340 1.7E-153 T 13-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VEA_003421 1a896ef5b2dacb8755d7e37d405474e5 340 SUPERFAMILY SSF51569 3 337 2.73E-130 T 13-10-2018 VEA_003421 1a896ef5b2dacb8755d7e37d405474e5 340 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 3 337 3.4E-158 T 13-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VEA_003421 1a896ef5b2dacb8755d7e37d405474e5 340 Gene3D G3DSA:3.20.20.70 1 339 3.3E-151 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_003421 1a896ef5b2dacb8755d7e37d405474e5 340 Pfam PF00793 DAHP synthetase I family 32 326 1.0E-98 T 13-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VEA_001126 de8aa953a62cfb7ffb1b033ab8dedae8 493 PRINTS PR00147 DNA photolyase signature 336 354 3.1E-6 T 13-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VEA_001126 de8aa953a62cfb7ffb1b033ab8dedae8 493 PRINTS PR00147 DNA photolyase signature 316 332 3.1E-6 T 13-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VEA_001126 de8aa953a62cfb7ffb1b033ab8dedae8 493 Gene3D G3DSA:1.25.40.80 167 278 8.3E-15 T 13-10-2018 VEA_001126 de8aa953a62cfb7ffb1b033ab8dedae8 493 Gene3D G3DSA:3.40.50.620 1 130 9.4E-28 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_001126 de8aa953a62cfb7ffb1b033ab8dedae8 493 Gene3D G3DSA:1.10.579.10 290 480 4.5E-60 T 13-10-2018 VEA_001126 de8aa953a62cfb7ffb1b033ab8dedae8 493 SUPERFAMILY SSF48173 191 468 1.27E-78 T 13-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 VEA_001126 de8aa953a62cfb7ffb1b033ab8dedae8 493 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 316 328 - T 13-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal VEA_001126 de8aa953a62cfb7ffb1b033ab8dedae8 493 SUPERFAMILY SSF52425 4 194 1.16E-43 T 13-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 VEA_001126 de8aa953a62cfb7ffb1b033ab8dedae8 493 Pfam PF03441 FAD binding domain of DNA photolyase 266 463 4.3E-57 T 13-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 VEA_001126 de8aa953a62cfb7ffb1b033ab8dedae8 493 Pfam PF00875 DNA photolyase 6 131 2.5E-22 T 13-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 VEA_000385 931bfcdbd82d8399b68d8980d83edd18 160 Gene3D G3DSA:2.160.10.10 1 160 9.4E-58 T 13-10-2018 VEA_000385 931bfcdbd82d8399b68d8980d83edd18 160 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 106 140 1.8E-9 T 13-10-2018 IPR001451 Hexapeptide repeat VEA_000385 931bfcdbd82d8399b68d8980d83edd18 160 SUPERFAMILY SSF51161 6 158 3.33E-47 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily VEA_000385 931bfcdbd82d8399b68d8980d83edd18 160 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 114 142 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VEA_000612 e39c640d4055bc9817b6cf37e9cc4078 382 Pfam PF00155 Aminotransferase class I and II 26 375 4.3E-31 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VEA_000612 e39c640d4055bc9817b6cf37e9cc4078 382 SUPERFAMILY SSF53383 3 380 9.85E-90 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_000612 e39c640d4055bc9817b6cf37e9cc4078 382 Gene3D G3DSA:3.40.640.10 60 273 3.3E-110 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_000612 e39c640d4055bc9817b6cf37e9cc4078 382 Gene3D G3DSA:3.90.1150.10 15 378 3.3E-110 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEA_004328 b66ff4e23c4fa5f7fd9a34e00c39b558 196 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 7 16 - T 13-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 VEA_004328 b66ff4e23c4fa5f7fd9a34e00c39b558 196 Pfam PF01184 GPR1/FUN34/yaaH family 3 174 2.0E-35 T 13-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 VEA_002298 ed4013b6aceaa91c52e057c898c02da5 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.85 T 13-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 VEA_002298 ed4013b6aceaa91c52e057c898c02da5 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 13-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_002298 ed4013b6aceaa91c52e057c898c02da5 156 Gene3D G3DSA:1.10.455.10 2 155 1.5E-64 T 13-10-2018 IPR036823 Ribosomal protein S7 domain superfamily VEA_002298 ed4013b6aceaa91c52e057c898c02da5 156 PIRSF PIRSF002122 3 156 5.1E-63 T 13-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 VEA_002298 ed4013b6aceaa91c52e057c898c02da5 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 6.9E-66 T 13-10-2018 IPR023798 Ribosomal protein S7 domain VEA_002298 ed4013b6aceaa91c52e057c898c02da5 156 SUPERFAMILY SSF47973 6 149 1.57E-59 T 13-10-2018 IPR036823 Ribosomal protein S7 domain superfamily VEA_002298 ed4013b6aceaa91c52e057c898c02da5 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 5.6E-71 T 13-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 VEA_003708 e5020c57b0b22f8a9919d6458ef889cc 263 Pfam PF17131 Outer membrane lipoprotein-sorting protein 78 261 1.7E-68 T 13-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein VEA_003708 e5020c57b0b22f8a9919d6458ef889cc 263 SUPERFAMILY SSF89392 107 214 3.61E-6 T 13-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX VEA_003708 e5020c57b0b22f8a9919d6458ef889cc 263 Gene3D G3DSA:2.50.20.10 25 261 9.4E-100 T 13-10-2018 VEA_003115 4575851b477b3580aa56c277fe950bd1 200 TIGRFAM TIGR03146 cyt_nit_nrfB: cytochrome c nitrite reductase, pentaheme subunit 42 188 1.7E-61 T 13-10-2018 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit GO:0006807|GO:0020037|GO:0042597 VEA_003115 4575851b477b3580aa56c277fe950bd1 200 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 152 188 1.0E-4 T 13-10-2018 IPR010177 Doubled CXXCH motif VEA_003115 4575851b477b3580aa56c277fe950bd1 200 Gene3D G3DSA:3.90.10.10 141 197 2.7E-5 T 13-10-2018 VEA_003115 4575851b477b3580aa56c277fe950bd1 200 SUPERFAMILY SSF48695 12 191 1.45E-26 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily VEA_003115 4575851b477b3580aa56c277fe950bd1 200 Gene3D G3DSA:3.90.10.10 39 140 6.3E-6 T 13-10-2018 VEA_002187 efeaa6e75677f0ef8a01570c539d068d 522 Gene3D G3DSA:1.10.10.10 5 105 3.1E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_002187 efeaa6e75677f0ef8a01570c539d068d 522 Gene3D G3DSA:1.25.40.10 353 515 7.2E-18 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_002187 efeaa6e75677f0ef8a01570c539d068d 522 SUPERFAMILY SSF46894 6 103 8.79E-18 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEA_002187 efeaa6e75677f0ef8a01570c539d068d 522 SMART SM00862 24 100 1.8E-14 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEA_002187 efeaa6e75677f0ef8a01570c539d068d 522 SUPERFAMILY SSF48452 337 488 6.07E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_002187 efeaa6e75677f0ef8a01570c539d068d 522 Pfam PF00486 Transcriptional regulatory protein, C terminal 25 100 4.0E-16 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEA_004131 637cbe365a0567098d28a011dc2a700a 529 Gene3D G3DSA:3.40.50.720 379 529 2.4E-33 T 13-10-2018 VEA_004131 637cbe365a0567098d28a011dc2a700a 529 Pfam PF02254 TrkA-N domain 388 504 2.3E-18 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VEA_004131 637cbe365a0567098d28a011dc2a700a 529 Pfam PF00999 Sodium/hydrogen exchanger family 3 349 7.9E-41 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VEA_004131 637cbe365a0567098d28a011dc2a700a 529 SUPERFAMILY SSF51735 387 517 4.28E-14 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_004131 637cbe365a0567098d28a011dc2a700a 529 Gene3D G3DSA:1.20.1530.20 2 362 3.5E-48 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily VEA_003324 ceeadcf754f8efc647b320a068e6e3e6 238 Gene3D G3DSA:3.40.50.1360 1 238 6.8E-88 T 13-10-2018 VEA_003324 ceeadcf754f8efc647b320a068e6e3e6 238 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 225 7.9E-61 T 13-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 VEA_003324 ceeadcf754f8efc647b320a068e6e3e6 238 SUPERFAMILY SSF100950 3 237 3.35E-60 T 13-10-2018 IPR037171 NagB/RpiA transferase-like VEA_003324 ceeadcf754f8efc647b320a068e6e3e6 238 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 9 236 1.2E-52 T 13-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 VEA_001256 3dc8acf9c0b2ed29715b53cf6903a0cc 665 Pfam PF00326 Prolyl oligopeptidase family 446 659 4.2E-56 T 13-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 VEA_001256 3dc8acf9c0b2ed29715b53cf6903a0cc 665 Gene3D G3DSA:2.130.10.120 72 392 2.1E-144 T 13-10-2018 VEA_001256 3dc8acf9c0b2ed29715b53cf6903a0cc 665 Gene3D G3DSA:3.40.50.1820 22 655 2.1E-144 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_001256 3dc8acf9c0b2ed29715b53cf6903a0cc 665 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 22 390 2.9E-20 T 13-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 VEA_001256 3dc8acf9c0b2ed29715b53cf6903a0cc 665 SUPERFAMILY SSF53474 404 654 1.3E-37 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_001256 3dc8acf9c0b2ed29715b53cf6903a0cc 665 SUPERFAMILY SSF50993 20 388 4.18E-31 T 13-10-2018 VEA_001256 3dc8acf9c0b2ed29715b53cf6903a0cc 665 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 431 449 5.8E-35 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VEA_001256 3dc8acf9c0b2ed29715b53cf6903a0cc 665 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 457 481 5.8E-35 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VEA_001256 3dc8acf9c0b2ed29715b53cf6903a0cc 665 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 485 504 5.8E-35 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VEA_001256 3dc8acf9c0b2ed29715b53cf6903a0cc 665 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 590 612 5.8E-35 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VEA_001256 3dc8acf9c0b2ed29715b53cf6903a0cc 665 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 514 534 5.8E-35 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VEA_001256 3dc8acf9c0b2ed29715b53cf6903a0cc 665 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 572 587 5.8E-35 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VEA_003360 5905fc136cd340a5532e72f27c19c7dd 241 TIGRFAM TIGR01401 fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT 1 233 3.1E-76 T 13-10-2018 IPR006304 Type III secretion protein SpaR/YscT GO:0016021 VEA_003360 5905fc136cd340a5532e72f27c19c7dd 241 Pfam PF01311 Bacterial export proteins, family 1 1 226 3.5E-54 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VEA_003360 5905fc136cd340a5532e72f27c19c7dd 241 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 60 79 1.1E-24 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VEA_003360 5905fc136cd340a5532e72f27c19c7dd 241 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 162 184 1.1E-24 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VEA_003360 5905fc136cd340a5532e72f27c19c7dd 241 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 184 203 1.1E-24 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VEA_004393 fa4ccb260ac80322cb0f1c221bdac25b 242 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 25 240 1.0E-60 T 13-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase VEA_004393 fa4ccb260ac80322cb0f1c221bdac25b 242 SUPERFAMILY SSF64438 3 241 9.89E-83 T 13-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic VEA_004393 fa4ccb260ac80322cb0f1c221bdac25b 242 Gene3D G3DSA:3.60.140.10 1 240 1.9E-87 T 13-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily VEA_004393 fa4ccb260ac80322cb0f1c221bdac25b 242 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 19 239 2.9E-72 T 13-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase VEA_002029 d0fbd313f38727b25418d232a0089077 288 SUPERFAMILY SSF52943 2 288 3.04E-96 T 13-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_002029 d0fbd313f38727b25418d232a0089077 288 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.2E-36 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_002029 d0fbd313f38727b25418d232a0089077 288 PRINTS PR00126 ATP synthase gamma subunit signature 266 287 1.2E-36 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_002029 d0fbd313f38727b25418d232a0089077 288 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.2E-36 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_002029 d0fbd313f38727b25418d232a0089077 288 PRINTS PR00126 ATP synthase gamma subunit signature 235 254 1.2E-36 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_002029 d0fbd313f38727b25418d232a0089077 288 Gene3D G3DSA:3.40.1380.10 61 207 8.9E-111 T 13-10-2018 VEA_002029 d0fbd313f38727b25418d232a0089077 288 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 274 287 - T 13-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_002029 d0fbd313f38727b25418d232a0089077 288 Gene3D G3DSA:1.10.287.80 6 284 8.9E-111 T 13-10-2018 VEA_002029 d0fbd313f38727b25418d232a0089077 288 Pfam PF00231 ATP synthase 5 287 9.4E-99 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_002029 d0fbd313f38727b25418d232a0089077 288 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 288 36.861 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_002029 d0fbd313f38727b25418d232a0089077 288 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 288 1.6E-111 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_003826 4195e5084041a93e9b2a0c20f01a9016 383 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 5 175 1.3E-71 T 13-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal VEA_003826 4195e5084041a93e9b2a0c20f01a9016 383 PIRSF PIRSF000014 1 383 6.8E-156 T 13-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 VEA_003826 4195e5084041a93e9b2a0c20f01a9016 383 Gene3D G3DSA:1.10.3820.10 5 181 4.3E-38 T 13-10-2018 IPR038266 NapC/NirT cytochrome c superfamily VEA_003826 4195e5084041a93e9b2a0c20f01a9016 383 SUPERFAMILY SSF46626 296 375 9.78E-5 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEA_003826 4195e5084041a93e9b2a0c20f01a9016 383 SUPERFAMILY SSF48695 2 176 8.39E-60 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily VEA_003826 4195e5084041a93e9b2a0c20f01a9016 383 TIGRFAM TIGR02162 torC: trimethylamine-N-oxide reductase c-type cytochrome TorC 1 383 4.8E-184 T 13-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 VEA_003159 bcb7c0f27665a89510b23ec5fcab3e1a 566 Gene3D G3DSA:3.30.565.10 268 430 1.6E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_003159 bcb7c0f27665a89510b23ec5fcab3e1a 566 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 316 426 4.3E-30 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_003159 bcb7c0f27665a89510b23ec5fcab3e1a 566 SUPERFAMILY SSF55874 258 425 6.94E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_003159 bcb7c0f27665a89510b23ec5fcab3e1a 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 424 4.1E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_003159 bcb7c0f27665a89510b23ec5fcab3e1a 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 380 4.1E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_003159 bcb7c0f27665a89510b23ec5fcab3e1a 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 366 4.1E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_003159 bcb7c0f27665a89510b23ec5fcab3e1a 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 405 4.1E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_003159 bcb7c0f27665a89510b23ec5fcab3e1a 566 Gene3D G3DSA:1.10.287.130 184 267 4.7E-23 T 13-10-2018 VEA_003159 bcb7c0f27665a89510b23ec5fcab3e1a 566 Gene3D G3DSA:3.40.50.2300 447 566 1.2E-34 T 13-10-2018 VEA_003159 bcb7c0f27665a89510b23ec5fcab3e1a 566 SUPERFAMILY SSF47384 193 269 7.06E-20 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEA_003159 bcb7c0f27665a89510b23ec5fcab3e1a 566 Pfam PF00072 Response regulator receiver domain 451 558 3.1E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_003159 bcb7c0f27665a89510b23ec5fcab3e1a 566 SUPERFAMILY SSF52172 446 565 1.71E-33 T 13-10-2018 IPR011006 CheY-like superfamily VEA_003159 bcb7c0f27665a89510b23ec5fcab3e1a 566 SMART SM00448 449 560 5.1E-30 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_003159 bcb7c0f27665a89510b23ec5fcab3e1a 566 SMART SM00388 204 269 9.8E-21 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_003159 bcb7c0f27665a89510b23ec5fcab3e1a 566 Pfam PF00512 His Kinase A (phospho-acceptor) domain 206 269 7.4E-20 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_003159 bcb7c0f27665a89510b23ec5fcab3e1a 566 SMART SM00387 316 427 1.3E-38 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_002288 788ffe8791605444387454b644aff518 178 Gene3D G3DSA:2.40.10.330 71 121 2.3E-58 T 13-10-2018 VEA_002288 788ffe8791605444387454b644aff518 178 Gene3D G3DSA:3.10.50.40 3 154 2.3E-58 T 13-10-2018 VEA_002288 788ffe8791605444387454b644aff518 178 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 136 3.4E-12 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VEA_002288 788ffe8791605444387454b644aff518 178 SUPERFAMILY SSF54534 2 140 2.16E-34 T 13-10-2018 VEA_001695 4ca7bcbedb66479f228eedfcd5e1b431 212 Pfam PF01625 Peptide methionine sulfoxide reductase 44 197 2.0E-68 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VEA_001695 4ca7bcbedb66479f228eedfcd5e1b431 212 SUPERFAMILY SSF55068 3 207 1.1E-79 T 13-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VEA_001695 4ca7bcbedb66479f228eedfcd5e1b431 212 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 42 203 38.194 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VEA_001695 4ca7bcbedb66479f228eedfcd5e1b431 212 Gene3D G3DSA:3.30.1060.10 3 212 2.0E-92 T 13-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VEA_001695 4ca7bcbedb66479f228eedfcd5e1b431 212 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 44 197 5.2E-68 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VEA_000929 94d440fd9ae559c67d59dc75b8720b93 382 SMART SM00829 23 378 7.2E-4 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VEA_000929 94d440fd9ae559c67d59dc75b8720b93 382 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 39 165 9.3E-26 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VEA_000929 94d440fd9ae559c67d59dc75b8720b93 382 SUPERFAMILY SSF51735 171 345 2.67E-50 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_000929 94d440fd9ae559c67d59dc75b8720b93 382 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 72 86 - T 13-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 VEA_000929 94d440fd9ae559c67d59dc75b8720b93 382 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 13 380 1.0E-228 T 13-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 VEA_000929 94d440fd9ae559c67d59dc75b8720b93 382 SUPERFAMILY SSF50129 10 196 1.92E-72 T 13-10-2018 IPR011032 GroES-like superfamily VEA_000929 94d440fd9ae559c67d59dc75b8720b93 382 Gene3D G3DSA:3.90.180.10 17 375 8.6E-153 T 13-10-2018 VEA_000929 94d440fd9ae559c67d59dc75b8720b93 382 Pfam PF00107 Zinc-binding dehydrogenase 208 336 7.9E-27 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VEA_000929 94d440fd9ae559c67d59dc75b8720b93 382 SUPERFAMILY SSF50129 329 379 4.19E-11 T 13-10-2018 IPR011032 GroES-like superfamily VEA_000929 94d440fd9ae559c67d59dc75b8720b93 382 Gene3D G3DSA:3.40.50.720 185 323 8.6E-153 T 13-10-2018 VEA_002516 4c274bff7184557b11be49520a502776 328 Gene3D G3DSA:1.10.10.10 162 237 3.8E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_002516 4c274bff7184557b11be49520a502776 328 PRINTS PR00046 Major sigma-70 factor signature 282 297 6.2E-28 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEA_002516 4c274bff7184557b11be49520a502776 328 PRINTS PR00046 Major sigma-70 factor signature 261 273 6.2E-28 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEA_002516 4c274bff7184557b11be49520a502776 328 PRINTS PR00046 Major sigma-70 factor signature 297 308 6.2E-28 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEA_002516 4c274bff7184557b11be49520a502776 328 PRINTS PR00046 Major sigma-70 factor signature 137 145 6.2E-28 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEA_002516 4c274bff7184557b11be49520a502776 328 PRINTS PR00046 Major sigma-70 factor signature 113 126 6.2E-28 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEA_002516 4c274bff7184557b11be49520a502776 328 SUPERFAMILY SSF88659 162 235 2.09E-16 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VEA_002516 4c274bff7184557b11be49520a502776 328 SUPERFAMILY SSF88659 219 318 2.06E-24 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VEA_002516 4c274bff7184557b11be49520a502776 328 Pfam PF04539 Sigma-70 region 3 169 242 2.5E-22 T 13-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 VEA_002516 4c274bff7184557b11be49520a502776 328 Pfam PF04545 Sigma-70, region 4 257 310 2.2E-17 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 VEA_002516 4c274bff7184557b11be49520a502776 328 Gene3D G3DSA:1.10.601.10 2 158 8.6E-48 T 13-10-2018 VEA_002516 4c274bff7184557b11be49520a502776 328 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 20 323 39.619 T 13-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VEA_002516 4c274bff7184557b11be49520a502776 328 Gene3D G3DSA:1.10.10.10 245 323 3.2E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_002516 4c274bff7184557b11be49520a502776 328 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 44 323 8.5E-139 T 13-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VEA_002516 4c274bff7184557b11be49520a502776 328 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 113 126 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEA_002516 4c274bff7184557b11be49520a502776 328 Pfam PF00140 Sigma-70 factor, region 1.2 51 84 4.0E-12 T 13-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VEA_002516 4c274bff7184557b11be49520a502776 328 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 282 308 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VEA_002516 4c274bff7184557b11be49520a502776 328 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 85 311 3.5E-36 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VEA_002516 4c274bff7184557b11be49520a502776 328 SUPERFAMILY SSF88946 50 159 9.42E-46 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VEA_002516 4c274bff7184557b11be49520a502776 328 Pfam PF04542 Sigma-70 region 2 89 158 6.8E-20 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VEA_000354 69c7797c870fa445d8c261b305eee296 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 433 3.4E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_000354 69c7797c870fa445d8c261b305eee296 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 491 3.4E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_000354 69c7797c870fa445d8c261b305eee296 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 447 3.4E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_000354 69c7797c870fa445d8c261b305eee296 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 472 3.4E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_000354 69c7797c870fa445d8c261b305eee296 785 Pfam PF00072 Response regulator receiver domain 517 627 4.9E-17 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_000354 69c7797c870fa445d8c261b305eee296 785 SUPERFAMILY SSF55874 323 494 1.44E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_000354 69c7797c870fa445d8c261b305eee296 785 SMART SM00448 515 627 1.7E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_000354 69c7797c870fa445d8c261b305eee296 785 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 382 491 4.6E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_000354 69c7797c870fa445d8c261b305eee296 785 Gene3D G3DSA:3.30.565.10 335 495 4.6E-45 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_000354 69c7797c870fa445d8c261b305eee296 785 SMART SM00387 381 494 1.2E-32 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_000354 69c7797c870fa445d8c261b305eee296 785 Gene3D G3DSA:3.40.50.2300 499 635 1.3E-31 T 13-10-2018 VEA_000354 69c7797c870fa445d8c261b305eee296 785 Gene3D G3DSA:1.10.287.130 236 332 9.6E-28 T 13-10-2018 VEA_000354 69c7797c870fa445d8c261b305eee296 785 Pfam PF01627 Hpt domain 675 761 1.6E-6 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VEA_000354 69c7797c870fa445d8c261b305eee296 785 SUPERFAMILY SSF47384 253 335 1.1E-20 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEA_000354 69c7797c870fa445d8c261b305eee296 785 SMART SM00388 269 334 1.3E-20 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_000354 69c7797c870fa445d8c261b305eee296 785 SUPERFAMILY SSF52172 513 653 1.99E-29 T 13-10-2018 IPR011006 CheY-like superfamily VEA_000354 69c7797c870fa445d8c261b305eee296 785 Pfam PF00512 His Kinase A (phospho-acceptor) domain 269 333 3.3E-17 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_000354 69c7797c870fa445d8c261b305eee296 785 Gene3D G3DSA:1.20.120.160 666 777 3.0E-11 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 VEA_000354 69c7797c870fa445d8c261b305eee296 785 SUPERFAMILY SSF47226 611 759 8.11E-14 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 VEA_000700 93e7563297b25796dddd3279cd4429ee 118 Gene3D G3DSA:3.10.180.10 6 117 1.6E-16 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEA_000700 93e7563297b25796dddd3279cd4429ee 118 SUPERFAMILY SSF54593 6 116 7.29E-20 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEA_004361 89c90708e502b77be69f429bce9d6e8c 158 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 158 45.865 T 13-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 VEA_004361 89c90708e502b77be69f429bce9d6e8c 158 Pfam PF02082 Transcriptional regulator 1 73 4.7E-22 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type VEA_004361 89c90708e502b77be69f429bce9d6e8c 158 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 120 8.4E-42 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type VEA_004361 89c90708e502b77be69f429bce9d6e8c 158 SUPERFAMILY SSF46785 1 123 1.8E-31 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_004361 89c90708e502b77be69f429bce9d6e8c 158 Gene3D G3DSA:1.10.10.10 1 134 9.3E-48 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_004361 89c90708e502b77be69f429bce9d6e8c 158 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 39 57 - T 13-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site VEA_002546 d253da953a653d1391894195d13d8f0d 157 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEA_002546 d253da953a653d1391894195d13d8f0d 157 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 31 5.7E-11 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEA_002546 d253da953a653d1391894195d13d8f0d 157 SUPERFAMILY SSF54523 33 156 1.88E-9 T 13-10-2018 VEA_002546 d253da953a653d1391894195d13d8f0d 157 SUPERFAMILY SSF54523 12 71 1.33E-18 T 13-10-2018 VEA_002546 d253da953a653d1391894195d13d8f0d 157 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 32 2.4E-10 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEA_002546 d253da953a653d1391894195d13d8f0d 157 Gene3D G3DSA:3.30.700.10 12 157 8.7E-25 T 13-10-2018 VEA_004016 8fca7dbdeace908bf8a05c030509dd62 154 SUPERFAMILY SSF54909 63 152 1.32E-19 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel VEA_004016 8fca7dbdeace908bf8a05c030509dd62 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 5.4E-13 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEA_004016 8fca7dbdeace908bf8a05c030509dd62 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 5.4E-13 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEA_004016 8fca7dbdeace908bf8a05c030509dd62 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 5.4E-13 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEA_004016 8fca7dbdeace908bf8a05c030509dd62 154 SUPERFAMILY SSF46785 2 92 6.92E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_004016 8fca7dbdeace908bf8a05c030509dd62 154 SMART SM00344 3 112 3.7E-44 T 13-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VEA_004016 8fca7dbdeace908bf8a05c030509dd62 154 Pfam PF01037 Lrp/AsnC ligand binding domain 70 142 2.7E-20 T 13-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VEA_004016 8fca7dbdeace908bf8a05c030509dd62 154 Gene3D G3DSA:3.30.70.920 56 140 1.0E-20 T 13-10-2018 VEA_004016 8fca7dbdeace908bf8a05c030509dd62 154 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 13-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VEA_004016 8fca7dbdeace908bf8a05c030509dd62 154 Gene3D G3DSA:1.10.10.10 4 55 3.8E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_004016 8fca7dbdeace908bf8a05c030509dd62 154 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 1.0E-16 T 13-10-2018 VEA_003667 67134df50dcde362509c3b5ad71c017b 426 Gene3D G3DSA:1.10.3720.10 153 425 5.4E-49 T 13-10-2018 IPR035906 MetI-like superfamily VEA_003667 67134df50dcde362509c3b5ad71c017b 426 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 226 412 7.6E-9 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_003667 67134df50dcde362509c3b5ad71c017b 426 SUPERFAMILY SSF161098 37 416 6.67E-47 T 13-10-2018 IPR035906 MetI-like superfamily VEA_000358 587f0fe84fb56888afc8ffe68f90dd49 260 Gene3D G3DSA:3.30.479.30 47 178 4.6E-49 T 13-10-2018 VEA_000358 587f0fe84fb56888afc8ffe68f90dd49 260 SUPERFAMILY SSF117892 50 183 2.62E-43 T 13-10-2018 IPR036013 Band 7/SPFH domain superfamily VEA_000358 587f0fe84fb56888afc8ffe68f90dd49 260 Pfam PF01145 SPFH domain / Band 7 family 24 192 2.8E-35 T 13-10-2018 IPR001107 Band 7 domain VEA_000358 587f0fe84fb56888afc8ffe68f90dd49 260 PRINTS PR00721 Stomatin signature 152 170 1.8E-63 T 13-10-2018 IPR001972 Stomatin family GO:0016020 VEA_000358 587f0fe84fb56888afc8ffe68f90dd49 260 PRINTS PR00721 Stomatin signature 73 94 1.8E-63 T 13-10-2018 IPR001972 Stomatin family GO:0016020 VEA_000358 587f0fe84fb56888afc8ffe68f90dd49 260 PRINTS PR00721 Stomatin signature 108 125 1.8E-63 T 13-10-2018 IPR001972 Stomatin family GO:0016020 VEA_000358 587f0fe84fb56888afc8ffe68f90dd49 260 PRINTS PR00721 Stomatin signature 128 151 1.8E-63 T 13-10-2018 IPR001972 Stomatin family GO:0016020 VEA_000358 587f0fe84fb56888afc8ffe68f90dd49 260 PRINTS PR00721 Stomatin signature 26 48 1.8E-63 T 13-10-2018 IPR001972 Stomatin family GO:0016020 VEA_000358 587f0fe84fb56888afc8ffe68f90dd49 260 PRINTS PR00721 Stomatin signature 171 192 1.8E-63 T 13-10-2018 IPR001972 Stomatin family GO:0016020 VEA_000358 587f0fe84fb56888afc8ffe68f90dd49 260 PRINTS PR00721 Stomatin signature 196 219 1.8E-63 T 13-10-2018 IPR001972 Stomatin family GO:0016020 VEA_000358 587f0fe84fb56888afc8ffe68f90dd49 260 SMART SM00244 19 176 9.2E-65 T 13-10-2018 IPR001107 Band 7 domain VEA_003072 6e0f7a29404634148708a5e3f8b9db48 130 PIRSF PIRSF007010 1 130 1.2E-56 T 13-10-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein VEA_003072 6e0f7a29404634148708a5e3f8b9db48 130 Gene3D G3DSA:3.30.300.250 18 129 2.3E-43 T 13-10-2018 VEA_003072 6e0f7a29404634148708a5e3f8b9db48 130 Pfam PF16549 Type II secretion system (T2SS) pilotin, S protein 14 127 1.3E-49 T 13-10-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein VEA_004450 aa3d867da253e8fe8bd0ac78fe0956a3 226 Gene3D G3DSA:3.40.470.10 1 225 5.2E-106 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VEA_004450 aa3d867da253e8fe8bd0ac78fe0956a3 226 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.583 T 13-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VEA_004450 aa3d867da253e8fe8bd0ac78fe0956a3 226 Pfam PF03167 Uracil DNA glycosylase superfamily 54 209 1.1E-26 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VEA_004450 aa3d867da253e8fe8bd0ac78fe0956a3 226 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 13-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VEA_004450 aa3d867da253e8fe8bd0ac78fe0956a3 226 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 5 214 5.6E-88 T 13-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VEA_004450 aa3d867da253e8fe8bd0ac78fe0956a3 226 SMART SM00986 49 210 7.8E-41 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VEA_004450 aa3d867da253e8fe8bd0ac78fe0956a3 226 SMART SM00987 49 210 7.8E-41 T 13-10-2018 VEA_004450 aa3d867da253e8fe8bd0ac78fe0956a3 226 SUPERFAMILY SSF52141 4 222 2.83E-97 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VEA_003785 075ee497996c9cf2308a66757d8fb780 441 SMART SM00387 334 440 5.5E-18 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_003785 075ee497996c9cf2308a66757d8fb780 441 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 437 2.9E-12 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_003785 075ee497996c9cf2308a66757d8fb780 441 SUPERFAMILY SSF55874 301 436 7.73E-26 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_003785 075ee497996c9cf2308a66757d8fb780 441 Gene3D G3DSA:1.10.287.130 180 285 2.0E-7 T 13-10-2018 VEA_003785 075ee497996c9cf2308a66757d8fb780 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 7.4E-7 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_003785 075ee497996c9cf2308a66757d8fb780 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 383 7.4E-7 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_003785 075ee497996c9cf2308a66757d8fb780 441 Gene3D G3DSA:3.30.565.10 301 440 2.0E-27 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_003785 075ee497996c9cf2308a66757d8fb780 441 SUPERFAMILY SSF47384 216 278 9.81E-6 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEA_000994 1f766455a5c89798ad3e243bd6c6db7d 324 SUPERFAMILY SSF109709 152 240 2.75E-5 T 13-10-2018 VEA_000994 1f766455a5c89798ad3e243bd6c6db7d 324 Pfam PF02195 ParB-like nuclease domain 78 145 1.3E-7 T 13-10-2018 IPR003115 ParB/Sulfiredoxin VEA_000994 1f766455a5c89798ad3e243bd6c6db7d 324 SUPERFAMILY SSF110849 72 150 2.14E-8 T 13-10-2018 IPR036086 ParB/Sulfiredoxin superfamily VEA_000994 1f766455a5c89798ad3e243bd6c6db7d 324 Gene3D G3DSA:1.10.10.2830 153 272 2.3E-15 T 13-10-2018 VEA_000994 1f766455a5c89798ad3e243bd6c6db7d 324 SMART SM00470 58 149 9.4E-7 T 13-10-2018 IPR003115 ParB/Sulfiredoxin VEA_000994 1f766455a5c89798ad3e243bd6c6db7d 324 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 69 227 1.9E-21 T 13-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 VEA_002904 6866e7f7bda9982ae5e6162b59ae5fa9 315 SUPERFAMILY SSF159501 32 283 8.89E-77 T 13-10-2018 VEA_002904 6866e7f7bda9982ae5e6162b59ae5fa9 315 Gene3D G3DSA:1.10.8.760 155 219 1.8E-28 T 13-10-2018 VEA_002904 6866e7f7bda9982ae5e6162b59ae5fa9 315 PIRSF PIRSF020419 1 299 5.8E-83 T 13-10-2018 IPR016773 Ferric uptake regulator, CjrA, predicted VEA_002904 6866e7f7bda9982ae5e6162b59ae5fa9 315 Gene3D G3DSA:3.40.50.11550 44 268 1.8E-28 T 13-10-2018 VEA_002904 6866e7f7bda9982ae5e6162b59ae5fa9 315 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 55 255 4.2E-61 T 13-10-2018 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN VEA_002941 0a52d1ada8c1d71ca0bb47372b51e605 144 ProDom PD087558 YRN2_VIBPA ORF2 VV1184 VV13101 MOTY 3'REGION VC1009 VP2110 1 143 1.0E-70 T 13-10-2018 IPR020206 Uncharacterised protein family, VP2110 VEA_002941 0a52d1ada8c1d71ca0bb47372b51e605 144 Pfam PF10952 Protein of unknown function (DUF2753) 5 144 2.3E-76 T 13-10-2018 IPR020206 Uncharacterised protein family, VP2110 VEA_004421 80a9a1a9f563f026099f073e9a26022f 520 PRINTS PR01806 Virulence factor MviN signature 166 187 1.9E-76 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VEA_004421 80a9a1a9f563f026099f073e9a26022f 520 PRINTS PR01806 Virulence factor MviN signature 54 70 1.9E-76 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VEA_004421 80a9a1a9f563f026099f073e9a26022f 520 PRINTS PR01806 Virulence factor MviN signature 35 54 1.9E-76 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VEA_004421 80a9a1a9f563f026099f073e9a26022f 520 PRINTS PR01806 Virulence factor MviN signature 142 166 1.9E-76 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VEA_004421 80a9a1a9f563f026099f073e9a26022f 520 PRINTS PR01806 Virulence factor MviN signature 268 294 1.9E-76 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VEA_004421 80a9a1a9f563f026099f073e9a26022f 520 PRINTS PR01806 Virulence factor MviN signature 418 435 1.9E-76 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VEA_004421 80a9a1a9f563f026099f073e9a26022f 520 PRINTS PR01806 Virulence factor MviN signature 366 385 1.9E-76 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VEA_004421 80a9a1a9f563f026099f073e9a26022f 520 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 5 476 19.717 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VEA_004421 80a9a1a9f563f026099f073e9a26022f 520 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 5 510 2.1E-135 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VEA_004421 80a9a1a9f563f026099f073e9a26022f 520 Pfam PF03023 MviN-like protein 30 476 1.4E-142 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VEA_004421 80a9a1a9f563f026099f073e9a26022f 520 PIRSF PIRSF002869 1 517 7.4E-147 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VEA_002453 8e98426ebd58f76a90a0f8bd1aa2951c 96 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 8 92 4.7E-27 T 13-10-2018 IPR005228 Conserved hypothetical protein CHP00251 VEA_002453 8e98426ebd58f76a90a0f8bd1aa2951c 96 SMART SM01152 8 84 6.2E-39 T 13-10-2018 IPR003746 Protein of unknown function DUF167 VEA_002453 8e98426ebd58f76a90a0f8bd1aa2951c 96 SUPERFAMILY SSF69786 3 96 2.75E-32 T 13-10-2018 IPR036591 YggU-like superfamily VEA_002453 8e98426ebd58f76a90a0f8bd1aa2951c 96 Hamap MF_00634 UPF0235 protein YggU [yggU]. 8 96 20.668 T 13-10-2018 IPR003746 Protein of unknown function DUF167 VEA_002453 8e98426ebd58f76a90a0f8bd1aa2951c 96 Gene3D G3DSA:3.30.1200.10 1 96 7.1E-35 T 13-10-2018 IPR036591 YggU-like superfamily VEA_002453 8e98426ebd58f76a90a0f8bd1aa2951c 96 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 12 83 1.7E-25 T 13-10-2018 IPR003746 Protein of unknown function DUF167 VEA_003996 1140477e02b6865a8853316699ae58d2 182 Gene3D G3DSA:3.40.630.30 1 178 2.0E-44 T 13-10-2018 VEA_003996 1140477e02b6865a8853316699ae58d2 182 SUPERFAMILY SSF55729 3 177 2.52E-41 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_003996 1140477e02b6865a8853316699ae58d2 182 Pfam PF13302 Acetyltransferase (GNAT) domain 11 152 3.7E-22 T 13-10-2018 IPR000182 GNAT domain VEA_002829 6e371e553fd8ec597c3133034410e3a9 710 Pfam PF00771 FHIPEP family 43 700 2.4E-270 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VEA_002829 6e371e553fd8ec597c3133034410e3a9 710 PIRSF PIRSF005419 21 710 1.8E-253 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VEA_002829 6e371e553fd8ec597c3133034410e3a9 710 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 158 181 - T 13-10-2018 IPR025505 FHIPEP conserved site VEA_002829 6e371e553fd8ec597c3133034410e3a9 710 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 33 707 6.8E-267 T 13-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 VEA_002829 6e371e553fd8ec597c3133034410e3a9 710 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 202 219 4.1E-56 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VEA_002829 6e371e553fd8ec597c3133034410e3a9 710 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 86 105 4.1E-56 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VEA_002829 6e371e553fd8ec597c3133034410e3a9 710 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 172 190 4.1E-56 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VEA_002829 6e371e553fd8ec597c3133034410e3a9 710 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 49 62 4.1E-56 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VEA_002829 6e371e553fd8ec597c3133034410e3a9 710 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 153 169 4.1E-56 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VEA_002829 6e371e553fd8ec597c3133034410e3a9 710 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 253 267 4.1E-56 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VEA_002829 6e371e553fd8ec597c3133034410e3a9 710 Gene3D G3DSA:3.40.30.60 376 519 6.5E-54 T 13-10-2018 VEA_002829 6e371e553fd8ec597c3133034410e3a9 710 Gene3D G3DSA:1.10.490.80 611 708 4.9E-15 T 13-10-2018 VEA_002829 6e371e553fd8ec597c3133034410e3a9 710 Gene3D G3DSA:1.10.8.540 520 607 1.0E-22 T 13-10-2018 VEA_000813 72a6ca77795b0184c038e7e1d3d1db7e 436 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 11 410 1.2E-104 T 13-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 VEA_000813 72a6ca77795b0184c038e7e1d3d1db7e 436 Pfam PF05525 Branched-chain amino acid transport protein 5 422 8.6E-114 T 13-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 VEA_001949 0d07023552b9ba72dbff17653b44d7b8 259 Gene3D G3DSA:3.40.50.150 57 259 1.0E-74 T 13-10-2018 VEA_001949 0d07023552b9ba72dbff17653b44d7b8 259 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 256 38.55 T 13-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 VEA_001949 0d07023552b9ba72dbff17653b44d7b8 259 Pfam PF04445 Putative SAM-dependent methyltransferase 19 255 5.4E-106 T 13-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 VEA_001949 0d07023552b9ba72dbff17653b44d7b8 259 Gene3D G3DSA:3.40.1630.10 1 56 4.0E-20 T 13-10-2018 VEA_001949 0d07023552b9ba72dbff17653b44d7b8 259 SUPERFAMILY SSF53335 4 255 2.6E-74 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_004381 26c10ab7ee7313ec34851a51f671e769 696 Gene3D G3DSA:3.30.870.10 319 499 9.0E-73 T 13-10-2018 VEA_004381 26c10ab7ee7313ec34851a51f671e769 696 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 7.3E-32 T 13-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 VEA_004381 26c10ab7ee7313ec34851a51f671e769 696 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 681 27.546 T 13-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 VEA_004381 26c10ab7ee7313ec34851a51f671e769 696 Gene3D G3DSA:1.20.58.310 9 109 1.9E-36 T 13-10-2018 VEA_004381 26c10ab7ee7313ec34851a51f671e769 696 SUPERFAMILY SSF143724 107 313 3.34E-65 T 13-10-2018 VEA_004381 26c10ab7ee7313ec34851a51f671e769 696 Pfam PF02503 Polyphosphate kinase middle domain 119 320 3.5E-48 T 13-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 VEA_004381 26c10ab7ee7313ec34851a51f671e769 696 PIRSF PIRSF015589 1 694 4.0E-254 T 13-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 VEA_004381 26c10ab7ee7313ec34851a51f671e769 696 SUPERFAMILY SSF140356 4 104 9.29E-33 T 13-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 VEA_004381 26c10ab7ee7313ec34851a51f671e769 696 SUPERFAMILY SSF56024 500 684 2.24E-69 T 13-10-2018 VEA_004381 26c10ab7ee7313ec34851a51f671e769 696 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 677 3.1E-264 T 13-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 VEA_004381 26c10ab7ee7313ec34851a51f671e769 696 Gene3D G3DSA:3.30.1840.10 110 307 1.5E-76 T 13-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 VEA_004381 26c10ab7ee7313ec34851a51f671e769 696 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 676 2.6E-144 T 13-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 VEA_004381 26c10ab7ee7313ec34851a51f671e769 696 Gene3D G3DSA:3.30.870.10 500 686 4.8E-73 T 13-10-2018 VEA_004381 26c10ab7ee7313ec34851a51f671e769 696 SUPERFAMILY SSF56024 315 496 6.59E-54 T 13-10-2018 VEA_000950 01630969fd7feb859d1ebaed180e49f9 476 TIGRFAM TIGR00775 NhaD: Na+/H+ antiporter, NhaD family 45 464 1.9E-183 T 13-10-2018 IPR004672 Na+/H+ antiporter NhaD VEA_000950 01630969fd7feb859d1ebaed180e49f9 476 Pfam PF03600 Citrate transporter 45 420 6.5E-54 T 13-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 VEA_004306 5cce126eaa362fd7f2c671a0d242c1aa 258 SUPERFAMILY SSF48150 102 242 1.52E-12 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 VEA_004306 5cce126eaa362fd7f2c671a0d242c1aa 258 Gene3D G3DSA:1.10.1670.10 182 238 1.4E-18 T 13-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 VEA_004306 5cce126eaa362fd7f2c671a0d242c1aa 258 Gene3D G3DSA:1.10.340.30 65 181 1.4E-18 T 13-10-2018 VEA_000286 c7ba896a53d2b9b5aef18918a6547670 384 Pfam PF00563 EAL domain 148 374 2.3E-62 T 13-10-2018 IPR001633 EAL domain VEA_000286 c7ba896a53d2b9b5aef18918a6547670 384 SUPERFAMILY SSF52172 4 132 8.4E-16 T 13-10-2018 IPR011006 CheY-like superfamily VEA_000286 c7ba896a53d2b9b5aef18918a6547670 384 SUPERFAMILY SSF141868 144 380 4.84E-69 T 13-10-2018 IPR035919 EAL domain superfamily VEA_000286 c7ba896a53d2b9b5aef18918a6547670 384 SMART SM00052 137 379 4.0E-63 T 13-10-2018 IPR001633 EAL domain VEA_000286 c7ba896a53d2b9b5aef18918a6547670 384 Gene3D G3DSA:3.20.20.450 139 382 2.3E-70 T 13-10-2018 IPR035919 EAL domain superfamily VEA_000286 c7ba896a53d2b9b5aef18918a6547670 384 Pfam PF00072 Response regulator receiver domain 7 119 9.1E-14 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_000286 c7ba896a53d2b9b5aef18918a6547670 384 Gene3D G3DSA:3.40.50.2300 4 134 4.8E-18 T 13-10-2018 VEA_000286 c7ba896a53d2b9b5aef18918a6547670 384 SMART SM00448 5 121 2.2E-5 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_000438 0aa1bd7cbd941a4cc4a77ef4f0c9beb3 582 PIRSF PIRSF028304 2 582 1.2E-206 T 13-10-2018 IPR010272 Type VI secretion system, TssF-like VEA_000438 0aa1bd7cbd941a4cc4a77ef4f0c9beb3 582 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 4 582 1.3E-201 T 13-10-2018 IPR010272 Type VI secretion system, TssF-like VEA_000438 0aa1bd7cbd941a4cc4a77ef4f0c9beb3 582 Pfam PF05947 Type VI secretion system, TssF 5 580 7.3E-187 T 13-10-2018 IPR010272 Type VI secretion system, TssF-like VEA_003600 f070cbef80d72081ee6bafd36ca7d333 708 SUPERFAMILY SSF48695 29 516 4.73E-72 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily VEA_003600 f070cbef80d72081ee6bafd36ca7d333 708 Gene3D G3DSA:1.10.1130.10 90 291 2.7E-17 T 13-10-2018 VEA_003600 f070cbef80d72081ee6bafd36ca7d333 708 SUPERFAMILY SSF48452 522 654 7.59E-21 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_003600 f070cbef80d72081ee6bafd36ca7d333 708 Pfam PF13435 Cytochrome c554 and c-prime 115 153 3.2E-4 T 13-10-2018 IPR023155 Cytochrome c-552/4 VEA_003600 f070cbef80d72081ee6bafd36ca7d333 708 SMART SM00028 525 558 2.4E-5 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_003600 f070cbef80d72081ee6bafd36ca7d333 708 SMART SM00028 559 592 50.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_003600 f070cbef80d72081ee6bafd36ca7d333 708 SMART SM00028 593 626 150.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_003600 f070cbef80d72081ee6bafd36ca7d333 708 Gene3D G3DSA:1.10.1130.10 303 409 2.9E-5 T 13-10-2018 VEA_003600 f070cbef80d72081ee6bafd36ca7d333 708 Pfam PF13414 TPR repeat 533 573 2.1E-7 T 13-10-2018 VEA_003600 f070cbef80d72081ee6bafd36ca7d333 708 Gene3D G3DSA:1.25.40.10 517 705 1.2E-22 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_002634 4e172c18e6033e39ea994a27a2bd6743 326 SUPERFAMILY SSF56784 107 310 7.58E-49 T 13-10-2018 IPR036412 HAD-like superfamily VEA_002634 4e172c18e6033e39ea994a27a2bd6743 326 Gene3D G3DSA:1.10.150.210 115 177 2.6E-166 T 13-10-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 VEA_002634 4e172c18e6033e39ea994a27a2bd6743 326 Gene3D G3DSA:3.30.70.2020 8 322 2.6E-166 T 13-10-2018 VEA_002634 4e172c18e6033e39ea994a27a2bd6743 326 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 102 310 2.1E-84 T 13-10-2018 VEA_002634 4e172c18e6033e39ea994a27a2bd6743 326 Pfam PF00702 haloacid dehalogenase-like hydrolase 107 279 5.3E-14 T 13-10-2018 VEA_002634 4e172c18e6033e39ea994a27a2bd6743 326 Gene3D G3DSA:3.40.50.1000 2 310 2.6E-166 T 13-10-2018 IPR023214 HAD superfamily VEA_002634 4e172c18e6033e39ea994a27a2bd6743 326 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 107 277 5.6E-28 T 13-10-2018 VEA_002598 f0e998fe2bda688dbf7a76dfc5cccd8a 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 412 425 4.7E-28 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VEA_002598 f0e998fe2bda688dbf7a76dfc5cccd8a 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 274 296 4.7E-28 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VEA_002598 f0e998fe2bda688dbf7a76dfc5cccd8a 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 333 347 4.7E-28 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VEA_002598 f0e998fe2bda688dbf7a76dfc5cccd8a 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 56 75 4.7E-28 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VEA_002598 f0e998fe2bda688dbf7a76dfc5cccd8a 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 348 362 4.7E-28 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VEA_002598 f0e998fe2bda688dbf7a76dfc5cccd8a 473 SUPERFAMILY SSF56601 30 455 6.5E-83 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VEA_002598 f0e998fe2bda688dbf7a76dfc5cccd8a 473 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 30 449 2.7E-98 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VEA_002598 f0e998fe2bda688dbf7a76dfc5cccd8a 473 Gene3D G3DSA:3.40.710.10 240 466 3.0E-52 T 13-10-2018 VEA_002598 f0e998fe2bda688dbf7a76dfc5cccd8a 473 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 53 435 4.7E-97 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VEA_002598 f0e998fe2bda688dbf7a76dfc5cccd8a 473 Gene3D G3DSA:3.50.80.20 81 173 1.6E-11 T 13-10-2018 VEA_001243 53c157547c612005462bfe6a9adaa4c5 182 Pfam PF07155 ECF-type riboflavin transporter, S component 3 171 3.5E-44 T 13-10-2018 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 VEA_001243 53c157547c612005462bfe6a9adaa4c5 182 Hamap MF_01572 UPF0397 protein . 1 182 21.28 T 13-10-2018 IPR022914 Protein of unknown function UPF0397 VEA_001243 53c157547c612005462bfe6a9adaa4c5 182 Gene3D G3DSA:1.10.1760.20 1 177 2.8E-19 T 13-10-2018 VEA_003687 73869bbab92e7a7cc3a1bc6d3f7d1eb8 337 Pfam PF01032 FecCD transport family 31 332 1.9E-78 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VEA_003687 73869bbab92e7a7cc3a1bc6d3f7d1eb8 337 Gene3D G3DSA:1.10.3470.10 11 334 8.3E-92 T 13-10-2018 IPR037294 ABC transporter, BtuC-like VEA_003687 73869bbab92e7a7cc3a1bc6d3f7d1eb8 337 SUPERFAMILY SSF81345 13 332 5.1E-77 T 13-10-2018 IPR037294 ABC transporter, BtuC-like VEA_003687 73869bbab92e7a7cc3a1bc6d3f7d1eb8 337 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 9 335 30.189 T 13-10-2018 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 VEA_002082 c951f13685c4a079ea9b2c4718718afd 151 Pfam PF07681 DoxX 27 108 3.5E-18 T 13-10-2018 IPR032808 DoxX family VEA_002387 7ffaea07364b98b796b7e8afa0b2ebe2 489 Gene3D G3DSA:3.40.1260.20 403 488 2.9E-6 T 13-10-2018 VEA_002387 7ffaea07364b98b796b7e8afa0b2ebe2 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 7.0E-173 T 13-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 VEA_002387 7ffaea07364b98b796b7e8afa0b2ebe2 489 Pfam PF10150 Ribonuclease E/G family 124 393 1.5E-104 T 13-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 VEA_002387 7ffaea07364b98b796b7e8afa0b2ebe2 489 SUPERFAMILY SSF50249 39 128 1.35E-19 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_002387 7ffaea07364b98b796b7e8afa0b2ebe2 489 Pfam PF00575 S1 RNA binding domain 38 109 5.7E-6 T 13-10-2018 IPR003029 S1 domain GO:0003676 VEA_002387 7ffaea07364b98b796b7e8afa0b2ebe2 489 SMART SM00316 37 122 5.8E-10 T 13-10-2018 IPR022967 RNA-binding domain, S1 VEA_002387 7ffaea07364b98b796b7e8afa0b2ebe2 489 Gene3D G3DSA:2.40.50.140 31 127 6.5E-32 T 13-10-2018 VEA_003881 8e8923096c87b50371a68da5b59870a6 374 SMART SM01002 149 297 3.4E-87 T 13-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VEA_003881 8e8923096c87b50371a68da5b59870a6 374 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 3.0E-155 T 13-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 VEA_003881 8e8923096c87b50371a68da5b59870a6 374 Gene3D G3DSA:3.40.50.720 3 353 7.3E-137 T 13-10-2018 VEA_003881 8e8923096c87b50371a68da5b59870a6 374 SUPERFAMILY SSF51735 137 303 3.58E-49 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_003881 8e8923096c87b50371a68da5b59870a6 374 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 2.8E-83 T 13-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VEA_003881 8e8923096c87b50371a68da5b59870a6 374 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 3.4E-46 T 13-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VEA_003881 8e8923096c87b50371a68da5b59870a6 374 PIRSF PIRSF000183 1 371 1.1E-156 T 13-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 VEA_003881 8e8923096c87b50371a68da5b59870a6 374 SUPERFAMILY SSF52283 1 360 3.4E-67 T 13-10-2018 VEA_003881 8e8923096c87b50371a68da5b59870a6 374 Gene3D G3DSA:3.40.50.720 130 305 7.3E-137 T 13-10-2018 VEA_003881 8e8923096c87b50371a68da5b59870a6 374 SMART SM01003 4 137 2.6E-79 T 13-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VEA_003221 ed71dbf710ec85501c6f37a22a58d439 209 Gene3D G3DSA:3.40.50.620 86 170 1.5E-5 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_003221 ed71dbf710ec85501c6f37a22a58d439 209 Pfam PF02698 DUF218 domain 51 171 7.3E-26 T 13-10-2018 IPR003848 Domain of unknown function DUF218 VEA_000618 5e3c6bfd085981e536895dca485a960a 451 Pfam PF00990 Diguanylate cyclase, GGDEF domain 324 412 7.4E-6 T 13-10-2018 IPR000160 GGDEF domain VEA_000618 5e3c6bfd085981e536895dca485a960a 451 SUPERFAMILY SSF55073 316 408 3.77E-5 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_001527 0f32103bb263eb764a4f5c316babbfb9 397 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 5.9E-148 T 13-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEA_001527 0f32103bb263eb764a4f5c316babbfb9 397 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 203 220 - T 13-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEA_001527 0f32103bb263eb764a4f5c316babbfb9 397 SUPERFAMILY SSF53067 5 196 1.04E-63 T 13-10-2018 VEA_001527 0f32103bb263eb764a4f5c316babbfb9 397 SUPERFAMILY SSF53067 158 396 1.2E-83 T 13-10-2018 VEA_001527 0f32103bb263eb764a4f5c316babbfb9 397 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 13-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEA_001527 0f32103bb263eb764a4f5c316babbfb9 397 Pfam PF00871 Acetokinase family 6 391 1.1E-143 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEA_001527 0f32103bb263eb764a4f5c316babbfb9 397 PRINTS PR00471 Acetate kinase family signature 173 186 1.1E-44 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEA_001527 0f32103bb263eb764a4f5c316babbfb9 397 PRINTS PR00471 Acetate kinase family signature 299 312 1.1E-44 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEA_001527 0f32103bb263eb764a4f5c316babbfb9 397 PRINTS PR00471 Acetate kinase family signature 203 224 1.1E-44 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEA_001527 0f32103bb263eb764a4f5c316babbfb9 397 PRINTS PR00471 Acetate kinase family signature 6 17 1.1E-44 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEA_001527 0f32103bb263eb764a4f5c316babbfb9 397 PRINTS PR00471 Acetate kinase family signature 378 390 1.1E-44 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEA_001527 0f32103bb263eb764a4f5c316babbfb9 397 PRINTS PR00471 Acetate kinase family signature 321 337 1.1E-44 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEA_001527 0f32103bb263eb764a4f5c316babbfb9 397 Gene3D G3DSA:3.30.420.40 196 397 2.4E-72 T 13-10-2018 VEA_001527 0f32103bb263eb764a4f5c316babbfb9 397 PIRSF PIRSF000722 2 397 1.1E-135 T 13-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEA_001527 0f32103bb263eb764a4f5c316babbfb9 397 Hamap MF_00020 Acetate kinase [ackA]. 1 397 171.916 T 13-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VEA_001527 0f32103bb263eb764a4f5c316babbfb9 397 Gene3D G3DSA:3.30.420.40 3 195 3.0E-66 T 13-10-2018 VEA_002489 44b2505fa34fa7a846eadb9bf2d9be9a 86 Pfam PF03937 Flavinator of succinate dehydrogenase 7 77 4.5E-25 T 13-10-2018 IPR005631 Flavinator of succinate dehydrogenase VEA_002489 44b2505fa34fa7a846eadb9bf2d9be9a 86 SUPERFAMILY SSF109910 2 79 1.83E-26 T 13-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily VEA_002489 44b2505fa34fa7a846eadb9bf2d9be9a 86 Gene3D G3DSA:1.10.150.250 1 86 1.7E-37 T 13-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily VEA_000047 da62de8c57d56cd1b6933fe49c7610fe 214 Gene3D G3DSA:3.90.79.10 39 210 3.4E-47 T 13-10-2018 VEA_000047 da62de8c57d56cd1b6933fe49c7610fe 214 Pfam PF00293 NUDIX domain 75 191 2.1E-16 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VEA_000047 da62de8c57d56cd1b6933fe49c7610fe 214 SUPERFAMILY SSF55811 44 212 7.45E-45 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VEA_000047 da62de8c57d56cd1b6933fe49c7610fe 214 ProSitePatterns PS00893 Nudix box signature. 111 132 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VEA_002046 2dc96a5ea30b2ec5a1f944c2a8c90e0a 334 SUPERFAMILY SSF56112 11 334 3.21E-91 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily VEA_002046 2dc96a5ea30b2ec5a1f944c2a8c90e0a 334 Hamap MF_01497 Stress response kinase A [srkA]. 10 324 46.764 T 13-10-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 VEA_002046 2dc96a5ea30b2ec5a1f944c2a8c90e0a 334 Gene3D G3DSA:3.30.200.70 19 114 2.1E-123 T 13-10-2018 VEA_002046 2dc96a5ea30b2ec5a1f944c2a8c90e0a 334 Gene3D G3DSA:1.10.510.10 66 264 2.1E-123 T 13-10-2018 VEA_002046 2dc96a5ea30b2ec5a1f944c2a8c90e0a 334 Pfam PF01636 Phosphotransferase enzyme family 41 270 3.2E-40 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase VEA_002046 2dc96a5ea30b2ec5a1f944c2a8c90e0a 334 Gene3D G3DSA:1.20.1270.170 155 313 2.1E-123 T 13-10-2018 VEA_002815 c279e20b101f839d776371e2d8b3a3fb 580 PRINTS PR01009 Flagellar M-ring protein signature 181 195 2.1E-22 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VEA_002815 c279e20b101f839d776371e2d8b3a3fb 580 PRINTS PR01009 Flagellar M-ring protein signature 224 242 2.1E-22 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VEA_002815 c279e20b101f839d776371e2d8b3a3fb 580 PRINTS PR01009 Flagellar M-ring protein signature 149 167 2.1E-22 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VEA_002815 c279e20b101f839d776371e2d8b3a3fb 580 PRINTS PR01009 Flagellar M-ring protein signature 374 398 2.1E-22 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VEA_002815 c279e20b101f839d776371e2d8b3a3fb 580 PRINTS PR01009 Flagellar M-ring protein signature 294 312 2.1E-22 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VEA_002815 c279e20b101f839d776371e2d8b3a3fb 580 Pfam PF01514 Secretory protein of YscJ/FliF family 62 248 1.8E-54 T 13-10-2018 IPR006182 Secretory protein YscJ/FliF VEA_002815 c279e20b101f839d776371e2d8b3a3fb 580 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 53 579 2.2E-72 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VEA_002815 c279e20b101f839d776371e2d8b3a3fb 580 Gene3D G3DSA:3.30.300.30 151 246 9.6E-11 T 13-10-2018 VEA_002815 c279e20b101f839d776371e2d8b3a3fb 580 Pfam PF08345 Flagellar M-ring protein C-terminal 281 451 8.6E-39 T 13-10-2018 IPR013556 Flagellar M-ring C-terminal VEA_002815 c279e20b101f839d776371e2d8b3a3fb 580 PIRSF PIRSF004862 27 580 4.5E-163 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VEA_004447 b0847ed4f3c6bcf4eefe6b6126bd16d4 477 PRINTS PR00175 Sodium/alanine symporter signature 303 321 3.8E-57 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEA_004447 b0847ed4f3c6bcf4eefe6b6126bd16d4 477 PRINTS PR00175 Sodium/alanine symporter signature 178 196 3.8E-57 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEA_004447 b0847ed4f3c6bcf4eefe6b6126bd16d4 477 PRINTS PR00175 Sodium/alanine symporter signature 350 372 3.8E-57 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEA_004447 b0847ed4f3c6bcf4eefe6b6126bd16d4 477 PRINTS PR00175 Sodium/alanine symporter signature 87 109 3.8E-57 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEA_004447 b0847ed4f3c6bcf4eefe6b6126bd16d4 477 PRINTS PR00175 Sodium/alanine symporter signature 206 225 3.8E-57 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEA_004447 b0847ed4f3c6bcf4eefe6b6126bd16d4 477 PRINTS PR00175 Sodium/alanine symporter signature 411 431 3.8E-57 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEA_004447 b0847ed4f3c6bcf4eefe6b6126bd16d4 477 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 87 102 - T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEA_004447 b0847ed4f3c6bcf4eefe6b6126bd16d4 477 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 442 2.0E-162 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEA_004447 b0847ed4f3c6bcf4eefe6b6126bd16d4 477 Pfam PF01235 Sodium:alanine symporter family 48 453 4.6E-162 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEA_002644 346ff3be0af3ae2bd153ea5deab6f7eb 487 PRINTS PR00811 Bacterial general secretion pathway protein D signature 406 420 3.3E-10 T 13-10-2018 IPR001775 GspD/PilQ family VEA_002644 346ff3be0af3ae2bd153ea5deab6f7eb 487 PRINTS PR00811 Bacterial general secretion pathway protein D signature 177 187 3.3E-10 T 13-10-2018 IPR001775 GspD/PilQ family VEA_002644 346ff3be0af3ae2bd153ea5deab6f7eb 487 PRINTS PR00811 Bacterial general secretion pathway protein D signature 383 401 3.3E-10 T 13-10-2018 IPR001775 GspD/PilQ family VEA_002644 346ff3be0af3ae2bd153ea5deab6f7eb 487 PRINTS PR00811 Bacterial general secretion pathway protein D signature 249 273 3.3E-10 T 13-10-2018 IPR001775 GspD/PilQ family VEA_002644 346ff3be0af3ae2bd153ea5deab6f7eb 487 Pfam PF04972 BON domain 100 146 5.2E-7 T 13-10-2018 IPR007055 BON domain VEA_002644 346ff3be0af3ae2bd153ea5deab6f7eb 487 Pfam PF00263 Bacterial type II and III secretion system protein 254 417 4.4E-38 T 13-10-2018 IPR004846 Type II/III secretion system GO:0009306 VEA_002644 346ff3be0af3ae2bd153ea5deab6f7eb 487 Pfam PF13629 Pilus formation protein N terminal region 27 96 7.0E-19 T 13-10-2018 IPR032789 Pilus formation protein, N-terminal VEA_001986 54f533398f65295e129779f1126f18b0 485 PIRSF PIRSF006247 1 485 2.8E-175 T 13-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 VEA_001986 54f533398f65295e129779f1126f18b0 485 Pfam PF02386 Cation transport protein 39 477 1.5E-87 T 13-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 VEA_001986 54f533398f65295e129779f1126f18b0 485 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 468 2.9E-116 T 13-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 VEA_003096 cce286ff6b94ab7177f9bdeae828b897 255 Gene3D G3DSA:3.30.460.10 7 100 9.1E-7 T 13-10-2018 VEA_003096 cce286ff6b94ab7177f9bdeae828b897 255 SUPERFAMILY SSF81301 6 71 9.81E-9 T 13-10-2018 VEA_003732 3c9038511d9e26ad0efa5a426693c999 130 Gene3D G3DSA:3.40.50.300 14 123 1.6E-10 T 13-10-2018 VEA_003732 3c9038511d9e26ad0efa5a426693c999 130 SUPERFAMILY SSF52540 20 97 9.56E-7 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003732 3c9038511d9e26ad0efa5a426693c999 130 Pfam PF03846 Cell division inhibitor SulA 15 96 7.6E-8 T 13-10-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 VEA_000178 99d19a1d8e15e63abefbffd8629bcbb4 569 SUPERFAMILY SSF53850 117 559 2.71E-62 T 13-10-2018 VEA_000178 99d19a1d8e15e63abefbffd8629bcbb4 569 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 307 3.4E-19 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain VEA_000178 99d19a1d8e15e63abefbffd8629bcbb4 569 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 119 1.1E-36 T 13-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain VEA_000178 99d19a1d8e15e63abefbffd8629bcbb4 569 Gene3D G3DSA:3.40.190.10 122 312 4.7E-39 T 13-10-2018 VEA_000670 9280e721e87be46ad6eee59ce8290161 505 SMART SM00155 399 426 2.2E-5 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VEA_000670 9280e721e87be46ad6eee59ce8290161 505 SMART SM00155 165 192 0.027 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VEA_000670 9280e721e87be46ad6eee59ce8290161 505 SUPERFAMILY SSF56024 60 237 3.36E-39 T 13-10-2018 VEA_000670 9280e721e87be46ad6eee59ce8290161 505 Gene3D G3DSA:3.30.870.10 56 254 1.3E-36 T 13-10-2018 VEA_000670 9280e721e87be46ad6eee59ce8290161 505 Pfam PF13091 PLD-like domain 78 224 2.1E-16 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VEA_000670 9280e721e87be46ad6eee59ce8290161 505 Pfam PF13091 PLD-like domain 310 449 4.3E-24 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VEA_000670 9280e721e87be46ad6eee59ce8290161 505 SUPERFAMILY SSF56024 282 462 4.71E-36 T 13-10-2018 VEA_000670 9280e721e87be46ad6eee59ce8290161 505 Gene3D G3DSA:3.30.870.10 286 467 8.2E-42 T 13-10-2018 VEA_004009 99b6e73f82c36810f8f95108c2fb3480 244 Gene3D G3DSA:3.30.1330.30 1 93 1.3E-16 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like VEA_004009 99b6e73f82c36810f8f95108c2fb3480 244 SUPERFAMILY SSF55315 4 93 1.48E-12 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like VEA_004009 99b6e73f82c36810f8f95108c2fb3480 244 Pfam PF00588 SpoU rRNA Methylase family 102 236 1.9E-30 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VEA_004009 99b6e73f82c36810f8f95108c2fb3480 244 SUPERFAMILY SSF75217 97 241 1.7E-33 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases VEA_004009 99b6e73f82c36810f8f95108c2fb3480 244 Gene3D G3DSA:3.40.1280.10 96 244 2.5E-40 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VEA_002284 5799a53a89cc6f94380ed9f72f236cbe 659 Pfam PF00005 ABC transporter 37 198 1.1E-20 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_002284 5799a53a89cc6f94380ed9f72f236cbe 659 Pfam PF00005 ABC transporter 348 479 4.8E-25 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_002284 5799a53a89cc6f94380ed9f72f236cbe 659 SUPERFAMILY SSF52540 16 278 2.42E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002284 5799a53a89cc6f94380ed9f72f236cbe 659 Gene3D G3DSA:3.40.50.300 25 293 1.4E-59 T 13-10-2018 VEA_002284 5799a53a89cc6f94380ed9f72f236cbe 659 SUPERFAMILY SSF52540 296 514 2.01E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002284 5799a53a89cc6f94380ed9f72f236cbe 659 Gene3D G3DSA:3.40.50.300 296 560 1.3E-54 T 13-10-2018 VEA_002284 5799a53a89cc6f94380ed9f72f236cbe 659 Pfam PF12848 ABC transporter 237 315 2.8E-27 T 13-10-2018 IPR032781 ABC-transporter extension domain VEA_002284 5799a53a89cc6f94380ed9f72f236cbe 659 ProSitePatterns PS00211 ABC transporters family signature. 451 465 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_002284 5799a53a89cc6f94380ed9f72f236cbe 659 SMART SM00382 46 243 1.4E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_002284 5799a53a89cc6f94380ed9f72f236cbe 659 SMART SM00382 357 523 9.9E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_002284 5799a53a89cc6f94380ed9f72f236cbe 659 ProSitePatterns PS00211 ABC transporters family signature. 170 184 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_002656 a5514c72df4f3425011df0798ac89dbc 477 PIRSF PIRSF006060 1 476 6.5E-52 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VEA_002656 a5514c72df4f3425011df0798ac89dbc 477 Gene3D G3DSA:1.20.1740.10 6 473 2.3E-9 T 13-10-2018 VEA_002656 a5514c72df4f3425011df0798ac89dbc 477 Pfam PF13520 Amino acid permease 11 443 6.2E-31 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VEA_001639 4857af88819eecd3a796d81aa1e27a11 360 Gene3D G3DSA:1.20.1090.10 160 360 3.5E-80 T 13-10-2018 VEA_001639 4857af88819eecd3a796d81aa1e27a11 360 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 348 2.6E-69 T 13-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VEA_001639 4857af88819eecd3a796d81aa1e27a11 360 Gene3D G3DSA:3.40.50.1970 3 159 1.2E-43 T 13-10-2018 VEA_001639 4857af88819eecd3a796d81aa1e27a11 360 SUPERFAMILY SSF56796 3 356 3.93E-92 T 13-10-2018 VEA_001639 4857af88819eecd3a796d81aa1e27a11 360 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 150 178 - T 13-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VEA_001639 4857af88819eecd3a796d81aa1e27a11 360 PIRSF PIRSF000112 1 360 2.0E-95 T 13-10-2018 IPR016205 Glycerol dehydrogenase GO:0016614|GO:0046872|GO:0055114 KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 VEA_001639 4857af88819eecd3a796d81aa1e27a11 360 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 241 261 - T 13-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VEA_002631 1f8fa002b7df0b06671f1ed862a866be 406 Pfam PF01676 Metalloenzyme superfamily 2 397 1.9E-40 T 13-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 VEA_002631 1f8fa002b7df0b06671f1ed862a866be 406 SUPERFAMILY SSF143856 118 234 8.76E-48 T 13-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 VEA_002631 1f8fa002b7df0b06671f1ed862a866be 406 Hamap MF_00740 Phosphopentomutase [deoB]. 1 406 53.749 T 13-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 VEA_002631 1f8fa002b7df0b06671f1ed862a866be 406 Gene3D G3DSA:3.40.720.10 3 406 7.1E-149 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VEA_002631 1f8fa002b7df0b06671f1ed862a866be 406 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 403 1.7E-174 T 13-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 VEA_002631 1f8fa002b7df0b06671f1ed862a866be 406 SUPERFAMILY SSF53649 1 406 4.71E-69 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VEA_002631 1f8fa002b7df0b06671f1ed862a866be 406 Gene3D G3DSA:3.30.70.1250 116 237 7.1E-149 T 13-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 VEA_002631 1f8fa002b7df0b06671f1ed862a866be 406 PIRSF PIRSF001491 1 406 2.3E-159 T 13-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 VEA_001233 0c1069d901ae1923da3e2f5b8cf57b69 268 SUPERFAMILY SSF141371 159 267 6.67E-31 T 13-10-2018 VEA_001233 0c1069d901ae1923da3e2f5b8cf57b69 268 Pfam PF12945 Flagellar protein YcgR 59 148 9.6E-14 T 13-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal VEA_001233 0c1069d901ae1923da3e2f5b8cf57b69 268 Gene3D G3DSA:2.30.110.10 44 157 2.2E-40 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VEA_001233 0c1069d901ae1923da3e2f5b8cf57b69 268 SUPERFAMILY SSF141371 46 158 1.73E-32 T 13-10-2018 VEA_001233 0c1069d901ae1923da3e2f5b8cf57b69 268 Pfam PF07238 PilZ domain 155 256 8.2E-15 T 13-10-2018 IPR009875 PilZ domain GO:0035438 VEA_001233 0c1069d901ae1923da3e2f5b8cf57b69 268 Gene3D G3DSA:2.40.10.220 158 268 1.2E-37 T 13-10-2018 VEA_002260 0f10f6617aa63d9f696d640676c5e883 429 PIRSF PIRSF006809 3 423 1.2E-151 T 13-10-2018 IPR016496 GTPase HflX GO:0005525 VEA_002260 0f10f6617aa63d9f696d640676c5e883 429 SUPERFAMILY SSF52540 197 372 1.39E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002260 0f10f6617aa63d9f696d640676c5e883 429 Pfam PF01926 50S ribosome-binding GTPase 200 318 2.1E-21 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 VEA_002260 0f10f6617aa63d9f696d640676c5e883 429 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 3.1E-31 T 13-10-2018 IPR025121 GTPase HflX, N-terminal VEA_002260 0f10f6617aa63d9f696d640676c5e883 429 Hamap MF_00900 GTPase HflX [hflX]. 27 390 48.327 T 13-10-2018 IPR016496 GTPase HflX GO:0005525 VEA_002260 0f10f6617aa63d9f696d640676c5e883 429 Gene3D G3DSA:3.40.50.11060 18 138 2.8E-37 T 13-10-2018 VEA_002260 0f10f6617aa63d9f696d640676c5e883 429 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 7.2E-157 T 13-10-2018 IPR016496 GTPase HflX GO:0005525 VEA_002260 0f10f6617aa63d9f696d640676c5e883 429 Gene3D G3DSA:3.40.50.300 197 371 2.8E-43 T 13-10-2018 VEA_002260 0f10f6617aa63d9f696d640676c5e883 429 SUPERFAMILY SSF54980 364 428 1.87E-19 T 13-10-2018 IPR035647 EF-G domain III/V-like VEA_002260 0f10f6617aa63d9f696d640676c5e883 429 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 1.6E-28 T 13-10-2018 IPR032305 GTP-binding protein, middle domain VEA_002260 0f10f6617aa63d9f696d640676c5e883 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 3.9E-10 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 VEA_002260 0f10f6617aa63d9f696d640676c5e883 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 3.9E-10 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 VEA_002260 0f10f6617aa63d9f696d640676c5e883 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 3.9E-10 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 VEA_004048 b5b294e880eec78feeb8fe5df4934b78 453 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 260 3.0E-85 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VEA_004048 b5b294e880eec78feeb8fe5df4934b78 453 PIRSF PIRSF006066 1 447 6.7E-138 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VEA_004048 b5b294e880eec78feeb8fe5df4934b78 453 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 437 7.4E-117 T 13-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VEA_001140 f5556f01c446db7061221d76879fa1de 239 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 40 233 1.4E-51 T 13-10-2018 IPR018635 Uncharacterised protein family UPF0319 VEA_001140 f5556f01c446db7061221d76879fa1de 239 Hamap MF_00789 UPF0319 protein YccT [yccT]. 21 238 29.315 T 13-10-2018 IPR018635 Uncharacterised protein family UPF0319 VEA_002470 5385b204e1b084083cd1c30b82e49266 652 Gene3D G3DSA:2.170.130.10 28 161 9.4E-41 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VEA_002470 5385b204e1b084083cd1c30b82e49266 652 Gene3D G3DSA:2.40.170.20 167 652 1.7E-135 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VEA_002470 5385b204e1b084083cd1c30b82e49266 652 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 40 - T 13-10-2018 IPR010916 TonB box, conserved site VEA_002470 5385b204e1b084083cd1c30b82e49266 652 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 635 652 - T 13-10-2018 IPR010917 TonB-dependent receptor, conserved site VEA_002470 5385b204e1b084083cd1c30b82e49266 652 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 156 1.0E-27 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain VEA_002470 5385b204e1b084083cd1c30b82e49266 652 SUPERFAMILY SSF56935 33 652 4.58E-128 T 13-10-2018 VEA_002470 5385b204e1b084083cd1c30b82e49266 652 Pfam PF00593 TonB dependent receptor 193 650 6.5E-61 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VEA_002245 e9ed71c612f6a1442a90fac582de5025 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 75 95 1.5E-38 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VEA_002245 e9ed71c612f6a1442a90fac582de5025 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 99 121 1.5E-38 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VEA_002245 e9ed71c612f6a1442a90fac582de5025 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 125 143 1.5E-38 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VEA_002245 e9ed71c612f6a1442a90fac582de5025 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 15 32 1.5E-38 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VEA_002245 e9ed71c612f6a1442a90fac582de5025 154 Pfam PF02556 Preprotein translocase subunit SecB 7 146 1.4E-55 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VEA_002245 e9ed71c612f6a1442a90fac582de5025 154 Hamap MF_00821 Protein-export protein SecB [secB]. 1 147 32.171 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VEA_002245 e9ed71c612f6a1442a90fac582de5025 154 SUPERFAMILY SSF54611 4 143 4.8E-52 T 13-10-2018 IPR035958 SecB-like superfamily VEA_002245 e9ed71c612f6a1442a90fac582de5025 154 Gene3D G3DSA:3.10.420.10 3 154 2.3E-58 T 13-10-2018 IPR035958 SecB-like superfamily VEA_002245 e9ed71c612f6a1442a90fac582de5025 154 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 8 146 1.2E-59 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VEA_000327 4c36f481f224aa41783369d75370a849 322 Gene3D G3DSA:1.10.10.60 271 322 2.9E-12 T 13-10-2018 VEA_000327 4c36f481f224aa41783369d75370a849 322 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 274 316 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VEA_000327 4c36f481f224aa41783369d75370a849 322 Pfam PF12833 Helix-turn-helix domain 243 320 5.0E-20 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_000327 4c36f481f224aa41783369d75370a849 322 Gene3D G3DSA:1.10.10.60 211 270 1.7E-13 T 13-10-2018 VEA_000327 4c36f481f224aa41783369d75370a849 322 SUPERFAMILY SSF46689 220 271 1.97E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_000327 4c36f481f224aa41783369d75370a849 322 SMART SM00342 237 320 1.7E-24 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_000327 4c36f481f224aa41783369d75370a849 322 SUPERFAMILY SSF46689 273 321 7.17E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_000170 b25aa3cb23f3a5e9870f20e9c86d0616 636 Pfam PF13185 GAF domain 44 143 8.2E-7 T 13-10-2018 IPR003018 GAF domain GO:0005515 VEA_000170 b25aa3cb23f3a5e9870f20e9c86d0616 636 Pfam PF00990 Diguanylate cyclase, GGDEF domain 204 357 1.1E-11 T 13-10-2018 IPR000160 GGDEF domain VEA_000170 b25aa3cb23f3a5e9870f20e9c86d0616 636 SMART SM00065 14 161 2.8E-7 T 13-10-2018 IPR003018 GAF domain GO:0005515 VEA_000170 b25aa3cb23f3a5e9870f20e9c86d0616 636 SUPERFAMILY SSF141868 377 625 1.28E-83 T 13-10-2018 IPR035919 EAL domain superfamily VEA_000170 b25aa3cb23f3a5e9870f20e9c86d0616 636 SUPERFAMILY SSF55073 209 363 3.22E-16 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_000170 b25aa3cb23f3a5e9870f20e9c86d0616 636 Gene3D G3DSA:3.30.450.40 12 166 7.8E-11 T 13-10-2018 IPR029016 GAF-like domain superfamily VEA_000170 b25aa3cb23f3a5e9870f20e9c86d0616 636 SMART SM00052 372 617 1.6E-97 T 13-10-2018 IPR001633 EAL domain VEA_000170 b25aa3cb23f3a5e9870f20e9c86d0616 636 Gene3D G3DSA:3.30.70.270 189 362 2.4E-16 T 13-10-2018 VEA_000170 b25aa3cb23f3a5e9870f20e9c86d0616 636 Pfam PF00563 EAL domain 380 612 2.8E-68 T 13-10-2018 IPR001633 EAL domain VEA_000170 b25aa3cb23f3a5e9870f20e9c86d0616 636 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 202 359 1.4E-10 T 13-10-2018 IPR000160 GGDEF domain VEA_000170 b25aa3cb23f3a5e9870f20e9c86d0616 636 SMART SM00267 192 362 6.2E-7 T 13-10-2018 IPR000160 GGDEF domain VEA_000170 b25aa3cb23f3a5e9870f20e9c86d0616 636 Gene3D G3DSA:3.20.20.450 371 629 4.7E-88 T 13-10-2018 IPR035919 EAL domain superfamily VEA_000170 b25aa3cb23f3a5e9870f20e9c86d0616 636 SUPERFAMILY SSF55781 16 164 8.63E-20 T 13-10-2018 VEA_001769 3b5c8ae94b02598ce842df1d45c9d1b9 339 Pfam PF14897 EpsG family 17 337 1.0E-19 T 13-10-2018 VEA_000299 7ba7fdf1c86eda3d85a6581eb80e82af 215 Pfam PF13505 Outer membrane protein beta-barrel domain 5 215 2.0E-17 T 13-10-2018 IPR027385 Outer membrane protein beta-barrel VEA_000299 7ba7fdf1c86eda3d85a6581eb80e82af 215 SUPERFAMILY SSF56925 20 215 2.3E-22 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VEA_000299 7ba7fdf1c86eda3d85a6581eb80e82af 215 Gene3D G3DSA:2.40.160.20 17 215 2.8E-22 T 13-10-2018 VEA_002110 f43d70d1b485740a908ae470e88fe5b6 417 Gene3D G3DSA:2.40.37.10 17 404 4.0E-153 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VEA_002110 f43d70d1b485740a908ae470e88fe5b6 417 Gene3D G3DSA:3.20.20.10 35 277 4.0E-153 T 13-10-2018 IPR029066 PLP-binding barrel VEA_002110 f43d70d1b485740a908ae470e88fe5b6 417 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 5 412 7.7E-168 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VEA_002110 f43d70d1b485740a908ae470e88fe5b6 417 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 58 76 - T 13-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site VEA_002110 f43d70d1b485740a908ae470e88fe5b6 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 90 2.3E-26 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VEA_002110 f43d70d1b485740a908ae470e88fe5b6 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 191 204 2.3E-26 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VEA_002110 f43d70d1b485740a908ae470e88fe5b6 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 370 383 2.3E-26 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VEA_002110 f43d70d1b485740a908ae470e88fe5b6 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 2.3E-26 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VEA_002110 f43d70d1b485740a908ae470e88fe5b6 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 58 76 2.3E-26 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VEA_002110 f43d70d1b485740a908ae470e88fe5b6 417 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 16 413 41.423 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VEA_002110 f43d70d1b485740a908ae470e88fe5b6 417 SUPERFAMILY SSF51419 27 284 2.04E-83 T 13-10-2018 IPR029066 PLP-binding barrel VEA_002110 f43d70d1b485740a908ae470e88fe5b6 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 380 402 7.7E-30 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VEA_002110 f43d70d1b485740a908ae470e88fe5b6 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 165 174 7.7E-30 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VEA_002110 f43d70d1b485740a908ae470e88fe5b6 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 76 93 7.7E-30 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VEA_002110 f43d70d1b485740a908ae470e88fe5b6 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 300 318 7.7E-30 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VEA_002110 f43d70d1b485740a908ae470e88fe5b6 417 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 31 370 1.6E-26 T 13-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 VEA_002110 f43d70d1b485740a908ae470e88fe5b6 417 SUPERFAMILY SSF50621 261 414 1.0E-52 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VEA_002110 f43d70d1b485740a908ae470e88fe5b6 417 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 282 1.7E-71 T 13-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 VEA_002756 40c1330a4c541cfb879f88e30a953430 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 144 5.4E-10 T 13-10-2018 IPR001451 Hexapeptide repeat VEA_002756 40c1330a4c541cfb879f88e30a953430 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 179 1.6E-7 T 13-10-2018 IPR001451 Hexapeptide repeat VEA_002756 40c1330a4c541cfb879f88e30a953430 343 SUPERFAMILY SSF51161 32 316 3.69E-83 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily VEA_002756 40c1330a4c541cfb879f88e30a953430 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 201 233 0.15 T 13-10-2018 IPR001451 Hexapeptide repeat VEA_002756 40c1330a4c541cfb879f88e30a953430 343 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 5 326 34.642 T 13-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 VEA_002756 40c1330a4c541cfb879f88e30a953430 343 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 23 88 1.3E-23 T 13-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 VEA_002756 40c1330a4c541cfb879f88e30a953430 343 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 2.4E-116 T 13-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 VEA_002756 40c1330a4c541cfb879f88e30a953430 343 Gene3D G3DSA:2.160.10.10 100 308 4.5E-63 T 13-10-2018 VEA_002756 40c1330a4c541cfb879f88e30a953430 343 Gene3D G3DSA:3.40.1390.10 1 99 4.8E-32 T 13-10-2018 VEA_000962 d821e34203c9bdd8df070bc4b27fc240 266 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 6.8E-141 T 13-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 VEA_000962 d821e34203c9bdd8df070bc4b27fc240 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 13-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 VEA_000962 d821e34203c9bdd8df070bc4b27fc240 266 Gene3D G3DSA:3.40.50.1360 1 266 1.6E-119 T 13-10-2018 VEA_000962 d821e34203c9bdd8df070bc4b27fc240 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 10 218 8.2E-21 T 13-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 VEA_000962 d821e34203c9bdd8df070bc4b27fc240 266 SUPERFAMILY SSF100950 1 263 1.44E-103 T 13-10-2018 IPR037171 NagB/RpiA transferase-like VEA_000962 d821e34203c9bdd8df070bc4b27fc240 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 41.243 T 13-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 VEA_001545 04ab3cd5dc0a91338ba8be72b777e93b 403 SUPERFAMILY SSF53901 268 400 3.25E-34 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VEA_001545 04ab3cd5dc0a91338ba8be72b777e93b 403 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 399 1.4E-121 T 13-10-2018 IPR002155 Thiolase GO:0016747 VEA_001545 04ab3cd5dc0a91338ba8be72b777e93b 403 Pfam PF00108 Thiolase, N-terminal domain 6 260 3.9E-83 T 13-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 VEA_001545 04ab3cd5dc0a91338ba8be72b777e93b 403 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 83 101 - T 13-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 VEA_001545 04ab3cd5dc0a91338ba8be72b777e93b 403 Gene3D G3DSA:3.40.47.10 7 273 1.2E-133 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VEA_001545 04ab3cd5dc0a91338ba8be72b777e93b 403 ProSitePatterns PS00099 Thiolases active site. 383 396 - T 13-10-2018 IPR020610 Thiolase, active site GO:0016747 VEA_001545 04ab3cd5dc0a91338ba8be72b777e93b 403 Pfam PF02803 Thiolase, C-terminal domain 268 400 1.3E-35 T 13-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 VEA_001545 04ab3cd5dc0a91338ba8be72b777e93b 403 Gene3D G3DSA:3.40.47.10 125 397 1.2E-133 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VEA_001545 04ab3cd5dc0a91338ba8be72b777e93b 403 SUPERFAMILY SSF53901 4 265 3.76E-75 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VEA_001545 04ab3cd5dc0a91338ba8be72b777e93b 403 PIRSF PIRSF000429 1 402 1.4E-107 T 13-10-2018 IPR002155 Thiolase GO:0016747 VEA_001962 32fc985c9573c12422b5eb55c47b054c 134 Gene3D G3DSA:1.10.3730.20 4 110 4.4E-28 T 13-10-2018 VEA_001962 32fc985c9573c12422b5eb55c47b054c 134 Pfam PF00893 Small Multidrug Resistance protein 6 94 2.1E-19 T 13-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 VEA_001962 32fc985c9573c12422b5eb55c47b054c 134 SUPERFAMILY SSF103481 6 108 4.45E-14 T 13-10-2018 VEA_002734 0c63c1d86acf0493de9fae3be56fcfb1 328 SUPERFAMILY SSF51735 1 326 7.54E-63 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_002734 0c63c1d86acf0493de9fae3be56fcfb1 328 Gene3D G3DSA:3.40.50.720 1 328 1.4E-65 T 13-10-2018 VEA_002734 0c63c1d86acf0493de9fae3be56fcfb1 328 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 226 4.1E-34 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VEA_001603 c777a4e26a38b2ac5ae605e27da50ea3 301 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 53 261 1.5E-39 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 VEA_001603 c777a4e26a38b2ac5ae605e27da50ea3 301 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 51 285 2.9E-83 T 13-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VEA_001603 c777a4e26a38b2ac5ae605e27da50ea3 301 Gene3D G3DSA:3.30.950.10 167 295 1.3E-34 T 13-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 VEA_001603 c777a4e26a38b2ac5ae605e27da50ea3 301 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 131 164 - T 13-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VEA_001603 c777a4e26a38b2ac5ae605e27da50ea3 301 Gene3D G3DSA:3.40.1010.10 49 166 5.8E-41 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 VEA_001603 c777a4e26a38b2ac5ae605e27da50ea3 301 SUPERFAMILY SSF53790 49 288 9.29E-66 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 VEA_003063 052992eb67e07643702910a493d3eaee 682 Gene3D G3DSA:3.30.450.20 56 210 2.9E-22 T 13-10-2018 VEA_003063 052992eb67e07643702910a493d3eaee 682 SMART SM00304 350 404 2.7E-6 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_003063 052992eb67e07643702910a493d3eaee 682 Gene3D G3DSA:1.10.287.950 350 682 1.5E-65 T 13-10-2018 VEA_003063 052992eb67e07643702910a493d3eaee 682 SMART SM00283 419 680 7.7E-60 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_003063 052992eb67e07643702910a493d3eaee 682 SUPERFAMILY SSF58104 372 681 3.53E-71 T 13-10-2018 VEA_003063 052992eb67e07643702910a493d3eaee 682 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 440 469 5.9E-22 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEA_003063 052992eb67e07643702910a493d3eaee 682 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 546 575 5.9E-22 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEA_003063 052992eb67e07643702910a493d3eaee 682 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 517 544 5.9E-22 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEA_003063 052992eb67e07643702910a493d3eaee 682 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 486 646 3.9E-40 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_003063 052992eb67e07643702910a493d3eaee 682 Gene3D G3DSA:3.30.450.20 52 306 2.9E-22 T 13-10-2018 VEA_000338 de3f6e0b565dad8ba6fc0780ae5aae00 305 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 246 259 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VEA_000338 de3f6e0b565dad8ba6fc0780ae5aae00 305 SUPERFAMILY SSF53613 1 302 1.54E-86 T 13-10-2018 IPR029056 Ribokinase-like VEA_000338 de3f6e0b565dad8ba6fc0780ae5aae00 305 PRINTS PR00990 Ribokinase signature 33 52 5.1E-35 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VEA_000338 de3f6e0b565dad8ba6fc0780ae5aae00 305 PRINTS PR00990 Ribokinase signature 217 228 5.1E-35 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VEA_000338 de3f6e0b565dad8ba6fc0780ae5aae00 305 PRINTS PR00990 Ribokinase signature 173 188 5.1E-35 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VEA_000338 de3f6e0b565dad8ba6fc0780ae5aae00 305 PRINTS PR00990 Ribokinase signature 6 27 5.1E-35 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VEA_000338 de3f6e0b565dad8ba6fc0780ae5aae00 305 PRINTS PR00990 Ribokinase signature 105 118 5.1E-35 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VEA_000338 de3f6e0b565dad8ba6fc0780ae5aae00 305 Gene3D G3DSA:3.40.1190.20 1 300 6.8E-107 T 13-10-2018 IPR029056 Ribokinase-like VEA_000338 de3f6e0b565dad8ba6fc0780ae5aae00 305 Pfam PF00294 pfkB family carbohydrate kinase 1 294 6.4E-76 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB VEA_000338 de3f6e0b565dad8ba6fc0780ae5aae00 305 Hamap MF_01987 Ribokinase [rbsK]. 2 301 26.445 T 13-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 VEA_000338 de3f6e0b565dad8ba6fc0780ae5aae00 305 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 5 299 3.6E-112 T 13-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 VEA_004032 4289a3cb20b970e0dee9117e9b3045b9 572 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 6 568 32.031 T 13-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 VEA_004032 4289a3cb20b970e0dee9117e9b3045b9 572 Gene3D G3DSA:3.40.50.1220 215 345 3.3E-38 T 13-10-2018 VEA_004032 4289a3cb20b970e0dee9117e9b3045b9 572 SUPERFAMILY SSF52518 385 563 1.41E-27 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VEA_004032 4289a3cb20b970e0dee9117e9b3045b9 572 PIRSF PIRSF004983 3 572 6.3E-184 T 13-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 VEA_004032 4289a3cb20b970e0dee9117e9b3045b9 572 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 13 141 1.8E-29 T 13-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VEA_004032 4289a3cb20b970e0dee9117e9b3045b9 572 Gene3D G3DSA:3.40.50.970 365 569 9.1E-49 T 13-10-2018 VEA_004032 4289a3cb20b970e0dee9117e9b3045b9 572 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 12 444 3.2E-129 T 13-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 VEA_004032 4289a3cb20b970e0dee9117e9b3045b9 572 Gene3D G3DSA:3.40.50.970 4 198 1.0E-55 T 13-10-2018 VEA_004032 4289a3cb20b970e0dee9117e9b3045b9 572 SUPERFAMILY SSF52518 9 178 1.02E-30 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VEA_004032 4289a3cb20b970e0dee9117e9b3045b9 572 Pfam PF16582 Middle domain of thiamine pyrophosphate 189 401 2.2E-36 T 13-10-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 VEA_004032 4289a3cb20b970e0dee9117e9b3045b9 572 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 426 550 4.3E-7 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VEA_002047 05a0b9e214afaff13368a6081963fd23 473 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 274 285 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VEA_002047 05a0b9e214afaff13368a6081963fd23 473 Pfam PF13746 4Fe-4S dicluster domain 222 326 2.0E-41 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEA_002047 05a0b9e214afaff13368a6081963fd23 473 SUPERFAMILY SSF54862 107 336 7.7E-33 T 13-10-2018 VEA_002047 05a0b9e214afaff13368a6081963fd23 473 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 358 470 4.0E-29 T 13-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain VEA_002047 05a0b9e214afaff13368a6081963fd23 473 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 43 471 1.2E-173 T 13-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 VEA_002047 05a0b9e214afaff13368a6081963fd23 473 Pfam PF12801 4Fe-4S binding domain 97 136 2.3E-8 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEA_002047 05a0b9e214afaff13368a6081963fd23 473 Gene3D G3DSA:2.60.40.10 357 473 5.2E-48 T 13-10-2018 IPR013783 Immunoglobulin-like fold VEA_004272 4ab36b8c32ccb872922706188922e1a1 429 PIRSF PIRSF005353 1 429 1.4E-187 T 13-10-2018 IPR026033 Purine permease PbuG-like VEA_004272 4ab36b8c32ccb872922706188922e1a1 429 Pfam PF00860 Permease family 17 391 2.0E-56 T 13-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 VEA_002219 58f73b6965af8484897cd6355cfc83cd 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 225 2.8E-21 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEA_002219 58f73b6965af8484897cd6355cfc83cd 229 SUPERFAMILY SSF52172 1 127 1.71E-39 T 13-10-2018 IPR011006 CheY-like superfamily VEA_002219 58f73b6965af8484897cd6355cfc83cd 229 Gene3D G3DSA:1.10.10.10 128 229 4.8E-29 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_002219 58f73b6965af8484897cd6355cfc83cd 229 SMART SM00862 149 225 7.0E-22 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEA_002219 58f73b6965af8484897cd6355cfc83cd 229 SUPERFAMILY SSF46894 125 226 5.95E-25 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEA_002219 58f73b6965af8484897cd6355cfc83cd 229 Gene3D G3DSA:3.40.50.2300 1 127 9.2E-37 T 13-10-2018 VEA_002219 58f73b6965af8484897cd6355cfc83cd 229 SMART SM00448 2 111 2.1E-43 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_002219 58f73b6965af8484897cd6355cfc83cd 229 Pfam PF00072 Response regulator receiver domain 4 112 1.5E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_003261 eeb5ec9f25c993909a9d07d43e40aa75 85 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 72 6.1E-15 T 13-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM VEA_003261 eeb5ec9f25c993909a9d07d43e40aa75 85 SUPERFAMILY SSF143120 1 75 2.53E-16 T 13-10-2018 IPR036165 YefM-like superfamily VEA_003261 eeb5ec9f25c993909a9d07d43e40aa75 85 Gene3D G3DSA:3.40.1620.10 1 40 1.1E-5 T 13-10-2018 VEA_003261 eeb5ec9f25c993909a9d07d43e40aa75 85 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 5 53 2.1E-10 T 13-10-2018 VEA_003254 f8761288d05d214bcf9f13792098502e 113 SUPERFAMILY SSF55729 4 101 3.66E-17 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_003254 f8761288d05d214bcf9f13792098502e 113 Pfam PF13673 Acetyltransferase (GNAT) domain 5 104 5.8E-11 T 13-10-2018 IPR000182 GNAT domain VEA_003254 f8761288d05d214bcf9f13792098502e 113 Gene3D G3DSA:3.40.630.30 2 105 9.7E-18 T 13-10-2018 VEA_004115 49722a868832e21c0ea73e2b101e0422 114 SUPERFAMILY SSF81343 4 113 1.64E-25 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEA_004115 49722a868832e21c0ea73e2b101e0422 114 PIRSF PIRSF000169 1 114 1.1E-37 T 13-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 VEA_004115 49722a868832e21c0ea73e2b101e0422 114 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 112 1.0E-34 T 13-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 VEA_004115 49722a868832e21c0ea73e2b101e0422 114 Gene3D G3DSA:1.20.1300.10 1 114 1.5E-27 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEA_000457 08700f731587d018ea6a33f8599aeed4 325 SUPERFAMILY SSF51261 60 289 2.3E-49 T 13-10-2018 IPR011055 Duplicated hybrid motif VEA_000457 08700f731587d018ea6a33f8599aeed4 325 Gene3D G3DSA:3.10.450.350 60 159 3.6E-6 T 13-10-2018 VEA_000457 08700f731587d018ea6a33f8599aeed4 325 Pfam PF01551 Peptidase family M23 191 284 3.0E-29 T 13-10-2018 IPR016047 Peptidase M23 VEA_000457 08700f731587d018ea6a33f8599aeed4 325 Gene3D G3DSA:2.70.70.10 164 288 7.0E-40 T 13-10-2018 IPR011055 Duplicated hybrid motif VEA_003109 06adc10c95cab675a02a2756dc8b1155 760 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VEA_003109 06adc10c95cab675a02a2756dc8b1155 760 SUPERFAMILY SSF48168 10 221 3.01E-74 T 13-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VEA_003109 06adc10c95cab675a02a2756dc8b1155 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 1.6E-37 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VEA_003109 06adc10c95cab675a02a2756dc8b1155 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 1.6E-37 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VEA_003109 06adc10c95cab675a02a2756dc8b1155 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 1.6E-37 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VEA_003109 06adc10c95cab675a02a2756dc8b1155 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 1.6E-37 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VEA_003109 06adc10c95cab675a02a2756dc8b1155 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 1.6E-37 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VEA_003109 06adc10c95cab675a02a2756dc8b1155 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 1.6E-37 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VEA_003109 06adc10c95cab675a02a2756dc8b1155 760 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 142 219 2.3E-11 T 13-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VEA_003109 06adc10c95cab675a02a2756dc8b1155 760 SUPERFAMILY SSF51998 222 739 2.35E-165 T 13-10-2018 VEA_003109 06adc10c95cab675a02a2756dc8b1155 760 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 1.3E-175 T 13-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VEA_003109 06adc10c95cab675a02a2756dc8b1155 760 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 1.1E-121 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VEA_003109 06adc10c95cab675a02a2756dc8b1155 760 Gene3D G3DSA:3.20.70.20 78 742 1.4E-156 T 13-10-2018 VEA_003109 06adc10c95cab675a02a2756dc8b1155 760 Pfam PF03477 ATP cone domain 6 92 1.2E-18 T 13-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 VEA_002218 997674b78aeff55fb5a39d6a383155ef 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 417 7.8E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_002218 997674b78aeff55fb5a39d6a383155ef 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 442 7.8E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_002218 997674b78aeff55fb5a39d6a383155ef 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 448 461 7.8E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_002218 997674b78aeff55fb5a39d6a383155ef 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 403 7.8E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_002218 997674b78aeff55fb5a39d6a383155ef 464 SUPERFAMILY SSF47384 234 310 6.67E-14 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEA_002218 997674b78aeff55fb5a39d6a383155ef 464 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 41 172 9.3E-58 T 13-10-2018 IPR032404 Two-component sensor protein CpxA, periplasmic domain VEA_002218 997674b78aeff55fb5a39d6a383155ef 464 SMART SM00388 248 310 1.8E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_002218 997674b78aeff55fb5a39d6a383155ef 464 SMART SM00387 354 464 1.0E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_002218 997674b78aeff55fb5a39d6a383155ef 464 Pfam PF00512 His Kinase A (phospho-acceptor) domain 249 309 1.6E-11 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_002218 997674b78aeff55fb5a39d6a383155ef 464 Gene3D G3DSA:1.10.287.130 198 311 9.7E-34 T 13-10-2018 VEA_002218 997674b78aeff55fb5a39d6a383155ef 464 Gene3D G3DSA:3.30.565.10 313 463 2.9E-36 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_002218 997674b78aeff55fb5a39d6a383155ef 464 Pfam PF00672 HAMP domain 195 242 7.2E-9 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_002218 997674b78aeff55fb5a39d6a383155ef 464 SUPERFAMILY SSF55874 300 462 2.62E-34 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_002218 997674b78aeff55fb5a39d6a383155ef 464 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 461 9.0E-19 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_002218 997674b78aeff55fb5a39d6a383155ef 464 Gene3D G3DSA:3.30.450.210 36 161 1.6E-54 T 13-10-2018 IPR038515 CpxA, periplasmic domain superfamily VEA_002218 997674b78aeff55fb5a39d6a383155ef 464 SMART SM00304 194 247 2.6E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_001893 2d6c56dada880988874a2f49e34b28f7 307 Gene3D G3DSA:2.30.42.10 204 307 7.2E-26 T 13-10-2018 VEA_001893 2d6c56dada880988874a2f49e34b28f7 307 ProSitePatterns PS01141 Bacterial type II secretion system protein C signature. 245 271 - T 13-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 VEA_001893 2d6c56dada880988874a2f49e34b28f7 307 Pfam PF11356 Type II secretion system protein C 37 177 7.3E-44 T 13-10-2018 IPR024961 Type II secretion system protein C, N-terminal VEA_001893 2d6c56dada880988874a2f49e34b28f7 307 SUPERFAMILY SSF50156 211 307 7.36E-19 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 VEA_001893 2d6c56dada880988874a2f49e34b28f7 307 Gene3D G3DSA:2.30.30.830 111 178 2.2E-28 T 13-10-2018 VEA_001893 2d6c56dada880988874a2f49e34b28f7 307 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 34 307 1.2E-73 T 13-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 VEA_000723 ead2c4041bf61ccee63dc0d3d6b3087d 96 Gene3D G3DSA:2.30.33.40 1 96 8.5E-33 T 13-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 VEA_000723 ead2c4041bf61ccee63dc0d3d6b3087d 96 PRINTS PR00297 10kDa chaperonin signature 82 95 1.1E-24 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VEA_000723 ead2c4041bf61ccee63dc0d3d6b3087d 96 PRINTS PR00297 10kDa chaperonin signature 60 72 1.1E-24 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VEA_000723 ead2c4041bf61ccee63dc0d3d6b3087d 96 PRINTS PR00297 10kDa chaperonin signature 3 18 1.1E-24 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VEA_000723 ead2c4041bf61ccee63dc0d3d6b3087d 96 PRINTS PR00297 10kDa chaperonin signature 25 46 1.1E-24 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VEA_000723 ead2c4041bf61ccee63dc0d3d6b3087d 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 22.605 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VEA_000723 ead2c4041bf61ccee63dc0d3d6b3087d 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 13-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 VEA_000723 ead2c4041bf61ccee63dc0d3d6b3087d 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 1.8E-29 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VEA_000723 ead2c4041bf61ccee63dc0d3d6b3087d 96 SUPERFAMILY SSF50129 1 96 1.08E-27 T 13-10-2018 IPR011032 GroES-like superfamily VEA_000723 ead2c4041bf61ccee63dc0d3d6b3087d 96 SMART SM00883 2 95 1.7E-40 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VEA_001621 82b2ecb72009aa2f24cf802a13d14316 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.588 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001621 82b2ecb72009aa2f24cf802a13d14316 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 13-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_001621 82b2ecb72009aa2f24cf802a13d14316 71 Pfam PF01165 Ribosomal protein S21 4 56 4.3E-23 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001621 82b2ecb72009aa2f24cf802a13d14316 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 44 2.0E-10 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001621 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.6E-16 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001621 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.6E-16 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001621 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.6E-16 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001621 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.6E-16 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001621 82b2ecb72009aa2f24cf802a13d14316 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 7.2E-25 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001621 82b2ecb72009aa2f24cf802a13d14316 71 Gene3D G3DSA:1.20.5.1150 16 54 1.4E-21 T 13-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002300 384127ef21fb034149cee3d7cae35582 394 Gene3D G3DSA:2.40.30.10 338 393 8.1E-30 T 13-10-2018 VEA_002300 384127ef21fb034149cee3d7cae35582 394 SUPERFAMILY SSF52540 6 219 1.37E-60 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002300 384127ef21fb034149cee3d7cae35582 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site VEA_002300 384127ef21fb034149cee3d7cae35582 394 Gene3D G3DSA:3.40.50.300 1 203 1.4E-69 T 13-10-2018 VEA_002300 384127ef21fb034149cee3d7cae35582 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 5.2E-14 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VEA_002300 384127ef21fb034149cee3d7cae35582 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.421 T 13-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VEA_002300 384127ef21fb034149cee3d7cae35582 394 SUPERFAMILY SSF50447 205 301 3.73E-29 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VEA_002300 384127ef21fb034149cee3d7cae35582 394 Gene3D G3DSA:2.40.30.10 206 334 2.8E-52 T 13-10-2018 VEA_002300 384127ef21fb034149cee3d7cae35582 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 1.0E-15 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VEA_002300 384127ef21fb034149cee3d7cae35582 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 9.3E-34 T 13-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal VEA_002300 384127ef21fb034149cee3d7cae35582 394 SUPERFAMILY SSF50465 298 393 1.96E-35 T 13-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VEA_002300 384127ef21fb034149cee3d7cae35582 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 1.3E-230 T 13-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VEA_002300 384127ef21fb034149cee3d7cae35582 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.7E-23 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_002300 384127ef21fb034149cee3d7cae35582 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.7E-23 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_002300 384127ef21fb034149cee3d7cae35582 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-23 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_002300 384127ef21fb034149cee3d7cae35582 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.7E-23 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_002300 384127ef21fb034149cee3d7cae35582 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.7E-23 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_002300 384127ef21fb034149cee3d7cae35582 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 5.5E-58 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_001739 599e1418f6d19132501fc30f48683fb5 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 46.639 T 13-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 VEA_001739 599e1418f6d19132501fc30f48683fb5 274 Gene3D G3DSA:2.40.50.140 1 114 1.4E-49 T 13-10-2018 VEA_001739 599e1418f6d19132501fc30f48683fb5 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 1.8E-55 T 13-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 VEA_001739 599e1418f6d19132501fc30f48683fb5 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 13-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001739 599e1418f6d19132501fc30f48683fb5 274 SUPERFAMILY SSF50104 127 272 1.14E-60 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily VEA_001739 599e1418f6d19132501fc30f48683fb5 274 Gene3D G3DSA:2.30.30.30 115 195 7.5E-33 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 VEA_001739 599e1418f6d19132501fc30f48683fb5 274 PIRSF PIRSF002158 13 274 8.4E-99 T 13-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_001739 599e1418f6d19132501fc30f48683fb5 274 SUPERFAMILY SSF50249 2 125 3.77E-49 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_001739 599e1418f6d19132501fc30f48683fb5 274 SMART SM01383 42 118 9.5E-44 T 13-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_001739 599e1418f6d19132501fc30f48683fb5 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 3.8E-32 T 13-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_001739 599e1418f6d19132501fc30f48683fb5 274 Gene3D G3DSA:4.10.950.10 196 274 1.5E-35 T 13-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001739 599e1418f6d19132501fc30f48683fb5 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 7.9E-129 T 13-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 VEA_001739 599e1418f6d19132501fc30f48683fb5 274 SMART SM01382 124 252 5.5E-91 T 13-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 VEA_004501 6f7a8be199a58f766656e51df8b4bc39 555 Gene3D G3DSA:3.40.50.2300 213 548 9.1E-65 T 13-10-2018 VEA_004501 6f7a8be199a58f766656e51df8b4bc39 555 Pfam PF04348 LppC putative lipoprotein 3 551 1.4E-159 T 13-10-2018 IPR007443 Penicillin-binding protein activator LpoA VEA_004501 6f7a8be199a58f766656e51df8b4bc39 555 Gene3D G3DSA:1.25.40.10 1 98 2.4E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_004501 6f7a8be199a58f766656e51df8b4bc39 555 Gene3D G3DSA:3.40.50.2300 321 549 9.1E-65 T 13-10-2018 VEA_004501 6f7a8be199a58f766656e51df8b4bc39 555 Gene3D G3DSA:1.25.40.650 101 206 5.4E-17 T 13-10-2018 VEA_004501 6f7a8be199a58f766656e51df8b4bc39 555 SUPERFAMILY SSF53822 212 551 9.89E-70 T 13-10-2018 IPR028082 Periplasmic binding protein-like I VEA_001569 4ee426131d4045a4b834f9b7b276d87c 331 Gene3D G3DSA:3.40.190.10 28 319 1.1E-33 T 13-10-2018 VEA_001569 4ee426131d4045a4b834f9b7b276d87c 331 SUPERFAMILY SSF53850 22 326 7.6E-65 T 13-10-2018 VEA_001569 4ee426131d4045a4b834f9b7b276d87c 331 Gene3D G3DSA:3.40.190.100 112 245 1.1E-33 T 13-10-2018 VEA_001569 4ee426131d4045a4b834f9b7b276d87c 331 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 27 303 8.9E-56 T 13-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 VEA_000248 af9875288d2056e8738cd82a4cf65aab 135 SUPERFAMILY SSF46955 1 122 1.61E-23 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily VEA_000248 af9875288d2056e8738cd82a4cf65aab 135 Gene3D G3DSA:1.10.1660.10 1 119 1.2E-24 T 13-10-2018 VEA_000248 af9875288d2056e8738cd82a4cf65aab 135 SMART SM00422 1 69 5.4E-12 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEA_000248 af9875288d2056e8738cd82a4cf65aab 135 Pfam PF13411 MerR HTH family regulatory protein 1 68 9.1E-12 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEA_001345 00d84ac03b434a3a79fd37970f2205db 369 Pfam PF01553 Acyltransferase 92 194 1.1E-9 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VEA_001345 00d84ac03b434a3a79fd37970f2205db 369 SUPERFAMILY SSF69593 89 297 4.05E-9 T 13-10-2018 VEA_002039 b00dd5cd5ed0c70ee590eb6539765052 312 Gene3D G3DSA:3.30.470.10 10 127 2.2E-106 T 13-10-2018 VEA_002039 b00dd5cd5ed0c70ee590eb6539765052 312 Pfam PF01063 Amino-transferase class IV 36 268 2.4E-45 T 13-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 VEA_002039 b00dd5cd5ed0c70ee590eb6539765052 312 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 223 - T 13-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 VEA_002039 b00dd5cd5ed0c70ee590eb6539765052 312 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 10 307 4.1E-142 T 13-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 VEA_002039 b00dd5cd5ed0c70ee590eb6539765052 312 Gene3D G3DSA:3.20.10.10 138 289 2.2E-106 T 13-10-2018 VEA_002039 b00dd5cd5ed0c70ee590eb6539765052 312 SUPERFAMILY SSF56752 7 307 1.16E-102 T 13-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 VEA_000010 d99ee6081209579723424c4ec5932b57 111 SUPERFAMILY SSF47226 1 110 2.36E-17 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 VEA_000010 d99ee6081209579723424c4ec5932b57 111 Gene3D G3DSA:1.20.120.160 1 111 1.5E-12 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 VEA_004004 2eddef22c06175fd784c86229b680601 663 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 470 629 2.0E-43 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_004004 2eddef22c06175fd784c86229b680601 663 Gene3D G3DSA:1.10.287.950 334 663 6.3E-71 T 13-10-2018 VEA_004004 2eddef22c06175fd784c86229b680601 663 SMART SM00283 401 662 2.1E-75 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_004004 2eddef22c06175fd784c86229b680601 663 SUPERFAMILY SSF58104 354 663 3.14E-73 T 13-10-2018 VEA_004004 2eddef22c06175fd784c86229b680601 663 SMART SM00304 334 386 1.9E-5 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_004004 2eddef22c06175fd784c86229b680601 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 528 557 5.5E-6 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEA_004004 2eddef22c06175fd784c86229b680601 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 415 444 5.5E-6 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEA_002848 d26ae630a3adaad0a4e19d778ae6542e 161 Gene3D G3DSA:1.10.8.640 20 105 1.6E-36 T 13-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily VEA_002848 d26ae630a3adaad0a4e19d778ae6542e 161 Pfam PF03918 Cytochrome C biogenesis protein 9 152 2.0E-55 T 13-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family VEA_004185 43b717011ea4c540b8beb3699c6fae66 197 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 22 191 2.9E-31 T 13-10-2018 IPR018635 Uncharacterised protein family UPF0319 VEA_004185 43b717011ea4c540b8beb3699c6fae66 197 Hamap MF_00789 UPF0319 protein YccT [yccT]. 3 194 24.323 T 13-10-2018 IPR018635 Uncharacterised protein family UPF0319 VEA_000278 b12273eba824006cd722d8fcd8e1fefb 301 Pfam PF00892 EamA-like transporter family 7 141 1.1E-12 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEA_000278 b12273eba824006cd722d8fcd8e1fefb 301 SUPERFAMILY SSF103481 190 285 1.03E-6 T 13-10-2018 VEA_000278 b12273eba824006cd722d8fcd8e1fefb 301 SUPERFAMILY SSF103481 63 143 1.02E-10 T 13-10-2018 VEA_000278 b12273eba824006cd722d8fcd8e1fefb 301 TIGRFAM TIGR00688 rarD: protein RarD 7 259 3.9E-49 T 13-10-2018 IPR004626 RarD protein GO:0005887 VEA_000516 4feb8da6f298e30394b37eecab3b4b6c 44 Pfam PF09574 Protein of unknown function (Duf2374) 1 42 3.4E-26 T 13-10-2018 IPR014175 Conserved hypothetical protein CHP02808 VEA_000516 4feb8da6f298e30394b37eecab3b4b6c 44 TIGRFAM TIGR02808 short_TIGR02808: TIGR02808 family protein 1 42 8.4E-26 T 13-10-2018 IPR014175 Conserved hypothetical protein CHP02808 VEA_000664 ac0a8553eb3bf9a9918596d0cb0287cd 262 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 261 1.6E-16 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_000664 ac0a8553eb3bf9a9918596d0cb0287cd 262 Gene3D G3DSA:1.10.3720.10 2 255 1.6E-39 T 13-10-2018 IPR035906 MetI-like superfamily VEA_000664 ac0a8553eb3bf9a9918596d0cb0287cd 262 SUPERFAMILY SSF161098 12 258 4.58E-44 T 13-10-2018 IPR035906 MetI-like superfamily VEA_001731 26bcca270fcfc63981ecf56ff9520e41 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 102 9.9E-24 T 13-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001731 26bcca270fcfc63981ecf56ff9520e41 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 7.1E-40 T 13-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001731 26bcca270fcfc63981ecf56ff9520e41 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 13-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_001731 26bcca270fcfc63981ecf56ff9520e41 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 20.099 T 13-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001731 26bcca270fcfc63981ecf56ff9520e41 105 Pfam PF00467 KOW motif 8 37 7.8E-6 T 13-10-2018 IPR005824 KOW VEA_001731 26bcca270fcfc63981ecf56ff9520e41 105 Gene3D G3DSA:2.30.30.30 2 104 5.8E-40 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 VEA_001731 26bcca270fcfc63981ecf56ff9520e41 105 SUPERFAMILY SSF50104 4 101 3.74E-34 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily VEA_001731 26bcca270fcfc63981ecf56ff9520e41 105 SMART SM00739 4 31 3.4E-4 T 13-10-2018 IPR005824 KOW VEA_000671 146e2dbfcbaf751b7193bf819ac5ef0e 195 Gene3D G3DSA:3.40.50.150 2 195 5.6E-24 T 13-10-2018 VEA_000671 146e2dbfcbaf751b7193bf819ac5ef0e 195 Pfam PF13649 Methyltransferase domain 36 126 1.4E-10 T 13-10-2018 VEA_000671 146e2dbfcbaf751b7193bf819ac5ef0e 195 SUPERFAMILY SSF53335 4 187 4.9E-25 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_001485 54f4c03876ee53503c2bb787e9caba96 71 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 15 68 1.0E-12 T 13-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor VEA_001485 54f4c03876ee53503c2bb787e9caba96 71 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 4 68 2.1E-30 T 13-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor VEA_003415 ee341f10e22b1012278c69309b78f88a 365 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 173 357 1.6E-22 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_003415 ee341f10e22b1012278c69309b78f88a 365 Gene3D G3DSA:1.10.3720.10 148 363 3.2E-48 T 13-10-2018 IPR035906 MetI-like superfamily VEA_003415 ee341f10e22b1012278c69309b78f88a 365 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 155 251 2.1E-22 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VEA_003415 ee341f10e22b1012278c69309b78f88a 365 SUPERFAMILY SSF161098 154 346 6.67E-41 T 13-10-2018 IPR035906 MetI-like superfamily VEA_000497 13b66ae78fd823d7e82f95ec73b781b0 390 SUPERFAMILY SSF103473 2 381 3.79E-44 T 13-10-2018 IPR036259 MFS transporter superfamily VEA_000497 13b66ae78fd823d7e82f95ec73b781b0 390 Gene3D G3DSA:1.20.1250.20 1 384 1.1E-41 T 13-10-2018 VEA_000497 13b66ae78fd823d7e82f95ec73b781b0 390 Pfam PF07690 Major Facilitator Superfamily 9 239 1.3E-17 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEA_000497 13b66ae78fd823d7e82f95ec73b781b0 390 Pfam PF07690 Major Facilitator Superfamily 251 379 2.6E-14 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEA_001084 4793fee17d644eea75c1595300d64f67 423 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 30 418 0.0 T 13-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 VEA_001084 4793fee17d644eea75c1595300d64f67 423 Pfam PF02264 LamB porin 25 423 1.4E-125 T 13-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 VEA_001084 4793fee17d644eea75c1595300d64f67 423 SUPERFAMILY SSF56935 23 423 1.72E-132 T 13-10-2018 VEA_001084 4793fee17d644eea75c1595300d64f67 423 Hamap MF_01301 Maltoporin [lamB]. 1 423 47.122 T 13-10-2018 IPR023738 Maltoporin GO:0009279|GO:0015481|GO:0015768|GO:0042956|GO:0042958 VEA_001084 4793fee17d644eea75c1595300d64f67 423 Gene3D G3DSA:2.40.170.10 23 423 3.2E-136 T 13-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 VEA_004385 3e842ac2c5f29c5132ba6842deeeb55a 229 SUPERFAMILY SSF52172 3 184 3.02E-43 T 13-10-2018 IPR011006 CheY-like superfamily VEA_004385 3e842ac2c5f29c5132ba6842deeeb55a 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 5.2E-113 T 13-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 VEA_004385 3e842ac2c5f29c5132ba6842deeeb55a 229 Gene3D G3DSA:1.10.10.10 127 228 4.9E-40 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_004385 3e842ac2c5f29c5132ba6842deeeb55a 229 Pfam PF00072 Response regulator receiver domain 5 116 1.2E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_004385 3e842ac2c5f29c5132ba6842deeeb55a 229 SMART SM00448 3 116 1.9E-45 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_004385 3e842ac2c5f29c5132ba6842deeeb55a 229 Gene3D G3DSA:3.40.50.2300 1 126 9.5E-39 T 13-10-2018 VEA_004385 3e842ac2c5f29c5132ba6842deeeb55a 229 SMART SM00862 150 225 1.8E-27 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEA_004385 3e842ac2c5f29c5132ba6842deeeb55a 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 225 5.7E-28 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEA_001839 61b306af4f1fe5d6c300eed1139e956e 186 Pfam PF00589 Phage integrase family 33 170 8.9E-15 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VEA_001839 61b306af4f1fe5d6c300eed1139e956e 186 SUPERFAMILY SSF56349 23 179 5.3E-28 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VEA_001839 61b306af4f1fe5d6c300eed1139e956e 186 Gene3D G3DSA:1.10.443.10 10 184 1.1E-24 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VEA_004334 d6e71c076c0115bda166acbde50f9d5c 534 TIGRFAM TIGR02783 TrbL_P: P-type conjugative transfer protein TrbL 27 335 3.5E-72 T 13-10-2018 IPR014150 Conjugal transfer, TrbL VEA_004334 d6e71c076c0115bda166acbde50f9d5c 534 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 63 276 2.7E-38 T 13-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 VEA_002071 4d03fd1337a5710c390096ce0b62d6a5 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 9 120 1.6E-23 T 13-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 VEA_002071 4d03fd1337a5710c390096ce0b62d6a5 127 TIGRFAM TIGR00494 crcB: protein CrcB 10 123 6.8E-29 T 13-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 VEA_002071 4d03fd1337a5710c390096ce0b62d6a5 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 7 125 18.608 T 13-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 VEA_003312 ca97f750e0da612da96aa040178708ff 305 Pfam PF03466 LysR substrate binding domain 94 257 4.7E-16 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_003312 ca97f750e0da612da96aa040178708ff 305 SUPERFAMILY SSF53850 94 278 1.39E-15 T 13-10-2018 VEA_003312 ca97f750e0da612da96aa040178708ff 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.2E-13 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_003312 ca97f750e0da612da96aa040178708ff 305 Gene3D G3DSA:3.40.190.290 94 266 8.3E-17 T 13-10-2018 VEA_003312 ca97f750e0da612da96aa040178708ff 305 Gene3D G3DSA:1.10.10.10 1 85 1.1E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_003312 ca97f750e0da612da96aa040178708ff 305 SUPERFAMILY SSF46785 2 79 1.03E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_002654 712e9863ed12216b08f43d78275a0461 379 Pfam PF02417 Chromate transporter 3 168 2.0E-33 T 13-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 VEA_002654 712e9863ed12216b08f43d78275a0461 379 Pfam PF02417 Chromate transporter 212 373 4.6E-34 T 13-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 VEA_002654 712e9863ed12216b08f43d78275a0461 379 TIGRFAM TIGR00937 2A51: chromate efflux transporter 8 369 1.2E-90 T 13-10-2018 IPR014047 Chromate transporter, long chain VEA_002654 712e9863ed12216b08f43d78275a0461 379 PIRSF PIRSF004810 1 379 1.3E-114 T 13-10-2018 IPR014047 Chromate transporter, long chain VEA_003484 bf64c74a089ffe0b51998b4435ce9008 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 203 222 5.3E-69 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEA_003484 bf64c74a089ffe0b51998b4435ce9008 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 91 104 5.3E-69 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEA_003484 bf64c74a089ffe0b51998b4435ce9008 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 5.3E-69 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEA_003484 bf64c74a089ffe0b51998b4435ce9008 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 75 89 5.3E-69 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEA_003484 bf64c74a089ffe0b51998b4435ce9008 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 166 185 5.3E-69 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEA_003484 bf64c74a089ffe0b51998b4435ce9008 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 122 138 5.3E-69 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEA_003484 bf64c74a089ffe0b51998b4435ce9008 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 247 266 5.3E-69 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEA_003484 bf64c74a089ffe0b51998b4435ce9008 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 5.3E-69 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEA_003484 bf64c74a089ffe0b51998b4435ce9008 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 148 162 5.3E-69 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEA_003484 bf64c74a089ffe0b51998b4435ce9008 343 Gene3D G3DSA:3.40.190.10 132 335 2.3E-106 T 13-10-2018 VEA_003484 bf64c74a089ffe0b51998b4435ce9008 343 SUPERFAMILY SSF53850 26 339 1.44E-84 T 13-10-2018 VEA_003484 bf64c74a089ffe0b51998b4435ce9008 343 Pfam PF13416 Bacterial extracellular solute-binding protein 42 301 1.1E-36 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein VEA_003484 bf64c74a089ffe0b51998b4435ce9008 343 PIRSF PIRSF019574 1 343 1.2E-109 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEA_003484 bf64c74a089ffe0b51998b4435ce9008 343 Gene3D G3DSA:3.40.190.10 32 306 2.3E-106 T 13-10-2018 VEA_001982 364b187ae6ab394892e0ad465f9df5d7 83 Pfam PF04380 Membrane fusogenic activity 1 78 1.8E-27 T 13-10-2018 IPR007475 Membrane fusogenic activity VEA_003424 8c0864b2cd86e27e5fda0cad11ddf989 277 PIRSF PIRSF012524 1 277 4.3E-97 T 13-10-2018 IPR014464 Conserved virulence factor B VEA_003424 8c0864b2cd86e27e5fda0cad11ddf989 277 Gene3D G3DSA:1.10.10.10 215 277 3.3E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_003424 8c0864b2cd86e27e5fda0cad11ddf989 277 SMART SM00316 69 132 2.2 T 13-10-2018 IPR022967 RNA-binding domain, S1 VEA_003424 8c0864b2cd86e27e5fda0cad11ddf989 277 SMART SM00316 3 64 18.0 T 13-10-2018 IPR022967 RNA-binding domain, S1 VEA_003424 8c0864b2cd86e27e5fda0cad11ddf989 277 SMART SM00316 145 207 5.3 T 13-10-2018 IPR022967 RNA-binding domain, S1 VEA_003424 8c0864b2cd86e27e5fda0cad11ddf989 277 Pfam PF13509 S1 domain 4 63 5.4E-25 T 13-10-2018 IPR039566 Conserved virulence factor B, S1 domain VEA_003424 8c0864b2cd86e27e5fda0cad11ddf989 277 Pfam PF13509 S1 domain 71 132 1.2E-4 T 13-10-2018 IPR039566 Conserved virulence factor B, S1 domain VEA_003017 59e3ac41c6ae7dac86f08d7e8510b759 248 Pfam PF00106 short chain dehydrogenase 13 208 2.1E-54 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_003017 59e3ac41c6ae7dac86f08d7e8510b759 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VEA_003017 59e3ac41c6ae7dac86f08d7e8510b759 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 178 0.0083 T 13-10-2018 VEA_003017 59e3ac41c6ae7dac86f08d7e8510b759 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 4.4E-26 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_003017 59e3ac41c6ae7dac86f08d7e8510b759 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 4.4E-26 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_003017 59e3ac41c6ae7dac86f08d7e8510b759 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 4.4E-26 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_003017 59e3ac41c6ae7dac86f08d7e8510b759 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 4.4E-26 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_003017 59e3ac41c6ae7dac86f08d7e8510b759 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 4.4E-26 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_003017 59e3ac41c6ae7dac86f08d7e8510b759 248 Gene3D G3DSA:3.40.50.720 1 246 8.8E-72 T 13-10-2018 VEA_003017 59e3ac41c6ae7dac86f08d7e8510b759 248 SUPERFAMILY SSF51735 9 242 8.05E-65 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_003017 59e3ac41c6ae7dac86f08d7e8510b759 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 4.1E-6 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_003017 59e3ac41c6ae7dac86f08d7e8510b759 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 4.1E-6 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_003017 59e3ac41c6ae7dac86f08d7e8510b759 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 4.1E-6 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_003976 5c7fd56ee9bfdcdd4aaf7ba5832e78fd 758 Pfam PF02901 Pyruvate formate lyase-like 21 612 3.4E-207 T 13-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 VEA_003976 5c7fd56ee9bfdcdd4aaf7ba5832e78fd 758 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 8 758 0.0 T 13-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 VEA_003976 5c7fd56ee9bfdcdd4aaf7ba5832e78fd 758 SUPERFAMILY SSF51998 4 757 9.16E-291 T 13-10-2018 VEA_003976 5c7fd56ee9bfdcdd4aaf7ba5832e78fd 758 Gene3D G3DSA:3.20.70.20 1 758 0.0 T 13-10-2018 VEA_003976 5c7fd56ee9bfdcdd4aaf7ba5832e78fd 758 PIRSF PIRSF000379 5 758 0.0 T 13-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 VEA_003976 5c7fd56ee9bfdcdd4aaf7ba5832e78fd 758 ProSitePatterns PS00850 Glycine radical domain signature. 728 736 - T 13-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VEA_003976 5c7fd56ee9bfdcdd4aaf7ba5832e78fd 758 Pfam PF01228 Glycine radical 628 739 2.6E-43 T 13-10-2018 IPR001150 Glycine radical domain GO:0003824 VEA_000861 008ac480e2256f70ba4fffbf85bd9485 447 Pfam PF01523 Putative modulator of DNA gyrase 24 312 3.6E-44 T 13-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 VEA_000861 008ac480e2256f70ba4fffbf85bd9485 447 Gene3D G3DSA:3.30.2290.10 3 213 2.5E-34 T 13-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal VEA_000861 008ac480e2256f70ba4fffbf85bd9485 447 SUPERFAMILY SSF111283 8 445 3.4E-95 T 13-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 VEA_002045 23246598253fe433b78ec960fa5874b2 200 Pfam PF01323 DSBA-like thioredoxin domain 41 189 3.5E-27 T 13-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 VEA_002045 23246598253fe433b78ec960fa5874b2 200 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VEA_002045 23246598253fe433b78ec960fa5874b2 200 SUPERFAMILY SSF52833 20 197 6.26E-43 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VEA_002045 23246598253fe433b78ec960fa5874b2 200 Gene3D G3DSA:3.40.30.10 17 200 1.6E-53 T 13-10-2018 VEA_002045 23246598253fe433b78ec960fa5874b2 200 PIRSF PIRSF001488 1 200 1.6E-68 T 13-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL VEA_004512 61b955c4410d8811967cc54dfc40daaf 367 SUPERFAMILY SSF52540 61 194 3.91E-15 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_004512 61b955c4410d8811967cc54dfc40daaf 367 Pfam PF03969 AFG1-like ATPase 1 364 2.7E-154 T 13-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 VEA_004512 61b955c4410d8811967cc54dfc40daaf 367 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 367 53.023 T 13-10-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 VEA_004512 61b955c4410d8811967cc54dfc40daaf 367 Gene3D G3DSA:3.40.50.300 18 191 1.9E-22 T 13-10-2018 VEA_003129 518b9adbb156b01caaaf3dedd3025b0f 216 SMART SM00849 12 193 2.1E-38 T 13-10-2018 IPR001279 Metallo-beta-lactamase VEA_003129 518b9adbb156b01caaaf3dedd3025b0f 216 Gene3D G3DSA:3.60.15.10 1 211 9.0E-76 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEA_003129 518b9adbb156b01caaaf3dedd3025b0f 216 Pfam PF00753 Metallo-beta-lactamase superfamily 12 193 1.4E-29 T 13-10-2018 IPR001279 Metallo-beta-lactamase VEA_003129 518b9adbb156b01caaaf3dedd3025b0f 216 SUPERFAMILY SSF56281 1 210 1.02E-54 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEA_004090 b89b37786312932ea72e4dfab579219e 563 Gene3D G3DSA:3.30.300.310 458 559 1.4E-29 T 13-10-2018 VEA_004090 b89b37786312932ea72e4dfab579219e 563 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 544 5.0E-17 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VEA_004090 b89b37786312932ea72e4dfab579219e 563 SUPERFAMILY SSF56801 13 553 2.35E-151 T 13-10-2018 VEA_004090 b89b37786312932ea72e4dfab579219e 563 Gene3D G3DSA:3.40.50.12780 9 457 1.6E-119 T 13-10-2018 VEA_004090 b89b37786312932ea72e4dfab579219e 563 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 13-10-2018 IPR020845 AMP-binding, conserved site VEA_004090 b89b37786312932ea72e4dfab579219e 563 Pfam PF00501 AMP-binding enzyme 29 461 7.2E-109 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VEA_000592 f306f40d1cea00ba0837bdeefc41d41c 337 Pfam PF00962 Adenosine/AMP deaminase 8 323 1.3E-73 T 13-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 VEA_000592 f306f40d1cea00ba0837bdeefc41d41c 337 Hamap MF_01962 Adenine deaminase. 4 316 84.898 T 13-10-2018 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 VEA_000592 f306f40d1cea00ba0837bdeefc41d41c 337 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 8 324 4.2E-114 T 13-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 VEA_000592 f306f40d1cea00ba0837bdeefc41d41c 337 Gene3D G3DSA:3.20.20.140 1 335 6.7E-104 T 13-10-2018 VEA_000592 f306f40d1cea00ba0837bdeefc41d41c 337 SUPERFAMILY SSF51556 4 323 3.54E-89 T 13-10-2018 IPR032466 Metal-dependent hydrolase VEA_003761 1cd65b9536ed48cab2b2a7f54ec4add1 414 SUPERFAMILY SSF56796 1 380 1.44E-87 T 13-10-2018 VEA_003761 1cd65b9536ed48cab2b2a7f54ec4add1 414 Gene3D G3DSA:3.40.50.1970 1 180 2.2E-47 T 13-10-2018 VEA_003761 1cd65b9536ed48cab2b2a7f54ec4add1 414 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 372 1.3E-89 T 13-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VEA_003761 1cd65b9536ed48cab2b2a7f54ec4add1 414 Gene3D G3DSA:1.20.1090.10 187 382 7.5E-40 T 13-10-2018 VEA_004284 4faad07b6056ed33554062400a998ba1 137 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 1.8E-4 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEA_004284 4faad07b6056ed33554062400a998ba1 137 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEA_004284 4faad07b6056ed33554062400a998ba1 137 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 27 9.3E-8 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEA_001728 3469a8bf5a1216c2dcf4f84c3534da2b 130 Gene3D G3DSA:3.30.1370.30 2 72 6.5E-26 T 13-10-2018 VEA_001728 3469a8bf5a1216c2dcf4f84c3534da2b 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 13-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001728 3469a8bf5a1216c2dcf4f84c3534da2b 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 30.591 T 13-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001728 3469a8bf5a1216c2dcf4f84c3534da2b 130 SUPERFAMILY SSF56047 2 129 1.96E-43 T 13-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001728 3469a8bf5a1216c2dcf4f84c3534da2b 130 Pfam PF00410 Ribosomal protein S8 5 129 1.4E-46 T 13-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001728 3469a8bf5a1216c2dcf4f84c3534da2b 130 Gene3D G3DSA:3.30.1490.10 73 130 1.7E-24 T 13-10-2018 VEA_001494 2fcc9b1f1c45e6e58b4ef65dc98230da 268 Pfam PF01925 Sulfite exporter TauE/SafE 11 262 9.2E-44 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VEA_000924 cfebdb074b756479f27ea12bea8d234d 265 SMART SM00346 15 104 8.1E-29 T 13-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VEA_000924 cfebdb074b756479f27ea12bea8d234d 265 Pfam PF09339 IclR helix-turn-helix domain 17 67 7.9E-13 T 13-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VEA_000924 cfebdb074b756479f27ea12bea8d234d 265 Gene3D G3DSA:1.10.10.10 2 82 3.4E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000924 cfebdb074b756479f27ea12bea8d234d 265 Pfam PF01614 Bacterial transcriptional regulator 131 256 4.3E-38 T 13-10-2018 IPR014757 Transcription regulator IclR, C-terminal VEA_000924 cfebdb074b756479f27ea12bea8d234d 265 SUPERFAMILY SSF55781 79 261 6.15E-51 T 13-10-2018 VEA_000924 cfebdb074b756479f27ea12bea8d234d 265 Gene3D G3DSA:3.30.450.40 88 265 7.8E-60 T 13-10-2018 IPR029016 GAF-like domain superfamily VEA_000924 cfebdb074b756479f27ea12bea8d234d 265 SUPERFAMILY SSF46785 15 85 5.88E-14 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_002210 2507a765d3bb7c7670e2092d461f81a0 581 Pfam PF00999 Sodium/hydrogen exchanger family 15 386 6.7E-57 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VEA_002210 2507a765d3bb7c7670e2092d461f81a0 581 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 575 50.9 T 13-10-2018 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 VEA_002210 2507a765d3bb7c7670e2092d461f81a0 581 Gene3D G3DSA:3.30.70.1450 412 483 3.5E-11 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VEA_002210 2507a765d3bb7c7670e2092d461f81a0 581 Pfam PF03471 Transporter associated domain 497 570 5.8E-6 T 13-10-2018 IPR005170 Transporter-associated domain VEA_002210 2507a765d3bb7c7670e2092d461f81a0 581 SUPERFAMILY SSF56176 499 570 1.77E-6 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VEA_002210 2507a765d3bb7c7670e2092d461f81a0 581 SUPERFAMILY SSF116726 414 481 1.7E-9 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VEA_002210 2507a765d3bb7c7670e2092d461f81a0 581 SMART SM01091 493 572 1.7E-8 T 13-10-2018 IPR005170 Transporter-associated domain VEA_002210 2507a765d3bb7c7670e2092d461f81a0 581 Gene3D G3DSA:1.20.1530.20 7 392 7.4E-22 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily VEA_002210 2507a765d3bb7c7670e2092d461f81a0 581 Pfam PF02080 TrkA-C domain 417 484 1.5E-12 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VEA_004444 f1ae208860d109ca105f51bd0db25d53 215 Gene3D G3DSA:3.40.50.150 1 211 1.6E-52 T 13-10-2018 VEA_004444 f1ae208860d109ca105f51bd0db25d53 215 SUPERFAMILY SSF53335 11 167 1.31E-30 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_004444 f1ae208860d109ca105f51bd0db25d53 215 Pfam PF05175 Methyltransferase small domain 15 107 1.3E-17 T 13-10-2018 IPR007848 Methyltransferase small domain GO:0008168 VEA_004444 f1ae208860d109ca105f51bd0db25d53 215 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 87 99 4.9E-5 T 13-10-2018 VEA_004444 f1ae208860d109ca105f51bd0db25d53 215 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 117 141 4.9E-5 T 13-10-2018 VEA_004444 f1ae208860d109ca105f51bd0db25d53 215 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 22 36 4.9E-5 T 13-10-2018 VEA_004444 f1ae208860d109ca105f51bd0db25d53 215 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 90 96 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VEA_004444 f1ae208860d109ca105f51bd0db25d53 215 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 1 215 48.93 T 13-10-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 VEA_001404 43020f7530c97b9f7aae45df5cb65932 315 Gene3D G3DSA:2.40.30.170 231 308 4.4E-9 T 13-10-2018 VEA_001404 43020f7530c97b9f7aae45df5cb65932 315 Gene3D G3DSA:1.10.287.470 168 195 4.4E-9 T 13-10-2018 VEA_001404 43020f7530c97b9f7aae45df5cb65932 315 Gene3D G3DSA:2.40.50.100 196 230 4.4E-9 T 13-10-2018 VEA_001404 43020f7530c97b9f7aae45df5cb65932 315 Gene3D G3DSA:1.10.287.470 97 162 3.8E-11 T 13-10-2018 VEA_001404 43020f7530c97b9f7aae45df5cb65932 315 Pfam PF13437 HlyD family secretion protein 195 299 5.4E-9 T 13-10-2018 VEA_001404 43020f7530c97b9f7aae45df5cb65932 315 SUPERFAMILY SSF111369 102 158 2.22E-6 T 13-10-2018 VEA_001404 43020f7530c97b9f7aae45df5cb65932 315 Gene3D G3DSA:2.40.50.100 34 95 5.4E-6 T 13-10-2018 VEA_003843 f2ecc5a0ba1d402f0e24e9d06547cd2f 257 Pfam PF00977 Histidine biosynthesis protein 5 239 1.3E-79 T 13-10-2018 IPR006062 Histidine biosynthesis GO:0000105 VEA_003843 f2ecc5a0ba1d402f0e24e9d06547cd2f 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 1.9E-114 T 13-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 VEA_003843 f2ecc5a0ba1d402f0e24e9d06547cd2f 257 Gene3D G3DSA:3.20.20.70 1 257 5.3E-95 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_003843 f2ecc5a0ba1d402f0e24e9d06547cd2f 257 SUPERFAMILY SSF51366 1 256 1.41E-74 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VEA_003843 f2ecc5a0ba1d402f0e24e9d06547cd2f 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 44.848 T 13-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 VEA_001048 1f0f293470f02ca7cd8ffa4c98192dea 374 Gene3D G3DSA:2.40.370.10 252 374 3.2E-32 T 13-10-2018 IPR023374 AttH-like domain superfamily VEA_001048 1f0f293470f02ca7cd8ffa4c98192dea 374 Pfam PF07143 CrtC N-terminal lipocalin domain 72 247 1.1E-55 T 13-10-2018 IPR010791 AttH domain VEA_001048 1f0f293470f02ca7cd8ffa4c98192dea 374 SUPERFAMILY SSF159245 49 374 1.44E-106 T 13-10-2018 VEA_001048 1f0f293470f02ca7cd8ffa4c98192dea 374 Gene3D G3DSA:2.40.370.10 60 250 8.9E-67 T 13-10-2018 IPR023374 AttH-like domain superfamily VEA_001048 1f0f293470f02ca7cd8ffa4c98192dea 374 Pfam PF17186 Lipocalin-like domain 252 374 1.8E-41 T 13-10-2018 VEA_004134 f0256205f74637fccbf4f4d5d02a9603 462 SUPERFAMILY SSF103473 7 434 4.84E-42 T 13-10-2018 IPR036259 MFS transporter superfamily VEA_004134 f0256205f74637fccbf4f4d5d02a9603 462 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 6 216 7.1E-60 T 13-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 VEA_004134 f0256205f74637fccbf4f4d5d02a9603 462 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 225 440 3.2E-47 T 13-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 VEA_004134 f0256205f74637fccbf4f4d5d02a9603 462 Gene3D G3DSA:1.20.1250.20 1 224 9.2E-74 T 13-10-2018 VEA_004134 f0256205f74637fccbf4f4d5d02a9603 462 Gene3D G3DSA:1.20.1250.20 225 456 1.5E-60 T 13-10-2018 VEA_004134 f0256205f74637fccbf4f4d5d02a9603 462 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 153 165 - T 13-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 VEA_004134 f0256205f74637fccbf4f4d5d02a9603 462 Pfam PF00854 POT family 85 197 1.4E-28 T 13-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 VEA_004134 f0256205f74637fccbf4f4d5d02a9603 462 Pfam PF00854 POT family 230 405 1.3E-31 T 13-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 VEA_003553 2dc0470ae2bf90eda06db7731267ef0c 646 Gene3D G3DSA:3.60.21.70 315 565 1.7E-10 T 13-10-2018 IPR038607 PhoD-like superfamily VEA_003553 2dc0470ae2bf90eda06db7731267ef0c 646 SUPERFAMILY SSF56300 154 558 8.67E-13 T 13-10-2018 VEA_003099 08d51bedfe466a827a603bc7e2e5d781 588 SMART SM00278 534 553 0.14 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VEA_003099 08d51bedfe466a827a603bc7e2e5d781 588 SMART SM00278 566 585 300.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VEA_003099 08d51bedfe466a827a603bc7e2e5d781 588 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 1 567 2.1E-209 T 13-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 VEA_003099 08d51bedfe466a827a603bc7e2e5d781 588 SUPERFAMILY SSF46600 168 221 2.09E-13 T 13-10-2018 IPR036876 UVR domain superfamily VEA_003099 08d51bedfe466a827a603bc7e2e5d781 588 Hamap MF_00203 UvrABC system protein C [uvrC]. 1 585 26.784 T 13-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 VEA_003099 08d51bedfe466a827a603bc7e2e5d781 588 Pfam PF01541 GIY-YIG catalytic domain 2 71 2.0E-9 T 13-10-2018 IPR000305 GIY-YIG endonuclease VEA_003099 08d51bedfe466a827a603bc7e2e5d781 588 Pfam PF02151 UvrB/uvrC motif 183 216 1.2E-8 T 13-10-2018 IPR001943 UVR domain GO:0005515 VEA_003099 08d51bedfe466a827a603bc7e2e5d781 588 Gene3D G3DSA:3.40.1440.10 1 80 2.7E-25 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 VEA_003099 08d51bedfe466a827a603bc7e2e5d781 588 Pfam PF14520 Helix-hairpin-helix domain 536 587 2.2E-9 T 13-10-2018 VEA_003099 08d51bedfe466a827a603bc7e2e5d781 588 Gene3D G3DSA:3.30.420.340 358 530 6.8E-45 T 13-10-2018 IPR038476 UvrC homology region 2 superfamily VEA_003099 08d51bedfe466a827a603bc7e2e5d781 588 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 365 520 5.7E-43 T 13-10-2018 IPR001162 UvrC family homology region VEA_003099 08d51bedfe466a827a603bc7e2e5d781 588 SUPERFAMILY SSF82771 2 78 2.62E-19 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 VEA_003099 08d51bedfe466a827a603bc7e2e5d781 588 Gene3D G3DSA:1.10.150.20 533 588 7.3E-25 T 13-10-2018 VEA_003099 08d51bedfe466a827a603bc7e2e5d781 588 SMART SM00465 1 76 4.8E-15 T 13-10-2018 IPR000305 GIY-YIG endonuclease VEA_003099 08d51bedfe466a827a603bc7e2e5d781 588 SUPERFAMILY SSF47781 499 587 5.72E-19 T 13-10-2018 IPR010994 RuvA domain 2-like VEA_004230 73930bb57d9603fbd4b4424d49a8b369 416 PIRSF PIRSF000412 1 416 8.6E-170 T 13-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VEA_004230 73930bb57d9603fbd4b4424d49a8b369 416 Gene3D G3DSA:3.90.1150.10 10 396 6.5E-188 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEA_004230 73930bb57d9603fbd4b4424d49a8b369 416 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 416 52.61 T 13-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VEA_004230 73930bb57d9603fbd4b4424d49a8b369 416 Gene3D G3DSA:3.40.640.10 37 288 6.5E-188 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_004230 73930bb57d9603fbd4b4424d49a8b369 416 SUPERFAMILY SSF53383 6 415 1.51E-185 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_004230 73930bb57d9603fbd4b4424d49a8b369 416 Pfam PF00464 Serine hydroxymethyltransferase 8 385 9.8E-184 T 13-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VEA_004230 73930bb57d9603fbd4b4424d49a8b369 416 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 13-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VEA_003929 fe1e551abc2872404d5b7d94cb4e0585 323 Gene3D G3DSA:3.40.50.150 64 293 4.2E-21 T 13-10-2018 VEA_003929 fe1e551abc2872404d5b7d94cb4e0585 323 SUPERFAMILY SSF53335 91 323 4.07E-33 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_003929 fe1e551abc2872404d5b7d94cb4e0585 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 12 321 1.5E-148 T 13-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 VEA_003929 fe1e551abc2872404d5b7d94cb4e0585 323 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 13 322 54.763 T 13-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 VEA_003929 fe1e551abc2872404d5b7d94cb4e0585 323 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 2.4E-174 T 13-10-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like VEA_002064 8cd12974b62ce677a69cb68a926a7cca 161 Pfam PF00731 AIR carboxylase 2 150 8.3E-65 T 13-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 VEA_002064 8cd12974b62ce677a69cb68a926a7cca 161 SUPERFAMILY SSF52255 2 158 1.07E-66 T 13-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 VEA_002064 8cd12974b62ce677a69cb68a926a7cca 161 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 3 157 4.6E-67 T 13-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 VEA_002064 8cd12974b62ce677a69cb68a926a7cca 161 PIRSF PIRSF001338 1 160 1.4E-68 T 13-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 VEA_002064 8cd12974b62ce677a69cb68a926a7cca 161 SMART SM01001 1 152 8.6E-104 T 13-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 VEA_002064 8cd12974b62ce677a69cb68a926a7cca 161 Gene3D G3DSA:3.40.50.7700 1 161 2.9E-73 T 13-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 VEA_002064 8cd12974b62ce677a69cb68a926a7cca 161 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 3 156 32.52 T 13-10-2018 IPR033747 Class I PurE VEA_000290 b7ac87f59eac2e906c73754a53c22290 205 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 65 186 4.7E-14 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEA_000290 b7ac87f59eac2e906c73754a53c22290 205 SUPERFAMILY SSF56784 7 198 2.36E-36 T 13-10-2018 IPR036412 HAD-like superfamily VEA_000290 b7ac87f59eac2e906c73754a53c22290 205 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 150 170 2.3E-13 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEA_000290 b7ac87f59eac2e906c73754a53c22290 205 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 132 148 2.3E-13 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEA_000290 b7ac87f59eac2e906c73754a53c22290 205 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 2.3E-13 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEA_000290 b7ac87f59eac2e906c73754a53c22290 205 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 101 114 2.3E-13 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEA_000290 b7ac87f59eac2e906c73754a53c22290 205 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 177 190 2.3E-13 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEA_000290 b7ac87f59eac2e906c73754a53c22290 205 Gene3D G3DSA:3.40.50.1000 10 186 8.8E-40 T 13-10-2018 IPR023214 HAD superfamily VEA_000290 b7ac87f59eac2e906c73754a53c22290 205 Pfam PF13419 Haloacid dehalogenase-like hydrolase 70 186 9.1E-14 T 13-10-2018 VEA_000290 b7ac87f59eac2e906c73754a53c22290 205 Gene3D G3DSA:1.10.150.240 22 86 8.8E-40 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VEA_002667 e4cc34efeaceafa9dffa6ea8ec21f4a6 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.1E-7 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEA_002667 e4cc34efeaceafa9dffa6ea8ec21f4a6 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.1E-7 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEA_002667 e4cc34efeaceafa9dffa6ea8ec21f4a6 332 SMART SM00354 1 71 2.1E-32 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEA_002667 e4cc34efeaceafa9dffa6ea8ec21f4a6 332 SUPERFAMILY SSF53822 61 330 8.44E-83 T 13-10-2018 IPR028082 Periplasmic binding protein-like I VEA_002667 e4cc34efeaceafa9dffa6ea8ec21f4a6 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 9.1E-19 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEA_002667 e4cc34efeaceafa9dffa6ea8ec21f4a6 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 13-10-2018 VEA_002667 e4cc34efeaceafa9dffa6ea8ec21f4a6 332 Gene3D G3DSA:1.10.260.40 1 55 3.0E-22 T 13-10-2018 VEA_002667 e4cc34efeaceafa9dffa6ea8ec21f4a6 332 Gene3D G3DSA:3.40.50.2300 56 305 4.1E-73 T 13-10-2018 VEA_002667 e4cc34efeaceafa9dffa6ea8ec21f4a6 332 Pfam PF13377 Periplasmic binding protein-like domain 168 329 6.4E-38 T 13-10-2018 VEA_002667 e4cc34efeaceafa9dffa6ea8ec21f4a6 332 SUPERFAMILY SSF47413 1 60 6.28E-17 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEA_002667 e4cc34efeaceafa9dffa6ea8ec21f4a6 332 Gene3D G3DSA:3.40.50.2300 160 289 4.1E-73 T 13-10-2018 VEA_001391 f12545fa7984baf9ac5c91137ef86766 327 SMART SM00065 14 158 2.2E-8 T 13-10-2018 IPR003018 GAF domain GO:0005515 VEA_001391 f12545fa7984baf9ac5c91137ef86766 327 Gene3D G3DSA:3.30.70.270 158 326 7.7E-53 T 13-10-2018 VEA_001391 f12545fa7984baf9ac5c91137ef86766 327 SUPERFAMILY SSF55073 166 322 3.92E-45 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_001391 f12545fa7984baf9ac5c91137ef86766 327 Pfam PF01590 GAF domain 15 147 1.6E-10 T 13-10-2018 IPR003018 GAF domain GO:0005515 VEA_001391 f12545fa7984baf9ac5c91137ef86766 327 SUPERFAMILY SSF55781 6 149 1.33E-21 T 13-10-2018 VEA_001391 f12545fa7984baf9ac5c91137ef86766 327 SMART SM00267 143 322 4.2E-50 T 13-10-2018 IPR000160 GGDEF domain VEA_001391 f12545fa7984baf9ac5c91137ef86766 327 Pfam PF00990 Diguanylate cyclase, GGDEF domain 161 318 2.0E-42 T 13-10-2018 IPR000160 GGDEF domain VEA_001391 f12545fa7984baf9ac5c91137ef86766 327 Gene3D G3DSA:3.30.450.40 5 157 1.9E-20 T 13-10-2018 IPR029016 GAF-like domain superfamily VEA_001391 f12545fa7984baf9ac5c91137ef86766 327 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 157 322 1.5E-47 T 13-10-2018 IPR000160 GGDEF domain VEA_001795 caf40ba6c1f7db1f978a86f178c11b7c 421 SUPERFAMILY SSF53756 54 363 4.27E-15 T 13-10-2018 VEA_001795 caf40ba6c1f7db1f978a86f178c11b7c 421 Gene3D G3DSA:3.40.50.2000 215 400 6.0E-60 T 13-10-2018 VEA_001795 caf40ba6c1f7db1f978a86f178c11b7c 421 Pfam PF00534 Glycosyl transferases group 1 247 366 2.0E-7 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 VEA_001795 caf40ba6c1f7db1f978a86f178c11b7c 421 Gene3D G3DSA:3.40.50.11720 34 210 1.5E-46 T 13-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 VEA_001795 caf40ba6c1f7db1f978a86f178c11b7c 421 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 35 212 1.7E-61 T 13-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 VEA_002774 70c878058e20582d17f364d41bc2603b 416 TIGRFAM TIGR03503 TIGR03503: TIGR03503 family protein 24 400 3.5E-138 T 13-10-2018 IPR020010 Conserved hypothetical protein CHP03503 VEA_002956 64ab52c8a560a18feac5be93684da16e 159 Gene3D G3DSA:3.30.70.640 1 159 3.2E-70 T 13-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VEA_002956 64ab52c8a560a18feac5be93684da16e 159 SUPERFAMILY SSF55040 11 155 1.22E-61 T 13-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VEA_002956 64ab52c8a560a18feac5be93684da16e 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 6.0E-72 T 13-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VEA_002956 64ab52c8a560a18feac5be93684da16e 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 158 36.072 T 13-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VEA_002956 64ab52c8a560a18feac5be93684da16e 159 Pfam PF01967 MoaC family 15 150 7.5E-56 T 13-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VEA_002478 254edf6b5385bc52905b5ddfb6276bfd 230 Pfam PF04402 Protein of unknown function (DUF541) 29 227 4.5E-39 T 13-10-2018 IPR007497 Protein of unknown function DUF541 VEA_002478 254edf6b5385bc52905b5ddfb6276bfd 230 Gene3D G3DSA:3.30.110.170 31 227 4.2E-46 T 13-10-2018 VEA_002478 254edf6b5385bc52905b5ddfb6276bfd 230 Gene3D G3DSA:3.30.70.2970 41 148 4.2E-46 T 13-10-2018 VEA_001106 de01b851474f169da712c1d5afc036f9 225 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 4 223 37.597 T 13-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEA_001106 de01b851474f169da712c1d5afc036f9 225 Pfam PF00912 Transglycosylase 51 217 2.3E-50 T 13-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEA_001106 de01b851474f169da712c1d5afc036f9 225 SUPERFAMILY SSF53955 51 221 9.84E-57 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily VEA_001106 de01b851474f169da712c1d5afc036f9 225 Gene3D G3DSA:1.10.3810.10 47 224 8.1E-53 T 13-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEA_001106 de01b851474f169da712c1d5afc036f9 225 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 5 220 6.1E-67 T 13-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEA_003601 f1003fd2eecdbd3f9f568856c737512d 521 Gene3D G3DSA:3.40.720.10 24 427 5.6E-100 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VEA_003601 f1003fd2eecdbd3f9f568856c737512d 521 Pfam PF14707 C-terminal region of aryl-sulfatase 392 487 4.3E-7 T 13-10-2018 VEA_003601 f1003fd2eecdbd3f9f568856c737512d 521 Pfam PF00884 Sulfatase 27 353 2.7E-67 T 13-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VEA_003601 f1003fd2eecdbd3f9f568856c737512d 521 SUPERFAMILY SSF53649 23 469 5.96E-122 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VEA_003030 e3dd036565f3fca75a6f91a4a8d3b21f 350 Gene3D G3DSA:1.10.760.10 208 325 4.1E-37 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEA_003030 e3dd036565f3fca75a6f91a4a8d3b21f 350 SUPERFAMILY SSF46626 54 163 2.75E-26 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEA_003030 e3dd036565f3fca75a6f91a4a8d3b21f 350 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 221 301 1.0E-8 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_003030 e3dd036565f3fca75a6f91a4a8d3b21f 350 SUPERFAMILY SSF46626 209 313 6.5E-19 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEA_003030 e3dd036565f3fca75a6f91a4a8d3b21f 350 Gene3D G3DSA:1.10.760.10 36 162 9.0E-36 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEA_001222 9c7eb89484ef85426eb8ece14d663999 115 SUPERFAMILY SSF47413 8 87 1.04E-17 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEA_001222 9c7eb89484ef85426eb8ece14d663999 115 Gene3D G3DSA:1.10.260.40 3 86 2.7E-9 T 13-10-2018 VEA_002881 126e221097c8ff867f6ec73129ec1164 368 Gene3D G3DSA:3.40.50.2300 8 151 1.1E-35 T 13-10-2018 VEA_002881 126e221097c8ff867f6ec73129ec1164 368 SUPERFAMILY SSF52172 20 138 5.83E-35 T 13-10-2018 IPR011006 CheY-like superfamily VEA_002881 126e221097c8ff867f6ec73129ec1164 368 SMART SM00448 20 132 3.9E-30 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_002881 126e221097c8ff867f6ec73129ec1164 368 Pfam PF00072 Response regulator receiver domain 22 132 1.1E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_002881 126e221097c8ff867f6ec73129ec1164 368 Gene3D G3DSA:3.60.40.10 164 347 2.6E-6 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VEA_000824 4a5ea8d37409b619eab4608959640a9b 302 Pfam PF03466 LysR substrate binding domain 88 292 1.4E-28 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_000824 4a5ea8d37409b619eab4608959640a9b 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 2.6E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000824 4a5ea8d37409b619eab4608959640a9b 302 Gene3D G3DSA:1.10.10.10 5 69 4.1E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000824 4a5ea8d37409b619eab4608959640a9b 302 SUPERFAMILY SSF46785 2 110 1.33E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000824 4a5ea8d37409b619eab4608959640a9b 302 SUPERFAMILY SSF53850 89 293 9.64E-31 T 13-10-2018 VEA_000824 4a5ea8d37409b619eab4608959640a9b 302 Gene3D G3DSA:3.40.190.290 91 300 5.2E-18 T 13-10-2018 VEA_000824 4a5ea8d37409b619eab4608959640a9b 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.4E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000824 4a5ea8d37409b619eab4608959640a9b 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.4E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000824 4a5ea8d37409b619eab4608959640a9b 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.4E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000049 75c1e1909a4a5b23168f35a1a8fcbe28 484 Pfam PF05762 VWA domain containing CoxE-like protein 319 447 2.4E-11 T 13-10-2018 IPR008912 Uncharacterised protein family CoxE-like VEA_000049 75c1e1909a4a5b23168f35a1a8fcbe28 484 SUPERFAMILY SSF53300 318 475 1.46E-24 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VEA_000049 75c1e1909a4a5b23168f35a1a8fcbe28 484 Gene3D G3DSA:3.40.50.410 322 468 1.0E-7 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VEA_003081 a34306efa31a39b766f651cb29c5f846 513 Pfam PF00501 AMP-binding enzyme 8 416 2.8E-113 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VEA_003081 a34306efa31a39b766f651cb29c5f846 513 Pfam PF13193 AMP-binding enzyme C-terminal domain 425 500 1.0E-16 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VEA_003081 a34306efa31a39b766f651cb29c5f846 513 ProSitePatterns PS00455 Putative AMP-binding domain signature. 173 184 - T 13-10-2018 IPR020845 AMP-binding, conserved site VEA_003081 a34306efa31a39b766f651cb29c5f846 513 Gene3D G3DSA:3.30.300.310 412 512 1.0E-30 T 13-10-2018 VEA_003081 a34306efa31a39b766f651cb29c5f846 513 Gene3D G3DSA:3.40.50.12780 1 409 1.8E-127 T 13-10-2018 VEA_003081 a34306efa31a39b766f651cb29c5f846 513 SUPERFAMILY SSF56801 3 509 2.49E-160 T 13-10-2018 VEA_002461 68830c09414c193344da089d802714ea 174 Pfam PF02622 Uncharacterized ACR, COG1678 1 161 6.2E-50 T 13-10-2018 IPR003774 Protein of unknown function UPF0301 VEA_002461 68830c09414c193344da089d802714ea 174 Gene3D G3DSA:3.40.1740.10 1 174 2.2E-62 T 13-10-2018 VEA_002461 68830c09414c193344da089d802714ea 174 SUPERFAMILY SSF143456 1 174 5.76E-60 T 13-10-2018 VEA_002461 68830c09414c193344da089d802714ea 174 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 174 32.947 T 13-10-2018 IPR003774 Protein of unknown function UPF0301 VEA_001811 159d49c1e6f07bd147b107a69822d153 340 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 62 292 4.1E-53 T 13-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 VEA_001811 159d49c1e6f07bd147b107a69822d153 340 Gene3D G3DSA:3.40.50.2000 148 335 3.4E-37 T 13-10-2018 VEA_001811 159d49c1e6f07bd147b107a69822d153 340 Gene3D G3DSA:3.40.50.2000 1 144 1.2E-21 T 13-10-2018 VEA_001811 159d49c1e6f07bd147b107a69822d153 340 SUPERFAMILY SSF53756 1 334 1.13E-76 T 13-10-2018 VEA_000370 90ad73be9aebcc52e4d87e15d8c6eb64 298 PIRSF PIRSF000103 1 298 1.3E-81 T 13-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 VEA_000370 90ad73be9aebcc52e4d87e15d8c6eb64 298 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 292 6.3E-128 T 13-10-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 VEA_000370 90ad73be9aebcc52e4d87e15d8c6eb64 298 Gene3D G3DSA:1.10.1040.10 165 298 4.2E-44 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VEA_000370 90ad73be9aebcc52e4d87e15d8c6eb64 298 Gene3D G3DSA:3.40.50.720 1 164 4.6E-56 T 13-10-2018 VEA_000370 90ad73be9aebcc52e4d87e15d8c6eb64 298 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 13-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 VEA_000370 90ad73be9aebcc52e4d87e15d8c6eb64 298 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 162 7.8E-50 T 13-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 VEA_000370 90ad73be9aebcc52e4d87e15d8c6eb64 298 SUPERFAMILY SSF48179 163 295 4.53E-40 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VEA_000370 90ad73be9aebcc52e4d87e15d8c6eb64 298 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 291 7.0E-32 T 13-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 VEA_000370 90ad73be9aebcc52e4d87e15d8c6eb64 298 SUPERFAMILY SSF51735 3 163 1.36E-44 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_001334 2bb22644fe87cacf091b221cca18337c 240 Pfam PF12833 Helix-turn-helix domain 160 238 1.3E-21 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_001334 2bb22644fe87cacf091b221cca18337c 240 SMART SM00342 154 236 2.3E-23 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_001334 2bb22644fe87cacf091b221cca18337c 240 Gene3D G3DSA:1.10.10.60 134 239 3.7E-24 T 13-10-2018 VEA_001334 2bb22644fe87cacf091b221cca18337c 240 SUPERFAMILY SSF46689 191 238 9.32E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_001334 2bb22644fe87cacf091b221cca18337c 240 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 205 220 3.7E-6 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEA_001334 2bb22644fe87cacf091b221cca18337c 240 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 220 236 3.7E-6 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEA_001334 2bb22644fe87cacf091b221cca18337c 240 SUPERFAMILY SSF51182 9 163 1.22E-9 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily VEA_000005 3839f02d2320100731b2cf8cb554f2a3 204 SUPERFAMILY SSF52833 1 89 1.25E-19 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VEA_000005 3839f02d2320100731b2cf8cb554f2a3 204 Gene3D G3DSA:3.40.30.10 1 77 1.3E-20 T 13-10-2018 VEA_000005 3839f02d2320100731b2cf8cb554f2a3 204 Pfam PF13410 Glutathione S-transferase, C-terminal domain 129 194 1.0E-6 T 13-10-2018 VEA_000005 3839f02d2320100731b2cf8cb554f2a3 204 Gene3D G3DSA:1.20.1050.10 83 199 6.7E-32 T 13-10-2018 VEA_000005 3839f02d2320100731b2cf8cb554f2a3 204 SUPERFAMILY SSF47616 72 202 9.88E-24 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VEA_000005 3839f02d2320100731b2cf8cb554f2a3 204 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 79 1.1E-13 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VEA_003061 44457fe6eafd761c1099d9f98ed9e012 429 SMART SM00388 224 289 8.6E-15 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_003061 44457fe6eafd761c1099d9f98ed9e012 429 Gene3D G3DSA:1.10.287.130 174 290 4.8E-20 T 13-10-2018 VEA_003061 44457fe6eafd761c1099d9f98ed9e012 429 SUPERFAMILY SSF47384 207 289 1.71E-16 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEA_003061 44457fe6eafd761c1099d9f98ed9e012 429 Gene3D G3DSA:3.30.565.10 299 427 6.2E-14 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_003061 44457fe6eafd761c1099d9f98ed9e012 429 SMART SM00387 333 423 2.6E-10 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_003061 44457fe6eafd761c1099d9f98ed9e012 429 SUPERFAMILY SSF55874 280 419 4.79E-16 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_003061 44457fe6eafd761c1099d9f98ed9e012 429 Pfam PF00512 His Kinase A (phospho-acceptor) domain 226 287 7.4E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_003061 44457fe6eafd761c1099d9f98ed9e012 429 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 419 5.7E-8 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_001206 85488c8994450fc42af39f3d28f67cf9 457 SMART SM00388 257 320 3.1E-8 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_001206 85488c8994450fc42af39f3d28f67cf9 457 Gene3D G3DSA:3.30.565.10 318 452 2.1E-11 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_001206 85488c8994450fc42af39f3d28f67cf9 457 SUPERFAMILY SSF47384 240 318 2.16E-10 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEA_001206 85488c8994450fc42af39f3d28f67cf9 457 Gene3D G3DSA:1.10.287.130 194 316 1.9E-12 T 13-10-2018 VEA_001206 85488c8994450fc42af39f3d28f67cf9 457 SUPERFAMILY SSF55874 310 440 1.51E-14 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_001206 85488c8994450fc42af39f3d28f67cf9 457 Pfam PF00512 His Kinase A (phospho-acceptor) domain 261 319 2.2E-8 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_004459 53079d59402610ba0ebb78e7ddd80fa9 160 Pfam PF03737 Aldolase/RraA 5 152 6.2E-42 T 13-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VEA_004459 53079d59402610ba0ebb78e7ddd80fa9 160 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 2.1E-68 T 13-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 VEA_004459 53079d59402610ba0ebb78e7ddd80fa9 160 SUPERFAMILY SSF89562 1 158 7.59E-47 T 13-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily VEA_004459 53079d59402610ba0ebb78e7ddd80fa9 160 Gene3D G3DSA:3.50.30.40 1 160 3.0E-64 T 13-10-2018 VEA_003710 aa141e118c782bdfba053e9951056eed 262 Gene3D G3DSA:1.10.357.10 22 212 2.3E-16 T 13-10-2018 VEA_003710 aa141e118c782bdfba053e9951056eed 262 Pfam PF00440 Bacterial regulatory proteins, tetR family 35 81 1.6E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEA_003710 aa141e118c782bdfba053e9951056eed 262 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 48 3.8E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEA_003710 aa141e118c782bdfba053e9951056eed 262 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 56 79 3.8E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEA_003710 aa141e118c782bdfba053e9951056eed 262 SUPERFAMILY SSF46689 28 86 4.05E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_002279 29acd69719a5da366fe6e71805de4e20 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 13-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site VEA_002279 29acd69719a5da366fe6e71805de4e20 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 5.7E-11 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VEA_002279 29acd69719a5da366fe6e71805de4e20 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 5.7E-11 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VEA_002279 29acd69719a5da366fe6e71805de4e20 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 8.8E-16 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VEA_002279 29acd69719a5da366fe6e71805de4e20 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 13-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 VEA_002279 29acd69719a5da366fe6e71805de4e20 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 13-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site VEA_002279 29acd69719a5da366fe6e71805de4e20 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 7.0E-23 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain VEA_002279 29acd69719a5da366fe6e71805de4e20 210 Gene3D G3DSA:2.60.120.10 10 138 3.0E-43 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VEA_002279 29acd69719a5da366fe6e71805de4e20 210 SUPERFAMILY SSF51206 8 137 7.33E-35 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like VEA_002279 29acd69719a5da366fe6e71805de4e20 210 SMART SM00419 160 208 4.2E-17 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VEA_002279 29acd69719a5da366fe6e71805de4e20 210 Gene3D G3DSA:1.10.10.10 139 207 1.0E-35 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_002279 29acd69719a5da366fe6e71805de4e20 210 SUPERFAMILY SSF46785 139 207 3.88E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_002279 29acd69719a5da366fe6e71805de4e20 210 SMART SM00100 2 122 3.7E-27 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain VEA_002172 e625e3fe35c1ea1f7be59d5de2242a42 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 122 3.1E-29 T 13-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002172 e625e3fe35c1ea1f7be59d5de2242a42 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 57 95 4.0E-14 T 13-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002172 e625e3fe35c1ea1f7be59d5de2242a42 122 SUPERFAMILY SSF54736 52 122 7.32E-24 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VEA_002172 e625e3fe35c1ea1f7be59d5de2242a42 122 SUPERFAMILY SSF48300 4 58 2.75E-15 T 13-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002172 e625e3fe35c1ea1f7be59d5de2242a42 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 122 24.394 T 13-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002172 e625e3fe35c1ea1f7be59d5de2242a42 122 Gene3D G3DSA:3.30.1390.10 52 122 4.7E-30 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VEA_002172 e625e3fe35c1ea1f7be59d5de2242a42 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 50 6.1E-16 T 13-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002172 e625e3fe35c1ea1f7be59d5de2242a42 122 Gene3D G3DSA:1.20.5.710 2 51 8.5E-23 T 13-10-2018 VEA_002172 e625e3fe35c1ea1f7be59d5de2242a42 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 1.9E-46 T 13-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_003334 79472344a43901ec69fc4ea0a79a9217 286 Pfam PF12833 Helix-turn-helix domain 199 276 3.4E-25 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_003334 79472344a43901ec69fc4ea0a79a9217 286 SUPERFAMILY SSF46689 229 277 6.27E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_003334 79472344a43901ec69fc4ea0a79a9217 286 Gene3D G3DSA:1.10.10.60 173 283 5.6E-30 T 13-10-2018 VEA_003334 79472344a43901ec69fc4ea0a79a9217 286 SMART SM00342 193 276 7.7E-31 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_003334 79472344a43901ec69fc4ea0a79a9217 286 SUPERFAMILY SSF46689 178 226 3.58E-6 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_003334 79472344a43901ec69fc4ea0a79a9217 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 260 276 7.9E-8 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEA_003334 79472344a43901ec69fc4ea0a79a9217 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 260 7.9E-8 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEA_003334 79472344a43901ec69fc4ea0a79a9217 286 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 230 272 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VEA_000001 0ae323e0536d79d4bf99a89617c4e904 419 SUPERFAMILY SSF55124 85 224 1.52E-27 T 13-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEA_000001 0ae323e0536d79d4bf99a89617c4e904 419 Pfam PF04324 BFD-like [2Fe-2S] binding domain 6 54 1.2E-14 T 13-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain VEA_000001 0ae323e0536d79d4bf99a89617c4e904 419 Gene3D G3DSA:3.30.413.10 214 374 2.9E-34 T 13-10-2018 VEA_000001 0ae323e0536d79d4bf99a89617c4e904 419 SUPERFAMILY SSF56014 216 390 5.63E-49 T 13-10-2018 VEA_000001 0ae323e0536d79d4bf99a89617c4e904 419 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 262 278 - T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEA_000001 0ae323e0536d79d4bf99a89617c4e904 419 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 143 204 6.1E-12 T 13-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEA_000001 0ae323e0536d79d4bf99a89617c4e904 419 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 215 340 5.2E-19 T 13-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEA_000001 0ae323e0536d79d4bf99a89617c4e904 419 Gene3D G3DSA:1.10.10.1100 5 60 3.3E-12 T 13-10-2018 VEA_000001 0ae323e0536d79d4bf99a89617c4e904 419 PRINTS PR00397 Sirohaem Fe-binding site signature 219 237 2.5E-7 T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEA_000001 0ae323e0536d79d4bf99a89617c4e904 419 PRINTS PR00397 Sirohaem Fe-binding site signature 262 280 2.5E-7 T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VEA_000868 30f0746a6f90057891fab8c1b51ddd51 263 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 10 253 7.4E-78 T 13-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VEA_000868 30f0746a6f90057891fab8c1b51ddd51 263 SUPERFAMILY SSF53613 6 260 1.6E-60 T 13-10-2018 IPR029056 Ribokinase-like VEA_000868 30f0746a6f90057891fab8c1b51ddd51 263 Gene3D G3DSA:3.40.1190.20 1 262 2.1E-90 T 13-10-2018 IPR029056 Ribokinase-like VEA_000868 30f0746a6f90057891fab8c1b51ddd51 263 Pfam PF02110 Hydroxyethylthiazole kinase family 10 252 6.8E-73 T 13-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VEA_000868 30f0746a6f90057891fab8c1b51ddd51 263 PIRSF PIRSF000513 4 263 3.2E-99 T 13-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VEA_000868 30f0746a6f90057891fab8c1b51ddd51 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 88 105 2.0E-34 T 13-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VEA_000868 30f0746a6f90057891fab8c1b51ddd51 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 119 133 2.0E-34 T 13-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VEA_000868 30f0746a6f90057891fab8c1b51ddd51 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 18 25 2.0E-34 T 13-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VEA_000868 30f0746a6f90057891fab8c1b51ddd51 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 62 70 2.0E-34 T 13-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VEA_000868 30f0746a6f90057891fab8c1b51ddd51 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 31 52 2.0E-34 T 13-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VEA_000868 30f0746a6f90057891fab8c1b51ddd51 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 163 180 2.0E-34 T 13-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VEA_000868 30f0746a6f90057891fab8c1b51ddd51 263 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 12 255 30.047 T 13-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VEA_000631 286da914fe65401442d8aa363a804be9 477 Gene3D G3DSA:1.10.10.10 19 88 2.2E-14 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000631 286da914fe65401442d8aa363a804be9 477 SUPERFAMILY SSF46785 20 88 1.7E-14 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000631 286da914fe65401442d8aa363a804be9 477 SMART SM00345 27 86 3.2E-11 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_000631 286da914fe65401442d8aa363a804be9 477 SUPERFAMILY SSF53383 93 467 1.05E-61 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_000631 286da914fe65401442d8aa363a804be9 477 Pfam PF00155 Aminotransferase class I and II 149 461 3.1E-13 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VEA_000631 286da914fe65401442d8aa363a804be9 477 Gene3D G3DSA:3.40.640.10 100 458 2.6E-52 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_000631 286da914fe65401442d8aa363a804be9 477 Pfam PF00392 Bacterial regulatory proteins, gntR family 26 86 9.5E-12 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_000008 64689fbd53df3506e1533faea19f1165 165 Pfam PF13581 Histidine kinase-like ATPase domain 15 146 8.6E-18 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_000008 64689fbd53df3506e1533faea19f1165 165 SUPERFAMILY SSF55874 33 146 3.8E-12 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_000008 64689fbd53df3506e1533faea19f1165 165 Gene3D G3DSA:3.30.565.10 4 157 2.3E-16 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_001181 bd0c184e43e82308592b00803e748a60 123 SUPERFAMILY SSF101801 41 116 4.84E-19 T 13-10-2018 IPR036429 SpoA-like superfamily VEA_001181 bd0c184e43e82308592b00803e748a60 123 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 46 113 1.5E-19 T 13-10-2018 IPR001543 Surface presentation of antigen (SpoA) VEA_001181 bd0c184e43e82308592b00803e748a60 123 PRINTS PR00956 Flagellar motor switch protein FliN signature 90 105 6.1E-17 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VEA_001181 bd0c184e43e82308592b00803e748a60 123 PRINTS PR00956 Flagellar motor switch protein FliN signature 44 60 6.1E-17 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VEA_001181 bd0c184e43e82308592b00803e748a60 123 PRINTS PR00956 Flagellar motor switch protein FliN signature 61 77 6.1E-17 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VEA_001181 bd0c184e43e82308592b00803e748a60 123 PRINTS PR00956 Flagellar motor switch protein FliN signature 77 90 6.1E-17 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VEA_001181 bd0c184e43e82308592b00803e748a60 123 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 42 116 9.3E-29 T 13-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 VEA_001181 bd0c184e43e82308592b00803e748a60 123 Gene3D G3DSA:2.30.330.10 31 119 2.8E-23 T 13-10-2018 IPR036429 SpoA-like superfamily VEA_002402 1ec7847d046e78a22ee229fc93fe952c 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 6.3E-34 T 13-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 VEA_002402 1ec7847d046e78a22ee229fc93fe952c 95 SUPERFAMILY SSF69754 1 95 4.97E-35 T 13-10-2018 IPR036567 Ribosome hibernation promotion factor-like VEA_002402 1ec7847d046e78a22ee229fc93fe952c 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 93 1.5E-28 T 13-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 VEA_002402 1ec7847d046e78a22ee229fc93fe952c 95 Gene3D G3DSA:3.30.160.100 1 95 1.1E-38 T 13-10-2018 IPR036567 Ribosome hibernation promotion factor-like VEA_004168 80e68b11842c5dc18288dd8d11b271f7 262 Pfam PF00460 Flagella basal body rod protein 5 35 3.6E-12 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VEA_004168 80e68b11842c5dc18288dd8d11b271f7 262 SUPERFAMILY SSF117143 93 223 6.67E-35 T 13-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like VEA_004168 80e68b11842c5dc18288dd8d11b271f7 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site VEA_004168 80e68b11842c5dc18288dd8d11b271f7 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 147 244 1.6E-30 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VEA_004168 80e68b11842c5dc18288dd8d11b271f7 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 137 5.4E-41 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VEA_004168 80e68b11842c5dc18288dd8d11b271f7 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 261 8.0E-118 T 13-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 VEA_004168 80e68b11842c5dc18288dd8d11b271f7 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 184 260 9.1E-24 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VEA_002423 3f090f8575fc7df2ea975e29a27e2c25 266 Gene3D G3DSA:2.60.120.260 29 157 1.8E-8 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily VEA_002423 3f090f8575fc7df2ea975e29a27e2c25 266 SUPERFAMILY SSF49785 2 155 7.31E-18 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily VEA_003564 e0c5093aba46f3b377ebf8d4a665873f 579 Pfam PF00005 ABC transporter 353 500 1.9E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_003564 e0c5093aba46f3b377ebf8d4a665873f 579 Pfam PF00664 ABC transporter transmembrane region 21 291 2.9E-44 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VEA_003564 e0c5093aba46f3b377ebf8d4a665873f 579 SMART SM00382 361 547 9.2E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_003564 e0c5093aba46f3b377ebf8d4a665873f 579 Gene3D G3DSA:1.20.1560.10 5 318 1.2E-75 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEA_003564 e0c5093aba46f3b377ebf8d4a665873f 579 SUPERFAMILY SSF52540 336 571 7.65E-77 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003564 e0c5093aba46f3b377ebf8d4a665873f 579 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_003564 e0c5093aba46f3b377ebf8d4a665873f 579 Gene3D G3DSA:3.40.50.300 336 579 4.7E-74 T 13-10-2018 VEA_003564 e0c5093aba46f3b377ebf8d4a665873f 579 SUPERFAMILY SSF90123 7 320 9.68E-74 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEA_002391 c51d4ab19813fe942ba64546145cccc3 458 Pfam PF02562 PhoH-like protein 248 452 1.8E-53 T 13-10-2018 IPR003714 PhoH-like protein GO:0005524 VEA_002391 c51d4ab19813fe942ba64546145cccc3 458 SMART SM00670 7 141 2.3E-10 T 13-10-2018 IPR002716 PIN domain VEA_002391 c51d4ab19813fe942ba64546145cccc3 458 Gene3D G3DSA:3.40.50.300 245 456 4.7E-65 T 13-10-2018 VEA_002391 c51d4ab19813fe942ba64546145cccc3 458 SUPERFAMILY SSF52540 159 437 4.17E-29 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002391 c51d4ab19813fe942ba64546145cccc3 458 SUPERFAMILY SSF88723 7 160 1.67E-14 T 13-10-2018 IPR029060 PIN-like domain superfamily VEA_002391 c51d4ab19813fe942ba64546145cccc3 458 Gene3D G3DSA:3.40.50.1010 3 155 1.1E-27 T 13-10-2018 VEA_002391 c51d4ab19813fe942ba64546145cccc3 458 Pfam PF13638 PIN domain 9 150 5.9E-35 T 13-10-2018 IPR002716 PIN domain VEA_000870 4f7bd7a0e461491fd2affca203e2acd1 232 Pfam PF01569 PAP2 superfamily 74 218 1.1E-18 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VEA_000870 4f7bd7a0e461491fd2affca203e2acd1 232 SMART SM00014 68 216 1.8E-12 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VEA_000870 4f7bd7a0e461491fd2affca203e2acd1 232 Gene3D G3DSA:1.20.144.10 1 226 1.3E-46 T 13-10-2018 VEA_000870 4f7bd7a0e461491fd2affca203e2acd1 232 SUPERFAMILY SSF48317 24 215 5.1E-21 T 13-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily VEA_001192 1d5c03c2373fb4613a6395d156fdfdfa 296 Gene3D G3DSA:3.40.190.10 102 291 3.6E-34 T 13-10-2018 VEA_001192 1d5c03c2373fb4613a6395d156fdfdfa 296 SUPERFAMILY SSF46785 3 84 2.23E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_001192 1d5c03c2373fb4613a6395d156fdfdfa 296 Pfam PF03466 LysR substrate binding domain 93 295 6.0E-22 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_001192 1d5c03c2373fb4613a6395d156fdfdfa 296 Gene3D G3DSA:3.40.190.10 163 264 3.6E-34 T 13-10-2018 VEA_001192 1d5c03c2373fb4613a6395d156fdfdfa 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 4.0E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_001192 1d5c03c2373fb4613a6395d156fdfdfa 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 4.0E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_001192 1d5c03c2373fb4613a6395d156fdfdfa 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 4.0E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_001192 1d5c03c2373fb4613a6395d156fdfdfa 296 Gene3D G3DSA:1.10.10.10 5 89 6.0E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001192 1d5c03c2373fb4613a6395d156fdfdfa 296 SUPERFAMILY SSF53850 94 295 1.63E-24 T 13-10-2018 VEA_001192 1d5c03c2373fb4613a6395d156fdfdfa 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 1.0E-18 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_003670 f94722b87544a849fabd2a5efcabdafc 324 Gene3D G3DSA:3.30.1780.10 5 315 1.7E-80 T 13-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 VEA_003670 f94722b87544a849fabd2a5efcabdafc 324 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 3 314 1.5E-53 T 13-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 VEA_003670 f94722b87544a849fabd2a5efcabdafc 324 SUPERFAMILY SSF51735 1 315 5.64E-84 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_003670 f94722b87544a849fabd2a5efcabdafc 324 PIRSF PIRSF001439 1 319 3.0E-67 T 13-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 VEA_003670 f94722b87544a849fabd2a5efcabdafc 324 Gene3D G3DSA:3.40.50.720 119 302 1.7E-80 T 13-10-2018 VEA_003638 2bc415aca97e18f76f092c7043fb8466 158 SUPERFAMILY SSF53850 40 155 1.25E-5 T 13-10-2018 VEA_003954 6d11174317f83b2fd9648729dbc76d2f 233 SUPERFAMILY SSF55729 80 231 9.8E-24 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_003954 6d11174317f83b2fd9648729dbc76d2f 233 PIRSF PIRSF037208 1 233 3.5E-87 T 13-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 VEA_003954 6d11174317f83b2fd9648729dbc76d2f 233 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 105 226 5.4E-32 T 13-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 VEA_003954 6d11174317f83b2fd9648729dbc76d2f 233 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 16 86 1.5E-18 T 13-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 VEA_003954 6d11174317f83b2fd9648729dbc76d2f 233 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 6 232 36.71 T 13-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 VEA_002358 26d8ddc663d20a7442b571c49e42c20d 373 Gene3D G3DSA:3.40.640.10 22 269 5.9E-146 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_002358 26d8ddc663d20a7442b571c49e42c20d 373 SUPERFAMILY SSF53383 9 371 1.08E-105 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_002358 26d8ddc663d20a7442b571c49e42c20d 373 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 209 - T 13-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VEA_002358 26d8ddc663d20a7442b571c49e42c20d 373 Pfam PF00266 Aminotransferase class-V 13 340 2.4E-39 T 13-10-2018 IPR000192 Aminotransferase class V domain VEA_002358 26d8ddc663d20a7442b571c49e42c20d 373 PIRSF PIRSF000524 5 373 5.9E-112 T 13-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 VEA_002358 26d8ddc663d20a7442b571c49e42c20d 373 Gene3D G3DSA:3.90.1150.10 9 371 5.9E-146 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEA_004398 70361488596dbaf7854f3560c9158c06 392 Gene3D G3DSA:1.20.59.10 3 112 6.1E-31 T 13-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VEA_004398 70361488596dbaf7854f3560c9158c06 392 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 9 91 7.1E-27 T 13-10-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 VEA_004398 70361488596dbaf7854f3560c9158c06 392 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 265 287 - T 13-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 VEA_004398 70361488596dbaf7854f3560c9158c06 392 PIRSF PIRSF001500 1 384 1.7E-142 T 13-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 VEA_004398 70361488596dbaf7854f3560c9158c06 392 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 329 336 - T 13-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 VEA_004398 70361488596dbaf7854f3560c9158c06 392 SUPERFAMILY SSF55021 284 381 4.43E-26 T 13-10-2018 VEA_004398 70361488596dbaf7854f3560c9158c06 392 Pfam PF00800 Prephenate dehydratase 110 291 1.4E-60 T 13-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 VEA_004398 70361488596dbaf7854f3560c9158c06 392 Gene3D G3DSA:3.40.190.10 193 278 2.8E-55 T 13-10-2018 VEA_004398 70361488596dbaf7854f3560c9158c06 392 Gene3D G3DSA:3.40.190.10 113 287 2.8E-55 T 13-10-2018 VEA_004398 70361488596dbaf7854f3560c9158c06 392 Gene3D G3DSA:3.30.70.260 295 383 8.0E-26 T 13-10-2018 VEA_004398 70361488596dbaf7854f3560c9158c06 392 SUPERFAMILY SSF53850 109 295 6.19E-56 T 13-10-2018 VEA_004398 70361488596dbaf7854f3560c9158c06 392 SUPERFAMILY SSF48600 7 95 8.06E-19 T 13-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VEA_004398 70361488596dbaf7854f3560c9158c06 392 Pfam PF01817 Chorismate mutase type II 12 91 2.8E-16 T 13-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VEA_004398 70361488596dbaf7854f3560c9158c06 392 SMART SM00830 12 93 1.6E-21 T 13-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VEA_001681 140b80e70a1696b30db981a8a94f9a8d 145 Gene3D G3DSA:3.40.50.620 1 142 1.5E-36 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_001681 140b80e70a1696b30db981a8a94f9a8d 145 PIRSF PIRSF006276 1 145 7.2E-19 T 13-10-2018 IPR006015 Universal stress protein A VEA_001681 140b80e70a1696b30db981a8a94f9a8d 145 SUPERFAMILY SSF52402 2 143 4.6E-35 T 13-10-2018 VEA_001681 140b80e70a1696b30db981a8a94f9a8d 145 Pfam PF00582 Universal stress protein family 1 142 2.9E-32 T 13-10-2018 IPR006016 UspA VEA_001681 140b80e70a1696b30db981a8a94f9a8d 145 PRINTS PR01438 Universal stress protein signature 102 114 2.3E-11 T 13-10-2018 IPR006015 Universal stress protein A VEA_001681 140b80e70a1696b30db981a8a94f9a8d 145 PRINTS PR01438 Universal stress protein signature 2 20 2.3E-11 T 13-10-2018 IPR006015 Universal stress protein A VEA_001681 140b80e70a1696b30db981a8a94f9a8d 145 PRINTS PR01438 Universal stress protein signature 120 142 2.3E-11 T 13-10-2018 IPR006015 Universal stress protein A VEA_001879 66dfdcdbeca7de831c8b7ab8d79119cc 194 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 3 194 44.868 T 13-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 VEA_001879 66dfdcdbeca7de831c8b7ab8d79119cc 194 Gene3D G3DSA:2.60.300.12 2 100 3.0E-14 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VEA_001879 66dfdcdbeca7de831c8b7ab8d79119cc 194 Pfam PF01106 NifU-like domain 113 179 4.6E-19 T 13-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 VEA_001879 66dfdcdbeca7de831c8b7ab8d79119cc 194 SUPERFAMILY SSF89360 3 99 2.16E-22 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VEA_001879 66dfdcdbeca7de831c8b7ab8d79119cc 194 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 121 180 8.0E-27 T 13-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 VEA_001879 66dfdcdbeca7de831c8b7ab8d79119cc 194 Pfam PF01521 Iron-sulphur cluster biosynthesis 3 101 8.1E-13 T 13-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 VEA_001879 66dfdcdbeca7de831c8b7ab8d79119cc 194 SUPERFAMILY SSF117916 97 187 5.23E-23 T 13-10-2018 IPR034904 Fe-S cluster assembly domain superfamily VEA_001879 66dfdcdbeca7de831c8b7ab8d79119cc 194 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 4 194 3.6E-96 T 13-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 VEA_001879 66dfdcdbeca7de831c8b7ab8d79119cc 194 Gene3D G3DSA:3.30.300.130 103 191 2.2E-19 T 13-10-2018 IPR034904 Fe-S cluster assembly domain superfamily VEA_002599 8658bb1b49e2bccd7a6ab923339b637d 336 SUPERFAMILY SSF56935 22 336 1.28E-51 T 13-10-2018 VEA_002599 8658bb1b49e2bccd7a6ab923339b637d 336 Pfam PF13609 Gram-negative porin 10 301 7.2E-23 T 13-10-2018 VEA_002599 8658bb1b49e2bccd7a6ab923339b637d 336 Gene3D G3DSA:2.40.160.10 22 336 6.7E-64 T 13-10-2018 IPR023614 Porin domain superfamily VEA_002749 bb4b0e3518f3fa5c906dad05ed80aaad 185 Gene3D G3DSA:1.10.132.20 11 182 2.4E-68 T 13-10-2018 VEA_002749 bb4b0e3518f3fa5c906dad05ed80aaad 185 Gene3D G3DSA:3.30.1360.40 31 105 2.4E-68 T 13-10-2018 VEA_002749 bb4b0e3518f3fa5c906dad05ed80aaad 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.852 T 13-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 VEA_002749 bb4b0e3518f3fa5c906dad05ed80aaad 185 SUPERFAMILY SSF55194 2 185 4.19E-72 T 13-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 VEA_002749 bb4b0e3518f3fa5c906dad05ed80aaad 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 1.3E-77 T 13-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 VEA_002749 bb4b0e3518f3fa5c906dad05ed80aaad 185 Pfam PF01765 Ribosome recycling factor 20 183 3.9E-63 T 13-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 VEA_000030 e6816f1e29eace6f849030e2af7ada47 96 Pfam PF05488 PAAR motif 18 86 4.0E-24 T 13-10-2018 IPR008727 PAAR motif VEA_000030 e6816f1e29eace6f849030e2af7ada47 96 Gene3D G3DSA:2.60.200.60 1 52 3.6E-11 T 13-10-2018 VEA_000030 e6816f1e29eace6f849030e2af7ada47 96 Gene3D G3DSA:2.60.200.60 53 95 5.1E-13 T 13-10-2018 VEA_002204 60faf30617bc77eeba9ca40fce64e758 461 Hamap MF_00743 Fumarate hydratase class II [fumC]. 5 457 74.241 T 13-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VEA_002204 60faf30617bc77eeba9ca40fce64e758 461 PRINTS PR00149 Fumarate lyase superfamily signature 175 193 6.1E-32 T 13-10-2018 IPR000362 Fumarate lyase family VEA_002204 60faf30617bc77eeba9ca40fce64e758 461 PRINTS PR00149 Fumarate lyase superfamily signature 129 147 6.1E-32 T 13-10-2018 IPR000362 Fumarate lyase family VEA_002204 60faf30617bc77eeba9ca40fce64e758 461 PRINTS PR00149 Fumarate lyase superfamily signature 266 293 6.1E-32 T 13-10-2018 IPR000362 Fumarate lyase family VEA_002204 60faf30617bc77eeba9ca40fce64e758 461 PRINTS PR00149 Fumarate lyase superfamily signature 312 328 6.1E-32 T 13-10-2018 IPR000362 Fumarate lyase family VEA_002204 60faf30617bc77eeba9ca40fce64e758 461 Pfam PF00206 Lyase 13 337 2.6E-92 T 13-10-2018 IPR022761 Fumarate lyase, N-terminal VEA_002204 60faf30617bc77eeba9ca40fce64e758 461 PRINTS PR00145 Argininosuccinate lyase family signature 170 190 4.0E-6 T 13-10-2018 VEA_002204 60faf30617bc77eeba9ca40fce64e758 461 PRINTS PR00145 Argininosuccinate lyase family signature 128 150 4.0E-6 T 13-10-2018 VEA_002204 60faf30617bc77eeba9ca40fce64e758 461 PRINTS PR00145 Argininosuccinate lyase family signature 312 328 4.0E-6 T 13-10-2018 VEA_002204 60faf30617bc77eeba9ca40fce64e758 461 Gene3D G3DSA:1.10.275.10 6 133 1.8E-48 T 13-10-2018 IPR024083 Fumarase/histidase, N-terminal VEA_002204 60faf30617bc77eeba9ca40fce64e758 461 SUPERFAMILY SSF48557 5 455 2.83E-135 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 VEA_002204 60faf30617bc77eeba9ca40fce64e758 461 Gene3D G3DSA:1.20.200.10 134 400 7.7E-96 T 13-10-2018 VEA_002204 60faf30617bc77eeba9ca40fce64e758 461 Gene3D G3DSA:1.10.40.30 403 454 7.5E-18 T 13-10-2018 VEA_002204 60faf30617bc77eeba9ca40fce64e758 461 Pfam PF10415 Fumarase C C-terminus 403 455 1.8E-18 T 13-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VEA_002204 60faf30617bc77eeba9ca40fce64e758 461 ProSitePatterns PS00163 Fumarate lyases signature. 312 321 - T 13-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 VEA_001697 edb5408dc7d334c5db0b74eced308ba6 183 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 182 3.5E-87 T 13-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ VEA_001697 edb5408dc7d334c5db0b74eced308ba6 183 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 24 182 1.2E-75 T 13-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ VEA_000355 14664b3a9b5af57ee387fe57c1d24b60 325 PIRSF PIRSF000294 2 321 3.8E-76 T 13-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 VEA_000355 14664b3a9b5af57ee387fe57c1d24b60 325 Pfam PF00034 Cytochrome c 203 311 5.0E-6 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_000355 14664b3a9b5af57ee387fe57c1d24b60 325 Gene3D G3DSA:1.10.760.10 51 180 3.9E-86 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEA_000355 14664b3a9b5af57ee387fe57c1d24b60 325 Gene3D G3DSA:1.10.760.10 181 313 3.9E-86 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEA_000355 14664b3a9b5af57ee387fe57c1d24b60 325 SUPERFAMILY SSF46626 181 317 1.35E-30 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEA_000355 14664b3a9b5af57ee387fe57c1d24b60 325 Pfam PF03150 Di-haem cytochrome c peroxidase 50 192 5.3E-34 T 13-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 VEA_000355 14664b3a9b5af57ee387fe57c1d24b60 325 SUPERFAMILY SSF46626 36 182 2.83E-36 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEA_003907 bcf10525c3309d5763a902cff7b45e0d 189 Pfam PF06693 Protein of unknown function (DUF1190) 41 184 7.7E-27 T 13-10-2018 IPR009576 Biofilm formation YgiB VEA_002015 7563458ab3c61051b4f3ce574939d81c 85 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 23 75 5.0E-24 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor VEA_002015 7563458ab3c61051b4f3ce574939d81c 85 Pfam PF01809 Haemolytic domain 10 75 1.6E-28 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor VEA_002015 7563458ab3c61051b4f3ce574939d81c 85 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 14 82 5.6E-30 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor VEA_002015 7563458ab3c61051b4f3ce574939d81c 85 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 8 76 24.437 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor VEA_002015 7563458ab3c61051b4f3ce574939d81c 85 SMART SM01234 8 75 1.9E-41 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor VEA_000332 036f1226e8562a38c9b06afd465fa39c 302 SUPERFAMILY SSF53807 20 282 1.54E-58 T 13-10-2018 VEA_000332 036f1226e8562a38c9b06afd465fa39c 302 Pfam PF01497 Periplasmic binding protein 48 275 1.3E-19 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain VEA_000332 036f1226e8562a38c9b06afd465fa39c 302 Gene3D G3DSA:3.40.50.1980 171 274 1.5E-88 T 13-10-2018 VEA_000332 036f1226e8562a38c9b06afd465fa39c 302 Gene3D G3DSA:3.40.50.1980 25 280 1.5E-88 T 13-10-2018 VEA_001099 5a858d76cee335ff377f5d1a3bb00219 204 SUPERFAMILY SSF52833 43 196 2.12E-36 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VEA_001099 5a858d76cee335ff377f5d1a3bb00219 204 Pfam PF02630 SCO1/SenC 21 177 5.8E-30 T 13-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001099 5a858d76cee335ff377f5d1a3bb00219 204 Gene3D G3DSA:3.40.30.10 18 198 4.3E-36 T 13-10-2018 VEA_004368 8d14e4eedd9c66dfc76192f8b095bfcc 350 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 345 3.0E-159 T 13-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 VEA_004368 8d14e4eedd9c66dfc76192f8b095bfcc 350 SUPERFAMILY SSF111337 1 345 3.79E-138 T 13-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 VEA_004368 8d14e4eedd9c66dfc76192f8b095bfcc 350 Pfam PF02547 Queuosine biosynthesis protein 3 345 1.9E-133 T 13-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 VEA_004368 8d14e4eedd9c66dfc76192f8b095bfcc 350 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 346 47.152 T 13-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 VEA_004368 8d14e4eedd9c66dfc76192f8b095bfcc 350 Gene3D G3DSA:3.40.1780.10 14 345 2.2E-117 T 13-10-2018 VEA_004368 8d14e4eedd9c66dfc76192f8b095bfcc 350 Gene3D G3DSA:2.40.10.240 64 163 2.2E-117 T 13-10-2018 VEA_001628 f5f443fb9517ee501f287374daec60c5 239 Pfam PF04402 Protein of unknown function (DUF541) 41 217 6.5E-14 T 13-10-2018 IPR007497 Protein of unknown function DUF541 VEA_001628 f5f443fb9517ee501f287374daec60c5 239 PIRSF PIRSF029033 1 239 3.6E-108 T 13-10-2018 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein VEA_000806 9c493f5eb6495665d4fe769a678b1239 414 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 411 35.41 T 13-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 VEA_000806 9c493f5eb6495665d4fe769a678b1239 414 PIRSF PIRSF016055 1 412 4.8E-187 T 13-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 VEA_000806 9c493f5eb6495665d4fe769a678b1239 414 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 407 1.6E-177 T 13-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 VEA_000806 9c493f5eb6495665d4fe769a678b1239 414 Pfam PF03116 NQR2, RnfD, RnfE family 44 404 8.7E-105 T 13-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 VEA_002167 218016ac09a9497853d832570e32ea6d 126 Hamap MF_00422 Protein translocase subunit SecE [secE]. 67 122 13.517 T 13-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VEA_002167 218016ac09a9497853d832570e32ea6d 126 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 70 122 9.6E-18 T 13-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 VEA_002167 218016ac09a9497853d832570e32ea6d 126 Gene3D G3DSA:1.20.5.1030 67 123 1.2E-17 T 13-10-2018 IPR038379 SecE superfamily VEA_002167 218016ac09a9497853d832570e32ea6d 126 PRINTS PR01650 Bacterial translocase SecE signature 66 86 2.9E-41 T 13-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 VEA_002167 218016ac09a9497853d832570e32ea6d 126 PRINTS PR01650 Bacterial translocase SecE signature 90 110 2.9E-41 T 13-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 VEA_002167 218016ac09a9497853d832570e32ea6d 126 PRINTS PR01650 Bacterial translocase SecE signature 45 66 2.9E-41 T 13-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 VEA_002167 218016ac09a9497853d832570e32ea6d 126 PRINTS PR01650 Bacterial translocase SecE signature 110 126 2.9E-41 T 13-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 VEA_002167 218016ac09a9497853d832570e32ea6d 126 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 71 121 5.6E-21 T 13-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VEA_002167 218016ac09a9497853d832570e32ea6d 126 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 72 100 - T 13-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VEA_002501 6a82740ef9070979397ea8ca41dee161 126 Gene3D G3DSA:3.90.470.20 1 126 4.6E-41 T 13-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VEA_002501 6a82740ef9070979397ea8ca41dee161 126 SUPERFAMILY SSF56214 3 125 7.46E-31 T 13-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VEA_002501 6a82740ef9070979397ea8ca41dee161 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 126 7.6E-43 T 13-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 VEA_002501 6a82740ef9070979397ea8ca41dee161 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 125 4.4E-31 T 13-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 VEA_002501 6a82740ef9070979397ea8ca41dee161 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 122 8.3E-23 T 13-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VEA_002501 6a82740ef9070979397ea8ca41dee161 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 26.143 T 13-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 VEA_002501 6a82740ef9070979397ea8ca41dee161 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 87 7.0E-36 T 13-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 VEA_002531 0b80b031424961a8466ad6a26d43cfa1 188 SUPERFAMILY SSF53955 6 153 3.68E-22 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily VEA_002531 0b80b031424961a8466ad6a26d43cfa1 188 Gene3D G3DSA:1.10.530.10 23 183 6.3E-14 T 13-10-2018 VEA_000071 d67e333b6dfaddfd037f50ae8f804a43 283 Gene3D G3DSA:1.20.1080.10 2 251 1.0E-61 T 13-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VEA_000071 d67e333b6dfaddfd037f50ae8f804a43 283 Pfam PF01226 Formate/nitrite transporter 9 258 2.1E-57 T 13-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 VEA_000249 4b99acb81e222e0d644e9b0177aeeee0 168 Gene3D G3DSA:3.90.45.10 1 168 2.6E-61 T 13-10-2018 IPR036821 Peptide deformylase superfamily VEA_000249 4b99acb81e222e0d644e9b0177aeeee0 168 PIRSF PIRSF004749 1 168 2.4E-49 T 13-10-2018 IPR023635 Peptide deformylase VEA_000249 4b99acb81e222e0d644e9b0177aeeee0 168 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 9.3E-49 T 13-10-2018 IPR023635 Peptide deformylase VEA_000249 4b99acb81e222e0d644e9b0177aeeee0 168 SUPERFAMILY SSF56420 2 164 8.24E-55 T 13-10-2018 IPR036821 Peptide deformylase superfamily VEA_000249 4b99acb81e222e0d644e9b0177aeeee0 168 PRINTS PR01576 Peptide deformylase signature 33 62 1.2E-29 T 13-10-2018 IPR023635 Peptide deformylase VEA_000249 4b99acb81e222e0d644e9b0177aeeee0 168 PRINTS PR01576 Peptide deformylase signature 89 100 1.2E-29 T 13-10-2018 IPR023635 Peptide deformylase VEA_000249 4b99acb81e222e0d644e9b0177aeeee0 168 PRINTS PR01576 Peptide deformylase signature 120 149 1.2E-29 T 13-10-2018 IPR023635 Peptide deformylase VEA_000249 4b99acb81e222e0d644e9b0177aeeee0 168 PRINTS PR01576 Peptide deformylase signature 101 119 1.2E-29 T 13-10-2018 IPR023635 Peptide deformylase VEA_000249 4b99acb81e222e0d644e9b0177aeeee0 168 Hamap MF_00163 Peptide deformylase [def]. 2 162 29.622 T 13-10-2018 IPR023635 Peptide deformylase VEA_000249 4b99acb81e222e0d644e9b0177aeeee0 168 Pfam PF01327 Polypeptide deformylase 4 152 5.6E-46 T 13-10-2018 IPR023635 Peptide deformylase VEA_004181 4c0d1056a4ce6b21a94c607c97810528 377 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 299 374 7.4E-28 T 13-10-2018 IPR032388 Flagellar assembly protein T, C-terminal VEA_004181 4c0d1056a4ce6b21a94c607c97810528 377 Gene3D G3DSA:3.40.50.10610 114 290 1.2E-58 T 13-10-2018 VEA_004181 4c0d1056a4ce6b21a94c607c97810528 377 Gene3D G3DSA:3.30.1660.40 24 113 6.7E-37 T 13-10-2018 IPR038180 FlgT, N-terminal domain superfamily VEA_004181 4c0d1056a4ce6b21a94c607c97810528 377 Pfam PF16539 Flagellar assembly protein T, middle domain 115 256 1.5E-42 T 13-10-2018 IPR032386 Flagellar assembly protein T, middle domain VEA_004181 4c0d1056a4ce6b21a94c607c97810528 377 Gene3D G3DSA:2.40.10.410 291 377 6.0E-38 T 13-10-2018 IPR038165 FlgT, C-terminal domain superfamily VEA_004181 4c0d1056a4ce6b21a94c607c97810528 377 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 24 110 3.4E-26 T 13-10-2018 IPR032370 Flagellar assembly protein T, N-terminal VEA_000544 f819486d5dbb05d01c2a145b6505e48b 828 SMART SM00448 705 822 5.7E-34 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_000544 f819486d5dbb05d01c2a145b6505e48b 828 SMART SM00387 440 557 4.2E-36 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_000544 f819486d5dbb05d01c2a145b6505e48b 828 Gene3D G3DSA:3.30.565.10 392 558 6.2E-50 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_000544 f819486d5dbb05d01c2a145b6505e48b 828 Pfam PF00072 Response regulator receiver domain 707 821 1.1E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_000544 f819486d5dbb05d01c2a145b6505e48b 828 Gene3D G3DSA:3.40.50.12330 697 762 2.9E-20 T 13-10-2018 VEA_000544 f819486d5dbb05d01c2a145b6505e48b 828 SUPERFAMILY SSF47384 313 394 5.3E-21 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEA_000544 f819486d5dbb05d01c2a145b6505e48b 828 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 441 554 2.3E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_000544 f819486d5dbb05d01c2a145b6505e48b 828 Gene3D G3DSA:3.40.50.2300 763 826 8.2E-18 T 13-10-2018 VEA_000544 f819486d5dbb05d01c2a145b6505e48b 828 Pfam PF00512 His Kinase A (phospho-acceptor) domain 329 393 1.0E-19 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_000544 f819486d5dbb05d01c2a145b6505e48b 828 SUPERFAMILY SSF52172 703 824 4.55E-35 T 13-10-2018 IPR011006 CheY-like superfamily VEA_000544 f819486d5dbb05d01c2a145b6505e48b 828 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 554 6.6E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_000544 f819486d5dbb05d01c2a145b6505e48b 828 PRINTS PR00344 Bacterial sensor protein C-terminal signature 482 496 6.6E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_000544 f819486d5dbb05d01c2a145b6505e48b 828 PRINTS PR00344 Bacterial sensor protein C-terminal signature 517 535 6.6E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_000544 f819486d5dbb05d01c2a145b6505e48b 828 PRINTS PR00344 Bacterial sensor protein C-terminal signature 500 510 6.6E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_000544 f819486d5dbb05d01c2a145b6505e48b 828 Gene3D G3DSA:1.10.287.130 294 391 5.1E-28 T 13-10-2018 VEA_000544 f819486d5dbb05d01c2a145b6505e48b 828 SUPERFAMILY SSF55874 382 553 5.37E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_000544 f819486d5dbb05d01c2a145b6505e48b 828 SMART SM00388 328 393 1.5E-24 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_000272 a781f21562b12242bfd9db41d00eb491 301 SUPERFAMILY SSF103481 193 290 6.54E-13 T 13-10-2018 VEA_000272 a781f21562b12242bfd9db41d00eb491 301 SUPERFAMILY SSF103481 48 145 1.44E-16 T 13-10-2018 VEA_000272 a781f21562b12242bfd9db41d00eb491 301 Pfam PF00892 EamA-like transporter family 157 287 9.1E-10 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEA_000272 a781f21562b12242bfd9db41d00eb491 301 Pfam PF00892 EamA-like transporter family 11 142 3.2E-15 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEA_000407 b9559eb0d1502d0a156fc29021571ffe 250 SUPERFAMILY SSF52402 2 242 5.51E-81 T 13-10-2018 VEA_000407 b9559eb0d1502d0a156fc29021571ffe 250 SMART SM00893 23 211 2.7E-66 T 13-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 VEA_000407 b9559eb0d1502d0a156fc29021571ffe 250 Gene3D G3DSA:3.40.50.620 1 247 9.9E-85 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_000407 b9559eb0d1502d0a156fc29021571ffe 250 Pfam PF01012 Electron transfer flavoprotein domain 26 205 4.3E-47 T 13-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 VEA_000407 b9559eb0d1502d0a156fc29021571ffe 250 PIRSF PIRSF000090 1 249 4.1E-81 T 13-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 VEA_003839 0eed6118a0b2812158aa8bd73a741978 223 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 1 210 2.3E-93 T 13-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 VEA_003839 0eed6118a0b2812158aa8bd73a741978 223 Gene3D G3DSA:3.60.21.10 3 212 3.7E-14 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like VEA_003839 0eed6118a0b2812158aa8bd73a741978 223 SUPERFAMILY SSF56300 4 201 1.82E-25 T 13-10-2018 VEA_003839 0eed6118a0b2812158aa8bd73a741978 223 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 219 107.914 T 13-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 VEA_003839 0eed6118a0b2812158aa8bd73a741978 223 Pfam PF00149 Calcineurin-like phosphoesterase 10 177 3.2E-7 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VEA_001564 b62460b7eb9e9ee8bbb98f0aef2ebc3a 329 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 17 323 1.5E-73 T 13-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 VEA_001564 b62460b7eb9e9ee8bbb98f0aef2ebc3a 329 Gene3D G3DSA:3.20.20.140 1 326 9.3E-93 T 13-10-2018 VEA_001564 b62460b7eb9e9ee8bbb98f0aef2ebc3a 329 SUPERFAMILY SSF51556 4 325 5.7E-84 T 13-10-2018 IPR032466 Metal-dependent hydrolase VEA_000636 52de3bd4bfaefd75fdc7f86304fc58dc 506 Gene3D G3DSA:3.40.309.10 278 467 1.2E-172 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VEA_000636 52de3bd4bfaefd75fdc7f86304fc58dc 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 271 278 - T 13-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VEA_000636 52de3bd4bfaefd75fdc7f86304fc58dc 506 SUPERFAMILY SSF53720 22 499 8.77E-164 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VEA_000636 52de3bd4bfaefd75fdc7f86304fc58dc 506 Gene3D G3DSA:3.40.605.10 38 489 1.2E-172 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VEA_000636 52de3bd4bfaefd75fdc7f86304fc58dc 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 299 310 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VEA_000636 52de3bd4bfaefd75fdc7f86304fc58dc 506 Pfam PF00171 Aldehyde dehydrogenase family 38 493 1.0E-159 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VEA_004044 b52bc18512aab65c8a8a1e2ea15e4227 208 Gene3D G3DSA:3.90.226.10 4 207 1.1E-84 T 13-10-2018 VEA_004044 b52bc18512aab65c8a8a1e2ea15e4227 208 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 13-10-2018 IPR018215 ClpP, Ser active site VEA_004044 b52bc18512aab65c8a8a1e2ea15e4227 208 SUPERFAMILY SSF52096 23 206 3.63E-75 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEA_004044 b52bc18512aab65c8a8a1e2ea15e4227 208 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 15 205 5.2E-107 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VEA_004044 b52bc18512aab65c8a8a1e2ea15e4227 208 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 13-10-2018 IPR033135 ClpP, histidine active site VEA_004044 b52bc18512aab65c8a8a1e2ea15e4227 208 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 44.387 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VEA_004044 b52bc18512aab65c8a8a1e2ea15e4227 208 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 6.8E-54 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VEA_004044 b52bc18512aab65c8a8a1e2ea15e4227 208 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 6.8E-54 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VEA_004044 b52bc18512aab65c8a8a1e2ea15e4227 208 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 6.8E-54 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VEA_004044 b52bc18512aab65c8a8a1e2ea15e4227 208 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 6.8E-54 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VEA_004044 b52bc18512aab65c8a8a1e2ea15e4227 208 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 6.8E-54 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VEA_004044 b52bc18512aab65c8a8a1e2ea15e4227 208 Pfam PF00574 Clp protease 25 205 2.4E-89 T 13-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA VEA_002150 c8b769b272dc75464fc6cc9bd0e7a678 264 SUPERFAMILY SSF53335 13 246 1.83E-35 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_002150 c8b769b272dc75464fc6cc9bd0e7a678 264 PIRSF PIRSF028177 1 264 1.7E-73 T 13-10-2018 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 VEA_002150 c8b769b272dc75464fc6cc9bd0e7a678 264 Gene3D G3DSA:3.40.50.150 2 247 1.0E-20 T 13-10-2018 VEA_002150 c8b769b272dc75464fc6cc9bd0e7a678 264 Pfam PF04072 Leucine carboxyl methyltransferase 64 204 8.2E-8 T 13-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 VEA_001711 5b4d2533ae592457da67dbc958bf7ced 459 SMART SM00490 257 338 6.3E-27 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_001711 5b4d2533ae592457da67dbc958bf7ced 459 SUPERFAMILY SSF52540 73 357 1.2E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001711 5b4d2533ae592457da67dbc958bf7ced 459 Gene3D G3DSA:3.30.70.330 389 458 5.2E-18 T 13-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VEA_001711 5b4d2533ae592457da67dbc958bf7ced 459 Pfam PF03880 DbpA RNA binding domain 386 456 6.7E-22 T 13-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain VEA_001711 5b4d2533ae592457da67dbc958bf7ced 459 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VEA_001711 5b4d2533ae592457da67dbc958bf7ced 459 Gene3D G3DSA:3.40.50.300 2 210 2.1E-74 T 13-10-2018 VEA_001711 5b4d2533ae592457da67dbc958bf7ced 459 Gene3D G3DSA:3.40.50.300 211 388 6.1E-45 T 13-10-2018 VEA_001711 5b4d2533ae592457da67dbc958bf7ced 459 Pfam PF00270 DEAD/DEAH box helicase 28 194 5.1E-47 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VEA_001711 5b4d2533ae592457da67dbc958bf7ced 459 SMART SM00487 23 225 8.1E-58 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEA_001711 5b4d2533ae592457da67dbc958bf7ced 459 Pfam PF00271 Helicase conserved C-terminal domain 231 338 1.2E-27 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_003323 efab3c9d8adcd08bc0b9ed71804340a1 500 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 10 191 1.9E-64 T 13-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VEA_003323 efab3c9d8adcd08bc0b9ed71804340a1 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 171 199 1.0E-49 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VEA_003323 efab3c9d8adcd08bc0b9ed71804340a1 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 332 358 1.0E-49 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VEA_003323 efab3c9d8adcd08bc0b9ed71804340a1 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 147 160 1.0E-49 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VEA_003323 efab3c9d8adcd08bc0b9ed71804340a1 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 223 240 1.0E-49 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VEA_003323 efab3c9d8adcd08bc0b9ed71804340a1 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 241 257 1.0E-49 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VEA_003323 efab3c9d8adcd08bc0b9ed71804340a1 500 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 6 487 85.623 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VEA_003323 efab3c9d8adcd08bc0b9ed71804340a1 500 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 181 187 - T 13-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VEA_003323 efab3c9d8adcd08bc0b9ed71804340a1 500 SUPERFAMILY SSF51735 4 194 5.91E-62 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_003323 efab3c9d8adcd08bc0b9ed71804340a1 500 Gene3D G3DSA:3.40.50.720 4 179 1.1E-59 T 13-10-2018 VEA_003323 efab3c9d8adcd08bc0b9ed71804340a1 500 SUPERFAMILY SSF55347 181 489 2.78E-113 T 13-10-2018 VEA_003323 efab3c9d8adcd08bc0b9ed71804340a1 500 Gene3D G3DSA:3.30.360.10 180 488 6.3E-125 T 13-10-2018 VEA_003323 efab3c9d8adcd08bc0b9ed71804340a1 500 PIRSF PIRSF000110 3 489 1.3E-177 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VEA_003323 efab3c9d8adcd08bc0b9ed71804340a1 500 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 193 486 3.9E-115 T 13-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VEA_003323 efab3c9d8adcd08bc0b9ed71804340a1 500 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 6 486 2.5E-203 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VEA_000331 977ed5eceb8fbb1f99e7d0bb75b39ecf 289 Gene3D G3DSA:1.10.3470.10 1 289 4.5E-61 T 13-10-2018 IPR037294 ABC transporter, BtuC-like VEA_000331 977ed5eceb8fbb1f99e7d0bb75b39ecf 289 Pfam PF01032 FecCD transport family 7 284 9.3E-64 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VEA_000331 977ed5eceb8fbb1f99e7d0bb75b39ecf 289 SUPERFAMILY SSF81345 10 284 1.7E-61 T 13-10-2018 IPR037294 ABC transporter, BtuC-like VEA_002784 100adf3b005db112dd7bc51a7115133e 402 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 18 249 5.5E-68 T 13-10-2018 IPR018642 Protein of unknown function DUF2066 VEA_000603 f9faf97ec0aaaf47f6fd952f73faaa29 239 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 183 0.0027 T 13-10-2018 VEA_000603 f9faf97ec0aaaf47f6fd952f73faaa29 239 SUPERFAMILY SSF51735 4 238 6.07E-81 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_000603 f9faf97ec0aaaf47f6fd952f73faaa29 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 8.2E-46 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000603 f9faf97ec0aaaf47f6fd952f73faaa29 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 8.2E-46 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000603 f9faf97ec0aaaf47f6fd952f73faaa29 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 8.2E-46 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000603 f9faf97ec0aaaf47f6fd952f73faaa29 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 8.2E-46 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000603 f9faf97ec0aaaf47f6fd952f73faaa29 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 8.2E-46 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000603 f9faf97ec0aaaf47f6fd952f73faaa29 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 8.2E-46 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000603 f9faf97ec0aaaf47f6fd952f73faaa29 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 3.7E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000603 f9faf97ec0aaaf47f6fd952f73faaa29 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 3.7E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000603 f9faf97ec0aaaf47f6fd952f73faaa29 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 3.7E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000603 f9faf97ec0aaaf47f6fd952f73faaa29 239 Gene3D G3DSA:3.40.50.720 1 239 1.2E-81 T 13-10-2018 VEA_000603 f9faf97ec0aaaf47f6fd952f73faaa29 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VEA_000603 f9faf97ec0aaaf47f6fd952f73faaa29 239 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 237 4.9E-62 T 13-10-2018 VEA_002068 e6dbf67b7aebc4884ce46a3e77d5f13c 87 Pfam PF07369 Protein of unknown function (DUF1488) 5 85 1.6E-26 T 13-10-2018 IPR009962 Protein of unknown function DUF1488 VEA_002068 e6dbf67b7aebc4884ce46a3e77d5f13c 87 Gene3D G3DSA:3.30.160.140 1 87 5.6E-33 T 13-10-2018 IPR036692 Shew3726-like superfamily VEA_002068 e6dbf67b7aebc4884ce46a3e77d5f13c 87 SUPERFAMILY SSF160272 1 86 9.02E-30 T 13-10-2018 IPR036692 Shew3726-like superfamily VEA_002544 7bf061bc1c12853f3489c5ce2f89fdc8 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 167 195 7.0E-19 T 13-10-2018 IPR003004 GspF/PilC family VEA_002544 7bf061bc1c12853f3489c5ce2f89fdc8 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 387 406 7.0E-19 T 13-10-2018 IPR003004 GspF/PilC family VEA_002544 7bf061bc1c12853f3489c5ce2f89fdc8 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 371 385 7.0E-19 T 13-10-2018 IPR003004 GspF/PilC family VEA_002544 7bf061bc1c12853f3489c5ce2f89fdc8 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 68 80 7.0E-19 T 13-10-2018 IPR003004 GspF/PilC family VEA_002544 7bf061bc1c12853f3489c5ce2f89fdc8 407 Pfam PF00482 Type II secretion system (T2SS), protein F 276 398 4.8E-27 T 13-10-2018 IPR018076 Type II secretion system F domain VEA_002544 7bf061bc1c12853f3489c5ce2f89fdc8 407 Pfam PF00482 Type II secretion system (T2SS), protein F 72 195 1.3E-33 T 13-10-2018 IPR018076 Type II secretion system F domain VEA_002544 7bf061bc1c12853f3489c5ce2f89fdc8 407 Gene3D G3DSA:1.20.81.30 259 370 9.8E-27 T 13-10-2018 VEA_002544 7bf061bc1c12853f3489c5ce2f89fdc8 407 Gene3D G3DSA:1.20.81.30 58 174 1.6E-29 T 13-10-2018 VEA_002544 7bf061bc1c12853f3489c5ce2f89fdc8 407 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 167 195 - T 13-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 VEA_000247 5e554e202a7334a216bde197cc4fe35d 167 Pfam PF11158 Protein of unknown function (DUF2938) 11 157 6.1E-56 T 13-10-2018 IPR021329 Protein of unknown function DUF2938 VEA_002821 93796fb5159ccde1cbfded58f57fa0a6 167 Pfam PF03748 Flagellar basal body-associated protein FliL 66 167 4.4E-20 T 13-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 VEA_000722 6d2f0bf1a247942767e5511dfe9e3b92 532 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 522 2.9E-99 T 13-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 VEA_000722 6d2f0bf1a247942767e5511dfe9e3b92 532 PRINTS PR00298 60kDa chaperonin signature 27 53 7.7E-71 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VEA_000722 6d2f0bf1a247942767e5511dfe9e3b92 532 PRINTS PR00298 60kDa chaperonin signature 83 110 7.7E-71 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VEA_000722 6d2f0bf1a247942767e5511dfe9e3b92 532 PRINTS PR00298 60kDa chaperonin signature 350 375 7.7E-71 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VEA_000722 6d2f0bf1a247942767e5511dfe9e3b92 532 PRINTS PR00298 60kDa chaperonin signature 398 419 7.7E-71 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VEA_000722 6d2f0bf1a247942767e5511dfe9e3b92 532 PRINTS PR00298 60kDa chaperonin signature 268 291 7.7E-71 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VEA_000722 6d2f0bf1a247942767e5511dfe9e3b92 532 SUPERFAMILY SSF54849 137 203 1.01E-24 T 13-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily VEA_000722 6d2f0bf1a247942767e5511dfe9e3b92 532 Gene3D G3DSA:3.30.260.10 136 410 2.4E-236 T 13-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily VEA_000722 6d2f0bf1a247942767e5511dfe9e3b92 532 SUPERFAMILY SSF52029 184 376 3.14E-79 T 13-10-2018 IPR027409 GroEL-like apical domain superfamily VEA_000722 6d2f0bf1a247942767e5511dfe9e3b92 532 Gene3D G3DSA:3.50.7.10 192 372 2.4E-236 T 13-10-2018 IPR027409 GroEL-like apical domain superfamily VEA_000722 6d2f0bf1a247942767e5511dfe9e3b92 532 Hamap MF_00600 60 kDa chaperonin [groL]. 2 530 39.783 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VEA_000722 6d2f0bf1a247942767e5511dfe9e3b92 532 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 13-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VEA_000722 6d2f0bf1a247942767e5511dfe9e3b92 532 Gene3D G3DSA:1.10.560.10 8 521 2.4E-236 T 13-10-2018 IPR027413 GroEL-like equatorial domain superfamily VEA_000722 6d2f0bf1a247942767e5511dfe9e3b92 532 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 1.4E-249 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VEA_000722 6d2f0bf1a247942767e5511dfe9e3b92 532 SUPERFAMILY SSF48592 7 521 6.26E-77 T 13-10-2018 IPR027413 GroEL-like equatorial domain superfamily VEA_001279 855d70c9623e069799317b0f6c660f84 446 Gene3D G3DSA:1.10.287.470 228 301 2.5E-15 T 13-10-2018 VEA_001279 855d70c9623e069799317b0f6c660f84 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 39 62 2.7E-40 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VEA_001279 855d70c9623e069799317b0f6c660f84 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 347 371 2.7E-40 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VEA_001279 855d70c9623e069799317b0f6c660f84 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 371 394 2.7E-40 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VEA_001279 855d70c9623e069799317b0f6c660f84 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 425 445 2.7E-40 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VEA_001279 855d70c9623e069799317b0f6c660f84 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 314 335 2.7E-40 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VEA_001279 855d70c9623e069799317b0f6c660f84 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 81 101 2.7E-40 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VEA_001279 855d70c9623e069799317b0f6c660f84 446 Gene3D G3DSA:2.40.50.100 78 103 5.9E-7 T 13-10-2018 VEA_001279 855d70c9623e069799317b0f6c660f84 446 Gene3D G3DSA:2.40.30.170 339 422 2.5E-15 T 13-10-2018 VEA_001279 855d70c9623e069799317b0f6c660f84 446 Gene3D G3DSA:2.40.50.100 302 338 2.5E-15 T 13-10-2018 VEA_001279 855d70c9623e069799317b0f6c660f84 446 Gene3D G3DSA:1.10.287.470 104 134 5.9E-7 T 13-10-2018 VEA_001279 855d70c9623e069799317b0f6c660f84 446 Pfam PF13533 Biotin-lipoyl like 79 115 5.5E-7 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VEA_001279 855d70c9623e069799317b0f6c660f84 446 SUPERFAMILY SSF111369 72 127 1.83E-5 T 13-10-2018 VEA_001279 855d70c9623e069799317b0f6c660f84 446 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 30 446 6.0E-101 T 13-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 VEA_001279 855d70c9623e069799317b0f6c660f84 446 Pfam PF13437 HlyD family secretion protein 301 408 1.0E-17 T 13-10-2018 VEA_001974 1a0f95f1697a2eaa52b91f8037a7f190 517 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 67 424 2.4E-84 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain VEA_001974 1a0f95f1697a2eaa52b91f8037a7f190 517 PIRSF PIRSF002741 21 512 1.3E-92 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VEA_001974 1a0f95f1697a2eaa52b91f8037a7f190 517 Gene3D G3DSA:3.90.76.10 57 165 7.3E-123 T 13-10-2018 VEA_001974 1a0f95f1697a2eaa52b91f8037a7f190 517 SUPERFAMILY SSF53850 26 516 1.39E-129 T 13-10-2018 VEA_001974 1a0f95f1697a2eaa52b91f8037a7f190 517 Gene3D G3DSA:3.10.105.10 279 494 7.3E-123 T 13-10-2018 VEA_001974 1a0f95f1697a2eaa52b91f8037a7f190 517 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 72 93 - T 13-10-2018 IPR023765 Solute-binding protein family 5, conserved site VEA_001974 1a0f95f1697a2eaa52b91f8037a7f190 517 Gene3D G3DSA:3.40.190.10 32 278 7.3E-123 T 13-10-2018 VEA_001293 2a211b03ccd7a9fa445150d2aa5876fc 478 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 274 285 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VEA_001293 2a211b03ccd7a9fa445150d2aa5876fc 478 Pfam PF00171 Aldehyde dehydrogenase family 12 468 1.7E-148 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VEA_001293 2a211b03ccd7a9fa445150d2aa5876fc 478 Gene3D G3DSA:3.40.309.10 251 438 5.4E-152 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VEA_001293 2a211b03ccd7a9fa445150d2aa5876fc 478 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 246 253 - T 13-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VEA_001293 2a211b03ccd7a9fa445150d2aa5876fc 478 Gene3D G3DSA:3.40.605.10 8 466 5.4E-152 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VEA_001293 2a211b03ccd7a9fa445150d2aa5876fc 478 SUPERFAMILY SSF53720 2 472 1.7E-141 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VEA_000911 b40d00836eec6eea4e9fb73e75074231 257 Pfam PF04954 Siderophore-interacting protein 127 239 1.8E-31 T 13-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain VEA_000911 b40d00836eec6eea4e9fb73e75074231 257 Gene3D G3DSA:2.40.30.10 1 119 2.2E-32 T 13-10-2018 VEA_000911 b40d00836eec6eea4e9fb73e75074231 257 Gene3D G3DSA:3.40.50.80 122 257 3.3E-45 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VEA_000911 b40d00836eec6eea4e9fb73e75074231 257 Pfam PF08021 Siderophore-interacting FAD-binding domain 12 119 2.2E-32 T 13-10-2018 IPR013113 FAD-binding 9, siderophore-interacting VEA_000911 b40d00836eec6eea4e9fb73e75074231 257 SUPERFAMILY SSF63380 4 117 2.69E-11 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VEA_002912 60463d804cc4773e36f0e08bf8fd1aca 337 Gene3D G3DSA:3.40.50.1170 1 209 3.5E-93 T 13-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 VEA_002912 60463d804cc4773e36f0e08bf8fd1aca 337 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 4 336 3.0E-117 T 13-10-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 VEA_002912 60463d804cc4773e36f0e08bf8fd1aca 337 PRINTS PR00139 Asparaginase/glutaminase family signature 261 279 8.4E-17 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VEA_002912 60463d804cc4773e36f0e08bf8fd1aca 337 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 8.4E-17 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VEA_002912 60463d804cc4773e36f0e08bf8fd1aca 337 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 8.4E-17 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VEA_002912 60463d804cc4773e36f0e08bf8fd1aca 337 PIRSF PIRSF500176 2 333 1.1E-109 T 13-10-2018 VEA_002912 60463d804cc4773e36f0e08bf8fd1aca 337 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 13-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 VEA_002912 60463d804cc4773e36f0e08bf8fd1aca 337 Gene3D G3DSA:3.40.50.40 210 337 5.0E-45 T 13-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 VEA_002912 60463d804cc4773e36f0e08bf8fd1aca 337 SMART SM00870 5 324 3.5E-141 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VEA_002912 60463d804cc4773e36f0e08bf8fd1aca 337 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 13-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 VEA_002912 60463d804cc4773e36f0e08bf8fd1aca 337 SUPERFAMILY SSF53774 3 336 5.5E-115 T 13-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 VEA_002912 60463d804cc4773e36f0e08bf8fd1aca 337 PIRSF PIRSF001220 1 335 1.2E-95 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VEA_002912 60463d804cc4773e36f0e08bf8fd1aca 337 Pfam PF00710 Asparaginase, N-terminal 5 191 2.5E-67 T 13-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 VEA_001341 7722dd2b1c0ddaa8df465284338ad7ab 276 SUPERFAMILY SSF52402 2 276 8.38E-80 T 13-10-2018 VEA_001341 7722dd2b1c0ddaa8df465284338ad7ab 276 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 16 274 46.824 T 13-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 VEA_001341 7722dd2b1c0ddaa8df465284338ad7ab 276 Pfam PF02540 NAD synthase 21 270 1.6E-64 T 13-10-2018 IPR022310 NAD/GMP synthase VEA_001341 7722dd2b1c0ddaa8df465284338ad7ab 276 Gene3D G3DSA:3.40.50.620 1 276 2.0E-81 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_001341 7722dd2b1c0ddaa8df465284338ad7ab 276 TIGRFAM TIGR00552 nadE: NAD+ synthetase 20 272 1.5E-65 T 13-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 VEA_002761 325fd5834406aad8195fb81d7c088a9f 211 Pfam PF01351 Ribonuclease HII 27 203 1.0E-39 T 13-10-2018 IPR024567 Ribonuclease HII/HIII domain VEA_002761 325fd5834406aad8195fb81d7c088a9f 211 Hamap MF_00052_B Ribonuclease HII [rnhB]. 25 204 37.853 T 13-10-2018 IPR022898 Ribonuclease HII GO:0004523 VEA_002761 325fd5834406aad8195fb81d7c088a9f 211 SUPERFAMILY SSF53098 19 209 4.86E-71 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VEA_002761 325fd5834406aad8195fb81d7c088a9f 211 Gene3D G3DSA:3.30.420.10 7 210 5.9E-79 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VEA_000483 c6e8df4f2bcbdaaabf4b78af91c9ae70 249 SUPERFAMILY SSF69572 4 249 3.79E-86 T 13-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 VEA_000483 c6e8df4f2bcbdaaabf4b78af91c9ae70 249 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 8 248 2.1E-134 T 13-10-2018 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823 VEA_000483 c6e8df4f2bcbdaaabf4b78af91c9ae70 249 Pfam PF00899 ThiF family 12 245 6.7E-65 T 13-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VEA_000483 c6e8df4f2bcbdaaabf4b78af91c9ae70 249 Gene3D G3DSA:3.40.50.720 4 249 4.4E-86 T 13-10-2018 VEA_000770 d7ca4162def059dad0ad4e4a159177a7 342 SMART SM00354 12 82 9.7E-28 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEA_000770 d7ca4162def059dad0ad4e4a159177a7 342 Gene3D G3DSA:3.40.50.2300 74 318 2.3E-82 T 13-10-2018 VEA_000770 d7ca4162def059dad0ad4e4a159177a7 342 SUPERFAMILY SSF53822 70 333 3.85E-49 T 13-10-2018 IPR028082 Periplasmic binding protein-like I VEA_000770 d7ca4162def059dad0ad4e4a159177a7 342 Pfam PF13377 Periplasmic binding protein-like domain 179 339 1.4E-26 T 13-10-2018 VEA_000770 d7ca4162def059dad0ad4e4a159177a7 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 59 5.5E-18 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEA_000770 d7ca4162def059dad0ad4e4a159177a7 342 SUPERFAMILY SSF47413 12 70 4.31E-16 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEA_000770 d7ca4162def059dad0ad4e4a159177a7 342 Gene3D G3DSA:1.10.260.40 5 70 6.5E-22 T 13-10-2018 VEA_000770 d7ca4162def059dad0ad4e4a159177a7 342 Gene3D G3DSA:3.40.50.2300 168 301 2.3E-82 T 13-10-2018 VEA_000770 d7ca4162def059dad0ad4e4a159177a7 342 ProSitePatterns PS00356 LacI-type HTH domain signature. 15 33 - T 13-10-2018 VEA_001277 eff6e92def07270f72a20a8f37baa818 196 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 63 81 - T 13-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VEA_001277 eff6e92def07270f72a20a8f37baa818 196 Gene3D G3DSA:2.150.10.10 23 69 1.1E-8 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VEA_001277 eff6e92def07270f72a20a8f37baa818 196 PRINTS PR00313 NodO calcium binding signature 76 84 4.9E-11 T 13-10-2018 VEA_001277 eff6e92def07270f72a20a8f37baa818 196 PRINTS PR00313 NodO calcium binding signature 94 103 4.9E-11 T 13-10-2018 VEA_001277 eff6e92def07270f72a20a8f37baa818 196 PRINTS PR00313 NodO calcium binding signature 46 57 4.9E-11 T 13-10-2018 VEA_001277 eff6e92def07270f72a20a8f37baa818 196 PRINTS PR00313 NodO calcium binding signature 58 66 4.9E-11 T 13-10-2018 VEA_001277 eff6e92def07270f72a20a8f37baa818 196 Gene3D G3DSA:2.150.10.10 70 192 1.5E-16 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VEA_001277 eff6e92def07270f72a20a8f37baa818 196 SUPERFAMILY SSF51120 2 175 2.24E-22 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VEA_001277 eff6e92def07270f72a20a8f37baa818 196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 48 65 0.0027 T 13-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VEA_001277 eff6e92def07270f72a20a8f37baa818 196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 33 47 1.1 T 13-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VEA_001277 eff6e92def07270f72a20a8f37baa818 196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 103 117 2.0 T 13-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VEA_001277 eff6e92def07270f72a20a8f37baa818 196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3 15 21.0 T 13-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VEA_001277 eff6e92def07270f72a20a8f37baa818 196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 85 101 4.3 T 13-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VEA_001277 eff6e92def07270f72a20a8f37baa818 196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 67 83 0.22 T 13-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VEA_003304 fc16415520a2bc2af92cb3dd3cce5fe5 98 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 69 1.1E-8 T 13-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain VEA_003304 fc16415520a2bc2af92cb3dd3cce5fe5 98 SUPERFAMILY SSF54909 1 71 4.34E-12 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel VEA_003304 fc16415520a2bc2af92cb3dd3cce5fe5 98 Gene3D G3DSA:3.30.70.100 3 96 2.4E-10 T 13-10-2018 VEA_004068 13ce1f67bc29f9844fd72ef2475dd755 122 Gene3D G3DSA:3.10.129.10 3 122 3.3E-33 T 13-10-2018 VEA_004068 13ce1f67bc29f9844fd72ef2475dd755 122 SUPERFAMILY SSF54637 12 109 2.16E-15 T 13-10-2018 IPR029069 HotDog domain superfamily VEA_004068 13ce1f67bc29f9844fd72ef2475dd755 122 PIRSF PIRSF030962 1 122 4.4E-50 T 13-10-2018 IPR016962 Dehydrase, ECs4332, predicted KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VEA_004388 7749cd820771bf40b923c665e9f78945 59 SUPERFAMILY SSF54862 3 48 5.93E-8 T 13-10-2018 VEA_004388 7749cd820771bf40b923c665e9f78945 59 Gene3D G3DSA:3.30.70.20 1 58 5.8E-20 T 13-10-2018 VEA_004436 4ccb25127677bd52e2aed60bec345245 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 402 419 2.7E-5 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEA_004436 4ccb25127677bd52e2aed60bec345245 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 439 2.7E-5 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEA_004436 4ccb25127677bd52e2aed60bec345245 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VEA_004436 4ccb25127677bd52e2aed60bec345245 444 SUPERFAMILY SSF52540 146 380 2.95E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_004436 4ccb25127677bd52e2aed60bec345245 444 SUPERFAMILY SSF52172 27 190 2.19E-7 T 13-10-2018 IPR011006 CheY-like superfamily VEA_004436 4ccb25127677bd52e2aed60bec345245 444 Gene3D G3DSA:1.10.8.60 310 386 3.3E-23 T 13-10-2018 VEA_004436 4ccb25127677bd52e2aed60bec345245 444 Gene3D G3DSA:3.40.50.300 145 309 1.9E-39 T 13-10-2018 VEA_004436 4ccb25127677bd52e2aed60bec345245 444 Pfam PF00158 Sigma-54 interaction domain 146 305 6.6E-37 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VEA_004436 4ccb25127677bd52e2aed60bec345245 444 Gene3D G3DSA:1.10.10.60 387 440 1.0E-12 T 13-10-2018 VEA_004436 4ccb25127677bd52e2aed60bec345245 444 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VEA_004436 4ccb25127677bd52e2aed60bec345245 444 SUPERFAMILY SSF46689 352 438 5.38E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_004436 4ccb25127677bd52e2aed60bec345245 444 SMART SM00382 166 306 0.0023 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_004436 4ccb25127677bd52e2aed60bec345245 444 Pfam PF02954 Bacterial regulatory protein, Fis family 396 435 3.7E-8 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEA_001693 8b0446dc6c91bc84733c046b81496809 1254 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 919 1253 3.1E-64 T 13-10-2018 IPR007452 Translocation and assembly module TamB VEA_003218 234c586258427842c5c180905f8e3b47 209 SUPERFAMILY SSF52540 42 167 3.49E-13 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003218 234c586258427842c5c180905f8e3b47 209 Gene3D G3DSA:3.40.50.300 38 187 1.1E-13 T 13-10-2018 VEA_003242 44fcf72dcb8e46ad2b054a397345d765 1149 Pfam PF00271 Helicase conserved C-terminal domain 820 940 6.2E-8 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_003242 44fcf72dcb8e46ad2b054a397345d765 1149 SUPERFAMILY SSF52540 619 987 1.16E-33 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003242 44fcf72dcb8e46ad2b054a397345d765 1149 SMART SM00490 848 940 8.3E-6 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_003242 44fcf72dcb8e46ad2b054a397345d765 1149 Pfam PF04471 Restriction endonuclease 1009 1126 6.0E-10 T 13-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 VEA_003242 44fcf72dcb8e46ad2b054a397345d765 1149 Gene3D G3DSA:3.40.50.10810 442 721 2.3E-55 T 13-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily VEA_003242 44fcf72dcb8e46ad2b054a397345d765 1149 SUPERFAMILY SSF52540 450 701 3.62E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003242 44fcf72dcb8e46ad2b054a397345d765 1149 SMART SM00487 456 685 4.9E-25 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEA_003242 44fcf72dcb8e46ad2b054a397345d765 1149 Gene3D G3DSA:3.40.50.300 752 990 5.3E-37 T 13-10-2018 VEA_003242 44fcf72dcb8e46ad2b054a397345d765 1149 SUPERFAMILY SSF52980 1013 1132 3.7E-7 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VEA_003242 44fcf72dcb8e46ad2b054a397345d765 1149 Pfam PF00176 SNF2 family N-terminal domain 477 736 1.3E-37 T 13-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 VEA_004415 f2840f4daf0542067d0f58cd9a80d77c 141 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 2 79 8.3E-6 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I VEA_004415 f2840f4daf0542067d0f58cd9a80d77c 141 SMART SM00226 1 117 0.0039 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I VEA_004415 f2840f4daf0542067d0f58cd9a80d77c 141 Gene3D G3DSA:3.40.50.2300 1 122 5.1E-15 T 13-10-2018 VEA_004415 f2840f4daf0542067d0f58cd9a80d77c 141 SUPERFAMILY SSF52788 2 122 3.4E-16 T 13-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily VEA_001400 c90098cd38941d64008b262adfb05773 304 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 83 238 8.6E-8 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VEA_001400 c90098cd38941d64008b262adfb05773 304 SUPERFAMILY SSF56219 71 299 1.26E-24 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VEA_001400 c90098cd38941d64008b262adfb05773 304 Gene3D G3DSA:3.60.10.10 77 302 5.4E-21 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VEA_002518 440a611f50f4ed302d43759edc745c96 160 Gene3D G3DSA:3.90.950.20 1 160 5.2E-59 T 13-10-2018 IPR036653 CinA-like, C-terminal VEA_002518 440a611f50f4ed302d43759edc745c96 160 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 12 158 3.2E-49 T 13-10-2018 IPR008136 CinA, C-terminal VEA_002518 440a611f50f4ed302d43759edc745c96 160 SUPERFAMILY SSF142433 4 159 2.22E-57 T 13-10-2018 IPR036653 CinA-like, C-terminal VEA_002518 440a611f50f4ed302d43759edc745c96 160 Pfam PF02464 Competence-damaged protein 5 158 1.9E-57 T 13-10-2018 IPR008136 CinA, C-terminal VEA_001437 157e4b97c8906cd821830c65a77f786a 352 Pfam PF13609 Gram-negative porin 8 335 2.7E-15 T 13-10-2018 VEA_001437 157e4b97c8906cd821830c65a77f786a 352 Gene3D G3DSA:2.40.160.10 22 352 4.3E-52 T 13-10-2018 IPR023614 Porin domain superfamily VEA_001437 157e4b97c8906cd821830c65a77f786a 352 SUPERFAMILY SSF56935 22 351 1.73E-50 T 13-10-2018 VEA_002691 b73f5464340f45644f5b608b9493e95c 269 Pfam PF00899 ThiF family 24 195 5.3E-38 T 13-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VEA_002691 b73f5464340f45644f5b608b9493e95c 269 Gene3D G3DSA:3.40.50.720 5 269 1.6E-109 T 13-10-2018 VEA_002691 b73f5464340f45644f5b608b9493e95c 269 SUPERFAMILY SSF69572 9 268 3.79E-64 T 13-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 VEA_003688 ac947c456e8667189d09d092b130ba29 342 Gene3D G3DSA:3.40.630.10 1 342 1.5E-122 T 13-10-2018 VEA_003688 ac947c456e8667189d09d092b130ba29 342 SUPERFAMILY SSF53187 9 329 1.01E-75 T 13-10-2018 VEA_003688 ac947c456e8667189d09d092b130ba29 342 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 342 132.297 T 13-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 VEA_003688 ac947c456e8667189d09d092b130ba29 342 PIRSF PIRSF017020 4 336 7.5E-126 T 13-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 VEA_003688 ac947c456e8667189d09d092b130ba29 342 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 53 330 3.7E-70 T 13-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VEA_002739 76fe470cd33c098bb199101f75e41b5f 99 Pfam PF11743 Protein of unknown function (DUF3301) 6 96 3.0E-30 T 13-10-2018 IPR021732 Protein of unknown function DUF3301 VEA_002678 c374431c4b284896e255fd3499c5612c 351 Gene3D G3DSA:3.20.20.190 21 350 7.8E-124 T 13-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VEA_002678 c374431c4b284896e255fd3499c5612c 351 SUPERFAMILY SSF51695 22 349 6.28E-91 T 13-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VEA_002678 c374431c4b284896e255fd3499c5612c 351 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 28 344 1.2E-63 T 13-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 VEA_002575 18094f7de18d3b79c449a14f90b06747 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 68 254 5.2E-15 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_002575 18094f7de18d3b79c449a14f90b06747 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 342 533 4.6E-7 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_002575 18094f7de18d3b79c449a14f90b06747 541 SUPERFAMILY SSF161098 282 535 1.96E-38 T 13-10-2018 IPR035906 MetI-like superfamily VEA_002575 18094f7de18d3b79c449a14f90b06747 541 Gene3D G3DSA:1.10.3720.10 285 540 8.0E-34 T 13-10-2018 IPR035906 MetI-like superfamily VEA_002575 18094f7de18d3b79c449a14f90b06747 541 SUPERFAMILY SSF161098 9 258 8.72E-44 T 13-10-2018 IPR035906 MetI-like superfamily VEA_002575 18094f7de18d3b79c449a14f90b06747 541 Gene3D G3DSA:1.10.3720.10 10 267 1.9E-53 T 13-10-2018 IPR035906 MetI-like superfamily VEA_001108 e498add9f5e7d19f460d59050b05baf2 238 Gene3D G3DSA:3.40.30.10 68 238 4.3E-34 T 13-10-2018 VEA_001108 e498add9f5e7d19f460d59050b05baf2 238 SUPERFAMILY SSF52833 70 233 1.68E-31 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VEA_001108 e498add9f5e7d19f460d59050b05baf2 238 Pfam PF13462 Thioredoxin 77 234 1.3E-17 T 13-10-2018 IPR012336 Thioredoxin-like fold VEA_003725 ab93020b24683807ce8da907dbd9900e 126 Gene3D G3DSA:1.20.120.1630 1 126 4.3E-22 T 13-10-2018 VEA_003725 ab93020b24683807ce8da907dbd9900e 126 Pfam PF04191 Phospholipid methyltransferase 14 115 2.0E-13 T 13-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 VEA_003725 ab93020b24683807ce8da907dbd9900e 126 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 94 126 3.0E-11 T 13-10-2018 VEA_004264 7713a4572c60fbe755ebb358a00bbb75 217 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 202 8.1E-66 T 13-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VEA_004264 7713a4572c60fbe755ebb358a00bbb75 217 Gene3D G3DSA:2.40.30.20 1 89 1.1E-27 T 13-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEA_004264 7713a4572c60fbe755ebb358a00bbb75 217 PIRSF PIRSF000498 1 211 3.4E-81 T 13-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VEA_004264 7713a4572c60fbe755ebb358a00bbb75 217 SUPERFAMILY SSF63380 1 89 1.02E-25 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VEA_004264 7713a4572c60fbe755ebb358a00bbb75 217 SUPERFAMILY SSF63380 93 198 2.21E-32 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VEA_004264 7713a4572c60fbe755ebb358a00bbb75 217 Pfam PF00677 Lumazine binding domain 3 87 2.7E-21 T 13-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VEA_004264 7713a4572c60fbe755ebb358a00bbb75 217 Pfam PF00677 Lumazine binding domain 100 184 9.9E-24 T 13-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VEA_004264 7713a4572c60fbe755ebb358a00bbb75 217 Gene3D G3DSA:2.40.30.20 102 205 1.5E-35 T 13-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEA_000224 da35dafbb6ac8df067b5d0d45375388b 579 Pfam PF02378 Phosphotransferase system, EIIC 249 512 3.8E-17 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VEA_000224 da35dafbb6ac8df067b5d0d45375388b 579 Gene3D G3DSA:3.40.50.2300 1 103 1.1E-24 T 13-10-2018 VEA_000224 da35dafbb6ac8df067b5d0d45375388b 579 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 126 213 2.9E-17 T 13-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VEA_000224 da35dafbb6ac8df067b5d0d45375388b 579 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 95 2.4E-12 T 13-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VEA_000224 da35dafbb6ac8df067b5d0d45375388b 579 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 125 208 1.0E-36 T 13-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 VEA_000224 da35dafbb6ac8df067b5d0d45375388b 579 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 231 568 1.6E-142 T 13-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 VEA_000224 da35dafbb6ac8df067b5d0d45375388b 579 SUPERFAMILY SSF52794 123 224 2.79E-37 T 13-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VEA_000224 da35dafbb6ac8df067b5d0d45375388b 579 Gene3D G3DSA:3.40.50.2300 114 224 4.1E-41 T 13-10-2018 VEA_000224 da35dafbb6ac8df067b5d0d45375388b 579 SUPERFAMILY SSF52794 2 101 1.4E-28 T 13-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VEA_001888 28818f8325dc427b1c139c628fe19ddc 200 SUPERFAMILY SSF54523 7 101 3.06E-10 T 13-10-2018 VEA_001888 28818f8325dc427b1c139c628fe19ddc 200 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 3 178 2.9E-13 T 13-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VEA_001888 28818f8325dc427b1c139c628fe19ddc 200 PRINTS PR00885 Bacterial general secretion pathway protein H signature 17 31 5.8E-21 T 13-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VEA_001888 28818f8325dc427b1c139c628fe19ddc 200 PRINTS PR00885 Bacterial general secretion pathway protein H signature 2 16 5.8E-21 T 13-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VEA_001888 28818f8325dc427b1c139c628fe19ddc 200 PRINTS PR00885 Bacterial general secretion pathway protein H signature 144 159 5.8E-21 T 13-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VEA_001888 28818f8325dc427b1c139c628fe19ddc 200 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 5.6E-7 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEA_001888 28818f8325dc427b1c139c628fe19ddc 200 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 3.8E-6 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEA_001888 28818f8325dc427b1c139c628fe19ddc 200 Gene3D G3DSA:3.55.40.10 33 200 4.6E-46 T 13-10-2018 VEA_001888 28818f8325dc427b1c139c628fe19ddc 200 Pfam PF12019 Type II transport protein GspH 42 181 2.8E-9 T 13-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 VEA_003180 893428e7d3ae4cfe31dab257865eceb6 96 ProSitePatterns PS00893 Nudix box signature. 50 71 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VEA_003180 893428e7d3ae4cfe31dab257865eceb6 96 SUPERFAMILY SSF55811 9 84 1.62E-24 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VEA_003180 893428e7d3ae4cfe31dab257865eceb6 96 PRINTS PR00502 NUDIX hydrolase family signature 59 74 6.4E-7 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VEA_003180 893428e7d3ae4cfe31dab257865eceb6 96 PRINTS PR00502 NUDIX hydrolase family signature 45 59 6.4E-7 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VEA_003180 893428e7d3ae4cfe31dab257865eceb6 96 Pfam PF00293 NUDIX domain 22 82 1.5E-16 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VEA_003180 893428e7d3ae4cfe31dab257865eceb6 96 Gene3D G3DSA:3.90.79.10 2 96 4.8E-32 T 13-10-2018 VEA_000600 a1ac469d9b1df72ce1d3dee8aa042c33 328 Gene3D G3DSA:3.40.50.2300 164 286 2.1E-62 T 13-10-2018 VEA_000600 a1ac469d9b1df72ce1d3dee8aa042c33 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.1E-6 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEA_000600 a1ac469d9b1df72ce1d3dee8aa042c33 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.1E-6 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEA_000600 a1ac469d9b1df72ce1d3dee8aa042c33 328 Gene3D G3DSA:1.10.260.40 1 58 8.9E-23 T 13-10-2018 VEA_000600 a1ac469d9b1df72ce1d3dee8aa042c33 328 SUPERFAMILY SSF53822 58 316 1.47E-58 T 13-10-2018 IPR028082 Periplasmic binding protein-like I VEA_000600 a1ac469d9b1df72ce1d3dee8aa042c33 328 SMART SM00354 1 71 3.6E-38 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEA_000600 a1ac469d9b1df72ce1d3dee8aa042c33 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 1.2E-20 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VEA_000600 a1ac469d9b1df72ce1d3dee8aa042c33 328 Gene3D G3DSA:3.40.50.2300 65 309 2.1E-62 T 13-10-2018 VEA_000600 a1ac469d9b1df72ce1d3dee8aa042c33 328 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 13-10-2018 VEA_000600 a1ac469d9b1df72ce1d3dee8aa042c33 328 Pfam PF13377 Periplasmic binding protein-like domain 170 328 3.2E-26 T 13-10-2018 VEA_000600 a1ac469d9b1df72ce1d3dee8aa042c33 328 SUPERFAMILY SSF47413 1 60 6.22E-18 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEA_001448 061c40d02ea39a42ed79048d49bd0dbf 295 SUPERFAMILY SSF81452 5 295 2.83E-77 T 13-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001448 061c40d02ea39a42ed79048d49bd0dbf 295 Gene3D G3DSA:1.10.287.70 1 79 3.2E-17 T 13-10-2018 VEA_001448 061c40d02ea39a42ed79048d49bd0dbf 295 Gene3D G3DSA:1.20.120.80 80 295 7.1E-62 T 13-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001448 061c40d02ea39a42ed79048d49bd0dbf 295 Pfam PF00510 Cytochrome c oxidase subunit III 9 294 3.1E-48 T 13-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_002007 b3de6239438051d5998ad30d4d00802f 359 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 356 6.0E-121 T 13-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 VEA_002007 b3de6239438051d5998ad30d4d00802f 359 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 359 98.742 T 13-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 VEA_002007 b3de6239438051d5998ad30d4d00802f 359 ProSitePatterns PS00618 RecF protein signature 2. 299 317 - T 13-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 VEA_002007 b3de6239438051d5998ad30d4d00802f 359 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 354 5.7E-37 T 13-10-2018 IPR003395 RecF/RecN/SMC, N-terminal VEA_002007 b3de6239438051d5998ad30d4d00802f 359 SUPERFAMILY SSF52540 1 344 1.4E-41 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002007 b3de6239438051d5998ad30d4d00802f 359 ProSitePatterns PS00617 RecF protein signature 1. 118 138 - T 13-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 VEA_002007 b3de6239438051d5998ad30d4d00802f 359 Gene3D G3DSA:1.20.1050.90 121 298 4.7E-83 T 13-10-2018 VEA_002007 b3de6239438051d5998ad30d4d00802f 359 Gene3D G3DSA:3.40.50.300 8 332 4.7E-83 T 13-10-2018 VEA_004342 41298d4b1f50284a205cdade9409b67b 443 Pfam PF02601 Exonuclease VII, large subunit 126 440 9.2E-102 T 13-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 VEA_004342 41298d4b1f50284a205cdade9409b67b 443 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 355 1.1E-134 T 13-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 VEA_004342 41298d4b1f50284a205cdade9409b67b 443 Pfam PF13742 OB-fold nucleic acid binding domain 10 103 4.8E-30 T 13-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 VEA_004342 41298d4b1f50284a205cdade9409b67b 443 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 443 31.498 T 13-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 VEA_001993 d074df7a76c222a9610288b1ca8da0e2 82 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 13-10-2018 IPR001455 TusA-like domain VEA_001993 d074df7a76c222a9610288b1ca8da0e2 82 Pfam PF01206 Sulfurtransferase TusA 10 79 1.2E-22 T 13-10-2018 IPR001455 TusA-like domain VEA_001993 d074df7a76c222a9610288b1ca8da0e2 82 SUPERFAMILY SSF64307 9 80 5.1E-25 T 13-10-2018 IPR036868 TusA-like domain superfamily VEA_001993 d074df7a76c222a9610288b1ca8da0e2 82 Hamap MF_00413 Sulfur carrier protein TusA [tusA]. 3 81 28.841 T 13-10-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 VEA_001993 d074df7a76c222a9610288b1ca8da0e2 82 Gene3D G3DSA:3.30.110.40 5 80 1.6E-28 T 13-10-2018 IPR036868 TusA-like domain superfamily VEA_002905 943cf4b63ae9e0d85d5b0b85f193b599 275 PIRSF PIRSF018249 1 274 2.1E-85 T 13-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 VEA_002905 943cf4b63ae9e0d85d5b0b85f193b599 275 Gene3D G3DSA:3.40.50.150 1 273 1.4E-78 T 13-10-2018 VEA_002905 943cf4b63ae9e0d85d5b0b85f193b599 275 SUPERFAMILY SSF53335 4 258 6.66E-44 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_002905 943cf4b63ae9e0d85d5b0b85f193b599 275 Pfam PF13847 Methyltransferase domain 86 210 2.9E-15 T 13-10-2018 IPR025714 Methyltransferase domain VEA_001882 1ee419a3263888969590442f70aaa67f 253 Pfam PF01203 Type II secretion system (T2SS), protein N 37 248 4.3E-58 T 13-10-2018 IPR022792 Type II secretion system, protein N VEA_000431 cb40aa3373d0be6ad879f19a4e633fd7 166 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 2 152 2.2E-40 T 13-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN VEA_000431 cb40aa3373d0be6ad879f19a4e633fd7 166 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 12 149 8.0E-34 T 13-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN VEA_000431 cb40aa3373d0be6ad879f19a4e633fd7 166 Gene3D G3DSA:2.60.40.4150 28 164 3.2E-31 T 13-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily VEA_002595 89632a6fe52be3b9fc4fd825334b8c06 353 SUPERFAMILY SSF51261 68 314 8.89E-72 T 13-10-2018 IPR011055 Duplicated hybrid motif VEA_002595 89632a6fe52be3b9fc4fd825334b8c06 353 Gene3D G3DSA:3.10.450.350 1 82 4.3E-9 T 13-10-2018 VEA_002595 89632a6fe52be3b9fc4fd825334b8c06 353 Gene3D G3DSA:2.70.70.10 190 319 6.7E-81 T 13-10-2018 IPR011055 Duplicated hybrid motif VEA_002595 89632a6fe52be3b9fc4fd825334b8c06 353 Pfam PF01551 Peptidase family M23 219 313 2.9E-31 T 13-10-2018 IPR016047 Peptidase M23 VEA_002595 89632a6fe52be3b9fc4fd825334b8c06 353 Gene3D G3DSA:3.10.450.350 96 334 6.7E-81 T 13-10-2018 VEA_000642 4dbba3853097a42c5fa60ca80090a97d 204 Pfam PF01810 LysE type translocator 15 202 4.4E-25 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEA_000642 4dbba3853097a42c5fa60ca80090a97d 204 PIRSF PIRSF006324 1 204 1.6E-49 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEA_003138 964634077f15c9da6dbeed6607dc4e18 450 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 1 447 3.6E-165 T 13-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VEA_003138 964634077f15c9da6dbeed6607dc4e18 450 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 2 447 8.3E-134 T 13-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VEA_003138 964634077f15c9da6dbeed6607dc4e18 450 ProSitePatterns PS01303 BCCT family of transporters signature. 263 272 - T 13-10-2018 IPR018093 BCCT transporter, conserved site VEA_002696 7a2053b28d1d91ff586115a9930342a1 296 Gene3D G3DSA:3.40.50.720 1 166 2.3E-52 T 13-10-2018 VEA_002696 7a2053b28d1d91ff586115a9930342a1 296 SUPERFAMILY SSF51735 2 165 1.42E-56 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_002696 7a2053b28d1d91ff586115a9930342a1 296 Gene3D G3DSA:1.10.1040.10 167 296 1.6E-42 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VEA_002696 7a2053b28d1d91ff586115a9930342a1 296 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 292 1.2E-81 T 13-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 VEA_002696 7a2053b28d1d91ff586115a9930342a1 296 SUPERFAMILY SSF48179 168 290 3.2E-33 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VEA_002696 7a2053b28d1d91ff586115a9930342a1 296 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 168 290 1.0E-36 T 13-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain VEA_002696 7a2053b28d1d91ff586115a9930342a1 296 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 141 5.3E-32 T 13-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain VEA_002002 57b4302110d8d534550bf1426b94a576 417 Gene3D G3DSA:3.40.640.10 1 415 7.9E-150 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_002002 57b4302110d8d534550bf1426b94a576 417 Pfam PF00155 Aminotransferase class I and II 67 401 3.0E-28 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VEA_002002 57b4302110d8d534550bf1426b94a576 417 SUPERFAMILY SSF53383 13 411 1.26E-61 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_004151 7140c6a2a15b286e78395bb72c78fe25 153 Pfam PF01957 NfeD-like C-terminal, partner-binding 14 151 1.3E-25 T 13-10-2018 IPR002810 NfeD-like, C-terminal domain VEA_004151 7140c6a2a15b286e78395bb72c78fe25 153 SUPERFAMILY SSF141322 93 149 1.83E-5 T 13-10-2018 VEA_004151 7140c6a2a15b286e78395bb72c78fe25 153 Gene3D G3DSA:2.40.50.140 82 153 6.1E-10 T 13-10-2018 VEA_000757 c7f0ed5ce98d00e7369df13ee19ce8a1 466 Gene3D G3DSA:3.30.9.10 124 354 1.8E-62 T 13-10-2018 VEA_000757 c7f0ed5ce98d00e7369df13ee19ce8a1 466 SUPERFAMILY SSF51905 17 308 1.48E-36 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_000757 c7f0ed5ce98d00e7369df13ee19ce8a1 466 TIGRFAM TIGR03329 Phn_aa_oxid: putative aminophosphonate oxidoreductase 5 464 9.1E-248 T 13-10-2018 IPR017715 Putative aminophosphonate oxidoreductase VEA_000757 c7f0ed5ce98d00e7369df13ee19ce8a1 466 Pfam PF01266 FAD dependent oxidoreductase 30 393 6.5E-50 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VEA_000757 c7f0ed5ce98d00e7369df13ee19ce8a1 466 Gene3D G3DSA:3.50.50.60 30 395 1.8E-62 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_001168 f5623e3684c8d4bd2e9d14212368b11f 166 Pfam PF03748 Flagellar basal body-associated protein FliL 67 166 3.7E-14 T 13-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 VEA_003008 052232a6c781908ef5d3ccfd532c4b2d 196 Gene3D G3DSA:2.40.160.20 27 196 1.7E-14 T 13-10-2018 VEA_003008 052232a6c781908ef5d3ccfd532c4b2d 196 Pfam PF13505 Outer membrane protein beta-barrel domain 26 196 1.3E-7 T 13-10-2018 IPR027385 Outer membrane protein beta-barrel VEA_003008 052232a6c781908ef5d3ccfd532c4b2d 196 SUPERFAMILY SSF56925 23 196 1.54E-19 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VEA_004240 b0052d59ad6cfa605da957bd062a674c 269 PIRSF PIRSF002854 1 269 1.4E-99 T 13-10-2018 IPR004872 Lipoprotein NlpA family VEA_004240 b0052d59ad6cfa605da957bd062a674c 269 Gene3D G3DSA:3.40.190.10 115 219 6.9E-94 T 13-10-2018 VEA_004240 b0052d59ad6cfa605da957bd062a674c 269 Gene3D G3DSA:3.40.190.10 34 263 6.9E-94 T 13-10-2018 VEA_004240 b0052d59ad6cfa605da957bd062a674c 269 Pfam PF03180 NLPA lipoprotein 33 269 3.9E-98 T 13-10-2018 IPR004872 Lipoprotein NlpA family VEA_004240 b0052d59ad6cfa605da957bd062a674c 269 SUPERFAMILY SSF53850 32 269 1.6E-78 T 13-10-2018 VEA_004240 b0052d59ad6cfa605da957bd062a674c 269 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 15 269 3.5E-126 T 13-10-2018 IPR004872 Lipoprotein NlpA family VEA_001420 b675625122d9e48d5afb0ab6a7997d7c 385 Pfam PF03222 Tryptophan/tyrosine permease family 4 381 1.1E-76 T 13-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 VEA_001420 b675625122d9e48d5afb0ab6a7997d7c 385 PRINTS PR00166 Aromatic amino acid permease signature 147 167 9.3E-36 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VEA_001420 b675625122d9e48d5afb0ab6a7997d7c 385 PRINTS PR00166 Aromatic amino acid permease signature 37 56 9.3E-36 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VEA_001420 b675625122d9e48d5afb0ab6a7997d7c 385 PRINTS PR00166 Aromatic amino acid permease signature 182 204 9.3E-36 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VEA_001420 b675625122d9e48d5afb0ab6a7997d7c 385 PRINTS PR00166 Aromatic amino acid permease signature 10 33 9.3E-36 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VEA_001420 b675625122d9e48d5afb0ab6a7997d7c 385 PRINTS PR00166 Aromatic amino acid permease signature 327 346 9.3E-36 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VEA_001420 b675625122d9e48d5afb0ab6a7997d7c 385 PRINTS PR00166 Aromatic amino acid permease signature 306 324 9.3E-36 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VEA_001420 b675625122d9e48d5afb0ab6a7997d7c 385 PRINTS PR00166 Aromatic amino acid permease signature 82 102 9.3E-36 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VEA_002240 9be267a1dfdba0335a5e47ef53af5688 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 4.1E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEA_002240 9be267a1dfdba0335a5e47ef53af5688 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 4.1E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEA_002240 9be267a1dfdba0335a5e47ef53af5688 211 Pfam PF13972 Bacterial transcriptional repressor 57 199 4.2E-44 T 13-10-2018 IPR025722 Bacterial transcriptional repressor TetR VEA_002240 9be267a1dfdba0335a5e47ef53af5688 211 Gene3D G3DSA:1.10.357.10 1 209 1.7E-64 T 13-10-2018 VEA_002240 9be267a1dfdba0335a5e47ef53af5688 211 SUPERFAMILY SSF46689 2 71 1.31E-16 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_002240 9be267a1dfdba0335a5e47ef53af5688 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 7.3E-13 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEA_003769 fd2c62fda8c4212c96df95720e284124 817 Pfam PF02687 FtsX-like permease family 269 368 8.6E-6 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VEA_003769 fd2c62fda8c4212c96df95720e284124 817 Pfam PF02687 FtsX-like permease family 715 809 9.8E-8 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VEA_003769 fd2c62fda8c4212c96df95720e284124 817 Pfam PF12704 MacB-like periplasmic core domain 465 657 3.4E-6 T 13-10-2018 IPR025857 MacB-like periplasmic core domain VEA_004155 f24c1834d8a6937df1995736ce500b1a 228 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 4 210 3.3E-38 T 13-10-2018 VEA_004155 f24c1834d8a6937df1995736ce500b1a 228 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 1 228 25.812 T 13-10-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 VEA_001011 5ab44a60f0d8ab3a120a084701fb0dc0 463 Pfam PF13437 HlyD family secretion protein 316 426 4.0E-18 T 13-10-2018 VEA_001011 5ab44a60f0d8ab3a120a084701fb0dc0 463 ProSitePatterns PS00543 HlyD family secretion proteins signature. 428 450 - T 13-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 VEA_001011 5ab44a60f0d8ab3a120a084701fb0dc0 463 Gene3D G3DSA:1.10.287.470 105 127 2.5E-6 T 13-10-2018 VEA_001011 5ab44a60f0d8ab3a120a084701fb0dc0 463 SUPERFAMILY SSF56954 171 260 5.75E-5 T 13-10-2018 VEA_001011 5ab44a60f0d8ab3a120a084701fb0dc0 463 Gene3D G3DSA:2.40.50.100 69 104 2.5E-6 T 13-10-2018 VEA_001011 5ab44a60f0d8ab3a120a084701fb0dc0 463 SUPERFAMILY SSF111369 64 134 6.54E-6 T 13-10-2018 VEA_001011 5ab44a60f0d8ab3a120a084701fb0dc0 463 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 31 463 4.0E-135 T 13-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 VEA_001011 5ab44a60f0d8ab3a120a084701fb0dc0 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 428 443 3.6E-48 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VEA_001011 5ab44a60f0d8ab3a120a084701fb0dc0 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 443 463 3.6E-48 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VEA_001011 5ab44a60f0d8ab3a120a084701fb0dc0 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 329 350 3.6E-48 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VEA_001011 5ab44a60f0d8ab3a120a084701fb0dc0 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 40 63 3.6E-48 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VEA_001011 5ab44a60f0d8ab3a120a084701fb0dc0 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 386 409 3.6E-48 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VEA_001011 5ab44a60f0d8ab3a120a084701fb0dc0 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 82 102 3.6E-48 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VEA_001011 5ab44a60f0d8ab3a120a084701fb0dc0 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 362 386 3.6E-48 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VEA_001011 5ab44a60f0d8ab3a120a084701fb0dc0 463 Pfam PF13533 Biotin-lipoyl like 75 108 1.8E-6 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VEA_004249 8064dca88d28ac79859e66907f3c9998 363 Gene3D G3DSA:3.40.50.150 178 358 3.1E-52 T 13-10-2018 VEA_004249 8064dca88d28ac79859e66907f3c9998 363 SUPERFAMILY SSF53335 186 302 1.26E-12 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_004249 8064dca88d28ac79859e66907f3c9998 363 Gene3D G3DSA:3.30.2300.20 80 177 3.6E-39 T 13-10-2018 VEA_004249 8064dca88d28ac79859e66907f3c9998 363 Pfam PF01728 FtsJ-like methyltransferase 188 281 2.8E-5 T 13-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 VEA_004249 8064dca88d28ac79859e66907f3c9998 363 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 357 84.011 T 13-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 VEA_004249 8064dca88d28ac79859e66907f3c9998 363 Gene3D G3DSA:3.30.70.2810 1 79 5.7E-33 T 13-10-2018 VEA_004249 8064dca88d28ac79859e66907f3c9998 363 PIRSF PIRSF028774 1 362 7.8E-193 T 13-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 VEA_002231 14de95bdfd34d31499d140ab7dca66c4 340 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 16 335 1.1E-155 T 13-10-2018 IPR022462 Lysine-2,3-aminomutase-like VEA_002231 14de95bdfd34d31499d140ab7dca66c4 340 PIRSF PIRSF004911 3 340 1.6E-117 T 13-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase VEA_002231 14de95bdfd34d31499d140ab7dca66c4 340 Pfam PF13353 4Fe-4S single cluster domain 115 182 5.9E-7 T 13-10-2018 VEA_002231 14de95bdfd34d31499d140ab7dca66c4 340 Pfam PF04055 Radical SAM superfamily 117 280 1.1E-8 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VEA_002231 14de95bdfd34d31499d140ab7dca66c4 340 TIGRFAM TIGR00238 TIGR00238: KamA family protein 11 328 2.0E-128 T 13-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase VEA_002231 14de95bdfd34d31499d140ab7dca66c4 340 SUPERFAMILY SSF102114 102 324 3.01E-26 T 13-10-2018 VEA_002231 14de95bdfd34d31499d140ab7dca66c4 340 Gene3D G3DSA:3.20.20.70 51 334 3.5E-91 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_000654 ad37d7de7696dad8314484930bc5dd44 360 Gene3D G3DSA:1.10.287.470 94 167 1.4E-56 T 13-10-2018 VEA_000654 ad37d7de7696dad8314484930bc5dd44 360 Gene3D G3DSA:2.40.30.170 45 281 1.4E-56 T 13-10-2018 VEA_000654 ad37d7de7696dad8314484930bc5dd44 360 Gene3D G3DSA:2.40.50.100 60 206 1.4E-56 T 13-10-2018 VEA_000654 ad37d7de7696dad8314484930bc5dd44 360 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 36 350 1.0E-54 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VEA_000654 ad37d7de7696dad8314484930bc5dd44 360 SUPERFAMILY SSF111369 50 223 1.15E-19 T 13-10-2018 VEA_000654 ad37d7de7696dad8314484930bc5dd44 360 Gene3D G3DSA:2.40.420.20 38 350 1.4E-56 T 13-10-2018 VEA_000654 ad37d7de7696dad8314484930bc5dd44 360 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 259 3.1E-14 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VEA_003059 74d13365bdba7bed9f8decb27a8a8e48 320 Gene3D G3DSA:3.40.50.1100 36 306 8.1E-24 T 13-10-2018 VEA_003059 74d13365bdba7bed9f8decb27a8a8e48 320 Gene3D G3DSA:3.40.50.1100 55 159 8.1E-24 T 13-10-2018 VEA_003059 74d13365bdba7bed9f8decb27a8a8e48 320 SUPERFAMILY SSF53686 31 317 2.44E-56 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VEA_003059 74d13365bdba7bed9f8decb27a8a8e48 320 PIRSF PIRSF006278 21 318 5.0E-24 T 13-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase VEA_003849 9391b67d2d91ee743c5eff03fcc72e3d 298 Gene3D G3DSA:3.40.190.10 6 219 4.7E-68 T 13-10-2018 VEA_003849 9391b67d2d91ee743c5eff03fcc72e3d 298 SUPERFAMILY SSF53850 5 222 5.07E-66 T 13-10-2018 VEA_003849 9391b67d2d91ee743c5eff03fcc72e3d 298 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 204 297 2.2E-30 T 13-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 VEA_003849 9391b67d2d91ee743c5eff03fcc72e3d 298 Gene3D G3DSA:3.30.70.120 225 298 9.9E-34 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VEA_003849 9391b67d2d91ee743c5eff03fcc72e3d 298 Pfam PF08029 HisG, C-terminal domain 222 295 4.6E-24 T 13-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 VEA_003849 9391b67d2d91ee743c5eff03fcc72e3d 298 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 155 176 - T 13-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 VEA_003849 9391b67d2d91ee743c5eff03fcc72e3d 298 Pfam PF01634 ATP phosphoribosyltransferase 53 218 8.1E-44 T 13-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 VEA_003849 9391b67d2d91ee743c5eff03fcc72e3d 298 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 6 196 7.3E-55 T 13-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 VEA_003849 9391b67d2d91ee743c5eff03fcc72e3d 298 Gene3D G3DSA:3.40.190.10 102 191 4.7E-68 T 13-10-2018 VEA_003849 9391b67d2d91ee743c5eff03fcc72e3d 298 SUPERFAMILY SSF54913 225 297 5.11E-21 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta VEA_003849 9391b67d2d91ee743c5eff03fcc72e3d 298 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 5 298 35.172 T 13-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 VEA_000321 d70fe0e8bf882a6ac4455a46200c8b79 717 Pfam PF12805 FUSC-like inner membrane protein yccS 68 348 1.6E-112 T 13-10-2018 IPR032692 Integral membrane protein YccS, N-terminal VEA_000321 d70fe0e8bf882a6ac4455a46200c8b79 717 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 10 711 2.3E-240 T 13-10-2018 IPR010020 Integral membrane protein, YccS/YhfK VEA_000321 d70fe0e8bf882a6ac4455a46200c8b79 717 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 10 712 0.0 T 13-10-2018 IPR010019 Integral membrane protein, YccS VEA_000321 d70fe0e8bf882a6ac4455a46200c8b79 717 Pfam PF13515 Fusaric acid resistance protein-like 405 523 1.2E-22 T 13-10-2018 VEA_001529 8a499c95a2f08cc0eac5366340ff18f2 199 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 18 191 1.3E-22 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_001529 8a499c95a2f08cc0eac5366340ff18f2 199 SUPERFAMILY SSF161098 2 181 1.44E-36 T 13-10-2018 IPR035906 MetI-like superfamily VEA_001529 8a499c95a2f08cc0eac5366340ff18f2 199 Gene3D G3DSA:1.10.3720.10 1 191 3.4E-32 T 13-10-2018 IPR035906 MetI-like superfamily VEA_004486 b33fe5a6f118488f5de1653fbff02402 412 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 399 38.164 T 13-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 VEA_004486 b33fe5a6f118488f5de1653fbff02402 412 Gene3D G3DSA:3.30.1330.20 221 327 1.0E-34 T 13-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 VEA_004486 b33fe5a6f118488f5de1653fbff02402 412 Pfam PF12327 FtsZ family, C-terminal domain 222 316 2.1E-36 T 13-10-2018 IPR024757 Cell division protein FtsZ, C-terminal VEA_004486 b33fe5a6f118488f5de1653fbff02402 412 SUPERFAMILY SSF52490 13 208 2.88E-69 T 13-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 VEA_004486 b33fe5a6f118488f5de1653fbff02402 412 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 13-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 VEA_004486 b33fe5a6f118488f5de1653fbff02402 412 SUPERFAMILY SSF55307 204 320 6.64E-43 T 13-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 VEA_004486 b33fe5a6f118488f5de1653fbff02402 412 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 13-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 VEA_004486 b33fe5a6f118488f5de1653fbff02402 412 SMART SM00865 207 325 1.9E-56 T 13-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 VEA_004486 b33fe5a6f118488f5de1653fbff02402 412 Gene3D G3DSA:3.40.50.1440 5 220 6.4E-80 T 13-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 VEA_004486 b33fe5a6f118488f5de1653fbff02402 412 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 1.4E-39 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VEA_004486 b33fe5a6f118488f5de1653fbff02402 412 SMART SM00864 13 205 3.8E-112 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VEA_004486 b33fe5a6f118488f5de1653fbff02402 412 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 333 1.5E-136 T 13-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 VEA_004486 b33fe5a6f118488f5de1653fbff02402 412 PRINTS PR00423 Cell division protein FtsZ signature 189 211 6.2E-52 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VEA_004486 b33fe5a6f118488f5de1653fbff02402 412 PRINTS PR00423 Cell division protein FtsZ signature 212 233 6.2E-52 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VEA_004486 b33fe5a6f118488f5de1653fbff02402 412 PRINTS PR00423 Cell division protein FtsZ signature 126 147 6.2E-52 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VEA_004486 b33fe5a6f118488f5de1653fbff02402 412 PRINTS PR00423 Cell division protein FtsZ signature 98 118 6.2E-52 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VEA_002334 172c44b6db02fe4c0a08641ec7d7996e 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 73 9.0E-24 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002334 172c44b6db02fe4c0a08641ec7d7996e 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 73 6.2E-38 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002334 172c44b6db02fe4c0a08641ec7d7996e 75 Pfam PF01084 Ribosomal protein S18 19 68 2.8E-25 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002334 172c44b6db02fe4c0a08641ec7d7996e 75 Gene3D G3DSA:4.10.640.10 20 75 7.8E-29 T 13-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002334 172c44b6db02fe4c0a08641ec7d7996e 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.42 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002334 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.6E-18 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002334 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.6E-18 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002334 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.6E-18 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002334 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.6E-18 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002334 172c44b6db02fe4c0a08641ec7d7996e 75 SUPERFAMILY SSF46911 3 74 2.49E-29 T 13-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002334 172c44b6db02fe4c0a08641ec7d7996e 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 13-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001765 40ae7f21c0dcfba2587e620f348f4840 391 PIRSF PIRSF000390 1 390 2.4E-120 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VEA_001765 40ae7f21c0dcfba2587e620f348f4840 391 SUPERFAMILY SSF53383 8 386 7.26E-105 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_001765 40ae7f21c0dcfba2587e620f348f4840 391 Gene3D G3DSA:3.90.1150.10 257 390 1.8E-16 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEA_001765 40ae7f21c0dcfba2587e620f348f4840 391 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 377 1.5E-99 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VEA_001765 40ae7f21c0dcfba2587e620f348f4840 391 Gene3D G3DSA:3.40.640.10 3 256 1.4E-87 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_003568 2e408115fd6e2114ca903dbfbf5e9d17 658 Gene3D G3DSA:1.10.3470.10 347 658 1.3E-74 T 13-10-2018 IPR037294 ABC transporter, BtuC-like VEA_003568 2e408115fd6e2114ca903dbfbf5e9d17 658 SUPERFAMILY SSF81345 15 323 1.03E-57 T 13-10-2018 IPR037294 ABC transporter, BtuC-like VEA_003568 2e408115fd6e2114ca903dbfbf5e9d17 658 SUPERFAMILY SSF81345 343 657 4.58E-67 T 13-10-2018 IPR037294 ABC transporter, BtuC-like VEA_003568 2e408115fd6e2114ca903dbfbf5e9d17 658 Gene3D G3DSA:1.10.3470.10 1 329 7.0E-72 T 13-10-2018 IPR037294 ABC transporter, BtuC-like VEA_003568 2e408115fd6e2114ca903dbfbf5e9d17 658 Pfam PF01032 FecCD transport family 354 657 8.6E-75 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VEA_003568 2e408115fd6e2114ca903dbfbf5e9d17 658 Pfam PF01032 FecCD transport family 9 321 1.9E-67 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VEA_000111 e4036abee81dd860f9fa9ec7dab6fb72 395 PRINTS PR00799 Aspartate aminotransferase signature 338 356 1.2E-27 T 13-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VEA_000111 e4036abee81dd860f9fa9ec7dab6fb72 395 PRINTS PR00799 Aspartate aminotransferase signature 270 295 1.2E-27 T 13-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VEA_000111 e4036abee81dd860f9fa9ec7dab6fb72 395 PRINTS PR00799 Aspartate aminotransferase signature 203 215 1.2E-27 T 13-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VEA_000111 e4036abee81dd860f9fa9ec7dab6fb72 395 PRINTS PR00799 Aspartate aminotransferase signature 172 191 1.2E-27 T 13-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VEA_000111 e4036abee81dd860f9fa9ec7dab6fb72 395 Gene3D G3DSA:3.40.640.10 45 312 1.6E-136 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_000111 e4036abee81dd860f9fa9ec7dab6fb72 395 Pfam PF00155 Aminotransferase class I and II 27 389 9.0E-64 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VEA_000111 e4036abee81dd860f9fa9ec7dab6fb72 395 SUPERFAMILY SSF53383 1 393 5.33E-99 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_000111 e4036abee81dd860f9fa9ec7dab6fb72 395 Gene3D G3DSA:3.90.1150.10 11 389 1.6E-136 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEA_001408 f261fbd58110e6ac8074dab9f85d2ac9 259 SUPERFAMILY SSF46689 207 256 1.28E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_001408 f261fbd58110e6ac8074dab9f85d2ac9 259 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 238 254 9.3E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEA_001408 f261fbd58110e6ac8074dab9f85d2ac9 259 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 223 238 9.3E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEA_001408 f261fbd58110e6ac8074dab9f85d2ac9 259 Pfam PF12833 Helix-turn-helix domain 178 255 7.0E-17 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_001408 f261fbd58110e6ac8074dab9f85d2ac9 259 SMART SM00342 172 254 1.5E-21 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_001408 f261fbd58110e6ac8074dab9f85d2ac9 259 Gene3D G3DSA:1.10.10.60 151 258 3.3E-23 T 13-10-2018 VEA_003042 2dde109984fcb7b15efe89da0fd2123a 251 SUPERFAMILY SSF53335 15 250 5.63E-38 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_003042 2dde109984fcb7b15efe89da0fd2123a 251 Gene3D G3DSA:2.20.25.570 144 209 2.5E-40 T 13-10-2018 VEA_003042 2dde109984fcb7b15efe89da0fd2123a 251 Gene3D G3DSA:3.40.50.150 39 241 2.5E-40 T 13-10-2018 VEA_003042 2dde109984fcb7b15efe89da0fd2123a 251 Pfam PF13649 Methyltransferase domain 42 136 1.2E-17 T 13-10-2018 VEA_000543 c5aba59cf9177a3cab3825be8a999685 427 PIRSF PIRSF006603 1 426 3.4E-79 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEA_000543 c5aba59cf9177a3cab3825be8a999685 427 TIGRFAM TIGR00797 matE: MATE efflux family protein 4 386 6.2E-46 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEA_000543 c5aba59cf9177a3cab3825be8a999685 427 Pfam PF01554 MatE 223 380 1.3E-16 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEA_000543 c5aba59cf9177a3cab3825be8a999685 427 Pfam PF01554 MatE 4 164 1.4E-20 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEA_003656 2181207d2344dec3d851b94845456ae2 368 Gene3D G3DSA:3.40.630.10 16 362 1.3E-113 T 13-10-2018 VEA_003656 2181207d2344dec3d851b94845456ae2 368 Pfam PF07687 Peptidase dimerisation domain 180 273 5.5E-15 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain VEA_003656 2181207d2344dec3d851b94845456ae2 368 Pfam PF01546 Peptidase family M20/M25/M40 73 366 7.0E-18 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 VEA_003656 2181207d2344dec3d851b94845456ae2 368 Gene3D G3DSA:3.30.70.360 176 287 1.3E-113 T 13-10-2018 VEA_003656 2181207d2344dec3d851b94845456ae2 368 SUPERFAMILY SSF55031 177 289 5.5E-22 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VEA_003656 2181207d2344dec3d851b94845456ae2 368 PIRSF PIRSF001123 97 183 0.0046 T 13-10-2018 IPR008007 Peptidase M42 VEA_003656 2181207d2344dec3d851b94845456ae2 368 PIRSF PIRSF001123 6 101 0.081 T 13-10-2018 IPR008007 Peptidase M42 VEA_003656 2181207d2344dec3d851b94845456ae2 368 PIRSF PIRSF001123 284 368 3.8E-4 T 13-10-2018 IPR008007 Peptidase M42 VEA_003656 2181207d2344dec3d851b94845456ae2 368 SUPERFAMILY SSF53187 7 366 1.05E-58 T 13-10-2018 VEA_003656 2181207d2344dec3d851b94845456ae2 368 TIGRFAM TIGR01883 PepT-like: peptidase T-like protein 8 362 3.2E-156 T 13-10-2018 IPR010162 Peptidase M20B, peptidase T-like VEA_001249 4d147612e3ed41ce9e143e1e4d640aaa 236 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.732 T 13-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VEA_001249 4d147612e3ed41ce9e143e1e4d640aaa 236 Pfam PF01048 Phosphorylase superfamily 17 222 1.0E-33 T 13-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VEA_001249 4d147612e3ed41ce9e143e1e4d640aaa 236 SUPERFAMILY SSF53167 3 234 9.3E-92 T 13-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 VEA_001249 4d147612e3ed41ce9e143e1e4d640aaa 236 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 233 5.7E-113 T 13-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VEA_001249 4d147612e3ed41ce9e143e1e4d640aaa 236 Gene3D G3DSA:3.40.50.1580 1 236 1.1E-75 T 13-10-2018 VEA_001946 94e66a1e2dd0909c8c6539a96f7c4046 141 Pfam PF00582 Universal stress protein family 3 138 2.6E-21 T 13-10-2018 IPR006016 UspA VEA_001946 94e66a1e2dd0909c8c6539a96f7c4046 141 PIRSF PIRSF006276 1 141 4.1E-53 T 13-10-2018 IPR006015 Universal stress protein A VEA_001946 94e66a1e2dd0909c8c6539a96f7c4046 141 Gene3D G3DSA:3.40.50.620 2 141 5.2E-49 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_001946 94e66a1e2dd0909c8c6539a96f7c4046 141 SUPERFAMILY SSF52402 3 139 1.34E-33 T 13-10-2018 VEA_001348 5aeca72f84a7c0a3f16064a930f29227 99 Pfam PF04175 Protein of unknown function (DUF406) 7 95 3.6E-27 T 13-10-2018 IPR005272 Conserved hypothetical protein CHP00743 VEA_001348 5aeca72f84a7c0a3f16064a930f29227 99 Gene3D G3DSA:3.30.70.860 2 99 3.6E-39 T 13-10-2018 IPR035571 UPF0234-like, C-terminal VEA_003333 c244061cd38868ae909a204432d47e15 135 TIGRFAM TIGR02567 YscW: type III secretion system chaperone YscW 9 134 5.1E-32 T 13-10-2018 IPR013400 Type III secretion system chaperone, YscW VEA_003333 c244061cd38868ae909a204432d47e15 135 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 34 131 7.3E-9 T 13-10-2018 IPR039366 YscW/ExsB VEA_003413 21fc86a72ca0ae0075a0e0379559d4eb 220 ProSitePatterns PS01243 Bax inhibitor-1 family signature. 88 118 - T 13-10-2018 IPR006213 Bax inhibitor 1, conserved site GO:0016021|GO:0043066 VEA_003413 21fc86a72ca0ae0075a0e0379559d4eb 220 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 214 1.8E-39 T 13-10-2018 IPR006214 Bax inhibitor 1-related VEA_003098 393cffa003d1cdd3df00a5241dacf3d3 188 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 165 1.3E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_003098 393cffa003d1cdd3df00a5241dacf3d3 188 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 123 137 1.3E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_003098 393cffa003d1cdd3df00a5241dacf3d3 188 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 137 153 1.3E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_003098 393cffa003d1cdd3df00a5241dacf3d3 188 Gene3D G3DSA:3.40.50.12740 1 183 5.4E-50 T 13-10-2018 VEA_003098 393cffa003d1cdd3df00a5241dacf3d3 188 SUPERFAMILY SSF52172 3 106 3.84E-26 T 13-10-2018 IPR011006 CheY-like superfamily VEA_003098 393cffa003d1cdd3df00a5241dacf3d3 188 SMART SM00421 120 177 2.0E-17 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_003098 393cffa003d1cdd3df00a5241dacf3d3 188 ProSitePatterns PS00622 LuxR-type HTH domain signature. 137 164 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_003098 393cffa003d1cdd3df00a5241dacf3d3 188 Pfam PF00196 Bacterial regulatory proteins, luxR family 123 177 1.4E-18 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VEA_003098 393cffa003d1cdd3df00a5241dacf3d3 188 Pfam PF00072 Response regulator receiver domain 2 90 3.1E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_003098 393cffa003d1cdd3df00a5241dacf3d3 188 SUPERFAMILY SSF46894 110 184 1.05E-18 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEA_003098 393cffa003d1cdd3df00a5241dacf3d3 188 SMART SM00448 1 89 3.2E-8 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_000162 eb0784ec45ee6e89428f53ea4ac8e219 251 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 6 251 42.906 T 13-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 VEA_000162 eb0784ec45ee6e89428f53ea4ac8e219 251 Gene3D G3DSA:3.20.20.370 6 251 2.2E-96 T 13-10-2018 VEA_000162 eb0784ec45ee6e89428f53ea4ac8e219 251 SUPERFAMILY SSF88713 7 249 7.26E-91 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VEA_000162 eb0784ec45ee6e89428f53ea4ac8e219 251 Pfam PF03746 LamB/YcsF family 9 246 1.7E-93 T 13-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 VEA_002450 ee18e2990d87114660da3a303e38e747 392 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 378 1.1E-136 T 13-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 VEA_002450 ee18e2990d87114660da3a303e38e747 392 SUPERFAMILY SSF102114 4 386 9.16E-110 T 13-10-2018 VEA_002450 ee18e2990d87114660da3a303e38e747 392 Pfam PF04055 Radical SAM superfamily 11 181 4.7E-17 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VEA_002450 ee18e2990d87114660da3a303e38e747 392 Pfam PF06969 HemN C-terminal domain 314 374 2.6E-8 T 13-10-2018 IPR010723 HemN, C-terminal VEA_002450 ee18e2990d87114660da3a303e38e747 392 Gene3D G3DSA:3.80.30.20 2 307 3.7E-95 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VEA_002450 ee18e2990d87114660da3a303e38e747 392 SMART SM00729 6 227 1.4E-52 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VEA_001080 3f3bf41e07abac4b33fff49e30b91a8e 214 PIRSF PIRSF039033 3 214 1.0E-53 T 13-10-2018 IPR028347 START domain-containing protein VEA_001080 3f3bf41e07abac4b33fff49e30b91a8e 214 Pfam PF01852 START domain 63 200 6.6E-6 T 13-10-2018 IPR002913 START domain GO:0008289 VEA_001080 3f3bf41e07abac4b33fff49e30b91a8e 214 SUPERFAMILY SSF55961 21 205 2.83E-40 T 13-10-2018 VEA_001080 3f3bf41e07abac4b33fff49e30b91a8e 214 Gene3D G3DSA:3.30.530.20 25 211 2.0E-51 T 13-10-2018 IPR023393 START-like domain superfamily VEA_002235 2b290d07735f9a7654eeb3bb5e6b608a 127 Gene3D G3DSA:1.20.1300.10 1 127 7.5E-48 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEA_002235 2b290d07735f9a7654eeb3bb5e6b608a 127 Pfam PF02300 Fumarate reductase subunit C 2 127 7.8E-50 T 13-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 VEA_002235 2b290d07735f9a7654eeb3bb5e6b608a 127 PIRSF PIRSF000180 1 127 1.4E-57 T 13-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 VEA_002235 2b290d07735f9a7654eeb3bb5e6b608a 127 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 7 127 7.0E-50 T 13-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 VEA_002235 2b290d07735f9a7654eeb3bb5e6b608a 127 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 1 127 27.274 T 13-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 VEA_002235 2b290d07735f9a7654eeb3bb5e6b608a 127 SUPERFAMILY SSF81343 1 127 3.49E-53 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEA_001112 479a8b62638d244f46e8f2834f0045f8 374 Gene3D G3DSA:3.40.630.10 11 361 9.4E-103 T 13-10-2018 VEA_001112 479a8b62638d244f46e8f2834f0045f8 374 Gene3D G3DSA:3.30.70.360 177 286 9.4E-103 T 13-10-2018 VEA_001112 479a8b62638d244f46e8f2834f0045f8 374 PIRSF PIRSF037238 1 373 1.2E-147 T 13-10-2018 IPR017150 Peptidase M20, glutamate carboxypeptidase VEA_001112 479a8b62638d244f46e8f2834f0045f8 374 SUPERFAMILY SSF55031 177 282 8.77E-25 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VEA_001112 479a8b62638d244f46e8f2834f0045f8 374 SUPERFAMILY SSF53187 2 373 1.18E-42 T 13-10-2018 VEA_001112 479a8b62638d244f46e8f2834f0045f8 374 Pfam PF07687 Peptidase dimerisation domain 175 274 1.4E-22 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain VEA_001112 479a8b62638d244f46e8f2834f0045f8 374 Pfam PF01546 Peptidase family M20/M25/M40 73 370 4.1E-24 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 VEA_003120 a63c8f2570b8c051ca10ed0c034de1b4 136 Pfam PF03918 Cytochrome C biogenesis protein 27 135 2.6E-41 T 13-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family VEA_003120 a63c8f2570b8c051ca10ed0c034de1b4 136 TIGRFAM TIGR03147 cyt_nit_nrfF: cytochrome c nitrite reductase, accessory protein NrfF 10 136 3.6E-48 T 13-10-2018 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF VEA_003120 a63c8f2570b8c051ca10ed0c034de1b4 136 Gene3D G3DSA:1.10.8.640 28 113 1.2E-32 T 13-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily VEA_003391 97b82ffdcf381917690a094e424283c6 398 Gene3D G3DSA:3.10.310.10 16 390 9.1E-149 T 13-10-2018 VEA_003391 97b82ffdcf381917690a094e424283c6 398 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 9 397 6.2E-235 T 13-10-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 VEA_003391 97b82ffdcf381917690a094e424283c6 398 Gene3D G3DSA:3.10.310.10 186 376 9.1E-149 T 13-10-2018 VEA_003391 97b82ffdcf381917690a094e424283c6 398 SUPERFAMILY SSF54506 191 396 1.27E-75 T 13-10-2018 VEA_003391 97b82ffdcf381917690a094e424283c6 398 SUPERFAMILY SSF54506 8 186 3.92E-71 T 13-10-2018 VEA_003391 97b82ffdcf381917690a094e424283c6 398 Pfam PF04303 PrpF protein 11 393 3.2E-175 T 13-10-2018 IPR007400 PrpF protein VEA_002275 77d51fc577511c71b3fc3cad2234a61c 403 Gene3D G3DSA:3.90.1150.10 25 392 2.7E-151 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEA_002275 77d51fc577511c71b3fc3cad2234a61c 403 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 16 399 2.6E-150 T 13-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 VEA_002275 77d51fc577511c71b3fc3cad2234a61c 403 Gene3D G3DSA:3.40.640.10 59 304 2.7E-151 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_002275 77d51fc577511c71b3fc3cad2234a61c 403 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEA_002275 77d51fc577511c71b3fc3cad2234a61c 403 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 403 1.7E-207 T 13-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 VEA_002275 77d51fc577511c71b3fc3cad2234a61c 403 Pfam PF00202 Aminotransferase class-III 22 399 9.1E-128 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEA_002275 77d51fc577511c71b3fc3cad2234a61c 403 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 15 402 70.368 T 13-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 VEA_002275 77d51fc577511c71b3fc3cad2234a61c 403 PIRSF PIRSF000521 28 155 5.0E-8 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEA_002275 77d51fc577511c71b3fc3cad2234a61c 403 PIRSF PIRSF000521 172 402 2.5E-38 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEA_002275 77d51fc577511c71b3fc3cad2234a61c 403 SUPERFAMILY SSF53383 16 399 3.09E-130 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_001413 75428cf96d3172d7a8c7a27a7effdcab 420 Gene3D G3DSA:3.40.50.2300 312 414 1.8E-29 T 13-10-2018 VEA_001413 75428cf96d3172d7a8c7a27a7effdcab 420 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 326 407 1.6E-10 T 13-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VEA_001413 75428cf96d3172d7a8c7a27a7effdcab 420 SUPERFAMILY SSF52794 326 412 1.83E-19 T 13-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VEA_001413 75428cf96d3172d7a8c7a27a7effdcab 420 Pfam PF02378 Phosphotransferase system, EIIC 2 222 5.5E-15 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VEA_001955 299b14c541311b07393f596ceb15d431 301 Gene3D G3DSA:3.40.190.10 173 275 6.3E-33 T 13-10-2018 VEA_001955 299b14c541311b07393f596ceb15d431 301 SUPERFAMILY SSF53850 99 287 4.34E-19 T 13-10-2018 VEA_001955 299b14c541311b07393f596ceb15d431 301 Pfam PF03466 LysR substrate binding domain 98 299 1.6E-19 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_001955 299b14c541311b07393f596ceb15d431 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 70 2.1E-20 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_001955 299b14c541311b07393f596ceb15d431 301 Gene3D G3DSA:3.40.190.10 101 294 6.3E-33 T 13-10-2018 VEA_001955 299b14c541311b07393f596ceb15d431 301 Gene3D G3DSA:1.10.10.10 5 94 3.7E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001955 299b14c541311b07393f596ceb15d431 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 5.5E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_001955 299b14c541311b07393f596ceb15d431 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 5.5E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_001955 299b14c541311b07393f596ceb15d431 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 5.5E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_001955 299b14c541311b07393f596ceb15d431 301 SUPERFAMILY SSF46785 10 92 1.28E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_002514 d9add73fe1869a1e93c5f428f009a35f 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 5 206 1.4E-82 T 13-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VEA_002514 d9add73fe1869a1e93c5f428f009a35f 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 13-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VEA_002514 d9add73fe1869a1e93c5f428f009a35f 208 SUPERFAMILY SSF53335 14 204 3.34E-46 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_002514 d9add73fe1869a1e93c5f428f009a35f 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 38.711 T 13-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VEA_002514 d9add73fe1869a1e93c5f428f009a35f 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 7 204 3.1E-71 T 13-10-2018 VEA_002514 d9add73fe1869a1e93c5f428f009a35f 208 Gene3D G3DSA:3.40.50.150 2 206 4.6E-76 T 13-10-2018 VEA_000045 c9b72ffb5b24da6701caead78032fd28 106 SUPERFAMILY SSF46626 32 103 4.44E-19 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEA_000045 c9b72ffb5b24da6701caead78032fd28 106 Pfam PF00034 Cytochrome c 33 98 1.1E-6 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_000045 c9b72ffb5b24da6701caead78032fd28 106 Gene3D G3DSA:1.10.760.10 21 105 4.7E-22 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEA_002526 4f0db60ebb5b47af1ab2e764bd036288 376 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 370 4.8E-169 T 13-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 VEA_002526 4f0db60ebb5b47af1ab2e764bd036288 376 PIRSF PIRSF015658 1 376 8.8E-178 T 13-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 VEA_002526 4f0db60ebb5b47af1ab2e764bd036288 376 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 374 3.3E-158 T 13-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 VEA_001309 959fc66a9e56360a0557dc5d7b7f198b 623 Pfam PF02378 Phosphotransferase system, EIIC 189 446 2.3E-10 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VEA_001309 959fc66a9e56360a0557dc5d7b7f198b 623 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 528 618 2.3E-16 T 13-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VEA_001309 959fc66a9e56360a0557dc5d7b7f198b 623 Gene3D G3DSA:3.40.50.2300 523 623 9.9E-34 T 13-10-2018 VEA_001309 959fc66a9e56360a0557dc5d7b7f198b 623 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 528 610 1.1E-27 T 13-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 VEA_001309 959fc66a9e56360a0557dc5d7b7f198b 623 SUPERFAMILY SSF52794 526 618 9.94E-29 T 13-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VEA_001309 959fc66a9e56360a0557dc5d7b7f198b 623 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 7 133 8.5E-39 T 13-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 VEA_001309 959fc66a9e56360a0557dc5d7b7f198b 623 SUPERFAMILY SSF55804 1 148 4.06E-40 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VEA_001309 959fc66a9e56360a0557dc5d7b7f198b 623 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 176 497 3.5E-77 T 13-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 VEA_001309 959fc66a9e56360a0557dc5d7b7f198b 623 Gene3D G3DSA:3.40.930.10 1 148 1.7E-43 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VEA_001309 959fc66a9e56360a0557dc5d7b7f198b 623 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 147 6.3E-36 T 13-10-2018 IPR002178 PTS EIIA type-2 domain VEA_001321 a9ee4e79f1dbad0cb02831c842028915 350 Gene3D G3DSA:3.40.50.2000 171 328 6.5E-38 T 13-10-2018 VEA_001321 a9ee4e79f1dbad0cb02831c842028915 350 Pfam PF00534 Glycosyl transferases group 1 171 323 3.4E-32 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 VEA_001321 a9ee4e79f1dbad0cb02831c842028915 350 Pfam PF13439 Glycosyltransferase Family 4 68 161 1.8E-11 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 VEA_001321 a9ee4e79f1dbad0cb02831c842028915 350 Gene3D G3DSA:3.40.50.2000 4 170 3.1E-14 T 13-10-2018 VEA_001321 a9ee4e79f1dbad0cb02831c842028915 350 SUPERFAMILY SSF53756 1 347 6.28E-68 T 13-10-2018 VEA_003970 68e7af2c84f7623ecb8248ef76b1b139 225 SUPERFAMILY SSF161098 11 203 8.37E-41 T 13-10-2018 IPR035906 MetI-like superfamily VEA_003970 68e7af2c84f7623ecb8248ef76b1b139 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 112 7.1E-22 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VEA_003970 68e7af2c84f7623ecb8248ef76b1b139 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 50 217 1.2E-19 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_003970 68e7af2c84f7623ecb8248ef76b1b139 225 Gene3D G3DSA:1.10.3720.10 1 218 2.1E-49 T 13-10-2018 IPR035906 MetI-like superfamily VEA_001908 eb719185b9034e3187becb324b99e204 467 Pfam PF00072 Response regulator receiver domain 6 115 1.6E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_001908 eb719185b9034e3187becb324b99e204 467 Gene3D G3DSA:3.40.50.300 128 312 5.0E-67 T 13-10-2018 VEA_001908 eb719185b9034e3187becb324b99e204 467 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VEA_001908 eb719185b9034e3187becb324b99e204 467 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VEA_001908 eb719185b9034e3187becb324b99e204 467 Pfam PF00158 Sigma-54 interaction domain 142 308 6.7E-71 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VEA_001908 eb719185b9034e3187becb324b99e204 467 Gene3D G3DSA:1.10.8.60 313 380 1.1E-17 T 13-10-2018 VEA_001908 eb719185b9034e3187becb324b99e204 467 SUPERFAMILY SSF52540 141 385 8.53E-74 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001908 eb719185b9034e3187becb324b99e204 467 SMART SM00448 4 115 3.1E-33 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_001908 eb719185b9034e3187becb324b99e204 467 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 466 1.8E-237 T 13-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 VEA_001908 eb719185b9034e3187becb324b99e204 467 Gene3D G3DSA:1.10.10.60 381 467 1.5E-26 T 13-10-2018 VEA_001908 eb719185b9034e3187becb324b99e204 467 SUPERFAMILY SSF52172 2 187 2.13E-43 T 13-10-2018 IPR011006 CheY-like superfamily VEA_001908 eb719185b9034e3187becb324b99e204 467 SMART SM00382 162 316 1.0E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_001908 eb719185b9034e3187becb324b99e204 467 SUPERFAMILY SSF46689 382 466 1.75E-19 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_001908 eb719185b9034e3187becb324b99e204 467 Pfam PF02954 Bacterial regulatory protein, Fis family 426 466 2.7E-16 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEA_001908 eb719185b9034e3187becb324b99e204 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 1.3E-7 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEA_001908 eb719185b9034e3187becb324b99e204 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 467 1.3E-7 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEA_001908 eb719185b9034e3187becb324b99e204 467 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VEA_001908 eb719185b9034e3187becb324b99e204 467 Gene3D G3DSA:3.40.50.2300 1 124 2.7E-40 T 13-10-2018 VEA_000597 a3a7972a849713c850577c0f9baf806f 484 Gene3D G3DSA:2.115.10.20 38 350 2.6E-114 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily VEA_000597 a3a7972a849713c850577c0f9baf806f 484 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 41 54 - T 13-10-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 VEA_000597 a3a7972a849713c850577c0f9baf806f 484 SUPERFAMILY SSF49899 343 458 1.03E-18 T 13-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily VEA_000597 a3a7972a849713c850577c0f9baf806f 484 SUPERFAMILY SSF75005 33 341 1.38E-99 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily VEA_000597 a3a7972a849713c850577c0f9baf806f 484 SMART SM00640 41 444 1.8E-139 T 13-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 VEA_000597 a3a7972a849713c850577c0f9baf806f 484 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 365 455 9.4E-12 T 13-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal VEA_000597 a3a7972a849713c850577c0f9baf806f 484 Gene3D G3DSA:2.60.120.560 351 456 2.6E-114 T 13-10-2018 VEA_000597 a3a7972a849713c850577c0f9baf806f 484 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 25 455 6.6E-187 T 13-10-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 VEA_000597 a3a7972a849713c850577c0f9baf806f 484 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 41 341 1.1E-95 T 13-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal VEA_000171 980ef491cd966d4d4b907d365bf6c322 551 SUPERFAMILY SSF52540 227 410 1.53E-6 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000171 980ef491cd966d4d4b907d365bf6c322 551 Pfam PF09818 Predicted ATPase of the ABC class 1 435 2.1E-187 T 13-10-2018 IPR019195 ABC transporter, ATPase, putative VEA_002425 fba12613a0dc4d11ffb895a4e93d15f5 130 Pfam PF09834 Predicted membrane protein (DUF2061) 1 52 3.1E-21 T 13-10-2018 IPR018638 Domain of unknown function DUF2061, membrane VEA_002425 fba12613a0dc4d11ffb895a4e93d15f5 130 Pfam PF09834 Predicted membrane protein (DUF2061) 66 115 2.3E-20 T 13-10-2018 IPR018638 Domain of unknown function DUF2061, membrane VEA_000763 c67fb9df6c118605237bf672eb8a1124 233 Pfam PF07702 UTRA domain 86 224 4.5E-35 T 13-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VEA_000763 c67fb9df6c118605237bf672eb8a1124 233 Gene3D G3DSA:3.40.1410.10 70 228 6.4E-35 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VEA_000763 c67fb9df6c118605237bf672eb8a1124 233 Gene3D G3DSA:1.10.10.10 2 69 5.5E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000763 c67fb9df6c118605237bf672eb8a1124 233 SUPERFAMILY SSF64288 53 229 1.88E-40 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VEA_000763 c67fb9df6c118605237bf672eb8a1124 233 TIGRFAM TIGR03337 phnR: phosphonate utilization transcriptional regulator PhnR 2 230 9.4E-117 T 13-10-2018 IPR017722 Phosphonate utilization transcriptional regulator PhnR VEA_000763 c67fb9df6c118605237bf672eb8a1124 233 SUPERFAMILY SSF46785 3 73 9.79E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000763 c67fb9df6c118605237bf672eb8a1124 233 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 65 4.6E-18 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_000763 c67fb9df6c118605237bf672eb8a1124 233 SMART SM00345 6 65 4.1E-16 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_000763 c67fb9df6c118605237bf672eb8a1124 233 SMART SM00866 86 225 1.6E-30 T 13-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VEA_000763 c67fb9df6c118605237bf672eb8a1124 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 25 39 3.0E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_000763 c67fb9df6c118605237bf672eb8a1124 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 55 3.0E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_000759 b85c126c29d3a6f66cc3985649ccccc3 119 Pfam PF11777 Protein of unknown function (DUF3316) 9 112 2.6E-12 T 13-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 VEA_000759 b85c126c29d3a6f66cc3985649ccccc3 119 PIRSF PIRSF028299 2 118 2.0E-21 T 13-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 VEA_004479 bb1c43c57212e364ce065c46ad709d88 379 SUPERFAMILY SSF52317 153 377 2.96E-63 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VEA_004479 bb1c43c57212e364ce065c46ad709d88 379 Gene3D G3DSA:3.40.50.880 152 378 1.6E-76 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VEA_004479 bb1c43c57212e364ce065c46ad709d88 379 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 1.5E-52 T 13-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEA_004479 bb1c43c57212e364ce065c46ad709d88 379 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.2E-5 T 13-10-2018 VEA_004479 bb1c43c57212e364ce065c46ad709d88 379 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.2E-5 T 13-10-2018 VEA_004479 bb1c43c57212e364ce065c46ad709d88 379 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.2E-5 T 13-10-2018 VEA_004479 bb1c43c57212e364ce065c46ad709d88 379 SUPERFAMILY SSF52021 5 142 2.35E-57 T 13-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEA_004479 bb1c43c57212e364ce065c46ad709d88 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 3.9E-11 T 13-10-2018 VEA_004479 bb1c43c57212e364ce065c46ad709d88 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 3.9E-11 T 13-10-2018 VEA_004479 bb1c43c57212e364ce065c46ad709d88 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 3.9E-11 T 13-10-2018 VEA_004479 bb1c43c57212e364ce065c46ad709d88 379 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 376 7.8E-150 T 13-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEA_004479 bb1c43c57212e364ce065c46ad709d88 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 1.4E-39 T 13-10-2018 VEA_004479 bb1c43c57212e364ce065c46ad709d88 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 1.4E-39 T 13-10-2018 VEA_004479 bb1c43c57212e364ce065c46ad709d88 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 1.4E-39 T 13-10-2018 VEA_004479 bb1c43c57212e364ce065c46ad709d88 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 1.4E-39 T 13-10-2018 VEA_004479 bb1c43c57212e364ce065c46ad709d88 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 1.4E-39 T 13-10-2018 VEA_004479 bb1c43c57212e364ce065c46ad709d88 379 Gene3D G3DSA:3.50.30.20 3 151 1.4E-61 T 13-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEA_004479 bb1c43c57212e364ce065c46ad709d88 379 Pfam PF00117 Glutamine amidotransferase class-I 197 372 1.9E-47 T 13-10-2018 IPR017926 Glutamine amidotransferase VEA_004479 bb1c43c57212e364ce065c46ad709d88 379 SMART SM01097 3 133 8.2E-92 T 13-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEA_004479 bb1c43c57212e364ce065c46ad709d88 379 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 48.596 T 13-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VEA_004113 c93c5d1efeff1d9241e96dd220896354 236 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 8 228 1.3E-85 T 13-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEA_004113 c93c5d1efeff1d9241e96dd220896354 236 Pfam PF13534 4Fe-4S dicluster domain 146 219 1.5E-10 T 13-10-2018 VEA_004113 c93c5d1efeff1d9241e96dd220896354 236 Gene3D G3DSA:1.10.1060.10 105 236 9.7E-56 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VEA_004113 c93c5d1efeff1d9241e96dd220896354 236 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VEA_004113 c93c5d1efeff1d9241e96dd220896354 236 SUPERFAMILY SSF46548 105 233 4.01E-40 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VEA_004113 c93c5d1efeff1d9241e96dd220896354 236 SUPERFAMILY SSF54292 1 104 3.18E-29 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VEA_004113 c93c5d1efeff1d9241e96dd220896354 236 Gene3D G3DSA:3.10.20.30 1 104 5.0E-33 T 13-10-2018 IPR012675 Beta-grasp domain superfamily VEA_004113 c93c5d1efeff1d9241e96dd220896354 236 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 109 9.4E-30 T 13-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEA_002184 15da810e5b131bc1a9a004dcb608990e 429 Gene3D G3DSA:3.90.600.10 330 429 4.0E-35 T 13-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VEA_002184 15da810e5b131bc1a9a004dcb608990e 429 SUPERFAMILY SSF56059 104 322 2.83E-68 T 13-10-2018 VEA_002184 15da810e5b131bc1a9a004dcb608990e 429 Gene3D G3DSA:3.40.50.20 2 95 1.1E-37 T 13-10-2018 VEA_002184 15da810e5b131bc1a9a004dcb608990e 429 SUPERFAMILY SSF51246 329 424 1.52E-33 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 VEA_002184 15da810e5b131bc1a9a004dcb608990e 429 SUPERFAMILY SSF52440 1 103 7.91E-37 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VEA_002184 15da810e5b131bc1a9a004dcb608990e 429 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 421 2.3E-29 T 13-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VEA_002184 15da810e5b131bc1a9a004dcb608990e 429 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 3.7E-187 T 13-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VEA_002184 15da810e5b131bc1a9a004dcb608990e 429 Gene3D G3DSA:3.30.1490.20 121 190 2.9E-29 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VEA_002184 15da810e5b131bc1a9a004dcb608990e 429 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 13-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VEA_002184 15da810e5b131bc1a9a004dcb608990e 429 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 3.9E-35 T 13-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VEA_002184 15da810e5b131bc1a9a004dcb608990e 429 SMART SM01209 103 296 1.5E-142 T 13-10-2018 VEA_002184 15da810e5b131bc1a9a004dcb608990e 429 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 44.378 T 13-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VEA_002184 15da810e5b131bc1a9a004dcb608990e 429 SMART SM01210 330 423 6.6E-56 T 13-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VEA_002184 15da810e5b131bc1a9a004dcb608990e 429 Gene3D G3DSA:3.30.470.20 191 329 1.9E-62 T 13-10-2018 VEA_002184 15da810e5b131bc1a9a004dcb608990e 429 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 9.4E-83 T 13-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VEA_003759 1f0198c153a98bb8091946bc3d3c6b91 548 Gene3D G3DSA:3.90.1150.170 51 524 6.1E-115 T 13-10-2018 VEA_003759 1f0198c153a98bb8091946bc3d3c6b91 548 Gene3D G3DSA:3.40.640.10 122 387 6.1E-115 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_003759 1f0198c153a98bb8091946bc3d3c6b91 548 SUPERFAMILY SSF53383 29 530 2.72E-118 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_003759 1f0198c153a98bb8091946bc3d3c6b91 548 TIGRFAM TIGR03799 NOD_PanD_pyr: putative pyridoxal-dependent aspartate 1-decarboxylase 6 527 4.8E-299 T 13-10-2018 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 VEA_003759 1f0198c153a98bb8091946bc3d3c6b91 548 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 64 442 2.0E-57 T 13-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 VEA_000628 e854af2fabbb6eeb651e2040607028df 333 Pfam PF12833 Helix-turn-helix domain 251 327 9.6E-17 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_000628 e854af2fabbb6eeb651e2040607028df 333 Gene3D G3DSA:1.10.10.60 223 332 1.5E-21 T 13-10-2018 VEA_000628 e854af2fabbb6eeb651e2040607028df 333 SMART SM00342 245 327 1.2E-21 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_000628 e854af2fabbb6eeb651e2040607028df 333 SUPERFAMILY SSF46689 280 328 3.0E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_000628 e854af2fabbb6eeb651e2040607028df 333 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 296 311 1.2E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEA_000628 e854af2fabbb6eeb651e2040607028df 333 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 311 327 1.2E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEA_000628 e854af2fabbb6eeb651e2040607028df 333 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 20 201 4.5E-22 T 13-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal VEA_002104 66adc7132d04a4ad8e7833412f97698d 403 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 63 391 4.2E-108 T 13-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX VEA_001038 27d373b3df87c35d1739f7a48c7a14fe 161 Gene3D G3DSA:1.10.1740.10 1 78 4.3E-16 T 13-10-2018 VEA_001038 27d373b3df87c35d1739f7a48c7a14fe 161 Pfam PF04542 Sigma-70 region 2 14 75 3.9E-13 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VEA_001038 27d373b3df87c35d1739f7a48c7a14fe 161 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 32 63 - T 13-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VEA_001038 27d373b3df87c35d1739f7a48c7a14fe 161 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 8 154 2.7E-16 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VEA_001038 27d373b3df87c35d1739f7a48c7a14fe 161 SUPERFAMILY SSF88659 99 155 1.68E-11 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VEA_001038 27d373b3df87c35d1739f7a48c7a14fe 161 SUPERFAMILY SSF88946 6 88 7.85E-17 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VEA_001038 27d373b3df87c35d1739f7a48c7a14fe 161 Pfam PF08281 Sigma-70, region 4 103 153 2.1E-9 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VEA_001038 27d373b3df87c35d1739f7a48c7a14fe 161 Gene3D G3DSA:1.10.10.10 95 159 5.5E-13 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000780 f00acafcf9b937ba2fc9c0f410e8fc53 183 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 182 3.6E-80 T 13-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ VEA_000780 f00acafcf9b937ba2fc9c0f410e8fc53 183 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 24 182 2.2E-75 T 13-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ VEA_003783 89de79b50e0200089a864f8302771536 141 Gene3D G3DSA:3.10.450.40 76 129 5.1E-6 T 13-10-2018 VEA_000776 d5e895e3b90cc1d4c345a176116fbc6c 418 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 147 405 5.7E-18 T 13-10-2018 IPR001087 GDSL lipase/esterase GO:0016788 VEA_000776 d5e895e3b90cc1d4c345a176116fbc6c 418 SUPERFAMILY SSF52266 146 408 2.0E-22 T 13-10-2018 VEA_000776 d5e895e3b90cc1d4c345a176116fbc6c 418 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 147 158 - T 13-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 VEA_000776 d5e895e3b90cc1d4c345a176116fbc6c 418 Gene3D G3DSA:3.40.50.1110 133 412 6.9E-40 T 13-10-2018 IPR036514 SGNH hydrolase superfamily VEA_001247 8f4f29a30d13b4a7b31a6df6b1313f23 494 Gene3D G3DSA:1.25.40.10 3 170 3.1E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_001247 8f4f29a30d13b4a7b31a6df6b1313f23 494 SUPERFAMILY SSF48452 64 315 1.16E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_001247 8f4f29a30d13b4a7b31a6df6b1313f23 494 Gene3D G3DSA:1.25.40.10 171 317 2.8E-11 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_001247 8f4f29a30d13b4a7b31a6df6b1313f23 494 SMART SM00028 87 120 360.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_001247 8f4f29a30d13b4a7b31a6df6b1313f23 494 SMART SM00028 127 160 70.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_001247 8f4f29a30d13b4a7b31a6df6b1313f23 494 SMART SM00028 207 240 3.1 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_001883 0cffb02f67458788e04a085cf953ac48 163 SUPERFAMILY SSF103054 85 162 3.27E-25 T 13-10-2018 IPR023229 Type II secretion system protein M, periplasmic domain superfamily VEA_001883 0cffb02f67458788e04a085cf953ac48 163 Pfam PF04612 Type II secretion system (T2SS), protein M 6 162 1.0E-54 T 13-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 VEA_001883 0cffb02f67458788e04a085cf953ac48 163 PIRSF PIRSF006291 2 162 1.9E-40 T 13-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 VEA_001883 0cffb02f67458788e04a085cf953ac48 163 Gene3D G3DSA:3.30.1360.100 85 163 3.7E-31 T 13-10-2018 VEA_003831 e12758b3ab85e3846cc8314c6ba53f7e 77 Pfam PF06146 Phosphate-starvation-inducible E 8 68 1.7E-10 T 13-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like VEA_003831 e12758b3ab85e3846cc8314c6ba53f7e 77 TIGRFAM TIGR02647 DNA: TIGR02647 family protein 1 77 4.5E-42 T 13-10-2018 IPR013468 Conserved hypothetical protein CHP02647 VEA_003943 9269d9b41dab9b10d375dec6d34b2f00 228 Pfam PF09335 SNARE associated Golgi protein 65 181 1.9E-22 T 13-10-2018 IPR032816 SNARE associated Golgi protein VEA_003590 23563ec1ad66794b809f965d03c42746 185 Pfam PF12570 Protein of unknown function (DUF3750) 50 182 1.8E-49 T 13-10-2018 IPR022224 Protein of unknown function DUF3750 VEA_001833 8a21c4bd98d9d529e6012ae242a8854b 427 Gene3D G3DSA:3.40.50.150 2 210 9.3E-57 T 13-10-2018 VEA_001833 8a21c4bd98d9d529e6012ae242a8854b 427 Gene3D G3DSA:3.90.120.10 211 287 1.0E-5 T 13-10-2018 VEA_001833 8a21c4bd98d9d529e6012ae242a8854b 427 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 112 126 2.0E-12 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 VEA_001833 8a21c4bd98d9d529e6012ae242a8854b 427 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 158 171 2.0E-12 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 VEA_001833 8a21c4bd98d9d529e6012ae242a8854b 427 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 9 25 2.0E-12 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 VEA_001833 8a21c4bd98d9d529e6012ae242a8854b 427 Pfam PF00145 C-5 cytosine-specific DNA methylase 9 177 3.2E-46 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 VEA_001833 8a21c4bd98d9d529e6012ae242a8854b 427 Pfam PF00145 C-5 cytosine-specific DNA methylase 233 295 8.9E-10 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 VEA_001833 8a21c4bd98d9d529e6012ae242a8854b 427 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 12 177 1.8E-47 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 VEA_001833 8a21c4bd98d9d529e6012ae242a8854b 427 SUPERFAMILY SSF53335 8 296 3.93E-74 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_002663 383acd89b01375a786a1e103a084eac4 354 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 20 353 4.1E-151 T 13-10-2018 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 VEA_002663 383acd89b01375a786a1e103a084eac4 354 Pfam PF01263 Aldose 1-epimerase 25 351 5.0E-94 T 13-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 VEA_002663 383acd89b01375a786a1e103a084eac4 354 PIRSF PIRSF005096 6 354 1.4E-118 T 13-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 VEA_002663 383acd89b01375a786a1e103a084eac4 354 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 178 187 - T 13-10-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 VEA_002663 383acd89b01375a786a1e103a084eac4 354 Gene3D G3DSA:2.70.98.10 14 353 2.3E-120 T 13-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 VEA_002663 383acd89b01375a786a1e103a084eac4 354 SUPERFAMILY SSF74650 14 352 4.33E-112 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VEA_002318 bd3b7721cb5f45dac87a076a9149fb0d 490 Gene3D G3DSA:3.50.50.60 147 275 3.1E-95 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_002318 bd3b7721cb5f45dac87a076a9149fb0d 490 SUPERFAMILY SSF51905 1 373 1.15E-42 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_002318 bd3b7721cb5f45dac87a076a9149fb0d 490 PIRSF PIRSF000350 1 473 1.4E-62 T 13-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 VEA_002318 bd3b7721cb5f45dac87a076a9149fb0d 490 Gene3D G3DSA:3.30.390.30 353 476 1.5E-42 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VEA_002318 bd3b7721cb5f45dac87a076a9149fb0d 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 269 283 9.0E-41 T 13-10-2018 VEA_002318 bd3b7721cb5f45dac87a076a9149fb0d 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 350 371 9.0E-41 T 13-10-2018 VEA_002318 bd3b7721cb5f45dac87a076a9149fb0d 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 440 460 9.0E-41 T 13-10-2018 VEA_002318 bd3b7721cb5f45dac87a076a9149fb0d 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 174 199 9.0E-41 T 13-10-2018 VEA_002318 bd3b7721cb5f45dac87a076a9149fb0d 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 313 320 9.0E-41 T 13-10-2018 VEA_002318 bd3b7721cb5f45dac87a076a9149fb0d 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 9.0E-41 T 13-10-2018 VEA_002318 bd3b7721cb5f45dac87a076a9149fb0d 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 9.0E-41 T 13-10-2018 VEA_002318 bd3b7721cb5f45dac87a076a9149fb0d 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 418 433 9.0E-41 T 13-10-2018 VEA_002318 bd3b7721cb5f45dac87a076a9149fb0d 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 138 147 9.0E-41 T 13-10-2018 VEA_002318 bd3b7721cb5f45dac87a076a9149fb0d 490 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 333 4.2E-42 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VEA_002318 bd3b7721cb5f45dac87a076a9149fb0d 490 Gene3D G3DSA:1.10.287.990 37 107 3.1E-95 T 13-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VEA_002318 bd3b7721cb5f45dac87a076a9149fb0d 490 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 174 192 1.9E-19 T 13-10-2018 VEA_002318 bd3b7721cb5f45dac87a076a9149fb0d 490 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 135 153 1.9E-19 T 13-10-2018 VEA_002318 bd3b7721cb5f45dac87a076a9149fb0d 490 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.9E-19 T 13-10-2018 VEA_002318 bd3b7721cb5f45dac87a076a9149fb0d 490 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 268 284 1.9E-19 T 13-10-2018 VEA_002318 bd3b7721cb5f45dac87a076a9149fb0d 490 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 298 320 1.9E-19 T 13-10-2018 VEA_002318 bd3b7721cb5f45dac87a076a9149fb0d 490 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 357 465 5.7E-17 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VEA_002318 bd3b7721cb5f45dac87a076a9149fb0d 490 SUPERFAMILY SSF55424 355 474 9.45E-25 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VEA_002318 bd3b7721cb5f45dac87a076a9149fb0d 490 Gene3D G3DSA:3.50.50.60 7 336 3.1E-95 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_004190 94eaddd0e2f36f68d19a497d62f1a0df 230 Gene3D G3DSA:2.40.160.40 38 230 7.4E-13 T 13-10-2018 VEA_004190 94eaddd0e2f36f68d19a497d62f1a0df 230 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 83 180 8.2E-6 T 13-10-2018 IPR009331 Oligogalacturonate-specific porin VEA_002397 eaca2dd5ff79f27f7f99bf55bfa8e5d2 447 SUPERFAMILY SSF111283 12 447 1.57E-128 T 13-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 VEA_002397 eaca2dd5ff79f27f7f99bf55bfa8e5d2 447 Pfam PF01523 Putative modulator of DNA gyrase 32 324 1.4E-60 T 13-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 VEA_002397 eaca2dd5ff79f27f7f99bf55bfa8e5d2 447 Gene3D G3DSA:3.30.2290.10 7 232 2.2E-82 T 13-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal VEA_000029 2a53cda64e8e8982587919de355de03e 611 Gene3D G3DSA:2.30.110.50 15 333 8.9E-70 T 13-10-2018 VEA_000029 2a53cda64e8e8982587919de355de03e 611 Gene3D G3DSA:3.30.1920.30 230 293 8.9E-70 T 13-10-2018 VEA_000029 2a53cda64e8e8982587919de355de03e 611 Pfam PF05954 Phage late control gene D protein (GPD) 30 334 2.8E-73 T 13-10-2018 VEA_000029 2a53cda64e8e8982587919de355de03e 611 SUPERFAMILY SSF69279 12 195 9.64E-44 T 13-10-2018 VEA_000029 2a53cda64e8e8982587919de355de03e 611 Gene3D G3DSA:2.40.50.230 363 465 1.7E-42 T 13-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily VEA_000029 2a53cda64e8e8982587919de355de03e 611 SUPERFAMILY SSF69349 450 602 3.06E-36 T 13-10-2018 VEA_000029 2a53cda64e8e8982587919de355de03e 611 SUPERFAMILY SSF69255 372 460 7.59E-33 T 13-10-2018 VEA_000029 2a53cda64e8e8982587919de355de03e 611 Gene3D G3DSA:3.55.50.10 109 199 8.9E-70 T 13-10-2018 VEA_000029 2a53cda64e8e8982587919de355de03e 611 SUPERFAMILY SSF69279 213 372 9.52E-9 T 13-10-2018 VEA_000029 2a53cda64e8e8982587919de355de03e 611 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 11 530 1.5E-169 T 13-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset VEA_000029 2a53cda64e8e8982587919de355de03e 611 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 24 512 2.1E-112 T 13-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein VEA_004037 dcc4833ec374709a409233fcec83e9b9 204 Pfam PF03942 DTW domain 3 188 1.0E-47 T 13-10-2018 IPR005636 DTW VEA_004037 dcc4833ec374709a409233fcec83e9b9 204 SMART SM01144 1 193 4.6E-70 T 13-10-2018 IPR005636 DTW VEA_001046 ada546d27a35598364357dda3dedcb62 140 Gene3D G3DSA:3.30.300.20 44 140 1.1E-31 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta VEA_001046 ada546d27a35598364357dda3dedcb62 140 SUPERFAMILY SSF82784 1 135 1.05E-41 T 13-10-2018 IPR036102 OsmC/Ohr superfamily VEA_001046 ada546d27a35598364357dda3dedcb62 140 Pfam PF02566 OsmC-like protein 38 133 1.8E-17 T 13-10-2018 IPR003718 OsmC/Ohr family VEA_001046 ada546d27a35598364357dda3dedcb62 140 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 4 135 8.0E-52 T 13-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 VEA_001046 ada546d27a35598364357dda3dedcb62 140 Gene3D G3DSA:2.20.25.10 1 43 1.6E-21 T 13-10-2018 VEA_002684 330486c8608cb965e847b96ad969f964 1163 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 2 810 0.0 T 13-10-2018 VEA_002684 330486c8608cb965e847b96ad969f964 1163 Gene3D G3DSA:1.10.486.10 457 669 2.4E-194 T 13-10-2018 VEA_002684 330486c8608cb965e847b96ad969f964 1163 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1154 20.975 T 13-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 VEA_002684 330486c8608cb965e847b96ad969f964 1163 SUPERFAMILY SSF52980 838 1145 1.18E-75 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VEA_002684 330486c8608cb965e847b96ad969f964 1163 Gene3D G3DSA:1.10.10.160 79 187 4.9E-127 T 13-10-2018 IPR013986 DExx box DNA helicase domain superfamily VEA_002684 330486c8608cb965e847b96ad969f964 1163 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1122 0.0 T 13-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 VEA_002684 330486c8608cb965e847b96ad969f964 1163 Gene3D G3DSA:3.40.50.10930 4 321 4.9E-127 T 13-10-2018 VEA_002684 330486c8608cb965e847b96ad969f964 1163 PIRSF PIRSF000980 1 1161 0.0 T 13-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 VEA_002684 330486c8608cb965e847b96ad969f964 1163 SUPERFAMILY SSF52540 363 815 8.06E-104 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002684 330486c8608cb965e847b96ad969f964 1163 Gene3D G3DSA:3.40.50.300 339 811 2.4E-194 T 13-10-2018 VEA_002684 330486c8608cb965e847b96ad969f964 1163 Gene3D G3DSA:1.10.10.990 878 956 3.1E-22 T 13-10-2018 VEA_002684 330486c8608cb965e847b96ad969f964 1163 SUPERFAMILY SSF52540 2 351 1.7E-125 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001716 7fc5641f69291cbf481ff2b64259efcd 126 SUPERFAMILY SSF64263 1 119 5.36E-51 T 13-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001716 7fc5641f69291cbf481ff2b64259efcd 126 Pfam PF01196 Ribosomal protein L17 20 116 1.0E-34 T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001716 7fc5641f69291cbf481ff2b64259efcd 126 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 5.5E-49 T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001716 7fc5641f69291cbf481ff2b64259efcd 126 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001716 7fc5641f69291cbf481ff2b64259efcd 126 Gene3D G3DSA:3.90.1030.10 1 117 4.0E-48 T 13-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001716 7fc5641f69291cbf481ff2b64259efcd 126 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.798 T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001551 7e8420e9cd6da22c8cddd201193b2065 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.7E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_001551 7e8420e9cd6da22c8cddd201193b2065 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 2.7E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_001551 7e8420e9cd6da22c8cddd201193b2065 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 2.7E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_001551 7e8420e9cd6da22c8cddd201193b2065 252 Gene3D G3DSA:3.40.50.720 1 252 6.6E-71 T 13-10-2018 VEA_001551 7e8420e9cd6da22c8cddd201193b2065 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 193 0.0016 T 13-10-2018 VEA_001551 7e8420e9cd6da22c8cddd201193b2065 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 7.7E-33 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_001551 7e8420e9cd6da22c8cddd201193b2065 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 7.7E-33 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_001551 7e8420e9cd6da22c8cddd201193b2065 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 7.7E-33 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_001551 7e8420e9cd6da22c8cddd201193b2065 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 7.7E-33 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_001551 7e8420e9cd6da22c8cddd201193b2065 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 7.7E-33 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_001551 7e8420e9cd6da22c8cddd201193b2065 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 7.7E-33 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_001551 7e8420e9cd6da22c8cddd201193b2065 252 SUPERFAMILY SSF51735 4 250 2.36E-67 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_001551 7e8420e9cd6da22c8cddd201193b2065 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 2.6E-53 T 13-10-2018 VEA_001551 7e8420e9cd6da22c8cddd201193b2065 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VEA_004126 a2768401993f35200a13f91dfa263f7e 149 Gene3D G3DSA:1.10.10.10 1 84 9.8E-35 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_004126 a2768401993f35200a13f91dfa263f7e 149 SUPERFAMILY SSF46785 5 135 7.5E-44 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_004126 a2768401993f35200a13f91dfa263f7e 149 Gene3D G3DSA:3.30.1490.190 85 141 2.3E-23 T 13-10-2018 VEA_004126 a2768401993f35200a13f91dfa263f7e 149 Pfam PF01475 Ferric uptake regulator family 11 130 1.5E-46 T 13-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 VEA_003013 d5fc01943c7146bfc26dceb7820a7c3e 317 Gene3D G3DSA:2.40.50.180 39 158 2.7E-27 T 13-10-2018 VEA_003013 d5fc01943c7146bfc26dceb7820a7c3e 317 SMART SM00260 17 158 7.7E-27 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VEA_003013 d5fc01943c7146bfc26dceb7820a7c3e 317 SUPERFAMILY SSF52172 183 311 2.85E-21 T 13-10-2018 IPR011006 CheY-like superfamily VEA_003013 d5fc01943c7146bfc26dceb7820a7c3e 317 Gene3D G3DSA:3.40.50.2300 183 313 3.9E-21 T 13-10-2018 VEA_003013 d5fc01943c7146bfc26dceb7820a7c3e 317 SMART SM00448 184 305 3.7E-12 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_003013 d5fc01943c7146bfc26dceb7820a7c3e 317 PIRSF PIRSF002867 1 313 2.9E-106 T 13-10-2018 IPR024181 Chemotaxis response regulator CheV VEA_003013 d5fc01943c7146bfc26dceb7820a7c3e 317 SUPERFAMILY SSF50341 16 163 9.81E-33 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VEA_003013 d5fc01943c7146bfc26dceb7820a7c3e 317 Gene3D G3DSA:2.30.30.40 24 152 2.7E-27 T 13-10-2018 VEA_003013 d5fc01943c7146bfc26dceb7820a7c3e 317 Pfam PF00072 Response regulator receiver domain 186 303 2.1E-14 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_003013 d5fc01943c7146bfc26dceb7820a7c3e 317 Pfam PF01584 CheW-like domain 21 160 3.3E-33 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VEA_004333 680bdb6130f13bf6f5e1f5095c28becc 1199 SUPERFAMILY SSF52467 6 212 1.36E-7 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VEA_004333 680bdb6130f13bf6f5e1f5095c28becc 1199 Pfam PF13289 SIR2-like domain 105 248 1.6E-19 T 13-10-2018 IPR039444 SIR2-like domain VEA_000368 e696697b9a561bdb670ac7bf6dafc9b3 673 SUPERFAMILY SSF55073 536 667 5.49E-41 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_000368 e696697b9a561bdb670ac7bf6dafc9b3 673 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 532 668 4.5E-44 T 13-10-2018 IPR000160 GGDEF domain VEA_000368 e696697b9a561bdb670ac7bf6dafc9b3 673 SMART SM00267 508 670 1.4E-39 T 13-10-2018 IPR000160 GGDEF domain VEA_000368 e696697b9a561bdb670ac7bf6dafc9b3 673 SUPERFAMILY SSF48452 64 253 1.9E-14 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_000368 e696697b9a561bdb670ac7bf6dafc9b3 673 Gene3D G3DSA:1.25.40.10 114 373 2.7E-16 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_000368 e696697b9a561bdb670ac7bf6dafc9b3 673 SUPERFAMILY SSF48452 225 389 1.29E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_000368 e696697b9a561bdb670ac7bf6dafc9b3 673 Pfam PF00990 Diguanylate cyclase, GGDEF domain 534 665 1.1E-37 T 13-10-2018 IPR000160 GGDEF domain VEA_001496 b24f09617bb55f6fa76891c1162ba671 416 SMART SM00487 27 232 3.8E-56 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEA_001496 b24f09617bb55f6fa76891c1162ba671 416 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 164 172 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VEA_001496 b24f09617bb55f6fa76891c1162ba671 416 Gene3D G3DSA:3.40.50.300 222 393 3.7E-47 T 13-10-2018 VEA_001496 b24f09617bb55f6fa76891c1162ba671 416 Pfam PF00270 DEAD/DEAH box helicase 32 206 1.9E-49 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VEA_001496 b24f09617bb55f6fa76891c1162ba671 416 SMART SM00490 267 348 1.1E-32 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_001496 b24f09617bb55f6fa76891c1162ba671 416 Pfam PF00271 Helicase conserved C-terminal domain 241 348 3.0E-29 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_001496 b24f09617bb55f6fa76891c1162ba671 416 Gene3D G3DSA:3.40.50.300 2 220 8.5E-75 T 13-10-2018 VEA_001496 b24f09617bb55f6fa76891c1162ba671 416 SUPERFAMILY SSF52540 86 370 2.67E-72 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002559 a372af2dd4a2564d9ec722d03c80a063 309 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 8 308 2.0E-133 T 13-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 VEA_002559 a372af2dd4a2564d9ec722d03c80a063 309 PIRSF PIRSF026649 4 306 8.7E-72 T 13-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VEA_002559 a372af2dd4a2564d9ec722d03c80a063 309 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 6 308 43.285 T 13-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 VEA_002559 a372af2dd4a2564d9ec722d03c80a063 309 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 8 299 1.2E-68 T 13-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VEA_002364 553a3b5d5b46605333a1240e0d393368 669 SMART SM00052 397 640 3.1E-15 T 13-10-2018 IPR001633 EAL domain VEA_002364 553a3b5d5b46605333a1240e0d393368 669 Gene3D G3DSA:3.30.70.270 211 387 8.2E-23 T 13-10-2018 VEA_002364 553a3b5d5b46605333a1240e0d393368 669 SMART SM00267 216 386 2.5E-9 T 13-10-2018 IPR000160 GGDEF domain VEA_002364 553a3b5d5b46605333a1240e0d393368 669 SUPERFAMILY SSF141868 408 638 1.83E-37 T 13-10-2018 IPR035919 EAL domain superfamily VEA_002364 553a3b5d5b46605333a1240e0d393368 669 Pfam PF00563 EAL domain 407 637 2.7E-51 T 13-10-2018 IPR001633 EAL domain VEA_002364 553a3b5d5b46605333a1240e0d393368 669 SUPERFAMILY SSF55073 233 386 9.42E-19 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_002364 553a3b5d5b46605333a1240e0d393368 669 Pfam PF00990 Diguanylate cyclase, GGDEF domain 229 381 1.0E-19 T 13-10-2018 IPR000160 GGDEF domain VEA_002364 553a3b5d5b46605333a1240e0d393368 669 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 39 134 2.0E-28 T 13-10-2018 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 VEA_002364 553a3b5d5b46605333a1240e0d393368 669 Gene3D G3DSA:3.20.20.450 397 641 3.4E-37 T 13-10-2018 IPR035919 EAL domain superfamily VEA_003517 44a5750c2e868bd893ec5a0e58c10486 37 Pfam PF00877 NlpC/P60 family 1 34 5.7E-5 T 13-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain VEA_003517 44a5750c2e868bd893ec5a0e58c10486 37 Gene3D G3DSA:3.90.1720.10 1 37 1.2E-8 T 13-10-2018 VEA_003517 44a5750c2e868bd893ec5a0e58c10486 37 SUPERFAMILY SSF54001 1 35 2.45E-7 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily VEA_000988 dd7f076831f69a1a8599788a3c4fdb94 288 Pfam PF00005 ABC transporter 36 191 9.9E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_000988 dd7f076831f69a1a8599788a3c4fdb94 288 SMART SM00382 44 250 2.5E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_000988 dd7f076831f69a1a8599788a3c4fdb94 288 Gene3D G3DSA:3.40.50.300 13 287 4.5E-86 T 13-10-2018 VEA_000988 dd7f076831f69a1a8599788a3c4fdb94 288 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_000988 dd7f076831f69a1a8599788a3c4fdb94 288 SUPERFAMILY SSF52540 15 263 4.85E-68 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000094 e521803b0f7222dd3fce781d1dc8cfbf 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.7E-15 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000094 e521803b0f7222dd3fce781d1dc8cfbf 294 SUPERFAMILY SSF46785 1 87 6.74E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000094 e521803b0f7222dd3fce781d1dc8cfbf 294 Gene3D G3DSA:3.40.190.290 91 292 4.3E-29 T 13-10-2018 VEA_000094 e521803b0f7222dd3fce781d1dc8cfbf 294 SUPERFAMILY SSF53850 88 293 2.71E-27 T 13-10-2018 VEA_000094 e521803b0f7222dd3fce781d1dc8cfbf 294 Pfam PF03466 LysR substrate binding domain 87 285 7.3E-24 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_000094 e521803b0f7222dd3fce781d1dc8cfbf 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.8E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000094 e521803b0f7222dd3fce781d1dc8cfbf 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.8E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000094 e521803b0f7222dd3fce781d1dc8cfbf 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.8E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000094 e521803b0f7222dd3fce781d1dc8cfbf 294 Gene3D G3DSA:1.10.10.10 1 84 3.7E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_003691 7a6f16224e6a302f509540abe2c55abc 177 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 4 174 1.1E-59 T 13-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 VEA_003691 7a6f16224e6a302f509540abe2c55abc 177 Gene3D G3DSA:3.40.50.300 3 176 2.4E-58 T 13-10-2018 VEA_003691 7a6f16224e6a302f509540abe2c55abc 177 SUPERFAMILY SSF52540 4 176 6.55E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003691 7a6f16224e6a302f509540abe2c55abc 177 PIRSF PIRSF006135 1 177 2.5E-54 T 13-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 VEA_002928 4dc5d30baddf9a3502b0289e1ebec56c 371 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 261 275 - T 13-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VEA_002928 4dc5d30baddf9a3502b0289e1ebec56c 371 SUPERFAMILY SSF55347 133 354 8.26E-79 T 13-10-2018 VEA_002928 4dc5d30baddf9a3502b0289e1ebec56c 371 SMART SM00859 2 121 1.4E-23 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VEA_002928 4dc5d30baddf9a3502b0289e1ebec56c 371 PIRSF PIRSF000148 1 371 6.1E-66 T 13-10-2018 VEA_002928 4dc5d30baddf9a3502b0289e1ebec56c 371 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 120 1.2E-22 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VEA_002928 4dc5d30baddf9a3502b0289e1ebec56c 371 Gene3D G3DSA:3.30.360.10 134 350 1.3E-146 T 13-10-2018 VEA_002928 4dc5d30baddf9a3502b0289e1ebec56c 371 Gene3D G3DSA:3.40.50.720 3 356 1.3E-146 T 13-10-2018 VEA_002928 4dc5d30baddf9a3502b0289e1ebec56c 371 SUPERFAMILY SSF51735 1 146 3.38E-49 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_002928 4dc5d30baddf9a3502b0289e1ebec56c 371 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 367 31.902 T 13-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VEA_002928 4dc5d30baddf9a3502b0289e1ebec56c 371 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 143 353 4.5E-58 T 13-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VEA_002928 4dc5d30baddf9a3502b0289e1ebec56c 371 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 1 366 3.3E-190 T 13-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VEA_003965 4e38b9a2b969872d81c4a23fbe657fd7 181 Gene3D G3DSA:1.20.1270.340 1 98 1.5E-15 T 13-10-2018 IPR038338 PriB/PriC superfamily VEA_003965 4e38b9a2b969872d81c4a23fbe657fd7 181 Pfam PF07445 Primosomal replication protein priC 4 178 2.6E-50 T 13-10-2018 IPR010890 Primosomal replication PriB/PriC VEA_003763 39628180959a90dd1b993ae4c5e32342 511 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 344 495 5.5E-38 T 13-10-2018 IPR006512 YidE/YbjL duplication VEA_003763 39628180959a90dd1b993ae4c5e32342 511 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 6 122 3.6E-21 T 13-10-2018 IPR006512 YidE/YbjL duplication VEA_003763 39628180959a90dd1b993ae4c5e32342 511 SUPERFAMILY SSF116726 182 236 2.49E-10 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VEA_003763 39628180959a90dd1b993ae4c5e32342 511 Pfam PF02080 TrkA-C domain 260 325 1.3E-9 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VEA_003763 39628180959a90dd1b993ae4c5e32342 511 Pfam PF02080 TrkA-C domain 183 232 2.0E-8 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VEA_003763 39628180959a90dd1b993ae4c5e32342 511 SUPERFAMILY SSF116726 245 328 4.71E-10 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VEA_003763 39628180959a90dd1b993ae4c5e32342 511 Pfam PF06826 Predicted Permease Membrane Region 340 508 3.7E-43 T 13-10-2018 IPR006512 YidE/YbjL duplication VEA_003763 39628180959a90dd1b993ae4c5e32342 511 Pfam PF06826 Predicted Permease Membrane Region 5 136 4.0E-26 T 13-10-2018 IPR006512 YidE/YbjL duplication VEA_003763 39628180959a90dd1b993ae4c5e32342 511 Gene3D G3DSA:3.30.70.1450 180 239 1.6E-9 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VEA_003085 615dc5b30c8d010a3d2b0bf2dc2986ab 479 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 72 90 - T 13-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 VEA_003085 615dc5b30c8d010a3d2b0bf2dc2986ab 479 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 280 479 30.337 T 13-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 VEA_003085 615dc5b30c8d010a3d2b0bf2dc2986ab 479 SUPERFAMILY SSF51366 282 477 2.67E-54 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VEA_003085 615dc5b30c8d010a3d2b0bf2dc2986ab 479 Gene3D G3DSA:3.20.20.70 281 473 1.4E-174 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_003085 615dc5b30c8d010a3d2b0bf2dc2986ab 479 Gene3D G3DSA:3.20.20.70 30 280 1.4E-174 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_003085 615dc5b30c8d010a3d2b0bf2dc2986ab 479 Pfam PF00218 Indole-3-glycerol phosphate synthase 27 276 1.2E-94 T 13-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 VEA_003085 615dc5b30c8d010a3d2b0bf2dc2986ab 479 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 25 279 34.982 T 13-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 VEA_003085 615dc5b30c8d010a3d2b0bf2dc2986ab 479 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 282 473 1.3E-57 T 13-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 VEA_003085 615dc5b30c8d010a3d2b0bf2dc2986ab 479 SUPERFAMILY SSF51366 23 276 3.77E-82 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VEA_000890 a868d0b28b4f983124a8e904931cbb66 105 Pfam PF13642 protein structure with unknown function 4 103 1.1E-34 T 13-10-2018 IPR025284 Protein of unknown function DUF4144 VEA_000890 a868d0b28b4f983124a8e904931cbb66 105 Gene3D G3DSA:2.40.10.320 1 59 1.9E-5 T 13-10-2018 VEA_002530 fb6c3583502c88139b6af79bfe354525 522 Gene3D G3DSA:3.30.590.20 17 522 1.4E-191 T 13-10-2018 VEA_002530 fb6c3583502c88139b6af79bfe354525 522 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 8 515 4.5E-207 T 13-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 VEA_002530 fb6c3583502c88139b6af79bfe354525 522 Pfam PF04262 Glutamate-cysteine ligase 13 378 6.0E-167 T 13-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 VEA_002530 fb6c3583502c88139b6af79bfe354525 522 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 522 220.409 T 13-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 VEA_002530 fb6c3583502c88139b6af79bfe354525 522 SUPERFAMILY SSF55931 6 513 2.03E-200 T 13-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 VEA_003755 5ad70ef7f6f347d0933438aa780b8134 306 Pfam PF08668 HDOD domain 39 233 3.8E-37 T 13-10-2018 IPR013976 Metal-dependent hydrolase HDOD VEA_003755 5ad70ef7f6f347d0933438aa780b8134 306 SUPERFAMILY SSF109604 24 297 1.29E-39 T 13-10-2018 VEA_003755 5ad70ef7f6f347d0933438aa780b8134 306 Gene3D G3DSA:1.10.3210.10 19 296 1.6E-39 T 13-10-2018 VEA_003000 82e7dd259a0f6eb1b2aa0b2642280209 338 Gene3D G3DSA:3.30.160.60 302 338 7.6E-18 T 13-10-2018 VEA_003000 82e7dd259a0f6eb1b2aa0b2642280209 338 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 4 336 5.2E-103 T 13-10-2018 IPR003770 Endolytic murein transglycosylase VEA_003000 82e7dd259a0f6eb1b2aa0b2642280209 338 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 5 336 33.456 T 13-10-2018 IPR003770 Endolytic murein transglycosylase VEA_003000 82e7dd259a0f6eb1b2aa0b2642280209 338 Pfam PF02618 YceG-like family 43 328 2.0E-83 T 13-10-2018 IPR003770 Endolytic murein transglycosylase VEA_003000 82e7dd259a0f6eb1b2aa0b2642280209 338 Gene3D G3DSA:1.10.8.1150 38 111 1.9E-7 T 13-10-2018 VEA_002246 a8cccb0866fb4a8e216147010136c800 144 Pfam PF00581 Rhodanese-like domain 44 135 7.7E-17 T 13-10-2018 IPR001763 Rhodanese-like domain VEA_002246 a8cccb0866fb4a8e216147010136c800 144 SUPERFAMILY SSF52821 15 143 2.75E-30 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily VEA_002246 a8cccb0866fb4a8e216147010136c800 144 SMART SM00450 40 138 6.7E-20 T 13-10-2018 IPR001763 Rhodanese-like domain VEA_002246 a8cccb0866fb4a8e216147010136c800 144 Gene3D G3DSA:3.40.250.10 22 143 2.6E-24 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily VEA_003642 d9096fc1fee0c7112c3013144876517e 144 Pfam PF06127 Protein of unknown function (DUF962) 1 142 6.9E-21 T 13-10-2018 IPR009305 Protein of unknown function DUF962 VEA_001273 13fbd389ccb17bde1a79f86ff1d9a797 638 SUPERFAMILY SSF58104 329 638 5.49E-78 T 13-10-2018 VEA_001273 13fbd389ccb17bde1a79f86ff1d9a797 638 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 474 501 1.7E-24 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEA_001273 13fbd389ccb17bde1a79f86ff1d9a797 638 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 284 304 1.7E-24 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEA_001273 13fbd389ccb17bde1a79f86ff1d9a797 638 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 503 532 1.7E-24 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEA_001273 13fbd389ccb17bde1a79f86ff1d9a797 638 Pfam PF00672 HAMP domain 308 357 3.4E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_001273 13fbd389ccb17bde1a79f86ff1d9a797 638 Gene3D G3DSA:3.30.450.20 165 283 2.5E-17 T 13-10-2018 VEA_001273 13fbd389ccb17bde1a79f86ff1d9a797 638 SMART SM00304 307 361 2.0E-11 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_001273 13fbd389ccb17bde1a79f86ff1d9a797 638 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 421 604 5.7E-42 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_001273 13fbd389ccb17bde1a79f86ff1d9a797 638 Gene3D G3DSA:1.10.287.950 306 638 1.4E-76 T 13-10-2018 VEA_001273 13fbd389ccb17bde1a79f86ff1d9a797 638 SMART SM00283 376 637 1.8E-84 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_002776 b640301262c685acc7c7af668d977af7 591 Pfam PF00916 Sulfate permease family 28 393 2.9E-83 T 13-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VEA_002776 b640301262c685acc7c7af668d977af7 591 Pfam PF01740 STAS domain 451 543 1.6E-16 T 13-10-2018 IPR002645 STAS domain VEA_002776 b640301262c685acc7c7af668d977af7 591 Gene3D G3DSA:3.30.750.24 439 558 9.8E-21 T 13-10-2018 IPR036513 STAS domain superfamily VEA_002776 b640301262c685acc7c7af668d977af7 591 SUPERFAMILY SSF52091 450 540 4.51E-13 T 13-10-2018 IPR036513 STAS domain superfamily VEA_002000 a379c7b358d830ad9c52bf914ad4dc00 688 SMART SM00836 583 686 0.0054 T 13-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 VEA_002000 a379c7b358d830ad9c52bf914ad4dc00 688 SUPERFAMILY SSF109604 351 489 5.49E-12 T 13-10-2018 VEA_002000 a379c7b358d830ad9c52bf914ad4dc00 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 245 260 1.6E-35 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VEA_002000 a379c7b358d830ad9c52bf914ad4dc00 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 317 333 1.6E-35 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VEA_002000 a379c7b358d830ad9c52bf914ad4dc00 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 1.6E-35 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VEA_002000 a379c7b358d830ad9c52bf914ad4dc00 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 1.6E-35 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VEA_002000 a379c7b358d830ad9c52bf914ad4dc00 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 49 61 1.6E-35 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VEA_002000 a379c7b358d830ad9c52bf914ad4dc00 688 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 686 25.986 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VEA_002000 a379c7b358d830ad9c52bf914ad4dc00 688 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 687 1.2E-296 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VEA_002000 a379c7b358d830ad9c52bf914ad4dc00 688 Pfam PF05746 DALR anticodon binding domain 580 677 4.4E-10 T 13-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 VEA_002000 a379c7b358d830ad9c52bf914ad4dc00 688 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 549 2.6E-206 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VEA_004014 0c13b053f953ca6c2ecf25120a712894 286 SUPERFAMILY SSF54637 6 114 4.7E-40 T 13-10-2018 IPR029069 HotDog domain superfamily VEA_004014 0c13b053f953ca6c2ecf25120a712894 286 Gene3D G3DSA:3.10.129.90 2 286 2.9E-106 T 13-10-2018 VEA_004014 0c13b053f953ca6c2ecf25120a712894 286 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 1.8E-94 T 13-10-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 VEA_004014 0c13b053f953ca6c2ecf25120a712894 286 SUPERFAMILY SSF54637 116 283 1.59E-58 T 13-10-2018 IPR029069 HotDog domain superfamily VEA_004014 0c13b053f953ca6c2ecf25120a712894 286 Pfam PF13622 Thioesterase-like superfamily 33 282 7.3E-61 T 13-10-2018 VEA_001838 7a83914570cb46fbd8b1e719e9700136 142 Gene3D G3DSA:3.10.450.430 10 141 1.7E-34 T 13-10-2018 VEA_001838 7a83914570cb46fbd8b1e719e9700136 142 Pfam PF10980 Protein of unknown function (DUF2787) 32 139 8.4E-28 T 13-10-2018 IPR021248 Protein of unknown function DUF2787 VEA_002192 600a373be918ea37fb65a96ffae2c096 385 Pfam PF07690 Major Facilitator Superfamily 7 313 1.9E-35 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEA_002192 600a373be918ea37fb65a96ffae2c096 385 Gene3D G3DSA:1.20.1250.20 2 373 4.0E-47 T 13-10-2018 VEA_002192 600a373be918ea37fb65a96ffae2c096 385 PRINTS PR01035 Tetracycline resistance protein signature 293 313 2.6E-9 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VEA_002192 600a373be918ea37fb65a96ffae2c096 385 PRINTS PR01035 Tetracycline resistance protein signature 39 58 2.6E-9 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VEA_002192 600a373be918ea37fb65a96ffae2c096 385 PRINTS PR01035 Tetracycline resistance protein signature 237 257 2.6E-9 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VEA_002192 600a373be918ea37fb65a96ffae2c096 385 PRINTS PR01035 Tetracycline resistance protein signature 97 118 2.6E-9 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VEA_002192 600a373be918ea37fb65a96ffae2c096 385 PRINTS PR01035 Tetracycline resistance protein signature 127 149 2.6E-9 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VEA_002192 600a373be918ea37fb65a96ffae2c096 385 SUPERFAMILY SSF103473 5 371 4.19E-52 T 13-10-2018 IPR036259 MFS transporter superfamily VEA_004136 7e804981be4c853944204aa6578771e4 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 7.2E-75 T 13-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 VEA_004136 7e804981be4c853944204aa6578771e4 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 13-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VEA_004136 7e804981be4c853944204aa6578771e4 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 53.013 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VEA_004136 7e804981be4c853944204aa6578771e4 214 Gene3D G3DSA:3.40.50.300 1 214 1.0E-77 T 13-10-2018 VEA_004136 7e804981be4c853944204aa6578771e4 214 SUPERFAMILY SSF52540 1 193 4.47E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_004136 7e804981be4c853944204aa6578771e4 214 Pfam PF00406 Adenylate kinase 5 185 2.6E-59 T 13-10-2018 VEA_004136 7e804981be4c853944204aa6578771e4 214 PRINTS PR00094 Adenylate kinase signature 4 17 2.0E-35 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VEA_004136 7e804981be4c853944204aa6578771e4 214 PRINTS PR00094 Adenylate kinase signature 32 46 2.0E-35 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VEA_004136 7e804981be4c853944204aa6578771e4 214 PRINTS PR00094 Adenylate kinase signature 156 171 2.0E-35 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VEA_004136 7e804981be4c853944204aa6578771e4 214 PRINTS PR00094 Adenylate kinase signature 173 187 2.0E-35 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VEA_004136 7e804981be4c853944204aa6578771e4 214 PRINTS PR00094 Adenylate kinase signature 81 97 2.0E-35 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VEA_004136 7e804981be4c853944204aa6578771e4 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 9.0E-15 T 13-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 VEA_000526 a221fcb246df3984ad3b60883d8b6de5 222 Gene3D G3DSA:2.30.30.40 54 129 7.3E-9 T 13-10-2018 VEA_000526 a221fcb246df3984ad3b60883d8b6de5 222 Pfam PF08239 Bacterial SH3 domain 72 125 2.6E-9 T 13-10-2018 IPR003646 SH3-like domain, bacterial-type VEA_004253 536fbe6365f29ab5a27aaa1f919a36cc 465 Gene3D G3DSA:3.30.2130.30 1 157 1.5E-30 T 13-10-2018 VEA_004253 536fbe6365f29ab5a27aaa1f919a36cc 465 Gene3D G3DSA:3.40.250.10 381 465 1.3E-11 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily VEA_004253 536fbe6365f29ab5a27aaa1f919a36cc 465 SUPERFAMILY SSF143437 2 156 8.2E-41 T 13-10-2018 VEA_004253 536fbe6365f29ab5a27aaa1f919a36cc 465 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 158 352 9.8E-73 T 13-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 VEA_004253 536fbe6365f29ab5a27aaa1f919a36cc 465 SMART SM00981 58 148 6.8E-24 T 13-10-2018 IPR004114 THUMP domain GO:0003723 VEA_004253 536fbe6365f29ab5a27aaa1f919a36cc 465 SUPERFAMILY SSF52821 385 464 1.02E-12 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily VEA_004253 536fbe6365f29ab5a27aaa1f919a36cc 465 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 465 216.772 T 13-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 VEA_004253 536fbe6365f29ab5a27aaa1f919a36cc 465 Pfam PF02926 THUMP domain 27 141 9.0E-24 T 13-10-2018 IPR004114 THUMP domain GO:0003723 VEA_004253 536fbe6365f29ab5a27aaa1f919a36cc 465 SUPERFAMILY SSF52402 157 355 2.43E-42 T 13-10-2018 VEA_004253 536fbe6365f29ab5a27aaa1f919a36cc 465 Gene3D G3DSA:3.40.50.620 158 380 2.1E-51 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_004253 536fbe6365f29ab5a27aaa1f919a36cc 465 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 365 465 8.5E-43 T 13-10-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 KEGG: 00730+2.8.1.4 VEA_004253 536fbe6365f29ab5a27aaa1f919a36cc 465 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 1 358 6.7E-111 T 13-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 VEA_000421 ddbde837e2e41d8e9dc49a2630894a73 328 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 34 92 1.3E-20 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000421 ddbde837e2e41d8e9dc49a2630894a73 328 Gene3D G3DSA:3.40.190.290 121 321 5.6E-65 T 13-10-2018 VEA_000421 ddbde837e2e41d8e9dc49a2630894a73 328 Gene3D G3DSA:1.10.10.10 31 118 1.5E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000421 ddbde837e2e41d8e9dc49a2630894a73 328 SUPERFAMILY SSF46785 32 112 2.01E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000421 ddbde837e2e41d8e9dc49a2630894a73 328 Pfam PF03466 LysR substrate binding domain 118 320 2.0E-38 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_000421 ddbde837e2e41d8e9dc49a2630894a73 328 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 59 69 4.1E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000421 ddbde837e2e41d8e9dc49a2630894a73 328 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 59 4.1E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000421 ddbde837e2e41d8e9dc49a2630894a73 328 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 69 80 4.1E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000421 ddbde837e2e41d8e9dc49a2630894a73 328 SUPERFAMILY SSF53850 118 324 3.41E-43 T 13-10-2018 VEA_000421 ddbde837e2e41d8e9dc49a2630894a73 328 SMART SM00347 24 118 0.0022 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEA_003435 ebcac42ef26cfc0d8cea8816a131f2f8 1613 SUPERFAMILY SSF53223 754 940 1.82E-25 T 13-10-2018 VEA_003435 ebcac42ef26cfc0d8cea8816a131f2f8 1613 PIRSF PIRSF036761 1 1610 0.0 T 13-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 VEA_003435 ebcac42ef26cfc0d8cea8816a131f2f8 1613 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 76 1602 0.0 T 13-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 VEA_003435 ebcac42ef26cfc0d8cea8816a131f2f8 1613 SUPERFAMILY SSF51735 945 1281 1.44E-26 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_000926 e2540f0df4fc7515ba8404b50e1acdf3 236 Pfam PF00929 Exonuclease 53 216 3.1E-17 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VEA_000926 e2540f0df4fc7515ba8404b50e1acdf3 236 Gene3D G3DSA:3.30.420.10 45 226 5.0E-33 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VEA_000926 e2540f0df4fc7515ba8404b50e1acdf3 236 SUPERFAMILY SSF53098 44 226 2.12E-36 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VEA_000926 e2540f0df4fc7515ba8404b50e1acdf3 236 SMART SM00479 51 225 8.0E-21 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VEA_003356 666b4130cd4245d68fb1911b044cbaae 271 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 92 216 1.1E-16 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VEA_003356 666b4130cd4245d68fb1911b044cbaae 271 Gene3D G3DSA:2.40.30.170 154 270 6.5E-36 T 13-10-2018 VEA_003356 666b4130cd4245d68fb1911b044cbaae 271 Pfam PF00529 HlyD membrane-fusion protein of T1SS 217 266 4.1E-9 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VEA_003356 666b4130cd4245d68fb1911b044cbaae 271 SUPERFAMILY SSF111369 33 212 5.75E-11 T 13-10-2018 VEA_004162 cef35a12f3dad2f406e5a0fb9b03c08d 384 PRINTS PR00207 Flagellin signature 111 134 2.3E-24 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VEA_004162 cef35a12f3dad2f406e5a0fb9b03c08d 384 PRINTS PR00207 Flagellin signature 37 54 2.3E-24 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VEA_004162 cef35a12f3dad2f406e5a0fb9b03c08d 384 PRINTS PR00207 Flagellin signature 76 95 2.3E-24 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VEA_004162 cef35a12f3dad2f406e5a0fb9b03c08d 384 Gene3D G3DSA:3.30.70.2120 174 282 2.2E-75 T 13-10-2018 VEA_004162 cef35a12f3dad2f406e5a0fb9b03c08d 384 Pfam PF07196 Flagellin hook IN motif 195 252 1.3E-10 T 13-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VEA_004162 cef35a12f3dad2f406e5a0fb9b03c08d 384 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 5.9E-43 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VEA_004162 cef35a12f3dad2f406e5a0fb9b03c08d 384 Gene3D G3DSA:1.20.1330.10 44 333 2.2E-75 T 13-10-2018 VEA_004162 cef35a12f3dad2f406e5a0fb9b03c08d 384 Pfam PF00700 Bacterial flagellin C-terminal helical region 299 383 3.3E-26 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VEA_004162 cef35a12f3dad2f406e5a0fb9b03c08d 384 Gene3D G3DSA:1.10.8.410 334 384 1.4E-21 T 13-10-2018 VEA_004162 cef35a12f3dad2f406e5a0fb9b03c08d 384 SUPERFAMILY SSF64518 1 384 1.57E-96 T 13-10-2018 VEA_002016 53d0ef016b03ba8dd404cc4973ca4b97 540 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 349 9.6E-111 T 13-10-2018 IPR028053 Membrane insertase YidC, N-terminal VEA_002016 53d0ef016b03ba8dd404cc4973ca4b97 540 PRINTS PR01900 YidC translocation/secretion protein signature 336 352 5.1E-27 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VEA_002016 53d0ef016b03ba8dd404cc4973ca4b97 540 PRINTS PR01900 YidC translocation/secretion protein signature 465 480 5.1E-27 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VEA_002016 53d0ef016b03ba8dd404cc4973ca4b97 540 PRINTS PR01900 YidC translocation/secretion protein signature 485 509 5.1E-27 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VEA_002016 53d0ef016b03ba8dd404cc4973ca4b97 540 PRINTS PR00701 60kDa inner membrane protein signature 2 23 3.2E-99 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VEA_002016 53d0ef016b03ba8dd404cc4973ca4b97 540 PRINTS PR00701 60kDa inner membrane protein signature 71 92 3.2E-99 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VEA_002016 53d0ef016b03ba8dd404cc4973ca4b97 540 PRINTS PR00701 60kDa inner membrane protein signature 412 435 3.2E-99 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VEA_002016 53d0ef016b03ba8dd404cc4973ca4b97 540 PRINTS PR00701 60kDa inner membrane protein signature 321 341 3.2E-99 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VEA_002016 53d0ef016b03ba8dd404cc4973ca4b97 540 PRINTS PR00701 60kDa inner membrane protein signature 161 181 3.2E-99 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VEA_002016 53d0ef016b03ba8dd404cc4973ca4b97 540 PRINTS PR00701 60kDa inner membrane protein signature 214 232 3.2E-99 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VEA_002016 53d0ef016b03ba8dd404cc4973ca4b97 540 PRINTS PR00701 60kDa inner membrane protein signature 496 519 3.2E-99 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VEA_002016 53d0ef016b03ba8dd404cc4973ca4b97 540 PRINTS PR00701 60kDa inner membrane protein signature 249 264 3.2E-99 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VEA_002016 53d0ef016b03ba8dd404cc4973ca4b97 540 PRINTS PR00701 60kDa inner membrane protein signature 459 481 3.2E-99 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VEA_002016 53d0ef016b03ba8dd404cc4973ca4b97 540 Pfam PF14849 YidC periplasmic domain 65 339 9.1E-83 T 13-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain VEA_002016 53d0ef016b03ba8dd404cc4973ca4b97 540 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 350 529 8.5E-74 T 13-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002016 53d0ef016b03ba8dd404cc4973ca4b97 540 Gene3D G3DSA:2.70.98.90 61 330 5.5E-90 T 13-10-2018 IPR038221 YidC, periplasmic domain superfamily VEA_002016 53d0ef016b03ba8dd404cc4973ca4b97 540 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 532 25.897 T 13-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 VEA_002016 53d0ef016b03ba8dd404cc4973ca4b97 540 Pfam PF02096 60Kd inner membrane protein 351 530 9.6E-64 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VEA_004006 5c34f1f05878f1a7d4ad59a02a71840f 252 Gene3D G3DSA:3.40.50.1580 1 252 4.8E-81 T 13-10-2018 VEA_004006 5c34f1f05878f1a7d4ad59a02a71840f 252 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 5 251 7.8E-111 T 13-10-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 VEA_004006 5c34f1f05878f1a7d4ad59a02a71840f 252 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 65 80 - T 13-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEA_004006 5c34f1f05878f1a7d4ad59a02a71840f 252 Pfam PF01048 Phosphorylase superfamily 20 244 7.7E-40 T 13-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VEA_004006 5c34f1f05878f1a7d4ad59a02a71840f 252 SUPERFAMILY SSF53167 4 251 3.53E-72 T 13-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 VEA_002460 756b8d48b950c6b2678940489f48fabc 141 SUPERFAMILY SSF53098 3 136 8.95E-37 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VEA_002460 756b8d48b950c6b2678940489f48fabc 141 SMART SM00732 3 104 3.3E-34 T 13-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 VEA_002460 756b8d48b950c6b2678940489f48fabc 141 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 6 136 1.2E-48 T 13-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 VEA_002460 756b8d48b950c6b2678940489f48fabc 141 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 3 139 24.126 T 13-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 VEA_002460 756b8d48b950c6b2678940489f48fabc 141 Gene3D G3DSA:3.30.420.140 1 138 3.2E-39 T 13-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 VEA_002460 756b8d48b950c6b2678940489f48fabc 141 Pfam PF03652 Holliday junction resolvase 4 136 1.1E-35 T 13-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 VEA_000326 9eb9f01e81260068adeb711f4d8bdaae 668 SUPERFAMILY SSF56935 36 668 1.47E-85 T 13-10-2018 VEA_000326 9eb9f01e81260068adeb711f4d8bdaae 668 Pfam PF00593 TonB dependent receptor 234 666 1.6E-40 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VEA_000326 9eb9f01e81260068adeb711f4d8bdaae 668 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 137 5.4E-12 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain VEA_000326 9eb9f01e81260068adeb711f4d8bdaae 668 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 651 668 - T 13-10-2018 IPR010917 TonB-dependent receptor, conserved site VEA_000326 9eb9f01e81260068adeb711f4d8bdaae 668 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 52 668 1.8E-85 T 13-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 VEA_000326 9eb9f01e81260068adeb711f4d8bdaae 668 Gene3D G3DSA:2.40.170.20 151 668 6.4E-109 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VEA_000326 9eb9f01e81260068adeb711f4d8bdaae 668 Gene3D G3DSA:2.170.130.10 42 149 3.8E-30 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VEA_002053 b627540af61ec9ec114d1118c097babf 481 PIRSF PIRSF006247 1 481 3.0E-166 T 13-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 VEA_002053 b627540af61ec9ec114d1118c097babf 481 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 464 2.3E-116 T 13-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 VEA_002053 b627540af61ec9ec114d1118c097babf 481 Pfam PF02386 Cation transport protein 51 475 7.7E-49 T 13-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 VEA_003693 d055d317e11815becb76547cd34a8c2a 347 Pfam PF02277 Phosphoribosyltransferase 2 345 5.4E-128 T 13-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 VEA_003693 d055d317e11815becb76547cd34a8c2a 347 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 2 345 2.3E-130 T 13-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 VEA_003693 d055d317e11815becb76547cd34a8c2a 347 Gene3D G3DSA:1.10.1610.10 12 345 1.8E-121 T 13-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 VEA_003693 d055d317e11815becb76547cd34a8c2a 347 SUPERFAMILY SSF52733 2 346 6.02E-112 T 13-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 VEA_003693 d055d317e11815becb76547cd34a8c2a 347 Gene3D G3DSA:3.40.50.10210 50 328 1.8E-121 T 13-10-2018 VEA_003693 d055d317e11815becb76547cd34a8c2a 347 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 1 347 35.763 T 13-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 VEA_001577 c7d8ba1c8643fca94490fb480322a5d7 551 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 178 308 2.5E-18 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain VEA_001577 c7d8ba1c8643fca94490fb480322a5d7 551 SUPERFAMILY SSF53850 122 545 4.81E-39 T 13-10-2018 VEA_001577 c7d8ba1c8643fca94490fb480322a5d7 551 Gene3D G3DSA:3.40.190.10 112 320 8.3E-28 T 13-10-2018 VEA_001577 c7d8ba1c8643fca94490fb480322a5d7 551 Pfam PF12793 Sugar transport-related sRNA regulator N-term 10 113 4.5E-15 T 13-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain VEA_001927 3bc0efabdef6100ab5f9ff194891b607 259 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 24 258 38.51 T 13-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 VEA_001927 3bc0efabdef6100ab5f9ff194891b607 259 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 166 180 - T 13-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 VEA_001927 3bc0efabdef6100ab5f9ff194891b607 259 Pfam PF01209 ubiE/COQ5 methyltransferase family 26 258 1.7E-102 T 13-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 VEA_001927 3bc0efabdef6100ab5f9ff194891b607 259 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 33 258 5.4E-83 T 13-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 VEA_001927 3bc0efabdef6100ab5f9ff194891b607 259 Gene3D G3DSA:3.40.50.150 39 259 3.0E-75 T 13-10-2018 VEA_001927 3bc0efabdef6100ab5f9ff194891b607 259 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 44 59 - T 13-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 VEA_001927 3bc0efabdef6100ab5f9ff194891b607 259 SUPERFAMILY SSF53335 27 257 5.42E-53 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_000732 93e8ea61df1546f60df8159e8100f462 182 Pfam PF10135 Rod binding protein 54 104 1.8E-11 T 13-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal VEA_001710 653b54ae443bb11cd878e6f433e5cb58 192 Gene3D G3DSA:2.60.120.10 2 140 4.6E-21 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VEA_001710 653b54ae443bb11cd878e6f433e5cb58 192 SUPERFAMILY SSF51206 18 139 4.06E-21 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like VEA_001710 653b54ae443bb11cd878e6f433e5cb58 192 Pfam PF00027 Cyclic nucleotide-binding domain 30 112 6.2E-9 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain VEA_000198 f81ac2ead27de8fe2e8d7f44eb73b06b 262 Pfam PF00563 EAL domain 27 249 1.4E-42 T 13-10-2018 IPR001633 EAL domain VEA_000198 f81ac2ead27de8fe2e8d7f44eb73b06b 262 SMART SM00052 16 255 1.5E-11 T 13-10-2018 IPR001633 EAL domain VEA_000198 f81ac2ead27de8fe2e8d7f44eb73b06b 262 Gene3D G3DSA:3.20.20.450 20 252 1.2E-42 T 13-10-2018 IPR035919 EAL domain superfamily VEA_000198 f81ac2ead27de8fe2e8d7f44eb73b06b 262 SUPERFAMILY SSF141868 28 257 3.27E-41 T 13-10-2018 IPR035919 EAL domain superfamily VEA_000941 9d644460bd9db5f90c59b1a90ca77029 382 Gene3D G3DSA:3.30.70.270 186 375 2.6E-49 T 13-10-2018 VEA_000941 9d644460bd9db5f90c59b1a90ca77029 382 SUPERFAMILY SSF55073 196 363 5.96E-40 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_000941 9d644460bd9db5f90c59b1a90ca77029 382 Pfam PF00990 Diguanylate cyclase, GGDEF domain 191 358 3.6E-40 T 13-10-2018 IPR000160 GGDEF domain VEA_000941 9d644460bd9db5f90c59b1a90ca77029 382 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 187 361 7.8E-41 T 13-10-2018 IPR000160 GGDEF domain VEA_000941 9d644460bd9db5f90c59b1a90ca77029 382 SMART SM00267 180 362 1.3E-45 T 13-10-2018 IPR000160 GGDEF domain VEA_004258 697454e04fad5200165902336d2967f4 621 Pfam PF02779 Transketolase, pyrimidine binding domain 318 478 5.5E-37 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VEA_004258 697454e04fad5200165902336d2967f4 621 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VEA_004258 697454e04fad5200165902336d2967f4 621 Gene3D G3DSA:3.40.50.920 495 621 7.1E-44 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VEA_004258 697454e04fad5200165902336d2967f4 621 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 619 2.7E-303 T 13-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VEA_004258 697454e04fad5200165902336d2967f4 621 SMART SM00861 319 483 5.3E-64 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VEA_004258 697454e04fad5200165902336d2967f4 621 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 620 45.943 T 13-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VEA_004258 697454e04fad5200165902336d2967f4 621 Pfam PF02780 Transketolase, C-terminal domain 495 611 2.8E-28 T 13-10-2018 IPR033248 Transketolase, C-terminal domain VEA_004258 697454e04fad5200165902336d2967f4 621 SUPERFAMILY SSF52922 492 619 2.62E-33 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VEA_004258 697454e04fad5200165902336d2967f4 621 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 282 9.5E-119 T 13-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VEA_004258 697454e04fad5200165902336d2967f4 621 Gene3D G3DSA:3.40.50.970 317 490 5.0E-65 T 13-10-2018 VEA_004258 697454e04fad5200165902336d2967f4 621 SUPERFAMILY SSF52518 317 504 7.5E-58 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VEA_004258 697454e04fad5200165902336d2967f4 621 SUPERFAMILY SSF52518 9 381 2.55E-76 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VEA_004258 697454e04fad5200165902336d2967f4 621 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 13-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VEA_002907 75b48eb5c0c04ea96702c140f7435a5a 294 Pfam PF01263 Aldose 1-epimerase 27 291 4.0E-52 T 13-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 VEA_002907 75b48eb5c0c04ea96702c140f7435a5a 294 PIRSF PIRSF016020 3 294 4.1E-67 T 13-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 VEA_002907 75b48eb5c0c04ea96702c140f7435a5a 294 Gene3D G3DSA:2.70.98.10 2 294 8.3E-88 T 13-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 VEA_002907 75b48eb5c0c04ea96702c140f7435a5a 294 SUPERFAMILY SSF74650 7 289 3.77E-76 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VEA_001712 0b8a7b6f907d719d6be0533812adafb6 171 SUPERFAMILY SSF55729 19 168 6.85E-35 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_001712 0b8a7b6f907d719d6be0533812adafb6 171 Gene3D G3DSA:3.40.630.30 19 167 3.0E-42 T 13-10-2018 VEA_001712 0b8a7b6f907d719d6be0533812adafb6 171 Pfam PF13673 Acetyltransferase (GNAT) domain 65 167 1.4E-16 T 13-10-2018 IPR000182 GNAT domain VEA_003330 7d66c1eb71469434711416b55bb301aa 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 13-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VEA_003330 7d66c1eb71469434711416b55bb301aa 506 Gene3D G3DSA:3.40.605.10 23 492 1.9E-165 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VEA_003330 7d66c1eb71469434711416b55bb301aa 506 Gene3D G3DSA:3.40.309.10 266 464 1.9E-165 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VEA_003330 7d66c1eb71469434711416b55bb301aa 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VEA_003330 7d66c1eb71469434711416b55bb301aa 506 Pfam PF00171 Aldehyde dehydrogenase family 27 493 5.5E-166 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VEA_003330 7d66c1eb71469434711416b55bb301aa 506 SUPERFAMILY SSF53720 13 497 2.62E-162 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VEA_002372 9275ec8b139036f1c3a30dc08bdadb43 407 Gene3D G3DSA:1.20.81.30 59 176 1.3E-31 T 13-10-2018 VEA_002372 9275ec8b139036f1c3a30dc08bdadb43 407 Pfam PF00482 Type II secretion system (T2SS), protein F 274 396 1.3E-26 T 13-10-2018 IPR018076 Type II secretion system F domain VEA_002372 9275ec8b139036f1c3a30dc08bdadb43 407 Pfam PF00482 Type II secretion system (T2SS), protein F 71 194 1.4E-30 T 13-10-2018 IPR018076 Type II secretion system F domain VEA_002372 9275ec8b139036f1c3a30dc08bdadb43 407 Gene3D G3DSA:1.20.81.30 257 370 1.7E-28 T 13-10-2018 VEA_002372 9275ec8b139036f1c3a30dc08bdadb43 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 4.4E-9 T 13-10-2018 IPR003004 GspF/PilC family VEA_002372 9275ec8b139036f1c3a30dc08bdadb43 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 4.4E-9 T 13-10-2018 IPR003004 GspF/PilC family VEA_002372 9275ec8b139036f1c3a30dc08bdadb43 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 4.4E-9 T 13-10-2018 IPR003004 GspF/PilC family VEA_002372 9275ec8b139036f1c3a30dc08bdadb43 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 4.4E-9 T 13-10-2018 IPR003004 GspF/PilC family VEA_000714 28b8c5f2fbd968318b3bd1da0b080aa2 470 Gene3D G3DSA:3.20.20.70 144 453 2.0E-144 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_000714 28b8c5f2fbd968318b3bd1da0b080aa2 470 Gene3D G3DSA:2.30.170.30 3 56 4.6E-21 T 13-10-2018 VEA_000714 28b8c5f2fbd968318b3bd1da0b080aa2 470 Gene3D G3DSA:1.10.220.70 57 143 1.6E-35 T 13-10-2018 VEA_000714 28b8c5f2fbd968318b3bd1da0b080aa2 470 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 14 443 6.9E-220 T 13-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 VEA_000714 28b8c5f2fbd968318b3bd1da0b080aa2 470 PIRSF PIRSF018788 3 460 6.2E-234 T 13-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 VEA_001854 c5c6cac84b5d4bbb07805a21a83b762e 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 132 338 1.2E-34 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_001854 c5c6cac84b5d4bbb07805a21a83b762e 341 SUPERFAMILY SSF161098 107 321 3.01E-16 T 13-10-2018 IPR035906 MetI-like superfamily VEA_001854 c5c6cac84b5d4bbb07805a21a83b762e 341 Gene3D G3DSA:1.10.3720.10 102 332 1.1E-18 T 13-10-2018 IPR035906 MetI-like superfamily VEA_000471 0f0c3192007fef042ace855f2d17d097 347 SUPERFAMILY SSF51412 6 336 2.75E-98 T 13-10-2018 VEA_000471 0f0c3192007fef042ace855f2d17d097 347 SMART SM01240 7 344 1.0E-137 T 13-10-2018 VEA_000471 0f0c3192007fef042ace855f2d17d097 347 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 4.4E-185 T 13-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 VEA_000471 0f0c3192007fef042ace855f2d17d097 347 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 13-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 VEA_000471 0f0c3192007fef042ace855f2d17d097 347 Gene3D G3DSA:3.20.20.70 1 345 2.2E-117 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_000471 0f0c3192007fef042ace855f2d17d097 347 Hamap MF_00596 GMP reductase [guaC]. 1 345 50.067 T 13-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 VEA_000471 0f0c3192007fef042ace855f2d17d097 347 PIRSF PIRSF000235 1 347 1.3E-195 T 13-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 VEA_000471 0f0c3192007fef042ace855f2d17d097 347 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 338 2.6E-79 T 13-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 VEA_001185 ea37525bcdb16ab5524ff356904981c5 118 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 48 64 4.0E-10 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VEA_001185 ea37525bcdb16ab5524ff356904981c5 118 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 82 98 4.0E-10 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VEA_001185 ea37525bcdb16ab5524ff356904981c5 118 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 103 116 4.0E-10 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VEA_001185 ea37525bcdb16ab5524ff356904981c5 118 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 12 117 4.4E-14 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VEA_001185 ea37525bcdb16ab5524ff356904981c5 118 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 17 118 15.269 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VEA_001185 ea37525bcdb16ab5524ff356904981c5 118 Pfam PF02049 Flagellar hook-basal body complex protein FliE 40 118 8.8E-24 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VEA_003438 5b7d94b099ff1e822f38434b21911a4d 706 Gene3D G3DSA:3.30.750.80 396 487 4.4E-35 T 13-10-2018 VEA_003438 5b7d94b099ff1e822f38434b21911a4d 706 Gene3D G3DSA:3.30.2130.30 6 255 7.1E-136 T 13-10-2018 VEA_003438 5b7d94b099ff1e822f38434b21911a4d 706 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 302 314 7.8E-5 T 13-10-2018 VEA_003438 5b7d94b099ff1e822f38434b21911a4d 706 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 193 207 7.8E-5 T 13-10-2018 VEA_003438 5b7d94b099ff1e822f38434b21911a4d 706 SMART SM00981 56 154 2.0E-19 T 13-10-2018 IPR004114 THUMP domain GO:0003723 VEA_003438 5b7d94b099ff1e822f38434b21911a4d 706 Gene3D G3DSA:3.40.50.150 169 371 7.1E-136 T 13-10-2018 VEA_003438 5b7d94b099ff1e822f38434b21911a4d 706 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 13-10-2018 IPR000241 Putative RNA methylase domain VEA_003438 5b7d94b099ff1e822f38434b21911a4d 706 SUPERFAMILY SSF53335 399 705 8.22E-69 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_003438 5b7d94b099ff1e822f38434b21911a4d 706 PIRSF PIRSF037618 1 706 4.1E-295 T 13-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 VEA_003438 5b7d94b099ff1e822f38434b21911a4d 706 SUPERFAMILY SSF53335 139 371 1.31E-42 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_003438 5b7d94b099ff1e822f38434b21911a4d 706 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 436 661 7.1E-27 T 13-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 VEA_003438 5b7d94b099ff1e822f38434b21911a4d 706 Pfam PF01170 Putative RNA methylase family UPF0020 162 374 1.8E-61 T 13-10-2018 IPR000241 Putative RNA methylase domain VEA_003438 5b7d94b099ff1e822f38434b21911a4d 706 Gene3D G3DSA:3.40.50.150 488 706 1.7E-73 T 13-10-2018 VEA_003438 5b7d94b099ff1e822f38434b21911a4d 706 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 305 311 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VEA_003438 5b7d94b099ff1e822f38434b21911a4d 706 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 706 31.458 T 13-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 VEA_003438 5b7d94b099ff1e822f38434b21911a4d 706 Pfam PF02926 THUMP domain 30 153 1.7E-12 T 13-10-2018 IPR004114 THUMP domain GO:0003723 VEA_003376 7fd7c2e62db63eb2e940db9f82ff4ec6 161 Pfam PF07720 Tetratricopeptide repeat 39 70 2.9E-7 T 13-10-2018 IPR011716 Tetratricopeptide TPR-3 VEA_003376 7fd7c2e62db63eb2e940db9f82ff4ec6 161 Pfam PF07720 Tetratricopeptide repeat 77 98 0.11 T 13-10-2018 IPR011716 Tetratricopeptide TPR-3 VEA_003376 7fd7c2e62db63eb2e940db9f82ff4ec6 161 Gene3D G3DSA:1.25.40.10 14 161 4.4E-53 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_003376 7fd7c2e62db63eb2e940db9f82ff4ec6 161 SUPERFAMILY SSF48452 27 145 2.96E-13 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_003376 7fd7c2e62db63eb2e940db9f82ff4ec6 161 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 24 47 1.2E-33 T 13-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD VEA_003376 7fd7c2e62db63eb2e940db9f82ff4ec6 161 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 49 68 1.2E-33 T 13-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD VEA_003376 7fd7c2e62db63eb2e940db9f82ff4ec6 161 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 73 95 1.2E-33 T 13-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD VEA_003376 7fd7c2e62db63eb2e940db9f82ff4ec6 161 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 105 127 1.2E-33 T 13-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD VEA_003376 7fd7c2e62db63eb2e940db9f82ff4ec6 161 TIGRFAM TIGR02552 LcrH_SycD: type III secretion low calcium response chaperone LcrH/SycD 21 155 2.0E-44 T 13-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD VEA_003376 7fd7c2e62db63eb2e940db9f82ff4ec6 161 PIRSF PIRSF003165 1 161 1.3E-58 T 13-10-2018 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup VEA_001296 de32c28695fdeed0d1a02f0a904605a2 116 SUPERFAMILY SSF51182 2 109 2.73E-15 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily VEA_001296 de32c28695fdeed0d1a02f0a904605a2 116 Pfam PF06249 Ethanolamine utilisation protein EutQ 4 111 3.4E-15 T 13-10-2018 IPR010424 Ethanolamine utilisation EutQ VEA_001296 de32c28695fdeed0d1a02f0a904605a2 116 Gene3D G3DSA:2.60.120.10 1 114 4.2E-27 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VEA_001606 4d3097e7b1e6e09d641089f0ee85c458 193 SMART SM01012 131 186 7.7E-19 T 13-10-2018 IPR005561 ANTAR domain GO:0003723 VEA_001606 4d3097e7b1e6e09d641089f0ee85c458 193 Gene3D G3DSA:1.10.10.10 133 192 1.9E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001606 4d3097e7b1e6e09d641089f0ee85c458 193 Pfam PF03861 ANTAR domain 134 186 4.1E-17 T 13-10-2018 IPR005561 ANTAR domain GO:0003723 VEA_001606 4d3097e7b1e6e09d641089f0ee85c458 193 SUPERFAMILY SSF52172 2 186 8.95E-25 T 13-10-2018 IPR011006 CheY-like superfamily VEA_003452 64714642f318886d8ea37bdcec56b5ba 353 Gene3D G3DSA:3.55.50.30 1 61 9.8E-6 T 13-10-2018 VEA_003452 64714642f318886d8ea37bdcec56b5ba 353 PRINTS PR00811 Bacterial general secretion pathway protein D signature 135 145 3.8E-21 T 13-10-2018 IPR001775 GspD/PilQ family VEA_003452 64714642f318886d8ea37bdcec56b5ba 353 PRINTS PR00811 Bacterial general secretion pathway protein D signature 225 235 3.8E-21 T 13-10-2018 IPR001775 GspD/PilQ family VEA_003452 64714642f318886d8ea37bdcec56b5ba 353 PRINTS PR00811 Bacterial general secretion pathway protein D signature 341 353 3.8E-21 T 13-10-2018 IPR001775 GspD/PilQ family VEA_003452 64714642f318886d8ea37bdcec56b5ba 353 PRINTS PR00811 Bacterial general secretion pathway protein D signature 190 214 3.8E-21 T 13-10-2018 IPR001775 GspD/PilQ family VEA_003452 64714642f318886d8ea37bdcec56b5ba 353 PRINTS PR00811 Bacterial general secretion pathway protein D signature 318 336 3.8E-21 T 13-10-2018 IPR001775 GspD/PilQ family VEA_003452 64714642f318886d8ea37bdcec56b5ba 353 Gene3D G3DSA:3.30.1370.120 62 133 3.9E-7 T 13-10-2018 IPR038591 NolW-like superfamily VEA_003452 64714642f318886d8ea37bdcec56b5ba 353 PRINTS PR01032 Gene IV protein signature 215 238 4.3E-19 T 13-10-2018 VEA_003452 64714642f318886d8ea37bdcec56b5ba 353 PRINTS PR01032 Gene IV protein signature 281 309 4.3E-19 T 13-10-2018 VEA_003452 64714642f318886d8ea37bdcec56b5ba 353 PRINTS PR01032 Gene IV protein signature 334 353 4.3E-19 T 13-10-2018 VEA_003452 64714642f318886d8ea37bdcec56b5ba 353 Pfam PF03958 Bacterial type II/III secretion system short domain 68 135 5.1E-8 T 13-10-2018 IPR005644 NolW-like VEA_003452 64714642f318886d8ea37bdcec56b5ba 353 Pfam PF00263 Bacterial type II and III secretion system protein 194 353 1.1E-37 T 13-10-2018 IPR004846 Type II/III secretion system GO:0009306 VEA_000582 8717051d2c239d2fd45d0edaba8b10e4 118 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 70 81 - T 13-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VEA_000582 8717051d2c239d2fd45d0edaba8b10e4 118 Pfam PF01219 Prokaryotic diacylglycerol kinase 16 115 3.2E-36 T 13-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VEA_000582 8717051d2c239d2fd45d0edaba8b10e4 118 Gene3D G3DSA:1.10.3830.10 3 118 1.3E-40 T 13-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VEA_000937 6894269b5bd92febcddee85addaada8b 206 Gene3D G3DSA:3.40.30.10 1 205 7.4E-43 T 13-10-2018 VEA_000937 6894269b5bd92febcddee85addaada8b 206 Pfam PF01323 DSBA-like thioredoxin domain 3 182 8.1E-10 T 13-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 VEA_000937 6894269b5bd92febcddee85addaada8b 206 SUPERFAMILY SSF52833 3 203 4.13E-27 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VEA_002309 4cf93ac04495568eca1b69696611cc25 179 Pfam PF10400 Virulence activator alpha C-term 92 176 6.0E-15 T 13-10-2018 IPR018309 Transcription regulator PadR, C-terminal VEA_002309 4cf93ac04495568eca1b69696611cc25 179 Gene3D G3DSA:1.10.10.10 1 89 6.4E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_002309 4cf93ac04495568eca1b69696611cc25 179 SUPERFAMILY SSF46785 3 176 1.04E-43 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_002309 4cf93ac04495568eca1b69696611cc25 179 Pfam PF03551 Transcriptional regulator PadR-like family 7 80 1.1E-15 T 13-10-2018 IPR005149 Transcription regulator PadR, N-terminal VEA_003792 4b7cbe1f23dbfa7ffa4f840d86f2e8c3 148 Gene3D G3DSA:2.40.128.270 40 143 5.2E-30 T 13-10-2018 IPR038670 HslJ-like superfamily VEA_003792 4b7cbe1f23dbfa7ffa4f840d86f2e8c3 148 Pfam PF03724 META domain 34 140 1.8E-27 T 13-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ VEA_002808 6fbb7669f1132f595534b78d65192abb 663 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 107 5.5E-21 T 13-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 VEA_002808 6fbb7669f1132f595534b78d65192abb 663 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 428 652 1.1E-55 T 13-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 VEA_002808 6fbb7669f1132f595534b78d65192abb 663 Pfam PF07196 Flagellin hook IN motif 125 177 2.8E-7 T 13-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VEA_000760 d67591627072524828dc477abc45f94b 302 Pfam PF04393 Protein of unknown function (DUF535) 27 297 1.4E-82 T 13-10-2018 IPR007488 Protein of unknown function DUF535 VEA_003957 f52a3c43ea5dbd8ee350a178675cc205 67 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 1 63 1.5E-24 T 13-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 VEA_003957 f52a3c43ea5dbd8ee350a178675cc205 67 SUPERFAMILY SSF54736 1 66 9.94E-23 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VEA_003957 f52a3c43ea5dbd8ee350a178675cc205 67 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 1 62 16.199 T 13-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS VEA_003957 f52a3c43ea5dbd8ee350a178675cc205 67 Gene3D G3DSA:3.30.1390.10 1 67 4.0E-30 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VEA_001260 77680adcde31e324f1a890e37390585e 190 Pfam PF07603 Protein of unknown function (DUF1566) 42 186 2.8E-22 T 13-10-2018 IPR011460 Protein of unknown function DUF1566 VEA_003153 182c4ed127b88d625e23439b4873d6c8 155 Pfam PF00583 Acetyltransferase (GNAT) family 17 133 1.5E-8 T 13-10-2018 IPR000182 GNAT domain VEA_003153 182c4ed127b88d625e23439b4873d6c8 155 SUPERFAMILY SSF55729 2 140 3.9E-14 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_003153 182c4ed127b88d625e23439b4873d6c8 155 Gene3D G3DSA:3.40.630.30 2 152 5.9E-15 T 13-10-2018 VEA_000901 4a52b4f3c0534ca9e0da529bb0ba49e5 496 Pfam PF07690 Major Facilitator Superfamily 17 408 2.1E-56 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEA_000901 4a52b4f3c0534ca9e0da529bb0ba49e5 496 SUPERFAMILY SSF103473 10 493 4.19E-60 T 13-10-2018 IPR036259 MFS transporter superfamily VEA_000901 4a52b4f3c0534ca9e0da529bb0ba49e5 496 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 13 491 3.0E-109 T 13-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 VEA_000901 4a52b4f3c0534ca9e0da529bb0ba49e5 496 Gene3D G3DSA:1.20.1250.20 264 496 1.2E-13 T 13-10-2018 VEA_000901 4a52b4f3c0534ca9e0da529bb0ba49e5 496 Gene3D G3DSA:1.20.1720.10 14 207 1.4E-45 T 13-10-2018 VEA_003322 ee9878ede0f2a714ad8aa5e9d3ce7890 310 SMART SM00342 28 111 1.3E-24 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_003322 ee9878ede0f2a714ad8aa5e9d3ce7890 310 Gene3D G3DSA:3.20.80.10 139 306 3.7E-30 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VEA_003322 ee9878ede0f2a714ad8aa5e9d3ce7890 310 SUPERFAMILY SSF55136 140 303 1.13E-19 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VEA_003322 ee9878ede0f2a714ad8aa5e9d3ce7890 310 Pfam PF12833 Helix-turn-helix domain 35 112 1.3E-21 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_003322 ee9878ede0f2a714ad8aa5e9d3ce7890 310 SUPERFAMILY SSF46689 65 115 4.48E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_003322 ee9878ede0f2a714ad8aa5e9d3ce7890 310 Gene3D G3DSA:1.10.10.60 3 65 1.2E-19 T 13-10-2018 VEA_003322 ee9878ede0f2a714ad8aa5e9d3ce7890 310 SUPERFAMILY SSF46689 11 62 7.17E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_003322 ee9878ede0f2a714ad8aa5e9d3ce7890 310 SMART SM00871 139 302 7.9E-17 T 13-10-2018 IPR010499 Bacterial transcription activator, effector binding VEA_003322 ee9878ede0f2a714ad8aa5e9d3ce7890 310 Gene3D G3DSA:1.10.10.60 66 126 1.5E-13 T 13-10-2018 VEA_003322 ee9878ede0f2a714ad8aa5e9d3ce7890 310 Pfam PF14526 Integron-associated effector binding protein 142 301 7.8E-18 T 13-10-2018 IPR029441 Integron-associated effector binding protein VEA_001534 f7e98007f7fe62aebaf4a97062321938 453 Gene3D G3DSA:3.30.1330.120 253 382 1.2E-74 T 13-10-2018 VEA_001534 f7e98007f7fe62aebaf4a97062321938 453 Pfam PF03972 MmgE/PrpD family 3 420 2.0E-82 T 13-10-2018 IPR005656 MmgE/PrpD GO:0016829 VEA_001534 f7e98007f7fe62aebaf4a97062321938 453 SUPERFAMILY SSF103378 3 435 2.48E-97 T 13-10-2018 IPR036148 MmgE/PrpD superfamily GO:0016829 VEA_001534 f7e98007f7fe62aebaf4a97062321938 453 Gene3D G3DSA:1.10.4100.10 21 399 1.2E-74 T 13-10-2018 VEA_003800 b41aa86dc51a6fb9e224b9ad350406e2 351 Gene3D G3DSA:3.10.20.30 265 351 4.0E-21 T 13-10-2018 IPR012675 Beta-grasp domain superfamily VEA_003800 b41aa86dc51a6fb9e224b9ad350406e2 351 SUPERFAMILY SSF63380 4 110 2.94E-27 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VEA_003800 b41aa86dc51a6fb9e224b9ad350406e2 351 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 275 341 2.1E-11 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VEA_003800 b41aa86dc51a6fb9e224b9ad350406e2 351 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 300 308 - T 13-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VEA_003800 b41aa86dc51a6fb9e224b9ad350406e2 351 PRINTS PR00410 Phenol hydroxylase reductase family signature 125 144 1.2E-5 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VEA_003800 b41aa86dc51a6fb9e224b9ad350406e2 351 PRINTS PR00410 Phenol hydroxylase reductase family signature 41 53 1.2E-5 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VEA_003800 b41aa86dc51a6fb9e224b9ad350406e2 351 PRINTS PR00410 Phenol hydroxylase reductase family signature 219 227 1.2E-5 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VEA_003800 b41aa86dc51a6fb9e224b9ad350406e2 351 SUPERFAMILY SSF52343 118 253 1.57E-31 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VEA_003800 b41aa86dc51a6fb9e224b9ad350406e2 351 Pfam PF00970 Oxidoreductase FAD-binding domain 17 108 2.2E-16 T 13-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VEA_003800 b41aa86dc51a6fb9e224b9ad350406e2 351 Gene3D G3DSA:3.40.50.80 115 258 3.0E-30 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VEA_003800 b41aa86dc51a6fb9e224b9ad350406e2 351 SUPERFAMILY SSF54292 242 350 1.7E-23 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VEA_003800 b41aa86dc51a6fb9e224b9ad350406e2 351 Pfam PF00175 Oxidoreductase NAD-binding domain 126 233 3.7E-13 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VEA_003800 b41aa86dc51a6fb9e224b9ad350406e2 351 Gene3D G3DSA:2.40.30.10 5 109 2.4E-24 T 13-10-2018 VEA_001281 a0d7969091b5f8de2dd7f13328b25c38 655 Gene3D G3DSA:1.10.3470.10 3 328 1.8E-60 T 13-10-2018 IPR037294 ABC transporter, BtuC-like VEA_001281 a0d7969091b5f8de2dd7f13328b25c38 655 SUPERFAMILY SSF81345 9 323 1.31E-55 T 13-10-2018 IPR037294 ABC transporter, BtuC-like VEA_001281 a0d7969091b5f8de2dd7f13328b25c38 655 Pfam PF01032 FecCD transport family 12 323 1.2E-61 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VEA_001281 a0d7969091b5f8de2dd7f13328b25c38 655 Pfam PF01032 FecCD transport family 373 651 1.4E-66 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VEA_001281 a0d7969091b5f8de2dd7f13328b25c38 655 SUPERFAMILY SSF81345 349 651 1.44E-61 T 13-10-2018 IPR037294 ABC transporter, BtuC-like VEA_001281 a0d7969091b5f8de2dd7f13328b25c38 655 Gene3D G3DSA:1.10.3470.10 334 653 2.2E-69 T 13-10-2018 IPR037294 ABC transporter, BtuC-like VEA_003818 f42e2cf6199c88bf86643a4d299a5f7f 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 293 3.0E-20 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_003818 f42e2cf6199c88bf86643a4d299a5f7f 295 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 65 2.1E-13 T 13-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VEA_003818 f42e2cf6199c88bf86643a4d299a5f7f 295 Gene3D G3DSA:1.10.3720.10 85 291 3.3E-17 T 13-10-2018 IPR035906 MetI-like superfamily VEA_003818 f42e2cf6199c88bf86643a4d299a5f7f 295 SUPERFAMILY SSF161098 89 276 1.96E-21 T 13-10-2018 IPR035906 MetI-like superfamily VEA_002290 d2415ea40ef245a1bfcbf468d1c72765 75 Pfam PF04102 SlyX 9 75 9.1E-24 T 13-10-2018 IPR007236 SlyX VEA_002290 d2415ea40ef245a1bfcbf468d1c72765 75 Hamap MF_00715 Protein SlyX [slyX]. 8 75 17.417 T 13-10-2018 IPR007236 SlyX VEA_002290 d2415ea40ef245a1bfcbf468d1c72765 75 Gene3D G3DSA:1.20.5.300 2 51 5.5E-7 T 13-10-2018 VEA_002090 9f09f37b25a2caafc5aa271c0c356818 265 Gene3D G3DSA:1.10.10.60 166 226 4.2E-14 T 13-10-2018 VEA_002090 9f09f37b25a2caafc5aa271c0c356818 265 Pfam PF12833 Helix-turn-helix domain 192 264 1.1E-20 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_002090 9f09f37b25a2caafc5aa271c0c356818 265 SUPERFAMILY SSF51215 23 133 2.75E-19 T 13-10-2018 IPR037923 Transcription regulator HTH-like VEA_002090 9f09f37b25a2caafc5aa271c0c356818 265 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 233 248 2.3E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEA_002090 9f09f37b25a2caafc5aa271c0c356818 265 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 248 264 2.3E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEA_002090 9f09f37b25a2caafc5aa271c0c356818 265 SMART SM00342 182 264 2.5E-23 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_002090 9f09f37b25a2caafc5aa271c0c356818 265 Gene3D G3DSA:1.10.10.60 227 265 9.8E-11 T 13-10-2018 VEA_002090 9f09f37b25a2caafc5aa271c0c356818 265 SUPERFAMILY SSF46689 167 215 1.61E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_002090 9f09f37b25a2caafc5aa271c0c356818 265 SUPERFAMILY SSF46689 218 264 2.02E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_002090 9f09f37b25a2caafc5aa271c0c356818 265 Pfam PF02311 AraC-like ligand binding domain 15 133 6.0E-20 T 13-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VEA_000947 cde8599b2b0f9ff693835b7aae93f7ba 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 53 2.4E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEA_000947 cde8599b2b0f9ff693835b7aae93f7ba 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 5.5E-5 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEA_000947 cde8599b2b0f9ff693835b7aae93f7ba 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 5.5E-5 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEA_000947 cde8599b2b0f9ff693835b7aae93f7ba 196 Gene3D G3DSA:1.10.357.10 49 193 1.1E-21 T 13-10-2018 VEA_000947 cde8599b2b0f9ff693835b7aae93f7ba 196 SUPERFAMILY SSF48498 81 192 2.52E-19 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VEA_000947 cde8599b2b0f9ff693835b7aae93f7ba 196 SUPERFAMILY SSF46689 3 72 8.74E-14 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_000947 cde8599b2b0f9ff693835b7aae93f7ba 196 Gene3D G3DSA:1.10.10.60 1 47 1.6E-20 T 13-10-2018 VEA_001191 7abcb753b8595e285bc6058c635f5521 379 Gene3D G3DSA:2.40.10.10 28 282 6.3E-54 T 13-10-2018 VEA_001191 7abcb753b8595e285bc6058c635f5521 379 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 225 236 - T 13-10-2018 IPR033116 Serine proteases, trypsin family, serine active site VEA_001191 7abcb753b8595e285bc6058c635f5521 379 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 78 83 - T 13-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 VEA_001191 7abcb753b8595e285bc6058c635f5521 379 Pfam PF00089 Trypsin 36 276 1.8E-41 T 13-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VEA_001191 7abcb753b8595e285bc6058c635f5521 379 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 68 83 2.1E-12 T 13-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VEA_001191 7abcb753b8595e285bc6058c635f5521 379 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 224 236 2.1E-12 T 13-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VEA_001191 7abcb753b8595e285bc6058c635f5521 379 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 132 146 2.1E-12 T 13-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VEA_001191 7abcb753b8595e285bc6058c635f5521 379 SMART SM00020 35 276 8.4E-49 T 13-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VEA_001191 7abcb753b8595e285bc6058c635f5521 379 SUPERFAMILY SSF50494 7 281 2.88E-59 T 13-10-2018 IPR009003 Peptidase S1, PA clan VEA_002906 33e9fecaa9ff6fff10d8a640bde7bfa1 678 Gene3D G3DSA:3.30.450.20 182 328 1.8E-12 T 13-10-2018 VEA_002906 33e9fecaa9ff6fff10d8a640bde7bfa1 678 SMART SM00283 417 678 6.9E-68 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_002906 33e9fecaa9ff6fff10d8a640bde7bfa1 678 SUPERFAMILY SSF58104 378 677 5.23E-63 T 13-10-2018 VEA_002906 33e9fecaa9ff6fff10d8a640bde7bfa1 678 SMART SM00304 347 402 0.0024 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_002906 33e9fecaa9ff6fff10d8a640bde7bfa1 678 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 489 644 9.1E-42 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_002906 33e9fecaa9ff6fff10d8a640bde7bfa1 678 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 544 573 1.8E-21 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEA_002906 33e9fecaa9ff6fff10d8a640bde7bfa1 678 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 515 542 1.8E-21 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEA_002906 33e9fecaa9ff6fff10d8a640bde7bfa1 678 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 438 467 1.8E-21 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VEA_002906 33e9fecaa9ff6fff10d8a640bde7bfa1 678 Gene3D G3DSA:1.10.287.950 348 678 7.7E-66 T 13-10-2018 VEA_002906 33e9fecaa9ff6fff10d8a640bde7bfa1 678 Pfam PF17201 Cache 3/Cache 2 fusion domain 39 324 1.4E-65 T 13-10-2018 IPR033462 Cache 3/Cache 2 fusion domain VEA_002906 33e9fecaa9ff6fff10d8a640bde7bfa1 678 SUPERFAMILY SSF103190 115 212 4.71E-12 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VEA_002413 ecc6862d313d77fd4ededc8d1009b4be 106 Gene3D G3DSA:3.30.750.24 9 102 1.9E-12 T 13-10-2018 IPR036513 STAS domain superfamily VEA_002413 ecc6862d313d77fd4ededc8d1009b4be 106 Pfam PF13466 STAS domain 15 93 3.1E-19 T 13-10-2018 IPR002645 STAS domain VEA_002413 ecc6862d313d77fd4ededc8d1009b4be 106 SUPERFAMILY SSF52091 12 97 3.53E-14 T 13-10-2018 IPR036513 STAS domain superfamily VEA_000973 28f4f118ca28662fcf28071728a21113 221 Pfam PF10026 Predicted Zn-dependent protease (DUF2268) 51 220 4.3E-39 T 13-10-2018 IPR018728 Domain of unknown function DUF2268 VEA_001035 269adb32210d91f90495ad065e9b1f6d 271 SMART SM00342 182 264 4.2E-22 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_001035 269adb32210d91f90495ad065e9b1f6d 271 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 219 260 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VEA_001035 269adb32210d91f90495ad065e9b1f6d 271 Gene3D G3DSA:1.10.10.60 164 267 3.4E-19 T 13-10-2018 VEA_001035 269adb32210d91f90495ad065e9b1f6d 271 Gene3D G3DSA:2.60.120.10 8 103 1.2E-6 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VEA_001035 269adb32210d91f90495ad065e9b1f6d 271 SUPERFAMILY SSF51182 25 191 5.43E-14 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily VEA_001035 269adb32210d91f90495ad065e9b1f6d 271 Pfam PF12833 Helix-turn-helix domain 190 264 7.3E-18 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_001035 269adb32210d91f90495ad065e9b1f6d 271 SUPERFAMILY SSF46689 219 266 2.2E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_001135 3f0223d0d68792857eae5f8b47b86e2e 96 Gene3D G3DSA:3.30.70.100 1 89 2.5E-26 T 13-10-2018 VEA_001135 3f0223d0d68792857eae5f8b47b86e2e 96 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 4.3E-19 T 13-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain VEA_001135 3f0223d0d68792857eae5f8b47b86e2e 96 SUPERFAMILY SSF54909 1 80 1.22E-25 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel VEA_002195 34b0cdc997945c65516b01ba45d4620e 295 Gene3D G3DSA:3.40.50.150 102 294 8.7E-56 T 13-10-2018 VEA_002195 34b0cdc997945c65516b01ba45d4620e 295 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 293 2.1E-105 T 13-10-2018 VEA_002195 34b0cdc997945c65516b01ba45d4620e 295 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 293 33.697 T 13-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 VEA_002195 34b0cdc997945c65516b01ba45d4620e 295 PIRSF PIRSF000401 1 295 3.4E-100 T 13-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 VEA_002195 34b0cdc997945c65516b01ba45d4620e 295 SUPERFAMILY SSF53335 44 274 6.22E-45 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_002195 34b0cdc997945c65516b01ba45d4620e 295 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 287 1.1E-109 T 13-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 VEA_002488 8b66135a4ef83e9e265add3dac6d221c 322 Gene3D G3DSA:2.40.30.160 190 311 3.7E-34 T 13-10-2018 VEA_002488 8b66135a4ef83e9e265add3dac6d221c 322 Gene3D G3DSA:3.30.70.1630 26 187 1.3E-39 T 13-10-2018 VEA_002488 8b66135a4ef83e9e265add3dac6d221c 322 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 316 43.525 T 13-10-2018 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 VEA_002488 8b66135a4ef83e9e265add3dac6d221c 322 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 181 245 1.3E-25 T 13-10-2018 IPR017703 YgfZ/GcvT conserved site VEA_002488 8b66135a4ef83e9e265add3dac6d221c 322 Pfam PF01571 Aminomethyltransferase folate-binding domain 29 137 9.7E-7 T 13-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain VEA_002488 8b66135a4ef83e9e265add3dac6d221c 322 Gene3D G3DSA:3.30.70.1400 29 115 1.3E-39 T 13-10-2018 VEA_002488 8b66135a4ef83e9e265add3dac6d221c 322 SUPERFAMILY SSF103025 18 236 1.11E-54 T 13-10-2018 VEA_002488 8b66135a4ef83e9e265add3dac6d221c 322 PIRSF PIRSF006487 163 265 0.65 T 13-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 VEA_002488 8b66135a4ef83e9e265add3dac6d221c 322 PIRSF PIRSF006487 21 157 2.0E-5 T 13-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 VEA_002488 8b66135a4ef83e9e265add3dac6d221c 322 SUPERFAMILY SSF101790 237 320 9.15E-20 T 13-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal VEA_002673 a9d278666c821b46af55d8a8cff74655 502 Gene3D G3DSA:1.10.8.870 387 458 1.2E-13 T 13-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VEA_002673 a9d278666c821b46af55d8a8cff74655 502 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 4 21 - T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VEA_002673 a9d278666c821b46af55d8a8cff74655 502 Gene3D G3DSA:3.50.50.60 1 361 6.2E-141 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_002673 a9d278666c821b46af55d8a8cff74655 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 73 85 1.2E-21 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VEA_002673 a9d278666c821b46af55d8a8cff74655 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 12 22 1.2E-21 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VEA_002673 a9d278666c821b46af55d8a8cff74655 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 308 314 1.2E-21 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VEA_002673 a9d278666c821b46af55d8a8cff74655 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 28 40 1.2E-21 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VEA_002673 a9d278666c821b46af55d8a8cff74655 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 342 354 1.2E-21 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VEA_002673 a9d278666c821b46af55d8a8cff74655 502 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 376 481 5.0E-11 T 13-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VEA_002673 a9d278666c821b46af55d8a8cff74655 502 Pfam PF01266 FAD dependent oxidoreductase 2 318 7.1E-47 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VEA_002673 a9d278666c821b46af55d8a8cff74655 502 Gene3D G3DSA:3.30.9.10 77 315 6.2E-141 T 13-10-2018 VEA_002673 a9d278666c821b46af55d8a8cff74655 502 SUPERFAMILY SSF51905 2 369 1.94E-29 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_004060 7dd6d13547c2b3c3a6bea5a48dcb0911 355 Pfam PF00891 O-methyltransferase 113 338 2.8E-14 T 13-10-2018 IPR001077 O-methyltransferase, family 2 GO:0008171 VEA_004060 7dd6d13547c2b3c3a6bea5a48dcb0911 355 SUPERFAMILY SSF46785 19 99 1.87E-9 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_004060 7dd6d13547c2b3c3a6bea5a48dcb0911 355 Gene3D G3DSA:1.20.58.1390 101 315 1.7E-109 T 13-10-2018 VEA_004060 7dd6d13547c2b3c3a6bea5a48dcb0911 355 Gene3D G3DSA:1.10.10.10 2 98 2.1E-30 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_004060 7dd6d13547c2b3c3a6bea5a48dcb0911 355 Gene3D G3DSA:3.40.50.150 166 350 1.7E-109 T 13-10-2018 VEA_004060 7dd6d13547c2b3c3a6bea5a48dcb0911 355 SUPERFAMILY SSF53335 99 341 4.78E-36 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_004060 7dd6d13547c2b3c3a6bea5a48dcb0911 355 PIRSF PIRSF005739 3 348 1.1E-7 T 13-10-2018 IPR016461 O-methyltransferase COMT-type GO:0008168 VEA_001070 2d4983d96f54f60a89bc1cfd345fa90c 307 Pfam PF01032 FecCD transport family 6 304 3.3E-83 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VEA_001070 2d4983d96f54f60a89bc1cfd345fa90c 307 SUPERFAMILY SSF81345 24 304 2.35E-75 T 13-10-2018 IPR037294 ABC transporter, BtuC-like VEA_001070 2d4983d96f54f60a89bc1cfd345fa90c 307 Gene3D G3DSA:1.10.3470.10 1 307 4.6E-85 T 13-10-2018 IPR037294 ABC transporter, BtuC-like VEA_003908 001c12c4724051b486efd1d8740431eb 138 Pfam PF03994 Domain of Unknown Function (DUF350) 83 136 3.6E-14 T 13-10-2018 IPR007140 Protein of unknown function DUF350 VEA_003908 001c12c4724051b486efd1d8740431eb 138 Pfam PF03994 Domain of Unknown Function (DUF350) 17 70 2.2E-12 T 13-10-2018 IPR007140 Protein of unknown function DUF350 VEA_004412 e0a250988c1bb0dec3e53ef5cbbae271 494 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 328 437 6.8E-22 T 13-10-2018 IPR025299 CstA, C-terminal domain VEA_004412 e0a250988c1bb0dec3e53ef5cbbae271 494 Pfam PF02554 Carbon starvation protein CstA 156 293 7.1E-20 T 13-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 VEA_004412 e0a250988c1bb0dec3e53ef5cbbae271 494 Pfam PF02554 Carbon starvation protein CstA 4 144 6.4E-33 T 13-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 VEA_002876 47bf37540c4d7a917d7ad87bd083a1d6 420 PIRSF PIRSF001563 7 420 3.4E-104 T 13-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 VEA_002876 47bf37540c4d7a917d7ad87bd083a1d6 420 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 414 1.4E-103 T 13-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 VEA_002876 47bf37540c4d7a917d7ad87bd083a1d6 420 Gene3D G3DSA:3.90.190.20 288 419 1.6E-33 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VEA_002876 47bf37540c4d7a917d7ad87bd083a1d6 420 SUPERFAMILY SSF53244 288 416 4.88E-31 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VEA_002876 47bf37540c4d7a917d7ad87bd083a1d6 420 Gene3D G3DSA:3.40.1190.10 1 287 3.4E-92 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VEA_002876 47bf37540c4d7a917d7ad87bd083a1d6 420 Pfam PF08245 Mur ligase middle domain 54 192 6.4E-7 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VEA_002876 47bf37540c4d7a917d7ad87bd083a1d6 420 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 13-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 VEA_002876 47bf37540c4d7a917d7ad87bd083a1d6 420 SUPERFAMILY SSF53623 12 285 3.51E-85 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VEA_001313 14dc8c0f0995661deb972a0dad72cc2e 344 Pfam PF00107 Zinc-binding dehydrogenase 160 296 1.4E-21 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VEA_001313 14dc8c0f0995661deb972a0dad72cc2e 344 SUPERFAMILY SSF51735 126 305 1.37E-46 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_001313 14dc8c0f0995661deb972a0dad72cc2e 344 Pfam PF16884 N-terminal domain of oxidoreductase 7 114 4.1E-40 T 13-10-2018 VEA_001313 14dc8c0f0995661deb972a0dad72cc2e 344 SUPERFAMILY SSF50129 5 145 8.36E-42 T 13-10-2018 IPR011032 GroES-like superfamily VEA_001313 14dc8c0f0995661deb972a0dad72cc2e 344 Gene3D G3DSA:3.40.50.720 129 310 6.9E-129 T 13-10-2018 VEA_001313 14dc8c0f0995661deb972a0dad72cc2e 344 Gene3D G3DSA:3.90.180.10 17 338 6.9E-129 T 13-10-2018 VEA_001313 14dc8c0f0995661deb972a0dad72cc2e 344 SMART SM00829 19 338 2.1E-5 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VEA_002323 2ba9399bcbd4db5ae5ee1183fa4d3ec7 191 Pfam PF05137 Fimbrial assembly protein (PilN) 103 177 9.0E-11 T 13-10-2018 IPR007813 Fimbrial assembly PilN VEA_003629 f9f7681aa26c21367c5ca69621bc22bd 324 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 15 306 9.4E-87 T 13-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VEA_003629 f9f7681aa26c21367c5ca69621bc22bd 324 PIRSF PIRSF026649 12 315 8.1E-89 T 13-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VEA_003629 f9f7681aa26c21367c5ca69621bc22bd 324 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 15 315 2.5E-140 T 13-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 VEA_003629 f9f7681aa26c21367c5ca69621bc22bd 324 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 14 315 47.048 T 13-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 VEA_002537 7c29242eb73d252655ca6c957d6d1b5c 182 Gene3D G3DSA:2.30.30.240 101 182 3.6E-31 T 13-10-2018 VEA_002537 7c29242eb73d252655ca6c957d6d1b5c 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 14 182 3.4E-55 T 13-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 VEA_002537 7c29242eb73d252655ca6c957d6d1b5c 182 SUPERFAMILY SSF50447 13 100 9.18E-24 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VEA_002537 7c29242eb73d252655ca6c957d6d1b5c 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 13 182 23.743 T 13-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 VEA_002537 7c29242eb73d252655ca6c957d6d1b5c 182 Pfam PF01782 RimM N-terminal domain 15 95 7.6E-25 T 13-10-2018 IPR002676 RimM, N-terminal GO:0006364 VEA_002537 7c29242eb73d252655ca6c957d6d1b5c 182 Pfam PF05239 PRC-barrel domain 103 177 9.7E-12 T 13-10-2018 IPR027275 PRC-barrel domain VEA_002537 7c29242eb73d252655ca6c957d6d1b5c 182 SUPERFAMILY SSF50346 106 182 4.51E-20 T 13-10-2018 IPR011033 PRC-barrel-like superfamily VEA_002537 7c29242eb73d252655ca6c957d6d1b5c 182 Gene3D G3DSA:2.40.30.60 4 100 6.4E-33 T 13-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 VEA_002748 25ea07c6229ce1fe624595960c703d8e 241 PIRSF PIRSF005650 4 241 7.4E-89 T 13-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 VEA_002748 25ea07c6229ce1fe624595960c703d8e 241 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 44.054 T 13-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 VEA_002748 25ea07c6229ce1fe624595960c703d8e 241 Gene3D G3DSA:3.40.1160.10 3 241 2.1E-76 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VEA_002748 25ea07c6229ce1fe624595960c703d8e 241 Pfam PF00696 Amino acid kinase family 11 219 4.7E-27 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VEA_002748 25ea07c6229ce1fe624595960c703d8e 241 SUPERFAMILY SSF53633 7 239 4.71E-72 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VEA_002748 25ea07c6229ce1fe624595960c703d8e 241 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 3.6E-102 T 13-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 VEA_000928 542849e13605d5f3f9e58d7a41998bb1 268 PRINTS PR01543 Arylamine N-acetyltransferase signature 22 45 1.9E-9 T 13-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 VEA_000928 542849e13605d5f3f9e58d7a41998bb1 268 PRINTS PR01543 Arylamine N-acetyltransferase signature 46 69 1.9E-9 T 13-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 VEA_000928 542849e13605d5f3f9e58d7a41998bb1 268 PRINTS PR01543 Arylamine N-acetyltransferase signature 100 125 1.9E-9 T 13-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 VEA_000928 542849e13605d5f3f9e58d7a41998bb1 268 Gene3D G3DSA:2.40.128.150 86 183 2.6E-71 T 13-10-2018 VEA_000928 542849e13605d5f3f9e58d7a41998bb1 268 Gene3D G3DSA:3.30.2140.10 6 253 2.6E-71 T 13-10-2018 VEA_000928 542849e13605d5f3f9e58d7a41998bb1 268 SUPERFAMILY SSF54001 2 257 1.32E-74 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily VEA_000928 542849e13605d5f3f9e58d7a41998bb1 268 Pfam PF00797 N-acetyltransferase 22 258 9.3E-73 T 13-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 VEA_003643 0cb78ba5b1db499147d9b1e7faa8c18f 117 SUPERFAMILY SSF142906 1 115 1.57E-37 T 13-10-2018 IPR038056 YjbR-like superfamily VEA_003643 0cb78ba5b1db499147d9b1e7faa8c18f 117 Gene3D G3DSA:3.90.1150.30 1 117 2.6E-41 T 13-10-2018 IPR038056 YjbR-like superfamily VEA_003643 0cb78ba5b1db499147d9b1e7faa8c18f 117 Pfam PF04237 YjbR 15 102 9.6E-25 T 13-10-2018 IPR007351 Uncharacterised protein YjbR VEA_002735 7653d285111b842e6e3e4900eb27e2e2 329 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 185 1.6E-14 T 13-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VEA_002735 7653d285111b842e6e3e4900eb27e2e2 329 Gene3D G3DSA:3.40.47.10 2 329 2.3E-68 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VEA_002735 7653d285111b842e6e3e4900eb27e2e2 329 SUPERFAMILY SSF53901 5 328 1.71E-32 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VEA_002735 7653d285111b842e6e3e4900eb27e2e2 329 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 242 328 2.4E-17 T 13-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VEA_003247 69ed3182d27d77fa01d95d0d447eec31 88 SMART SM00530 16 71 6.8E-5 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VEA_003247 69ed3182d27d77fa01d95d0d447eec31 88 SUPERFAMILY SSF47413 9 73 8.85E-14 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEA_003247 69ed3182d27d77fa01d95d0d447eec31 88 Gene3D G3DSA:1.10.260.40 3 88 1.2E-12 T 13-10-2018 VEA_003247 69ed3182d27d77fa01d95d0d447eec31 88 Pfam PF01381 Helix-turn-helix 17 68 5.6E-7 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VEA_002651 df40cd544af2a40486c5b73c22886e85 313 Gene3D G3DSA:1.20.81.30 158 278 2.1E-7 T 13-10-2018 VEA_002651 df40cd544af2a40486c5b73c22886e85 313 Pfam PF00482 Type II secretion system (T2SS), protein F 172 299 3.4E-24 T 13-10-2018 IPR018076 Type II secretion system F domain VEA_002604 1bfcf0ebb1724820be984e1c4471bf72 259 Gene3D G3DSA:3.20.20.20 1 258 1.6E-107 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VEA_002604 1bfcf0ebb1724820be984e1c4471bf72 259 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 34 47 - T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VEA_002604 1bfcf0ebb1724820be984e1c4471bf72 259 SUPERFAMILY SSF51717 1 257 3.27E-102 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VEA_002604 1bfcf0ebb1724820be984e1c4471bf72 259 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 1 254 6.0E-102 T 13-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 VEA_002604 1bfcf0ebb1724820be984e1c4471bf72 259 Pfam PF00809 Pterin binding enzyme 1 240 2.9E-89 T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VEA_001092 3b236e51f283adb1f8788248fa40fc61 715 PIRSF PIRSF009393 3 715 9.0E-288 T 13-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 VEA_001092 3b236e51f283adb1f8788248fa40fc61 715 Gene3D G3DSA:3.90.100.10 597 715 1.2E-41 T 13-10-2018 VEA_001092 3b236e51f283adb1f8788248fa40fc61 715 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 106 546 4.9E-188 T 13-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 VEA_001092 3b236e51f283adb1f8788248fa40fc61 715 Gene3D G3DSA:3.40.640.10 106 416 4.4E-85 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_001092 3b236e51f283adb1f8788248fa40fc61 715 Gene3D G3DSA:3.40.50.220 10 105 1.2E-12 T 13-10-2018 IPR027464 Ornithine decarboxylase, N-terminal KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 VEA_001092 3b236e51f283adb1f8788248fa40fc61 715 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 7 100 2.2E-13 T 13-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 VEA_001092 3b236e51f283adb1f8788248fa40fc61 715 SUPERFAMILY SSF55904 567 714 8.11E-45 T 13-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 VEA_001092 3b236e51f283adb1f8788248fa40fc61 715 Gene3D G3DSA:3.90.1150.10 418 596 5.8E-67 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEA_001092 3b236e51f283adb1f8788248fa40fc61 715 TIGRFAM TIGR04301 ODC_inducible: ornithine decarboxylase SpeF 15 714 0.0 T 13-10-2018 IPR027568 Ornithine decarboxylase SpeF GO:0004586 KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 VEA_001092 3b236e51f283adb1f8788248fa40fc61 715 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 347 361 - T 13-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 VEA_001092 3b236e51f283adb1f8788248fa40fc61 715 SUPERFAMILY SSF53383 106 563 2.6E-118 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_001092 3b236e51f283adb1f8788248fa40fc61 715 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 572 700 4.5E-46 T 13-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 VEA_001092 3b236e51f283adb1f8788248fa40fc61 715 SUPERFAMILY SSF52172 16 105 4.37E-23 T 13-10-2018 IPR011006 CheY-like superfamily VEA_001022 eb2597e853f3ff6aafa57fe8f739d99e 184 Pfam PF13302 Acetyltransferase (GNAT) domain 11 150 4.6E-26 T 13-10-2018 IPR000182 GNAT domain VEA_001022 eb2597e853f3ff6aafa57fe8f739d99e 184 SUPERFAMILY SSF55729 2 170 1.93E-35 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_001022 eb2597e853f3ff6aafa57fe8f739d99e 184 Gene3D G3DSA:3.40.630.30 2 163 6.5E-34 T 13-10-2018 VEA_000561 0d30efcc96e3d0d1f88b137c73643951 333 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 297 312 3.4E-6 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEA_000561 0d30efcc96e3d0d1f88b137c73643951 333 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 312 328 3.4E-6 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEA_000561 0d30efcc96e3d0d1f88b137c73643951 333 Pfam PF12833 Helix-turn-helix domain 256 329 5.4E-12 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_000561 0d30efcc96e3d0d1f88b137c73643951 333 Gene3D G3DSA:1.10.10.60 234 332 2.1E-15 T 13-10-2018 VEA_000561 0d30efcc96e3d0d1f88b137c73643951 333 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 29 195 4.0E-17 T 13-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal VEA_000561 0d30efcc96e3d0d1f88b137c73643951 333 SUPERFAMILY SSF46689 289 329 2.11E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_000561 0d30efcc96e3d0d1f88b137c73643951 333 SMART SM00342 247 328 2.8E-11 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_000639 3a322281c630eec8c0d0633a43aa138b 319 PIRSF PIRSF001439 2 318 2.9E-65 T 13-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 VEA_000639 3a322281c630eec8c0d0633a43aa138b 319 Gene3D G3DSA:3.40.50.720 126 296 1.7E-76 T 13-10-2018 VEA_000639 3a322281c630eec8c0d0633a43aa138b 319 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 2 312 4.0E-79 T 13-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 VEA_000639 3a322281c630eec8c0d0633a43aa138b 319 Gene3D G3DSA:3.30.1780.10 6 310 1.7E-76 T 13-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 VEA_000639 3a322281c630eec8c0d0633a43aa138b 319 SUPERFAMILY SSF51735 1 312 7.42E-77 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_002230 4132e4b6cdef8897f80dd8f9117ae805 165 Pfam PF02308 MgtC family 19 141 6.5E-28 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VEA_002230 4132e4b6cdef8897f80dd8f9117ae805 165 PRINTS PR01837 MgtC/SapB protein signature 41 59 1.2E-31 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VEA_002230 4132e4b6cdef8897f80dd8f9117ae805 165 PRINTS PR01837 MgtC/SapB protein signature 95 119 1.2E-31 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VEA_002230 4132e4b6cdef8897f80dd8f9117ae805 165 PRINTS PR01837 MgtC/SapB protein signature 22 41 1.2E-31 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VEA_002230 4132e4b6cdef8897f80dd8f9117ae805 165 PRINTS PR01837 MgtC/SapB protein signature 68 90 1.2E-31 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VEA_003694 a6dbea4e2e90b11e7fef3f16cbab48bf 229 Pfam PF08732 HIM1 78 170 3.4E-9 T 13-10-2018 IPR014843 Protein Him1/Fmp52 VEA_003694 a6dbea4e2e90b11e7fef3f16cbab48bf 229 SUPERFAMILY SSF51735 3 210 6.33E-34 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_003694 a6dbea4e2e90b11e7fef3f16cbab48bf 229 Gene3D G3DSA:3.40.50.720 1 227 4.9E-49 T 13-10-2018 VEA_003165 69205b232eec69e8eefb8e5e0dbdb4bc 514 Gene3D G3DSA:1.10.10.60 458 513 2.9E-25 T 13-10-2018 VEA_003165 69205b232eec69e8eefb8e5e0dbdb4bc 514 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 229 242 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VEA_003165 69205b232eec69e8eefb8e5e0dbdb4bc 514 SMART SM00382 225 368 5.4E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_003165 69205b232eec69e8eefb8e5e0dbdb4bc 514 Pfam PF00989 PAS fold 83 130 5.3E-6 T 13-10-2018 IPR013767 PAS fold GO:0006355 VEA_003165 69205b232eec69e8eefb8e5e0dbdb4bc 514 Gene3D G3DSA:3.30.70.260 1 80 1.3E-25 T 13-10-2018 VEA_003165 69205b232eec69e8eefb8e5e0dbdb4bc 514 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 290 305 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VEA_003165 69205b232eec69e8eefb8e5e0dbdb4bc 514 SUPERFAMILY SSF55785 81 171 1.1E-9 T 13-10-2018 IPR035965 PAS domain superfamily VEA_003165 69205b232eec69e8eefb8e5e0dbdb4bc 514 SUPERFAMILY SSF55021 1 68 1.02E-6 T 13-10-2018 VEA_003165 69205b232eec69e8eefb8e5e0dbdb4bc 514 Pfam PF00158 Sigma-54 interaction domain 206 370 6.6E-57 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VEA_003165 69205b232eec69e8eefb8e5e0dbdb4bc 514 Gene3D G3DSA:1.10.8.60 377 451 3.2E-16 T 13-10-2018 VEA_003165 69205b232eec69e8eefb8e5e0dbdb4bc 514 SMART SM00091 80 146 3.9E-6 T 13-10-2018 IPR000014 PAS domain VEA_003165 69205b232eec69e8eefb8e5e0dbdb4bc 514 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 465 513 3.0E-28 T 13-10-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 VEA_003165 69205b232eec69e8eefb8e5e0dbdb4bc 514 SUPERFAMILY SSF52540 205 445 1.42E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003165 69205b232eec69e8eefb8e5e0dbdb4bc 514 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 417 426 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VEA_003165 69205b232eec69e8eefb8e5e0dbdb4bc 514 Gene3D G3DSA:3.40.50.300 198 375 1.3E-56 T 13-10-2018 VEA_003165 69205b232eec69e8eefb8e5e0dbdb4bc 514 SUPERFAMILY SSF46689 461 512 9.56E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_003165 69205b232eec69e8eefb8e5e0dbdb4bc 514 Gene3D G3DSA:3.30.450.20 82 189 1.7E-19 T 13-10-2018 VEA_001860 b7a655cce0a8be72f8c8e83557d561fe 210 SUPERFAMILY SSF74653 122 207 7.72E-18 T 13-10-2018 VEA_001860 b7a655cce0a8be72f8c8e83557d561fe 210 Gene3D G3DSA:3.30.1150.10 112 209 8.6E-21 T 13-10-2018 VEA_001860 b7a655cce0a8be72f8c8e83557d561fe 210 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 130 208 3.0E-15 T 13-10-2018 IPR037682 TonB, C-terminal GO:0055085 VEA_001860 b7a655cce0a8be72f8c8e83557d561fe 210 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 132 209 1.2E-12 T 13-10-2018 IPR006260 TonB/TolA, C-terminal VEA_003332 f660d2789937e0c485fcfae17c78b765 148 Pfam PF05932 Tir chaperone protein (CesT) family 10 124 2.9E-14 T 13-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 VEA_003332 f660d2789937e0c485fcfae17c78b765 148 Gene3D G3DSA:3.30.1460.10 1 131 5.9E-29 T 13-10-2018 VEA_003332 f660d2789937e0c485fcfae17c78b765 148 SUPERFAMILY SSF69635 4 141 2.61E-27 T 13-10-2018 VEA_004295 dc8ce44c1ca336ba15711312e2bbbc66 396 Pfam PF11301 Protein of unknown function (DUF3103) 40 394 8.5E-179 T 13-10-2018 IPR021452 Protein of unknown function DUF3103 VEA_003139 8eb18e66eb2d29ec25a55671b5bcd81f 627 SUPERFAMILY SSF58104 318 627 3.14E-76 T 13-10-2018 VEA_003139 8eb18e66eb2d29ec25a55671b5bcd81f 627 SUPERFAMILY SSF103190 86 174 1.46E-11 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VEA_003139 8eb18e66eb2d29ec25a55671b5bcd81f 627 Gene3D G3DSA:1.10.287.950 297 627 1.8E-72 T 13-10-2018 VEA_003139 8eb18e66eb2d29ec25a55671b5bcd81f 627 SMART SM00283 365 626 4.4E-64 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_003139 8eb18e66eb2d29ec25a55671b5bcd81f 627 Gene3D G3DSA:3.30.450.20 50 264 7.2E-54 T 13-10-2018 VEA_003139 8eb18e66eb2d29ec25a55671b5bcd81f 627 Pfam PF00672 HAMP domain 300 346 7.8E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_003139 8eb18e66eb2d29ec25a55671b5bcd81f 627 SMART SM00304 353 403 5.3 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_003139 8eb18e66eb2d29ec25a55671b5bcd81f 627 SMART SM00304 296 350 8.4E-11 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_003139 8eb18e66eb2d29ec25a55671b5bcd81f 627 Gene3D G3DSA:3.30.450.20 60 168 7.2E-54 T 13-10-2018 VEA_003139 8eb18e66eb2d29ec25a55671b5bcd81f 627 Pfam PF02743 Cache domain 40 258 2.5E-32 T 13-10-2018 IPR033479 Double Cache domain 1 VEA_003139 8eb18e66eb2d29ec25a55671b5bcd81f 627 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 427 593 1.0E-38 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_003895 d5f32f92b9016dfc4a3f8aa81215f083 379 Gene3D G3DSA:1.10.287.470 98 171 1.2E-108 T 13-10-2018 VEA_003895 d5f32f92b9016dfc4a3f8aa81215f083 379 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 373 7.7E-86 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VEA_003895 d5f32f92b9016dfc4a3f8aa81215f083 379 Gene3D G3DSA:2.40.420.20 302 371 1.2E-108 T 13-10-2018 VEA_003895 d5f32f92b9016dfc4a3f8aa81215f083 379 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 64 291 6.6E-16 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VEA_003895 d5f32f92b9016dfc4a3f8aa81215f083 379 Gene3D G3DSA:2.40.50.100 63 207 1.2E-108 T 13-10-2018 VEA_003895 d5f32f92b9016dfc4a3f8aa81215f083 379 Gene3D G3DSA:2.40.30.170 50 301 1.2E-108 T 13-10-2018 VEA_003895 d5f32f92b9016dfc4a3f8aa81215f083 379 SUPERFAMILY SSF111369 50 297 3.4E-82 T 13-10-2018 VEA_002612 ac8f72c46cf8fe7cfcb26171a22a5aa3 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.574 T 13-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002612 ac8f72c46cf8fe7cfcb26171a22a5aa3 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 13-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_002612 ac8f72c46cf8fe7cfcb26171a22a5aa3 89 Gene3D G3DSA:1.10.287.10 2 89 6.3E-35 T 13-10-2018 VEA_002612 ac8f72c46cf8fe7cfcb26171a22a5aa3 89 SUPERFAMILY SSF47060 3 89 1.21E-34 T 13-10-2018 IPR009068 S15/NS1, RNA-binding VEA_002612 ac8f72c46cf8fe7cfcb26171a22a5aa3 89 SMART SM01387 8 88 4.4E-52 T 13-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_002612 ac8f72c46cf8fe7cfcb26171a22a5aa3 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 2.0E-29 T 13-10-2018 VEA_002612 ac8f72c46cf8fe7cfcb26171a22a5aa3 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 9.4E-39 T 13-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002612 ac8f72c46cf8fe7cfcb26171a22a5aa3 89 Pfam PF00312 Ribosomal protein S15 8 88 5.5E-36 T 13-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_002877 041701b5a8657471d380cbac1aa89f28 197 Gene3D G3DSA:3.30.70.1070 115 191 2.1E-9 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VEA_002877 041701b5a8657471d380cbac1aa89f28 197 Pfam PF05036 Sporulation related domain 121 189 9.7E-12 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 VEA_002877 041701b5a8657471d380cbac1aa89f28 197 SUPERFAMILY SSF110997 120 193 6.41E-15 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VEA_004301 11f5c822cb3f5e71cdfb956d31eb2176 415 Gene3D G3DSA:1.10.150.130 102 215 1.3E-29 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal VEA_004301 11f5c822cb3f5e71cdfb956d31eb2176 415 Pfam PF13356 Arm DNA-binding domain 8 94 8.5E-20 T 13-10-2018 IPR025166 Integrase, DNA-binding domain VEA_004301 11f5c822cb3f5e71cdfb956d31eb2176 415 Pfam PF00589 Phage integrase family 214 376 5.4E-27 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VEA_004301 11f5c822cb3f5e71cdfb956d31eb2176 415 Gene3D G3DSA:1.10.443.10 216 387 3.8E-18 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VEA_004301 11f5c822cb3f5e71cdfb956d31eb2176 415 SUPERFAMILY SSF56349 106 386 1.32E-59 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VEA_004301 11f5c822cb3f5e71cdfb956d31eb2176 415 Gene3D G3DSA:3.30.160.390 6 95 2.6E-29 T 13-10-2018 IPR038488 Integrase, DNA-binding domain superfamily VEA_003276 bddcd25ccb8522006044a955c84f6267 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 2.5E-16 T 13-10-2018 IPR021681 Protein of unknown function DUF3265 VEA_003029 9ca50f42f8ad093d2360ed60cb4d9b5d 401 Pfam PF04403 Paraquat-inducible protein A 223 380 4.5E-54 T 13-10-2018 IPR007498 Intermembrane transport protein PqiA-like VEA_003029 9ca50f42f8ad093d2360ed60cb4d9b5d 401 Pfam PF04403 Paraquat-inducible protein A 7 166 9.2E-39 T 13-10-2018 IPR007498 Intermembrane transport protein PqiA-like VEA_003029 9ca50f42f8ad093d2360ed60cb4d9b5d 401 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 6 380 4.9E-88 T 13-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type VEA_004330 2c2bcbe733b6e0a13d155e416bcbbc19 507 Pfam PF03553 Na+/H+ antiporter family 161 469 9.0E-51 T 13-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VEA_001742 5ab4bfc7ccc35b07d44ec7c994b4181a 209 Gene3D G3DSA:2.40.50.620 32 96 2.2E-15 T 13-10-2018 VEA_001742 5ab4bfc7ccc35b07d44ec7c994b4181a 209 Pfam PF00297 Ribosomal protein L3 93 182 2.1E-16 T 13-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_001742 5ab4bfc7ccc35b07d44ec7c994b4181a 209 SUPERFAMILY SSF50447 1 208 3.44E-84 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VEA_001742 5ab4bfc7ccc35b07d44ec7c994b4181a 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 6.2E-95 T 13-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001742 5ab4bfc7ccc35b07d44ec7c994b4181a 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 13-10-2018 IPR019926 Ribosomal protein L3, conserved site VEA_001742 5ab4bfc7ccc35b07d44ec7c994b4181a 209 Gene3D G3DSA:2.40.30.10 129 209 5.6E-20 T 13-10-2018 VEA_001742 5ab4bfc7ccc35b07d44ec7c994b4181a 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 41.199 T 13-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_000625 9ca224930070c6f53c4f4e1bb81e7e66 352 SUPERFAMILY SSF50129 12 176 4.41E-31 T 13-10-2018 IPR011032 GroES-like superfamily VEA_000625 9ca224930070c6f53c4f4e1bb81e7e66 352 SMART SM00829 12 341 0.0089 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VEA_000625 9ca224930070c6f53c4f4e1bb81e7e66 352 Gene3D G3DSA:3.90.180.10 13 329 8.4E-75 T 13-10-2018 VEA_000625 9ca224930070c6f53c4f4e1bb81e7e66 352 SUPERFAMILY SSF51735 143 306 5.16E-33 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_000625 9ca224930070c6f53c4f4e1bb81e7e66 352 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 104 1.2E-9 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VEA_000625 9ca224930070c6f53c4f4e1bb81e7e66 352 Pfam PF00107 Zinc-binding dehydrogenase 177 304 3.9E-18 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VEA_000625 9ca224930070c6f53c4f4e1bb81e7e66 352 Gene3D G3DSA:3.40.50.720 154 289 8.4E-75 T 13-10-2018 VEA_001557 df3bab3a598f29ef6005363c58c94d0e 290 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 57 79 - T 13-10-2018 IPR030470 UbiA prenyltransferase conserved site VEA_001557 df3bab3a598f29ef6005363c58c94d0e 290 Gene3D G3DSA:1.10.357.140 13 182 3.3E-16 T 13-10-2018 VEA_001557 df3bab3a598f29ef6005363c58c94d0e 290 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 1 284 16.958 T 13-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 VEA_001557 df3bab3a598f29ef6005363c58c94d0e 290 Pfam PF01040 UbiA prenyltransferase family 18 269 1.0E-53 T 13-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 VEA_001557 df3bab3a598f29ef6005363c58c94d0e 290 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 3 275 4.3E-83 T 13-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 VEA_003060 0e0a63a1b7a0857d9716239b707348a0 412 Gene3D G3DSA:3.80.10.10 3 101 3.2E-17 T 13-10-2018 IPR032675 Leucine-rich repeat domain superfamily VEA_003060 0e0a63a1b7a0857d9716239b707348a0 412 Gene3D G3DSA:3.80.10.10 102 203 1.0E-18 T 13-10-2018 IPR032675 Leucine-rich repeat domain superfamily VEA_003060 0e0a63a1b7a0857d9716239b707348a0 412 Pfam PF13855 Leucine rich repeat 37 92 2.4E-6 T 13-10-2018 IPR001611 Leucine-rich repeat GO:0005515 VEA_003060 0e0a63a1b7a0857d9716239b707348a0 412 Pfam PF13855 Leucine rich repeat 127 184 1.3E-6 T 13-10-2018 IPR001611 Leucine-rich repeat GO:0005515 VEA_003060 0e0a63a1b7a0857d9716239b707348a0 412 SMART SM00369 37 57 32.0 T 13-10-2018 IPR003591 Leucine-rich repeat, typical subtype VEA_003060 0e0a63a1b7a0857d9716239b707348a0 412 SMART SM00369 102 126 52.0 T 13-10-2018 IPR003591 Leucine-rich repeat, typical subtype VEA_003060 0e0a63a1b7a0857d9716239b707348a0 412 SMART SM00369 127 148 130.0 T 13-10-2018 IPR003591 Leucine-rich repeat, typical subtype VEA_003060 0e0a63a1b7a0857d9716239b707348a0 412 SMART SM00369 149 172 12.0 T 13-10-2018 IPR003591 Leucine-rich repeat, typical subtype VEA_003060 0e0a63a1b7a0857d9716239b707348a0 412 SMART SM00369 58 81 5.5 T 13-10-2018 IPR003591 Leucine-rich repeat, typical subtype VEA_003060 0e0a63a1b7a0857d9716239b707348a0 412 SUPERFAMILY SSF56112 195 368 2.6E-25 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily VEA_003060 0e0a63a1b7a0857d9716239b707348a0 412 SMART SM00220 203 404 4.7E-6 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VEA_003060 0e0a63a1b7a0857d9716239b707348a0 412 SUPERFAMILY SSF52058 9 190 6.97E-34 T 13-10-2018 VEA_003060 0e0a63a1b7a0857d9716239b707348a0 412 Pfam PF00069 Protein kinase domain 203 365 1.6E-16 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VEA_003060 0e0a63a1b7a0857d9716239b707348a0 412 SMART SM00364 35 54 90.0 T 13-10-2018 VEA_003060 0e0a63a1b7a0857d9716239b707348a0 412 SMART SM00364 58 77 8.3 T 13-10-2018 VEA_003060 0e0a63a1b7a0857d9716239b707348a0 412 SMART SM00364 103 122 11.0 T 13-10-2018 VEA_003060 0e0a63a1b7a0857d9716239b707348a0 412 SMART SM00364 126 145 140.0 T 13-10-2018 VEA_003060 0e0a63a1b7a0857d9716239b707348a0 412 Gene3D G3DSA:1.10.510.10 204 387 3.5E-20 T 13-10-2018 VEA_003060 0e0a63a1b7a0857d9716239b707348a0 412 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 209 236 - T 13-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 VEA_000718 544a5df17985a269d79d5349cd6cf5b8 157 SUPERFAMILY SSF54593 46 154 1.17E-24 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEA_000718 544a5df17985a269d79d5349cd6cf5b8 157 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 47 150 2.2E-5 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VEA_000718 544a5df17985a269d79d5349cd6cf5b8 157 Gene3D G3DSA:3.10.180.10 46 156 2.1E-17 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEA_002480 863cbcd0ec69b8547594339ff3786768 218 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 1.4E-58 T 13-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 VEA_002480 863cbcd0ec69b8547594339ff3786768 218 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 214 5.8E-69 T 13-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 VEA_002480 863cbcd0ec69b8547594339ff3786768 218 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 33.484 T 13-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 VEA_002480 863cbcd0ec69b8547594339ff3786768 218 SUPERFAMILY SSF75445 127 198 6.8E-24 T 13-10-2018 VEA_002480 863cbcd0ec69b8547594339ff3786768 218 SUPERFAMILY SSF100950 1 146 3.16E-47 T 13-10-2018 IPR037171 NagB/RpiA transferase-like VEA_002480 863cbcd0ec69b8547594339ff3786768 218 Gene3D G3DSA:3.40.50.1360 7 207 1.3E-78 T 13-10-2018 VEA_002480 863cbcd0ec69b8547594339ff3786768 218 Gene3D G3DSA:3.30.70.260 125 196 1.3E-78 T 13-10-2018 VEA_003241 d65b2f288599ea743c3fb8d33fcfbade 483 Pfam PF15611 EH_Signature domain 26 449 7.3E-83 T 13-10-2018 IPR028943 EH signature domain VEA_003344 45699fdefd6c4f0ae0b6f057e5c4e2fa 247 Gene3D G3DSA:3.30.300.30 92 200 2.6E-39 T 13-10-2018 VEA_003344 45699fdefd6c4f0ae0b6f057e5c4e2fa 247 Gene3D G3DSA:3.30.70.1530 19 90 8.8E-25 T 13-10-2018 VEA_003344 45699fdefd6c4f0ae0b6f057e5c4e2fa 247 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 24 34 7.9E-29 T 13-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 VEA_003344 45699fdefd6c4f0ae0b6f057e5c4e2fa 247 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 96 111 7.9E-29 T 13-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 VEA_003344 45699fdefd6c4f0ae0b6f057e5c4e2fa 247 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 165 177 7.9E-29 T 13-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 VEA_003344 45699fdefd6c4f0ae0b6f057e5c4e2fa 247 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 116 129 7.9E-29 T 13-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 VEA_003344 45699fdefd6c4f0ae0b6f057e5c4e2fa 247 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 76 89 7.9E-29 T 13-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 VEA_003344 45699fdefd6c4f0ae0b6f057e5c4e2fa 247 TIGRFAM TIGR02544 III_secr_YscJ: type III secretion apparatus lipoprotein, YscJ/HrcJ family 6 193 4.1E-70 T 13-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 VEA_003344 45699fdefd6c4f0ae0b6f057e5c4e2fa 247 Pfam PF01514 Secretory protein of YscJ/FliF family 8 187 1.6E-23 T 13-10-2018 IPR006182 Secretory protein YscJ/FliF VEA_002120 8b2a0b57a73d73304ef7bb425395a0bb 274 ProSitePatterns PS01229 Hypothetical cof family signature 2. 221 243 - T 13-10-2018 VEA_002120 8b2a0b57a73d73304ef7bb425395a0bb 274 Gene3D G3DSA:3.40.50.1000 14 265 2.8E-75 T 13-10-2018 IPR023214 HAD superfamily VEA_002120 8b2a0b57a73d73304ef7bb425395a0bb 274 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 13 269 1.6E-61 T 13-10-2018 IPR000150 Cof family GO:0016787 VEA_002120 8b2a0b57a73d73304ef7bb425395a0bb 274 SUPERFAMILY SSF56784 12 273 2.44E-68 T 13-10-2018 IPR036412 HAD-like superfamily VEA_002120 8b2a0b57a73d73304ef7bb425395a0bb 274 ProSitePatterns PS01228 Hypothetical cof family signature 1. 13 24 - T 13-10-2018 VEA_002120 8b2a0b57a73d73304ef7bb425395a0bb 274 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 13 240 5.4E-35 T 13-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 VEA_002120 8b2a0b57a73d73304ef7bb425395a0bb 274 Pfam PF08282 haloacid dehalogenase-like hydrolase 14 269 6.2E-69 T 13-10-2018 VEA_002120 8b2a0b57a73d73304ef7bb425395a0bb 274 Gene3D G3DSA:3.30.1240.10 91 195 2.8E-75 T 13-10-2018 VEA_002603 2adc82724624c827a8ab402eb311694f 660 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 105 597 7.3E-244 T 13-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 VEA_002603 2adc82724624c827a8ab402eb311694f 660 Gene3D G3DSA:2.40.50.920 27 103 3.5E-29 T 13-10-2018 VEA_002603 2adc82724624c827a8ab402eb311694f 660 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 192 324 5.2E-46 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VEA_002603 2adc82724624c827a8ab402eb311694f 660 Pfam PF06480 FtsH Extracellular 8 97 1.0E-11 T 13-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 VEA_002603 2adc82724624c827a8ab402eb311694f 660 SUPERFAMILY SSF140990 406 600 4.05E-76 T 13-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 VEA_002603 2adc82724624c827a8ab402eb311694f 660 SUPERFAMILY SSF52540 147 395 9.3E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002603 2adc82724624c827a8ab402eb311694f 660 Gene3D G3DSA:1.10.8.60 327 400 2.1E-27 T 13-10-2018 VEA_002603 2adc82724624c827a8ab402eb311694f 660 SMART SM00382 188 327 5.1E-26 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_002603 2adc82724624c827a8ab402eb311694f 660 Gene3D G3DSA:3.40.50.300 140 326 3.0E-70 T 13-10-2018 VEA_002603 2adc82724624c827a8ab402eb311694f 660 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 613 37.415 T 13-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 VEA_002603 2adc82724624c827a8ab402eb311694f 660 Pfam PF01434 Peptidase family M41 386 595 2.3E-82 T 13-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 VEA_002603 2adc82724624c827a8ab402eb311694f 660 Gene3D G3DSA:1.20.58.760 401 605 1.7E-73 T 13-10-2018 VEA_002603 2adc82724624c827a8ab402eb311694f 660 ProSitePatterns PS00674 AAA-protein family signature. 295 313 - T 13-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 VEA_000900 37e8bedf494f6efcd258df89568c012f 81 Gene3D G3DSA:2.30.30.400 2 79 1.5E-15 T 13-10-2018 IPR038626 Rof-like superfamily VEA_000900 37e8bedf494f6efcd258df89568c012f 81 SUPERFAMILY SSF101744 1 80 1.73E-21 T 13-10-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 VEA_000900 37e8bedf494f6efcd258df89568c012f 81 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 1 80 2.7E-28 T 13-10-2018 IPR009778 Modulator of Rho-dependent transcription termination VEA_001758 cbb51dd2f3297f29b6ae7ed8329441be 140 Pfam PF05656 Protein of unknown function (DUF805) 8 139 2.4E-20 T 13-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 VEA_001024 7e710031b744fa9ef9f1545193a89b5a 158 SUPERFAMILY SSF46785 3 64 2.05E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_001024 7e710031b744fa9ef9f1545193a89b5a 158 Pfam PF13412 Winged helix-turn-helix DNA-binding 5 51 3.9E-16 T 13-10-2018 VEA_001024 7e710031b744fa9ef9f1545193a89b5a 158 ProSitePatterns PS00519 AsnC-type HTH domain signature. 23 49 - T 13-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VEA_001024 7e710031b744fa9ef9f1545193a89b5a 158 SMART SM00344 5 114 2.8E-43 T 13-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VEA_001024 7e710031b744fa9ef9f1545193a89b5a 158 Gene3D G3DSA:3.30.70.920 57 151 4.0E-26 T 13-10-2018 VEA_001024 7e710031b744fa9ef9f1545193a89b5a 158 Pfam PF01037 Lrp/AsnC ligand binding domain 71 145 4.3E-22 T 13-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VEA_001024 7e710031b744fa9ef9f1545193a89b5a 158 Gene3D G3DSA:1.10.10.10 1 56 3.4E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001024 7e710031b744fa9ef9f1545193a89b5a 158 SUPERFAMILY SSF54909 65 150 1.88E-20 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel VEA_001024 7e710031b744fa9ef9f1545193a89b5a 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 7.6E-15 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEA_001024 7e710031b744fa9ef9f1545193a89b5a 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 7.6E-15 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEA_001024 7e710031b744fa9ef9f1545193a89b5a 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 7.6E-15 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VEA_002854 3eea86b7ba68ba0a78f20bb71f2d3097 168 Pfam PF04542 Sigma-70 region 2 10 76 1.6E-17 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VEA_002854 3eea86b7ba68ba0a78f20bb71f2d3097 168 Gene3D G3DSA:1.10.10.10 95 158 1.1E-14 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_002854 3eea86b7ba68ba0a78f20bb71f2d3097 168 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 7 156 9.1E-23 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VEA_002854 3eea86b7ba68ba0a78f20bb71f2d3097 168 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 32 63 - T 13-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VEA_002854 3eea86b7ba68ba0a78f20bb71f2d3097 168 SUPERFAMILY SSF88946 4 86 6.67E-21 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VEA_002854 3eea86b7ba68ba0a78f20bb71f2d3097 168 Pfam PF08281 Sigma-70, region 4 100 152 4.5E-10 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VEA_002854 3eea86b7ba68ba0a78f20bb71f2d3097 168 SUPERFAMILY SSF88659 97 157 2.24E-12 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VEA_002854 3eea86b7ba68ba0a78f20bb71f2d3097 168 Gene3D G3DSA:1.10.1740.10 1 72 5.4E-18 T 13-10-2018 VEA_000567 a3315cf79861b817b0dd345133546fd4 425 Pfam PF07969 Amidohydrolase family 42 403 7.0E-55 T 13-10-2018 IPR013108 Amidohydrolase 3 VEA_000567 a3315cf79861b817b0dd345133546fd4 425 SUPERFAMILY SSF51338 1 76 5.61E-8 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VEA_000567 a3315cf79861b817b0dd345133546fd4 425 Gene3D G3DSA:2.30.40.10 8 409 1.0E-177 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VEA_000567 a3315cf79861b817b0dd345133546fd4 425 SUPERFAMILY SSF51556 54 372 1.64E-105 T 13-10-2018 IPR032466 Metal-dependent hydrolase VEA_000567 a3315cf79861b817b0dd345133546fd4 425 Gene3D G3DSA:3.20.20.140 55 362 1.0E-177 T 13-10-2018 VEA_001114 5a98167ec2f572f92fb3177752e18ded 434 Gene3D G3DSA:1.10.3860.10 2 413 5.5E-140 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VEA_001114 5a98167ec2f572f92fb3177752e18ded 434 PRINTS PR00173 Glutamate-aspartate symporter signature 231 250 4.4E-52 T 13-10-2018 VEA_001114 5a98167ec2f572f92fb3177752e18ded 434 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 4.4E-52 T 13-10-2018 VEA_001114 5a98167ec2f572f92fb3177752e18ded 434 PRINTS PR00173 Glutamate-aspartate symporter signature 56 76 4.4E-52 T 13-10-2018 VEA_001114 5a98167ec2f572f92fb3177752e18ded 434 PRINTS PR00173 Glutamate-aspartate symporter signature 333 352 4.4E-52 T 13-10-2018 VEA_001114 5a98167ec2f572f92fb3177752e18ded 434 PRINTS PR00173 Glutamate-aspartate symporter signature 298 324 4.4E-52 T 13-10-2018 VEA_001114 5a98167ec2f572f92fb3177752e18ded 434 PRINTS PR00173 Glutamate-aspartate symporter signature 86 111 4.4E-52 T 13-10-2018 VEA_001114 5a98167ec2f572f92fb3177752e18ded 434 PRINTS PR00173 Glutamate-aspartate symporter signature 360 380 4.4E-52 T 13-10-2018 VEA_001114 5a98167ec2f572f92fb3177752e18ded 434 PRINTS PR00173 Glutamate-aspartate symporter signature 196 215 4.4E-52 T 13-10-2018 VEA_001114 5a98167ec2f572f92fb3177752e18ded 434 Pfam PF00375 Sodium:dicarboxylate symporter family 9 405 9.0E-131 T 13-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 VEA_001114 5a98167ec2f572f92fb3177752e18ded 434 SUPERFAMILY SSF118215 9 407 9.55E-121 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VEA_003398 8cba2ef77441543248bdca928fec14f5 226 SUPERFAMILY SSF102114 31 121 6.28E-5 T 13-10-2018 VEA_003398 8cba2ef77441543248bdca928fec14f5 226 PIRSF PIRSF000370 4 226 2.5E-69 T 13-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 VEA_003398 8cba2ef77441543248bdca928fec14f5 226 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 6 226 34.007 T 13-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 VEA_003398 8cba2ef77441543248bdca928fec14f5 226 Pfam PF13394 4Fe-4S single cluster domain 27 133 4.2E-10 T 13-10-2018 VEA_003398 8cba2ef77441543248bdca928fec14f5 226 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 12 225 9.1E-111 T 13-10-2018 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 VEA_003398 8cba2ef77441543248bdca928fec14f5 226 Gene3D G3DSA:3.20.20.70 5 226 3.1E-53 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_000713 a4ae8593fe373e651f953995190a2cb9 294 PIRSF PIRSF018982 6 277 9.2E-88 T 13-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 VEA_000713 a4ae8593fe373e651f953995190a2cb9 294 Gene3D G3DSA:3.40.50.11240 84 267 2.2E-64 T 13-10-2018 VEA_000713 a4ae8593fe373e651f953995190a2cb9 294 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 21 268 6.9E-89 T 13-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 VEA_000713 a4ae8593fe373e651f953995190a2cb9 294 Gene3D G3DSA:1.10.30.40 16 65 8.3E-11 T 13-10-2018 VEA_004095 53f157a982c3049142934547d0f9c37f 646 Gene3D G3DSA:3.40.50.300 19 287 2.1E-49 T 13-10-2018 VEA_004095 53f157a982c3049142934547d0f9c37f 646 SMART SM00491 477 606 2.0E-45 T 13-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VEA_004095 53f157a982c3049142934547d0f9c37f 646 SUPERFAMILY SSF52540 42 602 2.66E-11 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_004095 53f157a982c3049142934547d0f9c37f 646 SMART SM00487 17 302 0.004 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEA_004095 53f157a982c3049142934547d0f9c37f 646 Gene3D G3DSA:3.40.50.300 443 636 7.5E-36 T 13-10-2018 VEA_004095 53f157a982c3049142934547d0f9c37f 646 Pfam PF13307 Helicase C-terminal domain 462 619 1.0E-33 T 13-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VEA_004095 53f157a982c3049142934547d0f9c37f 646 SUPERFAMILY SSF52540 14 236 1.44E-24 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_004095 53f157a982c3049142934547d0f9c37f 646 Pfam PF04851 Type III restriction enzyme, res subunit 19 235 1.7E-5 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VEA_000172 77c667796215c35b5c2cbb490f9db1cc 206 Pfam PF12339 DNA-J related protein 17 138 2.7E-41 T 13-10-2018 IPR021059 DnaJ-related protein, N-terminal VEA_000172 77c667796215c35b5c2cbb490f9db1cc 206 SUPERFAMILY SSF46565 103 206 3.53E-16 T 13-10-2018 IPR036869 Chaperone J-domain superfamily VEA_000172 77c667796215c35b5c2cbb490f9db1cc 206 Pfam PF00226 DnaJ domain 159 205 1.5E-11 T 13-10-2018 IPR001623 DnaJ domain VEA_000172 77c667796215c35b5c2cbb490f9db1cc 206 Gene3D G3DSA:1.10.287.110 147 206 1.5E-13 T 13-10-2018 IPR036869 Chaperone J-domain superfamily VEA_000172 77c667796215c35b5c2cbb490f9db1cc 206 SMART SM00271 153 206 4.2E-11 T 13-10-2018 IPR001623 DnaJ domain VEA_002075 92b29079ee569f9f9488f2619cfcd007 84 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 21 84 1.6E-16 T 13-10-2018 IPR010035 ThiS, thiamine-biosynthesis VEA_002075 92b29079ee569f9f9488f2619cfcd007 84 SUPERFAMILY SSF54285 19 84 1.13E-14 T 13-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VEA_002075 92b29079ee569f9f9488f2619cfcd007 84 Pfam PF02597 ThiS family 25 84 1.1E-12 T 13-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 VEA_002075 92b29079ee569f9f9488f2619cfcd007 84 Gene3D G3DSA:3.10.20.30 19 84 2.5E-18 T 13-10-2018 IPR012675 Beta-grasp domain superfamily VEA_001756 ca8f261ff7b194c126e50b465fdbaf51 116 Pfam PF11333 Protein of unknown function (DUF3135) 12 91 2.5E-34 T 13-10-2018 IPR021482 Protein of unknown function DUF3135 VEA_000915 b513cbc71dfcabb084e7d7cce09d20e4 225 SUPERFAMILY SSF56935 43 147 5.23E-7 T 13-10-2018 VEA_000915 b513cbc71dfcabb084e7d7cce09d20e4 225 Gene3D G3DSA:2.40.160.40 22 225 5.6E-42 T 13-10-2018 VEA_000915 b513cbc71dfcabb084e7d7cce09d20e4 225 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 17 225 1.6E-26 T 13-10-2018 IPR009331 Oligogalacturonate-specific porin VEA_003371 0e9f48f1c714374a0dc589d1e1fb1617 113 PIRSF PIRSF017117 1 111 8.0E-45 T 13-10-2018 IPR016684 Type III secretion system chaperone, YscY VEA_003371 0e9f48f1c714374a0dc589d1e1fb1617 113 Gene3D G3DSA:1.25.40.10 6 113 2.3E-16 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_003371 0e9f48f1c714374a0dc589d1e1fb1617 113 SUPERFAMILY SSF48452 5 110 5.81E-18 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_003371 0e9f48f1c714374a0dc589d1e1fb1617 113 Pfam PF14559 Tetratricopeptide repeat 19 75 1.0E-9 T 13-10-2018 VEA_000440 961d10fe2f4be39a1aaf5e1573e82b58 491 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 68 490 7.6E-180 T 13-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath VEA_000440 961d10fe2f4be39a1aaf5e1573e82b58 491 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 18 490 1.6E-218 T 13-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath VEA_002736 37a1c7784ee7e4a8cafff81688a34f5d 149 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 30.1 T 13-10-2018 IPR003791 Protein of unknown function UPF0178 VEA_002736 37a1c7784ee7e4a8cafff81688a34f5d 149 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 145 1.0E-48 T 13-10-2018 IPR003791 Protein of unknown function UPF0178 VEA_002760 73b67af74e1025fbb0fb86397e9d787e 379 SUPERFAMILY SSF53756 6 379 1.1E-28 T 13-10-2018 VEA_002760 73b67af74e1025fbb0fb86397e9d787e 379 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 4 378 42.099 T 13-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 VEA_002760 73b67af74e1025fbb0fb86397e9d787e 379 Pfam PF02684 Lipid-A-disaccharide synthetase 7 372 1.3E-131 T 13-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 VEA_002760 73b67af74e1025fbb0fb86397e9d787e 379 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 3 376 3.5E-145 T 13-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 VEA_001252 c935a73a713d754f1827ee5c929a5a1d 471 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 325 337 - T 13-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal VEA_001252 c935a73a713d754f1827ee5c929a5a1d 471 Gene3D G3DSA:1.25.40.80 133 286 9.7E-77 T 13-10-2018 VEA_001252 c935a73a713d754f1827ee5c929a5a1d 471 Gene3D G3DSA:1.10.579.10 293 471 2.2E-80 T 13-10-2018 VEA_001252 c935a73a713d754f1827ee5c929a5a1d 471 Pfam PF03441 FAD binding domain of DNA photolyase 275 467 4.2E-81 T 13-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 VEA_001252 c935a73a713d754f1827ee5c929a5a1d 471 PRINTS PR00147 DNA photolyase signature 345 363 1.1E-29 T 13-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VEA_001252 c935a73a713d754f1827ee5c929a5a1d 471 PRINTS PR00147 DNA photolyase signature 325 341 1.1E-29 T 13-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VEA_001252 c935a73a713d754f1827ee5c929a5a1d 471 PRINTS PR00147 DNA photolyase signature 384 398 1.1E-29 T 13-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VEA_001252 c935a73a713d754f1827ee5c929a5a1d 471 PRINTS PR00147 DNA photolyase signature 142 158 1.1E-29 T 13-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VEA_001252 c935a73a713d754f1827ee5c929a5a1d 471 Gene3D G3DSA:3.40.50.620 3 204 9.7E-77 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_001252 c935a73a713d754f1827ee5c929a5a1d 471 Pfam PF00875 DNA photolyase 3 167 4.5E-46 T 13-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 VEA_001252 c935a73a713d754f1827ee5c929a5a1d 471 SUPERFAMILY SSF52425 1 184 2.22E-51 T 13-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 VEA_001252 c935a73a713d754f1827ee5c929a5a1d 471 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 345 364 - T 13-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal VEA_001252 c935a73a713d754f1827ee5c929a5a1d 471 SUPERFAMILY SSF48173 191 470 1.83E-106 T 13-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 VEA_002384 f26c3cb31a564511c2738eca246e7b7d 299 Gene3D G3DSA:2.40.10.350 180 257 4.2E-37 T 13-10-2018 VEA_002384 f26c3cb31a564511c2738eca246e7b7d 299 PIRSF PIRSF038471 2 283 2.0E-82 T 13-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 VEA_002384 f26c3cb31a564511c2738eca246e7b7d 299 Pfam PF04085 rod shape-determining protein MreC 123 269 1.4E-40 T 13-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 VEA_002384 f26c3cb31a564511c2738eca246e7b7d 299 Gene3D G3DSA:2.40.10.340 122 266 4.2E-37 T 13-10-2018 VEA_002384 f26c3cb31a564511c2738eca246e7b7d 299 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 274 9.8E-92 T 13-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 VEA_003777 0afe78a7e4512adbbd28566defa7f486 326 TIGRFAM TIGR03508 decahem_SO: decaheme c-type cytochrome, DmsE family 59 319 7.0E-100 T 13-10-2018 IPR020015 Decaheme cytochrome, c-type, DmsE VEA_003777 0afe78a7e4512adbbd28566defa7f486 326 SUPERFAMILY SSF48695 61 310 4.97E-49 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily VEA_003777 0afe78a7e4512adbbd28566defa7f486 326 Gene3D G3DSA:3.90.10.10 197 294 1.8E-7 T 13-10-2018 VEA_003777 0afe78a7e4512adbbd28566defa7f486 326 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 251 286 9.6E-12 T 13-10-2018 IPR010177 Doubled CXXCH motif VEA_003777 0afe78a7e4512adbbd28566defa7f486 326 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 90 147 3.0E-7 T 13-10-2018 IPR010177 Doubled CXXCH motif VEA_003777 0afe78a7e4512adbbd28566defa7f486 326 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 161 193 2.9E-5 T 13-10-2018 IPR010177 Doubled CXXCH motif VEA_003777 0afe78a7e4512adbbd28566defa7f486 326 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 204 244 8.3E-11 T 13-10-2018 IPR010177 Doubled CXXCH motif VEA_003777 0afe78a7e4512adbbd28566defa7f486 326 Gene3D G3DSA:1.10.1130.10 32 162 2.3E-9 T 13-10-2018 VEA_003777 0afe78a7e4512adbbd28566defa7f486 326 TIGRFAM TIGR01905 paired_CXXCH_1: doubled CXXCH domain 211 243 4.9E-7 T 13-10-2018 IPR010177 Doubled CXXCH motif VEA_003777 0afe78a7e4512adbbd28566defa7f486 326 TIGRFAM TIGR01905 paired_CXXCH_1: doubled CXXCH domain 251 286 2.9E-11 T 13-10-2018 IPR010177 Doubled CXXCH motif VEA_001072 c6955d60851061e52a4b7bcf25b3a9f3 254 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_001072 c6955d60851061e52a4b7bcf25b3a9f3 254 Gene3D G3DSA:3.40.50.300 1 253 2.0E-71 T 13-10-2018 VEA_001072 c6955d60851061e52a4b7bcf25b3a9f3 254 SUPERFAMILY SSF52540 2 227 5.03E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001072 c6955d60851061e52a4b7bcf25b3a9f3 254 SMART SM00382 26 213 2.0E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_001072 c6955d60851061e52a4b7bcf25b3a9f3 254 Pfam PF00005 ABC transporter 19 165 1.7E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_000195 04895c408cbdbd0165dbec293345c551 179 Gene3D G3DSA:1.20.950.20 2 79 6.7E-6 T 13-10-2018 VEA_000195 04895c408cbdbd0165dbec293345c551 179 SUPERFAMILY SSF81342 4 175 2.2E-35 T 13-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 VEA_000195 04895c408cbdbd0165dbec293345c551 179 Pfam PF01292 Prokaryotic cytochrome b561 8 176 1.2E-31 T 13-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 VEA_002200 2f5a81fc0974c903f944961038ad1dd2 209 Gene3D G3DSA:3.30.420.10 23 201 1.2E-33 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VEA_002200 2f5a81fc0974c903f944961038ad1dd2 209 Pfam PF00929 Exonuclease 31 193 7.5E-19 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VEA_002200 2f5a81fc0974c903f944961038ad1dd2 209 SUPERFAMILY SSF53098 27 198 2.48E-35 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VEA_002200 2f5a81fc0974c903f944961038ad1dd2 209 SMART SM00479 29 202 1.0E-26 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VEA_004232 10cab2cf4164cd02ddafcd58e63201c5 506 Gene3D G3DSA:1.10.10.10 5 112 5.7E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_004232 10cab2cf4164cd02ddafcd58e63201c5 506 Pfam PF00486 Transcriptional regulatory protein, C terminal 36 111 1.5E-11 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEA_004232 10cab2cf4164cd02ddafcd58e63201c5 506 SUPERFAMILY SSF46894 9 112 8.79E-15 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEA_004232 10cab2cf4164cd02ddafcd58e63201c5 506 SMART SM00862 31 111 8.6E-7 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEA_001052 4cf927a42dd182c7feb11b5daa276bf3 573 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 89 227 1.2E-9 T 13-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like VEA_003862 077e9baef7935461d28c32b8c3e5bff5 272 Pfam PF07103 Protein of unknown function (DUF1365) 9 245 6.2E-68 T 13-10-2018 IPR010775 Protein of unknown function DUF1365 VEA_004045 a70d08d42701f8aa8855771f75893ac7 435 SUPERFAMILY SSF102735 1 130 2.49E-41 T 13-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 VEA_004045 a70d08d42701f8aa8855771f75893ac7 435 SUPERFAMILY SSF54534 90 241 1.22E-36 T 13-10-2018 VEA_004045 a70d08d42701f8aa8855771f75893ac7 435 Gene3D G3DSA:3.30.70.1050 1 115 2.2E-41 T 13-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 VEA_004045 a70d08d42701f8aa8855771f75893ac7 435 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 233 1.0E-12 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VEA_004045 a70d08d42701f8aa8855771f75893ac7 435 TIGRFAM TIGR00115 tig: trigger factor 11 412 1.4E-144 T 13-10-2018 IPR005215 Trigger factor GO:0015031 VEA_004045 a70d08d42701f8aa8855771f75893ac7 435 Hamap MF_00303 Trigger factor [tig]. 1 418 22.044 T 13-10-2018 IPR005215 Trigger factor GO:0015031 VEA_004045 a70d08d42701f8aa8855771f75893ac7 435 Gene3D G3DSA:3.10.50.40 150 246 1.4E-107 T 13-10-2018 VEA_004045 a70d08d42701f8aa8855771f75893ac7 435 PIRSF PIRSF003095 1 434 6.3E-128 T 13-10-2018 IPR005215 Trigger factor GO:0015031 VEA_004045 a70d08d42701f8aa8855771f75893ac7 435 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 412 2.3E-40 T 13-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 VEA_004045 a70d08d42701f8aa8855771f75893ac7 435 SUPERFAMILY SSF109998 248 429 7.65E-49 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily VEA_004045 a70d08d42701f8aa8855771f75893ac7 435 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 9.1E-43 T 13-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 VEA_004045 a70d08d42701f8aa8855771f75893ac7 435 Gene3D G3DSA:1.10.3120.10 116 417 1.4E-107 T 13-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 VEA_002977 573cf054da1df573f6f7d5d99f241b8c 178 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 9 170 22.158 T 13-10-2018 IPR022920 Disulphide bond formation protein DsbB VEA_002977 573cf054da1df573f6f7d5d99f241b8c 178 Gene3D G3DSA:1.20.1550.10 3 176 4.6E-59 T 13-10-2018 IPR023380 DsbB-like superfamily VEA_002977 573cf054da1df573f6f7d5d99f241b8c 178 SUPERFAMILY SSF158442 17 163 1.44E-43 T 13-10-2018 IPR023380 DsbB-like superfamily VEA_002977 573cf054da1df573f6f7d5d99f241b8c 178 Pfam PF02600 Disulfide bond formation protein DsbB 14 162 6.4E-43 T 13-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 VEA_004179 5e57f70f8f81aaeb1b4accb01da38cdf 143 PIRSF PIRSF028687 1 143 3.1E-58 T 13-10-2018 IPR007293 Flagellar protein FlgP VEA_004179 5e57f70f8f81aaeb1b4accb01da38cdf 143 Pfam PF02169 LPP20 lipoprotein 20 118 1.1E-8 T 13-10-2018 IPR024952 Lipoprotein LPP20-like VEA_002935 5b931b17f5d99445dd61350d5708b80b 116 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 9 105 7.8E-46 T 13-10-2018 IPR004480 Monothiol glutaredoxin-related VEA_002935 5b931b17f5d99445dd61350d5708b80b 116 Gene3D G3DSA:3.40.30.10 6 111 9.8E-31 T 13-10-2018 VEA_002935 5b931b17f5d99445dd61350d5708b80b 116 PIRSF PIRSF005894 2 112 4.7E-53 T 13-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 VEA_002935 5b931b17f5d99445dd61350d5708b80b 116 Pfam PF00462 Glutaredoxin 21 85 5.0E-17 T 13-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VEA_002935 5b931b17f5d99445dd61350d5708b80b 116 SUPERFAMILY SSF52833 6 109 2.99E-34 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VEA_003302 0580ea5c1d5a10c2d7596ddb9be4f028 213 SUPERFAMILY SSF55186 84 210 1.01E-25 T 13-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 VEA_003302 0580ea5c1d5a10c2d7596ddb9be4f028 213 SMART SM00863 166 208 3.2E-6 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 VEA_003302 0580ea5c1d5a10c2d7596ddb9be4f028 213 Gene3D G3DSA:3.30.980.10 84 212 6.6E-27 T 13-10-2018 VEA_003302 0580ea5c1d5a10c2d7596ddb9be4f028 213 SUPERFAMILY SSF50447 1 83 7.77E-15 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VEA_003302 0580ea5c1d5a10c2d7596ddb9be4f028 213 Gene3D G3DSA:2.40.30.130 13 83 2.0E-16 T 13-10-2018 VEA_003302 0580ea5c1d5a10c2d7596ddb9be4f028 213 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 178 208 8.5E-6 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 VEA_003302 0580ea5c1d5a10c2d7596ddb9be4f028 213 Pfam PF01411 tRNA synthetases class II (A) 12 87 7.4E-8 T 13-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 VEA_003747 67820f98642d047bd705866e13e05d1b 443 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 443 267.261 T 13-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 VEA_003747 67820f98642d047bd705866e13e05d1b 443 SUPERFAMILY SSF53686 94 438 1.26E-52 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VEA_003747 67820f98642d047bd705866e13e05d1b 443 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 108 122 - T 13-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 VEA_003747 67820f98642d047bd705866e13e05d1b 443 Gene3D G3DSA:3.40.50.1100 116 238 3.9E-194 T 13-10-2018 VEA_003747 67820f98642d047bd705866e13e05d1b 443 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 88 396 2.0E-59 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VEA_003747 67820f98642d047bd705866e13e05d1b 443 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 10 438 1.4E-222 T 13-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 VEA_003747 67820f98642d047bd705866e13e05d1b 443 Gene3D G3DSA:3.40.50.1100 23 438 3.9E-194 T 13-10-2018 VEA_000832 b7a9255e7acedf39e1990972f641713f 331 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 4.9E-5 T 13-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 VEA_000832 b7a9255e7acedf39e1990972f641713f 331 PRINTS PR00183 E.coli/Salmonella-type porin signature 295 314 4.9E-5 T 13-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 VEA_000832 b7a9255e7acedf39e1990972f641713f 331 PRINTS PR00183 E.coli/Salmonella-type porin signature 93 115 4.9E-5 T 13-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 VEA_000832 b7a9255e7acedf39e1990972f641713f 331 Pfam PF00267 Gram-negative porin 48 331 2.7E-7 T 13-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 VEA_000832 b7a9255e7acedf39e1990972f641713f 331 SUPERFAMILY SSF56935 22 331 3.36E-43 T 13-10-2018 VEA_000832 b7a9255e7acedf39e1990972f641713f 331 Gene3D G3DSA:2.40.160.10 22 331 8.6E-45 T 13-10-2018 IPR023614 Porin domain superfamily VEA_000259 6866dbe0003424c1bcb3dad6e7d85167 142 Pfam PF03061 Thioesterase superfamily 59 109 1.8E-6 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 VEA_000259 6866dbe0003424c1bcb3dad6e7d85167 142 SUPERFAMILY SSF54637 13 137 2.3E-23 T 13-10-2018 IPR029069 HotDog domain superfamily VEA_000259 6866dbe0003424c1bcb3dad6e7d85167 142 Gene3D G3DSA:3.10.129.10 4 142 2.8E-25 T 13-10-2018 VEA_004382 89e6f50cff31305e6bc6f6a14be8970c 501 Gene3D G3DSA:1.10.3210.10 310 501 1.3E-57 T 13-10-2018 VEA_004382 89e6f50cff31305e6bc6f6a14be8970c 501 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 12 305 5.9E-101 T 13-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 VEA_004382 89e6f50cff31305e6bc6f6a14be8970c 501 SUPERFAMILY SSF109604 312 500 2.51E-47 T 13-10-2018 VEA_004382 89e6f50cff31305e6bc6f6a14be8970c 501 Gene3D G3DSA:3.30.420.150 116 294 5.1E-91 T 13-10-2018 VEA_004382 89e6f50cff31305e6bc6f6a14be8970c 501 Pfam PF02541 Ppx/GppA phosphatase family 25 307 1.4E-86 T 13-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 VEA_004382 89e6f50cff31305e6bc6f6a14be8970c 501 Gene3D G3DSA:3.30.420.40 13 302 5.1E-91 T 13-10-2018 VEA_004382 89e6f50cff31305e6bc6f6a14be8970c 501 SUPERFAMILY SSF53067 12 131 4.79E-36 T 13-10-2018 VEA_004382 89e6f50cff31305e6bc6f6a14be8970c 501 PIRSF PIRSF001267 2 501 5.7E-201 T 13-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 VEA_004382 89e6f50cff31305e6bc6f6a14be8970c 501 SUPERFAMILY SSF53067 136 308 9.29E-48 T 13-10-2018 VEA_003053 6c99bd70ebe165a6be7ceee5cfff7735 324 Pfam PF08908 Domain of unknown function (DUF1852) 1 321 3.2E-185 T 13-10-2018 IPR015004 Protein of unknown function DUF1852 VEA_003053 6c99bd70ebe165a6be7ceee5cfff7735 324 PIRSF PIRSF034367 1 324 5.5E-198 T 13-10-2018 IPR015004 Protein of unknown function DUF1852 VEA_001228 4cde50db8a67b7dea1977556befe874d 543 Gene3D G3DSA:3.40.50.300 288 542 4.0E-68 T 13-10-2018 VEA_001228 4cde50db8a67b7dea1977556befe874d 543 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 506 537 0.0013 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VEA_001228 4cde50db8a67b7dea1977556befe874d 543 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 265 7.7E-6 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VEA_001228 4cde50db8a67b7dea1977556befe874d 543 Pfam PF00005 ABC transporter 304 455 1.0E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_001228 4cde50db8a67b7dea1977556befe874d 543 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_001228 4cde50db8a67b7dea1977556befe874d 543 ProSitePatterns PS00211 ABC transporters family signature. 427 441 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_001228 4cde50db8a67b7dea1977556befe874d 543 SUPERFAMILY SSF52540 6 256 1.25E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001228 4cde50db8a67b7dea1977556befe874d 543 SUPERFAMILY SSF52540 295 526 6.51E-69 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001228 4cde50db8a67b7dea1977556befe874d 543 Gene3D G3DSA:3.40.50.300 4 286 5.0E-82 T 13-10-2018 VEA_001228 4cde50db8a67b7dea1977556befe874d 543 SMART SM00382 35 235 1.9E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_001228 4cde50db8a67b7dea1977556befe874d 543 SMART SM00382 312 504 7.3E-18 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_001228 4cde50db8a67b7dea1977556befe874d 543 Pfam PF00005 ABC transporter 26 185 1.4E-25 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_001064 f885dfbe3ce2270325c73d83ef987b09 401 Gene3D G3DSA:1.20.1250.20 2 387 1.9E-38 T 13-10-2018 VEA_001064 f885dfbe3ce2270325c73d83ef987b09 401 Pfam PF07690 Major Facilitator Superfamily 8 265 1.8E-20 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEA_001064 f885dfbe3ce2270325c73d83ef987b09 401 SUPERFAMILY SSF103473 5 386 2.49E-42 T 13-10-2018 IPR036259 MFS transporter superfamily VEA_003119 ba0b4c58f442cb1bcd0ee9131cd4ba7c 153 SUPERFAMILY SSF52833 20 145 3.02E-31 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VEA_003119 ba0b4c58f442cb1bcd0ee9131cd4ba7c 153 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 19 145 6.0E-40 T 13-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 VEA_003119 ba0b4c58f442cb1bcd0ee9131cd4ba7c 153 Pfam PF08534 Redoxin 19 132 4.1E-13 T 13-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 VEA_003119 ba0b4c58f442cb1bcd0ee9131cd4ba7c 153 Gene3D G3DSA:3.40.30.10 11 148 5.4E-31 T 13-10-2018 VEA_002721 bc7bd471bcb801da5be7ff2773397733 454 Pfam PF00209 Sodium:neurotransmitter symporter family 155 452 8.9E-26 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEA_002721 bc7bd471bcb801da5be7ff2773397733 454 Pfam PF00209 Sodium:neurotransmitter symporter family 10 132 8.4E-22 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEA_002721 bc7bd471bcb801da5be7ff2773397733 454 SUPERFAMILY SSF161070 10 453 2.35E-118 T 13-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 VEA_002721 bc7bd471bcb801da5be7ff2773397733 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 18 39 1.3E-10 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEA_002721 bc7bd471bcb801da5be7ff2773397733 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 314 333 1.3E-10 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEA_002721 bc7bd471bcb801da5be7ff2773397733 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 47 66 1.3E-10 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VEA_003751 8ba69fa3208f7d606a4b12e7925ade6f 165 Gene3D G3DSA:3.40.50.2300 1 136 2.9E-18 T 13-10-2018 VEA_003751 8ba69fa3208f7d606a4b12e7925ade6f 165 SUPERFAMILY SSF52172 1 139 8.68E-20 T 13-10-2018 IPR011006 CheY-like superfamily VEA_003751 8ba69fa3208f7d606a4b12e7925ade6f 165 Pfam PF00072 Response regulator receiver domain 6 125 1.4E-13 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_003751 8ba69fa3208f7d606a4b12e7925ade6f 165 SMART SM00448 4 125 1.5E-11 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_004069 07ae37c9d208411750badc0a01d60f82 568 Pfam PF00535 Glycosyl transferase family 2 8 127 2.7E-18 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VEA_004069 07ae37c9d208411750badc0a01d60f82 568 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 261 557 2.3E-15 T 13-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VEA_004069 07ae37c9d208411750badc0a01d60f82 568 SUPERFAMILY SSF53448 8 237 5.81E-33 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEA_004069 07ae37c9d208411750badc0a01d60f82 568 Gene3D G3DSA:3.90.550.10 7 216 1.3E-25 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEA_003671 84acb00c563423df590f3dd9041c8d5d 357 SUPERFAMILY SSF53850 25 355 1.81E-58 T 13-10-2018 VEA_003671 84acb00c563423df590f3dd9041c8d5d 357 Pfam PF13416 Bacterial extracellular solute-binding protein 46 317 5.8E-34 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein VEA_003671 84acb00c563423df590f3dd9041c8d5d 357 Gene3D G3DSA:3.40.190.10 30 335 1.2E-116 T 13-10-2018 VEA_003671 84acb00c563423df590f3dd9041c8d5d 357 Gene3D G3DSA:3.40.190.10 137 341 1.2E-116 T 13-10-2018 VEA_004099 7b4daf87eccb22928bfae28a267317c0 198 Pfam PF06185 YecM protein 14 196 1.1E-67 T 13-10-2018 IPR010393 Protein of unknown function DUF991 VEA_004099 7b4daf87eccb22928bfae28a267317c0 198 Gene3D G3DSA:3.10.180.10 6 198 7.0E-62 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEA_004099 7b4daf87eccb22928bfae28a267317c0 198 SUPERFAMILY SSF54593 2 197 1.46E-67 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEA_000505 cff34560e2b4f82197f44b8bbead6bc9 154 SUPERFAMILY SSF53927 8 142 3.81E-31 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VEA_000505 cff34560e2b4f82197f44b8bbead6bc9 154 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 67 99 - T 13-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VEA_000505 cff34560e2b4f82197f44b8bbead6bc9 154 Gene3D G3DSA:3.40.140.10 2 152 4.1E-40 T 13-10-2018 VEA_000505 cff34560e2b4f82197f44b8bbead6bc9 154 PIRSF PIRSF006019 1 147 1.8E-43 T 13-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 VEA_000505 cff34560e2b4f82197f44b8bbead6bc9 154 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 108 7.0E-25 T 13-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain VEA_003559 f3cb82c5e9fbeed3944709590b49d0a1 936 Pfam PF12531 DNA-K related protein 686 933 1.3E-101 T 13-10-2018 IPR021030 Protein of unknown function DUF3731 VEA_003559 f3cb82c5e9fbeed3944709590b49d0a1 936 SUPERFAMILY SSF53067 6 209 1.2E-29 T 13-10-2018 VEA_003559 f3cb82c5e9fbeed3944709590b49d0a1 936 Pfam PF00012 Hsp70 protein 83 316 3.0E-16 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEA_003559 f3cb82c5e9fbeed3944709590b49d0a1 936 PRINTS PR00301 70kDa heat shock protein signature 232 242 1.5E-9 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEA_003559 f3cb82c5e9fbeed3944709590b49d0a1 936 PRINTS PR00301 70kDa heat shock protein signature 165 185 1.5E-9 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEA_003559 f3cb82c5e9fbeed3944709590b49d0a1 936 PRINTS PR00301 70kDa heat shock protein signature 399 419 1.5E-9 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEA_003559 f3cb82c5e9fbeed3944709590b49d0a1 936 PRINTS PR00301 70kDa heat shock protein signature 6 19 1.5E-9 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEA_003559 f3cb82c5e9fbeed3944709590b49d0a1 936 SUPERFAMILY SSF53067 223 457 6.48E-21 T 13-10-2018 VEA_003126 6b1767d113be6f8b321e07b33345c188 360 Pfam PF07433 Protein of unknown function (DUF1513) 67 358 4.9E-112 T 13-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 VEA_003126 6b1767d113be6f8b321e07b33345c188 360 PIRSF PIRSF028101 4 360 3.6E-162 T 13-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 VEA_003126 6b1767d113be6f8b321e07b33345c188 360 SUPERFAMILY SSF50969 61 353 7.38E-10 T 13-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like VEA_002987 d8c7867f0c5039d1ae813b82bab329b3 504 Gene3D G3DSA:3.30.750.24 394 484 3.9E-27 T 13-10-2018 IPR036513 STAS domain superfamily VEA_002987 d8c7867f0c5039d1ae813b82bab329b3 504 Pfam PF01740 STAS domain 402 488 1.8E-6 T 13-10-2018 IPR002645 STAS domain VEA_002987 d8c7867f0c5039d1ae813b82bab329b3 504 Pfam PF00916 Sulfate permease family 1 359 2.5E-54 T 13-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VEA_002987 d8c7867f0c5039d1ae813b82bab329b3 504 SUPERFAMILY SSF52091 401 483 7.06E-12 T 13-10-2018 IPR036513 STAS domain superfamily VEA_001808 578d1c9078cffbadd026f835f212d16e 355 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 327 1.2E-100 T 13-10-2018 IPR016040 NAD(P)-binding domain VEA_001808 578d1c9078cffbadd026f835f212d16e 355 Gene3D G3DSA:3.40.50.720 3 326 6.6E-139 T 13-10-2018 VEA_001808 578d1c9078cffbadd026f835f212d16e 355 SUPERFAMILY SSF51735 2 338 1.84E-93 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_001808 578d1c9078cffbadd026f835f212d16e 355 Gene3D G3DSA:3.90.25.10 202 334 6.6E-139 T 13-10-2018 VEA_001808 578d1c9078cffbadd026f835f212d16e 355 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 3 340 1.4E-159 T 13-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 VEA_001453 d9c221a75867ac20f2325db517691f06 299 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 18 294 8.3E-99 T 13-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 VEA_001453 d9c221a75867ac20f2325db517691f06 299 Pfam PF01040 UbiA prenyltransferase family 32 279 6.3E-64 T 13-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 VEA_001453 d9c221a75867ac20f2325db517691f06 299 Gene3D G3DSA:1.10.357.140 22 182 4.9E-22 T 13-10-2018 VEA_001453 d9c221a75867ac20f2325db517691f06 299 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 15 296 19.454 T 13-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 VEA_001453 d9c221a75867ac20f2325db517691f06 299 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 70 92 - T 13-10-2018 IPR030470 UbiA prenyltransferase conserved site VEA_002153 99be647cf90aad10028e6eeb7d1a9857 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 61 1.7E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEA_002153 99be647cf90aad10028e6eeb7d1a9857 213 SUPERFAMILY SSF46689 5 80 3.64E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_002153 99be647cf90aad10028e6eeb7d1a9857 213 Gene3D G3DSA:1.10.357.10 56 210 1.4E-36 T 13-10-2018 VEA_002153 99be647cf90aad10028e6eeb7d1a9857 213 ProSitePatterns PS01081 TetR-type HTH domain signature. 31 61 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VEA_002153 99be647cf90aad10028e6eeb7d1a9857 213 Gene3D G3DSA:1.10.10.60 4 55 1.4E-23 T 13-10-2018 VEA_002408 473337f88bb88fa35323cc169c3feaf6 321 Gene3D G3DSA:1.20.58.1130 8 206 2.8E-86 T 13-10-2018 VEA_002408 473337f88bb88fa35323cc169c3feaf6 321 Pfam PF01699 Sodium/calcium exchanger protein 175 316 2.1E-28 T 13-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 VEA_002408 473337f88bb88fa35323cc169c3feaf6 321 Pfam PF01699 Sodium/calcium exchanger protein 5 143 3.7E-27 T 13-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 VEA_002408 473337f88bb88fa35323cc169c3feaf6 321 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 3 311 4.0E-82 T 13-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 VEA_002408 473337f88bb88fa35323cc169c3feaf6 321 Gene3D G3DSA:1.20.1420.30 35 308 2.8E-86 T 13-10-2018 VEA_004338 e6c9abf52fa88a2f2d2df26a60e8d7a6 283 SUPERFAMILY SSF52540 15 193 1.39E-15 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_004338 e6c9abf52fa88a2f2d2df26a60e8d7a6 283 Pfam PF13481 AAA domain 7 180 1.2E-29 T 13-10-2018 VEA_004338 e6c9abf52fa88a2f2d2df26a60e8d7a6 283 Gene3D G3DSA:3.40.50.300 2 273 9.0E-75 T 13-10-2018 VEA_003593 f8465e11a8f85260408d27fe2a82f959 158 SUPERFAMILY SSF143744 11 149 1.57E-25 T 13-10-2018 IPR038084 GlcG-like domain superfamily VEA_003593 f8465e11a8f85260408d27fe2a82f959 158 PIRSF PIRSF008757 1 158 9.2E-54 T 13-10-2018 IPR010371 Uncharacterised protein family UPF0303 VEA_003593 f8465e11a8f85260408d27fe2a82f959 158 Pfam PF03928 Haem-degrading 20 146 6.5E-30 T 13-10-2018 IPR005624 Haem-degrading VEA_003593 f8465e11a8f85260408d27fe2a82f959 158 Hamap MF_00761 UPF0303 protein . 2 153 29.889 T 13-10-2018 IPR010371 Uncharacterised protein family UPF0303 VEA_003593 f8465e11a8f85260408d27fe2a82f959 158 Gene3D G3DSA:3.30.450.150 1 157 5.7E-51 T 13-10-2018 IPR038084 GlcG-like domain superfamily VEA_003019 88f134f3d6aed9d4ef2336400b300ed8 226 Pfam PF02224 Cytidylate kinase 8 221 7.5E-78 T 13-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 VEA_003019 88f134f3d6aed9d4ef2336400b300ed8 226 SUPERFAMILY SSF52540 6 223 1.38E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003019 88f134f3d6aed9d4ef2336400b300ed8 226 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 34.471 T 13-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 VEA_003019 88f134f3d6aed9d4ef2336400b300ed8 226 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 5.3E-85 T 13-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 VEA_003019 88f134f3d6aed9d4ef2336400b300ed8 226 Gene3D G3DSA:3.40.50.300 1 226 1.6E-82 T 13-10-2018 VEA_002072 e3eca53a9f8261906abee2d2b5c93ead 646 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 143 594 6.8E-219 T 13-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 VEA_002072 e3eca53a9f8261906abee2d2b5c93ead 646 Pfam PF13667 ThiC-associated domain 22 104 1.1E-34 T 13-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 VEA_002072 e3eca53a9f8261906abee2d2b5c93ead 646 Gene3D G3DSA:3.20.20.540 214 527 2.3E-153 T 13-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 VEA_002072 e3eca53a9f8261906abee2d2b5c93ead 646 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 143 596 99.529 T 13-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 VEA_002072 e3eca53a9f8261906abee2d2b5c93ead 646 Pfam PF01964 Radical SAM ThiC family 144 592 9.1E-199 T 13-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 VEA_002297 699591b434c362d7ce9072621666aaeb 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 1.4E-42 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_002297 699591b434c362d7ce9072621666aaeb 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.818 T 13-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002297 699591b434c362d7ce9072621666aaeb 124 PIRSF PIRSF002133 1 124 3.0E-54 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_002297 699591b434c362d7ce9072621666aaeb 124 Gene3D G3DSA:2.40.50.140 1 124 6.1E-64 T 13-10-2018 VEA_002297 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 2.1E-60 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_002297 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 2.1E-60 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_002297 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 2.1E-60 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_002297 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 2.1E-60 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_002297 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 2.1E-60 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_002297 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 2.1E-60 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_002297 699591b434c362d7ce9072621666aaeb 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_002297 699591b434c362d7ce9072621666aaeb 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 8.5E-71 T 13-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002297 699591b434c362d7ce9072621666aaeb 124 SUPERFAMILY SSF50249 3 123 2.83E-52 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_002103 e4fa369ed39ec31d8d5984b2fd641867 393 SUPERFAMILY SSF48452 269 392 9.7E-11 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_002103 e4fa369ed39ec31d8d5984b2fd641867 393 SMART SM00028 327 360 0.0011 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_002103 e4fa369ed39ec31d8d5984b2fd641867 393 SUPERFAMILY SSF48452 86 362 3.96E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_002103 e4fa369ed39ec31d8d5984b2fd641867 393 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 2 386 1.8E-109 T 13-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 VEA_002103 e4fa369ed39ec31d8d5984b2fd641867 393 Gene3D G3DSA:1.25.40.10 204 393 5.9E-14 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_002103 e4fa369ed39ec31d8d5984b2fd641867 393 Pfam PF07219 HemY protein N-terminus 26 132 3.6E-26 T 13-10-2018 IPR010817 HemY, N-terminal VEA_000291 451acac019e36f36859cb0d6c80394c1 182 Gene3D G3DSA:3.40.630.30 2 169 2.9E-31 T 13-10-2018 VEA_000291 451acac019e36f36859cb0d6c80394c1 182 Pfam PF00583 Acetyltransferase (GNAT) family 49 141 4.3E-14 T 13-10-2018 IPR000182 GNAT domain VEA_000291 451acac019e36f36859cb0d6c80394c1 182 SUPERFAMILY SSF55729 1 154 2.57E-26 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_003023 6d5416197c688322868a868339d19b0c 373 SMART SM00028 198 231 21.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_003023 6d5416197c688322868a868339d19b0c 373 SMART SM00028 17 50 430.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_003023 6d5416197c688322868a868339d19b0c 373 SMART SM00028 164 197 0.088 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_003023 6d5416197c688322868a868339d19b0c 373 SMART SM00028 51 84 81.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_003023 6d5416197c688322868a868339d19b0c 373 Pfam PF13176 Tetratricopeptide repeat 53 76 0.019 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_003023 6d5416197c688322868a868339d19b0c 373 Gene3D G3DSA:1.25.40.10 158 334 8.2E-17 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_003023 6d5416197c688322868a868339d19b0c 373 Gene3D G3DSA:1.25.40.10 6 157 9.0E-14 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_003023 6d5416197c688322868a868339d19b0c 373 Pfam PF14559 Tetratricopeptide repeat 176 230 5.2E-6 T 13-10-2018 VEA_003023 6d5416197c688322868a868339d19b0c 373 SUPERFAMILY SSF81901 22 256 1.46E-20 T 13-10-2018 VEA_003023 6d5416197c688322868a868339d19b0c 373 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 1 371 32.982 T 13-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 VEA_004116 c39085bc793d31e35ec0fce8565b4c3a 70 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 7 64 2.9E-12 T 13-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEA_004116 c39085bc793d31e35ec0fce8565b4c3a 70 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 5 67 2.8E-18 T 13-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEA_004116 c39085bc793d31e35ec0fce8565b4c3a 70 Gene3D G3DSA:1.20.1300.10 1 70 4.3E-19 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEA_004116 c39085bc793d31e35ec0fce8565b4c3a 70 SUPERFAMILY SSF81343 4 70 1.5E-16 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEA_004116 c39085bc793d31e35ec0fce8565b4c3a 70 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 26 39 - T 13-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEA_004488 159fb46d943d2ce443271b7c3d425eff 260 Gene3D G3DSA:3.10.20.310 55 123 1.6E-24 T 13-10-2018 VEA_004488 159fb46d943d2ce443271b7c3d425eff 260 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 23 247 22.531 T 13-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 VEA_004488 159fb46d943d2ce443271b7c3d425eff 260 Pfam PF03799 Cell division protein FtsQ 127 239 7.5E-25 T 13-10-2018 IPR005548 Cell division protein FtsQ/DivIB VEA_004488 159fb46d943d2ce443271b7c3d425eff 260 Pfam PF08478 POTRA domain, FtsQ-type 54 123 3.9E-17 T 13-10-2018 IPR013685 POTRA domain, FtsQ-type VEA_004488 159fb46d943d2ce443271b7c3d425eff 260 Gene3D G3DSA:3.40.50.11690 125 252 2.5E-37 T 13-10-2018 VEA_002128 61175a9bcd7a5125fb032e8462a98dcc 405 SUPERFAMILY SSF103473 9 399 1.7E-32 T 13-10-2018 IPR036259 MFS transporter superfamily VEA_002128 61175a9bcd7a5125fb032e8462a98dcc 405 Gene3D G3DSA:1.20.1250.20 208 402 3.6E-11 T 13-10-2018 VEA_002128 61175a9bcd7a5125fb032e8462a98dcc 405 Gene3D G3DSA:1.20.1250.20 8 201 1.9E-14 T 13-10-2018 VEA_002128 61175a9bcd7a5125fb032e8462a98dcc 405 Pfam PF07690 Major Facilitator Superfamily 18 338 5.4E-19 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEA_002515 d11d18004c320bc9ee473c29b8b049fa 307 Gene3D G3DSA:3.10.350.10 35 100 1.0E-11 T 13-10-2018 IPR036779 LysM domain superfamily VEA_002515 d11d18004c320bc9ee473c29b8b049fa 307 Pfam PF01551 Peptidase family M23 208 302 2.6E-31 T 13-10-2018 IPR016047 Peptidase M23 VEA_002515 d11d18004c320bc9ee473c29b8b049fa 307 Gene3D G3DSA:2.70.70.10 141 307 8.2E-38 T 13-10-2018 IPR011055 Duplicated hybrid motif VEA_002515 d11d18004c320bc9ee473c29b8b049fa 307 SUPERFAMILY SSF51261 48 306 6.28E-52 T 13-10-2018 IPR011055 Duplicated hybrid motif VEA_002515 d11d18004c320bc9ee473c29b8b049fa 307 Pfam PF01476 LysM domain 49 91 5.1E-11 T 13-10-2018 IPR018392 LysM domain VEA_002515 d11d18004c320bc9ee473c29b8b049fa 307 SMART SM00257 48 92 1.1E-10 T 13-10-2018 IPR018392 LysM domain VEA_000098 03c969f24b6293505332f8e6636a1317 231 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 230 1.3E-75 T 13-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 VEA_000098 03c969f24b6293505332f8e6636a1317 231 Gene3D G3DSA:3.40.50.1860 104 215 1.6E-86 T 13-10-2018 VEA_000098 03c969f24b6293505332f8e6636a1317 231 SUPERFAMILY SSF53681 118 229 2.62E-34 T 13-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VEA_000098 03c969f24b6293505332f8e6636a1317 231 Gene3D G3DSA:3.40.50.1860 4 224 1.6E-86 T 13-10-2018 VEA_000098 03c969f24b6293505332f8e6636a1317 231 SUPERFAMILY SSF53681 1 116 2.01E-37 T 13-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VEA_000098 03c969f24b6293505332f8e6636a1317 231 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 79 88 - T 13-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VEA_000098 03c969f24b6293505332f8e6636a1317 231 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 224 1.8E-60 T 13-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VEA_002070 d9ecd85e6b9a525c2d8187e70b386c6c 460 SUPERFAMILY SSF49503 33 155 8.1E-39 T 13-10-2018 IPR008972 Cupredoxin VEA_002070 d9ecd85e6b9a525c2d8187e70b386c6c 460 ProSitePatterns PS00080 Multicopper oxidases signature 2. 442 453 - T 13-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 VEA_002070 d9ecd85e6b9a525c2d8187e70b386c6c 460 Gene3D G3DSA:2.60.40.420 10 153 5.4E-45 T 13-10-2018 IPR008972 Cupredoxin VEA_002070 d9ecd85e6b9a525c2d8187e70b386c6c 460 SUPERFAMILY SSF49503 311 459 3.06E-33 T 13-10-2018 IPR008972 Cupredoxin VEA_002070 d9ecd85e6b9a525c2d8187e70b386c6c 460 Pfam PF07732 Multicopper oxidase 45 156 6.3E-38 T 13-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 VEA_002070 d9ecd85e6b9a525c2d8187e70b386c6c 460 Pfam PF00394 Multicopper oxidase 202 281 1.9E-8 T 13-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 VEA_002070 d9ecd85e6b9a525c2d8187e70b386c6c 460 Gene3D G3DSA:2.60.40.420 160 302 1.1E-22 T 13-10-2018 IPR008972 Cupredoxin VEA_002070 d9ecd85e6b9a525c2d8187e70b386c6c 460 Pfam PF07731 Multicopper oxidase 365 459 1.4E-25 T 13-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 VEA_002070 d9ecd85e6b9a525c2d8187e70b386c6c 460 SUPERFAMILY SSF49503 158 280 5.92E-18 T 13-10-2018 IPR008972 Cupredoxin VEA_002070 d9ecd85e6b9a525c2d8187e70b386c6c 460 Gene3D G3DSA:2.60.40.420 308 460 2.8E-36 T 13-10-2018 IPR008972 Cupredoxin VEA_001825 3f96ed9ed48d9a7b9c0be2567f7f5a46 316 PIRSF PIRSF026649 6 312 1.0E-80 T 13-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VEA_001825 3f96ed9ed48d9a7b9c0be2567f7f5a46 316 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 8 313 43.927 T 13-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 VEA_001825 3f96ed9ed48d9a7b9c0be2567f7f5a46 316 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 9 303 3.2E-72 T 13-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VEA_001825 3f96ed9ed48d9a7b9c0be2567f7f5a46 316 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 9 308 2.5E-133 T 13-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 VEA_002119 63efc1889b74baed7c7fb9a53b8e08c3 120 Gene3D G3DSA:3.10.590.10 1 117 6.9E-46 T 13-10-2018 VEA_002119 63efc1889b74baed7c7fb9a53b8e08c3 120 SUPERFAMILY SSF88697 2 113 6.89E-44 T 13-10-2018 IPR015947 PUA-like superfamily VEA_002119 63efc1889b74baed7c7fb9a53b8e08c3 120 Pfam PF01878 EVE domain 1 111 6.9E-39 T 13-10-2018 IPR002740 EVE domain VEA_000630 42c8374686e69da0f2e1921b719ff39b 185 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 28 151 1.4E-30 T 13-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VEA_003354 5347c1a549d7b80661567741e129414f 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 243 5.8E-55 T 13-10-2018 VEA_003354 5347c1a549d7b80661567741e129414f 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 3.9E-6 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_003354 5347c1a549d7b80661567741e129414f 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 3.9E-6 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_003354 5347c1a549d7b80661567741e129414f 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 3.9E-6 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_003354 5347c1a549d7b80661567741e129414f 247 Gene3D G3DSA:3.40.50.720 1 245 7.8E-69 T 13-10-2018 VEA_003354 5347c1a549d7b80661567741e129414f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.2E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_003354 5347c1a549d7b80661567741e129414f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.2E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_003354 5347c1a549d7b80661567741e129414f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 1.2E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_003354 5347c1a549d7b80661567741e129414f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.2E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_003354 5347c1a549d7b80661567741e129414f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.2E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_003354 5347c1a549d7b80661567741e129414f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.2E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_003354 5347c1a549d7b80661567741e129414f 247 SUPERFAMILY SSF51735 3 246 1.88E-72 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_000395 4df2e3949db18bd02199cad281b0cb66 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 243 1.3E-70 T 13-10-2018 VEA_000395 4df2e3949db18bd02199cad281b0cb66 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 7.1E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000395 4df2e3949db18bd02199cad281b0cb66 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 7.1E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000395 4df2e3949db18bd02199cad281b0cb66 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 7.1E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000395 4df2e3949db18bd02199cad281b0cb66 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VEA_000395 4df2e3949db18bd02199cad281b0cb66 252 Gene3D G3DSA:3.40.50.720 1 248 8.9E-83 T 13-10-2018 VEA_000395 4df2e3949db18bd02199cad281b0cb66 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 2.5E-45 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000395 4df2e3949db18bd02199cad281b0cb66 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 2.5E-45 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000395 4df2e3949db18bd02199cad281b0cb66 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 2.5E-45 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000395 4df2e3949db18bd02199cad281b0cb66 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.5E-45 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000395 4df2e3949db18bd02199cad281b0cb66 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 2.5E-45 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000395 4df2e3949db18bd02199cad281b0cb66 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.5E-45 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000395 4df2e3949db18bd02199cad281b0cb66 252 SUPERFAMILY SSF51735 5 244 2.28E-82 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_001698 fa39d2fa85e508f0cd7070091c97bc53 99 Pfam PF10795 Protein of unknown function (DUF2607) 3 97 3.5E-27 T 13-10-2018 IPR019731 Protein of unknown function DUF2607 VEA_002924 22b803385988c9574184d2a4d170df3e 332 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 332 46.413 T 13-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 VEA_002924 22b803385988c9574184d2a4d170df3e 332 Pfam PF04245 37-kD nucleoid-associated bacterial protein 9 326 1.6E-99 T 13-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 VEA_001297 ddbd0b5ef6988522efa4fe3526c6b84a 681 Pfam PF02378 Phosphotransferase system, EIIC 48 330 6.5E-16 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VEA_001297 ddbd0b5ef6988522efa4fe3526c6b84a 681 Gene3D G3DSA:3.20.20.450 432 679 1.1E-63 T 13-10-2018 IPR035919 EAL domain superfamily VEA_001297 ddbd0b5ef6988522efa4fe3526c6b84a 681 Pfam PF00563 EAL domain 441 670 1.1E-55 T 13-10-2018 IPR001633 EAL domain VEA_001297 ddbd0b5ef6988522efa4fe3526c6b84a 681 SUPERFAMILY SSF141868 439 678 1.83E-63 T 13-10-2018 IPR035919 EAL domain superfamily VEA_001297 ddbd0b5ef6988522efa4fe3526c6b84a 681 SMART SM00052 433 675 3.0E-49 T 13-10-2018 IPR001633 EAL domain VEA_001492 b8b4ad5f8aba0ef2b6aebdcb397e3dae 758 SUPERFAMILY SSF52540 21 267 4.81E-9 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001492 b8b4ad5f8aba0ef2b6aebdcb397e3dae 758 Gene3D G3DSA:3.40.50.300 31 136 1.7E-5 T 13-10-2018 VEA_001492 b8b4ad5f8aba0ef2b6aebdcb397e3dae 758 Pfam PF07693 KAP family P-loop domain 26 352 1.3E-34 T 13-10-2018 IPR011646 KAP family P-loop domain VEA_000791 4192b6669fd7d42e276292683c0713b7 184 Pfam PF12464 Maltose acetyltransferase 6 55 2.3E-10 T 13-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 VEA_000791 4192b6669fd7d42e276292683c0713b7 184 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 126 159 2.5E-9 T 13-10-2018 IPR001451 Hexapeptide repeat VEA_000791 4192b6669fd7d42e276292683c0713b7 184 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 135 163 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VEA_000791 4192b6669fd7d42e276292683c0713b7 184 SUPERFAMILY SSF51161 3 183 7.21E-44 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily VEA_000791 4192b6669fd7d42e276292683c0713b7 184 Gene3D G3DSA:2.160.10.10 1 184 1.4E-63 T 13-10-2018 VEA_000791 4192b6669fd7d42e276292683c0713b7 184 SMART SM01266 4 56 1.8E-13 T 13-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 VEA_000386 1911a3a0c21098eac1f819161042ed65 471 Gene3D G3DSA:1.10.10.10 1 67 2.8E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000386 1911a3a0c21098eac1f819161042ed65 471 SUPERFAMILY SSF46785 3 69 1.11E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000386 1911a3a0c21098eac1f819161042ed65 471 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 7.0E-14 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_000386 1911a3a0c21098eac1f819161042ed65 471 Gene3D G3DSA:3.40.640.10 141 360 1.9E-96 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_000386 1911a3a0c21098eac1f819161042ed65 471 SUPERFAMILY SSF53383 94 468 5.51E-93 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_000386 1911a3a0c21098eac1f819161042ed65 471 SMART SM00345 7 66 4.5E-13 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_000386 1911a3a0c21098eac1f819161042ed65 471 Gene3D G3DSA:3.90.1150.10 98 465 1.9E-96 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEA_000386 1911a3a0c21098eac1f819161042ed65 471 Pfam PF00155 Aminotransferase class I and II 147 446 3.2E-35 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VEA_002841 22a447de37c1501f9c413043173fb3fa 205 SUPERFAMILY SSF52540 2 189 1.66E-38 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002841 22a447de37c1501f9c413043173fb3fa 205 Pfam PF00005 ABC transporter 18 158 4.0E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_002841 22a447de37c1501f9c413043173fb3fa 205 SMART SM00382 26 205 1.5E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_002841 22a447de37c1501f9c413043173fb3fa 205 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 203 1.4E-77 T 13-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 VEA_002841 22a447de37c1501f9c413043173fb3fa 205 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_002841 22a447de37c1501f9c413043173fb3fa 205 Gene3D G3DSA:3.40.50.300 1 201 3.1E-41 T 13-10-2018 VEA_000381 eb747b6c4d86398168f96ca55a958fcc 309 Pfam PF00682 HMGL-like 14 283 4.1E-52 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 VEA_000381 eb747b6c4d86398168f96ca55a958fcc 309 Gene3D G3DSA:3.20.20.70 8 305 1.5E-128 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_000381 eb747b6c4d86398168f96ca55a958fcc 309 SUPERFAMILY SSF51569 11 300 1.83E-73 T 13-10-2018 VEA_000563 24bc15fdd0b2d18edcf491b8517f0a12 407 Gene3D G3DSA:2.40.30.170 282 330 3.5E-18 T 13-10-2018 VEA_000563 24bc15fdd0b2d18edcf491b8517f0a12 407 SUPERFAMILY SSF111369 63 157 6.15E-8 T 13-10-2018 VEA_000563 24bc15fdd0b2d18edcf491b8517f0a12 407 Gene3D G3DSA:2.40.50.100 249 281 3.5E-18 T 13-10-2018 VEA_000563 24bc15fdd0b2d18edcf491b8517f0a12 407 Gene3D G3DSA:2.40.50.100 71 98 3.0E-11 T 13-10-2018 VEA_000563 24bc15fdd0b2d18edcf491b8517f0a12 407 Gene3D G3DSA:1.10.287.470 99 160 3.0E-11 T 13-10-2018 VEA_000563 24bc15fdd0b2d18edcf491b8517f0a12 407 Gene3D G3DSA:1.10.287.470 189 248 3.5E-18 T 13-10-2018 VEA_000563 24bc15fdd0b2d18edcf491b8517f0a12 407 SUPERFAMILY SSF111369 199 293 1.96E-7 T 13-10-2018 VEA_000563 24bc15fdd0b2d18edcf491b8517f0a12 407 Pfam PF13533 Biotin-lipoyl like 72 109 1.2E-11 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VEA_001073 592339d0dd28a0c729fb78d8c4e0f16f 628 Gene3D G3DSA:3.30.450.20 53 269 8.7E-29 T 13-10-2018 VEA_001073 592339d0dd28a0c729fb78d8c4e0f16f 628 Pfam PF02743 Cache domain 42 257 1.7E-23 T 13-10-2018 IPR033479 Double Cache domain 1 VEA_001073 592339d0dd28a0c729fb78d8c4e0f16f 628 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 429 594 2.4E-40 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_001073 592339d0dd28a0c729fb78d8c4e0f16f 628 SUPERFAMILY SSF58104 318 627 5.49E-77 T 13-10-2018 VEA_001073 592339d0dd28a0c729fb78d8c4e0f16f 628 SMART SM00304 296 350 1.6E-12 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_001073 592339d0dd28a0c729fb78d8c4e0f16f 628 Gene3D G3DSA:3.30.450.20 66 171 8.7E-29 T 13-10-2018 VEA_001073 592339d0dd28a0c729fb78d8c4e0f16f 628 Pfam PF00672 HAMP domain 300 347 8.8E-9 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_001073 592339d0dd28a0c729fb78d8c4e0f16f 628 SMART SM00283 365 626 2.4E-71 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_001073 592339d0dd28a0c729fb78d8c4e0f16f 628 Gene3D G3DSA:1.10.287.950 296 628 6.1E-75 T 13-10-2018 VEA_001144 65c48d69d0d411a0ce57021f254e3c18 67 Pfam PF07869 Protein of unknown function (DUF1656) 4 58 8.7E-16 T 13-10-2018 IPR012451 Protein of unknown function DUF1656 VEA_004106 a053f66ea8a08a78821fb39e0334ec66 295 PRINTS PR00690 Adhesin family signature 63 80 1.0E-8 T 13-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 VEA_004106 a053f66ea8a08a78821fb39e0334ec66 295 PRINTS PR00690 Adhesin family signature 179 200 1.0E-8 T 13-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 VEA_004106 a053f66ea8a08a78821fb39e0334ec66 295 PRINTS PR00690 Adhesin family signature 50 63 1.0E-8 T 13-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 VEA_004106 a053f66ea8a08a78821fb39e0334ec66 295 PRINTS PR00690 Adhesin family signature 232 250 1.0E-8 T 13-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 VEA_004106 a053f66ea8a08a78821fb39e0334ec66 295 Gene3D G3DSA:3.40.50.1980 21 179 1.0E-49 T 13-10-2018 VEA_004106 a053f66ea8a08a78821fb39e0334ec66 295 Gene3D G3DSA:3.40.50.1980 180 293 2.3E-41 T 13-10-2018 VEA_004106 a053f66ea8a08a78821fb39e0334ec66 295 Pfam PF01297 Zinc-uptake complex component A periplasmic 22 289 1.9E-61 T 13-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 VEA_004106 a053f66ea8a08a78821fb39e0334ec66 295 SUPERFAMILY SSF53807 12 291 1.47E-77 T 13-10-2018 VEA_002092 650379a3fb3270df25c5e2b7ddfb15f5 611 SUPERFAMILY SSF52540 16 203 4.54E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002092 650379a3fb3270df25c5e2b7ddfb15f5 611 Gene3D G3DSA:1.10.10.10 409 519 5.7E-30 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_002092 650379a3fb3270df25c5e2b7ddfb15f5 611 Gene3D G3DSA:3.40.50.300 7 211 1.9E-82 T 13-10-2018 VEA_002092 650379a3fb3270df25c5e2b7ddfb15f5 611 SMART SM00956 414 517 8.9E-51 T 13-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 VEA_002092 650379a3fb3270df25c5e2b7ddfb15f5 611 SUPERFAMILY SSF47819 534 609 8.07E-26 T 13-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 VEA_002092 650379a3fb3270df25c5e2b7ddfb15f5 611 SMART SM00487 25 221 4.3E-30 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VEA_002092 650379a3fb3270df25c5e2b7ddfb15f5 611 SMART SM00341 533 611 1.2E-22 T 13-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 VEA_002092 650379a3fb3270df25c5e2b7ddfb15f5 611 Pfam PF16124 RecQ zinc-binding 346 407 5.7E-18 T 13-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain VEA_002092 650379a3fb3270df25c5e2b7ddfb15f5 611 Gene3D G3DSA:3.40.50.300 213 408 3.1E-60 T 13-10-2018 VEA_002092 650379a3fb3270df25c5e2b7ddfb15f5 611 Pfam PF00270 DEAD/DEAH box helicase 31 189 2.3E-19 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VEA_002092 650379a3fb3270df25c5e2b7ddfb15f5 611 Pfam PF00570 HRDC domain 537 603 2.3E-22 T 13-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 VEA_002092 650379a3fb3270df25c5e2b7ddfb15f5 611 Pfam PF00271 Helicase conserved C-terminal domain 229 333 7.0E-20 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_002092 650379a3fb3270df25c5e2b7ddfb15f5 611 Pfam PF09382 RQC domain 409 517 1.0E-36 T 13-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 VEA_002092 650379a3fb3270df25c5e2b7ddfb15f5 611 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 19 466 7.7E-190 T 13-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 VEA_002092 650379a3fb3270df25c5e2b7ddfb15f5 611 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 17 606 1.1E-253 T 13-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 VEA_002092 650379a3fb3270df25c5e2b7ddfb15f5 611 SUPERFAMILY SSF52540 211 459 3.42E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002092 650379a3fb3270df25c5e2b7ddfb15f5 611 SMART SM00490 253 334 3.6E-29 T 13-10-2018 IPR001650 Helicase, C-terminal VEA_002092 650379a3fb3270df25c5e2b7ddfb15f5 611 Gene3D G3DSA:1.10.150.80 526 610 3.7E-28 T 13-10-2018 VEA_000727 9d66dc895bb8abea38fcfa5b223366d2 599 Gene3D G3DSA:3.40.50.720 397 508 2.0E-9 T 13-10-2018 VEA_000727 9d66dc895bb8abea38fcfa5b223366d2 599 Pfam PF02254 TrkA-N domain 399 487 1.4E-7 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VEA_000727 9d66dc895bb8abea38fcfa5b223366d2 599 Pfam PF00999 Sodium/hydrogen exchanger family 16 386 1.2E-31 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VEA_000727 9d66dc895bb8abea38fcfa5b223366d2 599 SUPERFAMILY SSF51735 399 491 1.25E-7 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_000727 9d66dc895bb8abea38fcfa5b223366d2 599 Gene3D G3DSA:1.20.1530.20 6 388 5.9E-13 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily VEA_000231 96ae58f4e40483011eb398fb3a5d0446 207 SUPERFAMILY SSF47413 26 90 1.47E-14 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEA_000231 96ae58f4e40483011eb398fb3a5d0446 207 Gene3D G3DSA:1.10.260.40 26 92 2.5E-15 T 13-10-2018 VEA_000231 96ae58f4e40483011eb398fb3a5d0446 207 SUPERFAMILY SSF51182 97 204 7.08E-26 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily VEA_000231 96ae58f4e40483011eb398fb3a5d0446 207 Pfam PF01381 Helix-turn-helix 32 84 1.4E-11 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VEA_000231 96ae58f4e40483011eb398fb3a5d0446 207 SMART SM00530 31 86 1.3E-12 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VEA_000231 96ae58f4e40483011eb398fb3a5d0446 207 Gene3D G3DSA:2.60.120.10 93 205 2.2E-26 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VEA_000231 96ae58f4e40483011eb398fb3a5d0446 207 Pfam PF07883 Cupin domain 147 204 8.5E-11 T 13-10-2018 IPR013096 Cupin 2, conserved barrel VEA_000800 3b3e057e84554274faece7be4cf05447 423 Gene3D G3DSA:3.30.70.270 262 423 3.2E-50 T 13-10-2018 VEA_000800 3b3e057e84554274faece7be4cf05447 423 SUPERFAMILY SSF55073 271 423 5.26E-44 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_000800 3b3e057e84554274faece7be4cf05447 423 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 265 422 4.1E-47 T 13-10-2018 IPR000160 GGDEF domain VEA_000800 3b3e057e84554274faece7be4cf05447 423 Pfam PF03924 CHASE domain 81 166 2.6E-14 T 13-10-2018 IPR006189 CHASE domain VEA_000800 3b3e057e84554274faece7be4cf05447 423 SMART SM00267 252 422 9.4E-47 T 13-10-2018 IPR000160 GGDEF domain VEA_000800 3b3e057e84554274faece7be4cf05447 423 SMART SM01079 19 195 3.2E-24 T 13-10-2018 IPR006189 CHASE domain VEA_000800 3b3e057e84554274faece7be4cf05447 423 Pfam PF00990 Diguanylate cyclase, GGDEF domain 266 423 1.0E-42 T 13-10-2018 IPR000160 GGDEF domain VEA_004046 e8fc88c7f5d5d862577abef872d9c46b 601 SMART SM00388 372 440 3.7E-10 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_004046 e8fc88c7f5d5d862577abef872d9c46b 601 Pfam PF00512 His Kinase A (phospho-acceptor) domain 373 440 1.2E-11 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_004046 e8fc88c7f5d5d862577abef872d9c46b 601 PRINTS PR00344 Bacterial sensor protein C-terminal signature 577 590 2.6E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_004046 e8fc88c7f5d5d862577abef872d9c46b 601 PRINTS PR00344 Bacterial sensor protein C-terminal signature 524 538 2.6E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_004046 e8fc88c7f5d5d862577abef872d9c46b 601 PRINTS PR00344 Bacterial sensor protein C-terminal signature 553 571 2.6E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_004046 e8fc88c7f5d5d862577abef872d9c46b 601 PRINTS PR00344 Bacterial sensor protein C-terminal signature 542 552 2.6E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_004046 e8fc88c7f5d5d862577abef872d9c46b 601 Gene3D G3DSA:3.30.565.10 442 600 9.0E-34 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_004046 e8fc88c7f5d5d862577abef872d9c46b 601 Gene3D G3DSA:3.30.450.20 54 175 3.1E-82 T 13-10-2018 VEA_004046 e8fc88c7f5d5d862577abef872d9c46b 601 Gene3D G3DSA:3.30.450.20 41 279 3.1E-82 T 13-10-2018 VEA_004046 e8fc88c7f5d5d862577abef872d9c46b 601 Gene3D G3DSA:1.10.287.130 348 435 1.0E-19 T 13-10-2018 VEA_004046 e8fc88c7f5d5d862577abef872d9c46b 601 Pfam PF02743 Cache domain 35 219 8.1E-14 T 13-10-2018 IPR033479 Double Cache domain 1 VEA_004046 e8fc88c7f5d5d862577abef872d9c46b 601 SUPERFAMILY SSF55874 442 595 6.02E-31 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_004046 e8fc88c7f5d5d862577abef872d9c46b 601 SUPERFAMILY SSF103190 48 187 6.87E-30 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VEA_004046 e8fc88c7f5d5d862577abef872d9c46b 601 PIRSF PIRSF036431 1 600 2.7E-192 T 13-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) VEA_004046 e8fc88c7f5d5d862577abef872d9c46b 601 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 486 591 4.2E-15 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_004046 e8fc88c7f5d5d862577abef872d9c46b 601 SMART SM00387 483 593 6.7E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_004046 e8fc88c7f5d5d862577abef872d9c46b 601 SUPERFAMILY SSF47384 367 440 1.65E-12 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEA_002363 2ddf7653cb6960d2890c72290c1aff36 178 Pfam PF00436 Single-strand binding protein family 6 106 1.4E-43 T 13-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 VEA_002363 2ddf7653cb6960d2890c72290c1aff36 178 SUPERFAMILY SSF50249 4 178 2.19E-63 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_002363 2ddf7653cb6960d2890c72290c1aff36 178 Hamap MF_00984 Single-stranded DNA-binding protein. 6 118 39.802 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 VEA_002363 2ddf7653cb6960d2890c72290c1aff36 178 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 178 2.8E-63 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 VEA_002363 2ddf7653cb6960d2890c72290c1aff36 178 Gene3D G3DSA:2.40.50.140 2 145 8.2E-50 T 13-10-2018 VEA_002363 2ddf7653cb6960d2890c72290c1aff36 178 PIRSF PIRSF002070 2 176 2.2E-37 T 13-10-2018 VEA_003406 1493e742bbc0de50641b0a71fd4e0976 423 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 8 414 9.1E-118 T 13-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 VEA_003406 1493e742bbc0de50641b0a71fd4e0976 423 Gene3D G3DSA:1.20.1600.10 8 417 2.7E-79 T 13-10-2018 VEA_003406 1493e742bbc0de50641b0a71fd4e0976 423 Pfam PF02321 Outer membrane efflux protein 220 403 3.9E-25 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VEA_003406 1493e742bbc0de50641b0a71fd4e0976 423 Pfam PF02321 Outer membrane efflux protein 10 198 1.8E-27 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VEA_003406 1493e742bbc0de50641b0a71fd4e0976 423 SUPERFAMILY SSF56954 9 416 4.05E-86 T 13-10-2018 VEA_004210 80c410c79b7cbb36d160e24288756523 392 Gene3D G3DSA:3.50.50.60 5 339 1.2E-95 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_004210 80c410c79b7cbb36d160e24288756523 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 286 301 1.2E-17 T 13-10-2018 VEA_004210 80c410c79b7cbb36d160e24288756523 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 1.2E-17 T 13-10-2018 VEA_004210 80c410c79b7cbb36d160e24288756523 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 301 317 1.2E-17 T 13-10-2018 VEA_004210 80c410c79b7cbb36d160e24288756523 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 1.2E-17 T 13-10-2018 VEA_004210 80c410c79b7cbb36d160e24288756523 392 Gene3D G3DSA:3.30.9.50 80 275 1.2E-95 T 13-10-2018 VEA_004210 80c410c79b7cbb36d160e24288756523 392 SUPERFAMILY SSF51905 3 384 1.13E-54 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_004210 80c410c79b7cbb36d160e24288756523 392 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 391 3.4E-108 T 13-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 VEA_004210 80c410c79b7cbb36d160e24288756523 392 Pfam PF01494 FAD binding domain 4 341 3.6E-26 T 13-10-2018 IPR002938 FAD-binding domain GO:0071949 VEA_002017 1295c8da81e62b4c3dcf9f9b5a72bbc3 453 SUPERFAMILY SSF116878 120 453 5.1E-52 T 13-10-2018 VEA_002017 1295c8da81e62b4c3dcf9f9b5a72bbc3 453 Pfam PF12631 MnmE helical domain 122 450 1.1E-60 T 13-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 VEA_002017 1295c8da81e62b4c3dcf9f9b5a72bbc3 453 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 215 370 7.2E-23 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VEA_002017 1295c8da81e62b4c3dcf9f9b5a72bbc3 453 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 4 453 32.802 T 13-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 VEA_002017 1295c8da81e62b4c3dcf9f9b5a72bbc3 453 Gene3D G3DSA:1.20.120.430 121 453 2.6E-102 T 13-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 VEA_002017 1295c8da81e62b4c3dcf9f9b5a72bbc3 453 Pfam PF10396 GTP-binding protein TrmE N-terminus 5 119 2.4E-35 T 13-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 VEA_002017 1295c8da81e62b4c3dcf9f9b5a72bbc3 453 Pfam PF01926 50S ribosome-binding GTPase 217 306 1.2E-23 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 VEA_002017 1295c8da81e62b4c3dcf9f9b5a72bbc3 453 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 10 453 2.1E-99 T 13-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 VEA_002017 1295c8da81e62b4c3dcf9f9b5a72bbc3 453 SUPERFAMILY SSF52540 70 371 2.07E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002017 1295c8da81e62b4c3dcf9f9b5a72bbc3 453 Gene3D G3DSA:3.40.50.300 216 381 2.6E-102 T 13-10-2018 VEA_002017 1295c8da81e62b4c3dcf9f9b5a72bbc3 453 Gene3D G3DSA:3.30.1360.120 1 120 6.8E-39 T 13-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 VEA_003988 2df668432aee9033b37c6ba8bff71431 752 SMART SM00849 506 689 5.5E-8 T 13-10-2018 IPR001279 Metallo-beta-lactamase VEA_003988 2df668432aee9033b37c6ba8bff71431 752 Pfam PF03772 Competence protein 208 465 2.4E-55 T 13-10-2018 IPR004477 ComEC/Rec2-related protein VEA_003988 2df668432aee9033b37c6ba8bff71431 752 Pfam PF00753 Metallo-beta-lactamase superfamily 504 684 1.6E-8 T 13-10-2018 IPR001279 Metallo-beta-lactamase VEA_003988 2df668432aee9033b37c6ba8bff71431 752 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 230 406 2.3E-26 T 13-10-2018 IPR004477 ComEC/Rec2-related protein VEA_003988 2df668432aee9033b37c6ba8bff71431 752 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 132 717 4.1E-114 T 13-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 VEA_003988 2df668432aee9033b37c6ba8bff71431 752 SUPERFAMILY SSF56281 495 737 2.98E-39 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEA_003988 2df668432aee9033b37c6ba8bff71431 752 Gene3D G3DSA:3.60.15.10 494 734 5.3E-48 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEA_002080 f70592147e6cec52fa0747761a82a5ae 397 Gene3D G3DSA:1.20.1720.10 12 385 2.9E-88 T 13-10-2018 VEA_002080 f70592147e6cec52fa0747761a82a5ae 397 Pfam PF07690 Major Facilitator Superfamily 16 352 3.9E-46 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEA_002080 f70592147e6cec52fa0747761a82a5ae 397 SUPERFAMILY SSF103473 8 384 4.97E-58 T 13-10-2018 IPR036259 MFS transporter superfamily VEA_002080 f70592147e6cec52fa0747761a82a5ae 397 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 9 381 4.4E-70 T 13-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 VEA_002080 f70592147e6cec52fa0747761a82a5ae 397 ProSitePatterns PS00216 Sugar transport proteins signature 1. 65 81 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 VEA_000523 3f367265abbd13d6044085244daf5efe 300 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 108 274 3.0E-47 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VEA_000523 3f367265abbd13d6044085244daf5efe 300 PRINTS PR01755 Bacterial translocase SecF protein signature 225 240 2.2E-24 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VEA_000523 3f367265abbd13d6044085244daf5efe 300 PRINTS PR01755 Bacterial translocase SecF protein signature 145 159 2.2E-24 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VEA_000523 3f367265abbd13d6044085244daf5efe 300 PRINTS PR01755 Bacterial translocase SecF protein signature 34 49 2.2E-24 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VEA_000523 3f367265abbd13d6044085244daf5efe 300 PRINTS PR01755 Bacterial translocase SecF protein signature 193 211 2.2E-24 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VEA_000523 3f367265abbd13d6044085244daf5efe 300 SUPERFAMILY SSF82866 94 281 2.75E-34 T 13-10-2018 VEA_000523 3f367265abbd13d6044085244daf5efe 300 Gene3D G3DSA:1.20.1640.10 96 290 1.3E-7 T 13-10-2018 VEA_000523 3f367265abbd13d6044085244daf5efe 300 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 7 290 21.488 T 13-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 VEA_000523 3f367265abbd13d6044085244daf5efe 300 Pfam PF02355 Protein export membrane protein 100 278 3.1E-53 T 13-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VEA_000523 3f367265abbd13d6044085244daf5efe 300 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 35 276 2.9E-64 T 13-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 VEA_000523 3f367265abbd13d6044085244daf5efe 300 Pfam PF07549 SecD/SecF GG Motif 30 55 5.6E-9 T 13-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VEA_003606 b407851db3d3b12081c279b6132ccf84 553 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 84 540 4.1E-133 T 13-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VEA_003606 b407851db3d3b12081c279b6132ccf84 553 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 45 540 7.3E-168 T 13-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VEA_002576 6a2b5e6db9667383448375c2b9c9cd8d 343 SUPERFAMILY SSF50331 263 342 1.19E-8 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VEA_002576 6a2b5e6db9667383448375c2b9c9cd8d 343 SUPERFAMILY SSF52540 5 243 9.18E-81 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002576 6a2b5e6db9667383448375c2b9c9cd8d 343 Pfam PF08402 TOBE domain 276 341 1.3E-6 T 13-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VEA_002576 6a2b5e6db9667383448375c2b9c9cd8d 343 SMART SM00382 29 214 9.4E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_002576 6a2b5e6db9667383448375c2b9c9cd8d 343 Gene3D G3DSA:3.40.50.300 1 240 1.4E-75 T 13-10-2018 VEA_002576 6a2b5e6db9667383448375c2b9c9cd8d 343 Pfam PF00005 ABC transporter 20 164 5.9E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_002576 6a2b5e6db9667383448375c2b9c9cd8d 343 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_004520 89b2c2335d3fc7f9a9e162551c31003a 147 Pfam PF06853 Protein of unknown function (DUF1249) 27 139 1.4E-38 T 13-10-2018 IPR009659 Protein of unknown function DUF1249 VEA_000280 59ec1530c894481b1c5c8a795167fe59 176 Gene3D G3DSA:3.30.700.10 7 94 6.1E-12 T 13-10-2018 VEA_000280 59ec1530c894481b1c5c8a795167fe59 176 SUPERFAMILY SSF54523 7 107 5.1E-13 T 13-10-2018 VEA_000280 59ec1530c894481b1c5c8a795167fe59 176 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 7.1E-9 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEA_000280 59ec1530c894481b1c5c8a795167fe59 176 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEA_000280 59ec1530c894481b1c5c8a795167fe59 176 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 2.0E-7 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEA_002278 90f6bcc28ab9488af90875938c320c25 263 Gene3D G3DSA:3.10.180.50 3 239 2.8E-94 T 13-10-2018 VEA_002278 90f6bcc28ab9488af90875938c320c25 263 Pfam PF07063 Domain of unknown function (DUF1338) 137 261 3.5E-27 T 13-10-2018 IPR009770 Domain of unknown function DUF1338 VEA_002278 90f6bcc28ab9488af90875938c320c25 263 Pfam PF07063 Domain of unknown function (DUF1338) 31 115 7.7E-19 T 13-10-2018 IPR009770 Domain of unknown function DUF1338 VEA_002278 90f6bcc28ab9488af90875938c320c25 263 SMART SM01150 3 262 1.8E-116 T 13-10-2018 IPR009770 Domain of unknown function DUF1338 VEA_003367 a01d84965e9af6eecc7999620c5b4037 297 Gene3D G3DSA:1.10.150.630 174 261 1.8E-5 T 13-10-2018 VEA_003367 a01d84965e9af6eecc7999620c5b4037 297 SUPERFAMILY SSF140591 75 272 5.1E-49 T 13-10-2018 VEA_003367 a01d84965e9af6eecc7999620c5b4037 297 Pfam PF07201 HrpJ-like domain 60 226 4.3E-36 T 13-10-2018 IPR010812 Hypersensitivity response secretion-like, HrpJ GO:0009405|GO:0019867|GO:0046903 VEA_003367 a01d84965e9af6eecc7999620c5b4037 297 TIGRFAM TIGR02568 LcrE: type III secretion regulator YopN/LcrE/InvE/MxiC 37 285 3.6E-81 T 13-10-2018 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC GO:0009986|GO:0030254|GO:0050709 VEA_001007 9fc8bc92f0d3a8cb07240b044a5cd850 197 Gene3D G3DSA:2.30.30.60 124 176 1.9E-7 T 13-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily VEA_001007 9fc8bc92f0d3a8cb07240b044a5cd850 197 Pfam PF00924 Mechanosensitive ion channel 73 174 5.5E-12 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VEA_001007 9fc8bc92f0d3a8cb07240b044a5cd850 197 SUPERFAMILY SSF50182 109 175 7.52E-12 T 13-10-2018 IPR010920 LSM domain superfamily VEA_004404 aeb00db4daca5be9b3b83df7ebc65b26 333 Gene3D G3DSA:2.70.70.10 120 276 3.4E-43 T 13-10-2018 IPR011055 Duplicated hybrid motif VEA_004404 aeb00db4daca5be9b3b83df7ebc65b26 333 Pfam PF01551 Peptidase family M23 174 269 8.8E-31 T 13-10-2018 IPR016047 Peptidase M23 VEA_004404 aeb00db4daca5be9b3b83df7ebc65b26 333 SUPERFAMILY SSF51261 80 271 9.94E-54 T 13-10-2018 IPR011055 Duplicated hybrid motif VEA_004246 36090109f83afdbf5457e6a9a679353f 518 SMART SM00267 347 518 6.8E-34 T 13-10-2018 IPR000160 GGDEF domain VEA_004246 36090109f83afdbf5457e6a9a679353f 518 SUPERFAMILY SSF55073 363 515 8.63E-35 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_004246 36090109f83afdbf5457e6a9a679353f 518 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 358 515 9.7E-36 T 13-10-2018 IPR000160 GGDEF domain VEA_004246 36090109f83afdbf5457e6a9a679353f 518 Gene3D G3DSA:3.30.70.270 353 517 6.2E-41 T 13-10-2018 VEA_004246 36090109f83afdbf5457e6a9a679353f 518 Pfam PF00990 Diguanylate cyclase, GGDEF domain 360 514 1.1E-34 T 13-10-2018 IPR000160 GGDEF domain VEA_000880 0dbc8a847a753769f0451fc70fff6475 299 Pfam PF00892 EamA-like transporter family 9 135 4.1E-13 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEA_000880 0dbc8a847a753769f0451fc70fff6475 299 Pfam PF00892 EamA-like transporter family 153 283 1.0E-12 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEA_000880 0dbc8a847a753769f0451fc70fff6475 299 SUPERFAMILY SSF103481 42 138 1.28E-12 T 13-10-2018 VEA_000880 0dbc8a847a753769f0451fc70fff6475 299 SUPERFAMILY SSF103481 188 286 7.19E-12 T 13-10-2018 VEA_000185 7db3076274b2123fc77000413511e3e3 47 SUPERFAMILY SSF50182 1 46 3.49E-14 T 13-10-2018 IPR010920 LSM domain superfamily VEA_000185 7db3076274b2123fc77000413511e3e3 47 Pfam PF06004 Bacterial protein of unknown function (DUF903) 1 46 6.1E-18 T 13-10-2018 IPR010305 Protein of unknown function DUF903 VEA_000185 7db3076274b2123fc77000413511e3e3 47 Gene3D G3DSA:2.30.30.100 1 47 2.8E-17 T 13-10-2018 VEA_003878 7e51445b86749288171611f5863a930c 208 SUPERFAMILY SSF89392 30 207 1.8E-50 T 13-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX VEA_003878 7e51445b86749288171611f5863a930c 208 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 13 206 31.657 T 13-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 VEA_003878 7e51445b86749288171611f5863a930c 208 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 39 196 1.6E-55 T 13-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like VEA_003878 7e51445b86749288171611f5863a930c 208 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 12 207 9.6E-62 T 13-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 VEA_003878 7e51445b86749288171611f5863a930c 208 Gene3D G3DSA:2.50.20.10 25 207 3.6E-46 T 13-10-2018 VEA_002582 bcf9812b1d96b33f6e78e62faabe9b4e 331 SUPERFAMILY SSF52540 10 262 7.4E-60 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002582 bcf9812b1d96b33f6e78e62faabe9b4e 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 308 6.2E-17 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VEA_002582 bcf9812b1d96b33f6e78e62faabe9b4e 331 SMART SM00382 43 241 6.1E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_002582 bcf9812b1d96b33f6e78e62faabe9b4e 331 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_002582 bcf9812b1d96b33f6e78e62faabe9b4e 331 Pfam PF00005 ABC transporter 35 192 1.2E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_002582 bcf9812b1d96b33f6e78e62faabe9b4e 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 328 1.2E-22 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VEA_002582 bcf9812b1d96b33f6e78e62faabe9b4e 331 Gene3D G3DSA:3.40.50.300 8 331 8.7E-78 T 13-10-2018 VEA_000601 67cd6e118201a80e6d04d83bdbf90d58 479 Gene3D G3DSA:2.40.170.10 76 479 2.0E-141 T 13-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 VEA_000601 67cd6e118201a80e6d04d83bdbf90d58 479 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 84 475 4.0E-111 T 13-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 VEA_000601 67cd6e118201a80e6d04d83bdbf90d58 479 Pfam PF11471 Maltoporin periplasmic N-terminal extension 23 76 2.8E-10 T 13-10-2018 IPR021570 LamB-type porin N-terminal domain VEA_000601 67cd6e118201a80e6d04d83bdbf90d58 479 SUPERFAMILY SSF56935 78 479 1.83E-105 T 13-10-2018 VEA_000601 67cd6e118201a80e6d04d83bdbf90d58 479 Pfam PF02264 LamB porin 80 479 9.7E-97 T 13-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 VEA_004422 83151c744029396f73fa497014920730 86 Gene3D G3DSA:1.20.58.110 1 86 3.9E-30 T 13-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_004422 83151c744029396f73fa497014920730 86 Pfam PF01649 Ribosomal protein S20 2 84 5.4E-28 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_004422 83151c744029396f73fa497014920730 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 6.9E-32 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_004422 83151c744029396f73fa497014920730 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 3.0E-36 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_004422 83151c744029396f73fa497014920730 86 SUPERFAMILY SSF46992 3 86 1.1E-32 T 13-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_004422 83151c744029396f73fa497014920730 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.696 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_002646 247bf1ca369ca02ba0ea9acedbefcebf 422 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 18 60 1.4E-9 T 13-10-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal VEA_001784 188183ac76dc4d6449996a0ab7b36a74 260 Pfam PF01061 ABC-2 type transporter 15 222 7.9E-19 T 13-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 VEA_001784 188183ac76dc4d6449996a0ab7b36a74 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 142 166 1.5E-20 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VEA_001784 188183ac76dc4d6449996a0ab7b36a74 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 65 87 1.5E-20 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VEA_001784 188183ac76dc4d6449996a0ab7b36a74 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 179 198 1.5E-20 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VEA_001784 188183ac76dc4d6449996a0ab7b36a74 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 199 218 1.5E-20 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VEA_001784 188183ac76dc4d6449996a0ab7b36a74 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 34 55 1.5E-20 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VEA_001784 188183ac76dc4d6449996a0ab7b36a74 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 108 133 1.5E-20 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VEA_003639 04fc66390105f0ea917a75301f3c3156 363 Gene3D G3DSA:2.40.160.10 95 363 8.4E-10 T 13-10-2018 IPR023614 Porin domain superfamily VEA_003639 04fc66390105f0ea917a75301f3c3156 363 SUPERFAMILY SSF56935 27 363 3.97E-28 T 13-10-2018 VEA_000555 4b3197c4a5cd12b39749fc5be42fc0bd 218 SUPERFAMILY SSF50475 2 184 2.36E-53 T 13-10-2018 VEA_000555 4b3197c4a5cd12b39749fc5be42fc0bd 218 Gene3D G3DSA:2.30.110.10 2 217 1.1E-61 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VEA_000555 4b3197c4a5cd12b39749fc5be42fc0bd 218 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 21 162 8.4E-41 T 13-10-2018 IPR024747 Pyridoxamine 5'-phosphate oxidase-related VEA_003780 eac000e5bc35de1347195242bad8462c 400 Gene3D G3DSA:1.20.1720.10 17 396 9.6E-101 T 13-10-2018 VEA_003780 eac000e5bc35de1347195242bad8462c 400 SUPERFAMILY SSF103473 8 398 1.7E-64 T 13-10-2018 IPR036259 MFS transporter superfamily VEA_003780 eac000e5bc35de1347195242bad8462c 400 Pfam PF07690 Major Facilitator Superfamily 24 364 1.5E-49 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEA_003780 eac000e5bc35de1347195242bad8462c 400 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 13 395 1.0E-118 T 13-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 VEA_000388 6af2e467bcd1f1e606ebab823861542a 335 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 5 213 1.1E-43 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VEA_000388 6af2e467bcd1f1e606ebab823861542a 335 PIRSF PIRSF000267 1 335 1.3E-89 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VEA_000388 6af2e467bcd1f1e606ebab823861542a 335 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 324 3.2E-98 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VEA_000478 1a9dd560ece742fdaeeed629de9d5874 467 Hamap MF_01128 H(+)/Cl(-) exchange transporter ClcA [clcA]. 1 467 53.59 T 13-10-2018 IPR023861 Chloride channel, ClcA GO:0005887|GO:0006821|GO:0015108 VEA_000478 1a9dd560ece742fdaeeed629de9d5874 467 Pfam PF00654 Voltage gated chloride channel 88 435 8.5E-95 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 VEA_000478 1a9dd560ece742fdaeeed629de9d5874 467 SUPERFAMILY SSF81340 25 451 7.98E-114 T 13-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 VEA_000478 1a9dd560ece742fdaeeed629de9d5874 467 Gene3D G3DSA:1.10.3080.10 29 467 6.3E-143 T 13-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 VEA_000478 1a9dd560ece742fdaeeed629de9d5874 467 PRINTS PR00762 Chloride channel signature 181 200 3.6E-28 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 VEA_000478 1a9dd560ece742fdaeeed629de9d5874 467 PRINTS PR00762 Chloride channel signature 403 422 3.6E-28 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 VEA_000478 1a9dd560ece742fdaeeed629de9d5874 467 PRINTS PR00762 Chloride channel signature 350 370 3.6E-28 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 VEA_000478 1a9dd560ece742fdaeeed629de9d5874 467 PRINTS PR00762 Chloride channel signature 385 401 3.6E-28 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 VEA_000478 1a9dd560ece742fdaeeed629de9d5874 467 PRINTS PR00762 Chloride channel signature 100 117 3.6E-28 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 VEA_001754 ee7c227c11da518ed46edf47190f37a2 335 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 321 1.9E-128 T 13-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 VEA_001754 ee7c227c11da518ed46edf47190f37a2 335 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 329 2.9E-166 T 13-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 VEA_001754 ee7c227c11da518ed46edf47190f37a2 335 Gene3D G3DSA:3.40.190.90 109 276 4.9E-125 T 13-10-2018 VEA_001754 ee7c227c11da518ed46edf47190f37a2 335 PIRSF PIRSF004532 1 331 1.1E-134 T 13-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 VEA_001754 ee7c227c11da518ed46edf47190f37a2 335 SUPERFAMILY SSF56655 1 324 1.1E-106 T 13-10-2018 VEA_001754 ee7c227c11da518ed46edf47190f37a2 335 Gene3D G3DSA:3.30.540.10 7 319 4.9E-125 T 13-10-2018 VEA_002742 fc4d8f6e55e1991ef339393a8dd2b80f 256 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 63 77 - T 13-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEA_002742 fc4d8f6e55e1991ef339393a8dd2b80f 256 SUPERFAMILY SSF55120 11 252 2.56E-65 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEA_002742 fc4d8f6e55e1991ef339393a8dd2b80f 256 Gene3D G3DSA:3.30.2350.10 6 237 3.5E-62 T 13-10-2018 VEA_002742 fc4d8f6e55e1991ef339393a8dd2b80f 256 Pfam PF00849 RNA pseudouridylate synthase 24 183 6.1E-33 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEA_003579 1c7416be1b0cef32cecfaa53102e6b0d 293 Gene3D G3DSA:3.20.20.70 7 68 8.7E-12 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_003579 1c7416be1b0cef32cecfaa53102e6b0d 293 Gene3D G3DSA:3.20.20.70 69 284 8.0E-33 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_003579 1c7416be1b0cef32cecfaa53102e6b0d 293 PIRSF PIRSF000371 1 293 2.5E-93 T 13-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 VEA_003579 1c7416be1b0cef32cecfaa53102e6b0d 293 ProSitePatterns PS01087 Radical activating enzymes signature. 23 44 - T 13-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 VEA_003579 1c7416be1b0cef32cecfaa53102e6b0d 293 Pfam PF13353 4Fe-4S single cluster domain 21 145 2.2E-7 T 13-10-2018 VEA_003579 1c7416be1b0cef32cecfaa53102e6b0d 293 TIGRFAM TIGR04041 activase_YjjW: glycine radical enzyme activase, YjjW family 10 288 5.2E-125 T 13-10-2018 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW VEA_003579 1c7416be1b0cef32cecfaa53102e6b0d 293 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 51 62 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VEA_003579 1c7416be1b0cef32cecfaa53102e6b0d 293 Pfam PF04055 Radical SAM superfamily 29 229 2.4E-14 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VEA_003579 1c7416be1b0cef32cecfaa53102e6b0d 293 SUPERFAMILY SSF54862 28 143 3.6E-15 T 13-10-2018 VEA_000034 a0d2a398ff9ad48c44f01bf9c662fd3c 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.8E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000034 a0d2a398ff9ad48c44f01bf9c662fd3c 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.8E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000034 a0d2a398ff9ad48c44f01bf9c662fd3c 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.8E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000034 a0d2a398ff9ad48c44f01bf9c662fd3c 304 Gene3D G3DSA:3.40.190.290 95 300 2.6E-31 T 13-10-2018 VEA_000034 a0d2a398ff9ad48c44f01bf9c662fd3c 304 SUPERFAMILY SSF46785 4 114 2.38E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000034 a0d2a398ff9ad48c44f01bf9c662fd3c 304 Gene3D G3DSA:1.10.10.10 3 94 9.1E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000034 a0d2a398ff9ad48c44f01bf9c662fd3c 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.2E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000034 a0d2a398ff9ad48c44f01bf9c662fd3c 304 SUPERFAMILY SSF53850 93 301 1.71E-30 T 13-10-2018 VEA_000034 a0d2a398ff9ad48c44f01bf9c662fd3c 304 Pfam PF03466 LysR substrate binding domain 92 295 2.0E-29 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_004432 f00c9d5424e56e32406717b614e1e89e 226 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 226 147.386 T 13-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 VEA_004432 f00c9d5424e56e32406717b614e1e89e 226 Pfam PF02976 DNA mismatch repair enzyme MutH 53 151 2.2E-33 T 13-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 VEA_004432 f00c9d5424e56e32406717b614e1e89e 226 SMART SM00927 53 151 9.9E-64 T 13-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 VEA_004432 f00c9d5424e56e32406717b614e1e89e 226 SUPERFAMILY SSF52980 2 220 2.52E-81 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VEA_004432 f00c9d5424e56e32406717b614e1e89e 226 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 5 219 3.6E-101 T 13-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 VEA_004432 f00c9d5424e56e32406717b614e1e89e 226 Gene3D G3DSA:3.40.600.10 1 222 8.9E-56 T 13-10-2018 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily GO:0003677|GO:0004519 VEA_004373 993611bd855ba111242ad4f10154e96f 233 Pfam PF03466 LysR substrate binding domain 28 231 6.7E-38 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_004373 993611bd855ba111242ad4f10154e96f 233 Gene3D G3DSA:3.40.190.10 30 230 1.7E-55 T 13-10-2018 VEA_004373 993611bd855ba111242ad4f10154e96f 233 Gene3D G3DSA:3.40.190.10 100 201 1.7E-55 T 13-10-2018 VEA_004373 993611bd855ba111242ad4f10154e96f 233 SUPERFAMILY SSF53850 27 232 4.35E-35 T 13-10-2018 VEA_002295 43c4afffbfe49e1cdb518c6eb68162a7 118 Gene3D G3DSA:3.40.1260.10 1 118 1.5E-38 T 13-10-2018 IPR027396 DsrEFH-like VEA_002295 43c4afffbfe49e1cdb518c6eb68162a7 118 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 3 118 2.0E-46 T 13-10-2018 IPR017462 Sulphur relay, TusC/DsrF VEA_002295 43c4afffbfe49e1cdb518c6eb68162a7 118 Pfam PF02635 DsrE/DsrF-like family 4 118 2.8E-25 T 13-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein VEA_002295 43c4afffbfe49e1cdb518c6eb68162a7 118 SUPERFAMILY SSF75169 3 118 7.33E-36 T 13-10-2018 IPR027396 DsrEFH-like VEA_003442 398026b55d6ee9ac389e84abf0447d8f 57 Pfam PF04957 Ribosome modulation factor 1 54 3.3E-28 T 13-10-2018 IPR007040 Ribosome modulation factor VEA_003442 398026b55d6ee9ac389e84abf0447d8f 57 Gene3D G3DSA:1.10.10.620 1 57 4.0E-29 T 13-10-2018 IPR023200 Ribosome modulation factor domain superfamily VEA_003442 398026b55d6ee9ac389e84abf0447d8f 57 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 29.734 T 13-10-2018 IPR007040 Ribosome modulation factor VEA_003442 398026b55d6ee9ac389e84abf0447d8f 57 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 51 2.0E-22 T 13-10-2018 IPR007040 Ribosome modulation factor VEA_003937 f0738841ed27dbd99f61401f0e5f3748 263 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 3 259 40.284 T 13-10-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 VEA_003937 f0738841ed27dbd99f61401f0e5f3748 263 SUPERFAMILY SSF53335 7 251 2.63E-34 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_003937 f0738841ed27dbd99f61401f0e5f3748 263 Gene3D G3DSA:3.40.50.150 9 263 2.4E-56 T 13-10-2018 VEA_003937 f0738841ed27dbd99f61401f0e5f3748 263 Pfam PF08241 Methyltransferase domain 52 148 6.1E-14 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 VEA_000214 7280516323c412aec7913f62db407247 244 PIRSF PIRSF039085 4 243 7.3E-103 T 13-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VEA_000214 7280516323c412aec7913f62db407247 244 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_000214 7280516323c412aec7913f62db407247 244 Pfam PF00005 ABC transporter 23 167 2.7E-36 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_000214 7280516323c412aec7913f62db407247 244 Gene3D G3DSA:3.40.50.300 5 244 9.9E-78 T 13-10-2018 VEA_000214 7280516323c412aec7913f62db407247 244 SUPERFAMILY SSF52540 7 237 5.21E-78 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000214 7280516323c412aec7913f62db407247 244 SMART SM00382 32 215 2.7E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_001640 bdd09bd253795dc93057d88b6190d339 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 390 2.8E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_001640 bdd09bd253795dc93057d88b6190d339 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 430 2.8E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_001640 bdd09bd253795dc93057d88b6190d339 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 448 2.8E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_001640 bdd09bd253795dc93057d88b6190d339 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 404 2.8E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_001640 bdd09bd253795dc93057d88b6190d339 461 SUPERFAMILY SSF47384 214 295 2.55E-16 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEA_001640 bdd09bd253795dc93057d88b6190d339 461 SMART SM00387 339 451 1.4E-25 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_001640 bdd09bd253795dc93057d88b6190d339 461 SMART SM00388 230 296 1.9E-14 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_001640 bdd09bd253795dc93057d88b6190d339 461 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 448 6.2E-17 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_001640 bdd09bd253795dc93057d88b6190d339 461 SUPERFAMILY SSF55874 285 449 2.62E-33 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_001640 bdd09bd253795dc93057d88b6190d339 461 Gene3D G3DSA:3.30.565.10 299 452 9.3E-31 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_001640 bdd09bd253795dc93057d88b6190d339 461 SMART SM00304 176 229 2.0E-4 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_001640 bdd09bd253795dc93057d88b6190d339 461 Gene3D G3DSA:1.10.287.130 180 297 1.0E-19 T 13-10-2018 VEA_001640 bdd09bd253795dc93057d88b6190d339 461 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 7 448 4.3E-118 T 13-10-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 VEA_001640 bdd09bd253795dc93057d88b6190d339 461 Pfam PF00512 His Kinase A (phospho-acceptor) domain 231 295 1.3E-11 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_001764 8f5829cd34b0d54480156fe9a2450181 662 Gene3D G3DSA:3.40.50.720 146 268 1.0E-32 T 13-10-2018 VEA_001764 8f5829cd34b0d54480156fe9a2450181 662 Pfam PF02719 Polysaccharide biosynthesis protein 287 590 1.4E-129 T 13-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain VEA_001764 8f5829cd34b0d54480156fe9a2450181 662 Pfam PF13727 CoA-binding domain 71 242 1.2E-12 T 13-10-2018 VEA_001764 8f5829cd34b0d54480156fe9a2450181 662 SUPERFAMILY SSF51735 284 567 6.97E-50 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_001764 8f5829cd34b0d54480156fe9a2450181 662 SUPERFAMILY SSF53335 118 325 3.49E-16 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_001764 8f5829cd34b0d54480156fe9a2450181 662 Gene3D G3DSA:3.40.50.720 282 625 1.6E-113 T 13-10-2018 VEA_002864 ea00bc70a313c6d59072df33341ec33f 207 Pfam PF03458 UPF0126 domain 5 76 4.3E-19 T 13-10-2018 IPR005115 Uncharacterised domain UPF0126 VEA_002864 ea00bc70a313c6d59072df33341ec33f 207 Pfam PF03458 UPF0126 domain 92 163 3.7E-19 T 13-10-2018 IPR005115 Uncharacterised domain UPF0126 VEA_003073 4a7db44e77d2f0b8562fa914f6f300d1 98 Gene3D G3DSA:3.30.70.1060 1 98 7.4E-39 T 13-10-2018 VEA_003073 4a7db44e77d2f0b8562fa914f6f300d1 98 SUPERFAMILY SSF54909 1 98 5.18E-33 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel VEA_003073 4a7db44e77d2f0b8562fa914f6f300d1 98 Pfam PF03795 YCII-related domain 1 95 1.9E-29 T 13-10-2018 IPR005545 YCII-related VEA_001515 7bcbe8e8bed076e7169f95d56c1db88c 634 SUPERFAMILY SSF52540 239 619 2.62E-38 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001515 7bcbe8e8bed076e7169f95d56c1db88c 634 Gene3D G3DSA:3.40.50.300 240 429 8.5E-26 T 13-10-2018 VEA_001515 7bcbe8e8bed076e7169f95d56c1db88c 634 Pfam PF13245 AAA domain 251 410 1.0E-9 T 13-10-2018 VEA_001515 7bcbe8e8bed076e7169f95d56c1db88c 634 Pfam PF13538 UvrD-like helicase C-terminal domain 577 615 2.1E-7 T 13-10-2018 IPR027785 UvrD-like helicase C-terminal domain VEA_001515 7bcbe8e8bed076e7169f95d56c1db88c 634 Gene3D G3DSA:3.40.50.300 447 633 3.8E-13 T 13-10-2018 VEA_001515 7bcbe8e8bed076e7169f95d56c1db88c 634 Pfam PF08378 Nuclease-related domain 19 105 2.3E-8 T 13-10-2018 IPR011528 Nuclease-related domain, NERD VEA_001442 cfc18598dbcc09a057a2377c2baeea0b 210 Pfam PF01810 LysE type translocator 16 205 5.7E-28 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEA_001442 cfc18598dbcc09a057a2377c2baeea0b 210 PIRSF PIRSF006324 1 209 8.2E-59 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEA_001237 4d40fe103a73c7434c181b0ebcc61516 256 Gene3D G3DSA:3.30.70.20 60 136 1.5E-9 T 13-10-2018 VEA_001237 4d40fe103a73c7434c181b0ebcc61516 256 SUPERFAMILY SSF54862 63 209 1.44E-25 T 13-10-2018 VEA_001237 4d40fe103a73c7434c181b0ebcc61516 256 Gene3D G3DSA:3.30.70.20 138 223 3.8E-10 T 13-10-2018 VEA_001237 4d40fe103a73c7434c181b0ebcc61516 256 Pfam PF12800 4Fe-4S binding domain 141 159 0.027 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEA_001237 4d40fe103a73c7434c181b0ebcc61516 256 Pfam PF12800 4Fe-4S binding domain 188 200 0.81 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEA_001237 4d40fe103a73c7434c181b0ebcc61516 256 Pfam PF12838 4Fe-4S dicluster domain 64 119 1.1E-7 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEA_001237 4d40fe103a73c7434c181b0ebcc61516 256 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 11 42 9.4E-4 T 13-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VEA_001237 4d40fe103a73c7434c181b0ebcc61516 256 TIGRFAM TIGR00397 mauM_napG: MauM/NapG family ferredoxin-type protein 11 221 1.9E-77 T 13-10-2018 IPR004494 MauM/NapG ferredoxin-type protein VEA_001237 4d40fe103a73c7434c181b0ebcc61516 256 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 65 76 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VEA_001471 f429be0eb08d56f5f52826585d088902 358 SUPERFAMILY SSF50952 14 350 2.75E-38 T 13-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 VEA_001471 f429be0eb08d56f5f52826585d088902 358 Pfam PF07995 Glucose / Sorbosone dehydrogenase 30 353 1.3E-111 T 13-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase VEA_001471 f429be0eb08d56f5f52826585d088902 358 Gene3D G3DSA:2.120.10.30 15 358 2.1E-100 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like VEA_004473 651e7c61ccd9df764c5e3c6d0e18b6c0 274 Gene3D G3DSA:3.40.50.1980 21 139 9.7E-36 T 13-10-2018 VEA_004473 651e7c61ccd9df764c5e3c6d0e18b6c0 274 Gene3D G3DSA:3.40.50.1980 142 270 2.7E-30 T 13-10-2018 VEA_004473 651e7c61ccd9df764c5e3c6d0e18b6c0 274 SUPERFAMILY SSF53807 19 266 6.28E-59 T 13-10-2018 VEA_004473 651e7c61ccd9df764c5e3c6d0e18b6c0 274 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 1 271 51.292 T 13-10-2018 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 VEA_004473 651e7c61ccd9df764c5e3c6d0e18b6c0 274 Pfam PF01497 Periplasmic binding protein 25 246 3.2E-29 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain VEA_001732 98717f215155676eca4114be3006e924 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 1.5E-58 T 13-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 VEA_001732 98717f215155676eca4114be3006e924 123 Gene3D G3DSA:2.40.150.20 1 123 3.9E-56 T 13-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 VEA_001732 98717f215155676eca4114be3006e924 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 27.363 T 13-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VEA_001732 98717f215155676eca4114be3006e924 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 13-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_001732 98717f215155676eca4114be3006e924 123 SMART SM01374 1 123 1.3E-85 T 13-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VEA_001732 98717f215155676eca4114be3006e924 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 2.1E-54 T 13-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VEA_001732 98717f215155676eca4114be3006e924 123 SUPERFAMILY SSF50193 2 122 4.19E-51 T 13-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 VEA_001852 42bf1c6c67ad7b2961559e7443fc3578 608 Gene3D G3DSA:3.10.105.10 318 542 2.3E-43 T 13-10-2018 VEA_001852 42bf1c6c67ad7b2961559e7443fc3578 608 Gene3D G3DSA:3.40.190.10 19 317 5.5E-46 T 13-10-2018 VEA_001852 42bf1c6c67ad7b2961559e7443fc3578 608 SUPERFAMILY SSF53850 41 561 1.81E-96 T 13-10-2018 VEA_001852 42bf1c6c67ad7b2961559e7443fc3578 608 PIRSF PIRSF002741 1 563 4.6E-70 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VEA_001852 42bf1c6c67ad7b2961559e7443fc3578 608 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 90 484 1.7E-58 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain VEA_001221 c7265c35b9e5009dbcb05f43dda63bcf 367 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 212 246 - T 13-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 VEA_001221 c7265c35b9e5009dbcb05f43dda63bcf 367 Gene3D G3DSA:3.30.70.100 249 346 1.1E-13 T 13-10-2018 VEA_001221 c7265c35b9e5009dbcb05f43dda63bcf 367 SUPERFAMILY SSF82861 97 179 2.22E-14 T 13-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 VEA_001221 c7265c35b9e5009dbcb05f43dda63bcf 367 Pfam PF00924 Mechanosensitive ion channel 138 341 4.8E-55 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VEA_001221 c7265c35b9e5009dbcb05f43dda63bcf 367 SUPERFAMILY SSF82689 252 351 2.48E-17 T 13-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 VEA_001221 c7265c35b9e5009dbcb05f43dda63bcf 367 SUPERFAMILY SSF50182 180 247 3.27E-18 T 13-10-2018 IPR010920 LSM domain superfamily VEA_001221 c7265c35b9e5009dbcb05f43dda63bcf 367 Gene3D G3DSA:2.30.30.60 196 246 3.7E-10 T 13-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily VEA_000730 9863429b3883526d1c0fecf7dd2229fe 299 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 141 1.7E-14 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VEA_000730 9863429b3883526d1c0fecf7dd2229fe 299 SUPERFAMILY SSF64518 1 299 2.22E-53 T 13-10-2018 VEA_000730 9863429b3883526d1c0fecf7dd2229fe 299 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 182 3.9E-54 T 13-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 VEA_003903 047bcbf8df707d9da13f68198ae0d729 149 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 15 142 3.0E-66 T 13-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 VEA_003903 047bcbf8df707d9da13f68198ae0d729 149 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 2 145 31.86 T 13-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 VEA_003903 047bcbf8df707d9da13f68198ae0d729 149 Pfam PF06610 L-alanine exporter 8 142 2.8E-69 T 13-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 VEA_004035 5854b65bb8b1e12e0c7aad106f3c864e 206 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 92 188 4.0E-46 T 13-10-2018 VEA_004035 5854b65bb8b1e12e0c7aad106f3c864e 206 SMART SM00471 38 163 3.0E-8 T 13-10-2018 IPR003607 HD/PDEase domain VEA_004035 5854b65bb8b1e12e0c7aad106f3c864e 206 SUPERFAMILY SSF109604 16 196 4.85E-45 T 13-10-2018 VEA_004035 5854b65bb8b1e12e0c7aad106f3c864e 206 Gene3D G3DSA:1.10.3210.10 11 206 1.2E-85 T 13-10-2018 VEA_004035 5854b65bb8b1e12e0c7aad106f3c864e 206 Pfam PF13023 HD domain 23 170 2.9E-17 T 13-10-2018 IPR006674 HD domain VEA_004035 5854b65bb8b1e12e0c7aad106f3c864e 206 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 15 206 45.665 T 13-10-2018 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 VEA_001916 92d8f3028c523c28973d92b05cd47fb7 219 SUPERFAMILY SSF52540 16 202 8.5E-34 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001916 92d8f3028c523c28973d92b05cd47fb7 219 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 11 194 1.7E-74 T 13-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 VEA_001916 92d8f3028c523c28973d92b05cd47fb7 219 Gene3D G3DSA:3.40.50.300 3 201 2.4E-58 T 13-10-2018 VEA_001916 92d8f3028c523c28973d92b05cd47fb7 219 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 15 198 27.588 T 13-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 VEA_001916 92d8f3028c523c28973d92b05cd47fb7 219 Pfam PF01926 50S ribosome-binding GTPase 29 147 1.1E-20 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 VEA_002354 1c8b396745a513e41a7ef4054336430b 417 Pfam PF00999 Sodium/hydrogen exchanger family 30 390 1.5E-55 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VEA_004077 3a1d442729a8a3b3f9552a26b221663c 241 TIGRFAM TIGR01831 fabG_rel: putative 3-oxoacyl-(acyl-carrier-protein) reductase 5 241 1.7E-125 T 13-10-2018 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VEA_004077 3a1d442729a8a3b3f9552a26b221663c 241 Gene3D G3DSA:3.40.50.720 3 241 2.8E-74 T 13-10-2018 VEA_004077 3a1d442729a8a3b3f9552a26b221663c 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.6E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_004077 3a1d442729a8a3b3f9552a26b221663c 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.6E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_004077 3a1d442729a8a3b3f9552a26b221663c 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.6E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_004077 3a1d442729a8a3b3f9552a26b221663c 241 SUPERFAMILY SSF51735 3 240 1.36E-74 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_004077 3a1d442729a8a3b3f9552a26b221663c 241 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 194 9.8E-4 T 13-10-2018 VEA_004077 3a1d442729a8a3b3f9552a26b221663c 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 8.2E-43 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_004077 3a1d442729a8a3b3f9552a26b221663c 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 8.2E-43 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_004077 3a1d442729a8a3b3f9552a26b221663c 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 8.2E-43 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_004077 3a1d442729a8a3b3f9552a26b221663c 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 8.2E-43 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_004077 3a1d442729a8a3b3f9552a26b221663c 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 8.2E-43 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_004077 3a1d442729a8a3b3f9552a26b221663c 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 8.2E-43 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_004077 3a1d442729a8a3b3f9552a26b221663c 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 240 2.8E-58 T 13-10-2018 VEA_003142 cbdf259a0a66b1d299994d73f3a838be 213 Pfam PF13505 Outer membrane protein beta-barrel domain 10 176 1.9E-13 T 13-10-2018 IPR027385 Outer membrane protein beta-barrel VEA_003142 cbdf259a0a66b1d299994d73f3a838be 213 SUPERFAMILY SSF56925 33 176 4.97E-18 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VEA_003142 cbdf259a0a66b1d299994d73f3a838be 213 Gene3D G3DSA:2.40.160.20 27 189 3.3E-13 T 13-10-2018 VEA_003815 7dc8666b3f4afdd9931a1988e3b0cb2e 336 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 91 106 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VEA_003815 7dc8666b3f4afdd9931a1988e3b0cb2e 336 Gene3D G3DSA:1.10.10.60 264 333 2.6E-8 T 13-10-2018 VEA_003815 7dc8666b3f4afdd9931a1988e3b0cb2e 336 Pfam PF00158 Sigma-54 interaction domain 5 167 2.0E-57 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VEA_003815 7dc8666b3f4afdd9931a1988e3b0cb2e 336 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 313 333 2.0E-8 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEA_003815 7dc8666b3f4afdd9931a1988e3b0cb2e 336 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 296 313 2.0E-8 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEA_003815 7dc8666b3f4afdd9931a1988e3b0cb2e 336 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 5 330 2.7E-165 T 13-10-2018 IPR014317 Transcription activator PspF VEA_003815 7dc8666b3f4afdd9931a1988e3b0cb2e 336 SUPERFAMILY SSF46689 219 332 3.49E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_003815 7dc8666b3f4afdd9931a1988e3b0cb2e 336 Pfam PF02954 Bacterial regulatory protein, Fis family 296 330 1.9E-6 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEA_003815 7dc8666b3f4afdd9931a1988e3b0cb2e 336 PRINTS PR00819 CbxX/CfqX superfamily signature 88 107 6.0E-5 T 13-10-2018 IPR000641 CbxX/CfqX GO:0005524 VEA_003815 7dc8666b3f4afdd9931a1988e3b0cb2e 336 PRINTS PR00819 CbxX/CfqX superfamily signature 1 7 6.0E-5 T 13-10-2018 IPR000641 CbxX/CfqX GO:0005524 VEA_003815 7dc8666b3f4afdd9931a1988e3b0cb2e 336 PRINTS PR00819 CbxX/CfqX superfamily signature 222 234 6.0E-5 T 13-10-2018 IPR000641 CbxX/CfqX GO:0005524 VEA_003815 7dc8666b3f4afdd9931a1988e3b0cb2e 336 Gene3D G3DSA:3.40.50.300 1 176 1.4E-57 T 13-10-2018 VEA_003815 7dc8666b3f4afdd9931a1988e3b0cb2e 336 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 219 228 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VEA_003815 7dc8666b3f4afdd9931a1988e3b0cb2e 336 Gene3D G3DSA:1.10.8.60 177 259 2.5E-25 T 13-10-2018 VEA_003815 7dc8666b3f4afdd9931a1988e3b0cb2e 336 SUPERFAMILY SSF52540 4 237 8.96E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003815 7dc8666b3f4afdd9931a1988e3b0cb2e 336 SMART SM00382 25 177 1.7E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_001638 0e5a0cb229d9f78bbfe522ef997e85e2 352 Gene3D G3DSA:3.30.1180.20 182 352 1.4E-55 T 13-10-2018 VEA_001638 0e5a0cb229d9f78bbfe522ef997e85e2 352 SUPERFAMILY SSF82549 10 352 3.4E-124 T 13-10-2018 VEA_001638 0e5a0cb229d9f78bbfe522ef997e85e2 352 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 1 349 4.3E-142 T 13-10-2018 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 KEGG: 00561+2.7.1.121 VEA_001638 0e5a0cb229d9f78bbfe522ef997e85e2 352 Gene3D G3DSA:3.40.50.10440 11 181 1.1E-61 T 13-10-2018 VEA_001638 0e5a0cb229d9f78bbfe522ef997e85e2 352 Pfam PF02733 Dak1 domain 17 348 2.6E-124 T 13-10-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 VEA_003384 c162b1385d9f691e2f0598a2f90864e4 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 61 320 5.6E-27 T 13-10-2018 IPR005064 Bordetella uptake gene GO:0030288 VEA_003384 c162b1385d9f691e2f0598a2f90864e4 323 SUPERFAMILY SSF53850 104 289 6.15E-9 T 13-10-2018 VEA_003384 c162b1385d9f691e2f0598a2f90864e4 323 PIRSF PIRSF017082 2 323 7.2E-84 T 13-10-2018 IPR005064 Bordetella uptake gene GO:0030288 VEA_003384 c162b1385d9f691e2f0598a2f90864e4 323 Gene3D G3DSA:3.40.190.150 31 314 3.9E-59 T 13-10-2018 VEA_003384 c162b1385d9f691e2f0598a2f90864e4 323 Gene3D G3DSA:3.40.190.10 123 249 3.9E-59 T 13-10-2018 VEA_003968 89521253698d0de7162d4ca33dd76281 906 Pfam PF17291 N-terminal domain of M60-like peptidases 446 538 1.9E-5 T 13-10-2018 IPR035423 M60-like domain, N-terminal VEA_003968 89521253698d0de7162d4ca33dd76281 906 SMART SM01276 453 776 5.6E-46 T 13-10-2018 IPR031161 Peptidase family M60 domain VEA_004239 576bc5bcdc85a04330e9eb64782f6a7b 225 Gene3D G3DSA:1.10.3720.10 12 225 2.9E-51 T 13-10-2018 IPR035906 MetI-like superfamily VEA_004239 576bc5bcdc85a04330e9eb64782f6a7b 225 SUPERFAMILY SSF161098 15 210 6.02E-47 T 13-10-2018 IPR035906 MetI-like superfamily VEA_004239 576bc5bcdc85a04330e9eb64782f6a7b 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 223 2.6E-23 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_000216 d9872e91be75c08a6874a751194eb660 272 Gene3D G3DSA:3.40.190.10 32 249 2.5E-61 T 13-10-2018 VEA_000216 d9872e91be75c08a6874a751194eb660 272 SMART SM00062 39 262 3.8E-45 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEA_000216 d9872e91be75c08a6874a751194eb660 272 SUPERFAMILY SSF53850 7 259 7.61E-58 T 13-10-2018 VEA_000216 d9872e91be75c08a6874a751194eb660 272 Gene3D G3DSA:3.40.190.10 125 216 2.5E-61 T 13-10-2018 VEA_000216 d9872e91be75c08a6874a751194eb660 272 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 260 4.3E-51 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEA_000216 d9872e91be75c08a6874a751194eb660 272 SMART SM00079 39 261 0.0043 T 13-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 VEA_001111 ad24b4980f6d5817c9e1f75472410549 155 Pfam PF07670 Nucleoside recognition 31 124 8.0E-7 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VEA_001611 ca1d302d0777bd4d0fd9bf1375583e0c 576 Gene3D G3DSA:3.60.20.40 388 575 6.6E-47 T 13-10-2018 VEA_001611 ca1d302d0777bd4d0fd9bf1375583e0c 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 249 265 5.5E-59 T 13-10-2018 VEA_001611 ca1d302d0777bd4d0fd9bf1375583e0c 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 469 486 5.5E-59 T 13-10-2018 VEA_001611 ca1d302d0777bd4d0fd9bf1375583e0c 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 129 147 5.5E-59 T 13-10-2018 VEA_001611 ca1d302d0777bd4d0fd9bf1375583e0c 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 444 459 5.5E-59 T 13-10-2018 VEA_001611 ca1d302d0777bd4d0fd9bf1375583e0c 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 147 166 5.5E-59 T 13-10-2018 VEA_001611 ca1d302d0777bd4d0fd9bf1375583e0c 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 408 426 5.5E-59 T 13-10-2018 VEA_001611 ca1d302d0777bd4d0fd9bf1375583e0c 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 56 81 5.5E-59 T 13-10-2018 VEA_001611 ca1d302d0777bd4d0fd9bf1375583e0c 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 386 404 5.5E-59 T 13-10-2018 VEA_001611 ca1d302d0777bd4d0fd9bf1375583e0c 576 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 279 298 5.5E-59 T 13-10-2018 VEA_001611 ca1d302d0777bd4d0fd9bf1375583e0c 576 SUPERFAMILY SSF56235 30 570 2.32E-146 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VEA_001611 ca1d302d0777bd4d0fd9bf1375583e0c 576 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 35 568 8.6E-118 T 13-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 VEA_001611 ca1d302d0777bd4d0fd9bf1375583e0c 576 Gene3D G3DSA:1.10.246.130 266 387 2.2E-32 T 13-10-2018 VEA_001611 ca1d302d0777bd4d0fd9bf1375583e0c 576 Pfam PF01019 Gamma-glutamyltranspeptidase 49 570 2.4E-141 T 13-10-2018 VEA_001880 aebb007a935b7d738c195c93c637453e 189 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VEA_001880 aebb007a935b7d738c195c93c637453e 189 SUPERFAMILY SSF55811 4 181 3.52E-41 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VEA_001880 aebb007a935b7d738c195c93c637453e 189 Pfam PF00293 NUDIX domain 46 157 8.7E-16 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VEA_001880 aebb007a935b7d738c195c93c637453e 189 Gene3D G3DSA:3.90.79.10 7 189 8.8E-50 T 13-10-2018 VEA_001965 c0332a7cbd3888d0c56b753835ba8ffb 450 Gene3D G3DSA:1.10.510.10 154 319 3.3E-27 T 13-10-2018 VEA_001965 c0332a7cbd3888d0c56b753835ba8ffb 450 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 85 110 - T 13-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 VEA_001965 c0332a7cbd3888d0c56b753835ba8ffb 450 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 198 210 - T 13-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 VEA_001965 c0332a7cbd3888d0c56b753835ba8ffb 450 SUPERFAMILY SSF56112 74 278 4.32E-51 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily VEA_001965 c0332a7cbd3888d0c56b753835ba8ffb 450 Gene3D G3DSA:3.30.200.20 70 153 4.0E-20 T 13-10-2018 VEA_001965 c0332a7cbd3888d0c56b753835ba8ffb 450 Pfam PF00069 Protein kinase domain 79 280 2.5E-38 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VEA_001965 c0332a7cbd3888d0c56b753835ba8ffb 450 SMART SM00220 79 325 1.8E-26 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VEA_002144 3ca5089562fff7a8b9ad409090de0419 136 Pfam PF03748 Flagellar basal body-associated protein FliL 34 136 7.3E-19 T 13-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 VEA_000538 13a71161c252d27d6ff00142aba7a17d 106 Pfam PF01541 GIY-YIG catalytic domain 9 79 6.6E-17 T 13-10-2018 IPR000305 GIY-YIG endonuclease VEA_000538 13a71161c252d27d6ff00142aba7a17d 106 Gene3D G3DSA:3.40.1440.10 3 104 2.0E-28 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 VEA_000538 13a71161c252d27d6ff00142aba7a17d 106 SMART SM00465 8 86 7.3E-6 T 13-10-2018 IPR000305 GIY-YIG endonuclease VEA_000538 13a71161c252d27d6ff00142aba7a17d 106 SUPERFAMILY SSF82771 8 79 8.24E-14 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 VEA_002610 4cdd2747f3a8e26752e275995622d8fa 131 Pfam PF02033 Ribosome-binding factor A 7 110 1.3E-30 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 VEA_002610 4cdd2747f3a8e26752e275995622d8fa 131 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 116 6.1E-35 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 VEA_002610 4cdd2747f3a8e26752e275995622d8fa 131 SUPERFAMILY SSF89919 2 105 3.4E-32 T 13-10-2018 IPR023799 Ribosome-binding factor A domain superfamily VEA_002610 4cdd2747f3a8e26752e275995622d8fa 131 Gene3D G3DSA:3.30.300.20 1 106 1.3E-35 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta VEA_002610 4cdd2747f3a8e26752e275995622d8fa 131 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 111 26.709 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 VEA_002610 4cdd2747f3a8e26752e275995622d8fa 131 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 98 2.0E-46 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 VEA_002610 4cdd2747f3a8e26752e275995622d8fa 131 ProSitePatterns PS01319 Ribosome-binding factor A signature. 77 98 - T 13-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 VEA_004370 76c27afa22b15d60cfba7950c0935f28 149 SUPERFAMILY SSF54631 1 132 8.46E-32 T 13-10-2018 VEA_004370 76c27afa22b15d60cfba7950c0935f28 149 Pfam PF00571 CBS domain 4 58 1.0E-12 T 13-10-2018 IPR000644 CBS domain VEA_004370 76c27afa22b15d60cfba7950c0935f28 149 Pfam PF00571 CBS domain 79 127 2.5E-8 T 13-10-2018 IPR000644 CBS domain VEA_004370 76c27afa22b15d60cfba7950c0935f28 149 Gene3D G3DSA:3.10.580.10 1 149 3.5E-50 T 13-10-2018 VEA_004370 76c27afa22b15d60cfba7950c0935f28 149 SMART SM00116 11 59 2.2E-9 T 13-10-2018 IPR000644 CBS domain VEA_004370 76c27afa22b15d60cfba7950c0935f28 149 SMART SM00116 84 131 1.2E-4 T 13-10-2018 IPR000644 CBS domain VEA_001383 705ec8bcaf3c98c487c2a02858260c0c 719 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 510 534 1.7E-62 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VEA_001383 705ec8bcaf3c98c487c2a02858260c0c 719 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 643 665 1.7E-62 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VEA_001383 705ec8bcaf3c98c487c2a02858260c0c 719 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 624 639 1.7E-62 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VEA_001383 705ec8bcaf3c98c487c2a02858260c0c 719 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 568 588 1.7E-62 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VEA_001383 705ec8bcaf3c98c487c2a02858260c0c 719 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 538 557 1.7E-62 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VEA_001383 705ec8bcaf3c98c487c2a02858260c0c 719 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 484 502 1.7E-62 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VEA_001383 705ec8bcaf3c98c487c2a02858260c0c 719 SUPERFAMILY SSF50993 37 448 1.88E-102 T 13-10-2018 VEA_001383 705ec8bcaf3c98c487c2a02858260c0c 719 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 545 575 - T 13-10-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 VEA_001383 705ec8bcaf3c98c487c2a02858260c0c 719 SUPERFAMILY SSF53474 453 697 1.88E-49 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_001383 705ec8bcaf3c98c487c2a02858260c0c 719 Pfam PF00326 Prolyl oligopeptidase family 499 714 4.3E-70 T 13-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 VEA_001383 705ec8bcaf3c98c487c2a02858260c0c 719 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 42 440 1.1E-129 T 13-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 VEA_001383 705ec8bcaf3c98c487c2a02858260c0c 719 Gene3D G3DSA:2.130.10.120 108 444 5.6E-257 T 13-10-2018 VEA_001383 705ec8bcaf3c98c487c2a02858260c0c 719 Gene3D G3DSA:3.40.50.1820 50 683 5.6E-257 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_004194 0fe19e0920d970461d4e5ac4196648c1 46 Pfam PF11346 Protein of unknown function (DUF3149) 4 43 1.5E-16 T 13-10-2018 IPR021494 Protein of unknown function DUF3149 VEA_003932 7c25c76ccb61071efe0d09d8398952d5 322 Pfam PF14397 Sugar-transfer associated ATP-grasp 22 294 1.9E-114 T 13-10-2018 IPR039523 Alpha-L-glutamate ligase-related protein, ATP-grasp domain KEGG: 00270+6.3.2.2+6.3.2.3|KEGG: 00480+6.3.2.2+6.3.2.3|MetaCyc: PWY-6840|MetaCyc: PWY-7255 VEA_003932 7c25c76ccb61071efe0d09d8398952d5 322 SUPERFAMILY SSF56059 43 280 1.37E-19 T 13-10-2018 VEA_003932 7c25c76ccb61071efe0d09d8398952d5 322 TIGRFAM TIGR02291 rimK_rel_E_lig: alpha-L-glutamate ligase homolog 5 320 2.1E-176 T 13-10-2018 IPR011758 Alpha-L-glutamate ligase-related protein VEA_001074 681d7440429cc5543b1f03517a9a6305 916 Gene3D G3DSA:3.30.830.10 259 467 1.9E-10 T 13-10-2018 VEA_001074 681d7440429cc5543b1f03517a9a6305 916 Gene3D G3DSA:3.30.830.10 506 716 1.7E-13 T 13-10-2018 VEA_001074 681d7440429cc5543b1f03517a9a6305 916 Gene3D G3DSA:3.30.830.10 731 914 8.7E-13 T 13-10-2018 VEA_001074 681d7440429cc5543b1f03517a9a6305 916 SUPERFAMILY SSF63411 25 239 7.51E-46 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VEA_001074 681d7440429cc5543b1f03517a9a6305 916 Pfam PF05193 Peptidase M16 inactive domain 201 374 1.5E-13 T 13-10-2018 IPR007863 Peptidase M16, C-terminal VEA_001074 681d7440429cc5543b1f03517a9a6305 916 Pfam PF05193 Peptidase M16 inactive domain 669 847 3.3E-8 T 13-10-2018 IPR007863 Peptidase M16, C-terminal VEA_001074 681d7440429cc5543b1f03517a9a6305 916 SUPERFAMILY SSF63411 493 714 1.07E-24 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VEA_001074 681d7440429cc5543b1f03517a9a6305 916 SUPERFAMILY SSF63411 745 911 5.41E-14 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VEA_001074 681d7440429cc5543b1f03517a9a6305 916 Pfam PF00675 Insulinase (Peptidase family M16) 47 166 9.8E-26 T 13-10-2018 IPR011765 Peptidase M16, N-terminal VEA_001074 681d7440429cc5543b1f03517a9a6305 916 Gene3D G3DSA:3.30.830.10 6 247 1.2E-62 T 13-10-2018 VEA_001074 681d7440429cc5543b1f03517a9a6305 916 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 60 83 - T 13-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 VEA_001600 3c6cf7bf296ec6ff64ed69b086c15570 418 Pfam PF03222 Tryptophan/tyrosine permease family 30 406 2.3E-17 T 13-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 VEA_001800 a4792c7270bd28543f372d81d1240beb 357 SUPERFAMILY SSF51269 295 356 8.95E-17 T 13-10-2018 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Reactome: R-HSA-4085001 VEA_001800 a4792c7270bd28543f372d81d1240beb 357 Gene3D G3DSA:3.90.1210.10 292 357 3.8E-18 T 13-10-2018 VEA_001800 a4792c7270bd28543f372d81d1240beb 357 SUPERFAMILY SSF51569 2 312 2.69E-78 T 13-10-2018 VEA_001800 a4792c7270bd28543f372d81d1240beb 357 Pfam PF03102 NeuB family 22 289 1.3E-99 T 13-10-2018 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 VEA_001800 a4792c7270bd28543f372d81d1240beb 357 Gene3D G3DSA:3.20.20.70 1 286 8.1E-94 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_001800 a4792c7270bd28543f372d81d1240beb 357 TIGRFAM TIGR03569 NeuB_NnaB: N-acetylneuraminate synthase 2 355 6.8E-150 T 13-10-2018 IPR020007 N-acetylneuraminate synthase KEGG: 00520+2.5.1.101|MetaCyc: PWY-6749|MetaCyc: PWY-7131 VEA_000164 e3af492354c41cc261265364f266059a 311 SUPERFAMILY SSF50891 185 294 3.57E-9 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily VEA_000164 e3af492354c41cc261265364f266059a 311 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 28 291 4.9E-85 T 13-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B VEA_000164 e3af492354c41cc261265364f266059a 311 SMART SM00797 27 308 8.1E-136 T 13-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B VEA_000164 e3af492354c41cc261265364f266059a 311 Gene3D G3DSA:2.40.100.10 182 309 1.4E-42 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily VEA_000164 e3af492354c41cc261265364f266059a 311 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 10 292 9.9E-78 T 13-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B VEA_004152 2dac3845f9f922ee36b27c983e769c8a 469 Gene3D G3DSA:2.40.160.10 68 467 2.3E-10 T 13-10-2018 IPR023614 Porin domain superfamily VEA_004257 c4ce2c677d4e434555141727f7d413b1 294 Pfam PF00348 Polyprenyl synthetase 29 270 1.7E-57 T 13-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 VEA_004257 c4ce2c677d4e434555141727f7d413b1 294 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 79 95 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site VEA_004257 c4ce2c677d4e434555141727f7d413b1 294 Gene3D G3DSA:1.10.600.10 1 294 5.0E-113 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily VEA_004257 c4ce2c677d4e434555141727f7d413b1 294 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site VEA_004257 c4ce2c677d4e434555141727f7d413b1 294 SUPERFAMILY SSF48576 3 285 2.4E-86 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily VEA_001117 7027343b70281f9f5fc2a5daed9bb992 721 Pfam PF13614 AAA domain 539 651 1.9E-11 T 13-10-2018 IPR025669 AAA domain VEA_001117 7027343b70281f9f5fc2a5daed9bb992 721 Gene3D G3DSA:3.40.50.300 442 721 1.8E-77 T 13-10-2018 VEA_001117 7027343b70281f9f5fc2a5daed9bb992 721 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 509 713 3.9E-52 T 13-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 VEA_001117 7027343b70281f9f5fc2a5daed9bb992 721 Pfam PF02706 Chain length determinant protein 14 106 1.2E-19 T 13-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 VEA_001117 7027343b70281f9f5fc2a5daed9bb992 721 SUPERFAMILY SSF52540 527 706 1.83E-35 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001117 7027343b70281f9f5fc2a5daed9bb992 721 Pfam PF13807 G-rich domain on putative tyrosine kinase 369 450 7.7E-35 T 13-10-2018 IPR032807 Tyrosine kinase, G-rich domain VEA_003868 6941e77987044bb7958cf3e4989ad529 228 PIRSF PIRSF006755 1 226 2.6E-77 T 13-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 VEA_003868 6941e77987044bb7958cf3e4989ad529 228 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 212 29.692 T 13-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 VEA_003868 6941e77987044bb7958cf3e4989ad529 228 Pfam PF13500 AAA domain 4 211 9.2E-39 T 13-10-2018 VEA_003868 6941e77987044bb7958cf3e4989ad529 228 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 4.0E-54 T 13-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 VEA_003868 6941e77987044bb7958cf3e4989ad529 228 Gene3D G3DSA:3.40.50.300 3 224 1.7E-70 T 13-10-2018 VEA_003868 6941e77987044bb7958cf3e4989ad529 228 SUPERFAMILY SSF52540 1 215 3.84E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003729 c79b1bd27b1bb500f4e5cdb564af13d6 222 Pfam PF13488 Glycine zipper 38 86 1.5E-10 T 13-10-2018 IPR039567 Glycine zipper domain VEA_003729 c79b1bd27b1bb500f4e5cdb564af13d6 222 Pfam PF00691 OmpA family 118 212 4.4E-23 T 13-10-2018 IPR006665 OmpA-like domain VEA_003729 c79b1bd27b1bb500f4e5cdb564af13d6 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 181 200 4.2E-7 T 13-10-2018 VEA_003729 c79b1bd27b1bb500f4e5cdb564af13d6 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 201 221 4.2E-7 T 13-10-2018 VEA_003729 c79b1bd27b1bb500f4e5cdb564af13d6 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 163 180 4.2E-7 T 13-10-2018 VEA_003729 c79b1bd27b1bb500f4e5cdb564af13d6 222 Gene3D G3DSA:3.30.1330.60 80 222 2.3E-44 T 13-10-2018 IPR036737 OmpA-like domain superfamily VEA_003729 c79b1bd27b1bb500f4e5cdb564af13d6 222 SUPERFAMILY SSF103088 106 221 3.01E-37 T 13-10-2018 IPR036737 OmpA-like domain superfamily VEA_003729 c79b1bd27b1bb500f4e5cdb564af13d6 222 PRINTS PR01021 OMPA domain signature 118 140 5.0E-12 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEA_003729 c79b1bd27b1bb500f4e5cdb564af13d6 222 PRINTS PR01021 OMPA domain signature 148 163 5.0E-12 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEA_003729 c79b1bd27b1bb500f4e5cdb564af13d6 222 PRINTS PR01021 OMPA domain signature 163 179 5.0E-12 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEA_002430 179d62243fe192352dfd6327f9356321 356 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 354 2.6E-134 T 13-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 VEA_002430 179d62243fe192352dfd6327f9356321 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 8 354 3.8E-69 T 13-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 VEA_004085 8f5fad70fc8179828ee334faf45281eb 93 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 73 1.0E-35 T 13-10-2018 IPR027354 YcgL domain VEA_004085 8f5fad70fc8179828ee334faf45281eb 93 Gene3D G3DSA:3.10.510.20 1 73 3.6E-30 T 13-10-2018 IPR038068 YcgL-like superfamily VEA_004085 8f5fad70fc8179828ee334faf45281eb 93 SUPERFAMILY SSF160191 1 91 1.57E-37 T 13-10-2018 IPR038068 YcgL-like superfamily VEA_004085 8f5fad70fc8179828ee334faf45281eb 93 Hamap MF_01866 Protein YcgL [ycgL]. 1 87 27.365 T 13-10-2018 IPR027354 YcgL domain VEA_004085 8f5fad70fc8179828ee334faf45281eb 93 Pfam PF05166 YcgL domain 3 74 3.9E-32 T 13-10-2018 IPR027354 YcgL domain VEA_004420 85f3199bfe63d7e1d9a8b8334967bfbd 294 Gene3D G3DSA:2.40.30.30 171 294 2.2E-40 T 13-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 VEA_004420 85f3199bfe63d7e1d9a8b8334967bfbd 294 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 1 39 1.4E-8 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VEA_004420 85f3199bfe63d7e1d9a8b8334967bfbd 294 PIRSF PIRSF004491 1 294 3.3E-107 T 13-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 VEA_004420 85f3199bfe63d7e1d9a8b8334967bfbd 294 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 1 290 4.8E-109 T 13-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 VEA_004420 85f3199bfe63d7e1d9a8b8334967bfbd 294 Gene3D G3DSA:3.40.50.620 1 170 1.8E-60 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_004420 85f3199bfe63d7e1d9a8b8334967bfbd 294 SMART SM00904 166 290 4.2E-64 T 13-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 VEA_004420 85f3199bfe63d7e1d9a8b8334967bfbd 294 Pfam PF01687 Riboflavin kinase 167 289 4.3E-39 T 13-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 VEA_004420 85f3199bfe63d7e1d9a8b8334967bfbd 294 SUPERFAMILY SSF52374 1 158 2.04E-35 T 13-10-2018 VEA_004420 85f3199bfe63d7e1d9a8b8334967bfbd 294 SUPERFAMILY SSF82114 157 292 2.03E-45 T 13-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 VEA_004420 85f3199bfe63d7e1d9a8b8334967bfbd 294 Pfam PF06574 FAD synthetase 1 150 2.1E-57 T 13-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 VEA_000999 d5a92185b0d254a8753a60e7d4399f2c 351 SUPERFAMILY SSF56935 25 349 1.37E-40 T 13-10-2018 VEA_000999 d5a92185b0d254a8753a60e7d4399f2c 351 Gene3D G3DSA:2.40.160.10 21 350 9.3E-34 T 13-10-2018 IPR023614 Porin domain superfamily VEA_001476 caff1ad0926d6da2f2d157ac5e6d2130 298 Pfam PF01545 Cation efflux family 13 214 3.3E-31 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VEA_001476 caff1ad0926d6da2f2d157ac5e6d2130 298 Gene3D G3DSA:1.20.1510.10 9 214 1.8E-19 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VEA_001476 caff1ad0926d6da2f2d157ac5e6d2130 298 SUPERFAMILY SSF161111 7 214 6.54E-32 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VEA_001476 caff1ad0926d6da2f2d157ac5e6d2130 298 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 10 280 3.9E-25 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VEA_001379 5cf87ef5e68ef030460bae70a1bbf515 652 Gene3D G3DSA:3.40.50.720 419 578 1.4E-35 T 13-10-2018 VEA_001379 5cf87ef5e68ef030460bae70a1bbf515 652 SUPERFAMILY SSF51735 419 560 1.07E-32 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_001379 5cf87ef5e68ef030460bae70a1bbf515 652 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 12 303 1.0E-72 T 13-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 VEA_001379 5cf87ef5e68ef030460bae70a1bbf515 652 Pfam PF00999 Sodium/hydrogen exchanger family 10 390 1.7E-58 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VEA_001379 5cf87ef5e68ef030460bae70a1bbf515 652 Pfam PF02254 TrkA-N domain 422 534 5.5E-25 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VEA_001379 5cf87ef5e68ef030460bae70a1bbf515 652 Gene3D G3DSA:1.20.1530.20 2 399 9.5E-77 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily VEA_001217 af40adf270b36b2221007b00590db128 252 SUPERFAMILY SSF49354 21 152 1.1E-25 T 13-10-2018 IPR008962 PapD-like superfamily VEA_001217 af40adf270b36b2221007b00590db128 252 Gene3D G3DSA:2.60.40.10 32 154 7.5E-11 T 13-10-2018 IPR013783 Immunoglobulin-like fold VEA_001217 af40adf270b36b2221007b00590db128 252 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 37 150 8.6E-20 T 13-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 VEA_001355 e49b2084c0e6345dc67cbeb1bb8cd43b 218 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 139 216 3.6E-22 T 13-10-2018 IPR037682 TonB, C-terminal GO:0055085 VEA_001355 e49b2084c0e6345dc67cbeb1bb8cd43b 218 Gene3D G3DSA:3.30.1150.10 109 217 7.9E-22 T 13-10-2018 VEA_001355 e49b2084c0e6345dc67cbeb1bb8cd43b 218 SUPERFAMILY SSF74653 138 214 6.54E-22 T 13-10-2018 VEA_001355 e49b2084c0e6345dc67cbeb1bb8cd43b 218 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 140 216 2.7E-22 T 13-10-2018 IPR006260 TonB/TolA, C-terminal VEA_000270 a424c0c902533f274926792e16cc1419 176 Gene3D G3DSA:3.40.630.30 1 164 1.1E-26 T 13-10-2018 VEA_000270 a424c0c902533f274926792e16cc1419 176 Pfam PF13302 Acetyltransferase (GNAT) domain 10 149 7.7E-11 T 13-10-2018 IPR000182 GNAT domain VEA_000270 a424c0c902533f274926792e16cc1419 176 SUPERFAMILY SSF55729 8 151 1.46E-24 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_004251 2f23b80a37ce24746355b0430f665918 207 Pfam PF01738 Dienelactone hydrolase family 79 202 8.9E-6 T 13-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 VEA_004251 2f23b80a37ce24746355b0430f665918 207 Gene3D G3DSA:3.40.50.1820 13 186 1.1E-29 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_004251 2f23b80a37ce24746355b0430f665918 207 SUPERFAMILY SSF53474 6 202 1.12E-27 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_000845 1e8273eeb7dc38dcbda84d6c6d77d42f 134 Gene3D G3DSA:3.30.420.270 61 129 2.9E-11 T 13-10-2018 VEA_000845 1e8273eeb7dc38dcbda84d6c6d77d42f 134 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 132 5.4E-28 T 13-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 VEA_000263 76d52962fb6bd9bddfb9883a0cc65fde 616 Pfam PF01757 Acyltransferase family 5 318 1.8E-29 T 13-10-2018 IPR002656 Acyltransferase 3 GO:0016747 VEA_002166 45be8f571067b7632f2a1f3b880e9ea2 394 Gene3D G3DSA:2.40.30.10 338 393 8.1E-30 T 13-10-2018 VEA_002166 45be8f571067b7632f2a1f3b880e9ea2 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 5.2E-14 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VEA_002166 45be8f571067b7632f2a1f3b880e9ea2 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 5.6E-231 T 13-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VEA_002166 45be8f571067b7632f2a1f3b880e9ea2 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site VEA_002166 45be8f571067b7632f2a1f3b880e9ea2 394 SUPERFAMILY SSF52540 6 219 1.37E-60 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002166 45be8f571067b7632f2a1f3b880e9ea2 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 2.1E-15 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VEA_002166 45be8f571067b7632f2a1f3b880e9ea2 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.574 T 13-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VEA_002166 45be8f571067b7632f2a1f3b880e9ea2 394 Gene3D G3DSA:2.40.30.10 206 334 1.9E-52 T 13-10-2018 VEA_002166 45be8f571067b7632f2a1f3b880e9ea2 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 9.3E-34 T 13-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal VEA_002166 45be8f571067b7632f2a1f3b880e9ea2 394 SUPERFAMILY SSF50465 298 393 1.96E-35 T 13-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VEA_002166 45be8f571067b7632f2a1f3b880e9ea2 394 SUPERFAMILY SSF50447 205 301 2.55E-29 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VEA_002166 45be8f571067b7632f2a1f3b880e9ea2 394 Gene3D G3DSA:3.40.50.300 1 203 1.4E-69 T 13-10-2018 VEA_002166 45be8f571067b7632f2a1f3b880e9ea2 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.7E-23 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_002166 45be8f571067b7632f2a1f3b880e9ea2 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.7E-23 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_002166 45be8f571067b7632f2a1f3b880e9ea2 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-23 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_002166 45be8f571067b7632f2a1f3b880e9ea2 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.7E-23 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_002166 45be8f571067b7632f2a1f3b880e9ea2 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.7E-23 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_002166 45be8f571067b7632f2a1f3b880e9ea2 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 5.5E-58 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_003922 69e826f71e3fb1e72ae86b4fc090c119 355 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 355 180.74 T 13-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 VEA_003922 69e826f71e3fb1e72ae86b4fc090c119 355 SUPERFAMILY SSF52540 46 277 1.72E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003922 69e826f71e3fb1e72ae86b4fc090c119 355 Gene3D G3DSA:1.10.10.10 283 355 4.8E-32 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_003922 69e826f71e3fb1e72ae86b4fc090c119 355 SUPERFAMILY SSF46785 283 353 2.31E-25 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_003922 69e826f71e3fb1e72ae86b4fc090c119 355 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 279 352 2.1E-33 T 13-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 VEA_003922 69e826f71e3fb1e72ae86b4fc090c119 355 Gene3D G3DSA:3.40.50.300 46 207 2.9E-40 T 13-10-2018 VEA_003922 69e826f71e3fb1e72ae86b4fc090c119 355 SMART SM00382 77 210 2.1E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_003922 69e826f71e3fb1e72ae86b4fc090c119 355 Gene3D G3DSA:1.10.8.60 208 281 9.3E-31 T 13-10-2018 VEA_003922 69e826f71e3fb1e72ae86b4fc090c119 355 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 49 352 1.4E-146 T 13-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 VEA_003922 69e826f71e3fb1e72ae86b4fc090c119 355 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 37 261 2.0E-116 T 13-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 VEA_003922 69e826f71e3fb1e72ae86b4fc090c119 355 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 276 353 1.0E-38 T 13-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 VEA_000489 affa61a3a9e3556c5f94d025186c7471 763 Pfam PF00563 EAL domain 508 742 2.0E-72 T 13-10-2018 IPR001633 EAL domain VEA_000489 affa61a3a9e3556c5f94d025186c7471 763 SMART SM00052 502 747 2.8E-109 T 13-10-2018 IPR001633 EAL domain VEA_000489 affa61a3a9e3556c5f94d025186c7471 763 SMART SM00267 326 492 6.6E-48 T 13-10-2018 IPR000160 GGDEF domain VEA_000489 affa61a3a9e3556c5f94d025186c7471 763 Pfam PF00990 Diguanylate cyclase, GGDEF domain 336 486 2.9E-42 T 13-10-2018 IPR000160 GGDEF domain VEA_000489 affa61a3a9e3556c5f94d025186c7471 763 Gene3D G3DSA:3.30.450.20 29 181 1.5E-8 T 13-10-2018 VEA_000489 affa61a3a9e3556c5f94d025186c7471 763 Pfam PF02743 Cache domain 36 225 3.6E-14 T 13-10-2018 IPR033479 Double Cache domain 1 VEA_000489 affa61a3a9e3556c5f94d025186c7471 763 Gene3D G3DSA:3.20.20.450 505 761 9.2E-90 T 13-10-2018 IPR035919 EAL domain superfamily VEA_000489 affa61a3a9e3556c5f94d025186c7471 763 SUPERFAMILY SSF141868 507 756 6.54E-84 T 13-10-2018 IPR035919 EAL domain superfamily VEA_000489 affa61a3a9e3556c5f94d025186c7471 763 Gene3D G3DSA:3.30.70.270 331 504 5.2E-52 T 13-10-2018 VEA_000489 affa61a3a9e3556c5f94d025186c7471 763 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 335 487 7.9E-35 T 13-10-2018 IPR000160 GGDEF domain VEA_000489 affa61a3a9e3556c5f94d025186c7471 763 SUPERFAMILY SSF55073 341 492 1.18E-42 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_002794 db01e9aa1a23fd5995a003549a69259b 339 PIRSF PIRSF026343 4 339 6.5E-118 T 13-10-2018 IPR014524 Outer membrane protein assembly factor BamC VEA_002794 db01e9aa1a23fd5995a003549a69259b 339 Gene3D G3DSA:3.30.310.170 221 339 5.6E-42 T 13-10-2018 VEA_002794 db01e9aa1a23fd5995a003549a69259b 339 Pfam PF06804 NlpB/DapX lipoprotein 35 336 3.5E-103 T 13-10-2018 IPR010653 NlpB/DapX lipoprotein VEA_002794 db01e9aa1a23fd5995a003549a69259b 339 Gene3D G3DSA:3.30.530.50 97 207 5.8E-12 T 13-10-2018 VEA_002794 db01e9aa1a23fd5995a003549a69259b 339 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 4 338 33.313 T 13-10-2018 IPR014524 Outer membrane protein assembly factor BamC VEA_002182 4d0ad644f5ff6ef2f0ef27fbfb9d9cb9 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 5.7E-19 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VEA_002182 4d0ad644f5ff6ef2f0ef27fbfb9d9cb9 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 5.7E-19 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VEA_002182 4d0ad644f5ff6ef2f0ef27fbfb9d9cb9 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 5.7E-19 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VEA_002182 4d0ad644f5ff6ef2f0ef27fbfb9d9cb9 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 13-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VEA_002182 4d0ad644f5ff6ef2f0ef27fbfb9d9cb9 90 SMART SM00411 1 90 1.4E-46 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VEA_002182 4d0ad644f5ff6ef2f0ef27fbfb9d9cb9 90 SUPERFAMILY SSF47729 1 90 3.97E-33 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VEA_002182 4d0ad644f5ff6ef2f0ef27fbfb9d9cb9 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.2E-33 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VEA_002182 4d0ad644f5ff6ef2f0ef27fbfb9d9cb9 90 Gene3D G3DSA:4.10.520.10 1 90 4.6E-37 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VEA_003474 06e28fc07c60011a23965d1d3a9f3627 225 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 8 212 2.9E-55 T 13-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain VEA_000366 992f40f37461c65d5bf8225d5d0fe034 194 ProSitePatterns PS01081 TetR-type HTH domain signature. 21 52 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VEA_000366 992f40f37461c65d5bf8225d5d0fe034 194 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 193 93.257 T 13-10-2018 IPR017757 Transcriptional repressor BetI VEA_000366 992f40f37461c65d5bf8225d5d0fe034 194 SUPERFAMILY SSF46689 3 72 2.15E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_000366 992f40f37461c65d5bf8225d5d0fe034 194 Gene3D G3DSA:1.10.357.10 1 191 7.9E-46 T 13-10-2018 VEA_000366 992f40f37461c65d5bf8225d5d0fe034 194 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 1 187 9.1E-74 T 13-10-2018 IPR017757 Transcriptional repressor BetI VEA_000366 992f40f37461c65d5bf8225d5d0fe034 194 SUPERFAMILY SSF48498 82 187 5.78E-16 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VEA_000366 992f40f37461c65d5bf8225d5d0fe034 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 54 1.4E-11 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEA_000366 992f40f37461c65d5bf8225d5d0fe034 194 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 80 187 8.7E-33 T 13-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal VEA_000097 06c22acc4232bcc0526864536cbf5d94 266 PIRSF PIRSF016184 1 265 3.4E-50 T 13-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 VEA_000097 06c22acc4232bcc0526864536cbf5d94 266 Pfam PF02567 Phenazine biosynthesis-like protein 8 261 2.2E-61 T 13-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 VEA_000097 06c22acc4232bcc0526864536cbf5d94 266 Gene3D G3DSA:3.10.310.10 116 253 7.4E-83 T 13-10-2018 VEA_000097 06c22acc4232bcc0526864536cbf5d94 266 SUPERFAMILY SSF54506 2 264 2.86E-69 T 13-10-2018 VEA_000097 06c22acc4232bcc0526864536cbf5d94 266 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 2 265 2.2E-39 T 13-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 VEA_000097 06c22acc4232bcc0526864536cbf5d94 266 Gene3D G3DSA:3.10.310.10 6 261 7.4E-83 T 13-10-2018 VEA_001045 f0c7fc95e9bad7860ca4c9414ccd0b72 152 Gene3D G3DSA:1.10.10.10 10 152 4.7E-37 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001045 f0c7fc95e9bad7860ca4c9414ccd0b72 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 79 1.8E-8 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEA_001045 f0c7fc95e9bad7860ca4c9414ccd0b72 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 99 115 1.8E-8 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEA_001045 f0c7fc95e9bad7860ca4c9414ccd0b72 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 80 95 1.8E-8 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEA_001045 f0c7fc95e9bad7860ca4c9414ccd0b72 152 Pfam PF01047 MarR family 46 103 5.2E-17 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEA_001045 f0c7fc95e9bad7860ca4c9414ccd0b72 152 SUPERFAMILY SSF46785 12 152 2.96E-36 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_001045 f0c7fc95e9bad7860ca4c9414ccd0b72 152 SMART SM00347 39 137 1.4E-24 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEA_001568 78db21d3507ca8bf3c594b47d6ae91c8 125 Gene3D G3DSA:3.10.450.50 1 125 4.6E-33 T 13-10-2018 VEA_001568 78db21d3507ca8bf3c594b47d6ae91c8 125 Pfam PF12680 SnoaL-like domain 12 107 4.6E-14 T 13-10-2018 IPR037401 SnoaL-like domain VEA_001568 78db21d3507ca8bf3c594b47d6ae91c8 125 SUPERFAMILY SSF54427 4 115 2.16E-25 T 13-10-2018 IPR032710 NTF2-like domain superfamily VEA_003057 5d5294fecffdebfa9b213b0a8d536c1c 286 Gene3D G3DSA:3.40.190.290 94 284 3.7E-39 T 13-10-2018 VEA_003057 5d5294fecffdebfa9b213b0a8d536c1c 286 SUPERFAMILY SSF53850 89 286 1.45E-31 T 13-10-2018 VEA_003057 5d5294fecffdebfa9b213b0a8d536c1c 286 Pfam PF03466 LysR substrate binding domain 89 285 2.8E-28 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_003057 5d5294fecffdebfa9b213b0a8d536c1c 286 SUPERFAMILY SSF46785 4 89 1.6E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_003057 5d5294fecffdebfa9b213b0a8d536c1c 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 3.4E-15 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_003057 5d5294fecffdebfa9b213b0a8d536c1c 286 Gene3D G3DSA:1.10.10.10 3 93 6.9E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_003822 368067f8340a5abdb7dd38ee9eb96fa9 301 SUPERFAMILY SSF64182 1 298 8.24E-66 T 13-10-2018 IPR038763 DHH phosphoesterase superfamily VEA_003822 368067f8340a5abdb7dd38ee9eb96fa9 301 Gene3D G3DSA:3.10.310.20 187 301 1.6E-22 T 13-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VEA_003822 368067f8340a5abdb7dd38ee9eb96fa9 301 SMART SM01131 178 300 1.2E-33 T 13-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VEA_003822 368067f8340a5abdb7dd38ee9eb96fa9 301 Gene3D G3DSA:3.90.1640.10 1 186 1.0E-62 T 13-10-2018 VEA_003822 368067f8340a5abdb7dd38ee9eb96fa9 301 Pfam PF01368 DHH family 2 142 8.5E-22 T 13-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VEA_003822 368067f8340a5abdb7dd38ee9eb96fa9 301 Pfam PF02833 DHHA2 domain 180 297 2.0E-15 T 13-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VEA_001190 84b19063e3dea95fd5f6b754bca5775b 146 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 8 143 3.3E-27 T 13-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 VEA_000363 f8d75dc7624aeaaa3bbff5c471586375 312 TIGRFAM TIGR03414 ABC_choline_bnd: choline ABC transporter, periplasmic binding protein 22 307 5.7E-144 T 13-10-2018 IPR017783 Choline ABC transporter, substrate-binding protein GO:0015871|GO:0033265|GO:0042597 VEA_000363 f8d75dc7624aeaaa3bbff5c471586375 312 Gene3D G3DSA:3.40.190.100 109 218 1.6E-93 T 13-10-2018 VEA_000363 f8d75dc7624aeaaa3bbff5c471586375 312 Gene3D G3DSA:3.40.190.10 28 289 1.6E-93 T 13-10-2018 VEA_000363 f8d75dc7624aeaaa3bbff5c471586375 312 SUPERFAMILY SSF53850 20 296 8.25E-89 T 13-10-2018 VEA_000363 f8d75dc7624aeaaa3bbff5c471586375 312 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 27 279 1.1E-59 T 13-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 VEA_002385 3298da1f28c3713dc69ea077bfcdd3c6 162 Pfam PF04093 rod shape-determining protein MreD 9 154 4.5E-40 T 13-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 VEA_002385 3298da1f28c3713dc69ea077bfcdd3c6 162 PIRSF PIRSF018472 1 162 6.1E-42 T 13-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type VEA_002385 3298da1f28c3713dc69ea077bfcdd3c6 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 154 1.3E-36 T 13-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 VEA_004409 5d27945e0f0ebb10bf5aa51dcad7d125 309 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 9 302 44.222 T 13-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 VEA_004409 5d27945e0f0ebb10bf5aa51dcad7d125 309 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 13 302 5.8E-130 T 13-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 VEA_004409 5d27945e0f0ebb10bf5aa51dcad7d125 309 Gene3D G3DSA:3.40.50.10490 8 225 2.2E-83 T 13-10-2018 VEA_004409 5d27945e0f0ebb10bf5aa51dcad7d125 309 Gene3D G3DSA:1.10.8.1080 226 303 2.3E-29 T 13-10-2018 VEA_004409 5d27945e0f0ebb10bf5aa51dcad7d125 309 SUPERFAMILY SSF53697 12 255 1.21E-75 T 13-10-2018 VEA_004409 5d27945e0f0ebb10bf5aa51dcad7d125 309 Pfam PF13580 SIS domain 49 172 7.7E-11 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VEA_004409 5d27945e0f0ebb10bf5aa51dcad7d125 309 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 192 209 - T 13-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 VEA_000423 8f8f21dd658e829dfd42954ef93974b9 378 SUPERFAMILY SSF103473 6 369 4.58E-54 T 13-10-2018 IPR036259 MFS transporter superfamily VEA_000423 8f8f21dd658e829dfd42954ef93974b9 378 PRINTS PR01035 Tetracycline resistance protein signature 127 149 4.7E-5 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VEA_000423 8f8f21dd658e829dfd42954ef93974b9 378 PRINTS PR01035 Tetracycline resistance protein signature 4 20 4.7E-5 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VEA_000423 8f8f21dd658e829dfd42954ef93974b9 378 PRINTS PR01035 Tetracycline resistance protein signature 294 314 4.7E-5 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VEA_000423 8f8f21dd658e829dfd42954ef93974b9 378 Gene3D G3DSA:1.20.1720.10 7 371 3.6E-74 T 13-10-2018 VEA_000423 8f8f21dd658e829dfd42954ef93974b9 378 Pfam PF07690 Major Facilitator Superfamily 19 342 4.7E-42 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEA_002077 0a8cb1d547affe344860a19486521ab6 370 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 256 357 1.9E-25 T 13-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VEA_002077 0a8cb1d547affe344860a19486521ab6 370 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 3 366 1.2E-180 T 13-10-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 VEA_002077 0a8cb1d547affe344860a19486521ab6 370 SMART SM00876 256 359 3.3E-35 T 13-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VEA_002077 0a8cb1d547affe344860a19486521ab6 370 Pfam PF04055 Radical SAM superfamily 81 222 3.3E-10 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VEA_002077 0a8cb1d547affe344860a19486521ab6 370 SUPERFAMILY SSF102114 38 361 2.35E-56 T 13-10-2018 VEA_002077 0a8cb1d547affe344860a19486521ab6 370 Gene3D G3DSA:3.20.20.70 8 363 6.3E-108 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_002970 5edd228455f6db49ec06df660b37338a 321 Gene3D G3DSA:3.40.50.2300 46 292 2.3E-101 T 13-10-2018 VEA_002970 5edd228455f6db49ec06df660b37338a 321 Pfam PF04392 ABC transporter substrate binding protein 29 320 2.5E-112 T 13-10-2018 IPR007487 ABC transporter, substrate-binding protein VEA_002970 5edd228455f6db49ec06df660b37338a 321 SUPERFAMILY SSF53822 43 279 1.53E-18 T 13-10-2018 IPR028082 Periplasmic binding protein-like I VEA_002970 5edd228455f6db49ec06df660b37338a 321 Gene3D G3DSA:3.40.50.2300 143 314 2.3E-101 T 13-10-2018 VEA_003811 d9dfda6e2ea3b122a5928c04e10e0c1b 343 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 337 2.1E-85 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VEA_003811 d9dfda6e2ea3b122a5928c04e10e0c1b 343 Gene3D G3DSA:1.10.287.470 90 149 4.1E-73 T 13-10-2018 VEA_003811 d9dfda6e2ea3b122a5928c04e10e0c1b 343 Gene3D G3DSA:2.40.50.100 56 188 4.1E-73 T 13-10-2018 VEA_003811 d9dfda6e2ea3b122a5928c04e10e0c1b 343 SUPERFAMILY SSF111369 47 264 7.19E-33 T 13-10-2018 VEA_003811 d9dfda6e2ea3b122a5928c04e10e0c1b 343 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 58 258 5.0E-13 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VEA_003811 d9dfda6e2ea3b122a5928c04e10e0c1b 343 Gene3D G3DSA:2.40.420.20 35 334 4.1E-73 T 13-10-2018 VEA_003811 d9dfda6e2ea3b122a5928c04e10e0c1b 343 Gene3D G3DSA:2.40.30.170 41 267 4.1E-73 T 13-10-2018 VEA_002556 5e5125cee6b58219f255d6a2f12e4f41 556 Gene3D G3DSA:3.30.750.24 428 550 2.7E-14 T 13-10-2018 IPR036513 STAS domain superfamily VEA_002556 5e5125cee6b58219f255d6a2f12e4f41 556 SUPERFAMILY SSF52091 439 541 1.81E-11 T 13-10-2018 IPR036513 STAS domain superfamily VEA_002556 5e5125cee6b58219f255d6a2f12e4f41 556 Pfam PF01740 STAS domain 440 533 6.4E-12 T 13-10-2018 IPR002645 STAS domain VEA_002556 5e5125cee6b58219f255d6a2f12e4f41 556 Pfam PF00916 Sulfate permease family 11 376 9.9E-86 T 13-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VEA_000427 7314b74111bb0f0beec554ccbdff0635 743 Gene3D G3DSA:1.10.530.70 615 738 2.8E-10 T 13-10-2018 VEA_000427 7314b74111bb0f0beec554ccbdff0635 743 SUPERFAMILY SSF53955 518 721 3.66E-22 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily VEA_001004 5b9b35672e3539b20ae04cff2cb99e23 541 PIRSF PIRSF002741 1 541 2.9E-114 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VEA_001004 5b9b35672e3539b20ae04cff2cb99e23 541 Gene3D G3DSA:3.40.190.10 41 523 2.3E-183 T 13-10-2018 VEA_001004 5b9b35672e3539b20ae04cff2cb99e23 541 Gene3D G3DSA:3.90.76.10 71 194 2.3E-183 T 13-10-2018 VEA_001004 5b9b35672e3539b20ae04cff2cb99e23 541 SUPERFAMILY SSF53850 36 533 3.68E-141 T 13-10-2018 VEA_001004 5b9b35672e3539b20ae04cff2cb99e23 541 Gene3D G3DSA:3.10.105.10 296 511 2.3E-183 T 13-10-2018 VEA_001004 5b9b35672e3539b20ae04cff2cb99e23 541 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 82 462 2.8E-86 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain VEA_000750 9a375143c3d6a75233b1dfbc28d7ede8 498 SUPERFAMILY SSF103473 9 476 2.35E-19 T 13-10-2018 IPR036259 MFS transporter superfamily VEA_000750 9a375143c3d6a75233b1dfbc28d7ede8 498 Gene3D G3DSA:1.20.1250.20 7 475 2.2E-63 T 13-10-2018 VEA_000750 9a375143c3d6a75233b1dfbc28d7ede8 498 Pfam PF07690 Major Facilitator Superfamily 10 423 5.7E-13 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEA_003505 f786868468671df9d0f667bf2e44bc57 232 SUPERFAMILY SSF161098 15 222 1.7E-29 T 13-10-2018 IPR035906 MetI-like superfamily VEA_003505 f786868468671df9d0f667bf2e44bc57 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 220 2.2E-8 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_003505 f786868468671df9d0f667bf2e44bc57 232 Gene3D G3DSA:1.10.3720.10 2 228 4.2E-26 T 13-10-2018 IPR035906 MetI-like superfamily VEA_001985 d4ddf2163084c1ce2d2a314c08721ac0 175 Pfam PF12724 Flavodoxin domain 5 153 3.6E-51 T 13-10-2018 IPR026816 Flavodoxin domain VEA_001985 d4ddf2163084c1ce2d2a314c08721ac0 175 SUPERFAMILY SSF52218 3 158 1.76E-31 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VEA_001985 d4ddf2163084c1ce2d2a314c08721ac0 175 Gene3D G3DSA:3.40.50.360 2 113 1.1E-12 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VEA_001125 963b0c88ec822223ccde9c9af0d19522 166 Pfam PF02469 Fasciclin domain 43 165 2.7E-36 T 13-10-2018 IPR000782 FAS1 domain VEA_001125 963b0c88ec822223ccde9c9af0d19522 166 SMART SM00554 67 166 4.0E-32 T 13-10-2018 IPR000782 FAS1 domain VEA_001125 963b0c88ec822223ccde9c9af0d19522 166 SUPERFAMILY SSF82153 24 165 8.37E-43 T 13-10-2018 IPR036378 FAS1 domain superfamily VEA_001125 963b0c88ec822223ccde9c9af0d19522 166 Gene3D G3DSA:2.30.180.10 8 166 6.7E-51 T 13-10-2018 IPR036378 FAS1 domain superfamily VEA_001245 8b9bbdd1fb42809158943a724e0283c1 126 PIRSF PIRSF028770 1 126 1.9E-72 T 13-10-2018 IPR011223 Uncharacterised conserved protein UCP028770 VEA_001245 8b9bbdd1fb42809158943a724e0283c1 126 Pfam PF11742 Protein of unknown function (DUF3302) 3 78 1.3E-40 T 13-10-2018 IPR011223 Uncharacterised conserved protein UCP028770 VEA_003861 5ff2ed82321aa1a173c2203dd3d3de4f 418 SUPERFAMILY SSF53335 21 371 6.79E-92 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_003861 5ff2ed82321aa1a173c2203dd3d3de4f 418 PIRSF PIRSF003085 15 418 1.8E-120 T 13-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 VEA_003861 5ff2ed82321aa1a173c2203dd3d3de4f 418 Pfam PF02353 Mycolic acid cyclopropane synthetase 142 409 1.4E-81 T 13-10-2018 VEA_003861 5ff2ed82321aa1a173c2203dd3d3de4f 418 Gene3D G3DSA:3.40.50.150 149 418 3.9E-101 T 13-10-2018 VEA_002018 edc4b64de87b94c4c0a15a8b25ecb021 144 SUPERFAMILY SSF52218 2 142 3.56E-39 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VEA_002018 edc4b64de87b94c4c0a15a8b25ecb021 144 Pfam PF00258 Flavodoxin 4 136 4.2E-22 T 13-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VEA_002018 edc4b64de87b94c4c0a15a8b25ecb021 144 Gene3D G3DSA:3.40.50.360 1 144 5.2E-45 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VEA_000472 9f31e4f08fc0e588e054c7e728092d11 513 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 234 506 1.6E-60 T 13-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 VEA_000472 9f31e4f08fc0e588e054c7e728092d11 513 Gene3D G3DSA:3.40.1190.20 223 509 1.2E-79 T 13-10-2018 IPR029056 Ribokinase-like VEA_000472 9f31e4f08fc0e588e054c7e728092d11 513 Pfam PF01256 Carbohydrate kinase 253 500 6.3E-52 T 13-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 VEA_000472 9f31e4f08fc0e588e054c7e728092d11 513 Gene3D G3DSA:3.40.50.10260 5 219 6.9E-59 T 13-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 VEA_000472 9f31e4f08fc0e588e054c7e728092d11 513 PIRSF PIRSF017184 7 512 4.4E-133 T 13-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 VEA_000472 9f31e4f08fc0e588e054c7e728092d11 513 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 446 456 - T 13-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site VEA_000472 9f31e4f08fc0e588e054c7e728092d11 513 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 12 213 1.0E-51 T 13-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 VEA_000472 9f31e4f08fc0e588e054c7e728092d11 513 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 11 214 23.433 T 13-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 VEA_000472 9f31e4f08fc0e588e054c7e728092d11 513 SUPERFAMILY SSF64153 8 250 7.72E-65 T 13-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 VEA_000472 9f31e4f08fc0e588e054c7e728092d11 513 Pfam PF03853 YjeF-related protein N-terminus 32 193 4.0E-43 T 13-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 VEA_000472 9f31e4f08fc0e588e054c7e728092d11 513 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 229 511 21.786 T 13-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 VEA_000472 9f31e4f08fc0e588e054c7e728092d11 513 SUPERFAMILY SSF53613 229 507 1.64E-71 T 13-10-2018 IPR029056 Ribokinase-like VEA_003335 810688efe118b42930aa2d89cedd85d3 283 Pfam PF16806 Antiactivator protein ExsD 9 266 5.6E-79 T 13-10-2018 IPR031835 Antiactivator protein ExsD VEA_004492 03d264eb377d725f2f4a1ae40a71aba9 437 Gene3D G3DSA:3.90.190.20 300 433 1.4E-39 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VEA_004492 03d264eb377d725f2f4a1ae40a71aba9 437 Pfam PF02875 Mur ligase family, glutamate ligase domain 302 355 2.8E-7 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VEA_004492 03d264eb377d725f2f4a1ae40a71aba9 437 Pfam PF08245 Mur ligase middle domain 113 279 9.6E-31 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VEA_004492 03d264eb377d725f2f4a1ae40a71aba9 437 SUPERFAMILY SSF53623 98 297 7.59E-55 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VEA_004492 03d264eb377d725f2f4a1ae40a71aba9 437 SUPERFAMILY SSF53244 299 435 1.19E-43 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VEA_004492 03d264eb377d725f2f4a1ae40a71aba9 437 Gene3D G3DSA:3.40.1190.10 97 299 3.7E-69 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VEA_004492 03d264eb377d725f2f4a1ae40a71aba9 437 Gene3D G3DSA:3.40.50.720 6 96 1.4E-18 T 13-10-2018 VEA_004492 03d264eb377d725f2f4a1ae40a71aba9 437 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 10 434 6.9E-133 T 13-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VEA_004492 03d264eb377d725f2f4a1ae40a71aba9 437 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 8 436 33.333 T 13-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VEA_004492 03d264eb377d725f2f4a1ae40a71aba9 437 SUPERFAMILY SSF51984 9 97 2.22E-15 T 13-10-2018 VEA_003291 9ec4fba56471cc9b2c20431e54d3f7bc 113 Pfam PF13673 Acetyltransferase (GNAT) domain 8 104 1.5E-8 T 13-10-2018 IPR000182 GNAT domain VEA_003291 9ec4fba56471cc9b2c20431e54d3f7bc 113 Gene3D G3DSA:3.40.630.30 2 105 1.7E-15 T 13-10-2018 VEA_003291 9ec4fba56471cc9b2c20431e54d3f7bc 113 SUPERFAMILY SSF55729 4 101 9.73E-15 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_001755 f921936535ba36c08cc2b1a1aee70c17 206 Gene3D G3DSA:1.10.10.10 2 85 2.5E-10 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001755 f921936535ba36c08cc2b1a1aee70c17 206 SUPERFAMILY SSF46785 5 183 4.28E-36 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_001755 f921936535ba36c08cc2b1a1aee70c17 206 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 46 2.0E-7 T 13-10-2018 VEA_001706 2d17a81dc52c831e1eae22b538261a9b 476 Gene3D G3DSA:2.40.30.10 242 327 2.1E-26 T 13-10-2018 VEA_001706 2d17a81dc52c831e1eae22b538261a9b 476 SUPERFAMILY SSF50447 243 324 2.43E-23 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VEA_001706 2d17a81dc52c831e1eae22b538261a9b 476 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 18 474 53.794 T 13-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 VEA_001706 2d17a81dc52c831e1eae22b538261a9b 476 Pfam PF00009 Elongation factor Tu GTP binding domain 26 233 1.7E-44 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_001706 2d17a81dc52c831e1eae22b538261a9b 476 Gene3D G3DSA:3.40.50.300 6 239 3.0E-71 T 13-10-2018 VEA_001706 2d17a81dc52c831e1eae22b538261a9b 476 Gene3D G3DSA:2.40.30.10 331 434 9.0E-30 T 13-10-2018 VEA_001706 2d17a81dc52c831e1eae22b538261a9b 476 SUPERFAMILY SSF52540 19 235 3.89E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001706 2d17a81dc52c831e1eae22b538261a9b 476 PRINTS PR00315 GTP-binding elongation factor signature 125 136 5.9E-13 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_001706 2d17a81dc52c831e1eae22b538261a9b 476 PRINTS PR00315 GTP-binding elongation factor signature 109 119 5.9E-13 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_001706 2d17a81dc52c831e1eae22b538261a9b 476 PRINTS PR00315 GTP-binding elongation factor signature 89 97 5.9E-13 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_001706 2d17a81dc52c831e1eae22b538261a9b 476 PRINTS PR00315 GTP-binding elongation factor signature 162 171 5.9E-13 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_001706 2d17a81dc52c831e1eae22b538261a9b 476 PRINTS PR00315 GTP-binding elongation factor signature 28 41 5.9E-13 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VEA_001706 2d17a81dc52c831e1eae22b538261a9b 476 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 27 433 1.2E-197 T 13-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 VEA_001706 2d17a81dc52c831e1eae22b538261a9b 476 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 33 212 2.2E-12 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VEA_001706 2d17a81dc52c831e1eae22b538261a9b 476 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 82 97 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site VEA_001706 2d17a81dc52c831e1eae22b538261a9b 476 SUPERFAMILY SSF50465 332 434 3.36E-30 T 13-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VEA_003365 d5f71c7580d4446c81f4189f2e85d69f 153 Pfam PF07321 Type III secretion protein YscO 2 149 1.1E-39 T 13-10-2018 IPR009929 Type III secretion sytem,YscO VEA_002683 936e07948bae4406a788942b0a7f6ac0 607 Pfam PF00884 Sulfatase 250 521 1.3E-32 T 13-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VEA_002683 936e07948bae4406a788942b0a7f6ac0 607 PIRSF PIRSF004950 1 606 2.3E-234 T 13-10-2018 IPR012159 Inner membrane protein YejM VEA_002683 936e07948bae4406a788942b0a7f6ac0 607 SUPERFAMILY SSF53649 247 571 4.36E-60 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VEA_002683 936e07948bae4406a788942b0a7f6ac0 607 Pfam PF11893 Domain of unknown function (DUF3413) 3 242 3.1E-50 T 13-10-2018 IPR024588 Inner membrane protein YejM, N-terminal VEA_002683 936e07948bae4406a788942b0a7f6ac0 607 Gene3D G3DSA:3.40.720.10 238 528 2.3E-52 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VEA_003743 5dc17354e240306561919e907587ac8b 218 Gene3D G3DSA:2.60.120.620 1 215 1.9E-54 T 13-10-2018 VEA_003743 5dc17354e240306561919e907587ac8b 218 Pfam PF10014 2OG-Fe dioxygenase 24 208 3.4E-54 T 13-10-2018 IPR018724 2OG-Fe dioxygenase VEA_001544 23db0b195b52e24136b33e2c2f890fa0 124 Pfam PF00376 MerR family regulatory protein 5 40 8.8E-10 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEA_001544 23db0b195b52e24136b33e2c2f890fa0 124 SUPERFAMILY SSF46955 3 112 1.76E-25 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily VEA_001544 23db0b195b52e24136b33e2c2f890fa0 124 Gene3D G3DSA:1.10.1660.10 1 124 1.6E-26 T 13-10-2018 VEA_001544 23db0b195b52e24136b33e2c2f890fa0 124 SMART SM00422 4 71 6.0E-20 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VEA_001544 23db0b195b52e24136b33e2c2f890fa0 124 Pfam PF09278 MerR, DNA binding 47 110 1.9E-16 T 13-10-2018 IPR015358 Transcription regulator MerR, DNA binding VEA_002188 949299f4909427106130255e379ea98e 447 PIRSF PIRSF006060 1 446 9.4E-51 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VEA_002188 949299f4909427106130255e379ea98e 447 Pfam PF13520 Amino acid permease 8 421 1.4E-36 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VEA_002188 949299f4909427106130255e379ea98e 447 Gene3D G3DSA:1.20.1740.10 1 440 4.1E-58 T 13-10-2018 VEA_003345 f316288826c27f01e7068a87f42097dc 221 Pfam PF06578 YOP proteins translocation protein K (YscK) 10 221 4.2E-68 T 13-10-2018 IPR009510 Type III secretion system, secretion protein K GO:0009405 VEA_003345 f316288826c27f01e7068a87f42097dc 221 ProDom PD023059 PLASMID TYPE PROTEINS YOP III YSCK VIRULENCE K TRANSLOCATION PSCK 14 220 3.0E-81 T 13-10-2018 IPR009510 Type III secretion system, secretion protein K GO:0009405 VEA_003418 f8af00bc62cd3a5597b1c0d84dbc125b 342 SMART SM00062 38 267 2.0E-54 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEA_003418 f8af00bc62cd3a5597b1c0d84dbc125b 342 Gene3D G3DSA:3.40.190.10 28 257 7.6E-51 T 13-10-2018 VEA_003418 f8af00bc62cd3a5597b1c0d84dbc125b 342 SUPERFAMILY SSF53850 29 258 2.04E-49 T 13-10-2018 VEA_003418 f8af00bc62cd3a5597b1c0d84dbc125b 342 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 257 7.1E-30 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEA_003418 f8af00bc62cd3a5597b1c0d84dbc125b 342 Gene3D G3DSA:3.40.190.10 130 225 7.6E-51 T 13-10-2018 VEA_003536 a9ea15daf58900e1a950bc6983b2f2f3 390 SUPERFAMILY SSF53756 10 359 5.08E-26 T 13-10-2018 VEA_003536 a9ea15daf58900e1a950bc6983b2f2f3 390 Gene3D G3DSA:3.40.50.2000 175 350 1.7E-18 T 13-10-2018 VEA_003536 a9ea15daf58900e1a950bc6983b2f2f3 390 Gene3D G3DSA:3.40.50.2000 10 358 1.7E-18 T 13-10-2018 VEA_003536 a9ea15daf58900e1a950bc6983b2f2f3 390 Pfam PF00534 Glycosyl transferases group 1 193 339 5.3E-11 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 VEA_002359 3ec5e914eb8fbfd5bad1e5117728f3c6 561 Pfam PF15864 Protein glycosylation ligase 142 167 8.6E-11 T 13-10-2018 IPR031726 Protein glycosylation ligase domain VEA_002359 3ec5e914eb8fbfd5bad1e5117728f3c6 561 Pfam PF04932 O-Antigen ligase 189 336 9.2E-14 T 13-10-2018 IPR007016 O-antigen ligase-related VEA_002359 3ec5e914eb8fbfd5bad1e5117728f3c6 561 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 358 547 2.1E-63 T 13-10-2018 IPR021797 Virulence factor membrane-bound polymerase, C-terminal VEA_000745 fc14e2b9d7d6d5e0ed048664b75a8005 172 ProSitePatterns PS00893 Nudix box signature. 52 73 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VEA_000745 fc14e2b9d7d6d5e0ed048664b75a8005 172 Gene3D G3DSA:3.90.79.10 13 151 8.2E-26 T 13-10-2018 VEA_000745 fc14e2b9d7d6d5e0ed048664b75a8005 172 SUPERFAMILY SSF55811 9 143 4.47E-21 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VEA_000745 fc14e2b9d7d6d5e0ed048664b75a8005 172 Pfam PF00293 NUDIX domain 23 145 1.6E-15 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VEA_000305 c3cbb5e78c713766d735e9c9042868d4 576 SUPERFAMILY SSF53300 99 272 1.15E-16 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VEA_000305 c3cbb5e78c713766d735e9c9042868d4 576 Pfam PF13519 von Willebrand factor type A domain 102 207 3.4E-13 T 13-10-2018 IPR002035 von Willebrand factor, type A VEA_000305 c3cbb5e78c713766d735e9c9042868d4 576 Gene3D G3DSA:3.40.50.410 97 281 4.3E-26 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VEA_001602 af0610ec19e5b0a9e1b452b74e393466 830 Gene3D G3DSA:3.40.228.10 78 281 1.9E-154 T 13-10-2018 VEA_001602 af0610ec19e5b0a9e1b452b74e393466 830 Gene3D G3DSA:2.40.40.20 521 646 2.8E-23 T 13-10-2018 VEA_001602 af0610ec19e5b0a9e1b452b74e393466 830 Gene3D G3DSA:3.40.50.740 13 455 1.9E-154 T 13-10-2018 VEA_001602 af0610ec19e5b0a9e1b452b74e393466 830 Pfam PF01568 Molydopterin dinucleotide binding domain 523 633 6.5E-19 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VEA_001602 af0610ec19e5b0a9e1b452b74e393466 830 SUPERFAMILY SSF53706 2 509 9.03E-147 T 13-10-2018 VEA_001602 af0610ec19e5b0a9e1b452b74e393466 830 SUPERFAMILY SSF50692 498 638 6.1E-24 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VEA_001602 af0610ec19e5b0a9e1b452b74e393466 830 Gene3D G3DSA:1.10.10.1100 760 815 1.6E-14 T 13-10-2018 VEA_001602 af0610ec19e5b0a9e1b452b74e393466 830 Pfam PF04324 BFD-like [2Fe-2S] binding domain 760 809 1.1E-12 T 13-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain VEA_001602 af0610ec19e5b0a9e1b452b74e393466 830 Pfam PF00384 Molybdopterin oxidoreductase 4 425 6.4E-77 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEA_003882 b2fe211e5d38dcb7829358dc9a5244c8 398 Gene3D G3DSA:3.40.50.150 103 238 8.0E-6 T 13-10-2018 VEA_003882 b2fe211e5d38dcb7829358dc9a5244c8 398 Pfam PF13679 Methyltransferase domain 108 230 5.0E-18 T 13-10-2018 IPR025714 Methyltransferase domain VEA_003882 b2fe211e5d38dcb7829358dc9a5244c8 398 SUPERFAMILY SSF53335 125 197 8.81E-7 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_002312 c03d8c6e3abe02d6f6b7673ee811a71c 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 37.775 T 13-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VEA_002312 c03d8c6e3abe02d6f6b7673ee811a71c 334 SUPERFAMILY SSF51735 1 172 2.43E-40 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_002312 c03d8c6e3abe02d6f6b7673ee811a71c 334 Gene3D G3DSA:3.30.360.10 153 312 7.2E-121 T 13-10-2018 VEA_002312 c03d8c6e3abe02d6f6b7673ee811a71c 334 Gene3D G3DSA:3.40.50.720 6 329 7.2E-121 T 13-10-2018 VEA_002312 c03d8c6e3abe02d6f6b7673ee811a71c 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 13-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VEA_002312 c03d8c6e3abe02d6f6b7673ee811a71c 334 SUPERFAMILY SSF55347 154 308 1.44E-49 T 13-10-2018 VEA_002312 c03d8c6e3abe02d6f6b7673ee811a71c 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 164 311 2.5E-14 T 13-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VEA_002312 c03d8c6e3abe02d6f6b7673ee811a71c 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 146 1.9E-31 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VEA_002312 c03d8c6e3abe02d6f6b7673ee811a71c 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 7.4E-119 T 13-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VEA_002312 c03d8c6e3abe02d6f6b7673ee811a71c 334 SMART SM00859 3 146 4.5E-43 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VEA_004529 22e25a6a9a2e28763630c7628902bf3c 419 Pfam PF01384 Phosphate transporter family 26 407 9.7E-113 T 13-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 VEA_000633 6bec2f39e84871687bbccf1fcfdb4e4f 335 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 48 328 3.7E-68 T 13-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VEA_000633 6bec2f39e84871687bbccf1fcfdb4e4f 335 SUPERFAMILY SSF53187 5 328 1.65E-55 T 13-10-2018 VEA_000633 6bec2f39e84871687bbccf1fcfdb4e4f 335 Gene3D G3DSA:3.40.630.10 1 330 1.1E-105 T 13-10-2018 VEA_000633 6bec2f39e84871687bbccf1fcfdb4e4f 335 PIRSF PIRSF039012 1 333 1.2E-79 T 13-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VEA_000633 6bec2f39e84871687bbccf1fcfdb4e4f 335 TIGRFAM TIGR02994 ectoine_eutE: ectoine utilization protein EutE 2 328 8.9E-146 T 13-10-2018 IPR014336 N-alpha-acetyl diaminobutyrate deacetylase DoeB KEGG: 00260+3.5.1.125|MetaCyc: PWY-7855 VEA_000908 882fe308477db5ae74814a998a0c68aa 126 SUPERFAMILY SSF46785 2 40 5.38E-9 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000908 882fe308477db5ae74814a998a0c68aa 126 Gene3D G3DSA:3.30.70.920 34 117 1.3E-20 T 13-10-2018 VEA_000908 882fe308477db5ae74814a998a0c68aa 126 SMART SM00344 1 90 1.6E-16 T 13-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VEA_000908 882fe308477db5ae74814a998a0c68aa 126 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 28 1.5E-8 T 13-10-2018 VEA_000908 882fe308477db5ae74814a998a0c68aa 126 SUPERFAMILY SSF54909 43 125 6.57E-17 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel VEA_000908 882fe308477db5ae74814a998a0c68aa 126 Pfam PF01037 Lrp/AsnC ligand binding domain 47 121 5.7E-17 T 13-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VEA_000908 882fe308477db5ae74814a998a0c68aa 126 Gene3D G3DSA:1.10.10.10 1 33 2.6E-12 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_003124 cbdcfeeb27579631aaf06690ca3a6b6f 460 PIRSF PIRSF028099 6 460 9.8E-184 T 13-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase VEA_003124 cbdcfeeb27579631aaf06690ca3a6b6f 460 Gene3D G3DSA:1.10.760.10 313 460 1.4E-8 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEA_003124 cbdcfeeb27579631aaf06690ca3a6b6f 460 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 22 460 9.8E-144 T 13-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase VEA_003124 cbdcfeeb27579631aaf06690ca3a6b6f 460 SUPERFAMILY SSF46626 319 460 1.11E-23 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEA_003788 6e5776007eb1944008f255bdcd690e11 140 Gene3D G3DSA:3.40.630.30 1 136 8.8E-26 T 13-10-2018 VEA_003788 6e5776007eb1944008f255bdcd690e11 140 Pfam PF00583 Acetyltransferase (GNAT) family 17 112 2.5E-15 T 13-10-2018 IPR000182 GNAT domain VEA_003788 6e5776007eb1944008f255bdcd690e11 140 SUPERFAMILY SSF55729 8 129 8.1E-23 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_000206 3fe010c975f1fc52f623cfa7bb87c3f0 156 Pfam PF05981 CreA protein 24 144 1.4E-42 T 13-10-2018 IPR010292 Uncharacterised protein family CreA VEA_000206 3fe010c975f1fc52f623cfa7bb87c3f0 156 PIRSF PIRSF003174 1 155 1.6E-47 T 13-10-2018 IPR010292 Uncharacterised protein family CreA VEA_001831 502653ee60de16ae109569d1a222d7f9 377 PIRSF PIRSF034888 1 376 4.4E-52 T 13-10-2018 IPR014592 Predicted P-loop ATP-binding protein, VCA0200 VEA_001831 502653ee60de16ae109569d1a222d7f9 377 Gene3D G3DSA:3.40.50.300 1 323 3.4E-24 T 13-10-2018 VEA_001831 502653ee60de16ae109569d1a222d7f9 377 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 23 317 2.3E-17 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VEA_001831 502653ee60de16ae109569d1a222d7f9 377 SUPERFAMILY SSF52540 1 316 5.33E-18 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001831 502653ee60de16ae109569d1a222d7f9 377 Pfam PF12476 Protein of unknown function (DUF3696) 328 374 3.9E-15 T 13-10-2018 IPR022532 Domain of unknown function DUF3696, C-terminal VEA_001685 1084e3ef684b59b7ba85b420897ed195 516 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 344 500 2.1E-7 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_001685 1084e3ef684b59b7ba85b420897ed195 516 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 52 244 5.5E-8 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_001685 1084e3ef684b59b7ba85b420897ed195 516 Gene3D G3DSA:1.10.3720.10 1 249 2.3E-42 T 13-10-2018 IPR035906 MetI-like superfamily VEA_001685 1084e3ef684b59b7ba85b420897ed195 516 Gene3D G3DSA:1.10.3720.10 271 515 4.3E-28 T 13-10-2018 IPR035906 MetI-like superfamily VEA_001685 1084e3ef684b59b7ba85b420897ed195 516 SUPERFAMILY SSF161098 24 245 2.62E-41 T 13-10-2018 IPR035906 MetI-like superfamily VEA_001685 1084e3ef684b59b7ba85b420897ed195 516 SUPERFAMILY SSF161098 271 509 2.09E-32 T 13-10-2018 IPR035906 MetI-like superfamily VEA_001685 1084e3ef684b59b7ba85b420897ed195 516 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 3 506 4.7E-161 T 13-10-2018 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 VEA_004279 2727213f462e571bce6a11ef07893d95 102 Pfam PF12286 Protein of unknown function (DUF3622) 1 71 1.6E-35 T 13-10-2018 IPR022069 Protein of unknown function DUF3622 VEA_002164 5baba2ae7988e96fc557f9182a168225 307 PIRSF PIRSF000545 1 307 5.6E-144 T 13-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 VEA_002164 5baba2ae7988e96fc557f9182a168225 307 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 3 307 9.5E-144 T 13-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 VEA_002164 5baba2ae7988e96fc557f9182a168225 307 SUPERFAMILY SSF52540 3 306 1.11E-73 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002164 5baba2ae7988e96fc557f9182a168225 307 Hamap MF_00215 Pantothenate kinase [coaA]. 1 307 177.127 T 13-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 VEA_002164 5baba2ae7988e96fc557f9182a168225 307 Gene3D G3DSA:3.40.50.300 1 307 2.3E-91 T 13-10-2018 VEA_002164 5baba2ae7988e96fc557f9182a168225 307 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 82 228 7.3E-12 T 13-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 VEA_002701 4ce4d61fab44e4f176c410f3bca7c44f 219 SUPERFAMILY SSF51182 113 202 7.86E-11 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily VEA_002701 4ce4d61fab44e4f176c410f3bca7c44f 219 Pfam PF12973 ChrR Cupin-like domain 127 193 2.3E-12 T 13-10-2018 IPR025979 ChrR-like cupin domain VEA_002701 4ce4d61fab44e4f176c410f3bca7c44f 219 Gene3D G3DSA:1.10.10.1320 1 105 7.5E-15 T 13-10-2018 VEA_002701 4ce4d61fab44e4f176c410f3bca7c44f 219 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 3 216 3.4E-75 T 13-10-2018 IPR012807 Anti-sigma factor ChrR, putative VEA_002701 4ce4d61fab44e4f176c410f3bca7c44f 219 Gene3D G3DSA:2.60.120.10 108 197 3.1E-23 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VEA_000077 0128e20c7444eb57f174b147e7a81d0d 245 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 211 231 1.0E-5 T 13-10-2018 IPR024726 Ferric iron reductase, C-terminal GO:0051537 VEA_000077 0128e20c7444eb57f174b147e7a81d0d 245 TIGRFAM TIGR03950 sidero_Fe_reduc: siderophore ferric iron reductase, AHA_1954 family 9 231 5.3E-89 T 13-10-2018 IPR023998 Siderophore ferric iron reductase, AHA1954 family VEA_001665 9dd6db9b2052e138739433ba7b4c3534 269 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 264 55.519 T 13-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 VEA_001665 9dd6db9b2052e138739433ba7b4c3534 269 SUPERFAMILY SSF53335 8 267 5.31E-80 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_001665 9dd6db9b2052e138739433ba7b4c3534 269 Gene3D G3DSA:3.40.50.150 1 198 1.4E-65 T 13-10-2018 VEA_001665 9dd6db9b2052e138739433ba7b4c3534 269 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 13-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 VEA_001665 9dd6db9b2052e138739433ba7b4c3534 269 Gene3D G3DSA:1.10.8.100 200 267 1.4E-24 T 13-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 VEA_001665 9dd6db9b2052e138739433ba7b4c3534 269 SMART SM00650 25 197 5.2E-89 T 13-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 VEA_001665 9dd6db9b2052e138739433ba7b4c3534 269 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 10 263 1.7E-88 T 13-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 VEA_001665 9dd6db9b2052e138739433ba7b4c3534 269 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 264 5.8E-78 T 13-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm VEA_000304 d578f84d86d3bd859cd6b4f7b2517e67 438 Pfam PF13584 Oxygen tolerance 70 299 3.6E-25 T 13-10-2018 IPR025738 Aerotolerance-related protein BatD VEA_001794 e4717b96bc0bada4ae335c6cec5c9d95 352 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 3 344 8.2E-150 T 13-10-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 VEA_001794 e4717b96bc0bada4ae335c6cec5c9d95 352 Gene3D G3DSA:3.40.50.2000 2 150 3.3E-53 T 13-10-2018 VEA_001794 e4717b96bc0bada4ae335c6cec5c9d95 352 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 70 326 6.4E-70 T 13-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 VEA_001794 e4717b96bc0bada4ae335c6cec5c9d95 352 Gene3D G3DSA:3.40.50.2000 166 346 4.2E-60 T 13-10-2018 VEA_001794 e4717b96bc0bada4ae335c6cec5c9d95 352 SUPERFAMILY SSF53756 2 344 2.35E-97 T 13-10-2018 VEA_004065 d5fc703d0565f725ccf050f015599793 85 Hamap MF_01217 Acyl carrier protein [acpP]. 8 82 13.639 T 13-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 VEA_004065 d5fc703d0565f725ccf050f015599793 85 Gene3D G3DSA:1.10.1200.10 3 85 2.0E-17 T 13-10-2018 IPR036736 ACP-like superfamily VEA_004065 d5fc703d0565f725ccf050f015599793 85 Pfam PF00550 Phosphopantetheine attachment site 11 78 6.0E-11 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain VEA_004065 d5fc703d0565f725ccf050f015599793 85 SUPERFAMILY SSF47336 4 83 1.57E-18 T 13-10-2018 IPR036736 ACP-like superfamily VEA_003683 2f0776a33cd353530c7154993252f90a 407 Gene3D G3DSA:1.20.1250.20 5 389 1.2E-43 T 13-10-2018 VEA_003683 2f0776a33cd353530c7154993252f90a 407 SUPERFAMILY SSF103473 9 392 7.06E-53 T 13-10-2018 IPR036259 MFS transporter superfamily VEA_003683 2f0776a33cd353530c7154993252f90a 407 ProSitePatterns PS00216 Sugar transport proteins signature 1. 66 82 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 VEA_003683 2f0776a33cd353530c7154993252f90a 407 Pfam PF07690 Major Facilitator Superfamily 16 352 9.9E-34 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEA_000673 48ca930c8b9c10f7f093b5df0188af33 281 Gene3D G3DSA:1.25.40.10 97 269 1.6E-16 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_000673 48ca930c8b9c10f7f093b5df0188af33 281 SUPERFAMILY SSF48452 172 259 1.43E-16 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_000673 48ca930c8b9c10f7f093b5df0188af33 281 Pfam PF13181 Tetratricopeptide repeat 221 252 6.8E-5 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_000673 48ca930c8b9c10f7f093b5df0188af33 281 SMART SM00028 220 253 0.0019 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_000673 48ca930c8b9c10f7f093b5df0188af33 281 SMART SM00028 186 219 13.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_002720 445357419ef4c5efdb1817101bfac53c 848 Gene3D G3DSA:2.60.40.10 431 523 2.2E-20 T 13-10-2018 IPR013783 Immunoglobulin-like fold VEA_002720 445357419ef4c5efdb1817101bfac53c 848 Gene3D G3DSA:3.20.20.80 524 844 3.1E-77 T 13-10-2018 VEA_002720 445357419ef4c5efdb1817101bfac53c 848 SMART SM00636 525 827 2.4E-4 T 13-10-2018 IPR011583 Chitinase II GO:0008061 VEA_002720 445357419ef4c5efdb1817101bfac53c 848 ProSitePatterns PS01095 Chitinases family 18 active site. 639 647 - T 13-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VEA_002720 445357419ef4c5efdb1817101bfac53c 848 SMART SM00495 28 74 8.0E-10 T 13-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VEA_002720 445357419ef4c5efdb1817101bfac53c 848 SMART SM00495 279 328 0.002 T 13-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VEA_002720 445357419ef4c5efdb1817101bfac53c 848 Gene3D G3DSA:2.60.40.10 179 272 6.8E-21 T 13-10-2018 IPR013783 Immunoglobulin-like fold VEA_002720 445357419ef4c5efdb1817101bfac53c 848 Gene3D G3DSA:2.60.40.10 337 429 1.3E-22 T 13-10-2018 IPR013783 Immunoglobulin-like fold VEA_002720 445357419ef4c5efdb1817101bfac53c 848 Gene3D G3DSA:2.60.40.10 84 175 7.3E-21 T 13-10-2018 IPR013783 Immunoglobulin-like fold VEA_002720 445357419ef4c5efdb1817101bfac53c 848 Gene3D G3DSA:2.10.10.20 9 79 1.9E-11 T 13-10-2018 VEA_002720 445357419ef4c5efdb1817101bfac53c 848 Pfam PF00704 Glycosyl hydrolases family 18 527 827 3.0E-24 T 13-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 VEA_002720 445357419ef4c5efdb1817101bfac53c 848 SUPERFAMILY SSF51055 17 78 5.36E-13 T 13-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VEA_002720 445357419ef4c5efdb1817101bfac53c 848 SUPERFAMILY SSF51445 524 835 2.11E-48 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VEA_001101 a5d0fb996854cc2872cd9e0ebc09d7b5 293 Pfam PF04018 Domain of unknown function (DUF368) 1 245 1.3E-96 T 13-10-2018 IPR007163 Protein of unknown function DUF368 VEA_003157 ef17d47405912f931cffe01a842e5aeb 199 Gene3D G3DSA:3.90.79.10 16 195 4.9E-48 T 13-10-2018 VEA_003157 ef17d47405912f931cffe01a842e5aeb 199 Pfam PF00293 NUDIX domain 46 158 3.6E-13 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VEA_003157 ef17d47405912f931cffe01a842e5aeb 199 SUPERFAMILY SSF55811 33 189 5.96E-34 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VEA_002834 7e0da4888a790d9cae0cf7df6b88a84c 246 Pfam PF04344 Chemotaxis phosphatase, CheZ 37 246 4.1E-77 T 13-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 VEA_002834 7e0da4888a790d9cae0cf7df6b88a84c 246 Gene3D G3DSA:1.10.287.500 55 189 2.5E-46 T 13-10-2018 VEA_002834 7e0da4888a790d9cae0cf7df6b88a84c 246 PIRSF PIRSF002884 13 246 1.7E-90 T 13-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 VEA_002834 7e0da4888a790d9cae0cf7df6b88a84c 246 SUPERFAMILY SSF75708 26 245 8.89E-66 T 13-10-2018 VEA_002563 615be670a59675e3cad01e68a6c32037 453 Pfam PF12626 Polymerase A arginine-rich C-terminus 328 445 2.4E-38 T 13-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain VEA_002563 615be670a59675e3cad01e68a6c32037 453 SUPERFAMILY SSF81301 24 179 3.16E-40 T 13-10-2018 VEA_002563 615be670a59675e3cad01e68a6c32037 453 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 209 270 2.5E-21 T 13-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 VEA_002563 615be670a59675e3cad01e68a6c32037 453 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 21 452 8.9E-163 T 13-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 VEA_002563 615be670a59675e3cad01e68a6c32037 453 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 8 452 37.745 T 13-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 VEA_002563 615be670a59675e3cad01e68a6c32037 453 Pfam PF01743 Poly A polymerase head domain 52 182 5.6E-39 T 13-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 VEA_002563 615be670a59675e3cad01e68a6c32037 453 Gene3D G3DSA:1.10.3090.10 180 430 8.9E-94 T 13-10-2018 VEA_002563 615be670a59675e3cad01e68a6c32037 453 SUPERFAMILY SSF81891 180 417 8.63E-48 T 13-10-2018 VEA_002563 615be670a59675e3cad01e68a6c32037 453 Gene3D G3DSA:3.30.460.10 18 178 1.2E-63 T 13-10-2018 VEA_002389 8e9b92a85c28d91522dd625519cb826f 273 Gene3D G3DSA:3.60.110.10 1 268 2.8E-88 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VEA_002389 8e9b92a85c28d91522dd625519cb826f 273 SUPERFAMILY SSF56317 3 263 5.23E-79 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VEA_002389 8e9b92a85c28d91522dd625519cb826f 273 Pfam PF00795 Carbon-nitrogen hydrolase 3 256 1.0E-54 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 VEA_002389 8e9b92a85c28d91522dd625519cb826f 273 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 149 169 - T 13-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site VEA_002989 4f7f12f333785f27873f736b899dc1ed 314 SMART SM00363 20 77 7.0E-8 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_002989 4f7f12f333785f27873f736b899dc1ed 314 SUPERFAMILY SSF55120 92 309 8.32E-64 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEA_002989 4f7f12f333785f27873f736b899dc1ed 314 Gene3D G3DSA:3.10.290.10 8 75 2.9E-17 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VEA_002989 4f7f12f333785f27873f736b899dc1ed 314 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 141 155 - T 13-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEA_002989 4f7f12f333785f27873f736b899dc1ed 314 Gene3D G3DSA:3.30.2350.10 93 314 6.4E-79 T 13-10-2018 VEA_002989 4f7f12f333785f27873f736b899dc1ed 314 Pfam PF01479 S4 domain 20 66 2.9E-10 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VEA_002989 4f7f12f333785f27873f736b899dc1ed 314 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 311 2.5E-92 T 13-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEA_002989 4f7f12f333785f27873f736b899dc1ed 314 Pfam PF00849 RNA pseudouridylate synthase 102 247 1.2E-31 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEA_002989 4f7f12f333785f27873f736b899dc1ed 314 SUPERFAMILY SSF55174 19 71 4.27E-9 T 13-10-2018 VEA_003050 54d95eceb8fb77406a220f77415717c0 232 Gene3D G3DSA:3.40.50.300 4 230 4.2E-72 T 13-10-2018 VEA_003050 54d95eceb8fb77406a220f77415717c0 232 SUPERFAMILY SSF52540 6 227 1.2E-75 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003050 54d95eceb8fb77406a220f77415717c0 232 Pfam PF00005 ABC transporter 26 174 4.2E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_003050 54d95eceb8fb77406a220f77415717c0 232 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_003050 54d95eceb8fb77406a220f77415717c0 232 SMART SM00382 35 222 6.4E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_002657 cc950cbe8b03ce72ccc3d0b76c8aa264 150 Pfam PF04074 Domain of unknown function (DUF386) 3 140 9.0E-26 T 13-10-2018 IPR004375 YhcH/YjgK/YiaL family VEA_002657 cc950cbe8b03ce72ccc3d0b76c8aa264 150 Gene3D G3DSA:2.60.120.370 1 143 5.6E-14 T 13-10-2018 IPR037012 YhcH/YjgK/YiaL superfamily VEA_002657 cc950cbe8b03ce72ccc3d0b76c8aa264 150 SUPERFAMILY SSF51197 1 143 2.55E-24 T 13-10-2018 VEA_001750 e1e547ccc0781b1f29fac9bbd2f31549 305 Pfam PF01040 UbiA prenyltransferase family 21 270 8.3E-38 T 13-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 VEA_001750 e1e547ccc0781b1f29fac9bbd2f31549 305 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 13 295 9.8E-100 T 13-10-2018 VEA_001750 e1e547ccc0781b1f29fac9bbd2f31549 305 PIRSF PIRSF005355 1 303 4.0E-85 T 13-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 VEA_001750 e1e547ccc0781b1f29fac9bbd2f31549 305 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 4 298 20.771 T 13-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 VEA_003441 f9341dd3e9af248514231ba2164cd64c 558 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 539 558 9.8E-4 T 13-10-2018 IPR020008 GlyGly-CTERM domain VEA_003441 f9341dd3e9af248514231ba2164cd64c 558 Pfam PF11949 Protein of unknown function (DUF3466) 238 558 4.8E-53 T 13-10-2018 IPR022562 Protein of unknown function DUF3466 VEA_001555 23563a48e68e34a453d0d9b980ae2419 200 Gene3D G3DSA:1.20.120.80 15 200 2.0E-57 T 13-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001555 23563a48e68e34a453d0d9b980ae2419 200 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 21 200 1.4E-83 T 13-10-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 VEA_001555 23563a48e68e34a453d0d9b980ae2419 200 SUPERFAMILY SSF81452 7 198 9.81E-59 T 13-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001555 23563a48e68e34a453d0d9b980ae2419 200 Pfam PF00510 Cytochrome c oxidase subunit III 17 198 3.9E-16 T 13-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_003240 65d9d354c835652c3fef2741ab876c87 244 Pfam PF00691 OmpA family 101 222 1.2E-19 T 13-10-2018 IPR006665 OmpA-like domain VEA_003240 65d9d354c835652c3fef2741ab876c87 244 Gene3D G3DSA:3.30.1330.60 56 232 5.8E-21 T 13-10-2018 IPR036737 OmpA-like domain superfamily VEA_003240 65d9d354c835652c3fef2741ab876c87 244 SUPERFAMILY SSF103088 93 228 7.85E-9 T 13-10-2018 IPR036737 OmpA-like domain superfamily VEA_002954 41054bfc8c834370a88342e325e58f38 329 SMART SM00729 14 219 9.2E-5 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VEA_002954 41054bfc8c834370a88342e325e58f38 329 Pfam PF06463 Molybdenum Cofactor Synthesis C 186 312 2.2E-39 T 13-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VEA_002954 41054bfc8c834370a88342e325e58f38 329 Pfam PF13353 4Fe-4S single cluster domain 23 125 1.7E-8 T 13-10-2018 VEA_002954 41054bfc8c834370a88342e325e58f38 329 SUPERFAMILY SSF102114 6 289 3.14E-70 T 13-10-2018 VEA_002954 41054bfc8c834370a88342e325e58f38 329 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 6 329 2.6E-105 T 13-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VEA_002954 41054bfc8c834370a88342e325e58f38 329 Gene3D G3DSA:3.20.20.70 2 329 8.1E-83 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_002954 41054bfc8c834370a88342e325e58f38 329 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 5 329 36.84 T 13-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VEA_002954 41054bfc8c834370a88342e325e58f38 329 Pfam PF04055 Radical SAM superfamily 19 181 7.9E-27 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VEA_004299 99ca44add1014ea5c24fe49cbc86e4b9 147 Gene3D G3DSA:3.30.530.20 1 143 1.5E-37 T 13-10-2018 IPR023393 START-like domain superfamily VEA_004299 99ca44add1014ea5c24fe49cbc86e4b9 147 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 3.8E-31 T 13-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 VEA_004299 99ca44add1014ea5c24fe49cbc86e4b9 147 SUPERFAMILY SSF55961 1 143 4.66E-34 T 13-10-2018 VEA_003524 12d73d983424e6fd600bede6928e3c30 456 Pfam PF01554 MatE 243 404 4.7E-39 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEA_003524 12d73d983424e6fd600bede6928e3c30 456 Pfam PF01554 MatE 17 176 2.4E-36 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEA_003524 12d73d983424e6fd600bede6928e3c30 456 PIRSF PIRSF006603 5 452 8.0E-64 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEA_003524 12d73d983424e6fd600bede6928e3c30 456 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 421 5.0E-124 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEA_002892 06c0286e622e52ea22a182eb3f6b08d9 126 SUPERFAMILY SSF55298 1 125 2.51E-42 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VEA_002892 06c0286e622e52ea22a182eb3f6b08d9 126 Pfam PF01042 Endoribonuclease L-PSP 8 124 4.7E-38 T 13-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VEA_002892 06c0286e622e52ea22a182eb3f6b08d9 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 2 124 4.8E-47 T 13-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 VEA_002892 06c0286e622e52ea22a182eb3f6b08d9 126 Gene3D G3DSA:3.30.1330.40 1 126 3.6E-50 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VEA_000907 4c32b652d9599a6a3407293be0ef62e1 392 SUPERFAMILY SSF81296 26 217 6.58E-50 T 13-10-2018 IPR014756 Immunoglobulin E-set VEA_000907 4c32b652d9599a6a3407293be0ef62e1 392 Gene3D G3DSA:2.10.10.20 349 392 6.0E-18 T 13-10-2018 VEA_000907 4c32b652d9599a6a3407293be0ef62e1 392 Gene3D G3DSA:2.70.50.50 26 219 1.8E-64 T 13-10-2018 VEA_000907 4c32b652d9599a6a3407293be0ef62e1 392 SUPERFAMILY SSF51055 340 389 3.79E-13 T 13-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VEA_000907 4c32b652d9599a6a3407293be0ef62e1 392 SMART SM00495 349 392 3.1E-6 T 13-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VEA_000907 4c32b652d9599a6a3407293be0ef62e1 392 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 26 214 4.6E-37 T 13-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal VEA_004507 01bdfb08a6943bd2fd8a762ceac023e5 245 Pfam PF02167 Cytochrome C1 family 33 244 2.8E-16 T 13-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 VEA_004507 01bdfb08a6943bd2fd8a762ceac023e5 245 SUPERFAMILY SSF46626 16 208 1.58E-49 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEA_004507 01bdfb08a6943bd2fd8a762ceac023e5 245 Gene3D G3DSA:1.10.760.10 26 210 3.2E-17 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEA_001306 58b54c88cf2cf446539b969c9cfefe21 280 Gene3D G3DSA:1.10.10.60 177 227 4.9E-13 T 13-10-2018 VEA_001306 58b54c88cf2cf446539b969c9cfefe21 280 SUPERFAMILY SSF46689 181 227 3.76E-7 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_001306 58b54c88cf2cf446539b969c9cfefe21 280 Pfam PF12833 Helix-turn-helix domain 200 278 3.5E-19 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_001306 58b54c88cf2cf446539b969c9cfefe21 280 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 261 277 4.3E-6 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEA_001306 58b54c88cf2cf446539b969c9cfefe21 280 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 246 261 4.3E-6 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEA_001306 58b54c88cf2cf446539b969c9cfefe21 280 SUPERFAMILY SSF46689 230 279 4.93E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_001306 58b54c88cf2cf446539b969c9cfefe21 280 SUPERFAMILY SSF51182 26 78 6.02E-5 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily VEA_001306 58b54c88cf2cf446539b969c9cfefe21 280 Gene3D G3DSA:1.10.10.60 228 280 1.2E-16 T 13-10-2018 VEA_001306 58b54c88cf2cf446539b969c9cfefe21 280 SMART SM00342 194 277 1.7E-30 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_001306 58b54c88cf2cf446539b969c9cfefe21 280 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 231 273 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VEA_001922 ef6638944755cc3194429915fc1e1461 250 Pfam PF00902 Sec-independent protein translocase protein (TatC) 13 222 1.8E-67 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VEA_001922 ef6638944755cc3194429915fc1e1461 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 9 36 8.7E-52 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VEA_001922 ef6638944755cc3194429915fc1e1461 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 104 130 8.7E-52 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VEA_001922 ef6638944755cc3194429915fc1e1461 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 155 183 8.7E-52 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VEA_001922 ef6638944755cc3194429915fc1e1461 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 86 104 8.7E-52 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VEA_001922 ef6638944755cc3194429915fc1e1461 250 ProSitePatterns PS01218 TatC family signature. 155 174 - T 13-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site VEA_001922 ef6638944755cc3194429915fc1e1461 250 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 5 239 16.162 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VEA_001922 ef6638944755cc3194429915fc1e1461 250 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 10 227 3.8E-77 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VEA_004202 f7f9cd4ed8b55cdf634f37bd0edc0053 284 Gene3D G3DSA:3.40.50.150 91 282 1.9E-58 T 13-10-2018 VEA_004202 f7f9cd4ed8b55cdf634f37bd0edc0053 284 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 187 193 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VEA_004202 f7f9cd4ed8b55cdf634f37bd0edc0053 284 Pfam PF13847 Methyltransferase domain 117 247 1.0E-17 T 13-10-2018 IPR025714 Methyltransferase domain VEA_004202 f7f9cd4ed8b55cdf634f37bd0edc0053 284 SUPERFAMILY SSF53335 7 279 1.04E-57 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_004202 f7f9cd4ed8b55cdf634f37bd0edc0053 284 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 6 282 1.9E-81 T 13-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 VEA_004202 f7f9cd4ed8b55cdf634f37bd0edc0053 284 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 29 278 4.2E-94 T 13-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 VEA_004202 f7f9cd4ed8b55cdf634f37bd0edc0053 284 Gene3D G3DSA:1.10.8.10 6 90 2.4E-27 T 13-10-2018 VEA_004202 f7f9cd4ed8b55cdf634f37bd0edc0053 284 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 7 282 45.636 T 13-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 VEA_000794 4f1dbad545054c186f0ef8164ec3caa8 235 Gene3D G3DSA:3.40.50.720 3 235 1.2E-47 T 13-10-2018 VEA_000794 4f1dbad545054c186f0ef8164ec3caa8 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 196 216 3.0E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000794 4f1dbad545054c186f0ef8164ec3caa8 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 66 77 3.0E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000794 4f1dbad545054c186f0ef8164ec3caa8 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 3.0E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000794 4f1dbad545054c186f0ef8164ec3caa8 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 3.0E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000794 4f1dbad545054c186f0ef8164ec3caa8 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 3.0E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000794 4f1dbad545054c186f0ef8164ec3caa8 235 Pfam PF00106 short chain dehydrogenase 3 192 6.2E-22 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000794 4f1dbad545054c186f0ef8164ec3caa8 235 SUPERFAMILY SSF51735 3 235 1.3E-51 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_003722 1b00f8552bf55c37d7bbb1b8273aa025 565 PIRSF PIRSF001423 1 563 2.0E-294 T 13-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VEA_003722 1b00f8552bf55c37d7bbb1b8273aa025 565 SUPERFAMILY SSF111326 11 557 1.31E-259 T 13-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VEA_003722 1b00f8552bf55c37d7bbb1b8273aa025 565 Hamap MF_00577 Urocanate hydratase [hutU]. 2 558 49.28 T 13-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VEA_003722 1b00f8552bf55c37d7bbb1b8273aa025 565 Pfam PF17391 Urocanase N-terminal domain 17 143 1.0E-62 T 13-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VEA_003722 1b00f8552bf55c37d7bbb1b8273aa025 565 Gene3D G3DSA:3.40.1770.10 22 544 3.5E-258 T 13-10-2018 VEA_003722 1b00f8552bf55c37d7bbb1b8273aa025 565 TIGRFAM TIGR01228 hutU: urocanate hydratase 15 556 1.3E-290 T 13-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VEA_003722 1b00f8552bf55c37d7bbb1b8273aa025 565 Gene3D G3DSA:3.40.50.10730 147 351 3.5E-258 T 13-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VEA_003722 1b00f8552bf55c37d7bbb1b8273aa025 565 Pfam PF01175 Urocanase Rossmann-like domain 146 351 3.9E-84 T 13-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VEA_003722 1b00f8552bf55c37d7bbb1b8273aa025 565 Pfam PF17392 Urocanase C-terminal domain 354 548 1.9E-91 T 13-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VEA_003722 1b00f8552bf55c37d7bbb1b8273aa025 565 ProSitePatterns PS01233 Urocanase signature. 444 459 - T 13-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VEA_000946 4cdfa52b4e563331a8dbb4b06d481f1a 285 Pfam PF12146 Serine aminopeptidase, S33 83 183 2.9E-12 T 13-10-2018 IPR022742 Serine aminopeptidase, S33 VEA_000946 4cdfa52b4e563331a8dbb4b06d481f1a 285 Gene3D G3DSA:3.40.50.1820 71 276 3.4E-29 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_000946 4cdfa52b4e563331a8dbb4b06d481f1a 285 Pfam PF08386 TAP-like protein 216 268 2.0E-4 T 13-10-2018 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal VEA_000946 4cdfa52b4e563331a8dbb4b06d481f1a 285 SUPERFAMILY SSF53474 40 267 1.15E-30 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_003728 db529d541f6c87a71d3f0c09b7bfb030 231 PIRSF PIRSF028111 1 229 1.3E-84 T 13-10-2018 IPR016868 Bacteriophage B3, Orf5 VEA_003728 db529d541f6c87a71d3f0c09b7bfb030 231 Pfam PF10979 Protein of unknown function (DUF2786) 5 42 2.8E-12 T 13-10-2018 IPR024498 Domain of unknown function DUF2786 VEA_000833 f8bc0064c67cdf6dbeacca84ce9937db 289 SUPERFAMILY SSF53807 26 260 4.76E-19 T 13-10-2018 VEA_000833 f8bc0064c67cdf6dbeacca84ce9937db 289 Gene3D G3DSA:3.40.50.1980 69 188 3.3E-7 T 13-10-2018 VEA_003082 c70314da72f34ba6b35076499ade1a38 231 SMART SM00100 13 131 1.2E-7 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain VEA_003082 c70314da72f34ba6b35076499ade1a38 231 Pfam PF13545 Crp-like helix-turn-helix domain 151 224 4.8E-15 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VEA_003082 c70314da72f34ba6b35076499ade1a38 231 SUPERFAMILY SSF46785 149 226 4.49E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_003082 c70314da72f34ba6b35076499ade1a38 231 Gene3D G3DSA:2.60.120.10 3 153 3.7E-25 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VEA_003082 c70314da72f34ba6b35076499ade1a38 231 SMART SM00419 170 218 0.0054 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VEA_003082 c70314da72f34ba6b35076499ade1a38 231 Pfam PF00027 Cyclic nucleotide-binding domain 34 119 1.5E-13 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain VEA_003082 c70314da72f34ba6b35076499ade1a38 231 SUPERFAMILY SSF51206 1 142 1.7E-26 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like VEA_003082 c70314da72f34ba6b35076499ade1a38 231 Gene3D G3DSA:1.10.10.10 154 229 1.3E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000092 98c3791fa23d0cd374e276fba7984c96 442 PIRSF PIRSF002808 1 439 1.9E-106 T 13-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 VEA_000092 98c3791fa23d0cd374e276fba7984c96 442 SUPERFAMILY SSF103473 6 423 2.49E-56 T 13-10-2018 IPR036259 MFS transporter superfamily VEA_000092 98c3791fa23d0cd374e276fba7984c96 442 Gene3D G3DSA:1.20.1250.20 7 208 5.5E-34 T 13-10-2018 VEA_000092 98c3791fa23d0cd374e276fba7984c96 442 Pfam PF07690 Major Facilitator Superfamily 13 374 5.2E-34 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEA_000092 98c3791fa23d0cd374e276fba7984c96 442 Gene3D G3DSA:1.20.1250.20 224 437 1.9E-37 T 13-10-2018 VEA_000092 98c3791fa23d0cd374e276fba7984c96 442 ProSitePatterns PS00942 glpT family of transporters signature. 134 150 - T 13-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 VEA_000092 98c3791fa23d0cd374e276fba7984c96 442 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 14 404 3.3E-139 T 13-10-2018 VEA_002542 bcb82d3a38aa48e32d6b6b66d27f25ec 204 SUPERFAMILY SSF52540 1 193 6.98E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002542 bcb82d3a38aa48e32d6b6b66d27f25ec 204 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 197 28.034 T 13-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 VEA_002542 bcb82d3a38aa48e32d6b6b66d27f25ec 204 Gene3D G3DSA:3.40.50.300 1 204 3.1E-70 T 13-10-2018 VEA_002542 bcb82d3a38aa48e32d6b6b66d27f25ec 204 Pfam PF01121 Dephospho-CoA kinase 3 179 1.0E-72 T 13-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 VEA_002542 bcb82d3a38aa48e32d6b6b66d27f25ec 204 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 180 1.1E-67 T 13-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 VEA_003679 1425aed556efbe61b11eb49d490d72d4 375 Pfam PF05971 Protein of unknown function (DUF890) 55 364 2.9E-131 T 13-10-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 VEA_003679 1425aed556efbe61b11eb49d490d72d4 375 Gene3D G3DSA:3.40.50.150 89 364 2.2E-79 T 13-10-2018 VEA_003679 1425aed556efbe61b11eb49d490d72d4 375 PIRSF PIRSF029038 45 375 1.2E-160 T 13-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 VEA_003679 1425aed556efbe61b11eb49d490d72d4 375 SUPERFAMILY SSF53335 94 364 7.74E-35 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_003679 1425aed556efbe61b11eb49d490d72d4 375 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 56 366 54.036 T 13-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 VEA_000724 121de36a637e5a460c20780766c12816 116 SMART SM00450 25 116 2.0E-20 T 13-10-2018 IPR001763 Rhodanese-like domain VEA_000724 121de36a637e5a460c20780766c12816 116 SUPERFAMILY SSF52821 27 111 8.91E-26 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily VEA_000724 121de36a637e5a460c20780766c12816 116 Pfam PF00581 Rhodanese-like domain 28 113 1.2E-15 T 13-10-2018 IPR001763 Rhodanese-like domain VEA_000724 121de36a637e5a460c20780766c12816 116 Gene3D G3DSA:3.40.250.10 24 116 6.1E-26 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily VEA_004481 39e7602912c490ddde2f408cb41b7829 269 Gene3D G3DSA:3.30.360.10 127 234 1.6E-100 T 13-10-2018 VEA_004481 39e7602912c490ddde2f408cb41b7829 269 Gene3D G3DSA:3.40.50.720 3 264 1.6E-100 T 13-10-2018 VEA_004481 39e7602912c490ddde2f408cb41b7829 269 SUPERFAMILY SSF55347 127 236 1.02E-37 T 13-10-2018 VEA_004481 39e7602912c490ddde2f408cb41b7829 269 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 265 6.4E-98 T 13-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VEA_004481 39e7602912c490ddde2f408cb41b7829 269 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 150 167 - T 13-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VEA_004481 39e7602912c490ddde2f408cb41b7829 269 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 125 5.4E-39 T 13-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VEA_004481 39e7602912c490ddde2f408cb41b7829 269 SUPERFAMILY SSF51735 1 268 4.15E-50 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_004481 39e7602912c490ddde2f408cb41b7829 269 PIRSF PIRSF000161 1 268 1.0E-87 T 13-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VEA_004481 39e7602912c490ddde2f408cb41b7829 269 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 128 264 1.0E-43 T 13-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VEA_004481 39e7602912c490ddde2f408cb41b7829 269 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 265 35.394 T 13-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VEA_004403 37d93fde1789c9eefc35468ce55ba01e 122 Gene3D G3DSA:2.40.10.220 1 120 3.9E-29 T 13-10-2018 VEA_004403 37d93fde1789c9eefc35468ce55ba01e 122 SUPERFAMILY SSF141371 1 120 2.35E-29 T 13-10-2018 VEA_004403 37d93fde1789c9eefc35468ce55ba01e 122 Pfam PF07238 PilZ domain 3 100 1.8E-13 T 13-10-2018 IPR009875 PilZ domain GO:0035438 VEA_004403 37d93fde1789c9eefc35468ce55ba01e 122 PIRSF PIRSF028141 1 120 3.2E-35 T 13-10-2018 IPR027021 Cyclic di-GMP binding protein, PA4608 type VEA_002830 4746d685b6f7d50ace05501cb0162e81 505 SMART SM00382 291 444 7.0E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_002830 4746d685b6f7d50ace05501cb0162e81 505 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 146 380 5.5E-70 T 13-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 VEA_002830 4746d685b6f7d50ace05501cb0162e81 505 Gene3D G3DSA:1.20.120.1380 266 476 2.9E-57 T 13-10-2018 VEA_002830 4746d685b6f7d50ace05501cb0162e81 505 Pfam PF00448 SRP54-type protein, GTPase domain 294 481 5.2E-38 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VEA_002830 4746d685b6f7d50ace05501cb0162e81 505 SUPERFAMILY SSF52540 288 479 2.18E-33 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002830 4746d685b6f7d50ace05501cb0162e81 505 SMART SM00962 292 485 2.9E-63 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VEA_002830 4746d685b6f7d50ace05501cb0162e81 505 Gene3D G3DSA:3.40.50.300 287 473 2.9E-57 T 13-10-2018 VEA_000773 3e5a54c8af651c628509c57c85d27f85 418 Pfam PF03611 PTS system sugar-specific permease component 11 405 1.3E-144 T 13-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 VEA_004490 5e1ba94e8159f927c4ef57fc79b6ff69 355 Gene3D G3DSA:3.40.50.2000 161 318 6.7E-122 T 13-10-2018 VEA_004490 5e1ba94e8159f927c4ef57fc79b6ff69 355 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 348 2.3E-118 T 13-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEA_004490 5e1ba94e8159f927c4ef57fc79b6ff69 355 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 7 352 34.843 T 13-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEA_004490 5e1ba94e8159f927c4ef57fc79b6ff69 355 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 184 332 2.0E-35 T 13-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 VEA_004490 5e1ba94e8159f927c4ef57fc79b6ff69 355 Gene3D G3DSA:3.40.50.2000 8 160 6.7E-122 T 13-10-2018 VEA_004490 5e1ba94e8159f927c4ef57fc79b6ff69 355 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 8 144 2.7E-47 T 13-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEA_004490 5e1ba94e8159f927c4ef57fc79b6ff69 355 SUPERFAMILY SSF53756 5 352 2.79E-126 T 13-10-2018 VEA_001165 80d65eacea0e8ccc6404d2d266f54f84 330 SUPERFAMILY SSF103088 154 274 1.57E-19 T 13-10-2018 IPR036737 OmpA-like domain superfamily VEA_001165 80d65eacea0e8ccc6404d2d266f54f84 330 Pfam PF00691 OmpA family 170 266 3.9E-12 T 13-10-2018 IPR006665 OmpA-like domain VEA_001165 80d65eacea0e8ccc6404d2d266f54f84 330 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 11 62 2.5E-17 T 13-10-2018 IPR025713 Motility protein B, N-terminal domain VEA_001165 80d65eacea0e8ccc6404d2d266f54f84 330 Gene3D G3DSA:3.30.1330.60 123 305 3.1E-42 T 13-10-2018 IPR036737 OmpA-like domain superfamily VEA_003756 d61cd66e2fb9cc478e5fb1c14578c64e 301 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 134 299 1.0E-77 T 13-10-2018 IPR005642 Lysine exporter LysO VEA_003756 d61cd66e2fb9cc478e5fb1c14578c64e 301 Pfam PF03956 Lysine exporter LysO 112 297 1.2E-52 T 13-10-2018 IPR005642 Lysine exporter LysO VEA_000972 67201835fa7e2ea9f253fdc4fa0417aa 161 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 33 50 - T 13-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 VEA_000972 67201835fa7e2ea9f253fdc4fa0417aa 161 Gene3D G3DSA:2.40.100.10 1 160 3.6E-62 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily VEA_000972 67201835fa7e2ea9f253fdc4fa0417aa 161 SUPERFAMILY SSF50891 1 159 2.48E-56 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily VEA_000972 67201835fa7e2ea9f253fdc4fa0417aa 161 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 38 50 5.3E-10 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VEA_000972 67201835fa7e2ea9f253fdc4fa0417aa 161 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 12 27 5.3E-10 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VEA_000972 67201835fa7e2ea9f253fdc4fa0417aa 161 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 115 130 5.3E-10 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VEA_000972 67201835fa7e2ea9f253fdc4fa0417aa 161 PIRSF PIRSF001467 1 161 1.2E-25 T 13-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 VEA_000972 67201835fa7e2ea9f253fdc4fa0417aa 161 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 158 1.4E-45 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VEA_002202 55fdb0233a4adfa9a1d2660dac7fc28e 395 Pfam PF12832 MFS_1 like family 13 361 1.6E-38 T 13-10-2018 IPR024989 Major facilitator superfamily associated domain VEA_002202 55fdb0233a4adfa9a1d2660dac7fc28e 395 Gene3D G3DSA:1.20.1250.20 2 186 1.3E-17 T 13-10-2018 VEA_002202 55fdb0233a4adfa9a1d2660dac7fc28e 395 PIRSF PIRSF004925 1 387 9.6E-103 T 13-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter VEA_002202 55fdb0233a4adfa9a1d2660dac7fc28e 395 Gene3D G3DSA:1.20.1250.20 195 384 1.1E-31 T 13-10-2018 VEA_002202 55fdb0233a4adfa9a1d2660dac7fc28e 395 SUPERFAMILY SSF103473 8 373 4.58E-35 T 13-10-2018 IPR036259 MFS transporter superfamily VEA_003362 92aec7af3383600929b50355a563740c 216 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 192 204 - T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VEA_003362 92aec7af3383600929b50355a563740c 216 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 144 159 - T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VEA_003362 92aec7af3383600929b50355a563740c 216 Pfam PF00813 FliP family 14 211 2.3E-68 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VEA_003362 92aec7af3383600929b50355a563740c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 165 186 7.8E-71 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VEA_003362 92aec7af3383600929b50355a563740c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 189 214 7.8E-71 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VEA_003362 92aec7af3383600929b50355a563740c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 50 69 7.8E-71 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VEA_003362 92aec7af3383600929b50355a563740c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 30 50 7.8E-71 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VEA_003362 92aec7af3383600929b50355a563740c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 144 164 7.8E-71 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VEA_003362 92aec7af3383600929b50355a563740c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 11 30 7.8E-71 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VEA_003362 92aec7af3383600929b50355a563740c 216 TIGRFAM TIGR01102 yscR: type III secretion apparatus protein, YscR/HrcR family 10 211 8.3E-92 T 13-10-2018 IPR005773 Yop virulence translocation protein R GO:0015031|GO:0016021 VEA_001783 79d20fbfa08dc4a619ea89223d98034e 217 Pfam PF00005 ABC transporter 21 150 6.8E-14 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_001783 79d20fbfa08dc4a619ea89223d98034e 217 Gene3D G3DSA:3.40.50.300 1 214 5.2E-34 T 13-10-2018 VEA_001783 79d20fbfa08dc4a619ea89223d98034e 217 SUPERFAMILY SSF52540 2 211 3.12E-36 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001783 79d20fbfa08dc4a619ea89223d98034e 217 ProSitePatterns PS00211 ABC transporters family signature. 123 137 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_001783 79d20fbfa08dc4a619ea89223d98034e 217 SMART SM00382 30 194 2.4E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_001411 2d9a38ae53a49295fd1406b5cf1e5030 585 Gene3D G3DSA:3.40.190.10 122 352 8.3E-33 T 13-10-2018 VEA_001411 2d9a38ae53a49295fd1406b5cf1e5030 585 SUPERFAMILY SSF53850 116 583 1.27E-64 T 13-10-2018 VEA_001411 2d9a38ae53a49295fd1406b5cf1e5030 585 Pfam PF12793 Sugar transport-related sRNA regulator N-term 6 119 1.7E-32 T 13-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain VEA_001411 2d9a38ae53a49295fd1406b5cf1e5030 585 PIRSF PIRSF002741 417 583 4.1E-4 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VEA_001411 2d9a38ae53a49295fd1406b5cf1e5030 585 PIRSF PIRSF002741 90 324 1.1E-30 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VEA_001411 2d9a38ae53a49295fd1406b5cf1e5030 585 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 163 312 4.1E-22 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain VEA_004186 53da6d74d3cf679ad84df29d0d65a1cf 373 Pfam PF13609 Gram-negative porin 10 342 4.4E-34 T 13-10-2018 VEA_004186 53da6d74d3cf679ad84df29d0d65a1cf 373 Gene3D G3DSA:2.40.160.10 44 373 8.7E-43 T 13-10-2018 IPR023614 Porin domain superfamily VEA_004186 53da6d74d3cf679ad84df29d0d65a1cf 373 SUPERFAMILY SSF56935 44 373 2.08E-40 T 13-10-2018 VEA_000798 363a7f32fb76474ec95a25a0ff9cae70 192 Gene3D G3DSA:2.170.170.11 18 134 1.3E-28 T 13-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VEA_000798 363a7f32fb76474ec95a25a0ff9cae70 192 SUPERFAMILY SSF51645 20 187 1.18E-24 T 13-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VEA_001062 6cb1f9dfbd88ba8f6c493f867bdaa0d5 400 SUPERFAMILY SSF51419 32 285 1.28E-62 T 13-10-2018 IPR029066 PLP-binding barrel VEA_001062 6cb1f9dfbd88ba8f6c493f867bdaa0d5 400 SUPERFAMILY SSF50621 246 398 4.19E-34 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VEA_001062 6cb1f9dfbd88ba8f6c493f867bdaa0d5 400 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 35 282 4.0E-31 T 13-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 VEA_001062 6cb1f9dfbd88ba8f6c493f867bdaa0d5 400 Gene3D G3DSA:2.40.37.10 264 399 3.5E-40 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VEA_001062 6cb1f9dfbd88ba8f6c493f867bdaa0d5 400 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 187 200 3.0E-8 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VEA_001062 6cb1f9dfbd88ba8f6c493f867bdaa0d5 400 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 3.0E-8 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VEA_001062 6cb1f9dfbd88ba8f6c493f867bdaa0d5 400 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 75 87 3.0E-8 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VEA_001062 6cb1f9dfbd88ba8f6c493f867bdaa0d5 400 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 55 73 3.0E-8 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VEA_001062 6cb1f9dfbd88ba8f6c493f867bdaa0d5 400 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 29 378 3.4E-14 T 13-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 VEA_001062 6cb1f9dfbd88ba8f6c493f867bdaa0d5 400 Gene3D G3DSA:3.20.20.10 34 263 1.6E-46 T 13-10-2018 IPR029066 PLP-binding barrel VEA_001009 edeab3dac10408d6f4cc0786ddb3881a 627 Pfam PF00563 EAL domain 401 625 6.6E-40 T 13-10-2018 IPR001633 EAL domain VEA_001009 edeab3dac10408d6f4cc0786ddb3881a 627 SUPERFAMILY SSF141868 401 626 1.57E-40 T 13-10-2018 IPR035919 EAL domain superfamily VEA_001009 edeab3dac10408d6f4cc0786ddb3881a 627 Gene3D G3DSA:3.30.1040.50 92 141 5.8E-18 T 13-10-2018 VEA_001009 edeab3dac10408d6f4cc0786ddb3881a 627 Gene3D G3DSA:3.20.20.450 391 626 1.4E-40 T 13-10-2018 IPR035919 EAL domain superfamily VEA_001009 edeab3dac10408d6f4cc0786ddb3881a 627 Pfam PF16448 LapD/MoxY periplasmic domain 13 136 7.7E-40 T 13-10-2018 IPR032244 LapD/MoxY, periplasmic domain VEA_001009 edeab3dac10408d6f4cc0786ddb3881a 627 Gene3D G3DSA:3.30.70.270 213 382 2.3E-20 T 13-10-2018 VEA_001009 edeab3dac10408d6f4cc0786ddb3881a 627 SMART SM00267 216 382 3.8E-12 T 13-10-2018 IPR000160 GGDEF domain VEA_001009 edeab3dac10408d6f4cc0786ddb3881a 627 SMART SM00052 393 625 1.8E-10 T 13-10-2018 IPR001633 EAL domain VEA_001009 edeab3dac10408d6f4cc0786ddb3881a 627 SUPERFAMILY SSF55073 233 382 3.3E-17 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_001009 edeab3dac10408d6f4cc0786ddb3881a 627 Pfam PF00990 Diguanylate cyclase, GGDEF domain 227 376 9.2E-13 T 13-10-2018 IPR000160 GGDEF domain VEA_001087 3ff88182a4862aaa47e16a5b6900c2e8 537 Gene3D G3DSA:2.60.40.1180 451 534 9.9E-7 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta VEA_001087 3ff88182a4862aaa47e16a5b6900c2e8 537 SUPERFAMILY SSF51011 457 535 3.74E-8 T 13-10-2018 VEA_001087 3ff88182a4862aaa47e16a5b6900c2e8 537 Gene3D G3DSA:3.20.20.80 52 183 3.3E-38 T 13-10-2018 VEA_001087 3ff88182a4862aaa47e16a5b6900c2e8 537 Gene3D G3DSA:3.20.20.80 194 417 1.1E-30 T 13-10-2018 VEA_001087 3ff88182a4862aaa47e16a5b6900c2e8 537 SMART SM00642 62 448 7.2E-35 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VEA_001087 3ff88182a4862aaa47e16a5b6900c2e8 537 Pfam PF00128 Alpha amylase, catalytic domain 206 391 2.6E-14 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VEA_001087 3ff88182a4862aaa47e16a5b6900c2e8 537 Pfam PF00128 Alpha amylase, catalytic domain 88 175 9.3E-27 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VEA_001087 3ff88182a4862aaa47e16a5b6900c2e8 537 SUPERFAMILY SSF51445 56 458 4.86E-68 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VEA_002823 c8fe6d6e20311c40956d715f2fb9e1d3 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 73 89 5.6E-28 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VEA_002823 c8fe6d6e20311c40956d715f2fb9e1d3 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 89 102 5.6E-28 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VEA_002823 c8fe6d6e20311c40956d715f2fb9e1d3 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 102 117 5.6E-28 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VEA_002823 c8fe6d6e20311c40956d715f2fb9e1d3 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 56 72 5.6E-28 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VEA_002823 c8fe6d6e20311c40956d715f2fb9e1d3 136 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 54 128 1.5E-33 T 13-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 VEA_002823 c8fe6d6e20311c40956d715f2fb9e1d3 136 Gene3D G3DSA:2.30.330.10 43 136 2.8E-34 T 13-10-2018 IPR036429 SpoA-like superfamily VEA_002823 c8fe6d6e20311c40956d715f2fb9e1d3 136 SUPERFAMILY SSF101801 54 134 7.32E-25 T 13-10-2018 IPR036429 SpoA-like superfamily VEA_002823 c8fe6d6e20311c40956d715f2fb9e1d3 136 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 56 126 6.6E-25 T 13-10-2018 IPR001543 Surface presentation of antigen (SpoA) VEA_000289 8897570771c0d8015dfb15e2a90158d4 681 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 308 410 5.2E-17 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_000289 8897570771c0d8015dfb15e2a90158d4 681 SUPERFAMILY SSF47384 171 220 4.12E-5 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEA_000289 8897570771c0d8015dfb15e2a90158d4 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 410 1.2E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_000289 8897570771c0d8015dfb15e2a90158d4 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 391 1.2E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_000289 8897570771c0d8015dfb15e2a90158d4 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 343 357 1.2E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_000289 8897570771c0d8015dfb15e2a90158d4 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 361 371 1.2E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_000289 8897570771c0d8015dfb15e2a90158d4 681 SMART SM00387 305 413 5.6E-22 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_000289 8897570771c0d8015dfb15e2a90158d4 681 Gene3D G3DSA:3.30.565.10 259 411 2.5E-29 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_000289 8897570771c0d8015dfb15e2a90158d4 681 Gene3D G3DSA:3.40.50.2300 556 681 4.2E-36 T 13-10-2018 VEA_000289 8897570771c0d8015dfb15e2a90158d4 681 SMART SM00448 563 677 5.0E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_000289 8897570771c0d8015dfb15e2a90158d4 681 SUPERFAMILY SSF55874 250 413 2.36E-31 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_000289 8897570771c0d8015dfb15e2a90158d4 681 Pfam PF00072 Response regulator receiver domain 565 677 1.5E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_000289 8897570771c0d8015dfb15e2a90158d4 681 Gene3D G3DSA:1.10.287.130 168 258 1.1E-5 T 13-10-2018 VEA_000289 8897570771c0d8015dfb15e2a90158d4 681 SUPERFAMILY SSF52172 561 681 4.98E-35 T 13-10-2018 IPR011006 CheY-like superfamily VEA_003219 a501b5f37426e00a7141fe59c063713a 165 Gene3D G3DSA:3.40.50.300 1 164 6.8E-16 T 13-10-2018 VEA_003219 a501b5f37426e00a7141fe59c063713a 165 SUPERFAMILY SSF52540 2 115 2.94E-16 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003078 7428e16abf0a863e374a648e6049d9f2 394 ProDom PD097636 LACTONE SYNTHASE HOMOSERINE VANM AUTOINDUCER SYNTHESIS LUXL 12 156 5.0E-40 T 13-10-2018 IPR020374 Homoserine lactone synthase LuxM/VanM, N-terminal GO:0016747 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 VEA_003078 7428e16abf0a863e374a648e6049d9f2 394 ProDom PD037532 SYNTHASE LACTONE HOMOSERINE AUTOINDUCER N-OCTANOYL VANM AINS LUXM SYNTHESIS 183 385 2.0E-71 T 13-10-2018 IPR020384 Homoserine lactone synthase LuxM/VanM, C-terminal GO:0016747 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 VEA_003078 7428e16abf0a863e374a648e6049d9f2 394 Pfam PF17327 Acyl homoserine lactone synthase 18 388 1.5E-133 T 13-10-2018 IPR035304 Acyl homoserine lactone synthase GO:0009372|GO:0061579 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 VEA_004375 704881700b269ed06593ac37100951e6 249 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 5 209 30.27 T 13-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 VEA_004375 704881700b269ed06593ac37100951e6 249 Pfam PF03932 CutC family 6 207 2.5E-81 T 13-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 VEA_004375 704881700b269ed06593ac37100951e6 249 Gene3D G3DSA:3.20.20.380 5 249 1.0E-85 T 13-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 VEA_004375 704881700b269ed06593ac37100951e6 249 SUPERFAMILY SSF110395 6 249 4.84E-73 T 13-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 VEA_000593 186816277ae30ec9e38bd59883cce2a6 157 SUPERFAMILY SSF52833 1 156 1.78E-34 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VEA_000593 186816277ae30ec9e38bd59883cce2a6 157 Gene3D G3DSA:3.40.30.10 2 157 9.7E-60 T 13-10-2018 VEA_000593 186816277ae30ec9e38bd59883cce2a6 157 Pfam PF08534 Redoxin 4 154 3.7E-38 T 13-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 VEA_003586 6f600f5c68ca9f969f82efd2652a8f61 472 Pfam PF00939 Sodium:sulfate symporter transmembrane region 5 462 2.3E-50 T 13-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VEA_003586 6f600f5c68ca9f969f82efd2652a8f61 472 PIRSF PIRSF002457 1 472 1.2E-120 T 13-10-2018 IPR030676 Citrate carrier CitT-related VEA_003586 6f600f5c68ca9f969f82efd2652a8f61 472 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 35 462 1.4E-78 T 13-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VEA_004221 cd22f5a30f83b1f3be73514684b17f05 145 Gene3D G3DSA:3.40.1280.10 1 145 1.7E-48 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VEA_004221 cd22f5a30f83b1f3be73514684b17f05 145 PIRSF PIRSF004505 1 144 3.1E-40 T 13-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 VEA_004221 cd22f5a30f83b1f3be73514684b17f05 145 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 144 22.911 T 13-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 VEA_004221 cd22f5a30f83b1f3be73514684b17f05 145 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 145 1.4E-72 T 13-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 VEA_004221 cd22f5a30f83b1f3be73514684b17f05 145 Pfam PF02590 Predicted SPOUT methyltransferase 2 143 2.8E-44 T 13-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 VEA_004221 cd22f5a30f83b1f3be73514684b17f05 145 SUPERFAMILY SSF75217 1 143 9.94E-47 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases VEA_004428 b4014c00da50fa0da35fe71dce504492 273 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 5 262 2.6E-90 T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 VEA_004428 b4014c00da50fa0da35fe71dce504492 273 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 257 6.5E-83 T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 VEA_004428 b4014c00da50fa0da35fe71dce504492 273 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 262 20.097 T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 VEA_004428 b4014c00da50fa0da35fe71dce504492 273 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 VEA_003499 737de206bd328ba21922455e7b622778 154 Pfam PF11749 Protein of unknown function (DUF3305) 58 144 2.2E-19 T 13-10-2018 IPR021736 Protein of unknown function DUF3305 VEA_003653 6db1430cff420882befa700e6eb5fa3f 345 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 88 339 2.5E-39 T 13-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 VEA_003653 6db1430cff420882befa700e6eb5fa3f 345 Gene3D G3DSA:3.90.850.10 1 345 2.1E-134 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VEA_003653 6db1430cff420882befa700e6eb5fa3f 345 SUPERFAMILY SSF56529 83 339 7.33E-56 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VEA_003580 ca745939147010d7ac7d51bb59322b5d 514 PIRSF PIRSF028991 4 513 5.5E-284 T 13-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted VEA_003580 ca745939147010d7ac7d51bb59322b5d 514 Pfam PF11230 Protein of unknown function (DUF3029) 20 501 1.1E-225 T 13-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted VEA_003580 ca745939147010d7ac7d51bb59322b5d 514 TIGRFAM TIGR04040 glycyl_YjjI: glycine radical enzyme, YjjI family 10 501 1.2E-228 T 13-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted VEA_003580 ca745939147010d7ac7d51bb59322b5d 514 SUPERFAMILY SSF51998 24 466 1.5E-95 T 13-10-2018 VEA_000411 249caffcc9798c9b882c4b44c6c44fa9 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 75 91 3.4E-35 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VEA_000411 249caffcc9798c9b882c4b44c6c44fa9 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 110 130 3.4E-35 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VEA_000411 249caffcc9798c9b882c4b44c6c44fa9 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 139 156 3.4E-35 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VEA_000411 249caffcc9798c9b882c4b44c6c44fa9 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 192 204 3.4E-35 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VEA_000411 249caffcc9798c9b882c4b44c6c44fa9 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 96 109 3.4E-35 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VEA_000411 249caffcc9798c9b882c4b44c6c44fa9 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 5 20 3.4E-35 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VEA_000411 249caffcc9798c9b882c4b44c6c44fa9 442 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 196 416 2.8E-44 T 13-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 VEA_000411 249caffcc9798c9b882c4b44c6c44fa9 442 Pfam PF02056 Family 4 glycosyl hydrolase 5 185 4.9E-46 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VEA_000411 249caffcc9798c9b882c4b44c6c44fa9 442 SUPERFAMILY SSF56327 170 441 1.19E-68 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VEA_000411 249caffcc9798c9b882c4b44c6c44fa9 442 SUPERFAMILY SSF51735 3 164 1.22E-46 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_000411 249caffcc9798c9b882c4b44c6c44fa9 442 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 139 171 - T 13-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 VEA_000411 249caffcc9798c9b882c4b44c6c44fa9 442 Gene3D G3DSA:3.40.50.720 1 167 2.9E-50 T 13-10-2018 VEA_000411 249caffcc9798c9b882c4b44c6c44fa9 442 Gene3D G3DSA:3.90.110.10 170 442 1.4E-84 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VEA_004474 b82483194ad99dec0cb6d606d5ec33be 206 Pfam PF03458 UPF0126 domain 95 166 4.0E-19 T 13-10-2018 IPR005115 Uncharacterised domain UPF0126 VEA_004474 b82483194ad99dec0cb6d606d5ec33be 206 Pfam PF03458 UPF0126 domain 8 81 5.3E-22 T 13-10-2018 IPR005115 Uncharacterised domain UPF0126 VEA_002807 b9c657bcf3c1d9ebc1518dd5889b6b61 144 SUPERFAMILY SSF160214 62 140 5.36E-22 T 13-10-2018 IPR035924 FlaG-like superfamily VEA_002807 b9c657bcf3c1d9ebc1518dd5889b6b61 144 Gene3D G3DSA:3.30.160.170 36 136 4.6E-13 T 13-10-2018 IPR035924 FlaG-like superfamily VEA_002807 b9c657bcf3c1d9ebc1518dd5889b6b61 144 Pfam PF03646 FlaG protein 44 142 1.8E-24 T 13-10-2018 IPR005186 FlaG protein VEA_001615 d242541103d635f999810be29243cd25 267 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 257 2.3E-74 T 13-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 VEA_001615 d242541103d635f999810be29243cd25 267 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 17.588 T 13-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 VEA_001615 d242541103d635f999810be29243cd25 267 Pfam PF02673 Bacitracin resistance protein BacA 6 258 1.9E-82 T 13-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 VEA_002557 6377519b61735fcdd8e3a524f868d768 305 Pfam PF00005 ABC transporter 20 164 1.8E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_002557 6377519b61735fcdd8e3a524f868d768 305 Gene3D G3DSA:3.40.50.300 1 237 3.1E-65 T 13-10-2018 VEA_002557 6377519b61735fcdd8e3a524f868d768 305 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_002557 6377519b61735fcdd8e3a524f868d768 305 SUPERFAMILY SSF52540 3 230 1.46E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002557 6377519b61735fcdd8e3a524f868d768 305 SMART SM00382 29 213 2.4E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_003110 abaa1936272ba893e9cd52571a0d4908 242 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 18 242 36.924 T 13-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 VEA_003110 abaa1936272ba893e9cd52571a0d4908 242 SUPERFAMILY SSF53335 22 239 1.37E-44 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_003110 abaa1936272ba893e9cd52571a0d4908 242 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 18 236 1.8E-85 T 13-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 VEA_003110 abaa1936272ba893e9cd52571a0d4908 242 Gene3D G3DSA:3.40.50.150 18 242 1.0E-74 T 13-10-2018 VEA_003110 abaa1936272ba893e9cd52571a0d4908 242 Pfam PF13489 Methyltransferase domain 59 208 2.8E-24 T 13-10-2018 VEA_003409 c8527b87db6ae15a66fc859f328ddd03 467 Gene3D G3DSA:1.10.287.950 139 466 2.7E-63 T 13-10-2018 VEA_003409 c8527b87db6ae15a66fc859f328ddd03 467 SUPERFAMILY SSF58104 157 466 1.7E-66 T 13-10-2018 VEA_003409 c8527b87db6ae15a66fc859f328ddd03 467 SMART SM00283 205 466 2.4E-59 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_003409 c8527b87db6ae15a66fc859f328ddd03 467 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 252 431 5.2E-38 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VEA_000238 78754dd7665703e8985a3d337280bfd0 164 Pfam PF14317 YcxB-like protein 99 154 4.1E-6 T 13-10-2018 IPR025588 YcxB-like protein VEA_001724 43ecbee32af215b0bd10414e148ba336 58 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 2.1E-21 T 13-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain VEA_001724 43ecbee32af215b0bd10414e148ba336 58 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 3.1E-27 T 13-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001724 43ecbee32af215b0bd10414e148ba336 58 PIRSF PIRSF002211 1 58 6.5E-29 T 13-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001724 43ecbee32af215b0bd10414e148ba336 58 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 22.083 T 13-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001724 43ecbee32af215b0bd10414e148ba336 58 Gene3D G3DSA:3.30.1390.20 1 58 2.9E-28 T 13-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily VEA_001724 43ecbee32af215b0bd10414e148ba336 58 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 13-10-2018 IPR018038 Ribosomal protein L30, conserved site VEA_001724 43ecbee32af215b0bd10414e148ba336 58 SUPERFAMILY SSF55129 1 58 2.22E-23 T 13-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily VEA_000925 1fd6ee4d63f5fd2479bd2dd729c82569 622 Gene3D G3DSA:2.60.120.10 5 142 3.0E-11 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VEA_000925 1fd6ee4d63f5fd2479bd2dd729c82569 622 Pfam PF03445 Putative nucleotidyltransferase DUF294 303 436 4.1E-46 T 13-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 VEA_000925 1fd6ee4d63f5fd2479bd2dd729c82569 622 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 475 618 7.7E-45 T 13-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding VEA_000925 1fd6ee4d63f5fd2479bd2dd729c82569 622 SUPERFAMILY SSF54631 157 274 1.17E-25 T 13-10-2018 VEA_000925 1fd6ee4d63f5fd2479bd2dd729c82569 622 SMART SM00116 230 277 6.3E-7 T 13-10-2018 IPR000644 CBS domain VEA_000925 1fd6ee4d63f5fd2479bd2dd729c82569 622 SMART SM00116 165 213 5.5 T 13-10-2018 IPR000644 CBS domain VEA_000925 1fd6ee4d63f5fd2479bd2dd729c82569 622 SUPERFAMILY SSF51206 9 133 4.32E-13 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like VEA_000925 1fd6ee4d63f5fd2479bd2dd729c82569 622 Gene3D G3DSA:3.10.580.10 149 309 1.8E-26 T 13-10-2018 VEA_000925 1fd6ee4d63f5fd2479bd2dd729c82569 622 Pfam PF00571 CBS domain 224 273 2.2E-7 T 13-10-2018 IPR000644 CBS domain VEA_000925 1fd6ee4d63f5fd2479bd2dd729c82569 622 Pfam PF00571 CBS domain 158 210 3.8E-5 T 13-10-2018 IPR000644 CBS domain VEA_002111 07b903f06891e811f01c65577c33e20a 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 39.705 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 VEA_002111 07b903f06891e811f01c65577c33e20a 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 4.9E-102 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 VEA_002111 07b903f06891e811f01c65577c33e20a 276 SUPERFAMILY SSF54506 2 274 2.28E-53 T 13-10-2018 VEA_002111 07b903f06891e811f01c65577c33e20a 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 13-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 VEA_002111 07b903f06891e811f01c65577c33e20a 276 Gene3D G3DSA:3.10.310.10 5 272 3.6E-107 T 13-10-2018 VEA_002111 07b903f06891e811f01c65577c33e20a 276 Gene3D G3DSA:3.10.310.10 117 263 3.6E-107 T 13-10-2018 VEA_002111 07b903f06891e811f01c65577c33e20a 276 Pfam PF01678 Diaminopimelate epimerase 5 125 5.8E-34 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 VEA_002111 07b903f06891e811f01c65577c33e20a 276 Pfam PF01678 Diaminopimelate epimerase 154 268 2.3E-31 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 VEA_001588 3bbaa58022ca6a353325996124906841 450 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 213 226 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VEA_001588 3bbaa58022ca6a353325996124906841 450 Gene3D G3DSA:3.90.640.10 336 378 1.8E-11 T 13-10-2018 VEA_001588 3bbaa58022ca6a353325996124906841 450 SUPERFAMILY SSF53067 207 447 6.17E-33 T 13-10-2018 VEA_001588 3bbaa58022ca6a353325996124906841 450 Gene3D G3DSA:3.30.420.40 379 433 1.8E-11 T 13-10-2018 VEA_001588 3bbaa58022ca6a353325996124906841 450 SUPERFAMILY SSF53067 1 205 8.42E-26 T 13-10-2018 VEA_001588 3bbaa58022ca6a353325996124906841 450 Pfam PF00012 Hsp70 protein 129 259 7.7E-11 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VEA_003905 a9cdb3298a4f7f57b7836060983ea972 203 Pfam PF03695 Uncharacterised protein family (UPF0149) 17 192 4.6E-36 T 13-10-2018 IPR011978 Uncharacterised protein family UPF0149 VEA_003905 a9cdb3298a4f7f57b7836060983ea972 203 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 14 188 2.1E-54 T 13-10-2018 IPR011978 Uncharacterised protein family UPF0149 VEA_003905 a9cdb3298a4f7f57b7836060983ea972 203 SUPERFAMILY SSF101327 15 189 1.96E-31 T 13-10-2018 IPR036255 YgfB-like superfamily VEA_001673 f8e2fa0ab0d904fabfdeaf7445fc8729 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.3E-44 T 13-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001673 f8e2fa0ab0d904fabfdeaf7445fc8729 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 13-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_001673 f8e2fa0ab0d904fabfdeaf7445fc8729 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.361 T 13-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001673 f8e2fa0ab0d904fabfdeaf7445fc8729 103 SUPERFAMILY SSF141091 1 102 2.35E-38 T 13-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001673 f8e2fa0ab0d904fabfdeaf7445fc8729 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 7.0E-40 T 13-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_000192 3811e83685c8b411479bebdce2434d8f 301 Gene3D G3DSA:3.40.190.290 92 292 4.7E-35 T 13-10-2018 VEA_000192 3811e83685c8b411479bebdce2434d8f 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.1E-20 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000192 3811e83685c8b411479bebdce2434d8f 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 8.0E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000192 3811e83685c8b411479bebdce2434d8f 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 8.0E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000192 3811e83685c8b411479bebdce2434d8f 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 8.0E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000192 3811e83685c8b411479bebdce2434d8f 301 SUPERFAMILY SSF53850 90 285 1.63E-36 T 13-10-2018 VEA_000192 3811e83685c8b411479bebdce2434d8f 301 SUPERFAMILY SSF46785 3 111 1.16E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000192 3811e83685c8b411479bebdce2434d8f 301 Pfam PF03466 LysR substrate binding domain 90 284 8.0E-42 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_000192 3811e83685c8b411479bebdce2434d8f 301 Gene3D G3DSA:1.10.10.10 3 89 2.4E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_002628 4a2e070c3ec569adbe5a036ab726da26 427 Pfam PF07670 Nucleoside recognition 99 195 6.9E-8 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VEA_002628 4a2e070c3ec569adbe5a036ab726da26 427 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 420 4.3E-154 T 13-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 VEA_002628 4a2e070c3ec569adbe5a036ab726da26 427 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 4.8E-27 T 13-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 VEA_002628 4a2e070c3ec569adbe5a036ab726da26 427 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 201 420 9.0E-74 T 13-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 VEA_001945 5fe2033b4abed51cad6c34ab4f2442d6 175 Pfam PF00210 Ferritin-like domain 8 143 4.3E-40 T 13-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 VEA_001945 5fe2033b4abed51cad6c34ab4f2442d6 175 Gene3D G3DSA:1.20.1260.10 1 175 1.2E-53 T 13-10-2018 IPR012347 Ferritin-like VEA_001945 5fe2033b4abed51cad6c34ab4f2442d6 175 SUPERFAMILY SSF47240 1 160 1.18E-58 T 13-10-2018 IPR009078 Ferritin-like superfamily VEA_003912 457877dfe437a50a3fc8f3c2b4bf7b8d 174 Gene3D G3DSA:3.30.1330.60 47 174 1.0E-40 T 13-10-2018 IPR036737 OmpA-like domain superfamily VEA_003912 457877dfe437a50a3fc8f3c2b4bf7b8d 174 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 71 174 1.9E-44 T 13-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 VEA_003912 457877dfe437a50a3fc8f3c2b4bf7b8d 174 Pfam PF00691 OmpA family 73 168 3.8E-23 T 13-10-2018 IPR006665 OmpA-like domain VEA_003912 457877dfe437a50a3fc8f3c2b4bf7b8d 174 ProSitePatterns PS01068 OmpA-like domain. 106 150 - T 13-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 VEA_003912 457877dfe437a50a3fc8f3c2b4bf7b8d 174 SUPERFAMILY SSF103088 57 173 1.01E-33 T 13-10-2018 IPR036737 OmpA-like domain superfamily VEA_003912 457877dfe437a50a3fc8f3c2b4bf7b8d 174 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 5 174 30.69 T 13-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 VEA_003912 457877dfe437a50a3fc8f3c2b4bf7b8d 174 PRINTS PR01021 OMPA domain signature 119 135 5.9E-17 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEA_003912 457877dfe437a50a3fc8f3c2b4bf7b8d 174 PRINTS PR01021 OMPA domain signature 74 96 5.9E-17 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEA_003912 457877dfe437a50a3fc8f3c2b4bf7b8d 174 PRINTS PR01021 OMPA domain signature 104 119 5.9E-17 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEA_004107 bb2abb79320bcd13cdef206630dcfd5e 262 Pfam PF00005 ABC transporter 20 148 1.1E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_004107 bb2abb79320bcd13cdef206630dcfd5e 262 Gene3D G3DSA:3.40.50.300 1 239 1.4E-55 T 13-10-2018 VEA_004107 bb2abb79320bcd13cdef206630dcfd5e 262 SUPERFAMILY SSF52540 4 217 5.24E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_004107 bb2abb79320bcd13cdef206630dcfd5e 262 SMART SM00382 29 199 1.5E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_000741 d925d939b1927440ccd44400c1ae3fd0 265 Gene3D G3DSA:2.30.30.760 206 265 1.9E-12 T 13-10-2018 VEA_000741 d925d939b1927440ccd44400c1ae3fd0 265 SMART SM00858 141 202 2.3E-8 T 13-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 VEA_000741 d925d939b1927440ccd44400c1ae3fd0 265 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 129 264 2.5E-39 T 13-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal VEA_000741 d925d939b1927440ccd44400c1ae3fd0 265 Pfam PF13144 Chaperone for flagella basal body P-ring formation 55 261 4.8E-44 T 13-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal VEA_003279 5acf5e5171725af7b7ef926d4dc8719b 41 Pfam PF11665 Protein of unknown function (DUF3265) 14 41 6.3E-16 T 13-10-2018 IPR021681 Protein of unknown function DUF3265 VEA_001155 fefa094cfdcdde3ecc27fd1bda648b35 309 SUPERFAMILY SSF102114 135 275 1.08E-16 T 13-10-2018 VEA_001155 fefa094cfdcdde3ecc27fd1bda648b35 309 Gene3D G3DSA:3.20.20.70 1 74 2.7E-14 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_001155 fefa094cfdcdde3ecc27fd1bda648b35 309 Gene3D G3DSA:3.20.20.70 99 305 2.2E-56 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_001155 fefa094cfdcdde3ecc27fd1bda648b35 309 Pfam PF04055 Radical SAM superfamily 20 247 1.7E-21 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VEA_001155 fefa094cfdcdde3ecc27fd1bda648b35 309 Pfam PF13353 4Fe-4S single cluster domain 12 166 1.7E-11 T 13-10-2018 VEA_001155 fefa094cfdcdde3ecc27fd1bda648b35 309 ProSitePatterns PS01087 Radical activating enzymes signature. 13 34 - T 13-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 VEA_001155 fefa094cfdcdde3ecc27fd1bda648b35 309 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 3 298 4.2E-96 T 13-10-2018 VEA_001155 fefa094cfdcdde3ecc27fd1bda648b35 309 PIRSF PIRSF000371 1 309 7.8E-116 T 13-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 VEA_003212 d47477b517792192df27d9bd06476781 133 Pfam PF09413 Putative prokaryotic signal transducing protein 4 65 3.2E-12 T 13-10-2018 IPR018551 Domain of unknown function DUF2007 VEA_003212 d47477b517792192df27d9bd06476781 133 SUPERFAMILY SSF54913 4 66 2.89E-9 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta VEA_002652 908e6b4ec08b193d01353028043d3c3a 337 Pfam PF13181 Tetratricopeptide repeat 278 308 0.053 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_002652 908e6b4ec08b193d01353028043d3c3a 337 SUPERFAMILY SSF48452 45 325 2.66E-25 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_002652 908e6b4ec08b193d01353028043d3c3a 337 Pfam PF13432 Tetratricopeptide repeat 192 246 2.6E-4 T 13-10-2018 VEA_002652 908e6b4ec08b193d01353028043d3c3a 337 SMART SM00028 213 246 0.39 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_002652 908e6b4ec08b193d01353028043d3c3a 337 SMART SM00028 84 117 32.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_002652 908e6b4ec08b193d01353028043d3c3a 337 SMART SM00028 118 151 260.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_002652 908e6b4ec08b193d01353028043d3c3a 337 SMART SM00028 179 212 0.026 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_002652 908e6b4ec08b193d01353028043d3c3a 337 SMART SM00028 277 310 0.0011 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_002652 908e6b4ec08b193d01353028043d3c3a 337 Gene3D G3DSA:1.25.40.10 164 335 3.2E-26 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_002652 908e6b4ec08b193d01353028043d3c3a 337 Gene3D G3DSA:1.25.40.10 40 155 2.5E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_000121 e5ddab3e5ee9f3b6b78e476bde3ea85c 319 Pfam PF00072 Response regulator receiver domain 10 117 9.8E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_000121 e5ddab3e5ee9f3b6b78e476bde3ea85c 319 Gene3D G3DSA:3.30.70.270 140 318 1.1E-50 T 13-10-2018 VEA_000121 e5ddab3e5ee9f3b6b78e476bde3ea85c 319 SMART SM00267 140 316 7.8E-49 T 13-10-2018 IPR000160 GGDEF domain VEA_000121 e5ddab3e5ee9f3b6b78e476bde3ea85c 319 Pfam PF00990 Diguanylate cyclase, GGDEF domain 151 312 1.8E-41 T 13-10-2018 IPR000160 GGDEF domain VEA_000121 e5ddab3e5ee9f3b6b78e476bde3ea85c 319 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 148 315 5.7E-44 T 13-10-2018 IPR000160 GGDEF domain VEA_000121 e5ddab3e5ee9f3b6b78e476bde3ea85c 319 SUPERFAMILY SSF55073 156 316 1.69E-43 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_000121 e5ddab3e5ee9f3b6b78e476bde3ea85c 319 SUPERFAMILY SSF52172 6 155 2.99E-37 T 13-10-2018 IPR011006 CheY-like superfamily VEA_000121 e5ddab3e5ee9f3b6b78e476bde3ea85c 319 Gene3D G3DSA:3.40.50.2300 1 139 6.6E-33 T 13-10-2018 VEA_000121 e5ddab3e5ee9f3b6b78e476bde3ea85c 319 SMART SM00448 8 120 2.7E-33 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_004286 3819eee4ebc6f0510d733caf789cfd92 196 PIRSF PIRSF004525 3 196 3.0E-15 T 13-10-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted VEA_000944 82ea89bc650d7dc3b0391a2b5cd87ccb 128 Pfam PF11012 Protein of unknown function (DUF2850) 20 98 1.7E-30 T 13-10-2018 IPR021271 Protein of unknown function DUF2850 VEA_001495 67fa466aab75c6fde9af27253ad21054 264 SUPERFAMILY SSF46689 221 259 2.33E-6 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_001495 67fa466aab75c6fde9af27253ad21054 264 Gene3D G3DSA:1.10.10.60 161 262 2.9E-18 T 13-10-2018 VEA_001495 67fa466aab75c6fde9af27253ad21054 264 SUPERFAMILY SSF51182 35 99 1.01E-7 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily VEA_001495 67fa466aab75c6fde9af27253ad21054 264 Pfam PF12833 Helix-turn-helix domain 183 259 3.6E-18 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_001495 67fa466aab75c6fde9af27253ad21054 264 Pfam PF02311 AraC-like ligand binding domain 28 101 1.6E-4 T 13-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VEA_001495 67fa466aab75c6fde9af27253ad21054 264 SUPERFAMILY SSF46689 160 212 4.93E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_001495 67fa466aab75c6fde9af27253ad21054 264 SMART SM00342 177 259 4.3E-17 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_000186 27a8ccdcf4cabc07d12b4b0aa14dfd8d 185 SMART SM00782 6 52 2.4E-28 T 13-10-2018 IPR013991 PhnA protein N-terminal, proteobacterial VEA_000186 27a8ccdcf4cabc07d12b4b0aa14dfd8d 185 Pfam PF03831 PhnA domain 119 184 2.2E-22 T 13-10-2018 IPR013988 PhnA protein, C-terminal VEA_000186 27a8ccdcf4cabc07d12b4b0aa14dfd8d 185 Gene3D G3DSA:2.30.30.40 115 185 8.5E-24 T 13-10-2018 VEA_000186 27a8ccdcf4cabc07d12b4b0aa14dfd8d 185 SUPERFAMILY SSF82057 115 184 2.56E-20 T 13-10-2018 VEA_000186 27a8ccdcf4cabc07d12b4b0aa14dfd8d 185 Pfam PF08274 PhnA Zinc-Ribbon 13 52 2.9E-10 T 13-10-2018 IPR013987 PhnA protein, N-terminal VEA_003440 680133c78f9d6fe27094ade7395446a3 639 Pfam PF00005 ABC transporter 336 469 1.3E-24 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_003440 680133c78f9d6fe27094ade7395446a3 639 SUPERFAMILY SSF52540 311 518 2.74E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003440 680133c78f9d6fe27094ade7395446a3 639 Gene3D G3DSA:1.10.287.380 555 638 4.7E-29 T 13-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 VEA_003440 680133c78f9d6fe27094ade7395446a3 639 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_003440 680133c78f9d6fe27094ade7395446a3 639 Pfam PF12848 ABC transporter 224 297 1.4E-11 T 13-10-2018 IPR032781 ABC-transporter extension domain VEA_003440 680133c78f9d6fe27094ade7395446a3 639 Pfam PF00005 ABC transporter 19 185 5.1E-24 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_003440 680133c78f9d6fe27094ade7395446a3 639 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_003440 680133c78f9d6fe27094ade7395446a3 639 Gene3D G3DSA:3.40.50.300 281 551 1.8E-68 T 13-10-2018 VEA_003440 680133c78f9d6fe27094ade7395446a3 639 Pfam PF16326 ABC transporter C-terminal domain 565 633 7.7E-22 T 13-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 VEA_003440 680133c78f9d6fe27094ade7395446a3 639 Gene3D G3DSA:3.40.50.300 4 279 1.9E-68 T 13-10-2018 VEA_003440 680133c78f9d6fe27094ade7395446a3 639 SMART SM00382 344 514 1.5E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_003440 680133c78f9d6fe27094ade7395446a3 639 SMART SM00382 28 230 7.1E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_003440 680133c78f9d6fe27094ade7395446a3 639 SUPERFAMILY SSF52540 3 241 5.42E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002708 d8457214ad650d8ecd3d555a8964961e 414 Pfam PF03116 NQR2, RnfD, RnfE family 41 405 1.0E-107 T 13-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 VEA_002708 d8457214ad650d8ecd3d555a8964961e 414 PIRSF PIRSF016055 1 414 9.7E-200 T 13-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 VEA_002708 d8457214ad650d8ecd3d555a8964961e 414 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 412 36.505 T 13-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 VEA_002708 d8457214ad650d8ecd3d555a8964961e 414 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 408 7.6E-206 T 13-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 VEA_001410 ec2b133f3a43321eafea27706bd83f1a 113 SUPERFAMILY SSF46785 21 110 1.49E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_001410 ec2b133f3a43321eafea27706bd83f1a 113 SMART SM00418 28 110 9.7E-11 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEA_001410 ec2b133f3a43321eafea27706bd83f1a 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 30 45 8.4E-8 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEA_001410 ec2b133f3a43321eafea27706bd83f1a 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 66 81 8.4E-8 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEA_001410 ec2b133f3a43321eafea27706bd83f1a 113 Gene3D G3DSA:1.10.10.10 10 110 1.0E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001410 ec2b133f3a43321eafea27706bd83f1a 113 Pfam PF01022 Bacterial regulatory protein, arsR family 35 84 6.8E-12 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VEA_003776 ae0c1666aac7d6ab93bff1523e366e1c 754 TIGRFAM TIGR03507 decahem_SO1788: decaheme c-type cytochrome, OmcA/MtrC family 53 748 9.3E-128 T 13-10-2018 IPR020014 Decahaem cytochrome, c-type, OmcA/MtrC VEA_003776 ae0c1666aac7d6ab93bff1523e366e1c 754 Gene3D G3DSA:3.90.10.10 282 387 6.0E-5 T 13-10-2018 VEA_003776 ae0c1666aac7d6ab93bff1523e366e1c 754 SUPERFAMILY SSF48695 192 736 5.06E-36 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily VEA_003616 2686be40ce51697c3a27405472edfdc2 211 Gene3D G3DSA:1.25.40.10 16 190 3.2E-14 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_003616 2686be40ce51697c3a27405472edfdc2 211 Pfam PF13181 Tetratricopeptide repeat 137 155 0.034 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_003616 2686be40ce51697c3a27405472edfdc2 211 SUPERFAMILY SSF48452 50 181 3.03E-13 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_003183 c38990a049985a29c82163bb7dce84af 205 Pfam PF02698 DUF218 domain 47 167 6.9E-26 T 13-10-2018 IPR003848 Domain of unknown function DUF218 VEA_003183 c38990a049985a29c82163bb7dce84af 205 Gene3D G3DSA:3.40.50.620 82 166 1.5E-5 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_004353 5afce5e9127504c8139343a8f8eb673b 432 Gene3D G3DSA:3.40.630.10 91 431 2.6E-107 T 13-10-2018 VEA_004353 5afce5e9127504c8139343a8f8eb673b 432 Pfam PF12404 Peptidase 5 81 8.9E-34 T 13-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 VEA_004353 5afce5e9127504c8139343a8f8eb673b 432 Hamap MF_00504 Peptidase B [pepB]. 3 428 65.662 T 13-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 VEA_004353 5afce5e9127504c8139343a8f8eb673b 432 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 276 283 - T 13-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VEA_004353 5afce5e9127504c8139343a8f8eb673b 432 SUPERFAMILY SSF53187 104 428 4.39E-101 T 13-10-2018 VEA_004353 5afce5e9127504c8139343a8f8eb673b 432 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 109 422 1.1E-103 T 13-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VEA_004353 5afce5e9127504c8139343a8f8eb673b 432 PRINTS PR00481 Cytosol aminopeptidase signature 272 292 1.2E-45 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VEA_004353 5afce5e9127504c8139343a8f8eb673b 432 PRINTS PR00481 Cytosol aminopeptidase signature 191 208 1.2E-45 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VEA_004353 5afce5e9127504c8139343a8f8eb673b 432 PRINTS PR00481 Cytosol aminopeptidase signature 250 271 1.2E-45 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VEA_004353 5afce5e9127504c8139343a8f8eb673b 432 PRINTS PR00481 Cytosol aminopeptidase signature 300 315 1.2E-45 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VEA_004353 5afce5e9127504c8139343a8f8eb673b 432 PRINTS PR00481 Cytosol aminopeptidase signature 213 234 1.2E-45 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VEA_004353 5afce5e9127504c8139343a8f8eb673b 432 PIRSF PIRSF036388 1 432 2.5E-223 T 13-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 VEA_001630 966348926db09aa6d7dff5148c3449fb 582 SUPERFAMILY SSF69593 47 248 6.8E-9 T 13-10-2018 VEA_001630 966348926db09aa6d7dff5148c3449fb 582 Gene3D G3DSA:3.40.630.30 312 458 7.7E-8 T 13-10-2018 VEA_001630 966348926db09aa6d7dff5148c3449fb 582 Pfam PF13444 Acetyltransferase (GNAT) domain 330 431 7.4E-23 T 13-10-2018 VEA_001630 966348926db09aa6d7dff5148c3449fb 582 SMART SM00563 75 199 4.8E-4 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VEA_001630 966348926db09aa6d7dff5148c3449fb 582 SUPERFAMILY SSF55729 313 459 4.18E-23 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_002974 ce42ba12f655306eb68c02150df5413b 491 Gene3D G3DSA:3.30.70.270 319 488 1.6E-45 T 13-10-2018 VEA_002974 ce42ba12f655306eb68c02150df5413b 491 SUPERFAMILY SSF55073 337 486 1.49E-36 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_002974 ce42ba12f655306eb68c02150df5413b 491 SMART SM00267 321 487 3.1E-43 T 13-10-2018 IPR000160 GGDEF domain VEA_002974 ce42ba12f655306eb68c02150df5413b 491 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 330 486 5.8E-43 T 13-10-2018 IPR000160 GGDEF domain VEA_002974 ce42ba12f655306eb68c02150df5413b 491 Pfam PF00990 Diguanylate cyclase, GGDEF domain 332 483 5.0E-38 T 13-10-2018 IPR000160 GGDEF domain VEA_002013 d979041072884e9e71b07b5e6728e1a6 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 43 3.8E-26 T 13-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002013 d979041072884e9e71b07b5e6728e1a6 44 Pfam PF00468 Ribosomal protein L34 1 43 4.9E-24 T 13-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002013 d979041072884e9e71b07b5e6728e1a6 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.4 T 13-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002013 d979041072884e9e71b07b5e6728e1a6 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 13-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_002013 d979041072884e9e71b07b5e6728e1a6 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 39 1.0E-14 T 13-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_002513 507c1edf26e76a2bb94692c13bc97685 258 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 11 257 40.966 T 13-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 VEA_002513 507c1edf26e76a2bb94692c13bc97685 258 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 12 242 9.7E-74 T 13-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 VEA_002513 507c1edf26e76a2bb94692c13bc97685 258 SUPERFAMILY SSF64167 11 256 2.35E-85 T 13-10-2018 VEA_002513 507c1edf26e76a2bb94692c13bc97685 258 Gene3D G3DSA:3.40.1210.10 2 258 1.4E-95 T 13-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 VEA_002513 507c1edf26e76a2bb94692c13bc97685 258 Pfam PF01975 Survival protein SurE 13 191 3.3E-61 T 13-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 VEA_002662 facdc98c24e2f9c3e3cc8f65527784ed 386 SUPERFAMILY SSF55060 205 382 3.6E-53 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VEA_002662 facdc98c24e2f9c3e3cc8f65527784ed 386 SUPERFAMILY SSF54211 2 204 9.87E-65 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEA_002662 facdc98c24e2f9c3e3cc8f65527784ed 386 Pfam PF10509 Galactokinase galactose-binding signature 11 59 5.9E-22 T 13-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VEA_002662 facdc98c24e2f9c3e3cc8f65527784ed 386 PIRSF PIRSF000530 1 385 3.3E-129 T 13-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VEA_002662 facdc98c24e2f9c3e3cc8f65527784ed 386 ProSitePatterns PS00106 Galactokinase signature. 28 39 - T 13-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VEA_002662 facdc98c24e2f9c3e3cc8f65527784ed 386 TIGRFAM TIGR00131 gal_kin: galactokinase 6 381 5.8E-147 T 13-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VEA_002662 facdc98c24e2f9c3e3cc8f65527784ed 386 PRINTS PR00959 Mevalonate kinase family signature 26 50 4.3E-44 T 13-10-2018 VEA_002662 facdc98c24e2f9c3e3cc8f65527784ed 386 PRINTS PR00959 Mevalonate kinase family signature 120 142 4.3E-44 T 13-10-2018 VEA_002662 facdc98c24e2f9c3e3cc8f65527784ed 386 PRINTS PR00959 Mevalonate kinase family signature 329 346 4.3E-44 T 13-10-2018 VEA_002662 facdc98c24e2f9c3e3cc8f65527784ed 386 PRINTS PR00959 Mevalonate kinase family signature 163 182 4.3E-44 T 13-10-2018 VEA_002662 facdc98c24e2f9c3e3cc8f65527784ed 386 PRINTS PR00473 Galactokinase signature 93 104 9.4E-30 T 13-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VEA_002662 facdc98c24e2f9c3e3cc8f65527784ed 386 PRINTS PR00473 Galactokinase signature 264 278 9.4E-30 T 13-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VEA_002662 facdc98c24e2f9c3e3cc8f65527784ed 386 PRINTS PR00473 Galactokinase signature 113 131 9.4E-30 T 13-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VEA_002662 facdc98c24e2f9c3e3cc8f65527784ed 386 PRINTS PR00473 Galactokinase signature 28 46 9.4E-30 T 13-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VEA_002662 facdc98c24e2f9c3e3cc8f65527784ed 386 Gene3D G3DSA:3.30.70.890 203 358 1.7E-132 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VEA_002662 facdc98c24e2f9c3e3cc8f65527784ed 386 Pfam PF00288 GHMP kinases N terminal domain 115 181 7.9E-11 T 13-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 VEA_002662 facdc98c24e2f9c3e3cc8f65527784ed 386 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 122 133 - T 13-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 VEA_002662 facdc98c24e2f9c3e3cc8f65527784ed 386 Pfam PF08544 GHMP kinases C terminal 280 361 7.1E-11 T 13-10-2018 IPR013750 GHMP kinase, C-terminal domain VEA_002662 facdc98c24e2f9c3e3cc8f65527784ed 386 Gene3D G3DSA:3.30.230.10 23 202 1.7E-132 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VEA_002662 facdc98c24e2f9c3e3cc8f65527784ed 386 Hamap MF_00246 Galactokinase [galK]. 26 382 44.109 T 13-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 VEA_000814 df9e67e5626b46eb3ae998fa0e6e49b6 402 Gene3D G3DSA:3.30.70.270 220 387 1.5E-46 T 13-10-2018 VEA_000814 df9e67e5626b46eb3ae998fa0e6e49b6 402 SMART SM00267 215 384 1.8E-48 T 13-10-2018 IPR000160 GGDEF domain VEA_000814 df9e67e5626b46eb3ae998fa0e6e49b6 402 SUPERFAMILY SSF55073 231 385 1.41E-39 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_000814 df9e67e5626b46eb3ae998fa0e6e49b6 402 Pfam PF00990 Diguanylate cyclase, GGDEF domain 226 380 6.8E-41 T 13-10-2018 IPR000160 GGDEF domain VEA_000814 df9e67e5626b46eb3ae998fa0e6e49b6 402 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 225 383 3.4E-43 T 13-10-2018 IPR000160 GGDEF domain VEA_000606 2b3b07bcb3d8e04d194b30ba9cca5a35 380 SUPERFAMILY SSF56935 33 372 1.52E-21 T 13-10-2018 VEA_000606 2b3b07bcb3d8e04d194b30ba9cca5a35 380 Gene3D G3DSA:2.40.160.10 29 363 2.5E-9 T 13-10-2018 IPR023614 Porin domain superfamily VEA_001156 59d08fab825c8ea662cc9c88ca7a6d3e 807 SUPERFAMILY SSF51998 4 806 5.95E-223 T 13-10-2018 VEA_001156 59d08fab825c8ea662cc9c88ca7a6d3e 807 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 6 807 0.0 T 13-10-2018 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 VEA_001156 59d08fab825c8ea662cc9c88ca7a6d3e 807 Pfam PF02901 Pyruvate formate lyase-like 8 668 1.4E-219 T 13-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 VEA_001156 59d08fab825c8ea662cc9c88ca7a6d3e 807 Pfam PF01228 Glycine radical 685 788 3.6E-30 T 13-10-2018 IPR001150 Glycine radical domain GO:0003824 VEA_001156 59d08fab825c8ea662cc9c88ca7a6d3e 807 Gene3D G3DSA:3.20.70.20 7 807 1.8E-278 T 13-10-2018 VEA_001156 59d08fab825c8ea662cc9c88ca7a6d3e 807 PIRSF PIRSF000379 11 807 9.9E-168 T 13-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 VEA_001156 59d08fab825c8ea662cc9c88ca7a6d3e 807 ProSitePatterns PS00850 Glycine radical domain signature. 778 786 - T 13-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VEA_002097 1f1bc86dad0744e1dd83bbdaaa1e579f 108 PIRSF PIRSF000077 2 108 1.5E-42 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VEA_002097 1f1bc86dad0744e1dd83bbdaaa1e579f 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VEA_002097 1f1bc86dad0744e1dd83bbdaaa1e579f 108 Pfam PF00085 Thioredoxin 5 106 1.1E-32 T 13-10-2018 IPR013766 Thioredoxin domain GO:0045454 VEA_002097 1f1bc86dad0744e1dd83bbdaaa1e579f 108 Gene3D G3DSA:3.40.30.10 1 108 5.6E-35 T 13-10-2018 VEA_002097 1f1bc86dad0744e1dd83bbdaaa1e579f 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.3E-10 T 13-10-2018 VEA_002097 1f1bc86dad0744e1dd83bbdaaa1e579f 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.3E-10 T 13-10-2018 VEA_002097 1f1bc86dad0744e1dd83bbdaaa1e579f 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.3E-10 T 13-10-2018 VEA_002097 1f1bc86dad0744e1dd83bbdaaa1e579f 108 SUPERFAMILY SSF52833 3 107 3.72E-38 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VEA_002097 1f1bc86dad0744e1dd83bbdaaa1e579f 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 3.5E-37 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VEA_000434 2009cdd8fb46b523649098e3da59e2d4 437 Pfam PF06812 ImpA, N-terminal, type VI secretion system 9 119 4.1E-26 T 13-10-2018 IPR010657 ImpA, N-terminal VEA_003313 11c85095ed91cc88e77d5885403d1abc 330 Pfam PF11168 Protein of unknown function (DUF2955) 9 146 1.9E-14 T 13-10-2018 IPR022604 Protein of unknown function DUF2955 VEA_000264 c3f0289212cb30df87a90908985a37dd 156 Pfam PF08808 RES domain 2 151 8.4E-26 T 13-10-2018 IPR014914 RES domain VEA_000264 c3f0289212cb30df87a90908985a37dd 156 SMART SM00953 15 143 2.1E-15 T 13-10-2018 IPR014914 RES domain VEA_002982 48b285e0a0348d36f423fb2b485cd149 358 ProSitePatterns PS01215 Mrp family signature. 201 217 - T 13-10-2018 IPR000808 Mrp, conserved site GO:0005524 VEA_002982 48b285e0a0348d36f423fb2b485cd149 358 Gene3D G3DSA:3.40.50.300 80 336 2.1E-83 T 13-10-2018 VEA_002982 48b285e0a0348d36f423fb2b485cd149 358 Hamap MF_02040 Iron-sulfur cluster carrier protein. 89 338 36.676 T 13-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein VEA_002982 48b285e0a0348d36f423fb2b485cd149 358 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 94 337 3.0E-99 T 13-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 VEA_002982 48b285e0a0348d36f423fb2b485cd149 358 SUPERFAMILY SSF52540 85 318 3.66E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001961 82d6149d2fc2da64456c0121abe7cc00 109 Gene3D G3DSA:1.10.3730.20 7 109 2.8E-21 T 13-10-2018 VEA_001961 82d6149d2fc2da64456c0121abe7cc00 109 Pfam PF00893 Small Multidrug Resistance protein 7 99 3.7E-20 T 13-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 VEA_001961 82d6149d2fc2da64456c0121abe7cc00 109 SUPERFAMILY SSF103481 11 107 3.27E-15 T 13-10-2018 VEA_003657 fe9e8c9f2ab1253a7deb4e7bf2cb6321 536 Gene3D G3DSA:3.90.76.10 68 191 1.8E-168 T 13-10-2018 VEA_003657 fe9e8c9f2ab1253a7deb4e7bf2cb6321 536 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 458 6.1E-87 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain VEA_003657 fe9e8c9f2ab1253a7deb4e7bf2cb6321 536 SUPERFAMILY SSF53850 35 529 4.16E-129 T 13-10-2018 VEA_003657 fe9e8c9f2ab1253a7deb4e7bf2cb6321 536 PIRSF PIRSF002741 1 536 1.6E-101 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VEA_003657 fe9e8c9f2ab1253a7deb4e7bf2cb6321 536 Gene3D G3DSA:3.40.190.10 39 517 1.8E-168 T 13-10-2018 VEA_003657 fe9e8c9f2ab1253a7deb4e7bf2cb6321 536 Gene3D G3DSA:3.10.105.10 294 505 1.8E-168 T 13-10-2018 VEA_000118 6b79ee4d3473dea00b97bf8e63eb95b0 228 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 10 219 1.1E-71 T 13-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 VEA_000118 6b79ee4d3473dea00b97bf8e63eb95b0 228 SUPERFAMILY SSF161098 6 217 1.1E-48 T 13-10-2018 IPR035906 MetI-like superfamily VEA_000118 6b79ee4d3473dea00b97bf8e63eb95b0 228 Gene3D G3DSA:1.10.3720.10 3 224 5.3E-59 T 13-10-2018 IPR035906 MetI-like superfamily VEA_000118 6b79ee4d3473dea00b97bf8e63eb95b0 228 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 24 213 7.3E-21 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_001203 e0b7a50fd517370bdb23c09e68e690de 227 Pfam PF06468 Spondin_N 40 157 8.8E-10 T 13-10-2018 IPR009465 Spondin, N-terminal Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 VEA_001203 e0b7a50fd517370bdb23c09e68e690de 227 Gene3D G3DSA:2.60.40.2130 28 169 1.4E-12 T 13-10-2018 IPR038678 Spondin, N-terminal domain superfamily Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 VEA_002795 e8f836a8bd0481f521062d1b7f93878d 67 Pfam PF11446 Protein of unknown function (DUF2897) 5 54 5.3E-21 T 13-10-2018 IPR021550 Protein of unknown function DUF2897 VEA_001978 84edcf6d01b0d44c05c0eb49098cbbff 671 Gene3D G3DSA:3.40.50.300 4 266 7.7E-100 T 13-10-2018 VEA_001978 84edcf6d01b0d44c05c0eb49098cbbff 671 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 669 0.0 T 13-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 VEA_001978 84edcf6d01b0d44c05c0eb49098cbbff 671 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 6.1E-78 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 VEA_001978 84edcf6d01b0d44c05c0eb49098cbbff 671 Pfam PF13361 UvrD-like helicase C-terminal domain 271 615 1.7E-73 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VEA_001978 84edcf6d01b0d44c05c0eb49098cbbff 671 Gene3D G3DSA:3.40.50.300 274 634 2.0E-123 T 13-10-2018 VEA_001978 84edcf6d01b0d44c05c0eb49098cbbff 671 SUPERFAMILY SSF52540 1 640 1.01E-162 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001978 84edcf6d01b0d44c05c0eb49098cbbff 671 Gene3D G3DSA:1.10.486.10 377 546 2.0E-123 T 13-10-2018 VEA_001978 84edcf6d01b0d44c05c0eb49098cbbff 671 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 670 40.786 T 13-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 VEA_001978 84edcf6d01b0d44c05c0eb49098cbbff 671 Gene3D G3DSA:1.10.10.160 108 181 7.7E-100 T 13-10-2018 IPR013986 DExx box DNA helicase domain superfamily VEA_001747 c1914b78f06fc0eecad7b3bdb66872f7 144 Gene3D G3DSA:3.30.70.1070 64 142 3.8E-28 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VEA_001747 c1914b78f06fc0eecad7b3bdb66872f7 144 Pfam PF05036 Sporulation related domain 70 139 1.5E-14 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 VEA_001747 c1914b78f06fc0eecad7b3bdb66872f7 144 SUPERFAMILY SSF110997 69 141 2.75E-17 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VEA_001747 c1914b78f06fc0eecad7b3bdb66872f7 144 TIGRFAM TIGR02223 ftsN: cell division protein FtsN 62 141 9.2E-33 T 13-10-2018 IPR011930 Cell division protein FtsN GO:0005515 VEA_000127 dff032b6418284fc98a1aae1a671a0f9 458 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 456 5.2E-204 T 13-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 VEA_000127 dff032b6418284fc98a1aae1a671a0f9 458 PIRSF PIRSF000204 1 458 2.1E-235 T 13-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 VEA_000127 dff032b6418284fc98a1aae1a671a0f9 458 SUPERFAMILY SSF52467 285 458 2.94E-78 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VEA_000127 dff032b6418284fc98a1aae1a671a0f9 458 Gene3D G3DSA:3.40.50.1220 282 458 6.4E-89 T 13-10-2018 VEA_003305 d22eb47d4bd2c70f7a9260e67b3c8657 117 Gene3D G3DSA:3.30.70.100 1 117 1.2E-45 T 13-10-2018 VEA_003305 d22eb47d4bd2c70f7a9260e67b3c8657 117 Pfam PF07237 Protein of unknown function (DUF1428) 2 103 1.5E-44 T 13-10-2018 IPR009874 Protein of unknown function DUF1428 VEA_003305 d22eb47d4bd2c70f7a9260e67b3c8657 117 SUPERFAMILY SSF54909 1 116 5.04E-51 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel VEA_003305 d22eb47d4bd2c70f7a9260e67b3c8657 117 PIRSF PIRSF007028 1 117 4.2E-47 T 13-10-2018 IPR009874 Protein of unknown function DUF1428 VEA_002636 5e4ce32cec659e41b65630891dcbd9cf 459 SUPERFAMILY SSF54211 257 456 4.55E-43 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VEA_002636 5e4ce32cec659e41b65630891dcbd9cf 459 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 453 2.5E-225 T 13-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 VEA_002636 5e4ce32cec659e41b65630891dcbd9cf 459 Hamap MF_01498 DNA repair protein RadA [radA]. 21 457 43.081 T 13-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 VEA_002636 5e4ce32cec659e41b65630891dcbd9cf 459 Pfam PF13541 Subunit ChlI of Mg-chelatase 347 432 1.4E-9 T 13-10-2018 VEA_002636 5e4ce32cec659e41b65630891dcbd9cf 459 Gene3D G3DSA:3.30.230.10 328 459 8.6E-17 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VEA_002636 5e4ce32cec659e41b65630891dcbd9cf 459 Gene3D G3DSA:3.40.50.300 68 281 1.5E-38 T 13-10-2018 VEA_002636 5e4ce32cec659e41b65630891dcbd9cf 459 Pfam PF13481 AAA domain 85 224 1.4E-13 T 13-10-2018 VEA_002636 5e4ce32cec659e41b65630891dcbd9cf 459 SUPERFAMILY SSF52540 70 294 5.74E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002636 5e4ce32cec659e41b65630891dcbd9cf 459 SMART SM00382 93 246 7.1E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_002636 5e4ce32cec659e41b65630891dcbd9cf 459 PRINTS PR01874 DNA repair protein radA signature 176 200 7.5E-94 T 13-10-2018 VEA_002636 5e4ce32cec659e41b65630891dcbd9cf 459 PRINTS PR01874 DNA repair protein radA signature 324 347 7.5E-94 T 13-10-2018 VEA_002636 5e4ce32cec659e41b65630891dcbd9cf 459 PRINTS PR01874 DNA repair protein radA signature 85 113 7.5E-94 T 13-10-2018 VEA_002636 5e4ce32cec659e41b65630891dcbd9cf 459 PRINTS PR01874 DNA repair protein radA signature 215 243 7.5E-94 T 13-10-2018 VEA_002636 5e4ce32cec659e41b65630891dcbd9cf 459 PRINTS PR01874 DNA repair protein radA signature 10 34 7.5E-94 T 13-10-2018 VEA_002636 5e4ce32cec659e41b65630891dcbd9cf 459 PRINTS PR01874 DNA repair protein radA signature 126 143 7.5E-94 T 13-10-2018 VEA_002636 5e4ce32cec659e41b65630891dcbd9cf 459 PRINTS PR01874 DNA repair protein radA signature 250 276 7.5E-94 T 13-10-2018 VEA_001050 7bdf3e10b46d180f2ceecc7532620832 221 Gene3D G3DSA:3.40.50.300 1 221 5.0E-57 T 13-10-2018 VEA_001050 7bdf3e10b46d180f2ceecc7532620832 221 SUPERFAMILY SSF52540 1 206 3.25E-55 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001050 7bdf3e10b46d180f2ceecc7532620832 221 SMART SM00382 11 194 3.1E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_001050 7bdf3e10b46d180f2ceecc7532620832 221 Pfam PF00005 ABC transporter 2 147 1.4E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_001050 7bdf3e10b46d180f2ceecc7532620832 221 ProSitePatterns PS00211 ABC transporters family signature. 120 134 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_000666 2df8246cb0cb70eea277577dc2ee2c4d 219 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 5 204 3.0E-52 T 13-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like VEA_000666 2df8246cb0cb70eea277577dc2ee2c4d 219 SUPERFAMILY SSF56784 1 214 6.83E-33 T 13-10-2018 IPR036412 HAD-like superfamily VEA_000666 2df8246cb0cb70eea277577dc2ee2c4d 219 Gene3D G3DSA:3.40.50.1000 6 215 2.4E-57 T 13-10-2018 IPR023214 HAD superfamily VEA_000666 2df8246cb0cb70eea277577dc2ee2c4d 219 Pfam PF12710 haloacid dehalogenase-like hydrolase 7 189 1.1E-30 T 13-10-2018 VEA_000666 2df8246cb0cb70eea277577dc2ee2c4d 219 Gene3D G3DSA:1.20.1440.100 17 90 2.4E-57 T 13-10-2018 VEA_000666 2df8246cb0cb70eea277577dc2ee2c4d 219 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 190 3.7E-28 T 13-10-2018 VEA_004160 767473ad12b6c1126e249df42fba7005 374 Pfam PF00700 Bacterial flagellin C-terminal helical region 289 373 1.9E-21 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VEA_004160 767473ad12b6c1126e249df42fba7005 374 SUPERFAMILY SSF64518 1 373 1.14E-78 T 13-10-2018 VEA_004160 767473ad12b6c1126e249df42fba7005 374 Gene3D G3DSA:2.170.280.10 184 281 2.5E-34 T 13-10-2018 VEA_004160 767473ad12b6c1126e249df42fba7005 374 Gene3D G3DSA:1.20.1330.10 282 333 2.5E-34 T 13-10-2018 VEA_004160 767473ad12b6c1126e249df42fba7005 374 Gene3D G3DSA:1.20.1330.10 44 165 1.5E-58 T 13-10-2018 VEA_004160 767473ad12b6c1126e249df42fba7005 374 PRINTS PR00207 Flagellin signature 36 53 2.8E-21 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VEA_004160 767473ad12b6c1126e249df42fba7005 374 PRINTS PR00207 Flagellin signature 110 133 2.8E-21 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VEA_004160 767473ad12b6c1126e249df42fba7005 374 PRINTS PR00207 Flagellin signature 75 94 2.8E-21 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VEA_004160 767473ad12b6c1126e249df42fba7005 374 Pfam PF07196 Flagellin hook IN motif 200 245 2.5E-6 T 13-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VEA_004160 767473ad12b6c1126e249df42fba7005 374 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 140 7.7E-35 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VEA_004160 767473ad12b6c1126e249df42fba7005 374 Gene3D G3DSA:1.20.58.1830 5 32 1.5E-58 T 13-10-2018 VEA_004160 767473ad12b6c1126e249df42fba7005 374 Gene3D G3DSA:1.20.58.1830 339 373 2.5E-34 T 13-10-2018 VEA_003919 3cd22e08fd674eb53e4dbf06352a574e 35 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 30 1.1E-20 T 13-10-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 VEA_003919 3cd22e08fd674eb53e4dbf06352a574e 35 Pfam PF08173 Membrane bound YbgT-like protein 1 27 1.3E-17 T 13-10-2018 IPR012994 Membrane bound YbgT-like VEA_000213 7ff2ec095b8605de8880127e60f4d327 215 Pfam PF07947 YhhN family 24 204 1.2E-41 T 13-10-2018 IPR012506 YhhN-like GO:0016021 VEA_004195 8642f4b5205f1d762eb4c77fc110cd83 193 Pfam PF01713 Smr domain 95 175 5.6E-21 T 13-10-2018 IPR002625 Smr domain VEA_004195 8642f4b5205f1d762eb4c77fc110cd83 193 SMART SM00463 92 175 1.4E-14 T 13-10-2018 IPR002625 Smr domain VEA_004195 8642f4b5205f1d762eb4c77fc110cd83 193 SUPERFAMILY SSF160443 93 175 3.14E-14 T 13-10-2018 IPR036063 Smr domain superfamily VEA_004195 8642f4b5205f1d762eb4c77fc110cd83 193 Gene3D G3DSA:3.30.1370.110 46 181 3.3E-43 T 13-10-2018 VEA_004364 e4bb0d9b7bb63e8a5fc4e00f94d7c2d3 315 SUPERFAMILY SSF82866 74 293 8.5E-41 T 13-10-2018 VEA_004364 e4bb0d9b7bb63e8a5fc4e00f94d7c2d3 315 Gene3D G3DSA:1.20.1640.10 105 300 2.4E-12 T 13-10-2018 VEA_004364 e4bb0d9b7bb63e8a5fc4e00f94d7c2d3 315 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 39 285 2.0E-85 T 13-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 VEA_004364 e4bb0d9b7bb63e8a5fc4e00f94d7c2d3 315 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 11 296 28.845 T 13-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 VEA_004364 e4bb0d9b7bb63e8a5fc4e00f94d7c2d3 315 Pfam PF02355 Protein export membrane protein 113 292 3.0E-70 T 13-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VEA_004364 e4bb0d9b7bb63e8a5fc4e00f94d7c2d3 315 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 118 282 4.7E-56 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VEA_004364 e4bb0d9b7bb63e8a5fc4e00f94d7c2d3 315 PRINTS PR01755 Bacterial translocase SecF protein signature 233 248 3.9E-32 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VEA_004364 e4bb0d9b7bb63e8a5fc4e00f94d7c2d3 315 PRINTS PR01755 Bacterial translocase SecF protein signature 38 53 3.9E-32 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VEA_004364 e4bb0d9b7bb63e8a5fc4e00f94d7c2d3 315 PRINTS PR01755 Bacterial translocase SecF protein signature 201 219 3.9E-32 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VEA_004364 e4bb0d9b7bb63e8a5fc4e00f94d7c2d3 315 PRINTS PR01755 Bacterial translocase SecF protein signature 153 167 3.9E-32 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VEA_004364 e4bb0d9b7bb63e8a5fc4e00f94d7c2d3 315 Pfam PF07549 SecD/SecF GG Motif 35 60 1.1E-10 T 13-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VEA_001944 d868e2c4104b7fdf3457c06410874bc3 107 Pfam PF10625 Universal stress protein B (UspB) 1 106 1.8E-51 T 13-10-2018 IPR019598 Universal stress protein B VEA_001944 d868e2c4104b7fdf3457c06410874bc3 107 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 39.364 T 13-10-2018 IPR019598 Universal stress protein B VEA_002287 5cfff304d6e42e4a965ccb80bd46e163 66 Pfam PF09526 Probable metal-binding protein (DUF2387) 4 52 9.0E-21 T 13-10-2018 IPR012658 Conserved hypothetical protein CHP02443 VEA_002287 5cfff304d6e42e4a965ccb80bd46e163 66 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 2 60 7.6E-32 T 13-10-2018 IPR012658 Conserved hypothetical protein CHP02443 VEA_001586 96ce067cde9b0bfb964270e31592cc61 106 PIRSF PIRSF028139 1 106 5.7E-40 T 13-10-2018 IPR014980 Dopa 4,5-dioxygenase VEA_001586 96ce067cde9b0bfb964270e31592cc61 106 Gene3D G3DSA:3.30.70.1240 1 104 4.8E-29 T 13-10-2018 IPR023389 DOPA-like superfamily VEA_001586 96ce067cde9b0bfb964270e31592cc61 106 SUPERFAMILY SSF143410 1 102 8.37E-33 T 13-10-2018 IPR023389 DOPA-like superfamily VEA_001586 96ce067cde9b0bfb964270e31592cc61 106 Pfam PF08883 Dopa 4,5-dioxygenase family 2 99 8.7E-27 T 13-10-2018 IPR014980 Dopa 4,5-dioxygenase VEA_000139 db4e64ad005d5153cb24ce7e811aeede 234 SUPERFAMILY SSF56024 10 139 4.24E-8 T 13-10-2018 VEA_000139 db4e64ad005d5153cb24ce7e811aeede 234 Gene3D G3DSA:3.30.870.10 3 144 1.4E-7 T 13-10-2018 VEA_000139 db4e64ad005d5153cb24ce7e811aeede 234 Pfam PF13091 PLD-like domain 15 127 7.5E-7 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VEA_004521 a869339d0a3cd7b9ac3dc65ebb62e37b 216 ProSitePatterns PS00893 Nudix box signature. 96 117 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VEA_004521 a869339d0a3cd7b9ac3dc65ebb62e37b 216 SUPERFAMILY SSF55811 9 205 1.18E-45 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VEA_004521 a869339d0a3cd7b9ac3dc65ebb62e37b 216 Gene3D G3DSA:3.90.79.10 1 208 2.2E-64 T 13-10-2018 VEA_004521 a869339d0a3cd7b9ac3dc65ebb62e37b 216 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 14 198 1.2E-65 T 13-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 VEA_004521 a869339d0a3cd7b9ac3dc65ebb62e37b 216 Pfam PF00293 NUDIX domain 57 175 4.5E-10 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VEA_003363 391320b4c5b71fb9515e174a8e7465cf 322 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 247 314 1.1E-20 T 13-10-2018 IPR001543 Surface presentation of antigen (SpoA) VEA_003363 391320b4c5b71fb9515e174a8e7465cf 322 TIGRFAM TIGR02551 SpaO_YscQ: type III secretion apparatus protein, YscQ/HrcQ family 40 314 3.6E-67 T 13-10-2018 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO GO:0030254 VEA_003363 391320b4c5b71fb9515e174a8e7465cf 322 Gene3D G3DSA:2.30.330.10 231 319 1.2E-27 T 13-10-2018 IPR036429 SpoA-like superfamily VEA_003363 391320b4c5b71fb9515e174a8e7465cf 322 SUPERFAMILY SSF101801 242 318 5.36E-20 T 13-10-2018 IPR036429 SpoA-like superfamily VEA_003363 391320b4c5b71fb9515e174a8e7465cf 322 SUPERFAMILY SSF101801 166 220 1.31E-6 T 13-10-2018 IPR036429 SpoA-like superfamily VEA_003363 391320b4c5b71fb9515e174a8e7465cf 322 PRINTS PR00956 Flagellar motor switch protein FliN signature 278 291 1.6E-7 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VEA_003363 391320b4c5b71fb9515e174a8e7465cf 322 PRINTS PR00956 Flagellar motor switch protein FliN signature 291 306 1.6E-7 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VEA_003363 391320b4c5b71fb9515e174a8e7465cf 322 PRINTS PR00956 Flagellar motor switch protein FliN signature 245 261 1.6E-7 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VEA_003363 391320b4c5b71fb9515e174a8e7465cf 322 PRINTS PR00956 Flagellar motor switch protein FliN signature 262 278 1.6E-7 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VEA_001599 5a7cf06300caf4f48f6363200a89c425 637 Pfam PF13374 Tetratricopeptide repeat 194 225 0.0032 T 13-10-2018 VEA_001599 5a7cf06300caf4f48f6363200a89c425 637 Gene3D G3DSA:1.25.40.10 226 397 1.9E-14 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_001599 5a7cf06300caf4f48f6363200a89c425 637 SUPERFAMILY SSF48452 194 413 2.81E-20 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_001599 5a7cf06300caf4f48f6363200a89c425 637 SUPERFAMILY SSF55073 477 634 1.49E-39 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_001599 5a7cf06300caf4f48f6363200a89c425 637 SMART SM00267 461 634 3.1E-48 T 13-10-2018 IPR000160 GGDEF domain VEA_001599 5a7cf06300caf4f48f6363200a89c425 637 Pfam PF00990 Diguanylate cyclase, GGDEF domain 473 630 6.0E-37 T 13-10-2018 IPR000160 GGDEF domain VEA_001599 5a7cf06300caf4f48f6363200a89c425 637 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 470 633 2.9E-40 T 13-10-2018 IPR000160 GGDEF domain VEA_001599 5a7cf06300caf4f48f6363200a89c425 637 SUPERFAMILY SSF48452 109 230 1.52E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_001599 5a7cf06300caf4f48f6363200a89c425 637 Gene3D G3DSA:1.25.40.10 114 225 6.5E-11 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_001599 5a7cf06300caf4f48f6363200a89c425 637 Gene3D G3DSA:3.30.70.270 470 637 1.6E-46 T 13-10-2018 VEA_001599 5a7cf06300caf4f48f6363200a89c425 637 SMART SM00028 155 188 170.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_001599 5a7cf06300caf4f48f6363200a89c425 637 SMART SM00028 195 228 18.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_001599 5a7cf06300caf4f48f6363200a89c425 637 SMART SM00028 239 272 33.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_001599 5a7cf06300caf4f48f6363200a89c425 637 SMART SM00028 361 394 430.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_001705 57af1e76aec4e661df5790a5b34d6237 574 Pfam PF03600 Citrate transporter 28 518 9.8E-28 T 13-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 VEA_001705 57af1e76aec4e661df5790a5b34d6237 574 SUPERFAMILY SSF116726 206 283 6.02E-16 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VEA_001705 57af1e76aec4e661df5790a5b34d6237 574 Pfam PF02080 TrkA-C domain 209 276 1.5E-11 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VEA_001705 57af1e76aec4e661df5790a5b34d6237 574 Pfam PF02080 TrkA-C domain 293 349 1.0E-10 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VEA_001705 57af1e76aec4e661df5790a5b34d6237 574 Gene3D G3DSA:3.30.70.1450 289 359 5.7E-11 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VEA_001705 57af1e76aec4e661df5790a5b34d6237 574 Gene3D G3DSA:3.30.70.1450 206 284 7.1E-13 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VEA_001705 57af1e76aec4e661df5790a5b34d6237 574 SUPERFAMILY SSF116726 290 349 1.44E-12 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VEA_000357 42118d8219c5296d78576dce14327d0d 458 Pfam PF01957 NfeD-like C-terminal, partner-binding 314 453 5.0E-35 T 13-10-2018 IPR002810 NfeD-like, C-terminal domain VEA_000357 42118d8219c5296d78576dce14327d0d 458 Gene3D G3DSA:3.90.226.10 16 265 1.1E-61 T 13-10-2018 VEA_000357 42118d8219c5296d78576dce14327d0d 458 SUPERFAMILY SSF141322 386 451 1.23E-8 T 13-10-2018 VEA_000357 42118d8219c5296d78576dce14327d0d 458 Gene3D G3DSA:2.40.50.140 388 458 1.1E-13 T 13-10-2018 VEA_000357 42118d8219c5296d78576dce14327d0d 458 SUPERFAMILY SSF52096 5 215 2.86E-28 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEA_000531 947ecd38221307809f8176460222690f 308 Pfam PF00892 EamA-like transporter family 151 289 1.7E-12 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEA_000531 947ecd38221307809f8176460222690f 308 Pfam PF00892 EamA-like transporter family 3 136 7.9E-8 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEA_000531 947ecd38221307809f8176460222690f 308 SUPERFAMILY SSF103481 184 289 9.94E-10 T 13-10-2018 VEA_000531 947ecd38221307809f8176460222690f 308 SUPERFAMILY SSF103481 39 139 9.15E-10 T 13-10-2018 VEA_000616 87e2ed16cc9d5134e7c586e6d5a80343 345 Gene3D G3DSA:1.10.287.470 103 226 3.2E-12 T 13-10-2018 VEA_000616 87e2ed16cc9d5134e7c586e6d5a80343 345 Gene3D G3DSA:2.40.50.100 72 261 3.2E-12 T 13-10-2018 VEA_000616 87e2ed16cc9d5134e7c586e6d5a80343 345 Pfam PF13437 HlyD family secretion protein 226 297 1.7E-6 T 13-10-2018 VEA_000616 87e2ed16cc9d5134e7c586e6d5a80343 345 Gene3D G3DSA:2.40.30.170 262 299 3.2E-12 T 13-10-2018 VEA_001928 852068864c6af17d90edd4ac8edd8076 510 Pfam PF02646 RmuC family 181 477 1.4E-106 T 13-10-2018 IPR003798 DNA recombination RmuC VEA_002348 e06f999f5276ed408dbc786f06fa0714 219 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 5 219 5.4E-53 T 13-10-2018 IPR026387 Outer membrane protein VEA_002348 e06f999f5276ed408dbc786f06fa0714 219 Pfam PF13505 Outer membrane protein beta-barrel domain 9 219 2.5E-8 T 13-10-2018 IPR027385 Outer membrane protein beta-barrel VEA_002615 5be918938579cb809cff655444d0aede 140 SMART SM00347 23 124 1.0E-11 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEA_002615 5be918938579cb809cff655444d0aede 140 Gene3D G3DSA:1.10.10.10 2 139 3.5E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_002615 5be918938579cb809cff655444d0aede 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 3.7E-12 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEA_002615 5be918938579cb809cff655444d0aede 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 3.7E-12 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEA_002615 5be918938579cb809cff655444d0aede 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 3.7E-12 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEA_002615 5be918938579cb809cff655444d0aede 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 3.7E-12 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEA_002615 5be918938579cb809cff655444d0aede 140 Pfam PF01047 MarR family 31 88 1.3E-12 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEA_002615 5be918938579cb809cff655444d0aede 140 SUPERFAMILY SSF46785 12 137 5.24E-24 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_001332 7bb63008215d417364c86809b886526f 161 Pfam PF03061 Thioesterase superfamily 22 97 8.7E-17 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 VEA_001332 7bb63008215d417364c86809b886526f 161 SUPERFAMILY SSF54637 6 150 2.84E-41 T 13-10-2018 IPR029069 HotDog domain superfamily VEA_001332 7bb63008215d417364c86809b886526f 161 Gene3D G3DSA:3.10.129.10 2 161 2.1E-44 T 13-10-2018 VEA_004097 8a0bc86420637bbf748d350bb2388546 538 Pfam PF00089 Trypsin 34 261 7.6E-60 T 13-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VEA_004097 8a0bc86420637bbf748d350bb2388546 538 SUPERFAMILY SSF50494 26 269 1.43E-69 T 13-10-2018 IPR009003 Peptidase S1, PA clan VEA_004097 8a0bc86420637bbf748d350bb2388546 538 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 214 226 3.5E-15 T 13-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VEA_004097 8a0bc86420637bbf748d350bb2388546 538 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 65 80 3.5E-15 T 13-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VEA_004097 8a0bc86420637bbf748d350bb2388546 538 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 122 136 3.5E-15 T 13-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VEA_004097 8a0bc86420637bbf748d350bb2388546 538 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 215 226 - T 13-10-2018 IPR033116 Serine proteases, trypsin family, serine active site VEA_004097 8a0bc86420637bbf748d350bb2388546 538 Gene3D G3DSA:2.60.40.10 272 386 2.3E-5 T 13-10-2018 IPR013783 Immunoglobulin-like fold VEA_004097 8a0bc86420637bbf748d350bb2388546 538 SMART SM00020 33 266 2.5E-70 T 13-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VEA_004097 8a0bc86420637bbf748d350bb2388546 538 Gene3D G3DSA:2.40.10.10 26 271 2.0E-66 T 13-10-2018 VEA_004097 8a0bc86420637bbf748d350bb2388546 538 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 75 80 - T 13-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 VEA_000117 55b59697794cd135d089e2b9656effb8 251 Pfam PF13531 Bacterial extracellular solute-binding protein 26 249 1.5E-46 T 13-10-2018 VEA_000117 55b59697794cd135d089e2b9656effb8 251 PIRSF PIRSF004846 2 251 2.6E-69 T 13-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 VEA_000117 55b59697794cd135d089e2b9656effb8 251 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 31 248 1.2E-61 T 13-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 VEA_000117 55b59697794cd135d089e2b9656effb8 251 SUPERFAMILY SSF53850 25 250 2.9E-62 T 13-10-2018 VEA_000117 55b59697794cd135d089e2b9656effb8 251 Gene3D G3DSA:3.40.190.10 28 249 9.4E-78 T 13-10-2018 VEA_000117 55b59697794cd135d089e2b9656effb8 251 Gene3D G3DSA:3.40.190.10 104 215 9.4E-78 T 13-10-2018 VEA_002325 5da111cd228e972fa78d5d21ce4ce34d 171 Pfam PF04351 Pilus assembly protein, PilP 25 170 8.9E-43 T 13-10-2018 IPR007446 Pilus assembly protein PilP VEA_002325 5da111cd228e972fa78d5d21ce4ce34d 171 PIRSF PIRSF016481 1 171 2.0E-51 T 13-10-2018 IPR007446 Pilus assembly protein PilP VEA_002325 5da111cd228e972fa78d5d21ce4ce34d 171 Gene3D G3DSA:2.30.30.830 79 171 7.6E-26 T 13-10-2018 VEA_002434 982334c65958a1337fcc49defd20f8c9 427 SUPERFAMILY SSF88713 29 341 1.29E-25 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VEA_002434 982334c65958a1337fcc49defd20f8c9 427 Pfam PF01522 Polysaccharide deacetylase 23 126 2.0E-12 T 13-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 VEA_002434 982334c65958a1337fcc49defd20f8c9 427 SMART SM00495 332 378 2.6E-4 T 13-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VEA_002434 982334c65958a1337fcc49defd20f8c9 427 SMART SM00495 381 427 3.4 T 13-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VEA_002434 982334c65958a1337fcc49defd20f8c9 427 SUPERFAMILY SSF51055 383 426 1.57E-14 T 13-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VEA_002434 982334c65958a1337fcc49defd20f8c9 427 SUPERFAMILY SSF51055 334 377 5.76E-13 T 13-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VEA_002434 982334c65958a1337fcc49defd20f8c9 427 Gene3D G3DSA:2.10.10.90 333 427 1.7E-34 T 13-10-2018 VEA_002434 982334c65958a1337fcc49defd20f8c9 427 Gene3D G3DSA:3.20.20.370 26 332 1.1E-103 T 13-10-2018 VEA_000827 bb3b05e6a94917de42d8e72e430beac4 241 Pfam PF00753 Metallo-beta-lactamase superfamily 2 197 2.5E-17 T 13-10-2018 IPR001279 Metallo-beta-lactamase VEA_000827 bb3b05e6a94917de42d8e72e430beac4 241 SUPERFAMILY SSF56281 1 232 7.21E-37 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEA_000827 bb3b05e6a94917de42d8e72e430beac4 241 SMART SM00849 1 197 8.6E-13 T 13-10-2018 IPR001279 Metallo-beta-lactamase VEA_000827 bb3b05e6a94917de42d8e72e430beac4 241 Gene3D G3DSA:3.60.15.10 1 225 3.7E-32 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEA_002088 57e6e56b4bb4ce3adde897e604dd0f2b 588 Gene3D G3DSA:3.60.20.40 410 588 3.6E-60 T 13-10-2018 VEA_002088 57e6e56b4bb4ce3adde897e604dd0f2b 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 409 427 4.0E-66 T 13-10-2018 VEA_002088 57e6e56b4bb4ce3adde897e604dd0f2b 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 300 319 4.0E-66 T 13-10-2018 VEA_002088 57e6e56b4bb4ce3adde897e604dd0f2b 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 270 286 4.0E-66 T 13-10-2018 VEA_002088 57e6e56b4bb4ce3adde897e604dd0f2b 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 150 168 4.0E-66 T 13-10-2018 VEA_002088 57e6e56b4bb4ce3adde897e604dd0f2b 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 431 449 4.0E-66 T 13-10-2018 VEA_002088 57e6e56b4bb4ce3adde897e604dd0f2b 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 75 100 4.0E-66 T 13-10-2018 VEA_002088 57e6e56b4bb4ce3adde897e604dd0f2b 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 168 187 4.0E-66 T 13-10-2018 VEA_002088 57e6e56b4bb4ce3adde897e604dd0f2b 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 467 482 4.0E-66 T 13-10-2018 VEA_002088 57e6e56b4bb4ce3adde897e604dd0f2b 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 491 508 4.0E-66 T 13-10-2018 VEA_002088 57e6e56b4bb4ce3adde897e604dd0f2b 588 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 54 580 6.4E-141 T 13-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 VEA_002088 57e6e56b4bb4ce3adde897e604dd0f2b 588 Gene3D G3DSA:1.10.246.130 286 409 1.4E-38 T 13-10-2018 VEA_002088 57e6e56b4bb4ce3adde897e604dd0f2b 588 Pfam PF01019 Gamma-glutamyltranspeptidase 68 583 6.1E-163 T 13-10-2018 VEA_002088 57e6e56b4bb4ce3adde897e604dd0f2b 588 SUPERFAMILY SSF56235 45 587 1.7E-175 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VEA_002714 ee5fee26a6b30fea8604031a92ee8701 77 Pfam PF04400 (Na+)-NQR maturation NqrM 22 63 1.7E-21 T 13-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM VEA_001299 a96af908c11748c951fa6c0760adb2bd 216 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 181 1.8E-33 T 13-10-2018 VEA_001299 a96af908c11748c951fa6c0760adb2bd 216 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 78 182 5.6E-18 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEA_001299 a96af908c11748c951fa6c0760adb2bd 216 Gene3D G3DSA:1.10.150.240 16 84 1.9E-51 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VEA_001299 a96af908c11748c951fa6c0760adb2bd 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 5.4E-12 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEA_001299 a96af908c11748c951fa6c0760adb2bd 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 5.4E-12 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEA_001299 a96af908c11748c951fa6c0760adb2bd 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 5.4E-12 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEA_001299 a96af908c11748c951fa6c0760adb2bd 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 5.4E-12 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEA_001299 a96af908c11748c951fa6c0760adb2bd 216 SUPERFAMILY SSF56784 1 213 1.82E-53 T 13-10-2018 IPR036412 HAD-like superfamily VEA_001299 a96af908c11748c951fa6c0760adb2bd 216 Gene3D G3DSA:3.40.50.1000 4 192 1.9E-51 T 13-10-2018 IPR023214 HAD superfamily VEA_000218 434d82edd5e8f8b072cd5523499328fc 272 Gene3D G3DSA:3.20.20.450 22 271 5.5E-46 T 13-10-2018 IPR035919 EAL domain superfamily VEA_000218 434d82edd5e8f8b072cd5523499328fc 272 Pfam PF00563 EAL domain 27 255 7.4E-42 T 13-10-2018 IPR001633 EAL domain VEA_000218 434d82edd5e8f8b072cd5523499328fc 272 SMART SM00052 13 260 3.1E-12 T 13-10-2018 IPR001633 EAL domain VEA_000218 434d82edd5e8f8b072cd5523499328fc 272 SUPERFAMILY SSF141868 25 263 1.02E-48 T 13-10-2018 IPR035919 EAL domain superfamily VEA_003447 24eb0fa118e82f6381b9ee17c4c60d2e 107 Gene3D G3DSA:3.30.1150.10 14 99 4.6E-7 T 13-10-2018 VEA_003621 115beb6d7138c453a6b279f6baa47a85 121 PIRSF PIRSF039020 1 121 6.7E-43 T 13-10-2018 IPR026275 Glyoxalase/dioxygenase/EhpR VEA_003621 115beb6d7138c453a6b279f6baa47a85 121 Gene3D G3DSA:3.10.180.10 1 120 1.5E-39 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEA_003621 115beb6d7138c453a6b279f6baa47a85 121 SUPERFAMILY SSF54593 3 118 4.79E-18 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEA_003621 115beb6d7138c453a6b279f6baa47a85 121 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 115 1.0E-5 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VEA_000239 289490c4f1419473c4ec9976353be1ea 86 Gene3D G3DSA:1.20.120.1930 1 86 2.8E-38 T 13-10-2018 VEA_000239 289490c4f1419473c4ec9976353be1ea 86 Pfam PF16691 Domain of unknown function (DUF5062) 6 86 1.8E-30 T 13-10-2018 IPR032036 Protein of unknown function DUF5062 VEA_000067 1a88182f1d2113ad8a44736b0790abb9 135 Pfam PF14760 Rnk N-terminus 6 43 4.2E-12 T 13-10-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain VEA_000067 1a88182f1d2113ad8a44736b0790abb9 135 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 125 1.6E-17 T 13-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VEA_000067 1a88182f1d2113ad8a44736b0790abb9 135 Gene3D G3DSA:3.10.50.30 45 135 2.7E-26 T 13-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 VEA_000067 1a88182f1d2113ad8a44736b0790abb9 135 SUPERFAMILY SSF54534 49 126 3.4E-17 T 13-10-2018 VEA_000067 1a88182f1d2113ad8a44736b0790abb9 135 PIRSF PIRSF006092 22 127 3.4E-30 T 13-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 VEA_000067 1a88182f1d2113ad8a44736b0790abb9 135 PIRSF PIRSF006092 1 27 41.0 T 13-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 VEA_001604 d96f739be0e6585fcf15aa312245945b 317 Gene3D G3DSA:3.40.1030.10 72 312 1.4E-42 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEA_001604 d96f739be0e6585fcf15aa312245945b 317 Pfam PF02885 Glycosyl transferase family, helical bundle domain 11 68 7.0E-11 T 13-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEA_001604 d96f739be0e6585fcf15aa312245945b 317 Gene3D G3DSA:1.20.970.10 3 71 9.2E-16 T 13-10-2018 VEA_001604 d96f739be0e6585fcf15aa312245945b 317 SUPERFAMILY SSF52418 73 312 7.38E-44 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEA_001604 d96f739be0e6585fcf15aa312245945b 317 Pfam PF00591 Glycosyl transferase family, a/b domain 97 253 2.0E-5 T 13-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEA_001604 d96f739be0e6585fcf15aa312245945b 317 SUPERFAMILY SSF47648 8 72 6.41E-15 T 13-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEA_004084 b0b043ab09d2fb06bcfca0ab7dc9fc58 323 Gene3D G3DSA:1.10.8.350 35 199 1.3E-92 T 13-10-2018 VEA_004084 b0b043ab09d2fb06bcfca0ab7dc9fc58 323 SUPERFAMILY SSF53955 12 322 1.0E-100 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily VEA_004084 b0b043ab09d2fb06bcfca0ab7dc9fc58 323 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 24 322 6.3E-112 T 13-10-2018 IPR011970 Lytic murein transglycosylase VEA_004084 b0b043ab09d2fb06bcfca0ab7dc9fc58 323 Pfam PF13406 Transglycosylase SLT domain 24 319 2.2E-110 T 13-10-2018 IPR031304 Transglycosylase SLT domain 2 VEA_004084 b0b043ab09d2fb06bcfca0ab7dc9fc58 323 Gene3D G3DSA:1.10.530.10 66 318 1.3E-92 T 13-10-2018 VEA_000693 c663dc8a4dba54bc4658c885b6bf6374 215 SUPERFAMILY SSF103481 2 59 1.03E-10 T 13-10-2018 VEA_000693 c663dc8a4dba54bc4658c885b6bf6374 215 Pfam PF00892 EamA-like transporter family 2 55 1.0E-6 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEA_000693 c663dc8a4dba54bc4658c885b6bf6374 215 SUPERFAMILY SSF103481 99 198 2.09E-10 T 13-10-2018 VEA_004322 068b163595e9181733df88da76fc6f39 443 Gene3D G3DSA:3.40.640.10 48 326 1.5E-149 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_004322 068b163595e9181733df88da76fc6f39 443 Gene3D G3DSA:3.90.1150.10 15 434 1.5E-149 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEA_004322 068b163595e9181733df88da76fc6f39 443 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 274 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEA_004322 068b163595e9181733df88da76fc6f39 443 SUPERFAMILY SSF53383 7 437 5.06E-121 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_004322 068b163595e9181733df88da76fc6f39 443 Pfam PF00202 Aminotransferase class-III 11 434 2.3E-105 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEA_004322 068b163595e9181733df88da76fc6f39 443 PIRSF PIRSF000521 1 438 8.1E-33 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VEA_003225 9dfbd178e0e166b23912b160e4c220be 142 Pfam PF13302 Acetyltransferase (GNAT) domain 2 132 4.1E-24 T 13-10-2018 IPR000182 GNAT domain VEA_003225 9dfbd178e0e166b23912b160e4c220be 142 SUPERFAMILY SSF55729 2 133 2.57E-31 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_003225 9dfbd178e0e166b23912b160e4c220be 142 Gene3D G3DSA:3.40.630.30 1 140 8.5E-31 T 13-10-2018 VEA_001407 33a311d81e2c33ea0b1609d84387b3e0 177 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 40 175 4.5E-38 T 13-10-2018 IPR005247 YbhB/YbcL VEA_001407 33a311d81e2c33ea0b1609d84387b3e0 177 SUPERFAMILY SSF49777 22 177 5.76E-47 T 13-10-2018 IPR036610 PEBP-like superfamily VEA_001407 33a311d81e2c33ea0b1609d84387b3e0 177 Pfam PF01161 Phosphatidylethanolamine-binding protein 41 175 1.8E-34 T 13-10-2018 IPR008914 Phosphatidylethanolamine-binding protein VEA_001407 33a311d81e2c33ea0b1609d84387b3e0 177 Gene3D G3DSA:3.90.280.10 12 177 6.4E-51 T 13-10-2018 IPR036610 PEBP-like superfamily VEA_000325 db34ed60bab52a3ef351b2b891047f55 81 Gene3D G3DSA:1.20.1280.290 26 76 1.4E-6 T 13-10-2018 VEA_000325 db34ed60bab52a3ef351b2b891047f55 81 ProDom PD058023 TRANSMEMBRANE SO1069 MEMBRANE VCA0743 SO4196 VVA0623 VPA0666 HI1736 PM0424 3 73 7.0E-33 T 13-10-2018 IPR020137 Uncharacterised protein family HI1736 VEA_000325 db34ed60bab52a3ef351b2b891047f55 81 Pfam PF10688 Bacterial inner membrane protein 4 73 1.7E-9 T 13-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV VEA_001470 bb3d1196d785c92e15ad2cecff82c950 206 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 91 165 9.1E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEA_001470 bb3d1196d785c92e15ad2cecff82c950 206 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 13 172 2.7E-10 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEA_001470 bb3d1196d785c92e15ad2cecff82c950 206 Gene3D G3DSA:3.40.50.1000 12 187 4.9E-52 T 13-10-2018 IPR023214 HAD superfamily VEA_001470 bb3d1196d785c92e15ad2cecff82c950 206 Pfam PF13419 Haloacid dehalogenase-like hydrolase 14 171 4.1E-16 T 13-10-2018 VEA_001470 bb3d1196d785c92e15ad2cecff82c950 206 Gene3D G3DSA:1.10.260.80 24 75 4.9E-52 T 13-10-2018 VEA_001470 bb3d1196d785c92e15ad2cecff82c950 206 SUPERFAMILY SSF56784 11 198 1.1E-31 T 13-10-2018 IPR036412 HAD-like superfamily VEA_001436 425007b3adc68b9baef3bda17c6a90f7 323 Gene3D G3DSA:2.40.160.10 22 323 2.5E-61 T 13-10-2018 IPR023614 Porin domain superfamily VEA_001436 425007b3adc68b9baef3bda17c6a90f7 323 Pfam PF13609 Gram-negative porin 11 293 9.5E-27 T 13-10-2018 VEA_001436 425007b3adc68b9baef3bda17c6a90f7 323 SUPERFAMILY SSF56935 22 323 1.83E-50 T 13-10-2018 VEA_004218 30dce38436e89a4508b08ae20c4b0d38 179 Pfam PF04390 Lipopolysaccharide-assembly 40 159 1.9E-12 T 13-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 VEA_004218 30dce38436e89a4508b08ae20c4b0d38 179 Gene3D G3DSA:3.30.160.150 19 168 4.4E-49 T 13-10-2018 VEA_004218 30dce38436e89a4508b08ae20c4b0d38 179 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 7 164 23.798 T 13-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 VEA_002862 a66ca3760e4c9c5f25ef4c2f54ccfcf0 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 303 1.3E-97 T 13-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 VEA_002862 a66ca3760e4c9c5f25ef4c2f54ccfcf0 310 PIRSF PIRSF037167 2 307 1.7E-150 T 13-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 VEA_002862 a66ca3760e4c9c5f25ef4c2f54ccfcf0 310 Gene3D G3DSA:1.10.8.10 16 106 1.2E-5 T 13-10-2018 VEA_002862 a66ca3760e4c9c5f25ef4c2f54ccfcf0 310 Pfam PF05175 Methyltransferase small domain 134 216 6.5E-18 T 13-10-2018 IPR007848 Methyltransferase small domain GO:0008168 VEA_002862 a66ca3760e4c9c5f25ef4c2f54ccfcf0 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VEA_002862 a66ca3760e4c9c5f25ef4c2f54ccfcf0 310 Gene3D G3DSA:3.40.50.150 109 283 3.1E-46 T 13-10-2018 VEA_002862 a66ca3760e4c9c5f25ef4c2f54ccfcf0 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 54.26 T 13-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 VEA_002862 a66ca3760e4c9c5f25ef4c2f54ccfcf0 310 SUPERFAMILY SSF53335 16 294 1.64E-50 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_002862 a66ca3760e4c9c5f25ef4c2f54ccfcf0 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 5.8E-139 T 13-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 VEA_003575 a9b4e2bbcc42c8198c4cedee669b6ea6 421 SMART SM00471 245 380 7.7E-12 T 13-10-2018 IPR003607 HD/PDEase domain VEA_003575 a9b4e2bbcc42c8198c4cedee669b6ea6 421 SMART SM00471 31 160 2.3 T 13-10-2018 IPR003607 HD/PDEase domain VEA_003575 a9b4e2bbcc42c8198c4cedee669b6ea6 421 SUPERFAMILY SSF109604 26 194 5.09E-18 T 13-10-2018 VEA_003575 a9b4e2bbcc42c8198c4cedee669b6ea6 421 TIGRFAM TIGR00277 HDIG: HDIG domain 249 339 1.3E-8 T 13-10-2018 IPR006675 HDIG domain VEA_003575 a9b4e2bbcc42c8198c4cedee669b6ea6 421 SUPERFAMILY SSF109604 241 398 8.83E-34 T 13-10-2018 VEA_003575 a9b4e2bbcc42c8198c4cedee669b6ea6 421 Gene3D G3DSA:1.10.3210.10 20 199 1.1E-21 T 13-10-2018 VEA_003575 a9b4e2bbcc42c8198c4cedee669b6ea6 421 Gene3D G3DSA:1.10.3210.10 236 420 1.9E-51 T 13-10-2018 VEA_003575 a9b4e2bbcc42c8198c4cedee669b6ea6 421 Pfam PF01966 HD domain 37 128 2.3E-5 T 13-10-2018 IPR006674 HD domain VEA_003575 a9b4e2bbcc42c8198c4cedee669b6ea6 421 Pfam PF01966 HD domain 249 370 2.1E-19 T 13-10-2018 IPR006674 HD domain VEA_001019 97ae03ccc59b7a7f787887cd6a1cfcbf 497 Pfam PF00474 Sodium:solute symporter family 36 437 3.1E-105 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VEA_001019 97ae03ccc59b7a7f787887cd6a1cfcbf 497 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 437 9.4E-95 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VEA_001019 97ae03ccc59b7a7f787887cd6a1cfcbf 497 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 7 488 2.8E-215 T 13-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 VEA_001019 97ae03ccc59b7a7f787887cd6a1cfcbf 497 Gene3D G3DSA:1.20.1730.10 12 495 8.7E-96 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily VEA_004321 22a660c4188cfff0ca5217a950da5eb7 279 Gene3D G3DSA:3.20.20.70 4 279 2.5E-59 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_004321 22a660c4188cfff0ca5217a950da5eb7 279 Pfam PF05853 beta-keto acid cleavage enzyme 11 278 1.7E-58 T 13-10-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247 VEA_003971 eaf7fc0e951ad8962f8c97edee703ceb 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 73 1.1E-15 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VEA_003971 eaf7fc0e951ad8962f8c97edee703ceb 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 241 2.5E-21 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_003971 eaf7fc0e951ad8962f8c97edee703ceb 246 Gene3D G3DSA:1.10.3720.10 3 243 2.7E-49 T 13-10-2018 IPR035906 MetI-like superfamily VEA_003971 eaf7fc0e951ad8962f8c97edee703ceb 246 SUPERFAMILY SSF161098 11 233 9.68E-40 T 13-10-2018 IPR035906 MetI-like superfamily VEA_004199 4f29f8687512816acb1740ba841ce3d6 283 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 48.193 T 13-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VEA_004199 4f29f8687512816acb1740ba841ce3d6 283 SUPERFAMILY SSF51569 2 278 3.94E-104 T 13-10-2018 VEA_004199 4f29f8687512816acb1740ba841ce3d6 283 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 6.0E-116 T 13-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VEA_004199 4f29f8687512816acb1740ba841ce3d6 283 Pfam PF00793 DAHP synthetase I family 10 275 6.0E-70 T 13-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VEA_004199 4f29f8687512816acb1740ba841ce3d6 283 Gene3D G3DSA:3.20.20.70 1 283 2.0E-101 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_000799 de33e4bdcdf9f24fc744d82146b5eef4 467 Pfam PF12268 Protein of unknown function (DUF3612) 276 450 6.7E-106 T 13-10-2018 IPR022055 Protein of unknown function DUF3612 VEA_000799 de33e4bdcdf9f24fc744d82146b5eef4 467 Pfam PF06114 IrrE N-terminal-like domain 143 275 1.0E-5 T 13-10-2018 IPR010359 IrrE N-terminal-like domain VEA_004401 080b36de0057e47db569c46d1e6a8477 645 SUPERFAMILY SSF48435 30 478 1.7E-129 T 13-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 VEA_004401 080b36de0057e47db569c46d1e6a8477 645 Gene3D G3DSA:1.10.530.10 474 645 2.3E-49 T 13-10-2018 VEA_004401 080b36de0057e47db569c46d1e6a8477 645 Gene3D G3DSA:1.10.1240.20 406 473 3.2E-20 T 13-10-2018 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily GO:0004553|GO:0042597 VEA_004401 080b36de0057e47db569c46d1e6a8477 645 Pfam PF01464 Transglycosylase SLT domain 486 597 2.9E-29 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 VEA_004401 080b36de0057e47db569c46d1e6a8477 645 Gene3D G3DSA:1.25.20.10 30 391 2.0E-100 T 13-10-2018 VEA_004401 080b36de0057e47db569c46d1e6a8477 645 SUPERFAMILY SSF53955 481 640 6.33E-48 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily VEA_004401 080b36de0057e47db569c46d1e6a8477 645 Pfam PF14718 Soluble lytic murein transglycosylase L domain 408 473 2.2E-23 T 13-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 VEA_004314 e53a5237355ed6f391978457aee86596 379 Gene3D G3DSA:3.40.50.1820 44 273 1.6E-36 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_004314 e53a5237355ed6f391978457aee86596 379 SUPERFAMILY SSF53474 73 227 1.86E-29 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_004314 e53a5237355ed6f391978457aee86596 379 Pfam PF01764 Lipase (class 3) 76 205 8.9E-20 T 13-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 VEA_001622 f92a7efee52748b26bff24a08cfdb291 147 Gene3D G3DSA:1.10.1510.10 1 90 4.5E-28 T 13-10-2018 VEA_001622 f92a7efee52748b26bff24a08cfdb291 147 Pfam PF09424 Yqey-like protein 5 146 3.7E-58 T 13-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 VEA_001622 f92a7efee52748b26bff24a08cfdb291 147 Gene3D G3DSA:1.10.10.410 91 147 1.3E-20 T 13-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal VEA_001622 f92a7efee52748b26bff24a08cfdb291 147 SUPERFAMILY SSF89095 1 146 3.19E-45 T 13-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 VEA_001608 2c85f6ca4f70c06005b4d37abba7bc85 321 Gene3D G3DSA:1.10.3720.10 104 307 5.9E-23 T 13-10-2018 IPR035906 MetI-like superfamily VEA_001608 2c85f6ca4f70c06005b4d37abba7bc85 321 SUPERFAMILY SSF161098 105 302 3.27E-25 T 13-10-2018 IPR035906 MetI-like superfamily VEA_001608 2c85f6ca4f70c06005b4d37abba7bc85 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 129 299 4.2E-22 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_003794 a1db669bb23d4bb5a34497380559730f 569 Gene3D G3DSA:1.10.3720.10 296 549 2.2E-19 T 13-10-2018 IPR035906 MetI-like superfamily VEA_003794 a1db669bb23d4bb5a34497380559730f 569 Gene3D G3DSA:1.10.3720.10 3 279 1.6E-18 T 13-10-2018 IPR035906 MetI-like superfamily VEA_003794 a1db669bb23d4bb5a34497380559730f 569 SUPERFAMILY SSF161098 5 276 5.12E-24 T 13-10-2018 IPR035906 MetI-like superfamily VEA_003794 a1db669bb23d4bb5a34497380559730f 569 SUPERFAMILY SSF161098 301 541 2.62E-25 T 13-10-2018 IPR035906 MetI-like superfamily VEA_001041 15e71bbd357c3db97e57b4993b92759f 179 SUPERFAMILY SSF55797 42 176 7.19E-21 T 13-10-2018 IPR035940 CAP superfamily VEA_001041 15e71bbd357c3db97e57b4993b92759f 179 Gene3D G3DSA:3.40.33.10 19 177 7.3E-44 T 13-10-2018 IPR035940 CAP superfamily VEA_001041 15e71bbd357c3db97e57b4993b92759f 179 Pfam PF00188 Cysteine-rich secretory protein family 48 175 2.6E-19 T 13-10-2018 IPR014044 CAP domain VEA_002743 f9d8d45de22678b548b62f4c7a8c6172 127 Pfam PF11944 Protein of unknown function (DUF3461) 1 126 1.2E-56 T 13-10-2018 IPR020911 Uncharacterised protein family UPF0325 VEA_002743 f9d8d45de22678b548b62f4c7a8c6172 127 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 127 31.359 T 13-10-2018 IPR020911 Uncharacterised protein family UPF0325 VEA_002743 f9d8d45de22678b548b62f4c7a8c6172 127 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 126 9.0E-64 T 13-10-2018 IPR020911 Uncharacterised protein family UPF0325 VEA_002837 db30eae83d75fb824c85f6d88a11bef8 259 Pfam PF13614 AAA domain 4 174 1.0E-49 T 13-10-2018 IPR025669 AAA domain VEA_002837 db30eae83d75fb824c85f6d88a11bef8 259 SUPERFAMILY SSF52540 1 252 1.18E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002837 db30eae83d75fb824c85f6d88a11bef8 259 Gene3D G3DSA:3.40.50.300 1 254 3.0E-65 T 13-10-2018 VEA_002215 addf4a5bd1d153c5468e1628ee99c600 172 Pfam PF04186 FxsA cytoplasmic membrane protein 7 114 9.3E-35 T 13-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 VEA_001726 e4318056a94dd77234c2a3881dd8072a 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 5.9E-43 T 13-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VEA_001726 e4318056a94dd77234c2a3881dd8072a 117 SUPERFAMILY SSF53137 3 115 3.49E-51 T 13-10-2018 VEA_001726 e4318056a94dd77234c2a3881dd8072a 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 25.638 T 13-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_001726 e4318056a94dd77234c2a3881dd8072a 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 9.3E-44 T 13-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_001726 e4318056a94dd77234c2a3881dd8072a 117 Gene3D G3DSA:3.30.420.100 1 117 4.8E-44 T 13-10-2018 VEA_002642 15bba7477532500460bc5f79b5094422 437 SMART SM00382 166 357 0.0079 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_002642 15bba7477532500460bc5f79b5094422 437 Gene3D G3DSA:3.40.50.300 135 352 3.3E-9 T 13-10-2018 VEA_002642 15bba7477532500460bc5f79b5094422 437 SUPERFAMILY SSF52540 147 394 2.66E-17 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000003 82b2ce20cbad650bfc71e689ce05d46b 134 SUPERFAMILY SSF117856 4 131 1.7E-36 T 13-10-2018 VEA_000003 82b2ce20cbad650bfc71e689ce05d46b 134 Gene3D G3DSA:3.30.1330.80 2 134 1.8E-47 T 13-10-2018 VEA_000003 82b2ce20cbad650bfc71e689ce05d46b 134 Pfam PF03479 Domain of unknown function (DUF296) 5 110 1.2E-22 T 13-10-2018 IPR005175 PPC domain VEA_002020 4e7c4981361cfe5ba4e665e834e09bb7 211 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 16 205 28.678 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VEA_002020 4e7c4981361cfe5ba4e665e834e09bb7 211 Gene3D G3DSA:3.40.50.150 4 210 1.4E-68 T 13-10-2018 VEA_002020 4e7c4981361cfe5ba4e665e834e09bb7 211 PIRSF PIRSF003078 2 211 1.1E-58 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VEA_002020 4e7c4981361cfe5ba4e665e834e09bb7 211 Pfam PF02527 rRNA small subunit methyltransferase G 23 204 4.4E-63 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VEA_002020 4e7c4981361cfe5ba4e665e834e09bb7 211 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 29 207 1.5E-57 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VEA_002020 4e7c4981361cfe5ba4e665e834e09bb7 211 SUPERFAMILY SSF53335 8 209 1.81E-40 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_000269 f1b1c4bcebdbf5137c6c73fc4891212b 470 Pfam PF00171 Aldehyde dehydrogenase family 30 440 3.4E-95 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VEA_000269 f1b1c4bcebdbf5137c6c73fc4891212b 470 Gene3D G3DSA:3.40.309.10 221 420 1.1E-156 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VEA_000269 f1b1c4bcebdbf5137c6c73fc4891212b 470 PIRSF PIRSF036492 2 469 2.3E-161 T 13-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 VEA_000269 f1b1c4bcebdbf5137c6c73fc4891212b 470 SUPERFAMILY SSF53720 14 441 1.2E-120 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VEA_000269 f1b1c4bcebdbf5137c6c73fc4891212b 470 Gene3D G3DSA:3.40.605.10 22 440 1.1E-156 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VEA_000269 f1b1c4bcebdbf5137c6c73fc4891212b 470 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 217 224 - T 13-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VEA_002849 a0efa814ffaee351deb73e84bea314f6 404 Pfam PF14559 Tetratricopeptide repeat 176 244 3.1E-8 T 13-10-2018 VEA_002849 a0efa814ffaee351deb73e84bea314f6 404 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 3 115 6.3E-31 T 13-10-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI VEA_002849 a0efa814ffaee351deb73e84bea314f6 404 SUPERFAMILY SSF48452 161 265 9.8E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_002849 a0efa814ffaee351deb73e84bea314f6 404 Gene3D G3DSA:1.25.40.10 153 293 7.3E-16 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_001284 279c156c476d7683432790e4fa13f519 701 Pfam PF00593 TonB dependent receptor 237 700 2.3E-62 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VEA_001284 279c156c476d7683432790e4fa13f519 701 Gene3D G3DSA:2.40.170.20 171 701 4.7E-131 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VEA_001284 279c156c476d7683432790e4fa13f519 701 Pfam PF07715 TonB-dependent Receptor Plug Domain 61 160 6.9E-17 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain VEA_001284 279c156c476d7683432790e4fa13f519 701 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 62 700 5.8E-106 T 13-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 VEA_001284 279c156c476d7683432790e4fa13f519 701 Gene3D G3DSA:2.170.130.10 38 170 1.3E-31 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VEA_001284 279c156c476d7683432790e4fa13f519 701 SUPERFAMILY SSF56935 37 701 1.24E-132 T 13-10-2018 VEA_001284 279c156c476d7683432790e4fa13f519 701 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 52 - T 13-10-2018 IPR010916 TonB box, conserved site VEA_002769 e0099f4505b9c61d10a601efb0a17963 527 Gene3D G3DSA:1.10.530.10 110 262 1.6E-28 T 13-10-2018 VEA_002769 e0099f4505b9c61d10a601efb0a17963 527 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 134 162 - T 13-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VEA_002769 e0099f4505b9c61d10a601efb0a17963 527 Gene3D G3DSA:3.10.350.10 341 395 1.5E-15 T 13-10-2018 IPR036779 LysM domain superfamily VEA_002769 e0099f4505b9c61d10a601efb0a17963 527 SUPERFAMILY SSF54106 417 462 3.92E-11 T 13-10-2018 VEA_002769 e0099f4505b9c61d10a601efb0a17963 527 SUPERFAMILY SSF54106 473 520 3.27E-10 T 13-10-2018 VEA_002769 e0099f4505b9c61d10a601efb0a17963 527 SUPERFAMILY SSF53955 113 271 4.31E-41 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily VEA_002769 e0099f4505b9c61d10a601efb0a17963 527 Pfam PF01464 Transglycosylase SLT domain 126 227 2.5E-22 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 VEA_002769 e0099f4505b9c61d10a601efb0a17963 527 Pfam PF01476 LysM domain 345 387 5.0E-13 T 13-10-2018 IPR018392 LysM domain VEA_002769 e0099f4505b9c61d10a601efb0a17963 527 Pfam PF01476 LysM domain 476 518 1.5E-10 T 13-10-2018 IPR018392 LysM domain VEA_002769 e0099f4505b9c61d10a601efb0a17963 527 Pfam PF01476 LysM domain 419 462 8.3E-12 T 13-10-2018 IPR018392 LysM domain VEA_002769 e0099f4505b9c61d10a601efb0a17963 527 Gene3D G3DSA:3.10.350.10 473 521 1.5E-13 T 13-10-2018 IPR036779 LysM domain superfamily VEA_002769 e0099f4505b9c61d10a601efb0a17963 527 Gene3D G3DSA:3.10.350.10 402 471 4.5E-15 T 13-10-2018 IPR036779 LysM domain superfamily VEA_002769 e0099f4505b9c61d10a601efb0a17963 527 SUPERFAMILY SSF54106 344 387 5.62E-11 T 13-10-2018 VEA_002769 e0099f4505b9c61d10a601efb0a17963 527 SMART SM00257 418 462 7.8E-12 T 13-10-2018 IPR018392 LysM domain VEA_002769 e0099f4505b9c61d10a601efb0a17963 527 SMART SM00257 475 519 4.5E-10 T 13-10-2018 IPR018392 LysM domain VEA_002769 e0099f4505b9c61d10a601efb0a17963 527 SMART SM00257 344 387 4.5E-15 T 13-10-2018 IPR018392 LysM domain VEA_002672 964a1a7aa8f5cd82384f8c56760e2302 317 SUPERFAMILY SSF143865 3 236 2.88E-25 T 13-10-2018 VEA_002672 964a1a7aa8f5cd82384f8c56760e2302 317 Gene3D G3DSA:1.20.58.340 252 308 2.6E-10 T 13-10-2018 VEA_002672 964a1a7aa8f5cd82384f8c56760e2302 317 Gene3D G3DSA:3.30.460.20 1 124 4.7E-45 T 13-10-2018 VEA_002672 964a1a7aa8f5cd82384f8c56760e2302 317 Pfam PF01544 CorA-like Mg2+ transporter protein 30 305 7.8E-46 T 13-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 VEA_002672 964a1a7aa8f5cd82384f8c56760e2302 317 Gene3D G3DSA:1.20.58.340 125 249 1.9E-28 T 13-10-2018 VEA_002672 964a1a7aa8f5cd82384f8c56760e2302 317 SUPERFAMILY SSF144083 245 306 3.79E-14 T 13-10-2018 VEA_002621 9789fd5b643a468e950025ddceaab885 167 Pfam PF13527 Acetyltransferase (GNAT) domain 3 123 1.1E-9 T 13-10-2018 VEA_002621 9789fd5b643a468e950025ddceaab885 167 SUPERFAMILY SSF55729 1 130 2.36E-27 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_002621 9789fd5b643a468e950025ddceaab885 167 Gene3D G3DSA:3.40.630.30 1 167 1.1E-45 T 13-10-2018 VEA_000862 3abbcf6e950348ea0149df633421da3f 461 SUPERFAMILY SSF111283 5 459 1.09E-112 T 13-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 VEA_000862 3abbcf6e950348ea0149df633421da3f 461 PIRSF PIRSF004919 1 461 1.2E-114 T 13-10-2018 IPR025502 TldD VEA_000862 3abbcf6e950348ea0149df633421da3f 461 Pfam PF01523 Putative modulator of DNA gyrase 21 314 3.0E-60 T 13-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 VEA_000862 3abbcf6e950348ea0149df633421da3f 461 Gene3D G3DSA:3.30.2290.10 2 221 7.1E-18 T 13-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal VEA_001646 5161e50402a65ac035ce5b2822be3817 214 SUPERFAMILY SSF48008 62 202 2.88E-5 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VEA_001646 5161e50402a65ac035ce5b2822be3817 214 Pfam PF00392 Bacterial regulatory proteins, gntR family 2 56 2.9E-14 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_001646 5161e50402a65ac035ce5b2822be3817 214 Gene3D G3DSA:1.10.10.10 1 57 2.3E-13 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001646 5161e50402a65ac035ce5b2822be3817 214 SUPERFAMILY SSF46785 2 64 5.25E-12 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_001646 5161e50402a65ac035ce5b2822be3817 214 SMART SM00345 1 56 3.6E-7 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_001646 5161e50402a65ac035ce5b2822be3817 214 Gene3D G3DSA:1.20.120.530 60 208 2.5E-6 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VEA_001029 9ecec83530732b6d45636368140c1908 307 Gene3D G3DSA:1.10.10.60 199 303 8.2E-24 T 13-10-2018 VEA_001029 9ecec83530732b6d45636368140c1908 307 SMART SM00342 216 299 2.1E-19 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_001029 9ecec83530732b6d45636368140c1908 307 Pfam PF12833 Helix-turn-helix domain 222 297 2.2E-16 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_001029 9ecec83530732b6d45636368140c1908 307 Pfam PF06719 AraC-type transcriptional regulator N-terminus 37 187 5.5E-49 T 13-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal VEA_001029 9ecec83530732b6d45636368140c1908 307 SUPERFAMILY SSF46689 199 250 1.47E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_001029 9ecec83530732b6d45636368140c1908 307 SUPERFAMILY SSF46689 252 301 3.85E-7 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_003088 df211312f5974e06dc286e5173b44e44 525 Gene3D G3DSA:3.60.120.10 8 522 1.3E-185 T 13-10-2018 IPR005801 ADC synthase GO:0009058 VEA_003088 df211312f5974e06dc286e5173b44e44 525 SUPERFAMILY SSF56322 13 517 8.37E-158 T 13-10-2018 IPR005801 ADC synthase GO:0009058 VEA_003088 df211312f5974e06dc286e5173b44e44 525 Pfam PF00425 chorismate binding enzyme 246 506 2.1E-84 T 13-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal VEA_003088 df211312f5974e06dc286e5173b44e44 525 Pfam PF04715 Anthranilate synthase component I, N terminal region 24 197 5.8E-14 T 13-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VEA_003088 df211312f5974e06dc286e5173b44e44 525 PIRSF PIRSF001373 3 525 6.2E-261 T 13-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VEA_003088 df211312f5974e06dc286e5173b44e44 525 PRINTS PR00095 Anthranilate synthase component I signature 368 381 1.3E-22 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VEA_003088 df211312f5974e06dc286e5173b44e44 525 PRINTS PR00095 Anthranilate synthase component I signature 463 477 1.3E-22 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VEA_003088 df211312f5974e06dc286e5173b44e44 525 PRINTS PR00095 Anthranilate synthase component I signature 448 462 1.3E-22 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VEA_003088 df211312f5974e06dc286e5173b44e44 525 PRINTS PR00095 Anthranilate synthase component I signature 354 367 1.3E-22 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VEA_003088 df211312f5974e06dc286e5173b44e44 525 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 22 518 1.1E-225 T 13-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VEA_002296 5a2f108dc96774787bbf8177ff124b13 61 Pfam PF04077 DsrH like protein 1 56 5.3E-15 T 13-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 VEA_002296 5a2f108dc96774787bbf8177ff124b13 61 Gene3D G3DSA:3.40.1260.10 1 60 1.2E-15 T 13-10-2018 IPR027396 DsrEFH-like VEA_002296 5a2f108dc96774787bbf8177ff124b13 61 SUPERFAMILY SSF75169 1 60 4.24E-14 T 13-10-2018 IPR027396 DsrEFH-like VEA_002296 5a2f108dc96774787bbf8177ff124b13 61 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 1 60 2.7E-17 T 13-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 VEA_000510 35d8ef0037f46803530262b13e1777b1 578 Gene3D G3DSA:1.10.287.130 176 283 3.1E-6 T 13-10-2018 VEA_000510 35d8ef0037f46803530262b13e1777b1 578 Pfam PF07730 Histidine kinase 369 437 7.5E-17 T 13-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 VEA_000510 35d8ef0037f46803530262b13e1777b1 578 SUPERFAMILY SSF55874 447 567 1.44E-15 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_000510 35d8ef0037f46803530262b13e1777b1 578 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 480 569 3.7E-9 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_000510 35d8ef0037f46803530262b13e1777b1 578 SMART SM00387 478 571 1.3E-9 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_000510 35d8ef0037f46803530262b13e1777b1 578 SUPERFAMILY SSF158472 178 225 1.19E-7 T 13-10-2018 VEA_000510 35d8ef0037f46803530262b13e1777b1 578 Gene3D G3DSA:1.20.120.960 40 148 2.9E-12 T 13-10-2018 VEA_000510 35d8ef0037f46803530262b13e1777b1 578 Gene3D G3DSA:3.30.565.10 438 575 2.1E-26 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_000510 35d8ef0037f46803530262b13e1777b1 578 PIRSF PIRSF003167 2 577 1.7E-177 T 13-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 VEA_000510 35d8ef0037f46803530262b13e1777b1 578 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 34 128 1.4E-21 T 13-10-2018 IPR029095 NarX-like, N-terminal VEA_000510 35d8ef0037f46803530262b13e1777b1 578 SMART SM00304 176 228 4.1E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_001931 22a406863785d4bd935e5b0d2d61b8e4 356 Pfam PF01594 AI-2E family transporter 17 333 2.9E-46 T 13-10-2018 IPR002549 Transmembrane protein TqsA-like VEA_000735 61cfd9cac392cffe0a869df2e8a40911 243 Pfam PF00460 Flagella basal body rod protein 3 17 5.0E-5 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VEA_000735 61cfd9cac392cffe0a869df2e8a40911 243 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 164 240 6.2E-27 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VEA_000735 61cfd9cac392cffe0a869df2e8a40911 243 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 1 242 8.8E-110 T 13-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 VEA_000735 61cfd9cac392cffe0a869df2e8a40911 243 SUPERFAMILY SSF117143 75 204 1.02E-36 T 13-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like VEA_000735 61cfd9cac392cffe0a869df2e8a40911 243 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 130 225 1.5E-32 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VEA_000735 61cfd9cac392cffe0a869df2e8a40911 243 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 118 3.6E-40 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VEA_004025 f220e25fac9401791b99d1e1dd2f39d0 624 Pfam PF07690 Major Facilitator Superfamily 20 379 3.6E-15 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEA_004025 f220e25fac9401791b99d1e1dd2f39d0 624 SUPERFAMILY SSF103473 12 424 2.49E-26 T 13-10-2018 IPR036259 MFS transporter superfamily VEA_004025 f220e25fac9401791b99d1e1dd2f39d0 624 SUPERFAMILY SSF69593 406 605 1.44E-29 T 13-10-2018 VEA_004025 f220e25fac9401791b99d1e1dd2f39d0 624 Gene3D G3DSA:1.20.1250.20 11 421 1.6E-25 T 13-10-2018 VEA_004025 f220e25fac9401791b99d1e1dd2f39d0 624 Pfam PF01553 Acyltransferase 442 567 2.8E-25 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VEA_004025 f220e25fac9401791b99d1e1dd2f39d0 624 SMART SM00563 456 570 1.6E-35 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VEA_002026 26b58969b124d28b15928eb887f8415d 135 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 1 135 6.3E-52 T 13-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 VEA_002026 26b58969b124d28b15928eb887f8415d 135 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 117 9.918 T 13-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VEA_002026 26b58969b124d28b15928eb887f8415d 135 Gene3D G3DSA:1.20.5.620 41 101 1.2E-23 T 13-10-2018 VEA_002026 26b58969b124d28b15928eb887f8415d 135 Pfam PF00430 ATP synthase B/B' CF(0) 1 116 1.1E-29 T 13-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VEA_002026 26b58969b124d28b15928eb887f8415d 135 SUPERFAMILY SSF81573 42 100 4.84E-15 T 13-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily VEA_002632 5c2064b8f920bbcfad68dc499def0846 239 Pfam PF01048 Phosphorylase superfamily 15 217 3.0E-41 T 13-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VEA_002632 5c2064b8f920bbcfad68dc499def0846 239 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 13-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 VEA_002632 5c2064b8f920bbcfad68dc499def0846 239 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.688 T 13-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VEA_002632 5c2064b8f920bbcfad68dc499def0846 239 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 4.5E-119 T 13-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VEA_002632 5c2064b8f920bbcfad68dc499def0846 239 SUPERFAMILY SSF53167 3 234 8.77E-93 T 13-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 VEA_002632 5c2064b8f920bbcfad68dc499def0846 239 Gene3D G3DSA:3.40.50.1580 1 238 6.0E-76 T 13-10-2018 VEA_000252 6ce181032c5fe893998a22964bceefdb 83 Pfam PF11212 Protein of unknown function (DUF2999) 1 82 6.0E-44 T 13-10-2018 IPR021376 Protein of unknown function DUF2999 VEA_003835 c2748bdd0062ebc3f698ddca777731c4 212 Gene3D G3DSA:3.40.50.620 15 152 2.2E-28 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_003835 c2748bdd0062ebc3f698ddca777731c4 212 Pfam PF02698 DUF218 domain 34 145 4.5E-21 T 13-10-2018 IPR003848 Domain of unknown function DUF218 VEA_003127 9e6a8853229f8cb74facb590832bde89 513 Pfam PF01471 Putative peptidoglycan binding domain 223 260 3.6E-9 T 13-10-2018 IPR002477 Peptidoglycan binding-like VEA_003127 9e6a8853229f8cb74facb590832bde89 513 SUPERFAMILY SSF141523 287 448 5.75E-19 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VEA_003127 9e6a8853229f8cb74facb590832bde89 513 SUPERFAMILY SSF47090 190 269 1.26E-11 T 13-10-2018 IPR036365 PGBD-like superfamily VEA_003127 9e6a8853229f8cb74facb590832bde89 513 Pfam PF03734 L,D-transpeptidase catalytic domain 288 454 2.3E-30 T 13-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 VEA_000165 08ee178f5193f3052a64240b4e0575fe 479 SUPERFAMILY SSF51905 9 295 8.01E-17 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_000165 08ee178f5193f3052a64240b4e0575fe 479 SUPERFAMILY SSF51735 11 124 4.72E-5 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_000165 08ee178f5193f3052a64240b4e0575fe 479 Pfam PF01266 FAD dependent oxidoreductase 12 396 3.0E-9 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VEA_000165 08ee178f5193f3052a64240b4e0575fe 479 Gene3D G3DSA:3.50.50.60 1 82 7.6E-9 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VEA_001523 68742d2f4b44581b321ca77322ae82dd 269 SMART SM00342 179 261 1.1E-26 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_001523 68742d2f4b44581b321ca77322ae82dd 269 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 261 6.0E-7 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEA_001523 68742d2f4b44581b321ca77322ae82dd 269 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 230 245 6.0E-7 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VEA_001523 68742d2f4b44581b321ca77322ae82dd 269 SUPERFAMILY SSF46689 215 264 3.32E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_001523 68742d2f4b44581b321ca77322ae82dd 269 SUPERFAMILY SSF51215 25 147 8.5E-5 T 13-10-2018 IPR037923 Transcription regulator HTH-like VEA_001523 68742d2f4b44581b321ca77322ae82dd 269 Pfam PF12833 Helix-turn-helix domain 185 262 1.6E-18 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VEA_001523 68742d2f4b44581b321ca77322ae82dd 269 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 215 257 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VEA_001523 68742d2f4b44581b321ca77322ae82dd 269 Gene3D G3DSA:1.10.10.60 162 268 1.3E-28 T 13-10-2018 VEA_002043 8962de5a32bc6b142e71d5dbe6d3b0df 318 PIRSF PIRSF028696 1 318 1.0E-124 T 13-10-2018 IPR016896 Protein of unknown function DUF2860 VEA_002043 8962de5a32bc6b142e71d5dbe6d3b0df 318 Pfam PF11059 Protein of unknown function (DUF2860) 26 316 4.4E-113 T 13-10-2018 IPR016896 Protein of unknown function DUF2860 VEA_002140 5a2d9da3975732a51e5fe6a1c97d790a 322 PIRSF PIRSF003097 24 318 2.6E-60 T 13-10-2018 IPR004513 Cell division protein FtsX GO:0016021 VEA_000204 9822e8fb2fa88ddd70628f5c8d3d1456 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 188 8.0E-27 T 13-10-2018 VEA_000204 9822e8fb2fa88ddd70628f5c8d3d1456 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 134 150 7.1E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEA_000204 9822e8fb2fa88ddd70628f5c8d3d1456 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 152 172 7.1E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEA_000204 9822e8fb2fa88ddd70628f5c8d3d1456 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 102 115 7.1E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEA_000204 9822e8fb2fa88ddd70628f5c8d3d1456 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 7.1E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEA_000204 9822e8fb2fa88ddd70628f5c8d3d1456 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 62 189 8.0E-12 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEA_000204 9822e8fb2fa88ddd70628f5c8d3d1456 222 Gene3D G3DSA:3.40.50.1000 9 195 1.2E-42 T 13-10-2018 IPR023214 HAD superfamily VEA_000204 9822e8fb2fa88ddd70628f5c8d3d1456 222 SUPERFAMILY SSF56784 5 218 9.87E-44 T 13-10-2018 IPR036412 HAD-like superfamily VEA_000204 9822e8fb2fa88ddd70628f5c8d3d1456 222 Gene3D G3DSA:1.10.150.240 21 88 1.2E-42 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VEA_000297 3da2a66f67e1a9ef02c1cf864c72e2e6 412 Gene3D G3DSA:1.20.1250.20 3 403 5.0E-57 T 13-10-2018 VEA_000297 3da2a66f67e1a9ef02c1cf864c72e2e6 412 SUPERFAMILY SSF103473 10 400 3.66E-56 T 13-10-2018 IPR036259 MFS transporter superfamily VEA_000297 3da2a66f67e1a9ef02c1cf864c72e2e6 412 Pfam PF07690 Major Facilitator Superfamily 17 297 2.5E-29 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEA_004041 84db6800118b3f1188e01ec53ac1d371 90 Gene3D G3DSA:4.10.520.10 1 90 2.3E-36 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VEA_004041 84db6800118b3f1188e01ec53ac1d371 90 SMART SM00411 1 90 4.1E-44 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VEA_004041 84db6800118b3f1188e01ec53ac1d371 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 13-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VEA_004041 84db6800118b3f1188e01ec53ac1d371 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 4.9E-34 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VEA_004041 84db6800118b3f1188e01ec53ac1d371 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 6.3E-21 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VEA_004041 84db6800118b3f1188e01ec53ac1d371 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 6.3E-21 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VEA_004041 84db6800118b3f1188e01ec53ac1d371 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 6.3E-21 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VEA_004041 84db6800118b3f1188e01ec53ac1d371 90 SUPERFAMILY SSF47729 1 90 3.39E-32 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VEA_003833 700142dcb370a2bd219f2f6bec9e2656 292 SUPERFAMILY SSF46785 3 85 2.45E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_003833 700142dcb370a2bd219f2f6bec9e2656 292 Pfam PF03466 LysR substrate binding domain 90 247 2.4E-19 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_003833 700142dcb370a2bd219f2f6bec9e2656 292 Gene3D G3DSA:3.40.190.290 93 290 3.0E-34 T 13-10-2018 VEA_003833 700142dcb370a2bd219f2f6bec9e2656 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.4E-17 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_003833 700142dcb370a2bd219f2f6bec9e2656 292 Gene3D G3DSA:1.10.10.10 2 86 3.3E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_003833 700142dcb370a2bd219f2f6bec9e2656 292 SUPERFAMILY SSF53850 90 291 1.4E-24 T 13-10-2018 VEA_004167 10ed2814a8981689ede391d133a60088 259 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 259 27.773 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VEA_004167 10ed2814a8981689ede391d133a60088 259 PRINTS PR01008 Flagellar L-ring protein signature 222 236 9.5E-21 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VEA_004167 10ed2814a8981689ede391d133a60088 259 PRINTS PR01008 Flagellar L-ring protein signature 201 217 9.5E-21 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VEA_004167 10ed2814a8981689ede391d133a60088 259 PRINTS PR01008 Flagellar L-ring protein signature 238 252 9.5E-21 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VEA_004167 10ed2814a8981689ede391d133a60088 259 PRINTS PR01008 Flagellar L-ring protein signature 102 114 9.5E-21 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VEA_004167 10ed2814a8981689ede391d133a60088 259 PRINTS PR01008 Flagellar L-ring protein signature 175 190 9.5E-21 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VEA_004167 10ed2814a8981689ede391d133a60088 259 Pfam PF02107 Flagellar L-ring protein 80 257 1.8E-57 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VEA_002711 32ec87fed0c437bd95e9c30ea7a6102f 198 PIRSF PIRSF006102 1 198 3.8E-66 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VEA_002711 32ec87fed0c437bd95e9c30ea7a6102f 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 2.0E-59 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VEA_002711 32ec87fed0c437bd95e9c30ea7a6102f 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.95 T 13-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VEA_002711 32ec87fed0c437bd95e9c30ea7a6102f 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 197 7.6E-108 T 13-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VEA_002788 176a524b68ac3799fc5201ccdee34297 483 SMART SM00028 340 373 21.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_002788 176a524b68ac3799fc5201ccdee34297 483 SMART SM00028 425 458 190.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_002788 176a524b68ac3799fc5201ccdee34297 483 SMART SM00028 306 339 34.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VEA_002788 176a524b68ac3799fc5201ccdee34297 483 Gene3D G3DSA:3.30.2010.10 74 147 1.2E-6 T 13-10-2018 VEA_002788 176a524b68ac3799fc5201ccdee34297 483 SUPERFAMILY SSF48452 310 454 1.14E-17 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_002788 176a524b68ac3799fc5201ccdee34297 483 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 3 482 39.712 T 13-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 VEA_002788 176a524b68ac3799fc5201ccdee34297 483 Pfam PF01435 Peptidase family M48 69 251 1.5E-27 T 13-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 VEA_002788 176a524b68ac3799fc5201ccdee34297 483 Pfam PF14559 Tetratricopeptide repeat 351 415 2.8E-9 T 13-10-2018 VEA_002788 176a524b68ac3799fc5201ccdee34297 483 Gene3D G3DSA:1.25.40.10 309 479 5.3E-20 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_001336 027cd182e4028a658c5ab541fe5a7617 301 Pfam PF05661 Protein of unknown function (DUF808) 4 291 2.4E-113 T 13-10-2018 IPR008526 Inner membrane protein YedI VEA_001336 027cd182e4028a658c5ab541fe5a7617 301 PIRSF PIRSF016660 1 301 2.2E-119 T 13-10-2018 IPR008526 Inner membrane protein YedI VEA_000449 7e4e8e3993a2f436f29804f0a1055650 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 1.2E-64 T 13-10-2018 IPR008514 Type VI secretion system effector, Hcp VEA_000449 7e4e8e3993a2f436f29804f0a1055650 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 1.2E-29 T 13-10-2018 IPR008514 Type VI secretion system effector, Hcp VEA_000449 7e4e8e3993a2f436f29804f0a1055650 172 SUPERFAMILY SSF141452 3 168 1.96E-38 T 13-10-2018 IPR036624 Hcp1-like superfamily VEA_000449 7e4e8e3993a2f436f29804f0a1055650 172 Gene3D G3DSA:2.30.110.20 2 172 2.7E-62 T 13-10-2018 IPR036624 Hcp1-like superfamily VEA_003497 97aafb463f47f2406825a18f865ed0e6 553 Pfam PF00037 4Fe-4S binding domain 446 466 2.0E-5 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEA_003497 97aafb463f47f2406825a18f865ed0e6 553 Pfam PF00037 4Fe-4S binding domain 419 435 1.5E-4 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEA_003497 97aafb463f47f2406825a18f865ed0e6 553 Pfam PF12838 4Fe-4S dicluster domain 185 231 1.2E-8 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEA_003497 97aafb463f47f2406825a18f865ed0e6 553 Gene3D G3DSA:3.30.70.20 413 482 2.1E-11 T 13-10-2018 VEA_003497 97aafb463f47f2406825a18f865ed0e6 553 Gene3D G3DSA:3.30.70.20 178 254 1.2E-12 T 13-10-2018 VEA_003497 97aafb463f47f2406825a18f865ed0e6 553 SUPERFAMILY SSF54862 143 504 4.42E-38 T 13-10-2018 VEA_003497 97aafb463f47f2406825a18f865ed0e6 553 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 451 462 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VEA_001887 204b563d532c1588d90f389e40af1bdc 111 SUPERFAMILY SSF54523 31 109 1.69E-22 T 13-10-2018 VEA_001887 204b563d532c1588d90f389e40af1bdc 111 Gene3D G3DSA:3.30.1300.30 24 111 4.9E-35 T 13-10-2018 VEA_001887 204b563d532c1588d90f389e40af1bdc 111 Pfam PF02501 Type II secretion system (T2SS), protein I 34 109 8.8E-21 T 13-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 VEA_001887 204b563d532c1588d90f389e40af1bdc 111 TIGRFAM TIGR01707 gspI: type II secretion system protein I 1 97 8.3E-35 T 13-10-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 VEA_002778 364dfe806394f2099bdf4e1895ea698d 191 Gene3D G3DSA:3.40.50.10490 1 191 6.3E-70 T 13-10-2018 VEA_002778 364dfe806394f2099bdf4e1895ea698d 191 SUPERFAMILY SSF53697 1 189 4.45E-51 T 13-10-2018 VEA_002778 364dfe806394f2099bdf4e1895ea698d 191 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 5.3E-81 T 13-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 VEA_002778 364dfe806394f2099bdf4e1895ea698d 191 Pfam PF13580 SIS domain 12 146 9.5E-30 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VEA_002778 364dfe806394f2099bdf4e1895ea698d 191 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 37.527 T 13-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 VEA_003739 0d2852fa328910d722df8175806463f7 456 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 406 422 - T 13-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 VEA_003739 0d2852fa328910d722df8175806463f7 456 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 38 456 2.0E-111 T 13-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VEA_003739 0d2852fa328910d722df8175806463f7 456 Pfam PF00939 Sodium:sulfate symporter transmembrane region 28 456 3.1E-57 T 13-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VEA_003307 8876e4e99d5c698403d3c7fc8cb106fb 208 PIRSF PIRSF006324 1 208 5.7E-56 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEA_003307 8876e4e99d5c698403d3c7fc8cb106fb 208 Pfam PF01810 LysE type translocator 15 205 1.0E-32 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEA_003767 94f13fac02198afe0bfbe8c317ee0e8d 383 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 380 23.608 T 13-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VEA_003767 94f13fac02198afe0bfbe8c317ee0e8d 383 Gene3D G3DSA:1.20.1530.10 3 381 3.4E-148 T 13-10-2018 IPR023171 Na/H antiporter domain superfamily VEA_003767 94f13fac02198afe0bfbe8c317ee0e8d 383 Pfam PF06965 Na+/H+ antiporter 1 7 373 4.3E-145 T 13-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VEA_003767 94f13fac02198afe0bfbe8c317ee0e8d 383 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 373 9.9E-194 T 13-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VEA_000180 e00f5458af7d5d8a848dc152f90d6b65 144 Pfam PF03061 Thioesterase superfamily 52 128 7.6E-15 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 VEA_000180 e00f5458af7d5d8a848dc152f90d6b65 144 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 21 135 1.4E-38 T 13-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 VEA_000180 e00f5458af7d5d8a848dc152f90d6b65 144 SUPERFAMILY SSF54637 1 137 2.15E-30 T 13-10-2018 IPR029069 HotDog domain superfamily VEA_000180 e00f5458af7d5d8a848dc152f90d6b65 144 Gene3D G3DSA:3.10.129.10 1 143 9.6E-57 T 13-10-2018 VEA_001136 c34cb6100b72c19276a51ce1852b1691 307 Gene3D G3DSA:3.40.190.290 91 294 8.4E-57 T 13-10-2018 VEA_001136 c34cb6100b72c19276a51ce1852b1691 307 SUPERFAMILY SSF46785 4 112 2.93E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_001136 c34cb6100b72c19276a51ce1852b1691 307 Gene3D G3DSA:1.10.10.10 1 90 3.5E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001136 c34cb6100b72c19276a51ce1852b1691 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.1E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_001136 c34cb6100b72c19276a51ce1852b1691 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.1E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_001136 c34cb6100b72c19276a51ce1852b1691 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.1E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_001136 c34cb6100b72c19276a51ce1852b1691 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.2E-19 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_001136 c34cb6100b72c19276a51ce1852b1691 307 SUPERFAMILY SSF53850 89 296 1.99E-40 T 13-10-2018 VEA_001136 c34cb6100b72c19276a51ce1852b1691 307 Pfam PF03466 LysR substrate binding domain 88 294 4.2E-39 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_002131 77f913ebadec1ffc889320da931bd66a 122 Pfam PF13643 Domain of unknown function (DUF4145) 9 73 6.1E-5 T 13-10-2018 IPR025285 Domain of unknown function DUF4145 VEA_001162 a736132af0988dc36490581b043849c8 71 TIGRFAM TIGR02450 TIGR02450: tryptophan-rich conserved hypothetical protein 10 71 1.1E-27 T 13-10-2018 IPR012663 Conserved hypothetical protein CHP02450, tryptophan-rich VEA_001162 a736132af0988dc36490581b043849c8 71 Pfam PF09493 Tryptophan-rich protein (DUF2389) 12 71 8.6E-24 T 13-10-2018 IPR012663 Conserved hypothetical protein CHP02450, tryptophan-rich VEA_001775 ef53326019a122b26274efbd84eb6c75 376 Pfam PF00953 Glycosyl transferase family 4 85 242 1.1E-24 T 13-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 VEA_001775 ef53326019a122b26274efbd84eb6c75 376 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 17 366 24.488 T 13-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 VEA_001775 ef53326019a122b26274efbd84eb6c75 376 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 22 363 3.2E-119 T 13-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 VEA_000720 bbde2aecac5b02af97ac29276ac3775a 323 Gene3D G3DSA:2.70.240.10 39 323 3.0E-12 T 13-10-2018 VEA_000720 bbde2aecac5b02af97ac29276ac3775a 323 Pfam PF07968 Leukocidin/Hemolysin toxin family 73 317 5.6E-9 T 13-10-2018 IPR016183 Leukocidin/Hemolysin toxin GO:0005576|GO:0051715 VEA_000720 bbde2aecac5b02af97ac29276ac3775a 323 SUPERFAMILY SSF56959 23 321 6.05E-67 T 13-10-2018 IPR036435 Leukocidin/porin MspA superfamily VEA_003998 2f35e487c91c1114054ea3ec9e81dc1e 179 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 48.665 T 13-10-2018 IPR022987 Uncharacterised protein family UPF0227 VEA_003998 2f35e487c91c1114054ea3ec9e81dc1e 179 SUPERFAMILY SSF53474 2 176 3.0E-6 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_003998 2f35e487c91c1114054ea3ec9e81dc1e 179 Gene3D G3DSA:3.40.50.1820 1 179 6.8E-21 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_003998 2f35e487c91c1114054ea3ec9e81dc1e 179 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 1.1E-69 T 13-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA VEA_000017 069d25f1fc54956c7247724228e60f5c 231 Pfam PF09867 Uncharacterized protein conserved in bacteria (DUF2094) 11 140 4.3E-38 T 13-10-2018 IPR017748 T6S-associated protein TagF VEA_000017 069d25f1fc54956c7247724228e60f5c 231 PIRSF PIRSF029287 1 229 3.2E-30 T 13-10-2018 IPR017748 T6S-associated protein TagF VEA_000017 069d25f1fc54956c7247724228e60f5c 231 TIGRFAM TIGR03373 VI_minor_4: type VI secretion-associated protein, BMA_A0400 family 11 141 1.1E-43 T 13-10-2018 IPR017748 T6S-associated protein TagF VEA_000017 069d25f1fc54956c7247724228e60f5c 231 Gene3D G3DSA:3.40.1730.10 7 230 1.9E-58 T 13-10-2018 IPR038225 T6S-associated protein TagF superfamily VEA_002102 dcb8a235ab2f1d6b8aff8486878d4a40 237 Gene3D G3DSA:2.40.30.10 1 102 1.4E-22 T 13-10-2018 VEA_002102 dcb8a235ab2f1d6b8aff8486878d4a40 237 SUPERFAMILY SSF52343 104 235 3.27E-34 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VEA_002102 dcb8a235ab2f1d6b8aff8486878d4a40 237 Gene3D G3DSA:3.40.50.80 103 237 1.6E-29 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VEA_002102 dcb8a235ab2f1d6b8aff8486878d4a40 237 Pfam PF00175 Oxidoreductase NAD-binding domain 112 215 6.1E-23 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VEA_002102 dcb8a235ab2f1d6b8aff8486878d4a40 237 SUPERFAMILY SSF63380 2 101 2.37E-17 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VEA_002102 dcb8a235ab2f1d6b8aff8486878d4a40 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 46 53 7.5E-14 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VEA_002102 dcb8a235ab2f1d6b8aff8486878d4a40 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 95 104 7.5E-14 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VEA_002102 dcb8a235ab2f1d6b8aff8486878d4a40 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 30 42 7.5E-14 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VEA_002102 dcb8a235ab2f1d6b8aff8486878d4a40 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 111 130 7.5E-14 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VEA_002102 dcb8a235ab2f1d6b8aff8486878d4a40 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 136 145 7.5E-14 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VEA_002510 8cb6c77c7a7b7033a1b241dd6defc090 234 Gene3D G3DSA:3.90.550.10 3 233 2.6E-74 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEA_002510 8cb6c77c7a7b7033a1b241dd6defc090 234 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 7 229 42.381 T 13-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 VEA_002510 8cb6c77c7a7b7033a1b241dd6defc090 234 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 229 4.8E-77 T 13-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 VEA_002510 8cb6c77c7a7b7033a1b241dd6defc090 234 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 230 4.2E-78 T 13-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 VEA_002510 8cb6c77c7a7b7033a1b241dd6defc090 234 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 105 112 - T 13-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 VEA_002510 8cb6c77c7a7b7033a1b241dd6defc090 234 SUPERFAMILY SSF53448 9 230 1.03E-61 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEA_000089 c9fe06389193d93f70853dbb73d002b1 446 PIRSF PIRSF002808 7 443 5.1E-144 T 13-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 VEA_000089 c9fe06389193d93f70853dbb73d002b1 446 ProSitePatterns PS00942 glpT family of transporters signature. 151 167 - T 13-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 VEA_000089 c9fe06389193d93f70853dbb73d002b1 446 Gene3D G3DSA:1.20.1250.20 19 223 4.4E-53 T 13-10-2018 VEA_000089 c9fe06389193d93f70853dbb73d002b1 446 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 413 1.7E-138 T 13-10-2018 VEA_000089 c9fe06389193d93f70853dbb73d002b1 446 Pfam PF07690 Major Facilitator Superfamily 36 396 5.9E-49 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEA_000089 c9fe06389193d93f70853dbb73d002b1 446 Gene3D G3DSA:1.20.1250.20 238 438 4.7E-43 T 13-10-2018 VEA_000089 c9fe06389193d93f70853dbb73d002b1 446 SUPERFAMILY SSF103473 17 441 6.54E-80 T 13-10-2018 IPR036259 MFS transporter superfamily VEA_000019 73d632193dd21e7e86848aa0a0e6e5c1 372 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 10 365 7.1E-80 T 13-10-2018 IPR017740 Type VI secretion system-associated, ImpA VEA_000019 73d632193dd21e7e86848aa0a0e6e5c1 372 Pfam PF06812 ImpA, N-terminal, type VI secretion system 13 142 8.2E-33 T 13-10-2018 IPR010657 ImpA, N-terminal VEA_001521 31dbc897139aceaec44234ae0efe26d8 274 Gene3D G3DSA:3.40.190.10 96 230 9.2E-81 T 13-10-2018 VEA_001521 31dbc897139aceaec44234ae0efe26d8 274 Pfam PF12849 PBP superfamily domain 18 255 6.4E-35 T 13-10-2018 IPR024370 PBP domain VEA_001521 31dbc897139aceaec44234ae0efe26d8 274 SUPERFAMILY SSF53850 23 269 2.29E-65 T 13-10-2018 VEA_001521 31dbc897139aceaec44234ae0efe26d8 274 Gene3D G3DSA:3.40.190.10 25 268 9.2E-81 T 13-10-2018 VEA_001521 31dbc897139aceaec44234ae0efe26d8 274 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 20 268 8.3E-65 T 13-10-2018 IPR011862 Phosphate binding protein GO:0042301 VEA_002772 42c53958cc08dc381ad3bb104b3e1d45 154 Hamap MF_00042 Ribonuclease H [rnhA]. 2 149 36.542 T 13-10-2018 IPR022892 Ribonuclease HI GO:0004523 VEA_002772 42c53958cc08dc381ad3bb104b3e1d45 154 Pfam PF00075 RNase H 3 141 1.9E-53 T 13-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 VEA_002772 42c53958cc08dc381ad3bb104b3e1d45 154 Gene3D G3DSA:3.30.420.10 1 154 3.5E-60 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VEA_002772 42c53958cc08dc381ad3bb104b3e1d45 154 SUPERFAMILY SSF53098 3 143 3.04E-58 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VEA_002400 adad4e97d287c3887fb7c5acffbd6002 287 Pfam PF03668 P-loop ATPase protein family 1 284 2.2E-109 T 13-10-2018 IPR005337 RapZ-like family GO:0005524 VEA_002400 adad4e97d287c3887fb7c5acffbd6002 287 Gene3D G3DSA:3.40.50.300 30 157 2.0E-5 T 13-10-2018 VEA_002400 adad4e97d287c3887fb7c5acffbd6002 287 SUPERFAMILY SSF52540 2 151 3.24E-12 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002400 adad4e97d287c3887fb7c5acffbd6002 287 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 283 39.813 T 13-10-2018 IPR005337 RapZ-like family GO:0005524 VEA_002400 adad4e97d287c3887fb7c5acffbd6002 287 PIRSF PIRSF005052 1 286 2.9E-106 T 13-10-2018 IPR005337 RapZ-like family GO:0005524 VEA_001517 504a483099b7932ca8a8d01a2f79516e 84 Pfam PF01381 Helix-turn-helix 13 65 2.0E-11 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VEA_001517 504a483099b7932ca8a8d01a2f79516e 84 Gene3D G3DSA:1.10.260.40 2 81 1.7E-14 T 13-10-2018 VEA_001517 504a483099b7932ca8a8d01a2f79516e 84 SMART SM00530 12 67 2.1E-10 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VEA_001517 504a483099b7932ca8a8d01a2f79516e 84 SUPERFAMILY SSF47413 6 68 1.88E-14 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEA_003454 81d05018756b5a5c9a5cd59ab597d1b0 357 Pfam PF05707 Zonular occludens toxin (Zot) 3 179 7.3E-33 T 13-10-2018 IPR008900 Zona occludens toxin VEA_003454 81d05018756b5a5c9a5cd59ab597d1b0 357 SUPERFAMILY SSF52540 3 133 2.36E-8 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003454 81d05018756b5a5c9a5cd59ab597d1b0 357 Gene3D G3DSA:3.40.50.300 1 161 1.5E-27 T 13-10-2018 VEA_003175 9b84087498fa9e5bb9cd792e63c3c100 138 Pfam PF07007 Lysozyme inhibitor LprI 25 117 7.5E-14 T 13-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal VEA_003175 9b84087498fa9e5bb9cd792e63c3c100 138 Gene3D G3DSA:1.20.1270.180 16 128 1.1E-13 T 13-10-2018 VEA_002308 adf10f6c8f2c90b699eace605921c755 300 Pfam PF02219 Methylenetetrahydrofolate reductase 17 291 2.7E-100 T 13-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 VEA_002308 adf10f6c8f2c90b699eace605921c755 300 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 1.1E-102 T 13-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 VEA_002308 adf10f6c8f2c90b699eace605921c755 300 SUPERFAMILY SSF51730 22 294 3.53E-95 T 13-10-2018 IPR029041 FAD-linked oxidoreductase-like VEA_002308 adf10f6c8f2c90b699eace605921c755 300 Gene3D G3DSA:3.20.20.220 1 299 9.8E-112 T 13-10-2018 VEA_002021 8224803e89d505f7b567aa96fd04a1e3 257 SUPERFAMILY SSF52540 2 254 6.9E-67 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002021 8224803e89d505f7b567aa96fd04a1e3 257 Pfam PF13614 AAA domain 2 178 5.6E-62 T 13-10-2018 IPR025669 AAA domain VEA_002021 8224803e89d505f7b567aa96fd04a1e3 257 PIRSF PIRSF009320 88 251 6.6E-9 T 13-10-2018 VEA_002021 8224803e89d505f7b567aa96fd04a1e3 257 PIRSF PIRSF009320 2 70 1.6E-13 T 13-10-2018 VEA_002021 8224803e89d505f7b567aa96fd04a1e3 257 Gene3D G3DSA:3.40.50.300 1 255 1.5E-76 T 13-10-2018 VEA_001923 d956f646af2fb663f6460d36db356442 132 Pfam PF02416 mttA/Hcf106 family 4 48 6.3E-5 T 13-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 VEA_001923 d956f646af2fb663f6460d36db356442 132 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 2.7E-32 T 13-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 VEA_001923 d956f646af2fb663f6460d36db356442 132 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 3.4E-27 T 13-10-2018 VEA_001923 d956f646af2fb663f6460d36db356442 132 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 3.4E-27 T 13-10-2018 VEA_001923 d956f646af2fb663f6460d36db356442 132 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 3.4E-27 T 13-10-2018 VEA_001923 d956f646af2fb663f6460d36db356442 132 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 124 18.174 T 13-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 VEA_004118 1e6ad766351e6c85096e50c5e4a6ad97 252 SUPERFAMILY SSF102705 1 251 8.24E-83 T 13-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily VEA_004118 1e6ad766351e6c85096e50c5e4a6ad97 252 Gene3D G3DSA:3.40.1390.30 97 223 1.0E-82 T 13-10-2018 VEA_004118 1e6ad766351e6c85096e50c5e4a6ad97 252 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 251 3.5E-70 T 13-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 VEA_004118 1e6ad766351e6c85096e50c5e4a6ad97 252 Gene3D G3DSA:3.40.1390.30 14 237 1.0E-82 T 13-10-2018 VEA_004118 1e6ad766351e6c85096e50c5e4a6ad97 252 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 239 1.7E-59 T 13-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 VEA_003351 ff9ee88da490de74734633d2141037ac 152 SUPERFAMILY SSF69635 1 146 6.67E-36 T 13-10-2018 VEA_003351 ff9ee88da490de74734633d2141037ac 152 Gene3D G3DSA:3.30.1460.10 1 131 6.1E-22 T 13-10-2018 VEA_003351 ff9ee88da490de74734633d2141037ac 152 Pfam PF05932 Tir chaperone protein (CesT) family 6 126 4.5E-26 T 13-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 VEA_003408 d437feddc6108e5802238817dd0540c2 397 SMART SM00359 3 87 3.0E-15 T 13-10-2018 IPR002478 PUA domain GO:0003723 VEA_003408 d437feddc6108e5802238817dd0540c2 397 Gene3D G3DSA:3.30.750.80 73 180 6.3E-36 T 13-10-2018 VEA_003408 d437feddc6108e5802238817dd0540c2 397 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 169 376 2.0E-29 T 13-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 VEA_003408 d437feddc6108e5802238817dd0540c2 397 SUPERFAMILY SSF53335 78 393 4.06E-69 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_003408 d437feddc6108e5802238817dd0540c2 397 Gene3D G3DSA:3.40.50.150 181 396 2.4E-69 T 13-10-2018 VEA_003408 d437feddc6108e5802238817dd0540c2 397 SUPERFAMILY SSF88697 4 73 1.99E-17 T 13-10-2018 IPR015947 PUA-like superfamily VEA_003408 d437feddc6108e5802238817dd0540c2 397 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 397 68.327 T 13-10-2018 IPR023542 rRNA large subunit methyltransferase I GO:0008649 VEA_003408 d437feddc6108e5802238817dd0540c2 397 Gene3D G3DSA:2.30.130.10 1 72 3.5E-29 T 13-10-2018 IPR036974 PUA domain superfamily GO:0003723 VEA_004522 76d533be9599df7013d97b87382daca8 442 Gene3D G3DSA:1.20.1600.10 23 442 1.6E-118 T 13-10-2018 VEA_004522 76d533be9599df7013d97b87382daca8 442 SUPERFAMILY SSF56954 1 430 4.97E-90 T 13-10-2018 VEA_004522 76d533be9599df7013d97b87382daca8 442 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 22 437 2.4E-107 T 13-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 VEA_004522 76d533be9599df7013d97b87382daca8 442 Pfam PF02321 Outer membrane efflux protein 241 424 2.9E-32 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VEA_004522 76d533be9599df7013d97b87382daca8 442 Pfam PF02321 Outer membrane efflux protein 25 216 1.3E-28 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VEA_001318 1d965df4e48ceae12dea4ef4b1dca1fc 343 Pfam PF13579 Glycosyl transferase 4-like domain 63 158 2.4E-11 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 VEA_001318 1d965df4e48ceae12dea4ef4b1dca1fc 343 Pfam PF13692 Glycosyl transferases group 1 182 310 5.0E-14 T 13-10-2018 VEA_001318 1d965df4e48ceae12dea4ef4b1dca1fc 343 Gene3D G3DSA:3.40.50.2000 182 331 1.8E-15 T 13-10-2018 VEA_001318 1d965df4e48ceae12dea4ef4b1dca1fc 343 Gene3D G3DSA:3.40.50.2000 3 181 9.2E-12 T 13-10-2018 VEA_001318 1d965df4e48ceae12dea4ef4b1dca1fc 343 SUPERFAMILY SSF53756 3 316 1.67E-36 T 13-10-2018 VEA_002852 4ddbe60d216ccc89d85df7be2b5980ad 419 SUPERFAMILY SSF56935 27 419 5.49E-90 T 13-10-2018 VEA_002852 4ddbe60d216ccc89d85df7be2b5980ad 419 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 18 419 1.7E-117 T 13-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VEA_002852 4ddbe60d216ccc89d85df7be2b5980ad 419 Gene3D G3DSA:2.40.160.60 27 419 1.3E-109 T 13-10-2018 VEA_004327 9ae59298b782ebe45ad68a96937ac1cc 515 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 86 101 - T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEA_004327 9ae59298b782ebe45ad68a96937ac1cc 515 Pfam PF01235 Sodium:alanine symporter family 51 472 1.6E-149 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEA_004327 9ae59298b782ebe45ad68a96937ac1cc 515 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 462 2.5E-135 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEA_004327 9ae59298b782ebe45ad68a96937ac1cc 515 PRINTS PR00175 Sodium/alanine symporter signature 304 322 4.5E-57 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEA_004327 9ae59298b782ebe45ad68a96937ac1cc 515 PRINTS PR00175 Sodium/alanine symporter signature 217 236 4.5E-57 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEA_004327 9ae59298b782ebe45ad68a96937ac1cc 515 PRINTS PR00175 Sodium/alanine symporter signature 189 207 4.5E-57 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEA_004327 9ae59298b782ebe45ad68a96937ac1cc 515 PRINTS PR00175 Sodium/alanine symporter signature 365 387 4.5E-57 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEA_004327 9ae59298b782ebe45ad68a96937ac1cc 515 PRINTS PR00175 Sodium/alanine symporter signature 428 448 4.5E-57 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEA_004327 9ae59298b782ebe45ad68a96937ac1cc 515 PRINTS PR00175 Sodium/alanine symporter signature 86 108 4.5E-57 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEA_001450 64fba04fa651f1637930091a3f1dbd69 236 Pfam PF02104 SURF1 family 2 209 6.1E-20 T 13-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_002289 599b1827b15609b371562cf621dc3ce5 317 SUPERFAMILY SSF56235 9 312 1.64E-96 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VEA_002289 599b1827b15609b371562cf621dc3ce5 317 Pfam PF01112 Asparaginase 11 314 3.1E-110 T 13-10-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 VEA_002289 599b1827b15609b371562cf621dc3ce5 317 Gene3D G3DSA:3.60.20.30 182 317 5.8E-46 T 13-10-2018 VEA_002706 aaea61eafaa95fe71ff02819926f7267 102 PIRSF PIRSF003113 1 99 5.5E-37 T 13-10-2018 IPR002634 BolA protein VEA_002706 aaea61eafaa95fe71ff02819926f7267 102 SUPERFAMILY SSF82657 1 88 1.44E-31 T 13-10-2018 IPR036065 BolA-like superfamily VEA_002706 aaea61eafaa95fe71ff02819926f7267 102 Pfam PF01722 BolA-like protein 10 83 6.8E-30 T 13-10-2018 IPR002634 BolA protein VEA_002706 aaea61eafaa95fe71ff02819926f7267 102 Gene3D G3DSA:3.30.300.90 1 89 1.2E-34 T 13-10-2018 VEA_003463 d4b11a544ae8a7ec9eb690fda4c332b7 126 Pfam PF12472 Phage related protein 67 123 1.1E-21 T 13-10-2018 IPR021096 Vibrio phage VSK, Orf152 VEA_002817 1351c2d1db97fa16b5ba8468ce99f37f 266 PRINTS PR01003 Flagellar assembly protein FliH signature 217 233 2.2E-5 T 13-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VEA_002817 1351c2d1db97fa16b5ba8468ce99f37f 266 PRINTS PR01003 Flagellar assembly protein FliH signature 89 111 2.2E-5 T 13-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VEA_002817 1351c2d1db97fa16b5ba8468ce99f37f 266 PRINTS PR01003 Flagellar assembly protein FliH signature 112 130 2.2E-5 T 13-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VEA_002817 1351c2d1db97fa16b5ba8468ce99f37f 266 Pfam PF02108 Flagellar assembly protein FliH 125 251 5.8E-36 T 13-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE VEA_004288 c126f632decc4af006d1367dbf955d4d 163 Pfam PF07963 Prokaryotic N-terminal methylation motif 34 57 1.6E-7 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEA_004288 c126f632decc4af006d1367dbf955d4d 163 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 35 55 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEA_004288 c126f632decc4af006d1367dbf955d4d 163 Gene3D G3DSA:3.30.700.10 38 163 7.0E-21 T 13-10-2018 VEA_004288 c126f632decc4af006d1367dbf955d4d 163 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 58 142 3.5E-14 T 13-10-2018 IPR031982 Type IV minor pilin ComP VEA_004288 c126f632decc4af006d1367dbf955d4d 163 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 36 57 9.1E-7 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEA_004288 c126f632decc4af006d1367dbf955d4d 163 SUPERFAMILY SSF54523 37 155 5.02E-18 T 13-10-2018 VEA_003410 1efcc3bb6270156eaabb68cf78a69aa5 59 ProSitePatterns PS00151 Acylphosphatase signature 2. 3 19 - T 13-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VEA_003410 1efcc3bb6270156eaabb68cf78a69aa5 59 Pfam PF00708 Acylphosphatase 1 58 7.9E-11 T 13-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VEA_003410 1efcc3bb6270156eaabb68cf78a69aa5 59 SUPERFAMILY SSF54975 1 58 2.62E-13 T 13-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VEA_003410 1efcc3bb6270156eaabb68cf78a69aa5 59 Gene3D G3DSA:3.30.70.100 1 59 1.7E-14 T 13-10-2018 VEA_004527 8ae1ca6569b818fedd7e2de04658a8b7 510 Gene3D G3DSA:1.40.20.10 215 444 3.7E-11 T 13-10-2018 IPR038186 CHAD domain superfamily VEA_004527 8ae1ca6569b818fedd7e2de04658a8b7 510 Gene3D G3DSA:2.40.320.10 1 204 1.0E-34 T 13-10-2018 VEA_004527 8ae1ca6569b818fedd7e2de04658a8b7 510 Pfam PF05235 CHAD domain 236 427 2.7E-8 T 13-10-2018 IPR007899 CHAD domain VEA_004527 8ae1ca6569b818fedd7e2de04658a8b7 510 Pfam PF01928 CYTH domain 3 202 1.7E-31 T 13-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 VEA_004527 8ae1ca6569b818fedd7e2de04658a8b7 510 SMART SM00880 234 502 4.4E-23 T 13-10-2018 IPR007899 CHAD domain VEA_004527 8ae1ca6569b818fedd7e2de04658a8b7 510 SMART SM01118 2 208 2.0E-42 T 13-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 VEA_004527 8ae1ca6569b818fedd7e2de04658a8b7 510 SUPERFAMILY SSF55154 1 217 4.09E-51 T 13-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 VEA_003387 4b5f87f38def3801262a0a3b8bf3d679 237 Pfam PF07729 FCD domain 92 217 3.1E-26 T 13-10-2018 IPR011711 GntR, C-terminal VEA_003387 4b5f87f38def3801262a0a3b8bf3d679 237 Gene3D G3DSA:1.10.10.10 12 80 8.4E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_003387 4b5f87f38def3801262a0a3b8bf3d679 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 82 6.3E-15 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_003387 4b5f87f38def3801262a0a3b8bf3d679 237 SUPERFAMILY SSF48008 88 224 7.85E-25 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VEA_003387 4b5f87f38def3801262a0a3b8bf3d679 237 Gene3D G3DSA:1.20.120.530 81 231 5.7E-29 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VEA_003387 4b5f87f38def3801262a0a3b8bf3d679 237 SUPERFAMILY SSF46785 16 110 1.73E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_003387 4b5f87f38def3801262a0a3b8bf3d679 237 SMART SM00345 24 82 1.4E-12 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_003387 4b5f87f38def3801262a0a3b8bf3d679 237 SMART SM00895 92 219 9.1E-24 T 13-10-2018 IPR011711 GntR, C-terminal VEA_003387 4b5f87f38def3801262a0a3b8bf3d679 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 56 5.0E-5 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_003387 4b5f87f38def3801262a0a3b8bf3d679 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 56 72 5.0E-5 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_004001 f6f8879f3967e56fb4e6b0b14f301eae 130 Gene3D G3DSA:2.60.40.3230 18 130 1.7E-28 T 13-10-2018 IPR038483 YcfL-like superfamily VEA_004001 f6f8879f3967e56fb4e6b0b14f301eae 130 Pfam PF07233 Protein of unknown function (DUF1425) 35 125 8.3E-30 T 13-10-2018 IPR010824 Protein of unknown function DUF1425 VEA_001166 c453826a24cf9212c37587b40cd70ab3 267 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 187 204 - T 13-10-2018 IPR000540 Flagellar motor protein MotA, conserved site VEA_001166 c453826a24cf9212c37587b40cd70ab3 267 Pfam PF01618 MotA/TolQ/ExbB proton channel family 116 220 2.7E-9 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VEA_001166 c453826a24cf9212c37587b40cd70ab3 267 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 263 4.9E-107 T 13-10-2018 IPR022522 Flagellar motor stator, MotA VEA_001452 91bdddecaa96a2b7c9e6cf726ff4dd33 339 Pfam PF02628 Cytochrome oxidase assembly protein 6 315 5.9E-82 T 13-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 VEA_000931 286504e70ce18b5f25c1a74224c423ca 151 SUPERFAMILY SSF56524 29 126 5.69E-11 T 13-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 VEA_000848 3b8d7dee33064cf8e46489fe91b0f622 252 PIRSF PIRSF028069 1 252 7.8E-108 T 13-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 VEA_000848 3b8d7dee33064cf8e46489fe91b0f622 252 Pfam PF11932 Protein of unknown function (DUF3450) 6 245 3.1E-86 T 13-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 VEA_003572 9bc87eb94e4e390747890e7ec5b9c5cc 374 Pfam PF13487 HD domain 236 304 6.9E-9 T 13-10-2018 VEA_003572 9bc87eb94e4e390747890e7ec5b9c5cc 374 SUPERFAMILY SSF109604 171 352 7.46E-13 T 13-10-2018 VEA_003572 9bc87eb94e4e390747890e7ec5b9c5cc 374 Gene3D G3DSA:1.10.3210.10 156 368 2.2E-32 T 13-10-2018 VEA_003572 9bc87eb94e4e390747890e7ec5b9c5cc 374 SUPERFAMILY SSF55781 13 140 4.91E-7 T 13-10-2018 VEA_003572 9bc87eb94e4e390747890e7ec5b9c5cc 374 Gene3D G3DSA:3.30.450.40 10 154 1.4E-6 T 13-10-2018 IPR029016 GAF-like domain superfamily VEA_001813 4747a67fc64d91b1fc5c3ff3792b82ed 267 Pfam PF02709 N-terminal domain of galactosyltransferase 166 226 4.6E-15 T 13-10-2018 IPR027791 Galactosyltransferase, C-terminal Reactome: R-HSA-2022854|Reactome: R-HSA-975577 VEA_001813 4747a67fc64d91b1fc5c3ff3792b82ed 267 Pfam PF00535 Glycosyl transferase family 2 5 121 2.8E-21 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VEA_001813 4747a67fc64d91b1fc5c3ff3792b82ed 267 SUPERFAMILY SSF53448 1 246 2.81E-41 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEA_001813 4747a67fc64d91b1fc5c3ff3792b82ed 267 Gene3D G3DSA:3.90.550.10 1 238 1.3E-47 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEA_003865 77414dfcc128682bcc557ba435acee7b 139 SUPERFAMILY SSF54427 5 130 1.32E-21 T 13-10-2018 IPR032710 NTF2-like domain superfamily VEA_003865 77414dfcc128682bcc557ba435acee7b 139 Pfam PF12680 SnoaL-like domain 9 108 6.3E-11 T 13-10-2018 IPR037401 SnoaL-like domain VEA_003865 77414dfcc128682bcc557ba435acee7b 139 Gene3D G3DSA:3.10.450.50 4 124 4.5E-20 T 13-10-2018 VEA_002171 6426c64da3541c5f51211d6e4b7bfb7a 164 Pfam PF00466 Ribosomal protein L10 5 101 7.2E-27 T 13-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 VEA_002171 6426c64da3541c5f51211d6e4b7bfb7a 164 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 13-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_002171 6426c64da3541c5f51211d6e4b7bfb7a 164 SUPERFAMILY SSF160369 4 158 1.44E-44 T 13-10-2018 VEA_002171 6426c64da3541c5f51211d6e4b7bfb7a 164 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 159 23.92 T 13-10-2018 IPR022973 Ribosomal protein L10 VEA_002171 6426c64da3541c5f51211d6e4b7bfb7a 164 Gene3D G3DSA:3.30.70.1730 1 124 1.8E-34 T 13-10-2018 VEA_002985 d1d9af8116781895edb01711d29df359 201 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 32 201 2.7E-58 T 13-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 VEA_002985 d1d9af8116781895edb01711d29df359 201 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 29 201 3.5E-69 T 13-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 VEA_002985 d1d9af8116781895edb01711d29df359 201 SUPERFAMILY SSF52540 12 201 6.57E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002985 d1d9af8116781895edb01711d29df359 201 PIRSF PIRSF015617 6 201 8.1E-66 T 13-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 VEA_002985 d1d9af8116781895edb01711d29df359 201 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 5 26 5.9E-7 T 13-10-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17 VEA_002985 d1d9af8116781895edb01711d29df359 201 Gene3D G3DSA:3.40.50.300 11 201 3.2E-70 T 13-10-2018 VEA_003479 1ffe908d1e9ecc5495eedd2b9c4e3bf0 237 Gene3D G3DSA:1.10.530.10 97 234 4.4E-14 T 13-10-2018 VEA_003479 1ffe908d1e9ecc5495eedd2b9c4e3bf0 237 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 98 232 8.1E-17 T 13-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 VEA_000342 f4353b12b6bdd65ddc5f86e176f76092 139 SUPERFAMILY SSF102546 1 139 8.24E-44 T 13-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 VEA_000342 f4353b12b6bdd65ddc5f86e176f76092 139 Pfam PF05025 RbsD / FucU transport protein family 1 138 1.1E-48 T 13-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 VEA_000342 f4353b12b6bdd65ddc5f86e176f76092 139 Gene3D G3DSA:3.40.1650.10 8 136 8.2E-38 T 13-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 VEA_000342 f4353b12b6bdd65ddc5f86e176f76092 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 33.261 T 13-10-2018 IPR023064 D-ribose pyranase GO:0016872 VEA_004133 ac5de645fe6cd1b715f876c066d79161 166 Gene3D G3DSA:3.30.70.940 1 165 1.4E-52 T 13-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VEA_004133 ac5de645fe6cd1b715f876c066d79161 166 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 166 47.342 T 13-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 VEA_004133 ac5de645fe6cd1b715f876c066d79161 166 SMART SM00738 1 101 5.7E-27 T 13-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VEA_004133 ac5de645fe6cd1b715f876c066d79161 166 SUPERFAMILY SSF82679 1 101 3.01E-29 T 13-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VEA_004133 ac5de645fe6cd1b715f876c066d79161 166 SUPERFAMILY SSF50104 115 163 2.11E-5 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily VEA_004133 ac5de645fe6cd1b715f876c066d79161 166 Pfam PF02357 Transcription termination factor nusG 2 95 1.0E-19 T 13-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VEA_004133 ac5de645fe6cd1b715f876c066d79161 166 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 163 2.0E-61 T 13-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 VEA_000293 16c90a15ee39d4a9db1cb64a180208c2 455 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 55 441 3.5E-140 T 13-10-2018 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 VEA_000293 16c90a15ee39d4a9db1cb64a180208c2 455 Pfam PF03606 C4-dicarboxylate anaerobic carrier 2 451 5.5E-124 T 13-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 VEA_004292 17beaa47149ed56b742b8be5e1765a9c 424 SUPERFAMILY SSF118215 5 406 8.11E-106 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VEA_004292 17beaa47149ed56b742b8be5e1765a9c 424 Pfam PF00375 Sodium:dicarboxylate symporter family 6 404 2.7E-115 T 13-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 VEA_004292 17beaa47149ed56b742b8be5e1765a9c 424 Gene3D G3DSA:1.10.3860.10 1 421 5.2E-114 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VEA_004292 17beaa47149ed56b742b8be5e1765a9c 424 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 5.2E-37 T 13-10-2018 VEA_004292 17beaa47149ed56b742b8be5e1765a9c 424 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 5.2E-37 T 13-10-2018 VEA_004292 17beaa47149ed56b742b8be5e1765a9c 424 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 5.2E-37 T 13-10-2018 VEA_004292 17beaa47149ed56b742b8be5e1765a9c 424 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 5.2E-37 T 13-10-2018 VEA_004292 17beaa47149ed56b742b8be5e1765a9c 424 PRINTS PR00173 Glutamate-aspartate symporter signature 148 170 5.2E-37 T 13-10-2018 VEA_004292 17beaa47149ed56b742b8be5e1765a9c 424 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 5.2E-37 T 13-10-2018 VEA_004292 17beaa47149ed56b742b8be5e1765a9c 424 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 5.2E-37 T 13-10-2018 VEA_004292 17beaa47149ed56b742b8be5e1765a9c 424 PRINTS PR00173 Glutamate-aspartate symporter signature 359 379 5.2E-37 T 13-10-2018 VEA_003547 78163e511f04537e25c2552ec7c86229 159 SUPERFAMILY SSF56925 17 158 3.66E-20 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VEA_003547 78163e511f04537e25c2552ec7c86229 159 Gene3D G3DSA:2.40.160.20 18 159 2.2E-23 T 13-10-2018 VEA_003547 78163e511f04537e25c2552ec7c86229 159 Pfam PF13505 Outer membrane protein beta-barrel domain 5 158 4.4E-17 T 13-10-2018 IPR027385 Outer membrane protein beta-barrel VEA_000910 13411f55cb952abe168340887ad9c584 640 SUPERFAMILY SSF82171 42 375 1.28E-23 T 13-10-2018 VEA_000910 13411f55cb952abe168340887ad9c584 640 Gene3D G3DSA:3.40.50.1820 277 638 3.0E-81 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_000910 13411f55cb952abe168340887ad9c584 640 SUPERFAMILY SSF53474 378 635 1.58E-69 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_000910 13411f55cb952abe168340887ad9c584 640 Gene3D G3DSA:2.120.10.30 38 227 1.6E-8 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like VEA_000910 13411f55cb952abe168340887ad9c584 640 Pfam PF00326 Prolyl oligopeptidase family 422 635 1.2E-47 T 13-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 VEA_000910 13411f55cb952abe168340887ad9c584 640 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 433 457 3.7E-5 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VEA_000910 13411f55cb952abe168340887ad9c584 640 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 491 511 3.7E-5 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VEA_000910 13411f55cb952abe168340887ad9c584 640 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 552 567 3.7E-5 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 VEA_001415 6931bbb75a97372af6c2061e1047502c 172 Gene3D G3DSA:1.20.120.330 1 168 3.9E-49 T 13-10-2018 VEA_001415 6931bbb75a97372af6c2061e1047502c 172 Pfam PF05068 Mannitol repressor 4 166 2.7E-50 T 13-10-2018 IPR007761 Mannitol repressor MtlR-like VEA_001415 6931bbb75a97372af6c2061e1047502c 172 SUPERFAMILY SSF158668 3 166 1.29E-50 T 13-10-2018 IPR038026 MtlR-like superfamily VEA_000708 c426131592c3782eae9fd698dd17b39f 901 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 7 595 2.6E-86 T 13-10-2018 IPR005887 Alpha-1,2-mannosidase, putative VEA_000708 c426131592c3782eae9fd698dd17b39f 901 Pfam PF07971 Glycosyl hydrolase family 92 286 891 3.0E-141 T 13-10-2018 IPR012939 Glycosyl hydrolase family 92 VEA_000708 c426131592c3782eae9fd698dd17b39f 901 SUPERFAMILY SSF48208 313 887 1.07E-27 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VEA_000176 43d7d28b79ada4e4c475cbbcf89e88b9 102 SUPERFAMILY SSF54913 1 98 7.41E-32 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta VEA_000176 43d7d28b79ada4e4c475cbbcf89e88b9 102 Pfam PF03091 CutA1 divalent ion tolerance protein 1 96 1.9E-32 T 13-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 VEA_000176 43d7d28b79ada4e4c475cbbcf89e88b9 102 Gene3D G3DSA:3.30.70.120 1 100 2.7E-33 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VEA_000943 9d7fa8b33e84080b42535f8819f61024 94 Pfam PF06865 Protein of unknown function (DUF1255) 4 93 4.0E-34 T 13-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 VEA_000943 9d7fa8b33e84080b42535f8819f61024 94 SUPERFAMILY SSF51182 3 93 2.49E-33 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily VEA_000943 9d7fa8b33e84080b42535f8819f61024 94 Gene3D G3DSA:2.60.120.10 1 94 1.8E-36 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VEA_000943 9d7fa8b33e84080b42535f8819f61024 94 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 2 94 24.336 T 13-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 VEA_003485 decb4168762d47dfe3cfc4fb637f0047 345 Gene3D G3DSA:3.40.190.10 29 312 6.3E-121 T 13-10-2018 VEA_003485 decb4168762d47dfe3cfc4fb637f0047 345 PIRSF PIRSF019574 1 345 1.6E-124 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEA_003485 decb4168762d47dfe3cfc4fb637f0047 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 30 46 1.9E-84 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEA_003485 decb4168762d47dfe3cfc4fb637f0047 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 146 160 1.9E-84 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEA_003485 decb4168762d47dfe3cfc4fb637f0047 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 89 102 1.9E-84 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEA_003485 decb4168762d47dfe3cfc4fb637f0047 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 46 67 1.9E-84 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEA_003485 decb4168762d47dfe3cfc4fb637f0047 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 290 316 1.9E-84 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEA_003485 decb4168762d47dfe3cfc4fb637f0047 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 245 264 1.9E-84 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEA_003485 decb4168762d47dfe3cfc4fb637f0047 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 120 136 1.9E-84 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEA_003485 decb4168762d47dfe3cfc4fb637f0047 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 164 183 1.9E-84 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEA_003485 decb4168762d47dfe3cfc4fb637f0047 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 73 87 1.9E-84 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEA_003485 decb4168762d47dfe3cfc4fb637f0047 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 201 220 1.9E-84 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VEA_003485 decb4168762d47dfe3cfc4fb637f0047 345 Pfam PF13416 Bacterial extracellular solute-binding protein 40 311 7.9E-43 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein VEA_003485 decb4168762d47dfe3cfc4fb637f0047 345 SUPERFAMILY SSF53850 24 342 3.51E-92 T 13-10-2018 VEA_003485 decb4168762d47dfe3cfc4fb637f0047 345 Gene3D G3DSA:3.40.190.10 129 318 6.3E-121 T 13-10-2018 VEA_002607 74d93fd9056a29c634e93b2aef78a85d 151 SUPERFAMILY SSF75420 2 83 2.62E-26 T 13-10-2018 IPR035956 RimP, N-terminal domain superfamily VEA_002607 74d93fd9056a29c634e93b2aef78a85d 151 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 24.743 T 13-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 VEA_002607 74d93fd9056a29c634e93b2aef78a85d 151 Pfam PF02576 RimP N-terminal domain 12 83 1.7E-29 T 13-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal VEA_002607 74d93fd9056a29c634e93b2aef78a85d 151 Pfam PF17384 RimP C-terminal SH3 domain 86 151 2.0E-21 T 13-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal VEA_002607 74d93fd9056a29c634e93b2aef78a85d 151 SUPERFAMILY SSF74942 84 151 4.18E-18 T 13-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily VEA_002607 74d93fd9056a29c634e93b2aef78a85d 151 Gene3D G3DSA:3.30.300.70 1 80 8.7E-27 T 13-10-2018 IPR035956 RimP, N-terminal domain superfamily VEA_001508 d0b1d3e0eeda33e12a5b5fb00ab49e34 279 Gene3D G3DSA:3.40.800.10 98 223 1.4E-8 T 13-10-2018 VEA_001508 d0b1d3e0eeda33e12a5b5fb00ab49e34 279 SUPERFAMILY SSF52768 40 250 1.53E-19 T 13-10-2018 IPR023696 Ureohydrolase domain superfamily VEA_001508 d0b1d3e0eeda33e12a5b5fb00ab49e34 279 Pfam PF00491 Arginase family 112 214 7.7E-5 T 13-10-2018 IPR006035 Ureohydrolase GO:0046872 VEA_002583 9d56fa36aa49e15df3460354488d027f 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 317 2.0E-22 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VEA_002583 9d56fa36aa49e15df3460354488d027f 327 Gene3D G3DSA:3.40.50.300 3 326 7.1E-91 T 13-10-2018 VEA_002583 9d56fa36aa49e15df3460354488d027f 327 SMART SM00382 34 231 1.4E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_002583 9d56fa36aa49e15df3460354488d027f 327 Pfam PF00005 ABC transporter 26 181 7.2E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_002583 9d56fa36aa49e15df3460354488d027f 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 6.3E-18 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VEA_002583 9d56fa36aa49e15df3460354488d027f 327 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_002583 9d56fa36aa49e15df3460354488d027f 327 SUPERFAMILY SSF52540 5 252 1.1E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003817 613c87850962ef162333f0621e6f6363 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 314 8.8E-43 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_003817 613c87850962ef162333f0621e6f6363 320 SUPERFAMILY SSF161098 69 298 2.45E-20 T 13-10-2018 IPR035906 MetI-like superfamily VEA_003817 613c87850962ef162333f0621e6f6363 320 Gene3D G3DSA:1.10.3720.10 69 308 1.1E-23 T 13-10-2018 IPR035906 MetI-like superfamily VEA_001389 5de4797f02f9a6aae4acfcad38e023c2 180 Pfam PF13302 Acetyltransferase (GNAT) domain 7 140 3.5E-21 T 13-10-2018 IPR000182 GNAT domain VEA_001389 5de4797f02f9a6aae4acfcad38e023c2 180 SUPERFAMILY SSF55729 4 165 1.74E-42 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_001389 5de4797f02f9a6aae4acfcad38e023c2 180 Gene3D G3DSA:3.40.630.30 6 174 1.5E-51 T 13-10-2018 VEA_002910 1a94dd2d0b48e6d08d5767fe0a40de1c 273 Pfam PF11207 Protein of unknown function (DUF2989) 16 218 6.8E-72 T 13-10-2018 IPR021372 Protein of unknown function DUF2989 VEA_001952 3642ddaed0ff9727efae0df80ff59fda 680 Gene3D G3DSA:1.10.1370.10 140 610 3.7E-270 T 13-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 VEA_001952 3642ddaed0ff9727efae0df80ff59fda 680 Gene3D G3DSA:1.10.1370.40 13 675 3.7E-270 T 13-10-2018 VEA_001952 3642ddaed0ff9727efae0df80ff59fda 680 Pfam PF01432 Peptidase family M3 222 677 2.1E-164 T 13-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 VEA_001952 3642ddaed0ff9727efae0df80ff59fda 680 SUPERFAMILY SSF55486 1 677 3.05E-213 T 13-10-2018 VEA_002432 b4dfad971723138c5e3d5a380e421367 422 Pfam PF10011 Predicted membrane protein (DUF2254) 15 369 5.6E-98 T 13-10-2018 IPR018723 Protein of unknown function DUF2254, membrane VEA_004235 00e8202884901401353283adfddf7b30 474 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 30 111 3.1E-17 T 13-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VEA_004235 00e8202884901401353283adfddf7b30 474 SUPERFAMILY SSF55604 9 81 3.53E-21 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VEA_004235 00e8202884901401353283adfddf7b30 474 Gene3D G3DSA:3.30.1360.60 3 78 2.2E-24 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VEA_004235 00e8202884901401353283adfddf7b30 474 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 7 460 5.9E-207 T 13-10-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00500+2.7.1.201 VEA_004235 00e8202884901401353283adfddf7b30 474 Pfam PF02378 Phosphotransferase system, EIIC 112 404 4.3E-34 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VEA_004235 00e8202884901401353283adfddf7b30 474 Pfam PF00367 phosphotransferase system, EIIB 11 43 1.4E-14 T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VEA_004235 00e8202884901401353283adfddf7b30 474 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VEA_001692 9f8aa0a47f680b7ac96b735358a91c0f 115 Gene3D G3DSA:3.10.490.10 4 115 1.5E-38 T 13-10-2018 VEA_001692 9f8aa0a47f680b7ac96b735358a91c0f 115 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 5 112 1.9E-25 T 13-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like VEA_001692 9f8aa0a47f680b7ac96b735358a91c0f 115 SUPERFAMILY SSF110857 3 113 1.7E-32 T 13-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily VEA_004502 7ce8b0fa8535f54ace000390f096bfce 122 Gene3D G3DSA:3.40.1350.10 13 122 5.1E-32 T 13-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 VEA_004502 7ce8b0fa8535f54ace000390f096bfce 122 SUPERFAMILY SSF52980 7 112 6.17E-22 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VEA_004502 7ce8b0fa8535f54ace000390f096bfce 122 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 7 120 2.6E-35 T 13-10-2018 IPR003509 Uncharacterised protein family UPF0102 VEA_004502 7ce8b0fa8535f54ace000390f096bfce 122 Hamap MF_00048 UPF0102 protein YraN [yraN]. 6 118 23.943 T 13-10-2018 IPR003509 Uncharacterised protein family UPF0102 VEA_004502 7ce8b0fa8535f54ace000390f096bfce 122 Pfam PF02021 Uncharacterised protein family UPF0102 13 105 3.9E-28 T 13-10-2018 IPR003509 Uncharacterised protein family UPF0102 VEA_002916 124494ddfb486e1c43d3919d576d8c5d 182 PIRSF PIRSF000232 1 182 3.5E-63 T 13-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like VEA_002916 124494ddfb486e1c43d3919d576d8c5d 182 Gene3D G3DSA:3.40.109.10 1 182 7.1E-43 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VEA_002916 124494ddfb486e1c43d3919d576d8c5d 182 Pfam PF00881 Nitroreductase family 8 161 9.9E-24 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 VEA_002916 124494ddfb486e1c43d3919d576d8c5d 182 SUPERFAMILY SSF55469 1 181 2.22E-42 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VEA_000620 3ff4e7ca0beda8f9ab1d91b65e3883a3 959 Pfam PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain 364 509 1.7E-6 T 13-10-2018 IPR035396 Alpha-L-rhamnosidase, six-hairpin glycosidase domain VEA_000620 3ff4e7ca0beda8f9ab1d91b65e3883a3 959 Gene3D G3DSA:1.50.10.10 279 587 4.0E-27 T 13-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 VEA_000620 3ff4e7ca0beda8f9ab1d91b65e3883a3 959 SUPERFAMILY SSF48208 254 680 1.05E-36 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VEA_000064 e4f406695d9e8dae379664c1fab81704 594 Pfam PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase 396 467 1.6E-7 T 13-10-2018 IPR018905 Alpha-galactosidase, NEW3 domain VEA_000064 e4f406695d9e8dae379664c1fab81704 594 Pfam PF13583 Metallo-peptidase family M12B Reprolysin-like 75 220 9.0E-6 T 13-10-2018 VEA_000064 e4f406695d9e8dae379664c1fab81704 594 Gene3D G3DSA:2.60.40.10 386 486 4.8E-6 T 13-10-2018 IPR013783 Immunoglobulin-like fold VEA_000064 e4f406695d9e8dae379664c1fab81704 594 SUPERFAMILY SSF55486 72 206 1.21E-9 T 13-10-2018 VEA_002031 eb15769092a576367b4dd7c8467926b4 140 Gene3D G3DSA:2.60.15.10 4 91 1.2E-30 T 13-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_002031 eb15769092a576367b4dd7c8467926b4 140 SUPERFAMILY SSF51344 5 87 2.62E-24 T 13-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_002031 eb15769092a576367b4dd7c8467926b4 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 134 1.6E-11 T 13-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain VEA_002031 eb15769092a576367b4dd7c8467926b4 140 Gene3D G3DSA:1.20.5.440 92 135 2.5E-19 T 13-10-2018 VEA_002031 eb15769092a576367b4dd7c8467926b4 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 91 1.0E-40 T 13-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_002031 eb15769092a576367b4dd7c8467926b4 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 134 9.0E-44 T 13-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_002031 eb15769092a576367b4dd7c8467926b4 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 132 20.814 T 13-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_002031 eb15769092a576367b4dd7c8467926b4 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 85 1.2E-28 T 13-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_002031 eb15769092a576367b4dd7c8467926b4 140 SUPERFAMILY SSF46604 89 138 2.62E-14 T 13-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VEA_000958 93fc81d254ac7b9aa46cbebdd1feea01 231 SUPERFAMILY SSF51182 1 230 6.63E-73 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily VEA_000958 93fc81d254ac7b9aa46cbebdd1feea01 231 Gene3D G3DSA:2.60.120.10 11 135 1.2E-83 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VEA_000958 93fc81d254ac7b9aa46cbebdd1feea01 231 Pfam PF02678 Pirin 12 119 1.3E-33 T 13-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 VEA_000958 93fc81d254ac7b9aa46cbebdd1feea01 231 PIRSF PIRSF006232 1 230 5.0E-55 T 13-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 VEA_000958 93fc81d254ac7b9aa46cbebdd1feea01 231 Gene3D G3DSA:2.60.120.10 7 231 1.2E-83 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VEA_004262 5cd535316f3bce72dae62d119b28153f 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 3.4E-54 T 13-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VEA_004262 5cd535316f3bce72dae62d119b28153f 156 Gene3D G3DSA:3.40.50.960 1 156 1.7E-63 T 13-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VEA_004262 5cd535316f3bce72dae62d119b28153f 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.055 T 13-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VEA_004262 5cd535316f3bce72dae62d119b28153f 156 SUPERFAMILY SSF52121 4 154 1.57E-59 T 13-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VEA_004262 5cd535316f3bce72dae62d119b28153f 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 1.6E-56 T 13-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VEA_003154 3eeae583b5c9cd55a2a3ca633dc1433a 571 Pfam PF00563 EAL domain 358 568 1.1E-41 T 13-10-2018 IPR001633 EAL domain VEA_003154 3eeae583b5c9cd55a2a3ca633dc1433a 571 SUPERFAMILY SSF141868 358 568 2.62E-47 T 13-10-2018 IPR035919 EAL domain superfamily VEA_003154 3eeae583b5c9cd55a2a3ca633dc1433a 571 SMART SM00052 343 570 4.3E-16 T 13-10-2018 IPR001633 EAL domain VEA_003154 3eeae583b5c9cd55a2a3ca633dc1433a 571 Gene3D G3DSA:3.20.20.450 349 570 2.0E-46 T 13-10-2018 IPR035919 EAL domain superfamily VEA_004177 a66201d28b99e7357ac470baf6f8ad2b 104 SUPERFAMILY SSF101498 2 97 1.57E-21 T 13-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily VEA_004177 a66201d28b99e7357ac470baf6f8ad2b 104 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 4 97 3.1E-23 T 13-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 VEA_004177 a66201d28b99e7357ac470baf6f8ad2b 104 Pfam PF04316 Anti-sigma-28 factor, FlgM 41 94 1.8E-17 T 13-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal VEA_000453 50c022ef702675b0117007c04fea7354 367 SUPERFAMILY SSF69304 105 248 8.89E-11 T 13-10-2018 VEA_004434 9c0e364bfd4befd6eafb81868afef7a2 344 SUPERFAMILY SSF51430 1 344 4.19E-109 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VEA_004434 9c0e364bfd4befd6eafb81868afef7a2 344 Gene3D G3DSA:3.20.20.100 1 344 2.8E-135 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VEA_004434 9c0e364bfd4befd6eafb81868afef7a2 344 Pfam PF00248 Aldo/keto reductase family 15 335 9.4E-75 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain VEA_004062 4cae446de2a47ef3fe0c0b9e4898fe4a 242 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 28 240 1.4E-74 T 13-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal VEA_004062 4cae446de2a47ef3fe0c0b9e4898fe4a 242 SUPERFAMILY SSF53901 45 154 4.53E-6 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 VEA_002574 5643bbef3057acff6771fd9d8c5c269b 337 Gene3D G3DSA:3.40.190.10 25 297 9.7E-127 T 13-10-2018 VEA_002574 5643bbef3057acff6771fd9d8c5c269b 337 PIRSF PIRSF002825 1 337 2.6E-102 T 13-10-2018 IPR026045 Ferric binding protein VEA_002574 5643bbef3057acff6771fd9d8c5c269b 337 Gene3D G3DSA:3.40.190.10 120 328 9.7E-127 T 13-10-2018 VEA_002574 5643bbef3057acff6771fd9d8c5c269b 337 SUPERFAMILY SSF53850 24 332 2.36E-76 T 13-10-2018 VEA_002574 5643bbef3057acff6771fd9d8c5c269b 337 Pfam PF13343 Bacterial extracellular solute-binding protein 72 298 3.6E-20 T 13-10-2018 VEA_002236 261b59d050877e157b2988f37c9e1752 252 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 111 1.7E-32 T 13-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEA_002236 261b59d050877e157b2988f37c9e1752 252 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 13-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VEA_002236 261b59d050877e157b2988f37c9e1752 252 Gene3D G3DSA:3.10.20.30 1 106 4.0E-35 T 13-10-2018 IPR012675 Beta-grasp domain superfamily VEA_002236 261b59d050877e157b2988f37c9e1752 252 SUPERFAMILY SSF46548 107 226 6.45E-31 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VEA_002236 261b59d050877e157b2988f37c9e1752 252 Pfam PF13183 4Fe-4S dicluster domain 147 219 6.2E-11 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEA_002236 261b59d050877e157b2988f37c9e1752 252 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 4.4E-95 T 13-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEA_002236 261b59d050877e157b2988f37c9e1752 252 SUPERFAMILY SSF54292 5 106 1.1E-29 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VEA_002236 261b59d050877e157b2988f37c9e1752 252 Gene3D G3DSA:1.10.1060.10 107 244 2.4E-50 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VEA_002236 261b59d050877e157b2988f37c9e1752 252 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VEA_001539 27d63ff424dbb9f495119ca8270d01ba 292 Pfam PF00892 EamA-like transporter family 150 279 1.9E-16 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEA_001539 27d63ff424dbb9f495119ca8270d01ba 292 Pfam PF00892 EamA-like transporter family 10 138 6.6E-12 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEA_001539 27d63ff424dbb9f495119ca8270d01ba 292 SUPERFAMILY SSF103481 42 142 5.23E-9 T 13-10-2018 VEA_001539 27d63ff424dbb9f495119ca8270d01ba 292 SUPERFAMILY SSF103481 183 285 7.06E-16 T 13-10-2018 VEA_001802 f57c721e5dc9dd77985061f1f9cf5ce0 383 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 30 378 2.5E-80 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VEA_001802 f57c721e5dc9dd77985061f1f9cf5ce0 383 SUPERFAMILY SSF53383 18 378 5.42E-93 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_001802 f57c721e5dc9dd77985061f1f9cf5ce0 383 TIGRFAM TIGR04181 NHT_00031: aminotransferase, LLPSF_NHT_00031 family 20 376 9.2E-164 T 13-10-2018 IPR026385 Aminotransferase, LLPSF_NHT_00031 family VEA_001802 f57c721e5dc9dd77985061f1f9cf5ce0 383 PIRSF PIRSF000390 15 382 3.8E-86 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VEA_001802 f57c721e5dc9dd77985061f1f9cf5ce0 383 Gene3D G3DSA:3.90.1150.10 277 380 1.3E-17 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEA_001802 f57c721e5dc9dd77985061f1f9cf5ce0 383 Gene3D G3DSA:3.40.640.10 4 275 1.6E-85 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_002562 d14b9e4f9bb44930cd5766263a54296d 161 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 8.8E-47 T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VEA_002562 d14b9e4f9bb44930cd5766263a54296d 161 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 2.7E-38 T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VEA_002562 d14b9e4f9bb44930cd5766263a54296d 161 SUPERFAMILY SSF55083 1 159 1.24E-54 T 13-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VEA_002562 d14b9e4f9bb44930cd5766263a54296d 161 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VEA_002562 d14b9e4f9bb44930cd5766263a54296d 161 Gene3D G3DSA:3.30.70.560 1 159 3.8E-60 T 13-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VEA_001359 ed2403d368ac8e88af1063f9c9a062cb 178 SUPERFAMILY SSF89028 7 169 2.75E-37 T 13-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 VEA_001359 ed2403d368ac8e88af1063f9c9a062cb 178 Pfam PF01923 Cobalamin adenosyltransferase 19 156 7.1E-16 T 13-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 VEA_001359 ed2403d368ac8e88af1063f9c9a062cb 178 Gene3D G3DSA:1.20.1200.10 17 173 4.5E-24 T 13-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 VEA_001359 ed2403d368ac8e88af1063f9c9a062cb 178 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 28 149 6.0E-61 T 13-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 VEA_003230 5f12621b8fa9651d4273207d78471fb7 166 Gene3D G3DSA:3.40.630.30 3 166 9.9E-33 T 13-10-2018 VEA_003230 5f12621b8fa9651d4273207d78471fb7 166 Pfam PF13420 Acetyltransferase (GNAT) domain 5 161 1.9E-15 T 13-10-2018 VEA_003230 5f12621b8fa9651d4273207d78471fb7 166 SUPERFAMILY SSF55729 3 165 1.29E-29 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_003635 d8444e2fd439198eb176f649e4908dba 309 Gene3D G3DSA:3.40.190.10 116 240 3.3E-26 T 13-10-2018 VEA_003635 d8444e2fd439198eb176f649e4908dba 309 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 31 290 6.2E-50 T 13-10-2018 VEA_003635 d8444e2fd439198eb176f649e4908dba 309 SUPERFAMILY SSF53850 24 274 5.12E-24 T 13-10-2018 VEA_003635 d8444e2fd439198eb176f649e4908dba 309 Gene3D G3DSA:3.40.190.10 31 271 3.3E-26 T 13-10-2018 VEA_004307 fdf7221f7b3adbf8e46060efba12c969 190 SMART SM00857 3 145 4.0E-49 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VEA_004307 fdf7221f7b3adbf8e46060efba12c969 190 Pfam PF00239 Resolvase, N terminal domain 4 145 9.0E-37 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VEA_004307 fdf7221f7b3adbf8e46060efba12c969 190 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 13-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 VEA_004307 fdf7221f7b3adbf8e46060efba12c969 190 SUPERFAMILY SSF53041 1 145 3.79E-38 T 13-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 VEA_004307 fdf7221f7b3adbf8e46060efba12c969 190 ProSitePatterns PS00398 Site-specific recombinases signature 2. 63 75 - T 13-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 VEA_004307 fdf7221f7b3adbf8e46060efba12c969 190 Gene3D G3DSA:3.40.50.1390 2 145 2.5E-36 T 13-10-2018 VEA_003686 2de4dc59fc62f45d6906bb54a34503e4 254 SUPERFAMILY SSF52540 15 231 4.94E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003686 2de4dc59fc62f45d6906bb54a34503e4 254 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 1 254 42.974 T 13-10-2018 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 VEA_003686 2de4dc59fc62f45d6906bb54a34503e4 254 SMART SM00382 21 216 1.8E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_003686 2de4dc59fc62f45d6906bb54a34503e4 254 Gene3D G3DSA:3.40.50.300 6 253 1.4E-50 T 13-10-2018 VEA_003686 2de4dc59fc62f45d6906bb54a34503e4 254 Pfam PF00005 ABC transporter 14 167 1.6E-19 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_001616 87b1692afd35fa6dd15560b7c2193163 162 Gene3D G3DSA:3.30.70.560 1 153 2.1E-33 T 13-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VEA_001616 87b1692afd35fa6dd15560b7c2193163 162 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 129 1.4E-24 T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VEA_001616 87b1692afd35fa6dd15560b7c2193163 162 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 129 2.9E-29 T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VEA_001616 87b1692afd35fa6dd15560b7c2193163 162 SUPERFAMILY SSF55083 1 148 4.19E-37 T 13-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VEA_002094 9619d176ff63693c4af0846f70ba825f 245 Hamap MF_02088 Probable queuosine precursor transporter. 30 237 15.432 T 13-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 VEA_002094 9619d176ff63693c4af0846f70ba825f 245 Pfam PF02592 Putative vitamin uptake transporter 66 222 9.7E-38 T 13-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 VEA_002094 9619d176ff63693c4af0846f70ba825f 245 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 36 227 5.5E-62 T 13-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 VEA_003535 cc98668018141ba45947c480a7ac91c3 394 SUPERFAMILY SSF53756 7 370 5.38E-68 T 13-10-2018 VEA_003535 cc98668018141ba45947c480a7ac91c3 394 Pfam PF00534 Glycosyl transferases group 1 184 347 2.1E-33 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 VEA_003535 cc98668018141ba45947c480a7ac91c3 394 Pfam PF13439 Glycosyltransferase Family 4 18 173 9.4E-16 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 VEA_003535 cc98668018141ba45947c480a7ac91c3 394 Gene3D G3DSA:3.40.50.2000 19 363 7.8E-61 T 13-10-2018 VEA_003535 cc98668018141ba45947c480a7ac91c3 394 Gene3D G3DSA:3.40.50.2000 172 353 7.8E-61 T 13-10-2018 VEA_002824 07ccde87aebcaadeb1d6ae9ddd3432cb 137 Pfam PF04347 Flagellar biosynthesis protein, FliO 54 131 7.4E-20 T 13-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 VEA_002824 07ccde87aebcaadeb1d6ae9ddd3432cb 137 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 42 109 1.2E-22 T 13-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 VEA_003587 ac8f8fff737b3c116fbca04443da1317 155 Pfam PF13673 Acetyltransferase (GNAT) domain 29 142 9.7E-20 T 13-10-2018 IPR000182 GNAT domain VEA_003587 ac8f8fff737b3c116fbca04443da1317 155 SUPERFAMILY SSF55729 1 151 3.71E-35 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_003587 ac8f8fff737b3c116fbca04443da1317 155 Gene3D G3DSA:3.40.630.30 1 154 5.5E-41 T 13-10-2018 VEA_002715 000d2b99f0c6c63d11f5fa009d34e179 77 Pfam PF10982 Protein of unknown function (DUF2789) 1 75 1.0E-31 T 13-10-2018 IPR021250 Protein of unknown function DUF2789 VEA_002715 000d2b99f0c6c63d11f5fa009d34e179 77 Gene3D G3DSA:1.10.10.1130 1 77 1.0E-31 T 13-10-2018 VEA_002422 6920cb9d8301983ec84ab47728a7ed7b 137 Pfam PF06877 Regulator of ribonuclease activity B 18 120 1.7E-34 T 13-10-2018 IPR009671 Regulator of ribonuclease activity B domain VEA_002422 6920cb9d8301983ec84ab47728a7ed7b 137 Gene3D G3DSA:3.30.70.970 1 131 4.6E-59 T 13-10-2018 IPR036701 RraB-like superfamily VEA_002422 6920cb9d8301983ec84ab47728a7ed7b 137 SUPERFAMILY SSF89946 8 126 2.35E-39 T 13-10-2018 IPR036701 RraB-like superfamily VEA_002422 6920cb9d8301983ec84ab47728a7ed7b 137 PIRSF PIRSF018193 8 137 4.0E-58 T 13-10-2018 IPR016716 Regulator of ribonuclease activity B VEA_002422 6920cb9d8301983ec84ab47728a7ed7b 137 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 11 124 29.881 T 13-10-2018 IPR016716 Regulator of ribonuclease activity B VEA_000694 2afa7c525b2784b54ba8664f89f234c8 259 SUPERFAMILY SSF53335 53 228 1.67E-12 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_000694 2afa7c525b2784b54ba8664f89f234c8 259 Gene3D G3DSA:3.40.50.150 51 256 8.3E-11 T 13-10-2018 VEA_000694 2afa7c525b2784b54ba8664f89f234c8 259 Pfam PF13489 Methyltransferase domain 64 217 1.4E-6 T 13-10-2018 VEA_000274 389fab358f7779d1165ddeae4fe37c36 701 SUPERFAMILY SSF89260 524 619 3.01E-5 T 13-10-2018 VEA_000274 389fab358f7779d1165ddeae4fe37c36 701 Gene3D G3DSA:3.10.170.10 210 362 3.9E-61 T 13-10-2018 VEA_000274 389fab358f7779d1165ddeae4fe37c36 701 Gene3D G3DSA:2.60.120.380 523 623 3.6E-31 T 13-10-2018 VEA_000274 389fab358f7779d1165ddeae4fe37c36 701 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 542 610 2.4E-13 T 13-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial VEA_000274 389fab358f7779d1165ddeae4fe37c36 701 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 220 358 6.0E-38 T 13-10-2018 IPR013856 Peptidase M4 domain GO:0004222 VEA_000274 389fab358f7779d1165ddeae4fe37c36 701 SUPERFAMILY SSF55486 211 507 4.03E-82 T 13-10-2018 VEA_000274 389fab358f7779d1165ddeae4fe37c36 701 Pfam PF03413 Peptidase propeptide and YPEB domain 158 204 4.1E-6 T 13-10-2018 IPR025711 PepSY domain VEA_000274 389fab358f7779d1165ddeae4fe37c36 701 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 361 506 1.9E-37 T 13-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 VEA_000274 389fab358f7779d1165ddeae4fe37c36 701 Gene3D G3DSA:1.10.390.10 363 510 8.5E-50 T 13-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily VEA_000274 389fab358f7779d1165ddeae4fe37c36 701 Gene3D G3DSA:3.10.450.490 30 125 5.9E-24 T 13-10-2018 VEA_000274 389fab358f7779d1165ddeae4fe37c36 701 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 71 115 4.5E-15 T 13-10-2018 IPR011096 FTP domain VEA_000274 389fab358f7779d1165ddeae4fe37c36 701 Gene3D G3DSA:3.10.450.40 126 209 2.4E-21 T 13-10-2018 VEA_000274 389fab358f7779d1165ddeae4fe37c36 701 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 370 381 2.3E-25 T 13-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 VEA_000274 389fab358f7779d1165ddeae4fe37c36 701 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 433 449 2.3E-25 T 13-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 VEA_000274 389fab358f7779d1165ddeae4fe37c36 701 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 315 335 2.3E-25 T 13-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 VEA_000274 389fab358f7779d1165ddeae4fe37c36 701 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 349 365 2.3E-25 T 13-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 VEA_001333 f08840cb14a77f50e5d200438f98a412 301 SUPERFAMILY SSF103481 211 282 5.36E-10 T 13-10-2018 VEA_001333 f08840cb14a77f50e5d200438f98a412 301 Pfam PF00892 EamA-like transporter family 151 280 8.3E-18 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEA_001333 f08840cb14a77f50e5d200438f98a412 301 Pfam PF00892 EamA-like transporter family 3 135 1.3E-19 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEA_001333 f08840cb14a77f50e5d200438f98a412 301 SUPERFAMILY SSF103481 35 138 3.53E-11 T 13-10-2018 VEA_003666 3734b76386c3bcf78278f1244fd622ed 282 Gene3D G3DSA:1.10.3720.10 13 278 5.3E-51 T 13-10-2018 IPR035906 MetI-like superfamily VEA_003666 3734b76386c3bcf78278f1244fd622ed 282 SUPERFAMILY SSF161098 12 279 1.31E-55 T 13-10-2018 IPR035906 MetI-like superfamily VEA_003666 3734b76386c3bcf78278f1244fd622ed 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 265 2.7E-17 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_004028 d93b6bb98ac78f36736501cf3d31376f 475 Gene3D G3DSA:3.30.300.30 373 470 1.0E-14 T 13-10-2018 VEA_004028 d93b6bb98ac78f36736501cf3d31376f 475 SUPERFAMILY SSF56801 13 469 6.93E-81 T 13-10-2018 VEA_004028 d93b6bb98ac78f36736501cf3d31376f 475 ProSitePatterns PS00455 Putative AMP-binding domain signature. 160 171 - T 13-10-2018 IPR020845 AMP-binding, conserved site VEA_004028 d93b6bb98ac78f36736501cf3d31376f 475 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 35 465 1.1E-127 T 13-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 VEA_004028 d93b6bb98ac78f36736501cf3d31376f 475 Pfam PF00501 AMP-binding enzyme 16 377 5.2E-48 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VEA_004028 d93b6bb98ac78f36736501cf3d31376f 475 Gene3D G3DSA:3.40.50.12780 9 372 1.6E-61 T 13-10-2018 VEA_002897 b9e1bb48ffa5a6ffe5a3eff85bc390ea 146 Pfam PF03692 Putative zinc- or iron-chelating domain 23 91 1.2E-8 T 13-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein VEA_002897 b9e1bb48ffa5a6ffe5a3eff85bc390ea 146 PIRSF PIRSF006173 1 144 1.6E-65 T 13-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 VEA_002897 b9e1bb48ffa5a6ffe5a3eff85bc390ea 146 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 1 144 41.444 T 13-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 VEA_002258 6339402869646fb25c0eb6f921496fc3 310 Gene3D G3DSA:3.40.50.300 12 292 1.0E-108 T 13-10-2018 VEA_002258 6339402869646fb25c0eb6f921496fc3 310 Pfam PF01715 IPP transferase 42 287 5.4E-86 T 13-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 VEA_002258 6339402869646fb25c0eb6f921496fc3 310 SUPERFAMILY SSF52540 10 153 2.86E-19 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002258 6339402869646fb25c0eb6f921496fc3 310 Gene3D G3DSA:1.10.20.140 115 186 1.0E-108 T 13-10-2018 VEA_002258 6339402869646fb25c0eb6f921496fc3 310 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 8 301 30.251 T 13-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 VEA_002258 6339402869646fb25c0eb6f921496fc3 310 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 9 295 2.5E-115 T 13-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 VEA_003231 30a02ec30d5264a3e6d1eef8b9d091df 284 Pfam PF13280 WYL domain 123 201 6.5E-12 T 13-10-2018 IPR026881 WYL domain VEA_003231 30a02ec30d5264a3e6d1eef8b9d091df 284 PIRSF PIRSF015558 1 284 5.0E-95 T 13-10-2018 IPR016634 WYL domain protein, s026 type VEA_001425 48092648a73644b13a30a29b7f2762d9 223 Pfam PF06912 Protein of unknown function (DUF1275) 13 208 1.7E-29 T 13-10-2018 IPR010699 Protein of unknown function DUF1275 VEA_002085 8776e63fc4c456048097a513c060a71d 87 Pfam PF10048 Predicted integral membrane protein (DUF2282) 34 83 2.3E-23 T 13-10-2018 IPR018740 Protein of unknown function DUF2282, integral membrane VEA_001748 0f4a2775196802a6245791454f8d5ad0 156 Pfam PF00227 Proteasome subunit 2 142 4.0E-15 T 13-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 VEA_001748 0f4a2775196802a6245791454f8d5ad0 156 SUPERFAMILY SSF56235 1 145 5.52E-44 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VEA_001748 0f4a2775196802a6245791454f8d5ad0 156 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 1 145 2.6E-72 T 13-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 VEA_001748 0f4a2775196802a6245791454f8d5ad0 156 Gene3D G3DSA:3.60.20.10 1 146 4.5E-52 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VEA_003143 16fbd8e04f8d456060f17410f8dfd522 396 Gene3D G3DSA:3.40.640.10 60 300 1.5E-159 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_003143 16fbd8e04f8d456060f17410f8dfd522 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 13-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 VEA_003143 16fbd8e04f8d456060f17410f8dfd522 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 1.6E-38 T 13-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VEA_003143 16fbd8e04f8d456060f17410f8dfd522 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 1.6E-38 T 13-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VEA_003143 16fbd8e04f8d456060f17410f8dfd522 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 1.6E-38 T 13-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VEA_003143 16fbd8e04f8d456060f17410f8dfd522 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 1.6E-38 T 13-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VEA_003143 16fbd8e04f8d456060f17410f8dfd522 396 Pfam PF00155 Aminotransferase class I and II 27 391 1.1E-83 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VEA_003143 16fbd8e04f8d456060f17410f8dfd522 396 Gene3D G3DSA:3.90.1150.10 5 392 1.5E-159 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEA_003143 16fbd8e04f8d456060f17410f8dfd522 396 SUPERFAMILY SSF53383 1 395 9.85E-113 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_000369 c16af2ab6e52e850eaf2e0ee55700279 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 198 4.1E-4 T 13-10-2018 VEA_000369 c16af2ab6e52e850eaf2e0ee55700279 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 6.4E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000369 c16af2ab6e52e850eaf2e0ee55700279 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 6.4E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000369 c16af2ab6e52e850eaf2e0ee55700279 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 6.4E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000369 c16af2ab6e52e850eaf2e0ee55700279 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 5.0E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000369 c16af2ab6e52e850eaf2e0ee55700279 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.0E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000369 c16af2ab6e52e850eaf2e0ee55700279 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 5.0E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000369 c16af2ab6e52e850eaf2e0ee55700279 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 5.0E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000369 c16af2ab6e52e850eaf2e0ee55700279 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 5.0E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000369 c16af2ab6e52e850eaf2e0ee55700279 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 5.0E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000369 c16af2ab6e52e850eaf2e0ee55700279 252 SUPERFAMILY SSF51735 1 252 9.08E-67 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_000369 c16af2ab6e52e850eaf2e0ee55700279 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 1.1E-51 T 13-10-2018 VEA_000369 c16af2ab6e52e850eaf2e0ee55700279 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VEA_000369 c16af2ab6e52e850eaf2e0ee55700279 252 Gene3D G3DSA:3.40.50.720 1 252 7.5E-71 T 13-10-2018 VEA_002825 c2684855fc89a841e409309bd08d8a1a 289 Pfam PF00813 FliP family 92 283 2.5E-79 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VEA_002825 c2684855fc89a841e409309bd08d8a1a 289 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 264 276 - T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VEA_002825 c2684855fc89a841e409309bd08d8a1a 289 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 216 231 - T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VEA_002825 c2684855fc89a841e409309bd08d8a1a 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 109 129 4.2E-66 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VEA_002825 c2684855fc89a841e409309bd08d8a1a 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 90 109 4.2E-66 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VEA_002825 c2684855fc89a841e409309bd08d8a1a 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 261 286 4.2E-66 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VEA_002825 c2684855fc89a841e409309bd08d8a1a 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 237 258 4.2E-66 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VEA_002825 c2684855fc89a841e409309bd08d8a1a 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 216 236 4.2E-66 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VEA_002825 c2684855fc89a841e409309bd08d8a1a 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 129 148 4.2E-66 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VEA_002825 c2684855fc89a841e409309bd08d8a1a 289 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 92 287 1.6E-82 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VEA_002825 c2684855fc89a841e409309bd08d8a1a 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 209 221 3.1E-17 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VEA_002825 c2684855fc89a841e409309bd08d8a1a 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 160 174 3.1E-17 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VEA_002825 c2684855fc89a841e409309bd08d8a1a 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 188 200 3.1E-17 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VEA_002825 c2684855fc89a841e409309bd08d8a1a 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 277 287 3.1E-17 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VEA_002825 c2684855fc89a841e409309bd08d8a1a 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 148 160 3.1E-17 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VEA_002825 c2684855fc89a841e409309bd08d8a1a 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 88 97 3.1E-17 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VEA_001057 b296fe7ab5f7c2353d052d9f66abbf25 148 Gene3D G3DSA:3.30.310.70 23 145 3.7E-14 T 13-10-2018 IPR035923 TT1751-like domain superfamily VEA_001057 b296fe7ab5f7c2353d052d9f66abbf25 148 Pfam PF03625 Domain of unknown function DUF302 54 116 3.3E-20 T 13-10-2018 IPR005180 Domain of unknown function DUF302 VEA_001057 b296fe7ab5f7c2353d052d9f66abbf25 148 SUPERFAMILY SSF103247 24 146 1.83E-34 T 13-10-2018 IPR035923 TT1751-like domain superfamily VEA_001976 7b866004f45700b8cc930821893b551a 241 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 209 1.1E-21 T 13-10-2018 VEA_001976 7b866004f45700b8cc930821893b551a 241 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 99 209 3.2E-8 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEA_001976 7b866004f45700b8cc930821893b551a 241 SUPERFAMILY SSF56784 3 237 1.49E-41 T 13-10-2018 IPR036412 HAD-like superfamily VEA_001976 7b866004f45700b8cc930821893b551a 241 Gene3D G3DSA:3.40.50.1000 3 232 6.3E-58 T 13-10-2018 IPR023214 HAD superfamily VEA_001976 7b866004f45700b8cc930821893b551a 241 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 97 203 2.0E-11 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VEA_001976 7b866004f45700b8cc930821893b551a 241 Gene3D G3DSA:1.20.120.710 15 109 6.3E-58 T 13-10-2018 VEA_001501 1fc89046037a28b0be2bc690cf2bea93 70 PRINTS PR00050 Cold shock protein signature 43 61 1.7E-16 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEA_001501 1fc89046037a28b0be2bc690cf2bea93 70 PRINTS PR00050 Cold shock protein signature 7 22 1.7E-16 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEA_001501 1fc89046037a28b0be2bc690cf2bea93 70 PRINTS PR00050 Cold shock protein signature 28 37 1.7E-16 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEA_001501 1fc89046037a28b0be2bc690cf2bea93 70 SUPERFAMILY SSF50249 3 69 6.21E-25 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_001501 1fc89046037a28b0be2bc690cf2bea93 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 69 2.5E-28 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEA_001501 1fc89046037a28b0be2bc690cf2bea93 70 SMART SM00357 6 70 3.6E-30 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 VEA_001501 1fc89046037a28b0be2bc690cf2bea93 70 PIRSF PIRSF002599 1 70 2.3E-24 T 13-10-2018 IPR012156 Cold shock, CspA GO:0003676 VEA_001501 1fc89046037a28b0be2bc690cf2bea93 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 13-10-2018 IPR019844 Cold-shock conserved site VEA_001501 1fc89046037a28b0be2bc690cf2bea93 70 Gene3D G3DSA:2.40.50.140 2 70 1.9E-28 T 13-10-2018 VEA_002936 ed29288ecc888dbcf5e5fddca18c4c53 209 Pfam PF13743 Thioredoxin 6 175 2.8E-22 T 13-10-2018 VEA_002936 ed29288ecc888dbcf5e5fddca18c4c53 209 Gene3D G3DSA:3.40.30.10 1 208 4.0E-58 T 13-10-2018 VEA_002936 ed29288ecc888dbcf5e5fddca18c4c53 209 SUPERFAMILY SSF52833 1 184 8.75E-36 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VEA_000537 2e6fa075635c269bc794ef957a4e5d98 365 Gene3D G3DSA:3.40.50.2300 33 363 2.7E-150 T 13-10-2018 VEA_000537 2e6fa075635c269bc794ef957a4e5d98 365 Gene3D G3DSA:3.40.50.2300 180 359 2.7E-150 T 13-10-2018 VEA_000537 2e6fa075635c269bc794ef957a4e5d98 365 SUPERFAMILY SSF53822 27 364 3.46E-84 T 13-10-2018 IPR028082 Periplasmic binding protein-like I VEA_000537 2e6fa075635c269bc794ef957a4e5d98 365 Pfam PF13407 Periplasmic binding protein domain 69 324 3.1E-13 T 13-10-2018 IPR025997 Periplasmic binding protein VEA_001465 1524bbe90f0dfcc581df7b1cbafff36d 411 Pfam PF02687 FtsX-like permease family 299 403 2.6E-11 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VEA_001465 1524bbe90f0dfcc581df7b1cbafff36d 411 Pfam PF12704 MacB-like periplasmic core domain 19 230 1.3E-16 T 13-10-2018 IPR025857 MacB-like periplasmic core domain VEA_001821 5373ce545e18b191315d848f909aa3a2 224 SUPERFAMILY SSF102712 134 192 5.89E-5 T 13-10-2018 VEA_001821 5373ce545e18b191315d848f909aa3a2 224 Pfam PF04002 RadC-like JAB domain 104 222 4.7E-45 T 13-10-2018 IPR025657 RadC-like JAB domain VEA_001821 5373ce545e18b191315d848f909aa3a2 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 4.4E-77 T 13-10-2018 IPR001405 Uncharacterised protein family UPF0758 VEA_001821 5373ce545e18b191315d848f909aa3a2 224 Gene3D G3DSA:1.10.150.20 36 87 3.4E-5 T 13-10-2018 VEA_001821 5373ce545e18b191315d848f909aa3a2 224 Gene3D G3DSA:3.40.140.10 102 224 2.9E-43 T 13-10-2018 VEA_001821 5373ce545e18b191315d848f909aa3a2 224 SUPERFAMILY SSF47781 17 91 1.43E-11 T 13-10-2018 IPR010994 RuvA domain 2-like VEA_001821 5373ce545e18b191315d848f909aa3a2 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 13-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site VEA_001617 643aec51db6c0d19cc962784a9d25157 119 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 116 4.5E-30 T 13-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 VEA_001617 643aec51db6c0d19cc962784a9d25157 119 SUPERFAMILY SSF55620 3 117 6.67E-37 T 13-10-2018 VEA_001617 643aec51db6c0d19cc962784a9d25157 119 Pfam PF02152 Dihydroneopterin aldolase 6 115 4.0E-32 T 13-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 VEA_001617 643aec51db6c0d19cc962784a9d25157 119 TIGRFAM TIGR00526 folB_dom: FolB domain 4 117 3.9E-36 T 13-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 VEA_001617 643aec51db6c0d19cc962784a9d25157 119 SMART SM00905 6 116 3.6E-48 T 13-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 VEA_001617 643aec51db6c0d19cc962784a9d25157 119 Gene3D G3DSA:3.30.1130.10 1 118 3.4E-45 T 13-10-2018 VEA_001129 e21e78c3c20034f1ffb9addf159340a8 104 SUPERFAMILY SSF55729 3 96 6.65E-18 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_001129 e21e78c3c20034f1ffb9addf159340a8 104 Gene3D G3DSA:3.40.630.30 1 101 4.5E-20 T 13-10-2018 VEA_001129 e21e78c3c20034f1ffb9addf159340a8 104 Pfam PF00583 Acetyltransferase (GNAT) family 4 90 1.8E-14 T 13-10-2018 IPR000182 GNAT domain VEA_004503 d3d910d833113b5c66aa23ac3ab32788 196 Pfam PF13580 SIS domain 9 144 1.9E-34 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VEA_004503 d3d910d833113b5c66aa23ac3ab32788 196 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 34.331 T 13-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 VEA_004503 d3d910d833113b5c66aa23ac3ab32788 196 Gene3D G3DSA:3.40.50.10490 1 195 2.7E-72 T 13-10-2018 VEA_004503 d3d910d833113b5c66aa23ac3ab32788 196 SUPERFAMILY SSF53697 1 191 1.44E-56 T 13-10-2018 VEA_004396 a8f3de94dbd9fc8328faf910405c04f9 502 SMART SM00062 43 280 1.2E-17 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEA_004396 a8f3de94dbd9fc8328faf910405c04f9 502 Pfam PF01464 Transglycosylase SLT domain 302 414 7.3E-22 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 VEA_004396 a8f3de94dbd9fc8328faf910405c04f9 502 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 53 263 2.5E-26 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEA_004396 a8f3de94dbd9fc8328faf910405c04f9 502 Gene3D G3DSA:3.40.190.10 132 236 9.3E-50 T 13-10-2018 VEA_004396 a8f3de94dbd9fc8328faf910405c04f9 502 Gene3D G3DSA:3.40.190.10 38 268 9.3E-50 T 13-10-2018 VEA_004396 a8f3de94dbd9fc8328faf910405c04f9 502 SUPERFAMILY SSF53955 297 456 2.72E-37 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily VEA_004396 a8f3de94dbd9fc8328faf910405c04f9 502 SUPERFAMILY SSF53850 43 280 4.64E-37 T 13-10-2018 VEA_004396 a8f3de94dbd9fc8328faf910405c04f9 502 Gene3D G3DSA:1.10.530.10 296 464 5.4E-40 T 13-10-2018 VEA_000059 d60e60a1e470fd90a77b78af6425963a 309 Pfam PF05235 CHAD domain 30 252 7.9E-45 T 13-10-2018 IPR007899 CHAD domain VEA_000059 d60e60a1e470fd90a77b78af6425963a 309 SMART SM00880 24 287 4.3E-25 T 13-10-2018 IPR007899 CHAD domain VEA_000059 d60e60a1e470fd90a77b78af6425963a 309 Gene3D G3DSA:1.40.20.10 3 309 4.1E-60 T 13-10-2018 IPR038186 CHAD domain superfamily VEA_004212 016ba7322e0f36b0d7c15c8a595c3024 365 Pfam PF02562 PhoH-like protein 120 323 2.5E-93 T 13-10-2018 IPR003714 PhoH-like protein GO:0005524 VEA_004212 016ba7322e0f36b0d7c15c8a595c3024 365 SUPERFAMILY SSF52540 119 320 6.54E-40 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_004212 016ba7322e0f36b0d7c15c8a595c3024 365 Gene3D G3DSA:3.40.50.300 117 323 2.7E-72 T 13-10-2018 VEA_004124 ed05cc3f6b18e2ca8800a737e5b7042f 177 TIGRFAM TIGR01752 flav_long: flavodoxin 4 170 6.4E-71 T 13-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 VEA_004124 ed05cc3f6b18e2ca8800a737e5b7042f 177 SUPERFAMILY SSF52218 4 172 5.12E-51 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VEA_004124 ed05cc3f6b18e2ca8800a737e5b7042f 177 Pfam PF00258 Flavodoxin 6 162 1.8E-32 T 13-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VEA_004124 ed05cc3f6b18e2ca8800a737e5b7042f 177 PIRSF PIRSF038996 1 174 1.7E-66 T 13-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 VEA_004124 ed05cc3f6b18e2ca8800a737e5b7042f 177 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 13-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 VEA_004124 ed05cc3f6b18e2ca8800a737e5b7042f 177 Gene3D G3DSA:3.40.50.360 3 176 3.3E-55 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VEA_003465 805be1d852875e82a81eec13542214a0 393 SMART SM00897 27 222 3.2E-31 T 13-10-2018 IPR013702 FIST domain, N-terminal VEA_003465 805be1d852875e82a81eec13542214a0 393 Pfam PF10442 FIST C domain 223 369 7.1E-20 T 13-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 VEA_003465 805be1d852875e82a81eec13542214a0 393 SMART SM01204 223 370 1.6E-28 T 13-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 VEA_003465 805be1d852875e82a81eec13542214a0 393 Pfam PF08495 FIST N domain 32 221 1.6E-22 T 13-10-2018 IPR013702 FIST domain, N-terminal VEA_004067 26f2a6414188d991931f7c8729d0c948 466 Gene3D G3DSA:3.30.300.30 357 463 2.8E-16 T 13-10-2018 VEA_004067 26f2a6414188d991931f7c8729d0c948 466 Gene3D G3DSA:3.40.50.12780 9 328 1.4E-25 T 13-10-2018 VEA_004067 26f2a6414188d991931f7c8729d0c948 466 SUPERFAMILY SSF56801 17 465 2.22E-57 T 13-10-2018 VEA_004067 26f2a6414188d991931f7c8729d0c948 466 Pfam PF00501 AMP-binding enzyme 19 318 9.9E-20 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VEA_004067 26f2a6414188d991931f7c8729d0c948 466 Pfam PF13193 AMP-binding enzyme C-terminal domain 372 455 7.7E-7 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VEA_002768 2bffa28e656edf91b573209c3c1fb9ec 228 Pfam PF06930 Protein of unknown function (DUF1282) 14 223 1.5E-40 T 13-10-2018 IPR009698 Protein of unknown function DUF1282 VEA_002395 232d07916afe1921cf9cf5dddc46dc5f 320 SUPERFAMILY SSF51735 103 290 4.49E-52 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_002395 232d07916afe1921cf9cf5dddc46dc5f 320 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 289 2.6E-55 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VEA_002395 232d07916afe1921cf9cf5dddc46dc5f 320 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 225 241 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VEA_002395 232d07916afe1921cf9cf5dddc46dc5f 320 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 35 319 4.3E-24 T 13-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VEA_002395 232d07916afe1921cf9cf5dddc46dc5f 320 SUPERFAMILY SSF52283 4 139 8.69E-33 T 13-10-2018 VEA_002395 232d07916afe1921cf9cf5dddc46dc5f 320 Gene3D G3DSA:3.40.50.720 27 317 2.3E-112 T 13-10-2018 VEA_002395 232d07916afe1921cf9cf5dddc46dc5f 320 Gene3D G3DSA:3.40.50.720 99 288 2.3E-112 T 13-10-2018 VEA_002395 232d07916afe1921cf9cf5dddc46dc5f 320 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 196 218 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VEA_000007 c1a61f4a64f78687c14a3a8cdc878503 397 Gene3D G3DSA:3.40.50.2300 1 134 1.2E-30 T 13-10-2018 VEA_000007 c1a61f4a64f78687c14a3a8cdc878503 397 Gene3D G3DSA:3.60.40.10 135 395 1.8E-56 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VEA_000007 c1a61f4a64f78687c14a3a8cdc878503 397 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 191 395 4.6E-41 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VEA_000007 c1a61f4a64f78687c14a3a8cdc878503 397 SMART SM00448 2 116 1.1E-32 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_000007 c1a61f4a64f78687c14a3a8cdc878503 397 Pfam PF00072 Response regulator receiver domain 4 117 2.3E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_000007 c1a61f4a64f78687c14a3a8cdc878503 397 SUPERFAMILY SSF52172 1 157 1.71E-33 T 13-10-2018 IPR011006 CheY-like superfamily VEA_000007 c1a61f4a64f78687c14a3a8cdc878503 397 SMART SM00331 164 395 1.6E-21 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VEA_000007 c1a61f4a64f78687c14a3a8cdc878503 397 SUPERFAMILY SSF81606 176 394 3.66E-7 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VEA_000074 6747e7f8dad95546ab7d426f3e0e0c8c 162 Gene3D G3DSA:3.40.50.1010 1 162 2.6E-61 T 13-10-2018 VEA_000074 6747e7f8dad95546ab7d426f3e0e0c8c 162 Pfam PF01936 NYN domain 8 156 6.3E-38 T 13-10-2018 IPR021139 NYN domain, limkain-b1-type VEA_002623 47d0a24b9aa1a0932982623dc61b59cb 136 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 56 128 1.0E-4 T 13-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_002623 47d0a24b9aa1a0932982623dc61b59cb 136 Gene3D G3DSA:3.40.50.10220 35 135 4.2E-28 T 13-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_002623 47d0a24b9aa1a0932982623dc61b59cb 136 PIRSF PIRSF029225 2 134 9.8E-43 T 13-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_002623 47d0a24b9aa1a0932982623dc61b59cb 136 SUPERFAMILY SSF102220 31 133 3.4E-30 T 13-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_002623 47d0a24b9aa1a0932982623dc61b59cb 136 Pfam PF03603 DNA polymerase III psi subunit 4 130 2.3E-37 T 13-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_000401 803294e186c423afc2e961dc46678f20 355 Pfam PF02653 Branched-chain amino acid transport system / permease component 50 330 1.5E-38 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VEA_003554 59d751f572020dbbfe6f5302f47928a2 146 SUPERFAMILY SSF158682 2 144 2.09E-28 T 13-10-2018 IPR029024 TerB-like VEA_003554 59d751f572020dbbfe6f5302f47928a2 146 Gene3D G3DSA:1.10.3680.10 3 139 4.7E-20 T 13-10-2018 IPR029024 TerB-like VEA_003554 59d751f572020dbbfe6f5302f47928a2 146 Pfam PF05099 Tellurite resistance protein TerB 18 143 7.3E-39 T 13-10-2018 IPR007791 Co-chaperone DjlA, N-terminal VEA_000511 0c416906241e51cb01554f81d47ced98 161 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 139 150 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VEA_000511 0c416906241e51cb01554f81d47ced98 161 SUPERFAMILY SSF54862 32 158 5.02E-19 T 13-10-2018 VEA_000511 0c416906241e51cb01554f81d47ced98 161 Gene3D G3DSA:3.30.70.20 30 81 6.3E-10 T 13-10-2018 VEA_000511 0c416906241e51cb01554f81d47ced98 161 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 18 154 4.0E-44 T 13-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 VEA_000511 0c416906241e51cb01554f81d47ced98 161 Hamap MF_02201 Ferredoxin-type protein NapF [napF]. 23 160 24.034 T 13-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 VEA_000511 0c416906241e51cb01554f81d47ced98 161 Gene3D G3DSA:3.30.70.20 95 158 1.2E-9 T 13-10-2018 VEA_000511 0c416906241e51cb01554f81d47ced98 161 Pfam PF12838 4Fe-4S dicluster domain 35 78 5.9E-8 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEA_000511 0c416906241e51cb01554f81d47ced98 161 Pfam PF12838 4Fe-4S dicluster domain 106 151 9.9E-8 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEA_001803 0fcfc30cd1d8f23380171d5336fac30d 396 Gene3D G3DSA:3.90.25.40 201 311 1.4E-159 T 13-10-2018 VEA_001803 0fcfc30cd1d8f23380171d5336fac30d 396 Pfam PF02719 Polysaccharide biosynthesis protein 36 283 1.7E-44 T 13-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain VEA_001803 0fcfc30cd1d8f23380171d5336fac30d 396 SUPERFAMILY SSF51735 34 308 1.02E-27 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_001803 0fcfc30cd1d8f23380171d5336fac30d 396 Gene3D G3DSA:3.40.50.720 9 370 1.4E-159 T 13-10-2018 VEA_002538 5135a4e3eca71d2d0e38efe658a8cf28 247 Gene3D G3DSA:3.40.1280.10 1 160 4.1E-67 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VEA_002538 5135a4e3eca71d2d0e38efe658a8cf28 247 SUPERFAMILY SSF75217 1 245 4.32E-102 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases VEA_002538 5135a4e3eca71d2d0e38efe658a8cf28 247 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 234 3.3E-109 T 13-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VEA_002538 5135a4e3eca71d2d0e38efe658a8cf28 247 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 1.3E-69 T 13-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VEA_002538 5135a4e3eca71d2d0e38efe658a8cf28 247 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 247 117.893 T 13-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VEA_002538 5135a4e3eca71d2d0e38efe658a8cf28 247 PIRSF PIRSF000386 1 246 2.7E-100 T 13-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VEA_002538 5135a4e3eca71d2d0e38efe658a8cf28 247 Gene3D G3DSA:1.10.1270.20 161 247 1.1E-34 T 13-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VEA_000130 15f67940e5d40e81a9d93edd6e3ab024 293 Pfam PF11060 Protein of unknown function (DUF2861) 22 288 5.3E-94 T 13-10-2018 IPR021290 Protein of unknown function DUF2861 VEA_000734 1a9b285d0b1c81a330249c7278680b0f 223 PRINTS PR01008 Flagellar L-ring protein signature 136 151 3.6E-22 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VEA_000734 1a9b285d0b1c81a330249c7278680b0f 223 PRINTS PR01008 Flagellar L-ring protein signature 183 197 3.6E-22 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VEA_000734 1a9b285d0b1c81a330249c7278680b0f 223 PRINTS PR01008 Flagellar L-ring protein signature 199 213 3.6E-22 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VEA_000734 1a9b285d0b1c81a330249c7278680b0f 223 PRINTS PR01008 Flagellar L-ring protein signature 162 178 3.6E-22 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VEA_000734 1a9b285d0b1c81a330249c7278680b0f 223 PRINTS PR01008 Flagellar L-ring protein signature 68 80 3.6E-22 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VEA_000734 1a9b285d0b1c81a330249c7278680b0f 223 Pfam PF02107 Flagellar L-ring protein 46 220 3.0E-60 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VEA_000734 1a9b285d0b1c81a330249c7278680b0f 223 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 220 25.342 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VEA_000893 5fc006ecce4414c7834dd62ba4e447e5 435 Gene3D G3DSA:2.60.40.1610 58 208 1.4E-9 T 13-10-2018 IPR037050 Domain of unknown function DUF1254 superfamily VEA_000893 5fc006ecce4414c7834dd62ba4e447e5 435 Gene3D G3DSA:1.10.3360.10 33 253 1.4E-9 T 13-10-2018 IPR023289 VPA0735-like domain superfamily VEA_000893 5fc006ecce4414c7834dd62ba4e447e5 435 Pfam PF06742 Protein of unknown function (DUF1214) 313 417 5.1E-25 T 13-10-2018 IPR010621 Domain of unknown function DUF1214 VEA_000893 5fc006ecce4414c7834dd62ba4e447e5 435 Gene3D G3DSA:2.60.120.1600 315 435 3.1E-45 T 13-10-2018 VEA_000893 5fc006ecce4414c7834dd62ba4e447e5 435 SUPERFAMILY SSF160935 6 434 4.97E-105 T 13-10-2018 VEA_000893 5fc006ecce4414c7834dd62ba4e447e5 435 Pfam PF06863 Protein of unknown function (DUF1254) 59 188 5.0E-30 T 13-10-2018 IPR010679 Domain of unknown function DUF1254 VEA_000167 0d60ab9a3d5aab3ae5f782cb4503ef4f 230 Pfam PF00005 ABC transporter 30 176 2.3E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_000167 0d60ab9a3d5aab3ae5f782cb4503ef4f 230 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_000167 0d60ab9a3d5aab3ae5f782cb4503ef4f 230 SMART SM00382 39 228 8.7E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_000167 0d60ab9a3d5aab3ae5f782cb4503ef4f 230 SUPERFAMILY SSF52540 12 228 1.69E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000167 0d60ab9a3d5aab3ae5f782cb4503ef4f 230 Gene3D G3DSA:3.40.50.300 9 230 1.0E-70 T 13-10-2018 VEA_002487 84c53f4b90174fcec910d0ec49c1dbea 148 Gene3D G3DSA:3.90.960.10 1 148 5.7E-41 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VEA_002487 84c53f4b90174fcec910d0ec49c1dbea 148 Pfam PF04073 Aminoacyl-tRNA editing domain 18 137 1.7E-31 T 13-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VEA_002487 84c53f4b90174fcec910d0ec49c1dbea 148 SUPERFAMILY SSF55826 2 147 7.06E-38 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VEA_003482 1c967d97bd7006c4bd9793abd8862035 286 Gene3D G3DSA:1.10.3720.10 7 278 5.8E-54 T 13-10-2018 IPR035906 MetI-like superfamily VEA_003482 1c967d97bd7006c4bd9793abd8862035 286 SUPERFAMILY SSF161098 10 275 9.81E-54 T 13-10-2018 IPR035906 MetI-like superfamily VEA_003482 1c967d97bd7006c4bd9793abd8862035 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 283 1.6E-19 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_001189 ad4dcbe048bcc529b6af00f979506ba9 448 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 13 445 5.3E-165 T 13-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEA_001189 ad4dcbe048bcc529b6af00f979506ba9 448 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 31 444 3.5E-189 T 13-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEA_001189 ad4dcbe048bcc529b6af00f979506ba9 448 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 356 365 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEA_001189 ad4dcbe048bcc529b6af00f979506ba9 448 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 154 365 3.6E-72 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEA_001189 ad4dcbe048bcc529b6af00f979506ba9 448 SMART SM00382 166 349 0.0014 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_001189 ad4dcbe048bcc529b6af00f979506ba9 448 SUPERFAMILY SSF52540 102 370 5.14E-94 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001189 ad4dcbe048bcc529b6af00f979506ba9 448 Gene3D G3DSA:3.40.50.12240 22 448 3.9E-150 T 13-10-2018 VEA_003043 0f8a75226f4ff3240f7fbacccb774a0c 141 Pfam PF00583 Acetyltransferase (GNAT) family 34 121 3.5E-12 T 13-10-2018 IPR000182 GNAT domain VEA_003043 0f8a75226f4ff3240f7fbacccb774a0c 141 Gene3D G3DSA:3.40.630.30 2 131 1.0E-38 T 13-10-2018 VEA_003043 0f8a75226f4ff3240f7fbacccb774a0c 141 SUPERFAMILY SSF55729 13 131 4.99E-25 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_001374 e3f795806e82f50969bdf09623dffbbb 125 SUPERFAMILY SSF69118 4 122 2.3E-35 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 VEA_001374 e3f795806e82f50969bdf09623dffbbb 125 Gene3D G3DSA:1.20.1290.10 3 125 1.1E-39 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 VEA_001374 e3f795806e82f50969bdf09623dffbbb 125 Pfam PF02627 Carboxymuconolactone decarboxylase family 33 118 1.4E-21 T 13-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 VEA_001481 f3f2e4a83166148bf619107b14109859 112 Gene3D G3DSA:3.30.1360.20 15 112 5.3E-33 T 13-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 VEA_001481 f3f2e4a83166148bf619107b14109859 112 SUPERFAMILY SSF55248 16 109 3.27E-34 T 13-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 VEA_001481 f3f2e4a83166148bf619107b14109859 112 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 14 109 22.087 T 13-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 VEA_001481 f3f2e4a83166148bf619107b14109859 112 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 16 107 5.4E-32 T 13-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 VEA_002597 2ade051270f847bbf033479fabaf344c 281 Gene3D G3DSA:1.10.357.20 94 278 1.2E-52 T 13-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain VEA_002597 2ade051270f847bbf033479fabaf344c 281 Pfam PF01769 Divalent cation transporter 142 271 8.5E-27 T 13-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VEA_002597 2ade051270f847bbf033479fabaf344c 281 SUPERFAMILY SSF161093 99 278 3.53E-44 T 13-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 VEA_001205 ad11c7edb76fd50fdc01d85c0654ea75 243 Pfam PF00486 Transcriptional regulatory protein, C terminal 164 239 2.2E-23 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEA_001205 ad11c7edb76fd50fdc01d85c0654ea75 243 Gene3D G3DSA:3.40.50.2300 2 130 1.9E-36 T 13-10-2018 VEA_001205 ad11c7edb76fd50fdc01d85c0654ea75 243 SMART SM00448 10 121 6.5E-38 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_001205 ad11c7edb76fd50fdc01d85c0654ea75 243 SUPERFAMILY SSF46894 142 240 1.42E-26 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEA_001205 ad11c7edb76fd50fdc01d85c0654ea75 243 SUPERFAMILY SSF52172 11 140 3.56E-38 T 13-10-2018 IPR011006 CheY-like superfamily VEA_001205 ad11c7edb76fd50fdc01d85c0654ea75 243 Pfam PF00072 Response regulator receiver domain 12 121 9.2E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_001205 ad11c7edb76fd50fdc01d85c0654ea75 243 SMART SM00862 163 239 5.2E-21 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEA_001205 ad11c7edb76fd50fdc01d85c0654ea75 243 Gene3D G3DSA:1.10.10.10 131 243 1.0E-31 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001319 6b57777d9669f7773158953fb0cd78d6 277 Pfam PF10364 Putative capsular polysaccharide synthesis protein 121 257 8.6E-58 T 13-10-2018 IPR018831 Uncharacterised protein family NKWYS VEA_001319 6b57777d9669f7773158953fb0cd78d6 277 Gene3D G3DSA:3.40.50.300 4 273 3.4E-5 T 13-10-2018 VEA_001319 6b57777d9669f7773158953fb0cd78d6 277 SUPERFAMILY SSF52540 18 246 1.68E-9 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001678 cdd5939bcf6de61b1be284f245ce5bd0 322 Pfam PF16868 NMT1-like family 30 319 1.6E-96 T 13-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family VEA_001678 cdd5939bcf6de61b1be284f245ce5bd0 322 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 7 319 7.0E-114 T 13-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family VEA_001678 cdd5939bcf6de61b1be284f245ce5bd0 322 Gene3D G3DSA:3.40.190.10 117 255 8.3E-111 T 13-10-2018 VEA_001678 cdd5939bcf6de61b1be284f245ce5bd0 322 Gene3D G3DSA:3.40.190.10 30 319 8.3E-111 T 13-10-2018 VEA_001678 cdd5939bcf6de61b1be284f245ce5bd0 322 SUPERFAMILY SSF53850 25 321 7.53E-89 T 13-10-2018 VEA_001868 8f825ed62a186ffd13c8df0e6ebb0b6a 462 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 17 444 5.9E-127 T 13-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 VEA_001868 8f825ed62a186ffd13c8df0e6ebb0b6a 462 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 362 382 - T 13-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 VEA_001868 8f825ed62a186ffd13c8df0e6ebb0b6a 462 Pfam PF00860 Permease family 22 414 5.7E-97 T 13-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 VEA_001868 8f825ed62a186ffd13c8df0e6ebb0b6a 462 TIGRFAM TIGR03173 pbuX: xanthine permease 27 446 5.4E-131 T 13-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 VEA_002465 8d981f337dc68d80d7677b61097e49f8 165 Hamap MF_00746 Protein SprT [sprT]. 7 160 42.65 T 13-10-2018 IPR023483 Uncharacterised protein family SprT VEA_002465 8d981f337dc68d80d7677b61097e49f8 165 Pfam PF17283 SprT-like zinc ribbon domain 120 160 1.1E-10 T 13-10-2018 IPR035240 SprT-like, zinc ribbon domain VEA_002465 8d981f337dc68d80d7677b61097e49f8 165 Pfam PF10263 SprT-like family 15 114 9.7E-19 T 13-10-2018 IPR006640 SprT-like VEA_002465 8d981f337dc68d80d7677b61097e49f8 165 SMART SM00731 11 160 3.2E-55 T 13-10-2018 IPR006640 SprT-like VEA_003177 e4cd00644bb7e8a2160766a39bce98d1 138 Gene3D G3DSA:3.40.630.30 1 131 4.2E-35 T 13-10-2018 VEA_003177 e4cd00644bb7e8a2160766a39bce98d1 138 Pfam PF13673 Acetyltransferase (GNAT) domain 25 126 7.6E-17 T 13-10-2018 IPR000182 GNAT domain VEA_003177 e4cd00644bb7e8a2160766a39bce98d1 138 SUPERFAMILY SSF55729 2 128 7.55E-28 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_004051 7630c9b6c079e322dad370626a9810a4 489 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 5 475 45.709 T 13-10-2018 IPR003846 Uncharacterised protein family UPF0061 VEA_004051 7630c9b6c079e322dad370626a9810a4 489 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 7 458 7.3E-157 T 13-10-2018 IPR003846 Uncharacterised protein family UPF0061 VEA_002688 3d6dbd34f433b3fea8bb0a646d95f107 445 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 445 223.598 T 13-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 VEA_002688 3d6dbd34f433b3fea8bb0a646d95f107 445 Gene3D G3DSA:3.40.630.30 297 445 1.4E-36 T 13-10-2018 VEA_002688 3d6dbd34f433b3fea8bb0a646d95f107 445 Pfam PF00583 Acetyltransferase (GNAT) family 333 416 4.2E-8 T 13-10-2018 IPR000182 GNAT domain VEA_002688 3d6dbd34f433b3fea8bb0a646d95f107 445 Gene3D G3DSA:3.40.1160.10 7 296 3.1E-84 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VEA_002688 3d6dbd34f433b3fea8bb0a646d95f107 445 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 8 444 9.7E-202 T 13-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 VEA_002688 3d6dbd34f433b3fea8bb0a646d95f107 445 PIRSF PIRSF000423 1 445 4.3E-204 T 13-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 VEA_002688 3d6dbd34f433b3fea8bb0a646d95f107 445 Pfam PF00696 Amino acid kinase family 25 270 8.7E-28 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VEA_002688 3d6dbd34f433b3fea8bb0a646d95f107 445 SUPERFAMILY SSF53633 4 294 1.13E-66 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VEA_002688 3d6dbd34f433b3fea8bb0a646d95f107 445 SUPERFAMILY SSF55729 300 425 6.73E-17 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_001980 02cdd26a735852758d92b02cef4b1b13 367 SUPERFAMILY SSF111369 57 272 5.89E-43 T 13-10-2018 VEA_001980 02cdd26a735852758d92b02cef4b1b13 367 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 352 2.0E-77 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VEA_001980 02cdd26a735852758d92b02cef4b1b13 367 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 57 268 1.5E-29 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VEA_001980 02cdd26a735852758d92b02cef4b1b13 367 Gene3D G3DSA:2.40.50.100 67 195 1.8E-75 T 13-10-2018 VEA_001980 02cdd26a735852758d92b02cef4b1b13 367 Gene3D G3DSA:1.10.287.470 102 161 1.8E-75 T 13-10-2018 VEA_001980 02cdd26a735852758d92b02cef4b1b13 367 Gene3D G3DSA:2.40.420.20 279 350 1.8E-75 T 13-10-2018 VEA_001980 02cdd26a735852758d92b02cef4b1b13 367 Gene3D G3DSA:2.40.30.170 57 278 1.8E-75 T 13-10-2018 VEA_001849 882847066b195b29ecec05a06fa6887f 141 Pfam PF06146 Phosphate-starvation-inducible E 51 117 9.1E-14 T 13-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like VEA_001849 882847066b195b29ecec05a06fa6887f 141 PIRSF PIRSF029598 3 135 1.8E-41 T 13-10-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 VEA_000788 544a0162083addca28d44a1ec109c0c3 1372 Pfam PF10462 Peptidase M66 584 623 7.8E-6 T 13-10-2018 IPR019503 Peptidase M66 domain GO:0004222 VEA_000788 544a0162083addca28d44a1ec109c0c3 1372 SUPERFAMILY SSF55486 490 660 4.27E-9 T 13-10-2018 VEA_000788 544a0162083addca28d44a1ec109c0c3 1372 Gene3D G3DSA:3.40.390.10 565 661 2.8E-8 T 13-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 VEA_000788 544a0162083addca28d44a1ec109c0c3 1372 SUPERFAMILY SSF55486 300 665 1.71E-17 T 13-10-2018 VEA_000115 f6a7ff735d4673728dafa6c0b10f67eb 124 Gene3D G3DSA:2.40.50.200 18 124 1.8E-16 T 13-10-2018 IPR036700 Bacterial OB-fold superfamily VEA_000115 f6a7ff735d4673728dafa6c0b10f67eb 124 SUPERFAMILY SSF101756 25 123 5.49E-22 T 13-10-2018 IPR036700 Bacterial OB-fold superfamily VEA_000115 f6a7ff735d4673728dafa6c0b10f67eb 124 Pfam PF04076 Bacterial OB fold (BOF) protein 51 121 3.3E-9 T 13-10-2018 IPR005220 Bacterial OB-fold VEA_001653 ecbe96a8a864ae1d348371cd35eed29a 182 SMART SM00014 71 177 1.4E-11 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VEA_001653 ecbe96a8a864ae1d348371cd35eed29a 182 SUPERFAMILY SSF48317 12 179 2.49E-36 T 13-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily VEA_001653 ecbe96a8a864ae1d348371cd35eed29a 182 Gene3D G3DSA:1.20.144.10 96 181 1.1E-17 T 13-10-2018 VEA_001653 ecbe96a8a864ae1d348371cd35eed29a 182 Pfam PF01569 PAP2 superfamily 67 179 6.9E-18 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VEA_001356 dadb8fdabce23d44d898b6517f9f74a1 456 Pfam PF04055 Radical SAM superfamily 67 237 5.3E-14 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VEA_001356 dadb8fdabce23d44d898b6517f9f74a1 456 TIGRFAM TIGR04107 rSAM_HutW: putative heme utilization radical SAM enzyme HutW 23 442 3.2E-180 T 13-10-2018 IPR026332 Putative heme utilization radical SAM enzyme HutW VEA_001356 dadb8fdabce23d44d898b6517f9f74a1 456 SMART SM00729 62 285 9.0E-42 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VEA_001356 dadb8fdabce23d44d898b6517f9f74a1 456 Gene3D G3DSA:3.80.30.20 37 364 2.1E-73 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VEA_001356 dadb8fdabce23d44d898b6517f9f74a1 456 SUPERFAMILY SSF102114 59 438 1.44E-82 T 13-10-2018 VEA_004081 2bbe11724d4c7ce8f98033e80c4ec860 286 SUPERFAMILY SSF53223 1 122 7.87E-40 T 13-10-2018 VEA_004081 2bbe11724d4c7ce8f98033e80c4ec860 286 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 13-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VEA_004081 2bbe11724d4c7ce8f98033e80c4ec860 286 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 9.1E-70 T 13-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VEA_004081 2bbe11724d4c7ce8f98033e80c4ec860 286 Gene3D G3DSA:3.40.50.720 6 259 1.3E-108 T 13-10-2018 VEA_004081 2bbe11724d4c7ce8f98033e80c4ec860 286 SUPERFAMILY SSF51735 123 280 2.39E-52 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_004081 2bbe11724d4c7ce8f98033e80c4ec860 286 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 38.154 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VEA_004081 2bbe11724d4c7ce8f98033e80c4ec860 286 Gene3D G3DSA:3.40.50.10860 8 276 1.3E-108 T 13-10-2018 VEA_004081 2bbe11724d4c7ce8f98033e80c4ec860 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 3.1E-89 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VEA_004081 2bbe11724d4c7ce8f98033e80c4ec860 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 3.1E-89 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VEA_004081 2bbe11724d4c7ce8f98033e80c4ec860 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 3.1E-89 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VEA_004081 2bbe11724d4c7ce8f98033e80c4ec860 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 3.1E-89 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VEA_004081 2bbe11724d4c7ce8f98033e80c4ec860 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 3.1E-89 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VEA_004081 2bbe11724d4c7ce8f98033e80c4ec860 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 3.1E-89 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VEA_004081 2bbe11724d4c7ce8f98033e80c4ec860 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 3.1E-89 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VEA_004081 2bbe11724d4c7ce8f98033e80c4ec860 286 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 121 9.0E-39 T 13-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VEA_004081 2bbe11724d4c7ce8f98033e80c4ec860 286 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 13-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VEA_002216 f4e4be27fffe83e233fc3691e3d1131e 159 SUPERFAMILY SSF75217 2 157 2.09E-43 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases VEA_002216 f4e4be27fffe83e233fc3691e3d1131e 159 PIRSF PIRSF029256 1 159 4.7E-67 T 13-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 VEA_002216 f4e4be27fffe83e233fc3691e3d1131e 159 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 157 2.3E-59 T 13-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 VEA_002216 f4e4be27fffe83e233fc3691e3d1131e 159 Gene3D G3DSA:3.40.1280.10 1 159 2.5E-65 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VEA_002216 f4e4be27fffe83e233fc3691e3d1131e 159 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 156 32.869 T 13-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 VEA_002216 f4e4be27fffe83e233fc3691e3d1131e 159 Pfam PF00588 SpoU rRNA Methylase family 3 146 2.8E-34 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VEA_001151 c47eaa8cc0eabf35a5d57ddda5daa537 156 SUPERFAMILY SSF55729 1 152 2.13E-20 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_001151 c47eaa8cc0eabf35a5d57ddda5daa537 156 Pfam PF00583 Acetyltransferase (GNAT) family 39 134 5.5E-10 T 13-10-2018 IPR000182 GNAT domain VEA_001151 c47eaa8cc0eabf35a5d57ddda5daa537 156 Gene3D G3DSA:3.40.630.30 2 155 6.4E-22 T 13-10-2018 VEA_003960 c89591d710a3ae23468579c58ec0170e 233 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 62 232 5.1E-58 T 13-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VEA_003960 c89591d710a3ae23468579c58ec0170e 233 Gene3D G3DSA:3.30.70.580 45 121 1.3E-26 T 13-10-2018 VEA_003960 c89591d710a3ae23468579c58ec0170e 233 Pfam PF00849 RNA pseudouridylate synthase 58 202 3.0E-16 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEA_003960 c89591d710a3ae23468579c58ec0170e 233 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 93 107 - T 13-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VEA_003960 c89591d710a3ae23468579c58ec0170e 233 SUPERFAMILY SSF55120 49 232 9.92E-46 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEA_003960 c89591d710a3ae23468579c58ec0170e 233 Gene3D G3DSA:3.30.70.1560 122 221 5.5E-39 T 13-10-2018 VEA_001326 427180815886c3837ec40a01181e0c96 466 Gene3D G3DSA:3.40.50.720 142 265 2.0E-10 T 13-10-2018 VEA_001326 427180815886c3837ec40a01181e0c96 466 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 22 466 7.4E-152 T 13-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase VEA_001326 427180815886c3837ec40a01181e0c96 466 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 25 466 1.2E-170 T 13-10-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 VEA_001326 427180815886c3837ec40a01181e0c96 466 Pfam PF13727 CoA-binding domain 66 240 3.9E-36 T 13-10-2018 VEA_001326 427180815886c3837ec40a01181e0c96 466 Pfam PF02397 Bacterial sugar transferase 276 458 6.5E-67 T 13-10-2018 IPR003362 Bacterial sugar transferase VEA_003953 0e24966b46d9c61fbe0fbbebaad9d0e1 235 Gene3D G3DSA:3.40.630.70 63 235 1.7E-61 T 13-10-2018 VEA_003953 0e24966b46d9c61fbe0fbbebaad9d0e1 235 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 37 224 6.3E-75 T 13-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 VEA_003953 0e24966b46d9c61fbe0fbbebaad9d0e1 235 SUPERFAMILY SSF55729 5 230 1.11E-86 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_003953 0e24966b46d9c61fbe0fbbebaad9d0e1 235 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 235 89.155 T 13-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 VEA_003953 0e24966b46d9c61fbe0fbbebaad9d0e1 235 Gene3D G3DSA:2.30.210.20 5 62 1.4E-22 T 13-10-2018 VEA_003953 0e24966b46d9c61fbe0fbbebaad9d0e1 235 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 37 204 2.9E-67 T 13-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 VEA_003840 441f8f111855df9755cff0e6d14e9590 404 SMART SM00052 2 195 0.0012 T 13-10-2018 IPR001633 EAL domain VEA_003840 441f8f111855df9755cff0e6d14e9590 404 SUPERFAMILY SSF109604 181 400 4.71E-43 T 13-10-2018 VEA_003840 441f8f111855df9755cff0e6d14e9590 404 Pfam PF08668 HDOD domain 205 325 1.1E-12 T 13-10-2018 IPR013976 Metal-dependent hydrolase HDOD VEA_003840 441f8f111855df9755cff0e6d14e9590 404 SUPERFAMILY SSF141868 5 193 2.35E-28 T 13-10-2018 IPR035919 EAL domain superfamily VEA_003840 441f8f111855df9755cff0e6d14e9590 404 PIRSF PIRSF003180 1 403 2.8E-170 T 13-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing VEA_003840 441f8f111855df9755cff0e6d14e9590 404 Gene3D G3DSA:1.10.3210.10 195 403 7.5E-22 T 13-10-2018 VEA_003840 441f8f111855df9755cff0e6d14e9590 404 Pfam PF00563 EAL domain 64 190 3.6E-15 T 13-10-2018 IPR001633 EAL domain VEA_003840 441f8f111855df9755cff0e6d14e9590 404 Gene3D G3DSA:3.20.20.450 3 194 6.8E-18 T 13-10-2018 IPR035919 EAL domain superfamily VEA_000415 0ba5f9913d83bf050c11c8ef8399351e 158 PIRSF PIRSF019239 1 158 8.1E-43 T 13-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 VEA_000415 0ba5f9913d83bf050c11c8ef8399351e 158 Pfam PF01899 Na+/H+ ion antiporter subunit 7 155 3.4E-39 T 13-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 VEA_001069 d7262b9cf22973bf78048b9a5bf7db1d 307 Gene3D G3DSA:3.40.50.1980 28 137 1.4E-28 T 13-10-2018 VEA_001069 d7262b9cf22973bf78048b9a5bf7db1d 307 Gene3D G3DSA:3.40.50.1980 139 306 9.5E-46 T 13-10-2018 VEA_001069 d7262b9cf22973bf78048b9a5bf7db1d 307 SUPERFAMILY SSF53807 31 291 1.53E-56 T 13-10-2018 VEA_001069 d7262b9cf22973bf78048b9a5bf7db1d 307 Pfam PF01497 Periplasmic binding protein 52 281 3.5E-28 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain VEA_000895 60e238cb24faf4039650cc7ac794b827 141 SUPERFAMILY SSF54593 9 134 5.5E-22 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEA_000895 60e238cb24faf4039650cc7ac794b827 141 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 134 2.5E-8 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VEA_000895 60e238cb24faf4039650cc7ac794b827 141 Gene3D G3DSA:3.10.180.10 11 140 2.9E-23 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEA_003549 f35850c928de9c176b010b144d37e156 194 SUPERFAMILY SSF52218 1 193 1.61E-50 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VEA_003549 f35850c928de9c176b010b144d37e156 194 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 194 31.74 T 13-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 VEA_003549 f35850c928de9c176b010b144d37e156 194 Pfam PF02525 Flavodoxin-like fold 3 191 8.1E-44 T 13-10-2018 IPR003680 Flavodoxin-like fold VEA_003549 f35850c928de9c176b010b144d37e156 194 Gene3D G3DSA:3.40.50.360 1 194 2.2E-55 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VEA_000706 a191f0938272866e6a6b078318cd4e8d 943 Gene3D G3DSA:3.30.2080.10 383 913 7.4E-199 T 13-10-2018 VEA_000706 a191f0938272866e6a6b078318cd4e8d 943 Gene3D G3DSA:1.20.1610.10 579 785 7.4E-199 T 13-10-2018 VEA_000706 a191f0938272866e6a6b078318cd4e8d 943 Gene3D G3DSA:1.20.1050.60 463 578 7.4E-199 T 13-10-2018 VEA_000706 a191f0938272866e6a6b078318cd4e8d 943 Gene3D G3DSA:2.70.98.10 87 462 7.4E-199 T 13-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 VEA_000706 a191f0938272866e6a6b078318cd4e8d 943 Pfam PF07971 Glycosyl hydrolase family 92 320 910 1.3E-123 T 13-10-2018 IPR012939 Glycosyl hydrolase family 92 VEA_000706 a191f0938272866e6a6b078318cd4e8d 943 SUPERFAMILY SSF48208 353 904 9.86E-8 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VEA_000706 a191f0938272866e6a6b078318cd4e8d 943 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 441 914 8.1E-98 T 13-10-2018 IPR005887 Alpha-1,2-mannosidase, putative VEA_001349 58d5da03e5b1d1ea478395e1c5a86461 153 Gene3D G3DSA:1.10.287.790 61 110 3.8E-30 T 13-10-2018 IPR027404 LuxT regulator, helix hairpin domain superfamily VEA_001349 58d5da03e5b1d1ea478395e1c5a86461 153 Gene3D G3DSA:1.10.10.60 2 60 8.1E-8 T 13-10-2018 VEA_001349 58d5da03e5b1d1ea478395e1c5a86461 153 Gene3D G3DSA:1.20.5.830 111 153 7.3E-28 T 13-10-2018 IPR027402 LuxT regulator, C-terminal domain superfamily VEA_001349 58d5da03e5b1d1ea478395e1c5a86461 153 SUPERFAMILY SSF46689 1 74 1.49E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_002494 74362006d634f0caa0163e7ec73949b2 156 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 18 149 3.7E-31 T 13-10-2018 VEA_002494 74362006d634f0caa0163e7ec73949b2 156 PIRSF PIRSF004923 1 156 1.2E-37 T 13-10-2018 IPR026268 Protein RseC VEA_002222 1286f50f8a7b1f56b95280a8a333c7e0 320 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 301 2.4E-129 T 13-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 VEA_002222 1286f50f8a7b1f56b95280a8a333c7e0 320 Gene3D G3DSA:3.40.50.450 4 287 1.7E-116 T 13-10-2018 VEA_002222 1286f50f8a7b1f56b95280a8a333c7e0 320 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 320 47.372 T 13-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 VEA_002222 1286f50f8a7b1f56b95280a8a333c7e0 320 Pfam PF00365 Phosphofructokinase 4 276 6.4E-109 T 13-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VEA_002222 1286f50f8a7b1f56b95280a8a333c7e0 320 SUPERFAMILY SSF53784 3 310 5.76E-112 T 13-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VEA_002222 1286f50f8a7b1f56b95280a8a333c7e0 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 9.4E-83 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VEA_002222 1286f50f8a7b1f56b95280a8a333c7e0 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 9.4E-83 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VEA_002222 1286f50f8a7b1f56b95280a8a333c7e0 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 9.4E-83 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VEA_002222 1286f50f8a7b1f56b95280a8a333c7e0 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 9.4E-83 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VEA_002222 1286f50f8a7b1f56b95280a8a333c7e0 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 9.4E-83 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VEA_002222 1286f50f8a7b1f56b95280a8a333c7e0 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 9.4E-83 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VEA_002222 1286f50f8a7b1f56b95280a8a333c7e0 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 9.4E-83 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VEA_002222 1286f50f8a7b1f56b95280a8a333c7e0 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 9.4E-83 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VEA_002222 1286f50f8a7b1f56b95280a8a333c7e0 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 9.4E-83 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VEA_002222 1286f50f8a7b1f56b95280a8a333c7e0 320 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 13-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VEA_002222 1286f50f8a7b1f56b95280a8a333c7e0 320 PIRSF PIRSF000532 1 320 1.3E-126 T 13-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 VEA_002222 1286f50f8a7b1f56b95280a8a333c7e0 320 Gene3D G3DSA:3.40.50.460 143 252 1.7E-116 T 13-10-2018 VEA_002003 fc8d05ad8946bf0bc01d2fbddc10dd12 145 Gene3D G3DSA:2.60.40.790 34 137 3.3E-23 T 13-10-2018 IPR008978 HSP20-like chaperone VEA_002003 fc8d05ad8946bf0bc01d2fbddc10dd12 145 Pfam PF00011 Hsp20/alpha crystallin family 43 136 3.4E-19 T 13-10-2018 IPR002068 Alpha crystallin/Hsp20 domain VEA_002003 fc8d05ad8946bf0bc01d2fbddc10dd12 145 SUPERFAMILY SSF49764 6 137 4.19E-23 T 13-10-2018 IPR008978 HSP20-like chaperone VEA_003853 d6e5377061b520ab08f52533d574465b 434 Pfam PF00294 pfkB family carbohydrate kinase 76 292 9.5E-12 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB VEA_003853 d6e5377061b520ab08f52533d574465b 434 SUPERFAMILY SSF53613 31 417 4.84E-45 T 13-10-2018 IPR029056 Ribokinase-like VEA_001235 2a9d725c53d02e682a301d3a014a629b 332 SUPERFAMILY SSF56112 38 330 8.64E-23 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily VEA_001235 2a9d725c53d02e682a301d3a014a629b 332 Pfam PF02958 Ecdysteroid kinase 76 153 2.9E-5 T 13-10-2018 IPR004119 Protein of unknown function DUF227 VEA_001235 2a9d725c53d02e682a301d3a014a629b 332 Pfam PF02958 Ecdysteroid kinase 177 274 4.7E-9 T 13-10-2018 IPR004119 Protein of unknown function DUF227 VEA_001235 2a9d725c53d02e682a301d3a014a629b 332 Gene3D G3DSA:3.90.1200.10 128 305 1.5E-6 T 13-10-2018 VEA_001235 2a9d725c53d02e682a301d3a014a629b 332 SMART SM00587 119 276 0.0012 T 13-10-2018 IPR015897 CHK kinase-like VEA_003813 b064082a8fcf47bfac3e8909a035b512 77 Pfam PF06667 Phage shock protein B 3 74 6.2E-32 T 13-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 VEA_003813 b064082a8fcf47bfac3e8909a035b512 77 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 75 7.9E-36 T 13-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 VEA_003851 a540818e7612f35b84987de7899539f7 533 Pfam PF03553 Na+/H+ antiporter family 165 497 9.9E-108 T 13-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VEA_000684 0210ad72456fef27da30b8cde674e705 171 SUPERFAMILY SSF53146 1 117 6.93E-22 T 13-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily VEA_000684 0210ad72456fef27da30b8cde674e705 171 Gene3D G3DSA:3.30.420.130 3 103 7.9E-15 T 13-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily VEA_000684 0210ad72456fef27da30b8cde674e705 171 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 8 98 4.4E-16 T 13-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis VEA_000275 80ecfee3b00c047748ab8dce74e20055 454 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 37 445 1.5E-27 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VEA_000275 80ecfee3b00c047748ab8dce74e20055 454 SUPERFAMILY SSF56219 32 450 4.14E-14 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VEA_000275 80ecfee3b00c047748ab8dce74e20055 454 Gene3D G3DSA:3.60.10.10 241 454 1.2E-5 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VEA_002689 d47973982d68d80f5a653c759e5c6cef 106 Pfam PF11012 Protein of unknown function (DUF2850) 20 97 8.0E-31 T 13-10-2018 IPR021271 Protein of unknown function DUF2850 VEA_003290 a036822732b9af1656f75e6d05374047 634 Pfam PF13245 AAA domain 23 220 2.4E-19 T 13-10-2018 VEA_003290 a036822732b9af1656f75e6d05374047 634 SUPERFAMILY SSF52540 16 612 3.22E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003290 a036822732b9af1656f75e6d05374047 634 Gene3D G3DSA:3.40.50.300 510 622 2.3E-8 T 13-10-2018 VEA_002665 08f1ac7303fc1267eaf216e34f224397 356 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 163 172 - T 13-10-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 VEA_002665 08f1ac7303fc1267eaf216e34f224397 356 SUPERFAMILY SSF51445 7 313 7.88E-52 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VEA_002665 08f1ac7303fc1267eaf216e34f224397 356 Gene3D G3DSA:3.20.20.80 20 313 4.1E-32 T 13-10-2018 VEA_002665 08f1ac7303fc1267eaf216e34f224397 356 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 40 292 2.5E-11 T 13-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 VEA_001314 50845d3b6871ad11baa0e160cec8300f 199 Pfam PF16925 Bacterial transcriptional repressor C-terminal 83 186 1.4E-7 T 13-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VEA_001314 50845d3b6871ad11baa0e160cec8300f 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 2.1E-12 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEA_001314 50845d3b6871ad11baa0e160cec8300f 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 3.8E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEA_001314 50845d3b6871ad11baa0e160cec8300f 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 3.8E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEA_001314 50845d3b6871ad11baa0e160cec8300f 199 SUPERFAMILY SSF46689 2 73 1.64E-16 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_001314 50845d3b6871ad11baa0e160cec8300f 199 Gene3D G3DSA:1.10.357.10 1 194 4.4E-59 T 13-10-2018 VEA_001314 50845d3b6871ad11baa0e160cec8300f 199 SUPERFAMILY SSF48498 81 193 1.68E-20 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VEA_004471 0386312eb6d1e19da0459c84bbdd3d25 231 Pfam PF01048 Phosphorylase superfamily 2 227 1.2E-48 T 13-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VEA_004471 0386312eb6d1e19da0459c84bbdd3d25 231 SUPERFAMILY SSF53167 1 229 3.93E-74 T 13-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 VEA_004471 0386312eb6d1e19da0459c84bbdd3d25 231 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 228 1.0E-101 T 13-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VEA_004471 0386312eb6d1e19da0459c84bbdd3d25 231 Gene3D G3DSA:3.40.50.1580 1 231 6.4E-72 T 13-10-2018 VEA_004471 0386312eb6d1e19da0459c84bbdd3d25 231 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 230 47.955 T 13-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VEA_001702 75bff307f44653c9504397b38d7f9199 164 Pfam PF11736 Protein of unknown function (DUF3299) 30 159 7.7E-44 T 13-10-2018 IPR021727 Protein of unknown function DUF3299 VEA_001702 75bff307f44653c9504397b38d7f9199 164 Gene3D G3DSA:2.40.50.870 23 164 4.0E-46 T 13-10-2018 VEA_003107 eb9a45db6611d589ca3fa5959676d4b8 93 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 74 5.1E-9 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VEA_003107 eb9a45db6611d589ca3fa5959676d4b8 93 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 35 43 - T 13-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VEA_003107 eb9a45db6611d589ca3fa5959676d4b8 93 Gene3D G3DSA:3.10.20.30 1 90 8.7E-17 T 13-10-2018 IPR012675 Beta-grasp domain superfamily VEA_003107 eb9a45db6611d589ca3fa5959676d4b8 93 SUPERFAMILY SSF54292 3 81 1.57E-18 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VEA_000307 7887829eaea7a2729a17813921e1b2b1 192 Pfam PF14316 Domain of unknown function (DUF4381) 15 164 2.0E-24 T 13-10-2018 IPR025489 Protein of unknown function (DUF4381 VEA_000992 cc363eb78521469fe4195e4c40bd77d6 656 Pfam PF11826 Protein of unknown function (DUF3346) 290 514 1.7E-141 T 13-10-2018 IPR021781 Protein of unknown function DUF3346 VEA_002198 7e24ee9db87cbb9e22d16413ca77dda0 149 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 6.0E-64 T 13-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VEA_002198 7e24ee9db87cbb9e22d16413ca77dda0 149 Pfam PF01220 Dehydroquinase class II 6 142 5.9E-62 T 13-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VEA_002198 7e24ee9db87cbb9e22d16413ca77dda0 149 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 21 149 7.0E-69 T 13-10-2018 VEA_002198 7e24ee9db87cbb9e22d16413ca77dda0 149 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 13-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VEA_002198 7e24ee9db87cbb9e22d16413ca77dda0 149 SUPERFAMILY SSF52304 4 146 4.19E-62 T 13-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VEA_002198 7e24ee9db87cbb9e22d16413ca77dda0 149 PIRSF PIRSF001399 3 149 1.5E-59 T 13-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VEA_002198 7e24ee9db87cbb9e22d16413ca77dda0 149 Gene3D G3DSA:3.40.50.9100 1 149 5.8E-67 T 13-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VEA_002198 7e24ee9db87cbb9e22d16413ca77dda0 149 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 149 75.015 T 13-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VEA_004176 430644ec607432da0b4438470870dfa5 248 Pfam PF13144 Chaperone for flagella basal body P-ring formation 49 246 1.2E-53 T 13-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal VEA_004176 430644ec607432da0b4438470870dfa5 248 SMART SM00858 126 188 1.1E-10 T 13-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 VEA_004176 430644ec607432da0b4438470870dfa5 248 Gene3D G3DSA:2.30.30.760 188 248 8.0E-13 T 13-10-2018 VEA_004176 430644ec607432da0b4438470870dfa5 248 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 114 246 1.2E-41 T 13-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal VEA_000433 13e3b2f1a99e971f19e4876f5cf2217a 199 SUPERFAMILY SSF56925 63 163 3.4E-5 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VEA_000981 3bcf781fae03edd8078b17c5811364b9 360 Pfam PF01098 Cell cycle protein 14 355 1.5E-98 T 13-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEA_000981 3bcf781fae03edd8078b17c5811364b9 360 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 4 359 25.931 T 13-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEA_000981 3bcf781fae03edd8078b17c5811364b9 360 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 10 354 2.4E-116 T 13-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEA_000840 22f3c9a664ee1b48147dba51c563b7a9 179 PIRSF PIRSF014995 8 179 7.6E-67 T 13-10-2018 IPR014469 Protein of unknown function DUF2271 VEA_000840 22f3c9a664ee1b48147dba51c563b7a9 179 Pfam PF10029 Predicted periplasmic protein (DUF2271) 39 169 4.4E-46 T 13-10-2018 IPR014469 Protein of unknown function DUF2271 VEA_000840 22f3c9a664ee1b48147dba51c563b7a9 179 Gene3D G3DSA:2.60.40.4070 95 149 2.6E-9 T 13-10-2018 VEA_002180 9f2be4326b3a602ba3dba6a31e8220d5 195 Pfam PF04222 Protein of unknown function (DUF416) 6 193 1.5E-78 T 13-10-2018 IPR007338 Protein of unknown function DUF416 VEA_002180 9f2be4326b3a602ba3dba6a31e8220d5 195 Gene3D G3DSA:1.20.1590.10 2 195 5.7E-68 T 13-10-2018 IPR023381 YP001051499.1-like domain superfamily VEA_004063 4e4a8032ae514fc31860c48886d2264d 255 SMART SM00563 86 196 1.9E-12 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VEA_004063 4e4a8032ae514fc31860c48886d2264d 255 Pfam PF01553 Acyltransferase 75 189 3.2E-14 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VEA_004063 4e4a8032ae514fc31860c48886d2264d 255 SUPERFAMILY SSF69593 70 249 1.57E-23 T 13-10-2018 VEA_001483 c0bb869b37342edf5b4692f0e6b0e6ef 114 Gene3D G3DSA:3.20.160.10 1 114 1.2E-51 T 13-10-2018 IPR038604 Type III effector HopJ superfamily VEA_001483 c0bb869b37342edf5b4692f0e6b0e6ef 114 Pfam PF08888 HopJ type III effector protein 4 111 1.0E-48 T 13-10-2018 IPR014984 HopJ type III effector protein VEA_002091 018eb2e96a46c80cfe4c753a467affd2 305 SUPERFAMILY SSF103481 51 147 1.07E-13 T 13-10-2018 VEA_002091 018eb2e96a46c80cfe4c753a467affd2 305 Pfam PF00892 EamA-like transporter family 13 146 3.8E-15 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEA_002091 018eb2e96a46c80cfe4c753a467affd2 305 SUPERFAMILY SSF103481 207 292 2.22E-8 T 13-10-2018 VEA_002091 018eb2e96a46c80cfe4c753a467affd2 305 TIGRFAM TIGR00688 rarD: protein RarD 12 265 9.2E-87 T 13-10-2018 IPR004626 RarD protein GO:0005887 VEA_000418 d896a94b789c2ba1f20efd0b8d99718a 889 Pfam PF13244 Domain of unknown function (DUF4040) 592 657 2.3E-14 T 13-10-2018 IPR025383 Domain of unknown function DUF4040 VEA_000418 d896a94b789c2ba1f20efd0b8d99718a 889 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 49 101 1.9E-10 T 13-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEA_000418 d896a94b789c2ba1f20efd0b8d99718a 889 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 204 225 5.2E-33 T 13-10-2018 VEA_000418 d896a94b789c2ba1f20efd0b8d99718a 889 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 91 111 5.2E-33 T 13-10-2018 VEA_000418 d896a94b789c2ba1f20efd0b8d99718a 889 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 226 252 5.2E-33 T 13-10-2018 VEA_000418 d896a94b789c2ba1f20efd0b8d99718a 889 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 294 306 5.2E-33 T 13-10-2018 VEA_000418 d896a94b789c2ba1f20efd0b8d99718a 889 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 63 88 5.2E-33 T 13-10-2018 VEA_000418 d896a94b789c2ba1f20efd0b8d99718a 889 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 761 878 4.1E-25 T 13-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein VEA_000418 d896a94b789c2ba1f20efd0b8d99718a 889 Pfam PF00361 Proton-conducting membrane transporter 114 402 5.8E-61 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEA_004297 f3841be7d3e9d08d6b8726e5952dc1cf 119 Pfam PF04355 SmpA / OmlA family 35 103 1.7E-25 T 13-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 VEA_004297 f3841be7d3e9d08d6b8726e5952dc1cf 119 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 7 112 32.226 T 13-10-2018 IPR026592 Outer membrane protein assembly factor BamE VEA_004297 f3841be7d3e9d08d6b8726e5952dc1cf 119 Gene3D G3DSA:3.30.1450.10 34 117 4.6E-25 T 13-10-2018 IPR037873 BamE-like VEA_003807 9b423ab5dd36ce52e5985f6fba13aa1c 286 SUPERFAMILY SSF158855 34 283 1.01E-58 T 13-10-2018 VEA_003807 9b423ab5dd36ce52e5985f6fba13aa1c 286 Pfam PF03280 Proteobacterial lipase chaperone protein 88 272 1.3E-39 T 13-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 VEA_002242 a48d87b912204619ea70ea543a1c0ca6 375 Gene3D G3DSA:2.70.70.10 236 375 1.7E-34 T 13-10-2018 IPR011055 Duplicated hybrid motif VEA_002242 a48d87b912204619ea70ea543a1c0ca6 375 SUPERFAMILY SSF51261 143 373 4.97E-49 T 13-10-2018 IPR011055 Duplicated hybrid motif VEA_002242 a48d87b912204619ea70ea543a1c0ca6 375 Pfam PF01551 Peptidase family M23 276 369 3.6E-24 T 13-10-2018 IPR016047 Peptidase M23 VEA_000120 fd59b4502a5b84b943f9d74f5fd7734f 145 SUPERFAMILY SSF158675 1 145 1.03E-52 T 13-10-2018 IPR023132 Sama2622-like superfamily VEA_000120 fd59b4502a5b84b943f9d74f5fd7734f 145 Gene3D G3DSA:1.10.3440.10 3 144 4.6E-5 T 13-10-2018 IPR023132 Sama2622-like superfamily VEA_000120 fd59b4502a5b84b943f9d74f5fd7734f 145 Pfam PF11269 Protein of unknown function (DUF3069) 24 143 5.2E-53 T 13-10-2018 IPR021422 Protein of unknown function DUF3069 VEA_004144 ebbb56643b7021d2f3984f14805f9dda 116 SUPERFAMILY SSF54913 1 102 7.23E-22 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta VEA_004144 ebbb56643b7021d2f3984f14805f9dda 116 SMART SM00938 6 104 6.4E-6 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VEA_004144 ebbb56643b7021d2f3984f14805f9dda 116 Gene3D G3DSA:3.30.70.120 1 104 6.1E-15 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VEA_000556 d864c1b52b3238d4213daeb47c7e6332 440 SMART SM00387 330 440 9.0E-24 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_000556 d864c1b52b3238d4213daeb47c7e6332 440 SMART SM00304 168 221 0.008 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_000556 d864c1b52b3238d4213daeb47c7e6332 440 Gene3D G3DSA:3.30.565.10 311 439 3.9E-25 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_000556 d864c1b52b3238d4213daeb47c7e6332 440 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 338 438 1.6E-15 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VEA_000556 d864c1b52b3238d4213daeb47c7e6332 440 Gene3D G3DSA:1.10.287.130 172 287 4.0E-19 T 13-10-2018 VEA_000556 d864c1b52b3238d4213daeb47c7e6332 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 393 1.9E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_000556 d864c1b52b3238d4213daeb47c7e6332 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 365 379 1.9E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_000556 d864c1b52b3238d4213daeb47c7e6332 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 437 1.9E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_000556 d864c1b52b3238d4213daeb47c7e6332 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 1.9E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VEA_000556 d864c1b52b3238d4213daeb47c7e6332 440 SUPERFAMILY SSF47384 205 284 6.08E-11 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VEA_000556 d864c1b52b3238d4213daeb47c7e6332 440 SMART SM00388 222 286 1.7E-4 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_000556 d864c1b52b3238d4213daeb47c7e6332 440 SUPERFAMILY SSF55874 322 437 3.93E-26 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VEA_000556 d864c1b52b3238d4213daeb47c7e6332 440 Pfam PF00512 His Kinase A (phospho-acceptor) domain 226 283 3.6E-8 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VEA_002109 680e906e13a27a8de2a1f95fa260cb4c 38 Pfam PF13627 Prokaryotic lipoprotein-attachment site 6 28 8.1E-9 T 13-10-2018 IPR032831 Prokaryotic lipoprotein-attachment site VEA_002154 35fe7c626b5988d86c048765590e0556 121 Pfam PF07226 Protein of unknown function (DUF1422) 5 114 2.2E-50 T 13-10-2018 IPR009867 Protein of unknown function DUF1422 VEA_002154 35fe7c626b5988d86c048765590e0556 121 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 1 111 6.0E-59 T 13-10-2018 IPR009867 Protein of unknown function DUF1422 VEA_003373 bebc0386c13ed3783b8fcb51bca08f43 132 Pfam PF09621 Type III secretion system regulator (LcrR) 3 131 4.3E-55 T 13-10-2018 IPR022797 Type III secretion system regulator LcrR/Chaperone CesD2 VEA_003373 bebc0386c13ed3783b8fcb51bca08f43 132 TIGRFAM TIGR02572 LcrR: type III secretion system regulator LcrR 3 132 2.4E-57 T 13-10-2018 IPR013405 Type III secretion system regulator, LcrR VEA_003899 fd70f465f0fae33bec5aeafa11024454 38 Pfam PF00075 RNase H 2 34 4.6E-6 T 13-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 VEA_003899 fd70f465f0fae33bec5aeafa11024454 38 Gene3D G3DSA:3.30.420.10 1 38 9.4E-8 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VEA_003899 fd70f465f0fae33bec5aeafa11024454 38 SUPERFAMILY SSF53098 2 36 7.84E-8 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VEA_002142 36015f05572eb46012147707587bda75 106 Pfam PF00581 Rhodanese-like domain 13 98 1.8E-11 T 13-10-2018 IPR001763 Rhodanese-like domain VEA_002142 36015f05572eb46012147707587bda75 106 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 105 31.882 T 13-10-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927 VEA_002142 36015f05572eb46012147707587bda75 106 Gene3D G3DSA:3.40.250.10 1 101 5.2E-26 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily VEA_002142 36015f05572eb46012147707587bda75 106 SUPERFAMILY SSF52821 1 105 1.57E-29 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily VEA_002142 36015f05572eb46012147707587bda75 106 SMART SM00450 7 102 1.8E-18 T 13-10-2018 IPR001763 Rhodanese-like domain VEA_002427 7409161b40dd95a720f391084f6dbe2d 150 Gene3D G3DSA:3.40.50.10110 1 147 1.1E-42 T 13-10-2018 IPR036768 DNA polymerase III subunit chi superfamily VEA_002427 7409161b40dd95a720f391084f6dbe2d 150 SUPERFAMILY SSF102400 2 146 3.53E-41 T 13-10-2018 IPR036768 DNA polymerase III subunit chi superfamily VEA_002427 7409161b40dd95a720f391084f6dbe2d 150 Pfam PF04364 DNA polymerase III chi subunit, HolC 2 143 1.5E-32 T 13-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 VEA_001531 dec3c32d6174d39126c0f167a9ae3fde 244 Gene3D G3DSA:1.10.3720.10 40 229 4.7E-27 T 13-10-2018 IPR035906 MetI-like superfamily VEA_001531 dec3c32d6174d39126c0f167a9ae3fde 244 SUPERFAMILY SSF161098 39 222 2.75E-32 T 13-10-2018 IPR035906 MetI-like superfamily VEA_001531 dec3c32d6174d39126c0f167a9ae3fde 244 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 62 222 1.2E-16 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_004319 8eca4d40a99e287ea2adad6a3b5e074b 195 Pfam PF09335 SNARE associated Golgi protein 29 149 6.2E-21 T 13-10-2018 IPR032816 SNARE associated Golgi protein VEA_003170 81f4aad10b2a3861f2118469273c36e8 263 SUPERFAMILY SSF52200 2 103 9.94E-10 T 13-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily VEA_003170 81f4aad10b2a3861f2118469273c36e8 263 Gene3D G3DSA:3.40.50.10140 1 131 9.5E-14 T 13-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily VEA_003170 81f4aad10b2a3861f2118469273c36e8 263 Pfam PF13676 TIR domain 3 110 7.2E-13 T 13-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 VEA_001199 dd447007e68178d49e2cf388b825e57a 309 Gene3D G3DSA:3.40.190.10 98 298 4.0E-59 T 13-10-2018 VEA_001199 dd447007e68178d49e2cf388b825e57a 309 Pfam PF03466 LysR substrate binding domain 94 301 2.6E-38 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_001199 dd447007e68178d49e2cf388b825e57a 309 SUPERFAMILY SSF53850 95 301 3.88E-39 T 13-10-2018 VEA_001199 dd447007e68178d49e2cf388b825e57a 309 Gene3D G3DSA:3.40.190.10 169 270 4.0E-59 T 13-10-2018 VEA_001199 dd447007e68178d49e2cf388b825e57a 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 3.7E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_001199 dd447007e68178d49e2cf388b825e57a 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 3.7E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_001199 dd447007e68178d49e2cf388b825e57a 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 3.7E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_001199 dd447007e68178d49e2cf388b825e57a 309 SUPERFAMILY SSF46785 10 116 2.8E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_001199 dd447007e68178d49e2cf388b825e57a 309 Gene3D G3DSA:1.10.10.10 9 95 4.6E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_001199 dd447007e68178d49e2cf388b825e57a 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 1.1E-19 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_001342 f0e10113181121fad83c720252c08767 177 SUPERFAMILY SSF52374 1 171 2.53E-26 T 13-10-2018 VEA_001342 f0e10113181121fad83c720252c08767 177 Pfam PF01467 Cytidylyltransferase-like 6 143 4.7E-7 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VEA_001342 f0e10113181121fad83c720252c08767 177 Gene3D G3DSA:3.40.50.620 1 177 7.4E-46 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_000753 631fa3610219165e2793439469a2da76 257 Gene3D G3DSA:3.90.1200.10 80 254 1.3E-11 T 13-10-2018 VEA_000753 631fa3610219165e2793439469a2da76 257 Pfam PF01636 Phosphotransferase enzyme family 110 162 3.0E-11 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase VEA_000753 631fa3610219165e2793439469a2da76 257 SUPERFAMILY SSF56112 4 209 4.03E-27 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily VEA_003859 aeaf3f47d9990aa3fbdc4743cf1647c8 176 Pfam PF16036 Chalcone isomerase-like 50 173 1.7E-6 T 13-10-2018 IPR016087 Chalcone isomerase GO:0016872 VEA_004138 634ef195387216dba2e194a7a2508a4b 292 SUPERFAMILY SSF46894 10 107 3.68E-18 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEA_004138 634ef195387216dba2e194a7a2508a4b 292 Gene3D G3DSA:1.10.10.10 5 107 9.4E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_004138 634ef195387216dba2e194a7a2508a4b 292 Pfam PF00486 Transcriptional regulatory protein, C terminal 32 107 1.4E-19 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEA_004138 634ef195387216dba2e194a7a2508a4b 292 SMART SM00862 30 107 1.8E-17 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEA_001283 1edd60ddf30ba765e2d07f0e1e86efaa 261 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_001283 1edd60ddf30ba765e2d07f0e1e86efaa 261 Gene3D G3DSA:3.40.50.300 1 255 1.7E-60 T 13-10-2018 VEA_001283 1edd60ddf30ba765e2d07f0e1e86efaa 261 SUPERFAMILY SSF52540 4 222 3.17E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001283 1edd60ddf30ba765e2d07f0e1e86efaa 261 SMART SM00382 26 214 1.2E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_001283 1edd60ddf30ba765e2d07f0e1e86efaa 261 Pfam PF00005 ABC transporter 22 166 3.6E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_003486 279ce6638cc66bb876ea3c720961f0a9 243 Gene3D G3DSA:3.40.50.1220 8 227 9.2E-82 T 13-10-2018 VEA_003486 279ce6638cc66bb876ea3c720961f0a9 243 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 6 236 56.584 T 13-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 VEA_003486 279ce6638cc66bb876ea3c720961f0a9 243 SUPERFAMILY SSF52467 6 234 1.76E-72 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VEA_003486 279ce6638cc66bb876ea3c720961f0a9 243 Pfam PF02146 Sir2 family 13 186 3.3E-51 T 13-10-2018 IPR003000 Sirtuin family GO:0070403 VEA_003486 279ce6638cc66bb876ea3c720961f0a9 243 Gene3D G3DSA:3.30.1600.10 22 158 9.2E-82 T 13-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily VEA_001909 04ae48fa6f1ffdaac0f5694f43bf745b 848 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 425 574 1.9E-26 T 13-10-2018 IPR000160 GGDEF domain VEA_001909 04ae48fa6f1ffdaac0f5694f43bf745b 848 Gene3D G3DSA:3.30.450.20 126 219 2.6E-13 T 13-10-2018 VEA_001909 04ae48fa6f1ffdaac0f5694f43bf745b 848 Gene3D G3DSA:3.20.20.450 595 847 7.4E-89 T 13-10-2018 IPR035919 EAL domain superfamily VEA_001909 04ae48fa6f1ffdaac0f5694f43bf745b 848 Gene3D G3DSA:1.20.1480.50 329 427 9.8E-9 T 13-10-2018 VEA_001909 04ae48fa6f1ffdaac0f5694f43bf745b 848 Pfam PF00563 EAL domain 599 834 6.0E-69 T 13-10-2018 IPR001633 EAL domain VEA_001909 04ae48fa6f1ffdaac0f5694f43bf745b 848 SUPERFAMILY SSF141868 599 846 3.92E-83 T 13-10-2018 IPR035919 EAL domain superfamily VEA_001909 04ae48fa6f1ffdaac0f5694f43bf745b 848 Pfam PF02743 Cache domain 47 297 1.1E-23 T 13-10-2018 IPR033479 Double Cache domain 1 VEA_001909 04ae48fa6f1ffdaac0f5694f43bf745b 848 SMART SM00304 368 421 7.4E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VEA_001909 04ae48fa6f1ffdaac0f5694f43bf745b 848 SMART SM00052 592 839 1.3E-102 T 13-10-2018 IPR001633 EAL domain VEA_001909 04ae48fa6f1ffdaac0f5694f43bf745b 848 Gene3D G3DSA:3.30.70.270 428 594 4.3E-35 T 13-10-2018 VEA_001909 04ae48fa6f1ffdaac0f5694f43bf745b 848 SUPERFAMILY SSF55073 432 584 1.57E-31 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_001909 04ae48fa6f1ffdaac0f5694f43bf745b 848 SUPERFAMILY SSF158472 369 418 3.4E-7 T 13-10-2018 VEA_001909 04ae48fa6f1ffdaac0f5694f43bf745b 848 Pfam PF00990 Diguanylate cyclase, GGDEF domain 428 574 1.5E-30 T 13-10-2018 IPR000160 GGDEF domain VEA_001909 04ae48fa6f1ffdaac0f5694f43bf745b 848 SMART SM00267 416 582 8.7E-32 T 13-10-2018 IPR000160 GGDEF domain VEA_002946 8be2f3e4134a5d834a036514d936ce56 348 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 3 348 27.288 T 13-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 VEA_002946 8be2f3e4134a5d834a036514d936ce56 348 Pfam PF03116 NQR2, RnfD, RnfE family 6 347 3.1E-106 T 13-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 VEA_002946 8be2f3e4134a5d834a036514d936ce56 348 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 348 3.2E-140 T 13-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 VEA_003047 fe94c1995f86a2fa1641f0da163e977b 423 Gene3D G3DSA:1.20.1600.10 26 423 6.2E-79 T 13-10-2018 VEA_003047 fe94c1995f86a2fa1641f0da163e977b 423 Pfam PF02321 Outer membrane efflux protein 229 407 1.2E-26 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VEA_003047 fe94c1995f86a2fa1641f0da163e977b 423 Pfam PF02321 Outer membrane efflux protein 28 204 5.3E-27 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VEA_003047 fe94c1995f86a2fa1641f0da163e977b 423 SUPERFAMILY SSF56954 6 412 7.98E-78 T 13-10-2018 VEA_000207 779e3a1c696264770f4580923f143f56 434 Pfam PF00294 pfkB family carbohydrate kinase 138 300 3.4E-12 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB VEA_000207 779e3a1c696264770f4580923f143f56 434 SUPERFAMILY SSF53613 34 417 3.8E-45 T 13-10-2018 IPR029056 Ribokinase-like VEA_000207 779e3a1c696264770f4580923f143f56 434 Gene3D G3DSA:3.40.1190.20 33 418 1.1E-45 T 13-10-2018 IPR029056 Ribokinase-like VEA_004277 7f0f5758e452e532ef188c23580135d8 730 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 142 1.3E-12 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain VEA_004277 7f0f5758e452e532ef188c23580135d8 730 SUPERFAMILY SSF56935 32 730 1.1E-81 T 13-10-2018 VEA_004277 7f0f5758e452e532ef188c23580135d8 730 Gene3D G3DSA:2.40.170.20 161 729 2.9E-80 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VEA_004277 7f0f5758e452e532ef188c23580135d8 730 Gene3D G3DSA:2.170.130.10 45 160 5.8E-21 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VEA_004277 7f0f5758e452e532ef188c23580135d8 730 Pfam PF00593 TonB dependent receptor 247 729 2.3E-29 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VEA_001546 568fe47928a849a400882667c9db72d2 497 Pfam PF00171 Aldehyde dehydrogenase family 14 477 6.1E-137 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VEA_001546 568fe47928a849a400882667c9db72d2 497 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 6 481 5.5E-241 T 13-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 VEA_001546 568fe47928a849a400882667c9db72d2 497 Gene3D G3DSA:3.40.605.10 24 458 8.2E-143 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VEA_001546 568fe47928a849a400882667c9db72d2 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VEA_001546 568fe47928a849a400882667c9db72d2 497 SUPERFAMILY SSF53720 2 484 4.19E-144 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VEA_001546 568fe47928a849a400882667c9db72d2 497 Gene3D G3DSA:3.40.309.10 250 450 8.2E-143 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VEA_002084 dbdd131a36e9587b16a4bddbb97b8872 289 Hamap MF_00697 UPF0276 protein . 10 282 44.031 T 13-10-2018 IPR007801 Uncharacterised protein family UPF0276 VEA_002084 dbdd131a36e9587b16a4bddbb97b8872 289 Pfam PF05114 Protein of unknown function (DUF692) 10 274 1.4E-104 T 13-10-2018 IPR007801 Uncharacterised protein family UPF0276 VEA_002084 dbdd131a36e9587b16a4bddbb97b8872 289 SUPERFAMILY SSF51658 30 255 1.74E-10 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily VEA_002084 dbdd131a36e9587b16a4bddbb97b8872 289 Gene3D G3DSA:3.20.20.150 8 286 1.6E-85 T 13-10-2018 VEA_000952 209a5258271c4e8cb0993dce8cba478e 202 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 11 188 4.0E-32 T 13-10-2018 IPR003740 Uncharacterised membrane protein YitT VEA_003834 dd6990653b9876430a81b6d9f3ba55ba 275 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 190 5.5E-15 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VEA_003834 dd6990653b9876430a81b6d9f3ba55ba 275 SUPERFAMILY SSF51735 8 268 2.68E-29 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_003834 dd6990653b9876430a81b6d9f3ba55ba 275 Gene3D G3DSA:3.40.50.720 1 275 3.9E-46 T 13-10-2018 VEA_000767 a127b7104901b8dd259be68d55928dff 367 SUPERFAMILY SSF53383 3 362 5.75E-89 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_000767 a127b7104901b8dd259be68d55928dff 367 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 1 367 214.369 T 13-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 VEA_000767 a127b7104901b8dd259be68d55928dff 367 Pfam PF00266 Aminotransferase class-V 36 313 1.3E-30 T 13-10-2018 IPR000192 Aminotransferase class V domain VEA_000767 a127b7104901b8dd259be68d55928dff 367 Gene3D G3DSA:3.90.1150.10 8 353 6.9E-123 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEA_000767 a127b7104901b8dd259be68d55928dff 367 PIRSF PIRSF000524 1 365 9.3E-59 T 13-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 VEA_000767 a127b7104901b8dd259be68d55928dff 367 Gene3D G3DSA:3.40.640.10 16 262 6.9E-123 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_000767 a127b7104901b8dd259be68d55928dff 367 TIGRFAM TIGR03301 PhnW-AepZ: 2-aminoethylphosphonate aminotransferase 6 362 1.3E-170 T 13-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 VEA_000767 a127b7104901b8dd259be68d55928dff 367 TIGRFAM TIGR02326 transamin_PhnW: 2-aminoethylphosphonate--pyruvate transaminase 2 365 7.0E-202 T 13-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 VEA_002292 464552292d9db5f9e7b0f11e5149f8a0 260 Gene3D G3DSA:3.10.50.40 149 260 3.6E-43 T 13-10-2018 VEA_002292 464552292d9db5f9e7b0f11e5149f8a0 260 Gene3D G3DSA:1.10.287.460 31 148 1.1E-32 T 13-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 VEA_002292 464552292d9db5f9e7b0f11e5149f8a0 260 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 164 251 1.4E-29 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VEA_002292 464552292d9db5f9e7b0f11e5149f8a0 260 SUPERFAMILY SSF54534 46 253 6.87E-65 T 13-10-2018 VEA_002292 464552292d9db5f9e7b0f11e5149f8a0 260 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 37 157 1.5E-32 T 13-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 VEA_001447 5047238e00c4498158cbde39c5bcd7d6 179 PIRSF PIRSF005413 1 178 6.2E-67 T 13-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001447 5047238e00c4498158cbde39c5bcd7d6 179 Gene3D G3DSA:2.60.370.10 54 177 1.7E-43 T 13-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001447 5047238e00c4498158cbde39c5bcd7d6 179 SUPERFAMILY SSF110111 55 174 5.62E-47 T 13-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_001447 5047238e00c4498158cbde39c5bcd7d6 179 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 28 172 9.3E-50 T 13-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_003681 b438b15327adf6f7839a84fd793f27e8 76 Pfam PF00462 Glutaredoxin 4 60 6.3E-12 T 13-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VEA_003681 b438b15327adf6f7839a84fd793f27e8 76 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 13-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 VEA_003681 b438b15327adf6f7839a84fd793f27e8 76 SUPERFAMILY SSF52833 3 68 6.13E-14 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VEA_003681 b438b15327adf6f7839a84fd793f27e8 76 Gene3D G3DSA:3.40.30.10 2 75 3.4E-16 T 13-10-2018 VEA_003192 b376236ab5735c8f5d285a1b8d77a946 124 Pfam PF14534 Domain of unknown function (DUF4440) 9 115 4.4E-16 T 13-10-2018 IPR027843 Domain of unknown function DUF4440 VEA_003192 b376236ab5735c8f5d285a1b8d77a946 124 Gene3D G3DSA:3.10.450.50 4 124 4.9E-32 T 13-10-2018 VEA_003192 b376236ab5735c8f5d285a1b8d77a946 124 SUPERFAMILY SSF54427 4 122 2.1E-28 T 13-10-2018 IPR032710 NTF2-like domain superfamily VEA_001373 73dbc7d66ec968925e03533896fda5e4 76 Pfam PF09016 Pas factor saposin fold 1 76 1.4E-45 T 13-10-2018 IPR015106 Pas factor saposin domain VEA_001373 73dbc7d66ec968925e03533896fda5e4 76 Gene3D G3DSA:1.20.1280.100 1 73 4.9E-40 T 13-10-2018 VEA_001540 637cc8ecf0274d44e7cf481f062c9eb7 302 ProSitePatterns PS01062 Hydroxymethylglutaryl-coenzyme A lyase active site. 231 240 - T 13-10-2018 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site GO:0004419 KEGG: 00072+4.1.3.4|KEGG: 00280+4.1.3.4|KEGG: 00281+4.1.3.4|KEGG: 00650+4.1.3.4|MetaCyc: PWY-5074|Reactome: R-HSA-77111|Reactome: R-HSA-9033241 VEA_001540 637cc8ecf0274d44e7cf481f062c9eb7 302 Pfam PF00682 HMGL-like 5 275 2.6E-50 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 VEA_001540 637cc8ecf0274d44e7cf481f062c9eb7 302 SUPERFAMILY SSF51569 2 296 4.21E-71 T 13-10-2018 VEA_001540 637cc8ecf0274d44e7cf481f062c9eb7 302 Gene3D G3DSA:3.20.20.70 1 298 1.6E-128 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_003892 578f9c77200580edcf59129639b876d2 318 Pfam PF03547 Membrane transport protein 164 307 2.4E-14 T 13-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 VEA_002390 6812bb25fa109a5502baca565ec6a46d 481 SUPERFAMILY SSF111283 18 480 4.32E-129 T 13-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 VEA_002390 6812bb25fa109a5502baca565ec6a46d 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 4.0E-65 T 13-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 VEA_002390 6812bb25fa109a5502baca565ec6a46d 481 Gene3D G3DSA:3.30.2290.10 7 239 7.9E-16 T 13-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal VEA_002390 6812bb25fa109a5502baca565ec6a46d 481 PIRSF PIRSF004919 14 481 7.4E-143 T 13-10-2018 IPR025502 TldD VEA_000292 b8271b2d19b636bbea5ee13df4858556 329 PRINTS PR00075 Fatty acid desaturase family 1 signature 53 82 1.1E-25 T 13-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 VEA_000292 b8271b2d19b636bbea5ee13df4858556 329 PRINTS PR00075 Fatty acid desaturase family 1 signature 143 164 1.1E-25 T 13-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 VEA_000292 b8271b2d19b636bbea5ee13df4858556 329 PRINTS PR00075 Fatty acid desaturase family 1 signature 186 200 1.1E-25 T 13-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 VEA_000292 b8271b2d19b636bbea5ee13df4858556 329 PRINTS PR00075 Fatty acid desaturase family 1 signature 15 35 1.1E-25 T 13-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 VEA_000292 b8271b2d19b636bbea5ee13df4858556 329 Pfam PF00487 Fatty acid desaturase 8 217 8.3E-21 T 13-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 VEA_001292 6ec887d675abb84bf3cfddfb8d28893d 395 SUPERFAMILY SSF55961 169 391 1.73E-46 T 13-10-2018 VEA_001292 6ec887d675abb84bf3cfddfb8d28893d 395 Gene3D G3DSA:3.90.380.10 25 385 4.1E-66 T 13-10-2018 VEA_001292 6ec887d675abb84bf3cfddfb8d28893d 395 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 202 390 1.9E-31 T 13-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 VEA_001292 6ec887d675abb84bf3cfddfb8d28893d 395 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 34 59 1.8E-17 T 13-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 VEA_001292 6ec887d675abb84bf3cfddfb8d28893d 395 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 106 126 1.8E-17 T 13-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 VEA_001292 6ec887d675abb84bf3cfddfb8d28893d 395 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 196 218 1.8E-17 T 13-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 VEA_001292 6ec887d675abb84bf3cfddfb8d28893d 395 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 85 105 1.8E-17 T 13-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 VEA_001292 6ec887d675abb84bf3cfddfb8d28893d 395 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 152 178 1.8E-17 T 13-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 VEA_001292 6ec887d675abb84bf3cfddfb8d28893d 395 Pfam PF00355 Rieske [2Fe-2S] domain 49 134 5.0E-17 T 13-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 VEA_001292 6ec887d675abb84bf3cfddfb8d28893d 395 SUPERFAMILY SSF50022 15 167 4.98E-42 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VEA_001292 6ec887d675abb84bf3cfddfb8d28893d 395 Gene3D G3DSA:2.102.10.10 47 172 4.1E-66 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VEA_004252 9f8e11ab3c7f5dc031701d2be0c8676d 306 SUPERFAMILY SSF53850 92 296 1.57E-38 T 13-10-2018 VEA_004252 9f8e11ab3c7f5dc031701d2be0c8676d 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 2.8E-20 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_004252 9f8e11ab3c7f5dc031701d2be0c8676d 306 SUPERFAMILY SSF46785 3 85 6.06E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_004252 9f8e11ab3c7f5dc031701d2be0c8676d 306 Gene3D G3DSA:1.10.10.10 7 95 2.0E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_004252 9f8e11ab3c7f5dc031701d2be0c8676d 306 Pfam PF03466 LysR substrate binding domain 91 291 2.7E-37 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_004252 9f8e11ab3c7f5dc031701d2be0c8676d 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.9E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_004252 9f8e11ab3c7f5dc031701d2be0c8676d 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.9E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_004252 9f8e11ab3c7f5dc031701d2be0c8676d 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.9E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_004252 9f8e11ab3c7f5dc031701d2be0c8676d 306 Gene3D G3DSA:3.40.190.10 103 288 4.0E-58 T 13-10-2018 VEA_004252 9f8e11ab3c7f5dc031701d2be0c8676d 306 Gene3D G3DSA:3.40.190.10 163 261 4.0E-58 T 13-10-2018 VEA_003770 42cd39a3292e6ead3b0cc50d5d2babb9 223 SMART SM00382 30 218 2.0E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_003770 42cd39a3292e6ead3b0cc50d5d2babb9 223 Pfam PF00005 ABC transporter 21 167 3.8E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_003770 42cd39a3292e6ead3b0cc50d5d2babb9 223 SUPERFAMILY SSF52540 1 217 7.55E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003770 42cd39a3292e6ead3b0cc50d5d2babb9 223 Gene3D G3DSA:3.40.50.300 1 223 2.3E-57 T 13-10-2018 VEA_003808 33d1b7b8c5ced5ec1cb3636652421359 188 SUPERFAMILY SSF48150 5 186 2.82E-74 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 VEA_003808 33d1b7b8c5ced5ec1cb3636652421359 188 Pfam PF03352 Methyladenine glycosylase 9 184 5.5E-73 T 13-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 VEA_003808 33d1b7b8c5ced5ec1cb3636652421359 188 Gene3D G3DSA:1.10.340.30 4 188 7.9E-77 T 13-10-2018 VEA_000779 03386d8c1262bf249994c919f8ea87b4 239 Pfam PF00194 Eukaryotic-type carbonic anhydrase 22 238 1.2E-50 T 13-10-2018 IPR001148 Alpha carbonic anhydrase domain VEA_000779 03386d8c1262bf249994c919f8ea87b4 239 Gene3D G3DSA:3.10.200.10 22 238 1.7E-81 T 13-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily VEA_000779 03386d8c1262bf249994c919f8ea87b4 239 SUPERFAMILY SSF51069 22 237 1.03E-74 T 13-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily VEA_000779 03386d8c1262bf249994c919f8ea87b4 239 SMART SM01057 23 239 2.0E-93 T 13-10-2018 IPR001148 Alpha carbonic anhydrase domain VEA_000779 03386d8c1262bf249994c919f8ea87b4 239 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 110 126 - T 13-10-2018 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117|Reactome: R-HSA-1475029 VEA_004275 deb2eb81c0f559afd682e7e6f563ea8c 355 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 50 317 3.5E-72 T 13-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VEA_004275 deb2eb81c0f559afd682e7e6f563ea8c 355 SUPERFAMILY SSF53187 22 318 1.85E-77 T 13-10-2018 VEA_004275 deb2eb81c0f559afd682e7e6f563ea8c 355 PIRSF PIRSF039012 3 324 3.6E-94 T 13-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VEA_004275 deb2eb81c0f559afd682e7e6f563ea8c 355 Gene3D G3DSA:3.40.630.10 14 320 1.6E-93 T 13-10-2018 VEA_001770 90209ff00998e8c941936bfb732c04e5 292 Gene3D G3DSA:3.90.550.10 2 248 5.2E-47 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEA_001770 90209ff00998e8c941936bfb732c04e5 292 Pfam PF00535 Glycosyl transferase family 2 6 140 1.1E-28 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VEA_001770 90209ff00998e8c941936bfb732c04e5 292 SUPERFAMILY SSF53448 5 214 1.69E-47 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEA_002738 e766ec7f1c60c7c858e16817be92e3f7 237 Gene3D G3DSA:3.40.630.30 48 218 1.1E-26 T 13-10-2018 VEA_002738 e766ec7f1c60c7c858e16817be92e3f7 237 SUPERFAMILY SSF55729 72 215 6.07E-25 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_002738 e766ec7f1c60c7c858e16817be92e3f7 237 Pfam PF13302 Acetyltransferase (GNAT) domain 100 207 7.1E-20 T 13-10-2018 IPR000182 GNAT domain VEA_003660 0ccf06fe9a7ea6640fd9f483a71cde4b 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 230 313 5.2E-23 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VEA_003660 0ccf06fe9a7ea6640fd9f483a71cde4b 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 230 294 1.7E-17 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VEA_003660 0ccf06fe9a7ea6640fd9f483a71cde4b 327 Gene3D G3DSA:3.40.50.300 1 321 5.8E-97 T 13-10-2018 VEA_003660 0ccf06fe9a7ea6640fd9f483a71cde4b 327 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_003660 0ccf06fe9a7ea6640fd9f483a71cde4b 327 SMART SM00382 30 228 4.5E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_003660 0ccf06fe9a7ea6640fd9f483a71cde4b 327 SUPERFAMILY SSF52540 1 249 9.97E-67 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003660 0ccf06fe9a7ea6640fd9f483a71cde4b 327 Pfam PF00005 ABC transporter 22 178 1.3E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_004366 4ecba34503583272c2fb7b576e2a1f89 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 57 75 9.6E-16 T 13-10-2018 IPR003849 Preprotein translocase YajC VEA_004366 4ecba34503583272c2fb7b576e2a1f89 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 19 39 9.6E-16 T 13-10-2018 IPR003849 Preprotein translocase YajC VEA_004366 4ecba34503583272c2fb7b576e2a1f89 109 Pfam PF02699 Preprotein translocase subunit 21 98 3.9E-26 T 13-10-2018 IPR003849 Preprotein translocase YajC VEA_004366 4ecba34503583272c2fb7b576e2a1f89 109 SMART SM01323 17 101 1.9E-38 T 13-10-2018 IPR003849 Preprotein translocase YajC VEA_004366 4ecba34503583272c2fb7b576e2a1f89 109 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 19 101 4.0E-30 T 13-10-2018 IPR003849 Preprotein translocase YajC VEA_000479 e126c3b0894a4ed7366a4d89832aa979 315 Pfam PF03595 Voltage-dependent anion channel 6 298 2.4E-25 T 13-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 VEA_000479 e126c3b0894a4ed7366a4d89832aa979 315 Gene3D G3DSA:1.50.10.150 2 304 5.1E-31 T 13-10-2018 IPR038665 Voltage-dependent anion channel superfamily VEA_000311 e4870932534730e29205537b298332bf 508 Pfam PF00884 Sulfatase 34 359 1.9E-65 T 13-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VEA_000311 e4870932534730e29205537b298332bf 508 SUPERFAMILY SSF53649 30 498 1.74E-127 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VEA_000311 e4870932534730e29205537b298332bf 508 Gene3D G3DSA:3.40.720.10 34 400 1.2E-98 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VEA_000311 e4870932534730e29205537b298332bf 508 Gene3D G3DSA:3.30.1120.10 401 460 1.2E-98 T 13-10-2018 VEA_000311 e4870932534730e29205537b298332bf 508 Pfam PF14707 C-terminal region of aryl-sulfatase 399 498 5.4E-7 T 13-10-2018 VEA_000132 647abd53fba86923c6e3bc8ff66ccb7a 53 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 48 4.0E-18 T 13-10-2018 IPR005371 Uncharacterised protein family UPF0181 VEA_000132 647abd53fba86923c6e3bc8ff66ccb7a 53 Hamap MF_00507 UPF0181 protein YoaH [yoaH]. 1 53 17.418 T 13-10-2018 IPR005371 Uncharacterised protein family UPF0181 VEA_000132 647abd53fba86923c6e3bc8ff66ccb7a 53 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 49 3.7E-25 T 13-10-2018 IPR005371 Uncharacterised protein family UPF0181 VEA_003299 40f0ac4bda79831d100a7de06fdc8893 202 TIGRFAM TIGR04025 PPOX_FMN_DR2398: pyridoxamine 5'-phosphate oxidase, FMN-binding family 8 202 3.6E-72 T 13-10-2018 IPR024029 Pyridoxamine 5-phosphate oxidase, FMN-dependent VEA_003299 40f0ac4bda79831d100a7de06fdc8893 202 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 35 122 4.1E-12 T 13-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VEA_003299 40f0ac4bda79831d100a7de06fdc8893 202 Gene3D G3DSA:2.30.110.10 20 147 1.3E-22 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VEA_003299 40f0ac4bda79831d100a7de06fdc8893 202 SUPERFAMILY SSF50475 32 151 7.86E-16 T 13-10-2018 VEA_003698 54006e6fd4ffaac817dec48f847c39d7 225 Pfam PF04172 LrgB-like family 6 218 1.0E-69 T 13-10-2018 IPR007300 CidB/LrgB family VEA_001853 b6701e8ecb751d7279042194ea4ee660 347 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 161 341 1.5E-27 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_001853 b6701e8ecb751d7279042194ea4ee660 347 SUPERFAMILY SSF161098 139 325 3.14E-20 T 13-10-2018 IPR035906 MetI-like superfamily VEA_001853 b6701e8ecb751d7279042194ea4ee660 347 Gene3D G3DSA:1.10.3720.10 133 339 1.1E-18 T 13-10-2018 IPR035906 MetI-like superfamily VEA_003978 e9bb0ab3ca6a5a5181e6430dc69bd532 246 Gene3D G3DSA:3.20.20.70 2 246 1.5E-105 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_003978 e9bb0ab3ca6a5a5181e6430dc69bd532 246 SUPERFAMILY SSF102114 23 220 9.81E-30 T 13-10-2018 VEA_003978 e9bb0ab3ca6a5a5181e6430dc69bd532 246 Pfam PF13353 4Fe-4S single cluster domain 16 137 1.5E-20 T 13-10-2018 VEA_003978 e9bb0ab3ca6a5a5181e6430dc69bd532 246 PIRSF PIRSF000371 44 244 2.8E-45 T 13-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 VEA_003978 e9bb0ab3ca6a5a5181e6430dc69bd532 246 PIRSF PIRSF000371 1 49 2.1E-11 T 13-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 VEA_003978 e9bb0ab3ca6a5a5181e6430dc69bd532 246 Pfam PF04055 Radical SAM superfamily 24 178 2.8E-32 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VEA_003978 e9bb0ab3ca6a5a5181e6430dc69bd532 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 13-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 VEA_003978 e9bb0ab3ca6a5a5181e6430dc69bd532 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 239 1.3E-109 T 13-10-2018 IPR012838 Pyruvate formate-lyase 1 activating enzyme GO:0043365|GO:0055114 VEA_000921 8e73d09b8a7e3cf46b2a43ddb6a18b22 109 SUPERFAMILY SSF51182 9 104 5.5E-23 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily VEA_000921 8e73d09b8a7e3cf46b2a43ddb6a18b22 109 Pfam PF07883 Cupin domain 32 87 2.9E-14 T 13-10-2018 IPR013096 Cupin 2, conserved barrel VEA_000921 8e73d09b8a7e3cf46b2a43ddb6a18b22 109 PIRSF PIRSF029883 1 108 6.1E-38 T 13-10-2018 IPR025499 Pectin degradation protein KdgF VEA_000921 8e73d09b8a7e3cf46b2a43ddb6a18b22 109 Gene3D G3DSA:2.60.120.10 1 109 1.3E-35 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VEA_002283 9c41014ba4deee2b3ef0d6a1bafbe22d 162 Pfam PF09523 Protein of unknown function (DUF2390) 15 115 5.1E-28 T 13-10-2018 IPR012659 Conserved hypothetical protein CHP02444 VEA_002283 9c41014ba4deee2b3ef0d6a1bafbe22d 162 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 13 119 2.1E-34 T 13-10-2018 IPR012659 Conserved hypothetical protein CHP02444 VEA_001871 b6daed3fe952d996a3ecbbf4b8f78e70 131 Pfam PF06476 Protein of unknown function (DUF1090) 18 119 4.3E-34 T 13-10-2018 IPR009468 Protein of unknown function DUF1090 VEA_001142 f37a888f60802c618fa2c3ab58b40bdb 228 SUPERFAMILY SSF81324 126 220 4.32E-18 T 13-10-2018 VEA_001142 f37a888f60802c618fa2c3ab58b40bdb 228 Pfam PF07885 Ion channel 134 217 3.9E-17 T 13-10-2018 IPR013099 Potassium channel domain VEA_001142 f37a888f60802c618fa2c3ab58b40bdb 228 Gene3D G3DSA:1.10.287.70 123 227 1.2E-20 T 13-10-2018 VEA_001996 fb525932fe138c65d72bdcc0f5e140cb 184 Pfam PF01169 Uncharacterized protein family UPF0016 7 80 1.7E-20 T 13-10-2018 IPR001727 Gdt1 family VEA_001996 fb525932fe138c65d72bdcc0f5e140cb 184 Pfam PF01169 Uncharacterized protein family UPF0016 103 178 1.5E-20 T 13-10-2018 IPR001727 Gdt1 family VEA_002379 3841b4e5a091d76eca55384ee3487c43 187 SUPERFAMILY SSF54523 12 118 1.96E-6 T 13-10-2018 VEA_002379 3841b4e5a091d76eca55384ee3487c43 187 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEA_002379 3841b4e5a091d76eca55384ee3487c43 187 Pfam PF07963 Prokaryotic N-terminal methylation motif 9 30 6.9E-7 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEA_002379 3841b4e5a091d76eca55384ee3487c43 187 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 30 8.9E-7 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEA_004108 fb94293011ab7e01e7e329ec8a868e34 261 Pfam PF00950 ABC 3 transport family 1 256 1.7E-74 T 13-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 VEA_004108 fb94293011ab7e01e7e329ec8a868e34 261 SUPERFAMILY SSF81345 2 253 1.7E-38 T 13-10-2018 IPR037294 ABC transporter, BtuC-like VEA_004108 fb94293011ab7e01e7e329ec8a868e34 261 Gene3D G3DSA:1.10.3470.10 28 253 1.2E-7 T 13-10-2018 IPR037294 ABC transporter, BtuC-like VEA_003022 934acc7ed20d52b748068b669406e0b0 98 Pfam PF06305 Lipopolysaccharide assembly protein A domain 22 81 4.1E-18 T 13-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 VEA_003022 934acc7ed20d52b748068b669406e0b0 98 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 93 20.327 T 13-10-2018 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 VEA_003267 22295a3480f537e70d9803796bda1d0f 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 3.3E-13 T 13-10-2018 IPR021681 Protein of unknown function DUF3265 VEA_001032 6e6048b59babdc1ecdd15d341c3bd6fc 238 Gene3D G3DSA:1.20.1290.10 15 238 3.4E-53 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 VEA_001032 6e6048b59babdc1ecdd15d341c3bd6fc 238 Pfam PF02627 Carboxymuconolactone decarboxylase family 29 93 1.3E-6 T 13-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 VEA_001032 6e6048b59babdc1ecdd15d341c3bd6fc 238 Pfam PF02627 Carboxymuconolactone decarboxylase family 149 233 6.5E-11 T 13-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 VEA_001032 6e6048b59babdc1ecdd15d341c3bd6fc 238 SUPERFAMILY SSF69118 33 237 3.26E-42 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 VEA_001351 ecc68ab1205b3fa66de51569a87223da 345 Pfam PF01032 FecCD transport family 19 338 1.8E-90 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VEA_001351 ecc68ab1205b3fa66de51569a87223da 345 SUPERFAMILY SSF81345 5 339 8.76E-83 T 13-10-2018 IPR037294 ABC transporter, BtuC-like VEA_001351 ecc68ab1205b3fa66de51569a87223da 345 Gene3D G3DSA:1.10.3470.10 5 344 9.7E-105 T 13-10-2018 IPR037294 ABC transporter, BtuC-like VEA_003394 73e7829d158109938facf484d50cc6c6 443 Pfam PF02839 Carbohydrate binding domain 407 432 5.4E-5 T 13-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VEA_003394 73e7829d158109938facf484d50cc6c6 443 Gene3D G3DSA:2.40.10.10 46 255 7.9E-59 T 13-10-2018 VEA_003394 73e7829d158109938facf484d50cc6c6 443 SMART SM00020 33 260 4.5E-60 T 13-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VEA_003394 73e7829d158109938facf484d50cc6c6 443 Gene3D G3DSA:2.10.10.20 390 433 4.6E-17 T 13-10-2018 VEA_003394 73e7829d158109938facf484d50cc6c6 443 Gene3D G3DSA:2.60.40.10 275 383 3.6E-8 T 13-10-2018 IPR013783 Immunoglobulin-like fold VEA_003394 73e7829d158109938facf484d50cc6c6 443 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 72 77 - T 13-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 VEA_003394 73e7829d158109938facf484d50cc6c6 443 Pfam PF00089 Trypsin 34 259 8.9E-47 T 13-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VEA_003394 73e7829d158109938facf484d50cc6c6 443 SUPERFAMILY SSF50494 12 265 1.54E-62 T 13-10-2018 IPR009003 Peptidase S1, PA clan VEA_003394 73e7829d158109938facf484d50cc6c6 443 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 211 222 - T 13-10-2018 IPR033116 Serine proteases, trypsin family, serine active site VEA_003394 73e7829d158109938facf484d50cc6c6 443 Gene3D G3DSA:2.40.10.10 34 254 7.9E-59 T 13-10-2018 VEA_003394 73e7829d158109938facf484d50cc6c6 443 SMART SM00495 390 435 6.5E-13 T 13-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VEA_003394 73e7829d158109938facf484d50cc6c6 443 SUPERFAMILY SSF51055 388 436 3.14E-14 T 13-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VEA_003394 73e7829d158109938facf484d50cc6c6 443 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 210 222 1.2E-11 T 13-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VEA_003394 73e7829d158109938facf484d50cc6c6 443 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 62 77 1.2E-11 T 13-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VEA_003394 73e7829d158109938facf484d50cc6c6 443 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 118 132 1.2E-11 T 13-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VEA_004476 07576c45a0b2b09fff4d2889ef9a1edb 259 Pfam PF01925 Sulfite exporter TauE/SafE 11 246 9.4E-43 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VEA_004039 2bfb0f1f2430f7c9f39d2712dff3fe55 97 Pfam PF12836 Helix-hairpin-helix motif 35 95 2.8E-23 T 13-10-2018 VEA_004039 2bfb0f1f2430f7c9f39d2712dff3fe55 97 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 35 97 1.0E-27 T 13-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain VEA_004039 2bfb0f1f2430f7c9f39d2712dff3fe55 97 SUPERFAMILY SSF47781 31 97 4.0E-28 T 13-10-2018 IPR010994 RuvA domain 2-like VEA_004039 2bfb0f1f2430f7c9f39d2712dff3fe55 97 Gene3D G3DSA:1.10.150.280 25 97 6.2E-24 T 13-10-2018 VEA_004039 2bfb0f1f2430f7c9f39d2712dff3fe55 97 SMART SM00278 45 64 5.2 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VEA_004039 2bfb0f1f2430f7c9f39d2712dff3fe55 97 SMART SM00278 75 94 88.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VEA_000687 253d2868741dddaeb0958ddc91476860 409 Gene3D G3DSA:3.40.50.300 32 322 7.2E-78 T 13-10-2018 VEA_000687 253d2868741dddaeb0958ddc91476860 409 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_000687 253d2868741dddaeb0958ddc91476860 409 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 38 392 1.3E-123 T 13-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 VEA_000687 253d2868741dddaeb0958ddc91476860 409 SUPERFAMILY SSF52540 39 265 1.51E-74 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000687 253d2868741dddaeb0958ddc91476860 409 SUPERFAMILY SSF54631 275 393 8.43E-10 T 13-10-2018 VEA_000687 253d2868741dddaeb0958ddc91476860 409 Pfam PF00005 ABC transporter 45 193 1.1E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_000687 253d2868741dddaeb0958ddc91476860 409 SMART SM00382 54 243 3.8E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_002394 a7a133bacebae8dc58f5d8b4e91b1ab7 250 SUPERFAMILY SSF55120 7 220 7.36E-60 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEA_002394 a7a133bacebae8dc58f5d8b4e91b1ab7 250 Gene3D G3DSA:3.30.2350.10 4 223 5.1E-67 T 13-10-2018 VEA_002394 a7a133bacebae8dc58f5d8b4e91b1ab7 250 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 13-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEA_002394 a7a133bacebae8dc58f5d8b4e91b1ab7 250 Pfam PF00849 RNA pseudouridylate synthase 23 172 1.4E-29 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VEA_002937 211659257d7596e943c6e9d2e2e44cde 425 Pfam PF13726 Na+-H+ antiporter family 1 72 3.9E-28 T 13-10-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal VEA_002937 211659257d7596e943c6e9d2e2e44cde 425 Pfam PF03553 Na+/H+ antiporter family 134 419 1.5E-74 T 13-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VEA_002937 211659257d7596e943c6e9d2e2e44cde 425 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 1.4E-6 T 13-10-2018 VEA_002937 211659257d7596e943c6e9d2e2e44cde 425 PRINTS PR00173 Glutamate-aspartate symporter signature 358 377 1.4E-6 T 13-10-2018 VEA_000985 e5656e194f11a6d2c94c810d4379b7ff 251 SUPERFAMILY SSF53850 28 250 7.49E-22 T 13-10-2018 VEA_000985 e5656e194f11a6d2c94c810d4379b7ff 251 Gene3D G3DSA:3.40.190.10 110 212 9.1E-12 T 13-10-2018 VEA_000985 e5656e194f11a6d2c94c810d4379b7ff 251 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 250 1.1E-7 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEA_000985 e5656e194f11a6d2c94c810d4379b7ff 251 Gene3D G3DSA:3.40.190.10 33 250 9.1E-12 T 13-10-2018 VEA_002050 4ed64c96f2f275d37306c09312f56048 268 Pfam PF07070 SpoOM protein 4 219 7.8E-77 T 13-10-2018 IPR009776 Sporulation stage 0, protein M VEA_003628 883ed647cdccecb5c37828d63f1ef5f8 490 Gene3D G3DSA:1.10.1370.30 1 490 1.2E-196 T 13-10-2018 VEA_003628 883ed647cdccecb5c37828d63f1ef5f8 490 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 9 489 1.6E-99 T 13-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VEA_003628 883ed647cdccecb5c37828d63f1ef5f8 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 397 418 1.5E-45 T 13-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VEA_003628 883ed647cdccecb5c37828d63f1ef5f8 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 327 346 1.5E-45 T 13-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VEA_003628 883ed647cdccecb5c37828d63f1ef5f8 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 261 280 1.5E-45 T 13-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VEA_003628 883ed647cdccecb5c37828d63f1ef5f8 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 441 459 1.5E-45 T 13-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VEA_003628 883ed647cdccecb5c37828d63f1ef5f8 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 145 165 1.5E-45 T 13-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VEA_003628 883ed647cdccecb5c37828d63f1ef5f8 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 241 260 1.5E-45 T 13-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VEA_003628 883ed647cdccecb5c37828d63f1ef5f8 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 288 304 1.5E-45 T 13-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VEA_003628 883ed647cdccecb5c37828d63f1ef5f8 490 SUPERFAMILY SSF55486 1 490 1.67E-117 T 13-10-2018 VEA_003628 883ed647cdccecb5c37828d63f1ef5f8 490 PIRSF PIRSF006615 1 490 2.4E-199 T 13-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VEA_002719 18cafbf143b358d689b5200ddb07086d 247 Pfam PF11101 Protein of unknown function (DUF2884) 21 245 4.6E-72 T 13-10-2018 IPR021307 Protein of unknown function DUF2884 VEA_001039 c908297d4049e42cf6e2fad5f09a291c 228 Pfam PF01965 DJ-1/PfpI family 32 202 8.5E-20 T 13-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 VEA_001039 c908297d4049e42cf6e2fad5f09a291c 228 Gene3D G3DSA:3.40.50.880 22 227 2.9E-48 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VEA_001039 c908297d4049e42cf6e2fad5f09a291c 228 SUPERFAMILY SSF52317 32 222 1.92E-40 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like VEA_000876 22c10bfe06178c7c5afabf374b3c4b6f 155 Gene3D G3DSA:3.40.50.1000 1 155 1.0E-28 T 13-10-2018 IPR023214 HAD superfamily VEA_000876 22c10bfe06178c7c5afabf374b3c4b6f 155 SUPERFAMILY SSF56784 4 141 5.79E-23 T 13-10-2018 IPR036412 HAD-like superfamily VEA_000876 22c10bfe06178c7c5afabf374b3c4b6f 155 Pfam PF13419 Haloacid dehalogenase-like hydrolase 24 130 2.7E-12 T 13-10-2018 VEA_003414 742fa9d449ac00e0113898f1624baf00 249 PIRSF PIRSF039085 5 248 3.1E-110 T 13-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VEA_003414 742fa9d449ac00e0113898f1624baf00 249 SUPERFAMILY SSF52540 8 242 3.27E-82 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003414 742fa9d449ac00e0113898f1624baf00 249 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_003414 742fa9d449ac00e0113898f1624baf00 249 Pfam PF00005 ABC transporter 24 172 3.9E-39 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_003414 742fa9d449ac00e0113898f1624baf00 249 SMART SM00382 33 220 2.8E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_003414 742fa9d449ac00e0113898f1624baf00 249 Gene3D G3DSA:3.40.50.300 6 249 8.7E-80 T 13-10-2018 VEA_002554 66911ee271304030dd74103937f89b3f 169 SUPERFAMILY SSF53271 2 168 1.44E-54 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like VEA_002554 66911ee271304030dd74103937f89b3f 169 Pfam PF00156 Phosphoribosyl transferase domain 5 152 9.5E-25 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VEA_002554 66911ee271304030dd74103937f89b3f 169 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 1 165 7.9E-74 T 13-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 VEA_002554 66911ee271304030dd74103937f89b3f 169 Gene3D G3DSA:3.40.50.2020 1 169 2.1E-64 T 13-10-2018 VEA_004050 198398bbb2c93dff35d2d1b0070a4486 332 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 317 2.8E-104 T 13-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VEA_004050 198398bbb2c93dff35d2d1b0070a4486 332 PIRSF PIRSF006470 1 332 8.3E-124 T 13-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VEA_004050 198398bbb2c93dff35d2d1b0070a4486 332 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 33 277 2.2E-80 T 13-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VEA_004050 198398bbb2c93dff35d2d1b0070a4486 332 Gene3D G3DSA:3.40.190.170 27 328 1.3E-90 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VEA_002635 258118df22618239d9cd97cdb0bf414f 782 Gene3D G3DSA:2.40.10.220 466 584 9.4E-8 T 13-10-2018 VEA_002635 258118df22618239d9cd97cdb0bf414f 782 SUPERFAMILY SSF141371 466 554 1.96E-7 T 13-10-2018 VEA_002635 258118df22618239d9cd97cdb0bf414f 782 Pfam PF07238 PilZ domain 145 228 2.2E-7 T 13-10-2018 IPR009875 PilZ domain GO:0035438 VEA_002635 258118df22618239d9cd97cdb0bf414f 782 Pfam PF07238 PilZ domain 470 560 2.8E-13 T 13-10-2018 IPR009875 PilZ domain GO:0035438 VEA_002709 ad6c73b8676d057f7d2c13c56f1a73a3 256 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 6 253 35.632 T 13-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 VEA_002709 ad6c73b8676d057f7d2c13c56f1a73a3 256 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 5 249 1.8E-94 T 13-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 VEA_002709 ad6c73b8676d057f7d2c13c56f1a73a3 256 PIRSF PIRSF009437 1 256 5.9E-103 T 13-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 VEA_002709 ad6c73b8676d057f7d2c13c56f1a73a3 256 SMART SM00900 143 241 1.8E-32 T 13-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 VEA_002709 ad6c73b8676d057f7d2c13c56f1a73a3 256 Pfam PF04205 FMN-binding domain 143 238 3.7E-15 T 13-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 VEA_003619 02ec5f93403eb7ca66e4cc105489c211 649 Gene3D G3DSA:3.40.720.10 276 572 2.6E-204 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VEA_003619 02ec5f93403eb7ca66e4cc105489c211 649 PIRSF PIRSF005091 16 646 4.4E-101 T 13-10-2018 IPR012160 Lipoteichoic acid synthase-like VEA_003619 02ec5f93403eb7ca66e4cc105489c211 649 Pfam PF00884 Sulfatase 285 555 2.3E-50 T 13-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VEA_003619 02ec5f93403eb7ca66e4cc105489c211 649 SUPERFAMILY SSF53649 283 595 1.96E-69 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VEA_003619 02ec5f93403eb7ca66e4cc105489c211 649 Gene3D G3DSA:3.30.1120.80 248 644 2.6E-204 T 13-10-2018 VEA_000419 757b71ea8b4bb116057602f9d5c5cf19 311 SUPERFAMILY SSF52402 1 142 5.02E-11 T 13-10-2018 VEA_000419 757b71ea8b4bb116057602f9d5c5cf19 311 Pfam PF00582 Universal stress protein family 151 301 3.2E-16 T 13-10-2018 IPR006016 UspA VEA_000419 757b71ea8b4bb116057602f9d5c5cf19 311 SUPERFAMILY SSF52402 151 309 1.0E-20 T 13-10-2018 VEA_000419 757b71ea8b4bb116057602f9d5c5cf19 311 Gene3D G3DSA:3.40.50.12370 1 311 6.3E-85 T 13-10-2018 VEA_003469 487df863603d25f7619264723d3ac43e 57 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 6 45 3.3E-10 T 13-10-2018 IPR008621 Cbb3-type cytochrome oxidase component VEA_003525 559919aa8e1eb26cd9fed57c7a44e175 332 Pfam PF11279 Protein of unknown function (DUF3080) 26 329 1.1E-85 T 13-10-2018 IPR021431 Protein of unknown function DUF3080 VEA_003014 844d5da4dc83aed4edff96713df0ed37 1024 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 4 969 1.1E-154 T 13-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_003014 844d5da4dc83aed4edff96713df0ed37 1024 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 3 1024 13.165 T 13-10-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_003014 844d5da4dc83aed4edff96713df0ed37 1024 Pfam PF14579 Helix-hairpin-helix motif 768 855 6.3E-14 T 13-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_003014 844d5da4dc83aed4edff96713df0ed37 1024 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 270 694 1.8E-147 T 13-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VEA_003014 844d5da4dc83aed4edff96713df0ed37 1024 Pfam PF01336 OB-fold nucleic acid binding domain 934 996 4.1E-8 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VEA_003014 844d5da4dc83aed4edff96713df0ed37 1024 Gene3D G3DSA:3.20.20.140 1 247 2.2E-36 T 13-10-2018 VEA_003014 844d5da4dc83aed4edff96713df0ed37 1024 Pfam PF02811 PHP domain 8 100 3.5E-8 T 13-10-2018 IPR004013 PHP domain GO:0003824 VEA_003014 844d5da4dc83aed4edff96713df0ed37 1024 SMART SM00481 4 73 6.7E-7 T 13-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal VEA_003193 808fbc6100ab154b6be70a69060b9f36 181 SUPERFAMILY SSF55729 42 177 8.15E-22 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_003193 808fbc6100ab154b6be70a69060b9f36 181 Gene3D G3DSA:3.40.630.30 2 179 9.3E-24 T 13-10-2018 VEA_003193 808fbc6100ab154b6be70a69060b9f36 181 Pfam PF13420 Acetyltransferase (GNAT) domain 57 163 1.6E-11 T 13-10-2018 VEA_002909 ec5b020fed1a8f006e4321a12d6973b9 136 Pfam PF01641 SelR domain 14 132 7.0E-54 T 13-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VEA_002909 ec5b020fed1a8f006e4321a12d6973b9 136 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 10 134 3.2E-57 T 13-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VEA_002909 ec5b020fed1a8f006e4321a12d6973b9 136 SUPERFAMILY SSF51316 9 135 1.26E-58 T 13-10-2018 IPR011057 Mss4-like superfamily VEA_002909 ec5b020fed1a8f006e4321a12d6973b9 136 Gene3D G3DSA:2.170.150.20 2 136 4.0E-61 T 13-10-2018 VEA_002909 ec5b020fed1a8f006e4321a12d6973b9 136 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 11 134 37.36 T 13-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VEA_003058 c985842bcb2f9486ad2da2eb3f096b54 180 Pfam PF00857 Isochorismatase family 7 155 4.4E-30 T 13-10-2018 IPR000868 Isochorismatase-like GO:0003824 VEA_003058 c985842bcb2f9486ad2da2eb3f096b54 180 SUPERFAMILY SSF52499 1 180 1.44E-45 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 VEA_003058 c985842bcb2f9486ad2da2eb3f096b54 180 Gene3D G3DSA:3.40.50.850 1 180 5.5E-47 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 VEA_000288 13711ea3be0eb5c1414f2373c6e251d2 393 Gene3D G3DSA:3.40.640.10 59 290 1.4E-136 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VEA_000288 13711ea3be0eb5c1414f2373c6e251d2 393 SUPERFAMILY SSF53383 43 385 1.08E-72 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VEA_000288 13711ea3be0eb5c1414f2373c6e251d2 393 Pfam PF00155 Aminotransferase class I and II 46 379 3.7E-29 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VEA_000288 13711ea3be0eb5c1414f2373c6e251d2 393 Gene3D G3DSA:3.90.1150.10 21 382 1.4E-136 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VEA_001096 d848a50fc9bf062f34d665cbf28b0b2a 405 Gene3D G3DSA:1.10.3860.10 3 405 2.9E-72 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VEA_001096 d848a50fc9bf062f34d665cbf28b0b2a 405 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 3 404 36.56 T 13-10-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 VEA_001096 d848a50fc9bf062f34d665cbf28b0b2a 405 Pfam PF00375 Sodium:dicarboxylate symporter family 15 398 1.8E-65 T 13-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 VEA_001096 d848a50fc9bf062f34d665cbf28b0b2a 405 PRINTS PR00173 Glutamate-aspartate symporter signature 13 33 1.2E-12 T 13-10-2018 VEA_001096 d848a50fc9bf062f34d665cbf28b0b2a 405 PRINTS PR00173 Glutamate-aspartate symporter signature 185 204 1.2E-12 T 13-10-2018 VEA_001096 d848a50fc9bf062f34d665cbf28b0b2a 405 PRINTS PR00173 Glutamate-aspartate symporter signature 220 239 1.2E-12 T 13-10-2018 VEA_001096 d848a50fc9bf062f34d665cbf28b0b2a 405 PRINTS PR00173 Glutamate-aspartate symporter signature 287 313 1.2E-12 T 13-10-2018 VEA_001096 d848a50fc9bf062f34d665cbf28b0b2a 405 PRINTS PR00173 Glutamate-aspartate symporter signature 322 341 1.2E-12 T 13-10-2018 VEA_001096 d848a50fc9bf062f34d665cbf28b0b2a 405 SUPERFAMILY SSF118215 15 400 1.7E-97 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VEA_003168 07f5e4796a2cff041b3ab359ebd23de7 157 Pfam PF11163 Protein of unknown function (DUF2947) 3 154 3.0E-71 T 13-10-2018 IPR021334 Protein of unknown function DUF2947 VEA_004391 80cea0986b836432e1b6a012475de24b 110 Gene3D G3DSA:3.30.429.10 1 110 5.9E-45 T 13-10-2018 IPR014347 Tautomerase/MIF superfamily VEA_004391 80cea0986b836432e1b6a012475de24b 110 SUPERFAMILY SSF55331 1 110 1.08E-37 T 13-10-2018 IPR014347 Tautomerase/MIF superfamily VEA_004391 80cea0986b836432e1b6a012475de24b 110 Pfam PF08921 Domain of unknown function (DUF1904) 1 109 2.4E-38 T 13-10-2018 IPR015017 Protein of unknown function DUF1904 VEA_003104 f3c7a9df8b55c25dfa80ce404cb9e00c 170 Gene3D G3DSA:3.30.70.260 86 170 4.7E-13 T 13-10-2018 VEA_003104 f3c7a9df8b55c25dfa80ce404cb9e00c 170 Pfam PF13740 ACT domain 5 66 1.0E-9 T 13-10-2018 VEA_003104 f3c7a9df8b55c25dfa80ce404cb9e00c 170 SUPERFAMILY SSF55021 89 167 2.11E-10 T 13-10-2018 VEA_003104 f3c7a9df8b55c25dfa80ce404cb9e00c 170 PIRSF PIRSF028103 1 169 3.6E-41 T 13-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 VEA_003160 b6f2ebcdc5fd8c49d16dea3c16003ade 453 Pfam PF04715 Anthranilate synthase component I, N terminal region 19 154 1.4E-28 T 13-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VEA_003160 b6f2ebcdc5fd8c49d16dea3c16003ade 453 PRINTS PR00095 Anthranilate synthase component I signature 386 400 9.4E-18 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VEA_003160 b6f2ebcdc5fd8c49d16dea3c16003ade 453 PRINTS PR00095 Anthranilate synthase component I signature 306 319 9.4E-18 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VEA_003160 b6f2ebcdc5fd8c49d16dea3c16003ade 453 PRINTS PR00095 Anthranilate synthase component I signature 401 415 9.4E-18 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VEA_003160 b6f2ebcdc5fd8c49d16dea3c16003ade 453 PRINTS PR00095 Anthranilate synthase component I signature 292 305 9.4E-18 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VEA_003160 b6f2ebcdc5fd8c49d16dea3c16003ade 453 SUPERFAMILY SSF56322 11 453 8.9E-144 T 13-10-2018 IPR005801 ADC synthase GO:0009058 VEA_003160 b6f2ebcdc5fd8c49d16dea3c16003ade 453 Pfam PF00425 chorismate binding enzyme 191 444 1.9E-98 T 13-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal VEA_003160 b6f2ebcdc5fd8c49d16dea3c16003ade 453 Gene3D G3DSA:3.60.120.10 4 453 5.2E-173 T 13-10-2018 IPR005801 ADC synthase GO:0009058 VEA_003160 b6f2ebcdc5fd8c49d16dea3c16003ade 453 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 109 445 8.1E-122 T 13-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 VEA_000175 6cf8001b34030e14a9b1cac97220a896 198 PIRSF PIRSF020606 1 198 5.4E-82 T 13-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 VEA_000175 6cf8001b34030e14a9b1cac97220a896 198 Pfam PF09997 Predicted membrane protein (DUF2238) 41 176 5.7E-51 T 13-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 VEA_000036 3a4474e750ca9d096530561e3232fb4f 341 Gene3D G3DSA:3.40.190.170 32 340 1.5E-60 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VEA_000036 3a4474e750ca9d096530561e3232fb4f 341 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 39 317 3.1E-38 T 13-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VEA_000716 e76cddde11a84af44f68b0425e3b2e60 175 SUPERFAMILY SSF46689 3 69 1.65E-15 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_000716 e76cddde11a84af44f68b0425e3b2e60 175 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 54 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VEA_000716 e76cddde11a84af44f68b0425e3b2e60 175 Gene3D G3DSA:1.10.357.10 1 174 3.8E-25 T 13-10-2018 VEA_000716 e76cddde11a84af44f68b0425e3b2e60 175 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 56 1.5E-15 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEA_000716 e76cddde11a84af44f68b0425e3b2e60 175 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 7.1E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEA_000716 e76cddde11a84af44f68b0425e3b2e60 175 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 7.1E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEA_000623 9a4a6e8af8e5fe352b2310e68e14ec3b 209 Pfam PF04399 Glutaredoxin 2, C terminal domain 85 208 4.8E-34 T 13-10-2018 IPR007494 Glutaredoxin 2, C-terminal VEA_000623 9a4a6e8af8e5fe352b2310e68e14ec3b 209 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 74 4.8E-12 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VEA_000623 9a4a6e8af8e5fe352b2310e68e14ec3b 209 TIGRFAM TIGR02182 GRXB: glutaredoxin, GrxB family 2 208 2.8E-72 T 13-10-2018 IPR011901 Glutaredoxin-2 GO:0005829|GO:0097573 VEA_000623 9a4a6e8af8e5fe352b2310e68e14ec3b 209 SUPERFAMILY SSF52833 1 86 1.34E-14 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VEA_000623 9a4a6e8af8e5fe352b2310e68e14ec3b 209 Gene3D G3DSA:3.40.30.10 8 92 4.6E-22 T 13-10-2018 VEA_000623 9a4a6e8af8e5fe352b2310e68e14ec3b 209 Gene3D G3DSA:1.20.1050.10 93 209 3.6E-21 T 13-10-2018 VEA_000623 9a4a6e8af8e5fe352b2310e68e14ec3b 209 SUPERFAMILY SSF47616 77 208 2.92E-40 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VEA_003827 0079ad21dd1a0e313f89c2a2536d047c 59 Pfam PF06796 Periplasmic nitrate reductase protein NapE 5 55 3.1E-25 T 13-10-2018 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE VEA_003827 0079ad21dd1a0e313f89c2a2536d047c 59 TIGRFAM TIGR02972 TMAO_torE: trimethylamine N-oxide reductase system, TorE protein 8 57 3.7E-29 T 13-10-2018 IPR014316 Trimethylamine N-oxide reductase system, TorE VEA_001063 134192f4949f9ec1af2eefda384f0bed 580 Pfam PF04183 IucA / IucC family 134 354 1.2E-51 T 13-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 VEA_001063 134192f4949f9ec1af2eefda384f0bed 580 Gene3D G3DSA:3.10.450.440 16 82 4.5E-5 T 13-10-2018 VEA_001063 134192f4949f9ec1af2eefda384f0bed 580 Gene3D G3DSA:1.10.150.640 2 120 4.5E-5 T 13-10-2018 VEA_001063 134192f4949f9ec1af2eefda384f0bed 580 Gene3D G3DSA:1.10.340.60 468 539 9.6E-21 T 13-10-2018 VEA_001063 134192f4949f9ec1af2eefda384f0bed 580 Pfam PF06276 Ferric iron reductase FhuF-like transporter 401 559 9.2E-29 T 13-10-2018 IPR022770 Ferric iron reductase FhuF domain VEA_001163 6c7cd1ee1c866ada37f6e4acf10e3ca5 125 SUPERFAMILY SSF50729 10 124 3.14E-39 T 13-10-2018 VEA_001163 6c7cd1ee1c866ada37f6e4acf10e3ca5 125 Pfam PF08000 Bacterial PH domain 5 123 1.1E-39 T 13-10-2018 IPR012544 Bacterial Pleckstrin homology domain VEA_001163 6c7cd1ee1c866ada37f6e4acf10e3ca5 125 Gene3D G3DSA:2.30.29.50 4 125 3.3E-38 T 13-10-2018 IPR037063 Bacterial Pleckstrin homology domain superfamily VEA_003381 ea1021ae3cb4c2788be856c14ec6b04e 171 Gene3D G3DSA:3.40.50.300 1 171 5.0E-9 T 13-10-2018 VEA_003381 ea1021ae3cb4c2788be856c14ec6b04e 171 SUPERFAMILY SSF52540 1 159 1.48E-13 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002534 481245ac8ebaf9734101b2e40b0c72ba 264 Pfam PF01578 Cytochrome C assembly protein 39 262 3.5E-46 T 13-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VEA_000756 e34edb9097fa4af681bcb4ed67951169 374 SUPERFAMILY SSF53187 106 372 3.07E-64 T 13-10-2018 VEA_000756 e34edb9097fa4af681bcb4ed67951169 374 Pfam PF00246 Zinc carboxypeptidase 129 341 1.3E-23 T 13-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 VEA_000756 e34edb9097fa4af681bcb4ed67951169 374 SMART SM00631 112 354 3.2E-4 T 13-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 VEA_000756 e34edb9097fa4af681bcb4ed67951169 374 Gene3D G3DSA:3.40.630.10 113 374 6.5E-72 T 13-10-2018 VEA_000756 e34edb9097fa4af681bcb4ed67951169 374 Gene3D G3DSA:2.60.40.3120 1 112 1.0E-42 T 13-10-2018 VEA_003838 3e62d0cc3cf165ba8a75cbb6a430219a 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 160 4.0E-48 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VEA_003838 3e62d0cc3cf165ba8a75cbb6a430219a 164 PIRSF PIRSF001467 1 163 4.7E-28 T 13-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 VEA_003838 3e62d0cc3cf165ba8a75cbb6a430219a 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 7.7E-12 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VEA_003838 3e62d0cc3cf165ba8a75cbb6a430219a 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 7.7E-12 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VEA_003838 3e62d0cc3cf165ba8a75cbb6a430219a 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 7.7E-12 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VEA_003838 3e62d0cc3cf165ba8a75cbb6a430219a 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 13-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 VEA_003838 3e62d0cc3cf165ba8a75cbb6a430219a 164 Gene3D G3DSA:2.40.100.10 1 164 1.4E-66 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily VEA_003838 3e62d0cc3cf165ba8a75cbb6a430219a 164 SUPERFAMILY SSF50891 1 162 9.94E-59 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily VEA_001324 e15a3bbcc1d2e151fc353df9bc377910 177 SUPERFAMILY SSF142984 103 139 6.8E-5 T 13-10-2018 VEA_001324 e15a3bbcc1d2e151fc353df9bc377910 177 Pfam PF02563 Polysaccharide biosynthesis/export protein 24 99 4.1E-17 T 13-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 VEA_001324 e15a3bbcc1d2e151fc353df9bc377910 177 Gene3D G3DSA:3.30.1950.10 31 103 1.2E-22 T 13-10-2018 VEA_001324 e15a3bbcc1d2e151fc353df9bc377910 177 Gene3D G3DSA:3.10.560.10 20 163 1.2E-22 T 13-10-2018 VEA_001324 e15a3bbcc1d2e151fc353df9bc377910 177 Pfam PF10531 SLBB domain 105 158 8.8E-16 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEA_003336 5c448a4a757ff43de315043beccf18d7 142 Gene3D G3DSA:3.30.1460.10 2 128 5.5E-27 T 13-10-2018 VEA_003336 5c448a4a757ff43de315043beccf18d7 142 Pfam PF05932 Tir chaperone protein (CesT) family 4 123 8.9E-19 T 13-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 VEA_003336 5c448a4a757ff43de315043beccf18d7 142 TIGRFAM TIGR02513 type_III_yscB: type III secretion system chaperone, YscB family 3 142 4.1E-49 T 13-10-2018 IPR013353 Type III secretion system chaperone YscB VEA_003336 5c448a4a757ff43de315043beccf18d7 142 SUPERFAMILY SSF69635 3 128 1.02E-51 T 13-10-2018 VEA_000919 278a6fdc8bc1d42e27c745470bb73214 303 Pfam PF07859 alpha/beta hydrolase fold 75 273 9.7E-9 T 13-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 VEA_000919 278a6fdc8bc1d42e27c745470bb73214 303 SUPERFAMILY SSF53474 57 293 1.01E-28 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_000919 278a6fdc8bc1d42e27c745470bb73214 303 Gene3D G3DSA:3.40.50.1820 55 299 3.7E-50 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_002243 878b828c732b994763302c23aeed2377 273 PIRSF PIRSF000441 75 266 1.0E-55 T 13-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VEA_002243 878b828c732b994763302c23aeed2377 273 PIRSF PIRSF000441 7 72 41.0 T 13-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VEA_002243 878b828c732b994763302c23aeed2377 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VEA_002243 878b828c732b994763302c23aeed2377 273 Gene3D G3DSA:2.160.10.10 143 273 1.2E-37 T 13-10-2018 VEA_002243 878b828c732b994763302c23aeed2377 273 Gene3D G3DSA:1.10.3130.10 1 142 2.4E-52 T 13-10-2018 VEA_002243 878b828c732b994763302c23aeed2377 273 SMART SM00971 9 113 9.8E-60 T 13-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VEA_002243 878b828c732b994763302c23aeed2377 273 SUPERFAMILY SSF51161 8 258 2.77E-63 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily VEA_002243 878b828c732b994763302c23aeed2377 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 112 2.4E-37 T 13-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VEA_002243 878b828c732b994763302c23aeed2377 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 3.6E-9 T 13-10-2018 IPR001451 Hexapeptide repeat VEA_002243 878b828c732b994763302c23aeed2377 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 82 242 2.1E-74 T 13-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VEA_001662 406a17e8cc3f32634d492d15b27b8384 781 Pfam PF04453 Organic solvent tolerance protein 297 682 5.0E-113 T 13-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 VEA_001662 406a17e8cc3f32634d492d15b27b8384 781 Pfam PF03968 OstA-like protein 58 189 9.9E-17 T 13-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal VEA_001662 406a17e8cc3f32634d492d15b27b8384 781 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 4 753 20.129 T 13-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 VEA_001662 406a17e8cc3f32634d492d15b27b8384 781 Gene3D G3DSA:2.60.450.10 49 98 3.2E-6 T 13-10-2018 VEA_000016 450069cff78c8d827f2eff02eeb5a726 1172 Pfam PF06744 Type VI secretion protein IcmF C-terminal 927 1120 2.5E-59 T 13-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal VEA_000016 450069cff78c8d827f2eff02eeb5a726 1172 Pfam PF14331 ImcF-related N-terminal domain 193 450 4.0E-87 T 13-10-2018 IPR025743 ImcF-related, N-terminal domain VEA_000016 450069cff78c8d827f2eff02eeb5a726 1172 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 17 1169 0.0 T 13-10-2018 IPR017731 Type VI secretion system, IcmF VEA_000016 450069cff78c8d827f2eff02eeb5a726 1172 Pfam PF06761 Intracellular multiplication and human macrophage-killing 503 803 4.5E-76 T 13-10-2018 IPR009612 ImcF-related VEA_000016 450069cff78c8d827f2eff02eeb5a726 1172 SUPERFAMILY SSF52540 123 290 2.15E-13 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000016 450069cff78c8d827f2eff02eeb5a726 1172 Gene3D G3DSA:3.40.50.300 85 308 2.3E-5 T 13-10-2018 VEA_002639 1806c8b84deb98bf6d76efdecb408906 563 Gene3D G3DSA:3.40.50.12780 16 436 3.9E-84 T 13-10-2018 VEA_002639 1806c8b84deb98bf6d76efdecb408906 563 Pfam PF00501 AMP-binding enzyme 23 440 1.1E-86 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VEA_002639 1806c8b84deb98bf6d76efdecb408906 563 SUPERFAMILY SSF56801 17 547 7.72E-109 T 13-10-2018 VEA_002639 1806c8b84deb98bf6d76efdecb408906 563 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 13-10-2018 IPR020845 AMP-binding, conserved site VEA_001271 062149639eb5f595dde0afbd7f274bce 308 Pfam PF01882 Protein of unknown function DUF58 54 138 1.3E-19 T 13-10-2018 IPR002881 Domain of unknown function DUF58 VEA_002347 0eb2a84eba4e5039ae6f5e3724ed6762 71 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 64 3.5E-24 T 13-10-2018 IPR014318 Phage shock protein, PspG VEA_002347 0eb2a84eba4e5039ae6f5e3724ed6762 71 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 2 63 7.7E-23 T 13-10-2018 IPR014318 Phage shock protein, PspG VEA_000212 fea2543b85e3ad2845f86ffbc1cbe72d 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 357 3.7E-83 T 13-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VEA_000212 fea2543b85e3ad2845f86ffbc1cbe72d 382 SUPERFAMILY SSF56796 2 378 1.44E-99 T 13-10-2018 VEA_000212 fea2543b85e3ad2845f86ffbc1cbe72d 382 Gene3D G3DSA:1.20.1090.10 181 381 5.4E-34 T 13-10-2018 VEA_000212 fea2543b85e3ad2845f86ffbc1cbe72d 382 Gene3D G3DSA:3.40.50.1970 1 180 3.8E-51 T 13-10-2018 VEA_003718 4c05d2c9ddb55bcc741049de7b60e9a5 247 Pfam PF07070 SpoOM protein 2 215 8.5E-64 T 13-10-2018 IPR009776 Sporulation stage 0, protein M VEA_000871 908b7dcfb05b182d541ba332c344073a 815 Pfam PF01568 Molydopterin dinucleotide binding domain 675 791 1.7E-26 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VEA_000871 908b7dcfb05b182d541ba332c344073a 815 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 43 813 0.0 T 13-10-2018 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 VEA_000871 908b7dcfb05b182d541ba332c344073a 815 Gene3D G3DSA:3.90.55.10 83 617 4.0E-220 T 13-10-2018 VEA_000871 908b7dcfb05b182d541ba332c344073a 815 Gene3D G3DSA:3.40.50.740 86 566 4.0E-220 T 13-10-2018 VEA_000871 908b7dcfb05b182d541ba332c344073a 815 SUPERFAMILY SSF50692 670 813 2.03E-42 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VEA_000871 908b7dcfb05b182d541ba332c344073a 815 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 498 515 - T 13-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 VEA_000871 908b7dcfb05b182d541ba332c344073a 815 Gene3D G3DSA:2.40.40.20 651 809 9.3E-47 T 13-10-2018 VEA_000871 908b7dcfb05b182d541ba332c344073a 815 Gene3D G3DSA:3.40.228.10 178 643 4.0E-220 T 13-10-2018 VEA_000871 908b7dcfb05b182d541ba332c344073a 815 SUPERFAMILY SSF53706 47 667 3.01E-165 T 13-10-2018 VEA_000871 908b7dcfb05b182d541ba332c344073a 815 Pfam PF00384 Molybdopterin oxidoreductase 86 555 4.5E-104 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VEA_000871 908b7dcfb05b182d541ba332c344073a 815 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 27 2.4E-5 T 13-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VEA_004148 d52c97f4afae3973eac6713ed5763644 275 Gene3D G3DSA:3.40.50.720 2 264 1.4E-57 T 13-10-2018 VEA_004148 d52c97f4afae3973eac6713ed5763644 275 SUPERFAMILY SSF51735 2 271 3.4E-55 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_004148 d52c97f4afae3973eac6713ed5763644 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 7.7E-17 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_004148 d52c97f4afae3973eac6713ed5763644 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 7.7E-17 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_004148 d52c97f4afae3973eac6713ed5763644 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 7.7E-17 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_004148 d52c97f4afae3973eac6713ed5763644 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 7.7E-17 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_004148 d52c97f4afae3973eac6713ed5763644 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 7.7E-17 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_004148 d52c97f4afae3973eac6713ed5763644 275 Pfam PF00106 short chain dehydrogenase 3 187 7.1E-41 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_004148 d52c97f4afae3973eac6713ed5763644 275 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VEA_002581 339b03ed17bde3becfce423097f19ae7 579 SUPERFAMILY SSF48208 83 565 5.78E-94 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VEA_002581 339b03ed17bde3becfce423097f19ae7 579 Pfam PF00759 Glycosyl hydrolase family 9 98 500 5.5E-23 T 13-10-2018 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VEA_002581 339b03ed17bde3becfce423097f19ae7 579 Pfam PF02927 Cellulase N-terminal ig-like domain 5 84 1.8E-10 T 13-10-2018 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 VEA_002581 339b03ed17bde3becfce423097f19ae7 579 Gene3D G3DSA:2.60.40.10 1 93 1.6E-25 T 13-10-2018 IPR013783 Immunoglobulin-like fold VEA_002581 339b03ed17bde3becfce423097f19ae7 579 SUPERFAMILY SSF81296 2 90 5.88E-15 T 13-10-2018 IPR014756 Immunoglobulin E-set VEA_002581 339b03ed17bde3becfce423097f19ae7 579 Gene3D G3DSA:1.50.10.10 94 579 9.1E-241 T 13-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 VEA_000402 2cabf18d9abe3753452fa532a39d745e 297 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 281 7.2E-32 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VEA_000782 2ec2170d132220b787ad09ce8eefa3a7 179 Pfam PF00293 NUDIX domain 44 153 5.7E-6 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VEA_000782 2ec2170d132220b787ad09ce8eefa3a7 179 Gene3D G3DSA:3.90.79.10 2 177 1.0E-40 T 13-10-2018 VEA_000782 2ec2170d132220b787ad09ce8eefa3a7 179 SUPERFAMILY SSF55811 4 176 4.33E-37 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VEA_001478 d93e12588d0baea5aaab2138c6896638 191 SUPERFAMILY SSF53335 5 186 4.45E-29 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_001478 d93e12588d0baea5aaab2138c6896638 191 Gene3D G3DSA:3.40.50.150 1 177 3.5E-27 T 13-10-2018 VEA_001478 d93e12588d0baea5aaab2138c6896638 191 Pfam PF13489 Methyltransferase domain 35 172 8.1E-15 T 13-10-2018 VEA_002528 71960589259bf3c71cac79bb0006917c 153 Pfam PF09335 SNARE associated Golgi protein 53 146 8.8E-10 T 13-10-2018 IPR032816 SNARE associated Golgi protein VEA_002528 71960589259bf3c71cac79bb0006917c 153 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 24 136 0.001 T 13-10-2018 IPR020143 Uncharacterised protein family, RP436 VEA_000429 c1f2ee1945788375bc6c4facc9cd0948 263 Pfam PF09850 Type VI secretion system protein DotU 47 246 1.1E-49 T 13-10-2018 IPR017732 Type IV / VI secretion system, DotU VEA_000429 c1f2ee1945788375bc6c4facc9cd0948 263 Gene3D G3DSA:1.25.40.590 44 200 2.2E-47 T 13-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily VEA_000429 c1f2ee1945788375bc6c4facc9cd0948 263 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 46 253 9.6E-61 T 13-10-2018 IPR017732 Type IV / VI secretion system, DotU VEA_002239 759ba215405027d241c63745631afbba 124 Pfam PF04892 VanZ like family 36 109 5.7E-9 T 13-10-2018 IPR006976 VanZ-like VEA_001826 3c8a0f2260305511ad18bc5bb27e7db2 213 SUPERFAMILY SSF53271 2 212 1.56E-50 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like VEA_001826 3c8a0f2260305511ad18bc5bb27e7db2 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 1.4E-69 T 13-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VEA_001826 3c8a0f2260305511ad18bc5bb27e7db2 213 Pfam PF00156 Phosphoribosyl transferase domain 43 161 1.0E-12 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VEA_001826 3c8a0f2260305511ad18bc5bb27e7db2 213 Gene3D G3DSA:3.40.50.2020 1 213 1.0E-79 T 13-10-2018 VEA_001826 3c8a0f2260305511ad18bc5bb27e7db2 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 36.279 T 13-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VEA_002193 2575495aef871798a88862dcd2069eba 98 SUPERFAMILY SSF46689 8 98 1.84E-24 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_002193 2575495aef871798a88862dcd2069eba 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 31.402 T 13-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VEA_002193 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 2.0E-31 T 13-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VEA_002193 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 2.0E-31 T 13-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VEA_002193 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 2.0E-31 T 13-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VEA_002193 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 2.0E-31 T 13-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VEA_002193 2575495aef871798a88862dcd2069eba 98 PIRSF PIRSF002097 1 98 2.6E-44 T 13-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VEA_002193 2575495aef871798a88862dcd2069eba 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 4.0E-14 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEA_002193 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 3.3E-13 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEA_002193 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 3.3E-13 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VEA_002193 2575495aef871798a88862dcd2069eba 98 Gene3D G3DSA:1.10.10.60 1 98 2.7E-32 T 13-10-2018 VEA_002380 2f6e82493c1af4d93214e6e440d196b6 253 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEA_002380 2f6e82493c1af4d93214e6e440d196b6 253 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 25 2.2E-7 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEA_002380 2f6e82493c1af4d93214e6e440d196b6 253 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 25 4.5E-7 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site VEA_001196 a78ed7cf3d6ea280895461a1de7d8b9b 129 Pfam PF07361 Cytochrome b562 24 119 8.5E-30 T 13-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 VEA_001196 a78ed7cf3d6ea280895461a1de7d8b9b 129 SUPERFAMILY SSF47175 24 119 2.59E-30 T 13-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 VEA_001196 a78ed7cf3d6ea280895461a1de7d8b9b 129 Gene3D G3DSA:1.20.120.10 18 126 4.6E-14 T 13-10-2018 VEA_002057 7ec96d8e0ae7cd46590b86e49db62343 172 Hamap MF_00163 Peptide deformylase [def]. 2 162 31.105 T 13-10-2018 IPR023635 Peptide deformylase VEA_002057 7ec96d8e0ae7cd46590b86e49db62343 172 PIRSF PIRSF004749 1 172 6.3E-57 T 13-10-2018 IPR023635 Peptide deformylase VEA_002057 7ec96d8e0ae7cd46590b86e49db62343 172 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 159 1.3E-62 T 13-10-2018 IPR023635 Peptide deformylase VEA_002057 7ec96d8e0ae7cd46590b86e49db62343 172 Pfam PF01327 Polypeptide deformylase 4 152 7.3E-51 T 13-10-2018 IPR023635 Peptide deformylase VEA_002057 7ec96d8e0ae7cd46590b86e49db62343 172 PRINTS PR01576 Peptide deformylase signature 33 62 7.5E-38 T 13-10-2018 IPR023635 Peptide deformylase VEA_002057 7ec96d8e0ae7cd46590b86e49db62343 172 PRINTS PR01576 Peptide deformylase signature 101 119 7.5E-38 T 13-10-2018 IPR023635 Peptide deformylase VEA_002057 7ec96d8e0ae7cd46590b86e49db62343 172 PRINTS PR01576 Peptide deformylase signature 120 149 7.5E-38 T 13-10-2018 IPR023635 Peptide deformylase VEA_002057 7ec96d8e0ae7cd46590b86e49db62343 172 PRINTS PR01576 Peptide deformylase signature 89 100 7.5E-38 T 13-10-2018 IPR023635 Peptide deformylase VEA_002057 7ec96d8e0ae7cd46590b86e49db62343 172 SUPERFAMILY SSF56420 3 165 3.53E-63 T 13-10-2018 IPR036821 Peptide deformylase superfamily VEA_002057 7ec96d8e0ae7cd46590b86e49db62343 172 Gene3D G3DSA:3.90.45.10 1 169 4.4E-67 T 13-10-2018 IPR036821 Peptide deformylase superfamily VEA_001051 4489a6ae359074f0b0c600ef708f6a7c 81 Pfam PF11730 Protein of unknown function (DUF3297) 10 80 1.1E-37 T 13-10-2018 IPR021724 Protein of unknown function DUF3297 VEA_003897 c398e5f4e2a9f8e28ce6d84c0d12940e 643 SUPERFAMILY SSF52540 24 356 9.02E-24 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003897 c398e5f4e2a9f8e28ce6d84c0d12940e 643 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 30 339 3.7E-18 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VEA_003897 c398e5f4e2a9f8e28ce6d84c0d12940e 643 Gene3D G3DSA:3.40.50.300 7 360 1.1E-26 T 13-10-2018 VEA_003897 c398e5f4e2a9f8e28ce6d84c0d12940e 643 ProSitePatterns PS00211 ABC transporters family signature. 266 280 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_000922 677d79f62171c78eff2d345af256fbd6 173 Pfam PF10688 Bacterial inner membrane protein 5 163 8.7E-54 T 13-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV VEA_000922 677d79f62171c78eff2d345af256fbd6 173 PIRSF PIRSF011443 2 172 3.7E-66 T 13-10-2018 IPR026267 Inner membrane protein YgjV VEA_000529 412241adeaa1ec36076b80655fc012f3 207 SUPERFAMILY SSF53335 23 171 1.12E-15 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_000529 412241adeaa1ec36076b80655fc012f3 207 Gene3D G3DSA:3.40.50.150 13 196 2.1E-15 T 13-10-2018 VEA_000529 412241adeaa1ec36076b80655fc012f3 207 Pfam PF13649 Methyltransferase domain 55 147 1.3E-9 T 13-10-2018 VEA_000124 b196db2ae1e7c01494d55c998252d7e2 122 Pfam PF10719 Late competence development protein ComFB 8 85 1.7E-16 T 13-10-2018 IPR019657 Late competence development protein ComFB VEA_002261 92035d3753335b20419af0455ff39dbc 401 Pfam PF01145 SPFH domain / Band 7 family 93 264 8.1E-29 T 13-10-2018 IPR001107 Band 7 domain VEA_002261 92035d3753335b20419af0455ff39dbc 401 SMART SM00244 89 249 2.1E-51 T 13-10-2018 IPR001107 Band 7 domain VEA_002261 92035d3753335b20419af0455ff39dbc 401 SUPERFAMILY SSF117892 126 254 1.23E-21 T 13-10-2018 IPR036013 Band 7/SPFH domain superfamily VEA_002261 92035d3753335b20419af0455ff39dbc 401 TIGRFAM TIGR01933 hflK: HflK protein 91 351 6.3E-121 T 13-10-2018 IPR010201 HflK GO:0016021 VEA_002261 92035d3753335b20419af0455ff39dbc 401 Pfam PF12221 Bacterial membrane protein N terminal 1 58 4.9E-14 T 13-10-2018 IPR020980 Menbrane protein HflK, N-terminal VEA_002261 92035d3753335b20419af0455ff39dbc 401 PRINTS PR00721 Stomatin signature 143 164 2.2E-6 T 13-10-2018 IPR001972 Stomatin family GO:0016020 VEA_002261 92035d3753335b20419af0455ff39dbc 401 PRINTS PR00721 Stomatin signature 96 118 2.2E-6 T 13-10-2018 IPR001972 Stomatin family GO:0016020 VEA_002261 92035d3753335b20419af0455ff39dbc 401 PRINTS PR00721 Stomatin signature 199 222 2.2E-6 T 13-10-2018 IPR001972 Stomatin family GO:0016020 VEA_002261 92035d3753335b20419af0455ff39dbc 401 Gene3D G3DSA:3.30.479.30 119 251 1.4E-21 T 13-10-2018 VEA_000052 7362798d6c37511545735e1400e57f4f 102 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 10 100 2.9E-13 T 13-10-2018 IPR008407 Branched-chain amino acid transport, AzlD VEA_001049 47dadea442dd35970e9a56cecc4f473c 836 Pfam PF02687 FtsX-like permease family 735 825 5.0E-10 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VEA_000917 a39ccfe98d436967dd68eceb91bcf26e 207 Pfam PF01081 KDPG and KHG aldolase 6 197 2.2E-70 T 13-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VEA_000917 a39ccfe98d436967dd68eceb91bcf26e 207 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 6 204 2.0E-81 T 13-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VEA_000917 a39ccfe98d436967dd68eceb91bcf26e 207 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 13-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VEA_000917 a39ccfe98d436967dd68eceb91bcf26e 207 SUPERFAMILY SSF51569 3 205 5.31E-65 T 13-10-2018 VEA_000917 a39ccfe98d436967dd68eceb91bcf26e 207 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 13-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VEA_000917 a39ccfe98d436967dd68eceb91bcf26e 207 Gene3D G3DSA:3.20.20.70 1 207 5.8E-75 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_003122 9b62808bebc6bc074e94b2d4bc0f0b49 218 SUPERFAMILY SSF142695 39 192 1.22E-55 T 13-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VEA_003122 9b62808bebc6bc074e94b2d4bc0f0b49 218 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 23 218 38.539 T 13-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VEA_003122 9b62808bebc6bc074e94b2d4bc0f0b49 218 Pfam PF00925 GTP cyclohydrolase II 39 191 5.0E-60 T 13-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VEA_003122 9b62808bebc6bc074e94b2d4bc0f0b49 218 Gene3D G3DSA:3.40.50.10990 24 194 1.1E-64 T 13-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VEA_001947 b2bb791c2e564ac68987868051ab2771 292 Pfam PF00892 EamA-like transporter family 138 275 4.8E-7 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEA_001947 b2bb791c2e564ac68987868051ab2771 292 SUPERFAMILY SSF103481 184 276 4.71E-6 T 13-10-2018 VEA_001947 b2bb791c2e564ac68987868051ab2771 292 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 274 4.0E-69 T 13-10-2018 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 VEA_001947 b2bb791c2e564ac68987868051ab2771 292 SUPERFAMILY SSF103481 35 131 1.01E-5 T 13-10-2018 VEA_001220 17a567d40a3cfc3e22292349ea42029c 239 Pfam PF00194 Eukaryotic-type carbonic anhydrase 22 236 5.5E-53 T 13-10-2018 IPR001148 Alpha carbonic anhydrase domain VEA_001220 17a567d40a3cfc3e22292349ea42029c 239 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 109 125 - T 13-10-2018 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117|Reactome: R-HSA-1475029 VEA_001220 17a567d40a3cfc3e22292349ea42029c 239 SMART SM01057 23 239 1.1E-94 T 13-10-2018 IPR001148 Alpha carbonic anhydrase domain VEA_001220 17a567d40a3cfc3e22292349ea42029c 239 SUPERFAMILY SSF51069 22 236 5.23E-75 T 13-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily VEA_001220 17a567d40a3cfc3e22292349ea42029c 239 Gene3D G3DSA:3.10.200.10 22 237 3.8E-84 T 13-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily VEA_000565 645d01de8f17ce35ffdb1d66eb2747c1 448 SUPERFAMILY SSF161093 276 446 2.09E-47 T 13-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 VEA_000565 645d01de8f17ce35ffdb1d66eb2747c1 448 Pfam PF01769 Divalent cation transporter 319 440 6.3E-24 T 13-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VEA_000565 645d01de8f17ce35ffdb1d66eb2747c1 448 SUPERFAMILY SSF158791 32 134 4.71E-14 T 13-10-2018 VEA_000565 645d01de8f17ce35ffdb1d66eb2747c1 448 SUPERFAMILY SSF54631 139 272 1.71E-13 T 13-10-2018 VEA_000565 645d01de8f17ce35ffdb1d66eb2747c1 448 SMART SM00924 34 137 3.6E-12 T 13-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain VEA_000565 645d01de8f17ce35ffdb1d66eb2747c1 448 Gene3D G3DSA:1.10.357.20 274 447 2.2E-47 T 13-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain VEA_000565 645d01de8f17ce35ffdb1d66eb2747c1 448 Gene3D G3DSA:3.10.580.10 133 258 6.6E-34 T 13-10-2018 VEA_000565 645d01de8f17ce35ffdb1d66eb2747c1 448 Pfam PF03448 MgtE intracellular N domain 35 135 3.1E-14 T 13-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain VEA_003437 90182c8dda9e78e0d3c6d2f275baacfa 180 Hamap MF_00906 Cell division protein ZapC [zapC]. 1 177 36.375 T 13-10-2018 IPR009809 Cell division protein ZapC VEA_003437 90182c8dda9e78e0d3c6d2f275baacfa 180 PIRSF PIRSF010252 1 178 1.8E-72 T 13-10-2018 IPR009809 Cell division protein ZapC VEA_003437 90182c8dda9e78e0d3c6d2f275baacfa 180 Pfam PF07126 Cell-division protein ZapC 1 168 2.7E-66 T 13-10-2018 IPR009809 Cell division protein ZapC VEA_003446 2f3e942d52a1fa9333898a7f392fc0bd 103 Pfam PF12321 Protein of unknown function (DUF3634) 2 100 5.1E-42 T 13-10-2018 IPR022090 Protein of unknown function DUF3634 VEA_004139 11cbc6a1b8d6494bd659f25bc6994535 171 Pfam PF17323 Trans-membrane regulatory protein ToxS 21 169 4.5E-69 T 13-10-2018 IPR035288 Trans-membrane regulatory protein ToxS GO:0016021 VEA_004139 11cbc6a1b8d6494bd659f25bc6994535 171 ProDom PD016359 TRANSMEMBRANE TOXS REGULATORY MEMBRANE PERIPLASMIC 1 171 4.0E-92 T 13-10-2018 IPR035288 Trans-membrane regulatory protein ToxS GO:0016021 VEA_002573 dfdcf6a868e080b6a7af14b38d645e3b 381 Pfam PF00909 Ammonium Transporter Family 1 374 3.8E-97 T 13-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 VEA_002573 dfdcf6a868e080b6a7af14b38d645e3b 381 Gene3D G3DSA:1.10.3430.10 1 380 1.1E-112 T 13-10-2018 IPR029020 Ammonium/urea transporter VEA_002573 dfdcf6a868e080b6a7af14b38d645e3b 381 SUPERFAMILY SSF111352 1 355 3.92E-100 T 13-10-2018 VEA_002573 dfdcf6a868e080b6a7af14b38d645e3b 381 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 1 377 2.1E-196 T 13-10-2018 IPR019879 Ammonium transporter, marine subtype VEA_002573 dfdcf6a868e080b6a7af14b38d645e3b 381 ProSitePatterns PS01219 Ammonium transporters signature. 135 160 - T 13-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 VEA_001719 a7cce014599a851da5a362b0f6ba5fe0 129 SUPERFAMILY SSF53137 14 129 6.54E-48 T 13-10-2018 VEA_001719 a7cce014599a851da5a362b0f6ba5fe0 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 32.665 T 13-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VEA_001719 a7cce014599a851da5a362b0f6ba5fe0 129 Pfam PF00411 Ribosomal protein S11 19 128 1.5E-52 T 13-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VEA_001719 a7cce014599a851da5a362b0f6ba5fe0 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 4.2E-55 T 13-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VEA_001719 a7cce014599a851da5a362b0f6ba5fe0 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 13-10-2018 IPR018102 Ribosomal S11, conserved site VEA_001719 a7cce014599a851da5a362b0f6ba5fe0 129 PIRSF PIRSF002131 1 129 2.1E-52 T 13-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VEA_001719 a7cce014599a851da5a362b0f6ba5fe0 129 Gene3D G3DSA:3.30.420.80 1 129 3.3E-57 T 13-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 VEA_004125 387a286405ff4be6cf34fb35d8a1f9c3 167 Pfam PF14539 Domain of unknown function (DUF4442) 15 151 1.4E-24 T 13-10-2018 IPR027961 Protein of unknown function DUF4442 VEA_004125 387a286405ff4be6cf34fb35d8a1f9c3 167 Gene3D G3DSA:3.10.129.10 15 157 2.3E-27 T 13-10-2018 VEA_004125 387a286405ff4be6cf34fb35d8a1f9c3 167 SUPERFAMILY SSF54637 10 156 3.32E-23 T 13-10-2018 IPR029069 HotDog domain superfamily VEA_004123 28b83ff8a6e0169f3cfc5dba2c002799 73 Pfam PF10981 Protein of unknown function (DUF2788) 18 67 4.5E-19 T 13-10-2018 IPR021249 Protein of unknown function DUF2788 VEA_002365 a46b4adf9dba867e6ea72e0b463770c4 481 PIRSF PIRSF028153 1 481 6.7E-226 T 13-10-2018 IPR016871 MSHA biogenesis protein, MshI VEA_002365 a46b4adf9dba867e6ea72e0b463770c4 481 SUPERFAMILY SSF53067 44 154 2.2E-11 T 13-10-2018 VEA_004088 359a53bb1b728203ebe39f8e1af67083 87 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 87 18.895 T 13-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 VEA_004088 359a53bb1b728203ebe39f8e1af67083 87 Pfam PF03776 Septum formation topological specificity factor MinE 14 83 9.9E-24 T 13-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 VEA_004088 359a53bb1b728203ebe39f8e1af67083 87 Gene3D G3DSA:3.30.1070.10 1 84 2.4E-26 T 13-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 VEA_004088 359a53bb1b728203ebe39f8e1af67083 87 SUPERFAMILY SSF55229 33 85 7.59E-17 T 13-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 VEA_004088 359a53bb1b728203ebe39f8e1af67083 87 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 84 4.5E-34 T 13-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 VEA_003339 c71cdba31e6f57f714928cb567db6fc0 67 Gene3D G3DSA:1.20.5.420 1 66 5.9E-8 T 13-10-2018 VEA_003339 c71cdba31e6f57f714928cb567db6fc0 67 TIGRFAM TIGR02501 type_III_yscE: type III secretion system protein, YseE family 1 63 1.5E-11 T 13-10-2018 IPR012671 Type III secretion system, secretion protein E GO:0009405 VEA_003339 c71cdba31e6f57f714928cb567db6fc0 67 Pfam PF08988 Type III secretion system, cytoplasmic E component of needle 1 62 3.5E-12 T 13-10-2018 IPR012671 Type III secretion system, secretion protein E GO:0009405 VEA_001234 36d31461ec47e2d0e337fc1ae8c4b887 91 SUPERFAMILY SSF55729 1 90 2.66E-24 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_001234 36d31461ec47e2d0e337fc1ae8c4b887 91 Pfam PF14542 GCN5-related N-acetyl-transferase 14 88 1.3E-20 T 13-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase VEA_001234 36d31461ec47e2d0e337fc1ae8c4b887 91 Gene3D G3DSA:3.40.630.30 1 91 3.4E-22 T 13-10-2018 VEA_000020 5e0f52c64dc66b152f909cd197a64a7e 176 PIRSF PIRSF028301 1 174 1.6E-66 T 13-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 VEA_000020 5e0f52c64dc66b152f909cd197a64a7e 176 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 6 161 9.2E-61 T 13-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 VEA_000020 5e0f52c64dc66b152f909cd197a64a7e 176 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 9 161 6.1E-62 T 13-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 VEA_003797 8a729bb7e4e76499e537ef0e0fa575cb 159 Pfam PF05433 Glycine zipper 2TM domain 65 105 2.3E-7 T 13-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 VEA_002627 72eb0970b33085a269528e245c047914 257 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VEA_002627 72eb0970b33085a269528e245c047914 257 Gene3D G3DSA:3.20.20.140 1 255 1.6E-81 T 13-10-2018 VEA_002627 72eb0970b33085a269528e245c047914 257 SUPERFAMILY SSF51556 1 253 5.11E-76 T 13-10-2018 IPR032466 Metal-dependent hydrolase VEA_002627 72eb0970b33085a269528e245c047914 257 PIRSF PIRSF005902 1 256 5.6E-66 T 13-10-2018 IPR001130 TatD family GO:0016788 VEA_002627 72eb0970b33085a269528e245c047914 257 Pfam PF01026 TatD related DNase 4 253 2.6E-63 T 13-10-2018 IPR001130 TatD family GO:0016788 VEA_002627 72eb0970b33085a269528e245c047914 257 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VEA_000188 02a09d6a6a1b0f39eb6a70750d59b402 339 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 20 325 8.8E-106 T 13-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 VEA_000188 02a09d6a6a1b0f39eb6a70750d59b402 339 Pfam PF03741 Integral membrane protein TerC family 92 293 1.2E-53 T 13-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 VEA_002851 48f210e157ecc8cf5bb9a2e1a191d53b 442 SUPERFAMILY SSF56935 26 442 7.94E-104 T 13-10-2018 VEA_002851 48f210e157ecc8cf5bb9a2e1a191d53b 442 Gene3D G3DSA:2.40.160.60 26 442 2.1E-126 T 13-10-2018 VEA_002851 48f210e157ecc8cf5bb9a2e1a191d53b 442 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 19 442 1.9E-133 T 13-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VEA_002248 19a79a854f71282d3279c3dbd6311811 295 SUPERFAMILY SSF103481 206 293 1.7E-10 T 13-10-2018 VEA_002248 19a79a854f71282d3279c3dbd6311811 295 Pfam PF00892 EamA-like transporter family 157 294 2.0E-16 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEA_002248 19a79a854f71282d3279c3dbd6311811 295 Pfam PF00892 EamA-like transporter family 4 135 6.4E-16 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEA_002248 19a79a854f71282d3279c3dbd6311811 295 SUPERFAMILY SSF103481 36 140 6.41E-12 T 13-10-2018 VEA_002221 a097f7c82037efd58461949a9f7c0548 302 Pfam PF01545 Cation efflux family 15 206 1.8E-42 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VEA_002221 a097f7c82037efd58461949a9f7c0548 302 Gene3D G3DSA:1.20.1510.10 8 206 4.9E-59 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VEA_002221 a097f7c82037efd58461949a9f7c0548 302 Gene3D G3DSA:3.30.70.1350 207 290 2.5E-30 T 13-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 VEA_002221 a097f7c82037efd58461949a9f7c0548 302 SUPERFAMILY SSF160240 210 287 7.85E-24 T 13-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 VEA_002221 a097f7c82037efd58461949a9f7c0548 302 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 286 9.6E-25 T 13-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain VEA_002221 a097f7c82037efd58461949a9f7c0548 302 SUPERFAMILY SSF161111 8 207 5.23E-50 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VEA_002221 a097f7c82037efd58461949a9f7c0548 302 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 11 286 6.9E-68 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VEA_004164 d689d9d33356a37ee7345075b930175a 646 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 600 645 8.8E-10 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VEA_004164 d689d9d33356a37ee7345075b930175a 646 SUPERFAMILY SSF64518 175 645 6.93E-23 T 13-10-2018 VEA_004164 d689d9d33356a37ee7345075b930175a 646 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 328 2.4E-60 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VEA_004164 d689d9d33356a37ee7345075b930175a 646 PRINTS PR01005 Flagellar hook-associated protein signature 360 382 3.0E-8 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VEA_004164 d689d9d33356a37ee7345075b930175a 646 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 3.0E-8 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VEA_004164 d689d9d33356a37ee7345075b930175a 646 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 3.0E-8 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VEA_004164 d689d9d33356a37ee7345075b930175a 646 PRINTS PR01005 Flagellar hook-associated protein signature 158 182 3.0E-8 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VEA_001173 efff607746ae3313014a78850738aac0 440 Pfam PF01973 Protein of unknown function DUF115 211 359 9.9E-26 T 13-10-2018 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like VEA_001686 504e6b5d61ae6fe79558ac6204b27f5f 330 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 21 324 2.5E-142 T 13-10-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030975 VEA_001686 504e6b5d61ae6fe79558ac6204b27f5f 330 Gene3D G3DSA:3.40.190.10 26 300 2.7E-117 T 13-10-2018 VEA_001686 504e6b5d61ae6fe79558ac6204b27f5f 330 Pfam PF13343 Bacterial extracellular solute-binding protein 76 294 2.5E-22 T 13-10-2018 VEA_001686 504e6b5d61ae6fe79558ac6204b27f5f 330 SUPERFAMILY SSF53850 25 325 7.72E-68 T 13-10-2018 VEA_001686 504e6b5d61ae6fe79558ac6204b27f5f 330 Gene3D G3DSA:3.40.190.10 126 325 2.7E-117 T 13-10-2018 VEA_001686 504e6b5d61ae6fe79558ac6204b27f5f 330 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 13 329 1.2E-144 T 13-10-2018 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria GO:0015888|GO:0030288|GO:0030975 VEA_001810 3a4d073bf78f7b6e0498645b6ebc7dff 135 Gene3D G3DSA:1.10.3830.10 15 133 3.3E-38 T 13-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VEA_001810 3a4d073bf78f7b6e0498645b6ebc7dff 135 Pfam PF01219 Prokaryotic diacylglycerol kinase 28 129 3.4E-33 T 13-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VEA_001810 3a4d073bf78f7b6e0498645b6ebc7dff 135 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 82 93 - T 13-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VEA_002509 4c1e5be21747879d1f2cd2e4743c31c1 93 Gene3D G3DSA:1.20.5.400 21 63 4.9E-13 T 13-10-2018 VEA_002509 4c1e5be21747879d1f2cd2e4743c31c1 93 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 36.254 T 13-10-2018 IPR023081 Cell division protein FtsB VEA_002509 4c1e5be21747879d1f2cd2e4743c31c1 93 Pfam PF04977 Septum formation initiator 11 89 7.1E-29 T 13-10-2018 IPR007060 Septum formation initiator FtsL/DivIC VEA_002127 1f8683f7df0c162a54a621616386de21 164 Gene3D G3DSA:3.90.190.10 6 164 1.5E-31 T 13-10-2018 IPR029021 Protein-tyrosine phosphatase-like VEA_002127 1f8683f7df0c162a54a621616386de21 164 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 109 119 - T 13-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 VEA_002127 1f8683f7df0c162a54a621616386de21 164 SUPERFAMILY SSF52799 13 161 2.31E-31 T 13-10-2018 IPR029021 Protein-tyrosine phosphatase-like VEA_002127 1f8683f7df0c162a54a621616386de21 164 Pfam PF00782 Dual specificity phosphatase, catalytic domain 29 146 1.4E-8 T 13-10-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 VEA_001030 2c25dbea628bc7ea706fe286fbda6989 148 Pfam PF07883 Cupin domain 56 116 1.0E-6 T 13-10-2018 IPR013096 Cupin 2, conserved barrel VEA_001030 2c25dbea628bc7ea706fe286fbda6989 148 SUPERFAMILY SSF51182 26 145 2.96E-28 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily VEA_001030 2c25dbea628bc7ea706fe286fbda6989 148 Gene3D G3DSA:2.60.120.10 17 147 3.7E-45 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VEA_003172 5f751fae79a6a078f6caebae1a4505ea 72 SUPERFAMILY SSF55729 7 68 7.02E-10 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_003172 5f751fae79a6a078f6caebae1a4505ea 72 Gene3D G3DSA:3.40.630.30 5 71 3.3E-10 T 13-10-2018 VEA_003611 824509b43302dbae6f0a5ff76e0492af 312 SUPERFAMILY SSF53850 5 309 1.14E-89 T 13-10-2018 VEA_003611 824509b43302dbae6f0a5ff76e0492af 312 Gene3D G3DSA:3.40.190.100 94 235 8.8E-140 T 13-10-2018 VEA_003611 824509b43302dbae6f0a5ff76e0492af 312 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 11 294 6.3E-51 T 13-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 VEA_003611 824509b43302dbae6f0a5ff76e0492af 312 Gene3D G3DSA:3.40.190.10 6 307 8.8E-140 T 13-10-2018 VEA_001670 0b2191e53714622860aab3720e70466e 266 Pfam PF06738 Putative threonine/serine exporter 21 258 2.6E-67 T 13-10-2018 IPR010619 Putative threonine/serine exporter VEA_000728 48903f88cc2073377db37f43f08101cb 884 PIRSF PIRSF035905 1 884 4.2E-239 T 13-10-2018 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein VEA_000728 48903f88cc2073377db37f43f08101cb 884 Pfam PF10101 Predicted membrane protein (DUF2339) 123 873 3.0E-101 T 13-10-2018 IPR019286 Protein of unknown function DUF2339, transmembrane VEA_003237 788a2df7adce9f80e26d329c1f64c980 664 Pfam PF03235 Protein of unknown function DUF262 15 230 6.4E-33 T 13-10-2018 IPR004919 Domain of unknown function DUF262 VEA_003237 788a2df7adce9f80e26d329c1f64c980 664 ProDom PD062361 VC1766 YFJM PM0595 588 661 5.0E-33 T 13-10-2018 VEA_003237 788a2df7adce9f80e26d329c1f64c980 664 Pfam PF07510 Protein of unknown function (DUF1524) 514 656 1.3E-19 T 13-10-2018 IPR011089 Domain of unknown function DUF1524 VEA_003123 dbbdc3dc9b1a19ba34249985575c783a 420 Pfam PF09375 Imelysin 40 398 4.6E-97 T 13-10-2018 IPR018976 Imelysin-like domain VEA_003123 dbbdc3dc9b1a19ba34249985575c783a 420 Gene3D G3DSA:1.20.1420.20 16 401 4.7E-85 T 13-10-2018 IPR038352 Imelysin-like domain superfamily VEA_001918 74a06a29d01921cfccd102fd6cfffa3b 144 Pfam PF00583 Acetyltransferase (GNAT) family 32 117 9.6E-9 T 13-10-2018 IPR000182 GNAT domain VEA_001918 74a06a29d01921cfccd102fd6cfffa3b 144 SUPERFAMILY SSF55729 1 128 7.03E-21 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_001918 74a06a29d01921cfccd102fd6cfffa3b 144 Gene3D G3DSA:3.40.630.30 2 143 8.8E-18 T 13-10-2018 VEA_002388 48fda8a1c9c4f5a51350a12afcf22ccd 1301 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 7 1289 0.0 T 13-10-2018 IPR011836 Conserved hypothetical protein CHP02099 VEA_002388 48fda8a1c9c4f5a51350a12afcf22ccd 1301 Pfam PF13502 AsmA-like C-terminal region 1039 1279 5.8E-57 T 13-10-2018 IPR032712 AsmA-like, C-terminal VEA_002388 48fda8a1c9c4f5a51350a12afcf22ccd 1301 Pfam PF13116 Protein of unknown function 506 800 7.4E-90 T 13-10-2018 IPR025263 Domain of unknown function DUF3971 VEA_000340 56e6f6bdf1851db0b96a014af1f63193 327 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 319 2.7E-54 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VEA_001538 ddaf3be6edea565684674f78d3095db7 1015 SUPERFAMILY SSF56176 34 278 7.27E-49 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VEA_001538 ddaf3be6edea565684674f78d3095db7 1015 Pfam PF02913 FAD linked oxidases, C-terminal domain 278 535 4.5E-60 T 13-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 VEA_001538 ddaf3be6edea565684674f78d3095db7 1015 Gene3D G3DSA:3.30.465.40 19 205 2.4E-42 T 13-10-2018 VEA_001538 ddaf3be6edea565684674f78d3095db7 1015 SUPERFAMILY SSF55103 254 539 1.54E-52 T 13-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 VEA_001538 ddaf3be6edea565684674f78d3095db7 1015 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 668 679 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VEA_001538 ddaf3be6edea565684674f78d3095db7 1015 Pfam PF01565 FAD binding domain 52 192 3.2E-33 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 VEA_001538 ddaf3be6edea565684674f78d3095db7 1015 SUPERFAMILY SSF46548 515 686 5.49E-8 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VEA_001538 ddaf3be6edea565684674f78d3095db7 1015 Pfam PF13183 4Fe-4S dicluster domain 572 682 8.1E-12 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VEA_002653 34bde5e10f876db3fe33f759bdb07b93 371 Pfam PF14378 PAP2 superfamily 148 354 1.1E-30 T 13-10-2018 IPR026841 Inositolphosphotransferase Aur1/Ipt1 VEA_003551 5da267ca7be41cf1f5ee4f11d7de7d27 445 Pfam PF06629 MltA-interacting protein MipA 52 248 7.0E-23 T 13-10-2018 IPR010583 MltA-interacting MipA VEA_002411 6ac2e40ad57b10a6a11d7c9e1a9e6ab3 162 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 4 152 1.3E-54 T 13-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 VEA_002411 6ac2e40ad57b10a6a11d7c9e1a9e6ab3 162 Pfam PF02470 MlaD protein 39 118 2.9E-20 T 13-10-2018 IPR003399 Mce/MlaD VEA_002949 f2ec17442c762b2f51622e73c67ca2b6 192 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 26.24 T 13-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 VEA_002949 f2ec17442c762b2f51622e73c67ca2b6 192 PIRSF PIRSF006102 1 192 7.4E-65 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VEA_002949 f2ec17442c762b2f51622e73c67ca2b6 192 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 1.5E-61 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VEA_002949 f2ec17442c762b2f51622e73c67ca2b6 192 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 1.7E-89 T 13-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 VEA_003573 685238ab5bde927821f9be2d93b2700e 380 PRINTS PR00166 Aromatic amino acid permease signature 292 310 7.9E-65 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VEA_003573 685238ab5bde927821f9be2d93b2700e 380 PRINTS PR00166 Aromatic amino acid permease signature 128 148 7.9E-65 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VEA_003573 685238ab5bde927821f9be2d93b2700e 380 PRINTS PR00166 Aromatic amino acid permease signature 258 277 7.9E-65 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VEA_003573 685238ab5bde927821f9be2d93b2700e 380 PRINTS PR00166 Aromatic amino acid permease signature 17 36 7.9E-65 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VEA_003573 685238ab5bde927821f9be2d93b2700e 380 PRINTS PR00166 Aromatic amino acid permease signature 62 82 7.9E-65 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VEA_003573 685238ab5bde927821f9be2d93b2700e 380 PRINTS PR00166 Aromatic amino acid permease signature 162 184 7.9E-65 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VEA_003573 685238ab5bde927821f9be2d93b2700e 380 PRINTS PR00166 Aromatic amino acid permease signature 201 220 7.9E-65 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VEA_003573 685238ab5bde927821f9be2d93b2700e 380 PRINTS PR00166 Aromatic amino acid permease signature 313 332 7.9E-65 T 13-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VEA_003573 685238ab5bde927821f9be2d93b2700e 380 Pfam PF03222 Tryptophan/tyrosine permease family 1 364 5.0E-102 T 13-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 VEA_003573 685238ab5bde927821f9be2d93b2700e 380 Gene3D G3DSA:1.20.1740.10 3 378 5.6E-8 T 13-10-2018 VEA_002366 9c8da1913ea6b6253ef07afe26587162 216 Pfam PF04612 Type II secretion system (T2SS), protein M 8 94 1.5E-8 T 13-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 VEA_002831 9b144bcb8d48ba0e98b62b54010681a1 295 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 22 261 1.4E-22 T 13-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 VEA_002831 9b144bcb8d48ba0e98b62b54010681a1 295 Gene3D G3DSA:3.40.50.300 22 263 2.9E-59 T 13-10-2018 VEA_002831 9b144bcb8d48ba0e98b62b54010681a1 295 PIRSF PIRSF003092 6 287 7.9E-86 T 13-10-2018 IPR025501 ATP binding protein MinD VEA_002831 9b144bcb8d48ba0e98b62b54010681a1 295 SUPERFAMILY SSF52540 22 283 1.15E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000251 cca74482d940f04d9f26107c9252ed58 109 Pfam PF07119 Protein of unknown function (DUF1375) 15 85 1.6E-14 T 13-10-2018 IPR010780 Protein of unknown function DUF1375 VEA_003631 54ff058b8cddb49cc3b0472f1c20d011 118 Gene3D G3DSA:1.10.3730.20 8 117 7.6E-34 T 13-10-2018 VEA_003631 54ff058b8cddb49cc3b0472f1c20d011 118 SUPERFAMILY SSF103481 14 112 7.98E-19 T 13-10-2018 VEA_003631 54ff058b8cddb49cc3b0472f1c20d011 118 Pfam PF00893 Small Multidrug Resistance protein 12 101 6.0E-24 T 13-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 VEA_003741 7282e3d6484ba056dee3d249808137c2 274 Pfam PF10977 Protein of unknown function (DUF2797) 38 269 2.3E-95 T 13-10-2018 IPR021246 Protein of unknown function DUF2797 VEA_004400 c7ac734d5a6a8ded56e66499a18624a4 102 Gene3D G3DSA:1.10.1270.10 1 98 7.3E-32 T 13-10-2018 IPR038116 TrpR-like superfamily VEA_004400 c7ac734d5a6a8ded56e66499a18624a4 102 SUPERFAMILY SSF48295 2 94 4.08E-28 T 13-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 VEA_004400 c7ac734d5a6a8ded56e66499a18624a4 102 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 4 78 3.0E-31 T 13-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 VEA_004400 c7ac734d5a6a8ded56e66499a18624a4 102 Hamap MF_00475 Trp operon repressor [trpR]. 6 99 23.009 T 13-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 VEA_004400 c7ac734d5a6a8ded56e66499a18624a4 102 TIGRFAM TIGR01321 TrpR: trp operon repressor 6 91 2.8E-25 T 13-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 VEA_004400 c7ac734d5a6a8ded56e66499a18624a4 102 Pfam PF01371 Trp repressor protein 8 92 4.1E-31 T 13-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 VEA_004400 c7ac734d5a6a8ded56e66499a18624a4 102 PIRSF PIRSF003196 1 99 3.8E-38 T 13-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 VEA_002873 93f4b116c6f34e811bfe932647bb4dd6 1454 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 72 144 2.1E-25 T 13-10-2018 IPR020012 Motility protein FimV, N-terminal VEA_002873 93f4b116c6f34e811bfe932647bb4dd6 1454 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 1409 1450 1.4E-13 T 13-10-2018 IPR020011 Motility protein FimV, C-terminal VEA_002873 93f4b116c6f34e811bfe932647bb4dd6 1454 Gene3D G3DSA:1.20.58.2200 1394 1451 1.4E-12 T 13-10-2018 IPR038440 FimV, C-terminal domain superfamily VEA_000935 da261c83fb269a95e787fa41725ea3a9 295 SUPERFAMILY SSF53850 88 294 6.88E-46 T 13-10-2018 VEA_000935 da261c83fb269a95e787fa41725ea3a9 295 Gene3D G3DSA:3.40.190.290 90 289 2.3E-63 T 13-10-2018 VEA_000935 da261c83fb269a95e787fa41725ea3a9 295 SUPERFAMILY SSF46785 6 110 7.42E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000935 da261c83fb269a95e787fa41725ea3a9 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 1.1E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_000935 da261c83fb269a95e787fa41725ea3a9 295 Gene3D G3DSA:1.10.10.10 3 87 4.7E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000935 da261c83fb269a95e787fa41725ea3a9 295 Pfam PF03466 LysR substrate binding domain 87 289 1.3E-41 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_000350 a589470e7ba1f9bca2d2f2d60d3a2b3a 336 Pfam PF10974 Protein of unknown function (DUF2804) 42 335 2.6E-81 T 13-10-2018 IPR021243 Protein of unknown function DUF2804 VEA_002133 3460088b9cbe1929379cdc1bbee47226 206 Pfam PF07947 YhhN family 26 204 2.6E-32 T 13-10-2018 IPR012506 YhhN-like GO:0016021 VEA_001405 f4b3e7848f1214d076ec21266c3eed82 344 Gene3D G3DSA:2.130.10.10 1 339 4.8E-88 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VEA_001405 f4b3e7848f1214d076ec21266c3eed82 344 SUPERFAMILY SSF51004 30 325 1.02E-29 T 13-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily VEA_001405 f4b3e7848f1214d076ec21266c3eed82 344 Pfam PF10282 Lactonase, 7-bladed beta-propeller 9 338 5.8E-93 T 13-10-2018 IPR019405 Lactonase, 7-bladed beta propeller VEA_001924 e47adda401d9feac6bb074bf78efaeaa 81 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 80 25.127 T 13-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 VEA_001924 e47adda401d9feac6bb074bf78efaeaa 81 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 47 5.2E-21 T 13-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 VEA_001924 e47adda401d9feac6bb074bf78efaeaa 81 Pfam PF02416 mttA/Hcf106 family 4 55 3.6E-13 T 13-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 VEA_004325 92fce8b132cebc085ff3b4155f2f7c20 305 SUPERFAMILY SSF46785 9 111 1.18E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_004325 92fce8b132cebc085ff3b4155f2f7c20 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 64 4.6E-18 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_004325 92fce8b132cebc085ff3b4155f2f7c20 305 SUPERFAMILY SSF53850 92 303 7.6E-23 T 13-10-2018 VEA_004325 92fce8b132cebc085ff3b4155f2f7c20 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 3.8E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_004325 92fce8b132cebc085ff3b4155f2f7c20 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 3.8E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_004325 92fce8b132cebc085ff3b4155f2f7c20 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 3.8E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VEA_004325 92fce8b132cebc085ff3b4155f2f7c20 305 Gene3D G3DSA:3.40.190.10 101 298 2.3E-45 T 13-10-2018 VEA_004325 92fce8b132cebc085ff3b4155f2f7c20 305 Gene3D G3DSA:3.40.190.10 161 275 2.3E-45 T 13-10-2018 VEA_004325 92fce8b132cebc085ff3b4155f2f7c20 305 Gene3D G3DSA:1.10.10.10 6 95 2.9E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_004325 92fce8b132cebc085ff3b4155f2f7c20 305 Pfam PF03466 LysR substrate binding domain 91 298 2.4E-22 T 13-10-2018 IPR005119 LysR, substrate-binding VEA_001680 8d7697370fdcd439e0c0781a44425759 859 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 32 730 4.6E-214 T 13-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ VEA_001680 8d7697370fdcd439e0c0781a44425759 859 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 135 667 9.8E-76 T 13-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VEA_001680 8d7697370fdcd439e0c0781a44425759 859 Pfam PF11874 Domain of unknown function (DUF3394) 674 853 1.5E-69 T 13-10-2018 IPR021814 Protein of unknown function DUF3394 VEA_004091 ccd15a7e029ff4d3d391df4730273fe6 284 SUPERFAMILY SSF53474 2 282 4.42E-45 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_004091 ccd15a7e029ff4d3d391df4730273fe6 284 Pfam PF00561 alpha/beta hydrolase fold 27 147 1.7E-18 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEA_004091 ccd15a7e029ff4d3d391df4730273fe6 284 Gene3D G3DSA:3.40.50.1820 1 277 7.1E-50 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_000873 7fea67ddb634ae3e0aee5c07335a16fc 171 Gene3D G3DSA:3.40.630.30 2 157 3.2E-34 T 13-10-2018 VEA_000873 7fea67ddb634ae3e0aee5c07335a16fc 171 Pfam PF13302 Acetyltransferase (GNAT) domain 9 146 1.1E-23 T 13-10-2018 IPR000182 GNAT domain VEA_000873 7fea67ddb634ae3e0aee5c07335a16fc 171 SUPERFAMILY SSF55729 3 169 3.24E-35 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_001044 4317daa8128e0fe94b763ed4a3504d6b 185 SUPERFAMILY SSF52833 2 184 1.89E-56 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VEA_001044 4317daa8128e0fe94b763ed4a3504d6b 185 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 154 177 1.3E-6 T 13-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VEA_001044 4317daa8128e0fe94b763ed4a3504d6b 185 Gene3D G3DSA:3.40.30.10 1 184 4.3E-63 T 13-10-2018 VEA_001044 4317daa8128e0fe94b763ed4a3504d6b 185 Pfam PF00578 AhpC/TSA family 5 131 2.9E-35 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VEA_001044 4317daa8128e0fe94b763ed4a3504d6b 185 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 185 6.8E-104 T 13-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 VEA_001044 4317daa8128e0fe94b763ed4a3504d6b 185 PIRSF PIRSF000239 1 185 2.1E-53 T 13-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VEA_000279 e92e1a65c33240a719751cb51b21a23f 240 Pfam PF01925 Sulfite exporter TauE/SafE 11 230 1.1E-24 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VEA_002722 be90d969f2e1d72879e7e56b260f646e 63 Pfam PF14056 Domain of unknown function (DUF4250) 9 62 1.8E-20 T 13-10-2018 IPR025346 Protein of unknown function DUF4250 VEA_000936 4531ae85d2fa5694212aadad86b4b3ec 288 SUPERFAMILY SSF56281 7 263 2.8E-39 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEA_000936 4531ae85d2fa5694212aadad86b4b3ec 288 Gene3D G3DSA:3.60.15.10 23 259 3.7E-27 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VEA_000936 4531ae85d2fa5694212aadad86b4b3ec 288 SMART SM00849 38 223 6.6E-20 T 13-10-2018 IPR001279 Metallo-beta-lactamase VEA_000936 4531ae85d2fa5694212aadad86b4b3ec 288 Pfam PF00753 Metallo-beta-lactamase superfamily 38 223 4.9E-13 T 13-10-2018 IPR001279 Metallo-beta-lactamase VEA_000359 ea83b6c0e0d8b95e66c2354c371248a0 134 SUPERFAMILY SSF46458 4 131 1.19E-27 T 13-10-2018 IPR009050 Globin-like superfamily VEA_000359 ea83b6c0e0d8b95e66c2354c371248a0 134 Gene3D G3DSA:1.10.490.10 1 131 2.9E-30 T 13-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 VEA_002073 3bfcf308e299121329a3b31d6ecac282 471 Gene3D G3DSA:3.20.20.70 220 451 5.8E-51 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_002073 3bfcf308e299121329a3b31d6ecac282 471 Pfam PF02581 Thiamine monophosphate synthase 236 429 6.5E-50 T 13-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VEA_002073 3bfcf308e299121329a3b31d6ecac282 471 SUPERFAMILY SSF51391 226 447 1.18E-57 T 13-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VEA_001210 899b615adaa887f8036583b2b778c40a 310 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 117 291 5.1E-17 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEA_001210 899b615adaa887f8036583b2b778c40a 310 Gene3D G3DSA:3.40.190.10 200 294 3.3E-10 T 13-10-2018 VEA_001210 899b615adaa887f8036583b2b778c40a 310 Gene3D G3DSA:3.40.190.10 18 172 1.8E-21 T 13-10-2018 VEA_001210 899b615adaa887f8036583b2b778c40a 310 SMART SM00062 38 294 1.4E-19 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEA_001210 899b615adaa887f8036583b2b778c40a 310 SUPERFAMILY SSF53850 10 292 1.38E-38 T 13-10-2018 VEA_000148 bc1f3a914cc1e4f9b39b4fffe0cb7795 382 Pfam PF02486 Replication initiation factor 183 360 1.8E-30 T 13-10-2018 IPR003491 Replication initiation factor GO:0003677|GO:0003916|GO:0006270 VEA_003597 8a68cb4c0673d62ef341273b42c208ae 345 SUPERFAMILY SSF48371 55 157 3.96E-6 T 13-10-2018 IPR016024 Armadillo-type fold VEA_003597 8a68cb4c0673d62ef341273b42c208ae 345 SUPERFAMILY SSF48452 162 274 1.38E-16 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_003597 8a68cb4c0673d62ef341273b42c208ae 345 Gene3D G3DSA:1.25.40.10 122 290 1.6E-16 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_000883 6b966a876bb1004d49fc1aef2cac0e9f 450 Pfam PF02447 GntP family permease 1 448 1.6E-98 T 13-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VEA_000428 2c57baa06fd27346a813c2e96c47025c 485 Pfam PF13665 Domain of unknown function (DUF4150) 22 127 2.0E-35 T 13-10-2018 IPR025425 Domain of unknown function DUF4150 VEA_002741 3d44804156cf6785c1e8cb81bd7902c7 104 Gene3D G3DSA:1.20.1440.40 1 104 2.8E-34 T 13-10-2018 IPR036814 YqcC-like superfamily VEA_002741 3d44804156cf6785c1e8cb81bd7902c7 104 SUPERFAMILY SSF158452 1 103 1.1E-37 T 13-10-2018 IPR036814 YqcC-like superfamily VEA_002741 3d44804156cf6785c1e8cb81bd7902c7 104 PIRSF PIRSF006257 1 104 2.1E-41 T 13-10-2018 IPR007384 Protein of unknown function UCP006257 VEA_002741 3d44804156cf6785c1e8cb81bd7902c7 104 Pfam PF04287 tRNA pseudouridine synthase C 7 102 6.5E-35 T 13-10-2018 IPR023376 YqcC-like domain VEA_000026 4fd0415a35ebbc422a8c8404d0e00bc9 321 Pfam PF06996 Type VI secretion, TssG 11 306 1.2E-65 T 13-10-2018 IPR010732 Type VI secretion, TssG-like VEA_000026 4fd0415a35ebbc422a8c8404d0e00bc9 321 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 11 306 1.1E-57 T 13-10-2018 IPR010732 Type VI secretion, TssG-like VEA_001941 c03b2e459cd7067247fa05a949b81f76 183 SMART SM00749 120 183 8.5E-5 T 13-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria VEA_001941 c03b2e459cd7067247fa05a949b81f76 183 SMART SM00749 37 100 36.0 T 13-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria VEA_001941 c03b2e459cd7067247fa05a949b81f76 183 Pfam PF04972 BON domain 33 99 2.4E-17 T 13-10-2018 IPR007055 BON domain VEA_001941 c03b2e459cd7067247fa05a949b81f76 183 Pfam PF04972 BON domain 115 182 6.7E-15 T 13-10-2018 IPR007055 BON domain VEA_000265 254dc7a0ecbe0bf0c5168b1f3fa2a616 150 Pfam PF09722 Protein of unknown function (DUF2384) 98 147 1.9E-15 T 13-10-2018 IPR024467 Domain of unknown function DUF2384 VEA_000265 254dc7a0ecbe0bf0c5168b1f3fa2a616 150 TIGRFAM TIGR02293 TAS_TIGR02293: putative toxin-antitoxin system antitoxin component, TIGR02293 family 23 150 1.1E-32 T 13-10-2018 IPR011979 Conserved hypothetical protein CHP02293 VEA_003341 2cceb136d07bd800922c189534e38a5d 119 TIGRFAM TIGR02508 type_III_yscG: type III secretion protein, YscG family 1 117 1.1E-46 T 13-10-2018 IPR013348 Type III secretion system YscG GO:0009405 VEA_003341 2cceb136d07bd800922c189534e38a5d 119 Gene3D G3DSA:1.25.40.10 1 117 1.2E-38 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_003341 2cceb136d07bd800922c189534e38a5d 119 Pfam PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) 1 117 5.0E-45 T 13-10-2018 IPR013348 Type III secretion system YscG GO:0009405 VEA_001020 49eba6644c9a3f85db4a941cecc80cbd 177 Gene3D G3DSA:3.40.630.30 1 175 2.0E-38 T 13-10-2018 VEA_001020 49eba6644c9a3f85db4a941cecc80cbd 177 Pfam PF13302 Acetyltransferase (GNAT) domain 5 149 1.7E-21 T 13-10-2018 IPR000182 GNAT domain VEA_001020 49eba6644c9a3f85db4a941cecc80cbd 177 SUPERFAMILY SSF55729 2 174 6.96E-38 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_001855 393a0d94feb06faa9aa970769c94a734 866 SUPERFAMILY SSF56935 28 866 9.77E-96 T 13-10-2018 VEA_001855 393a0d94feb06faa9aa970769c94a734 866 Pfam PF00593 TonB dependent receptor 354 864 1.1E-48 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VEA_001855 393a0d94feb06faa9aa970769c94a734 866 Gene3D G3DSA:2.170.130.10 33 173 2.1E-35 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VEA_001855 393a0d94feb06faa9aa970769c94a734 866 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 169 7.7E-25 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain VEA_002867 7876fbba3579cfd62ae98aa2894c877a 87 Pfam PF08891 YfcL protein 4 84 3.7E-33 T 13-10-2018 IPR014987 Uncharacterised protein family YfcL VEA_002745 c9e277294468ec4e21bcb255150716cc 292 SUPERFAMILY SSF55920 3 282 1.83E-81 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like VEA_002745 c9e277294468ec4e21bcb255150716cc 292 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 197 215 - T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 VEA_002745 c9e277294468ec4e21bcb255150716cc 292 Pfam PF00557 Metallopeptidase family M24 12 271 6.2E-46 T 13-10-2018 IPR000994 Peptidase M24 VEA_002745 c9e277294468ec4e21bcb255150716cc 292 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 279 5.1E-83 T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 VEA_002745 c9e277294468ec4e21bcb255150716cc 292 Gene3D G3DSA:3.90.230.10 1 290 5.1E-104 T 13-10-2018 VEA_002745 c9e277294468ec4e21bcb255150716cc 292 Hamap MF_01974 Methionine aminopeptidase [map]. 3 280 40.558 T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 VEA_000253 fbf565346bf8179dcfb6d1ca296a9eb3 481 SUPERFAMILY SSF48208 26 446 1.36E-54 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VEA_000253 fbf565346bf8179dcfb6d1ca296a9eb3 481 Gene3D G3DSA:1.50.10.10 29 425 2.8E-19 T 13-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 VEA_000856 65eed975ddb4c8bafb85136a84aad4ae 118 Gene3D G3DSA:3.30.1370.150 59 118 4.5E-29 T 13-10-2018 VEA_000856 65eed975ddb4c8bafb85136a84aad4ae 118 Pfam PF10928 Protein of unknown function (DUF2810) 65 116 2.2E-29 T 13-10-2018 IPR021230 Protein of unknown function DUF2810 VEA_002012 b8376575938f809c13128e25347b8256 245 SUPERFAMILY SSF52540 1 238 4.79E-76 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002012 b8376575938f809c13128e25347b8256 245 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_002012 b8376575938f809c13128e25347b8256 245 PIRSF PIRSF039085 1 244 4.6E-105 T 13-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VEA_002012 b8376575938f809c13128e25347b8256 245 SMART SM00382 26 216 9.4E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_002012 b8376575938f809c13128e25347b8256 245 Gene3D G3DSA:3.40.50.300 1 243 7.4E-77 T 13-10-2018 VEA_002012 b8376575938f809c13128e25347b8256 245 Pfam PF00005 ABC transporter 17 168 4.9E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_004528 beb7fd456171b4010f4b0cfcc87bdcea 195 Gene3D G3DSA:1.20.58.220 1 194 1.1E-54 T 13-10-2018 IPR038078 PhoU-like domain superfamily VEA_004528 beb7fd456171b4010f4b0cfcc87bdcea 195 SUPERFAMILY SSF109755 14 185 3.14E-15 T 13-10-2018 VEA_004528 beb7fd456171b4010f4b0cfcc87bdcea 195 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 2 194 3.0E-60 T 13-10-2018 IPR002727 Protein of unknown function DUF47 VEA_004528 beb7fd456171b4010f4b0cfcc87bdcea 195 Pfam PF01865 Protein of unknown function DUF47 2 192 1.8E-58 T 13-10-2018 IPR018445 Putative phosphate transport regulator VEA_002560 6e87070a4fd7512b6c6fc59e718ccf82 301 SUPERFAMILY SSF52374 1 280 1.97E-106 T 13-10-2018 VEA_002560 6e87070a4fd7512b6c6fc59e718ccf82 301 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 3.8E-100 T 13-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 VEA_002560 6e87070a4fd7512b6c6fc59e718ccf82 301 Gene3D G3DSA:3.40.50.620 1 179 6.3E-80 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_002560 6e87070a4fd7512b6c6fc59e718ccf82 301 Gene3D G3DSA:3.30.1300.10 181 283 2.7E-26 T 13-10-2018 VEA_002560 6e87070a4fd7512b6c6fc59e718ccf82 301 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 40.047 T 13-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 VEA_002560 6e87070a4fd7512b6c6fc59e718ccf82 301 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 24 62 9.1E-9 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VEA_002560 6e87070a4fd7512b6c6fc59e718ccf82 301 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 281 3.5E-103 T 13-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 VEA_000920 f5de61c90e1fa4cfd79d68d7b0735727 211 Pfam PF12408 Ribose-5-phosphate isomerase 163 209 8.0E-21 T 13-10-2018 IPR022133 Ribose-5-phosphate isomerase, C-terminal VEA_000920 f5de61c90e1fa4cfd79d68d7b0735727 211 Gene3D G3DSA:3.40.1400.10 1 211 9.5E-101 T 13-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 VEA_000920 f5de61c90e1fa4cfd79d68d7b0735727 211 SUPERFAMILY SSF89623 1 161 4.71E-35 T 13-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 VEA_000920 f5de61c90e1fa4cfd79d68d7b0735727 211 Pfam PF02502 Ribose/Galactose Isomerase 3 136 4.2E-28 T 13-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 VEA_000785 08c716dc664d02eb9ab7c755355ac07f 104 Gene3D G3DSA:3.30.70.100 2 96 3.8E-5 T 13-10-2018 VEA_000785 08c716dc664d02eb9ab7c755355ac07f 104 SUPERFAMILY SSF54909 3 86 1.56E-12 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel VEA_003462 d68c144892603b22118cbf43b71465cc 205 Gene3D G3DSA:3.30.420.10 3 194 3.1E-35 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VEA_003462 d68c144892603b22118cbf43b71465cc 205 SMART SM00479 8 191 1.8E-21 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VEA_003462 d68c144892603b22118cbf43b71465cc 205 Pfam PF00929 Exonuclease 10 179 2.1E-17 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VEA_003462 d68c144892603b22118cbf43b71465cc 205 SUPERFAMILY SSF53098 9 190 4.45E-36 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily VEA_000492 9b025b26d087571eb9c5e08fc4826b42 333 Gene3D G3DSA:3.40.50.1360 60 325 2.9E-80 T 13-10-2018 VEA_000492 9b025b26d087571eb9c5e08fc4826b42 333 SUPERFAMILY SSF100950 70 320 3.6E-64 T 13-10-2018 IPR037171 NagB/RpiA transferase-like VEA_000492 9b025b26d087571eb9c5e08fc4826b42 333 Pfam PF04198 Putative sugar-binding domain 66 320 2.1E-77 T 13-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 VEA_000492 9b025b26d087571eb9c5e08fc4826b42 333 Gene3D G3DSA:1.10.10.60 9 59 2.9E-18 T 13-10-2018 VEA_003439 299565daa90376691c8943892d736687 66 Gene3D G3DSA:3.40.30.10 1 66 9.5E-11 T 13-10-2018 VEA_003439 299565daa90376691c8943892d736687 66 SUPERFAMILY SSF52833 12 59 7.08E-5 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VEA_003439 299565daa90376691c8943892d736687 66 Pfam PF05768 Glutaredoxin-like domain (DUF836) 8 57 2.0E-9 T 13-10-2018 IPR008554 Glutaredoxin-like VEA_000626 bf0957c71175c06e8de03485815f810d 170 SUPERFAMILY SSF51182 28 140 1.66E-22 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily VEA_000626 bf0957c71175c06e8de03485815f810d 170 Gene3D G3DSA:2.60.120.10 13 159 1.1E-47 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VEA_000626 bf0957c71175c06e8de03485815f810d 170 Pfam PF12973 ChrR Cupin-like domain 28 105 9.5E-8 T 13-10-2018 IPR025979 ChrR-like cupin domain VEA_000989 095b23126760014b7fe2ea3dcfa35fbc 310 SMART SM00382 39 233 1.0E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_000989 095b23126760014b7fe2ea3dcfa35fbc 310 Pfam PF00005 ABC transporter 30 184 8.0E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_000989 095b23126760014b7fe2ea3dcfa35fbc 310 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_000989 095b23126760014b7fe2ea3dcfa35fbc 310 SUPERFAMILY SSF52540 5 254 5.2E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000989 095b23126760014b7fe2ea3dcfa35fbc 310 Gene3D G3DSA:3.40.50.300 3 302 1.1E-79 T 13-10-2018 VEA_000989 095b23126760014b7fe2ea3dcfa35fbc 310 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 265 4.2E-8 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VEA_003471 1cb891e50cba3b6c751e98ae6da914a1 158 Pfam PF05751 FixH 7 147 1.7E-41 T 13-10-2018 IPR008620 Nitrogen fixation protein FixH VEA_003297 cd0df8e8a77b3437f75eb516786b22de 173 Gene3D G3DSA:3.40.630.30 1 161 3.0E-22 T 13-10-2018 VEA_003297 cd0df8e8a77b3437f75eb516786b22de 173 Pfam PF13527 Acetyltransferase (GNAT) domain 9 123 2.0E-9 T 13-10-2018 VEA_003297 cd0df8e8a77b3437f75eb516786b22de 173 SUPERFAMILY SSF55729 9 132 1.03E-17 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_003289 14ab9d270a54b499e1e1c4255c453bf0 714 Gene3D G3DSA:3.40.50.300 1 418 9.2E-16 T 13-10-2018 VEA_003289 14ab9d270a54b499e1e1c4255c453bf0 714 SUPERFAMILY SSF52540 1 404 4.35E-12 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003289 14ab9d270a54b499e1e1c4255c453bf0 714 Pfam PF13175 AAA ATPase domain 1 394 3.7E-58 T 13-10-2018 VEA_003403 c863aefc7c8a7eab401c39175322ea61 436 Pfam PF02321 Outer membrane efflux protein 24 210 3.3E-27 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VEA_003403 c863aefc7c8a7eab401c39175322ea61 436 Pfam PF02321 Outer membrane efflux protein 233 416 1.2E-29 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VEA_003403 c863aefc7c8a7eab401c39175322ea61 436 SUPERFAMILY SSF56954 23 430 2.22E-87 T 13-10-2018 VEA_003403 c863aefc7c8a7eab401c39175322ea61 436 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 22 430 2.4E-121 T 13-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 VEA_003403 c863aefc7c8a7eab401c39175322ea61 436 Gene3D G3DSA:1.20.1600.10 22 427 1.9E-83 T 13-10-2018 VEA_001585 4a0ab62bb4cc506bc351c728b538fc8c 364 Pfam PF00676 Dehydrogenase E1 component 36 323 1.0E-75 T 13-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 VEA_001585 4a0ab62bb4cc506bc351c728b538fc8c 364 SUPERFAMILY SSF52518 22 357 6.45E-92 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold VEA_001585 4a0ab62bb4cc506bc351c728b538fc8c 364 Gene3D G3DSA:3.40.50.970 1 351 1.7E-102 T 13-10-2018 VEA_001585 4a0ab62bb4cc506bc351c728b538fc8c 364 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 8 350 9.8E-136 T 13-10-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 VEA_000075 cc787e1e5a63cee6c1f5ef59a5c2ebc2 443 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 6 440 7.0E-147 T 13-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VEA_000075 cc787e1e5a63cee6c1f5ef59a5c2ebc2 443 PIRSF PIRSF004539 1 441 2.4E-185 T 13-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VEA_000075 cc787e1e5a63cee6c1f5ef59a5c2ebc2 443 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 373 1.0E-149 T 13-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VEA_001900 5f98ae11aad3bdef0d89a84b7a82d116 314 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 20 296 23.659 T 13-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial VEA_001900 5f98ae11aad3bdef0d89a84b7a82d116 314 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 21 279 7.6E-81 T 13-10-2018 IPR017039 Virulence factor BrkB VEA_001900 5f98ae11aad3bdef0d89a84b7a82d116 314 PIRSF PIRSF035875 10 295 5.2E-53 T 13-10-2018 IPR017039 Virulence factor BrkB VEA_001900 5f98ae11aad3bdef0d89a84b7a82d116 314 Pfam PF03631 Virulence factor BrkB 33 280 2.4E-58 T 13-10-2018 IPR017039 Virulence factor BrkB VEA_003089 0641307743f86b0908a2bc81d22afd89 41 ProDom PD926058 BIOSYNTHESIS PEPTIDE LEADER AROMATIC VC1176 VV1222 OPERON ACID AMINO AMINO-ACID 1 41 2.0E-7 T 13-10-2018 IPR012639 Tryptophan operon leader peptide VEA_003089 0641307743f86b0908a2bc81d22afd89 41 Pfam PF08056 Tryptophan operon leader peptide 1 41 5.3E-30 T 13-10-2018 IPR012639 Tryptophan operon leader peptide VEA_001912 84abcefed03c10759a834b5f66cf608b 162 Pfam PF10675 Protein of unknown function (DUF2489) 14 145 2.5E-45 T 13-10-2018 IPR019617 Domain of unknown function DUF2489 VEA_003888 a3e69410f289d4e4b45f354884e340e7 442 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 181 402 1.6E-10 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VEA_003888 a3e69410f289d4e4b45f354884e340e7 442 SUPERFAMILY SSF56219 175 440 1.28E-62 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VEA_003888 a3e69410f289d4e4b45f354884e340e7 442 Gene3D G3DSA:3.60.10.10 170 441 4.5E-64 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VEA_000441 17c926fadbe5f47f1cea6eca3f3ca53a 168 PIRSF PIRSF028301 1 168 2.2E-63 T 13-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 VEA_000441 17c926fadbe5f47f1cea6eca3f3ca53a 168 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 4 157 8.7E-57 T 13-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 VEA_000441 17c926fadbe5f47f1cea6eca3f3ca53a 168 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 6 157 1.2E-58 T 13-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 VEA_003369 7e066a2eb4fe380db81dda5e06073879 124 TIGRFAM TIGR02503 type_III_SycN: type III secretion chaperone SycN 4 121 2.1E-46 T 13-10-2018 IPR012673 Type III secretion system chaperone SycN GO:0009306 VEA_003369 7e066a2eb4fe380db81dda5e06073879 124 Pfam PF05932 Tir chaperone protein (CesT) family 9 117 5.3E-5 T 13-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 VEA_003369 7e066a2eb4fe380db81dda5e06073879 124 Gene3D G3DSA:3.30.1460.10 1 124 7.0E-49 T 13-10-2018 VEA_003369 7e066a2eb4fe380db81dda5e06073879 124 SUPERFAMILY SSF69635 2 121 9.81E-47 T 13-10-2018 VEA_000533 73cff4490b29fb0dca7056753139aeb7 345 Pfam PF11168 Protein of unknown function (DUF2955) 15 154 3.1E-52 T 13-10-2018 IPR022604 Protein of unknown function DUF2955 VEA_000533 73cff4490b29fb0dca7056753139aeb7 345 PIRSF PIRSF029594 8 345 2.4E-137 T 13-10-2018 IPR016926 Uncharacterised conserved protein UCP029594 VEA_003402 d87664489bf4636f07b0e6deb21778e7 204 PRINTS PR01021 OMPA domain signature 84 106 4.9E-7 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEA_003402 d87664489bf4636f07b0e6deb21778e7 204 PRINTS PR01021 OMPA domain signature 114 129 4.9E-7 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEA_003402 d87664489bf4636f07b0e6deb21778e7 204 PRINTS PR01021 OMPA domain signature 129 145 4.9E-7 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VEA_003402 d87664489bf4636f07b0e6deb21778e7 204 Gene3D G3DSA:3.30.1330.60 54 189 2.7E-28 T 13-10-2018 IPR036737 OmpA-like domain superfamily VEA_003402 d87664489bf4636f07b0e6deb21778e7 204 SUPERFAMILY SSF103088 55 182 7.46E-29 T 13-10-2018 IPR036737 OmpA-like domain superfamily VEA_003402 d87664489bf4636f07b0e6deb21778e7 204 Pfam PF00691 OmpA family 83 178 5.0E-18 T 13-10-2018 IPR006665 OmpA-like domain VEA_000397 497bce31df72cbfc0474986f7a2c9228 201 Gene3D G3DSA:3.40.50.150 1 200 2.3E-43 T 13-10-2018 VEA_000397 497bce31df72cbfc0474986f7a2c9228 201 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 8 194 5.2E-31 T 13-10-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 VEA_000397 497bce31df72cbfc0474986f7a2c9228 201 SUPERFAMILY SSF53335 4 199 8.9E-45 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_003677 aa0270874683b9203d59c38541ae0907 530 Gene3D G3DSA:2.30.42.10 141 246 8.0E-68 T 13-10-2018 VEA_003677 aa0270874683b9203d59c38541ae0907 530 Gene3D G3DSA:3.30.750.170 91 437 8.0E-68 T 13-10-2018 VEA_003677 aa0270874683b9203d59c38541ae0907 530 Gene3D G3DSA:3.90.226.10 247 485 8.0E-68 T 13-10-2018 VEA_003677 aa0270874683b9203d59c38541ae0907 530 SUPERFAMILY SSF52096 141 460 2.98E-30 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEA_003677 aa0270874683b9203d59c38541ae0907 530 SUPERFAMILY SSF50156 147 213 3.33E-8 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 VEA_003677 aa0270874683b9203d59c38541ae0907 530 Pfam PF03572 Peptidase family S41 263 409 1.2E-22 T 13-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 VEA_003677 aa0270874683b9203d59c38541ae0907 530 SMART SM00245 233 444 0.0028 T 13-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 VEA_003654 0d52a292c28be24010c0a0324222e3f7 364 Gene3D G3DSA:2.60.120.10 53 155 8.9E-13 T 13-10-2018 IPR014710 RmlC-like jelly roll fold VEA_003654 0d52a292c28be24010c0a0324222e3f7 364 Pfam PF04209 homogentisate 1,2-dioxygenase 56 362 3.0E-22 T 13-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 VEA_003654 0d52a292c28be24010c0a0324222e3f7 364 SUPERFAMILY SSF51182 44 362 7.79E-92 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily VEA_002648 020c55a932d59dd89f9e746f35fba38c 402 Gene3D G3DSA:3.40.50.2300 55 141 3.1E-5 T 13-10-2018 VEA_002648 020c55a932d59dd89f9e746f35fba38c 402 Gene3D G3DSA:3.40.50.300 150 386 8.3E-41 T 13-10-2018 VEA_002648 020c55a932d59dd89f9e746f35fba38c 402 SUPERFAMILY SSF52540 152 384 1.13E-27 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002648 020c55a932d59dd89f9e746f35fba38c 402 Pfam PF13614 AAA domain 153 305 1.4E-10 T 13-10-2018 IPR025669 AAA domain VEA_004026 8c1b619a7b3b9a8ece738ee6c24c0b56 305 Pfam PF03601 Conserved hypothetical protein 698 17 285 3.9E-54 T 13-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 VEA_003155 5a3192fbe7b6fd9c24f427a7c56387d3 453 Gene3D G3DSA:3.30.1330.90 10 159 3.5E-49 T 13-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 VEA_003155 5a3192fbe7b6fd9c24f427a7c56387d3 453 SUPERFAMILY SSF143548 16 157 4.18E-44 T 13-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 VEA_003155 5a3192fbe7b6fd9c24f427a7c56387d3 453 Pfam PF03315 Serine dehydratase beta chain 3 155 4.2E-54 T 13-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 VEA_003155 5a3192fbe7b6fd9c24f427a7c56387d3 453 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 1.4E-226 T 13-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 VEA_003155 5a3192fbe7b6fd9c24f427a7c56387d3 453 Pfam PF03313 Serine dehydratase alpha chain 184 448 5.6E-97 T 13-10-2018 IPR005130 Serine dehydratase-like, alpha subunit VEA_002850 e23c6288f960ac93f53718c3b751d583 257 Pfam PF04333 MlaA lipoprotein 40 232 2.3E-62 T 13-10-2018 IPR007428 MlaA lipoprotein GO:0016020 VEA_002850 e23c6288f960ac93f53718c3b751d583 257 PRINTS PR01805 VacJ lipoprotein signature 148 165 1.6E-29 T 13-10-2018 IPR007428 MlaA lipoprotein GO:0016020 VEA_002850 e23c6288f960ac93f53718c3b751d583 257 PRINTS PR01805 VacJ lipoprotein signature 42 55 1.6E-29 T 13-10-2018 IPR007428 MlaA lipoprotein GO:0016020 VEA_002850 e23c6288f960ac93f53718c3b751d583 257 PRINTS PR01805 VacJ lipoprotein signature 111 128 1.6E-29 T 13-10-2018 IPR007428 MlaA lipoprotein GO:0016020 VEA_002850 e23c6288f960ac93f53718c3b751d583 257 PRINTS PR01805 VacJ lipoprotein signature 60 76 1.6E-29 T 13-10-2018 IPR007428 MlaA lipoprotein GO:0016020 VEA_003819 7477ab4d52356651824d7ebd6a17bd4a 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 3.8E-16 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VEA_003819 7477ab4d52356651824d7ebd6a17bd4a 331 Pfam PF00005 ABC transporter 24 187 3.8E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_003819 7477ab4d52356651824d7ebd6a17bd4a 331 SUPERFAMILY SSF52540 4 268 9.84E-50 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003819 7477ab4d52356651824d7ebd6a17bd4a 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 1.4E-20 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VEA_003819 7477ab4d52356651824d7ebd6a17bd4a 331 Gene3D G3DSA:3.40.50.300 2 331 5.1E-73 T 13-10-2018 VEA_003819 7477ab4d52356651824d7ebd6a17bd4a 331 SMART SM00382 32 230 5.0E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_003727 b96563b47f0797198e873f9f17072ddd 226 Gene3D G3DSA:3.40.1550.10 8 173 3.7E-20 T 13-10-2018 IPR028976 CheC-like superfamily VEA_003727 b96563b47f0797198e873f9f17072ddd 226 Pfam PF11813 Protein of unknown function (DUF3334) 3 226 1.5E-117 T 13-10-2018 IPR024513 Protein of unknown function DUF3334 VEA_003727 b96563b47f0797198e873f9f17072ddd 226 SUPERFAMILY SSF103039 10 173 3.92E-24 T 13-10-2018 IPR028976 CheC-like superfamily VEA_001664 c844eda86ee87ff143d00d924cd3040a 331 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 6 331 36.137 T 13-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 VEA_001664 c844eda86ee87ff143d00d924cd3040a 331 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 8 327 1.7E-126 T 13-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 VEA_001664 c844eda86ee87ff143d00d924cd3040a 331 Gene3D G3DSA:3.40.718.10 1 331 1.9E-121 T 13-10-2018 VEA_001664 c844eda86ee87ff143d00d924cd3040a 331 SUPERFAMILY SSF53659 7 329 5.6E-109 T 13-10-2018 VEA_001664 c844eda86ee87ff143d00d924cd3040a 331 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 35 324 2.0E-106 T 13-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 VEA_001157 6bd517ed5ac55bf4439ae11e79c058a8 360 Gene3D G3DSA:3.40.50.720 12 156 1.9E-29 T 13-10-2018 VEA_001157 6bd517ed5ac55bf4439ae11e79c058a8 360 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 14 131 8.4E-17 T 13-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 VEA_001157 6bd517ed5ac55bf4439ae11e79c058a8 360 SUPERFAMILY SSF51735 12 143 1.06E-19 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_001010 f96920403de29622ecdbda5b33a73461 227 Gene3D G3DSA:3.10.620.30 27 219 4.4E-71 T 13-10-2018 VEA_001010 f96920403de29622ecdbda5b33a73461 227 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 62 168 1.3E-12 T 13-10-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted VEA_001498 4c42c5a7c272a8f3c24456da1ac72254 485 Pfam PF11840 Protein of unknown function (DUF3360) 2 484 2.5E-266 T 13-10-2018 IPR021794 Protein of unknown function DUF3360 VEA_000498 bc55843c56457806bab178ef0da3b121 350 Pfam PF00793 DAHP synthetase I family 38 337 1.2E-105 T 13-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VEA_000498 bc55843c56457806bab178ef0da3b121 350 PIRSF PIRSF001361 1 350 3.1E-161 T 13-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VEA_000498 bc55843c56457806bab178ef0da3b121 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 348 1.6E-169 T 13-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VEA_000498 bc55843c56457806bab178ef0da3b121 350 Gene3D G3DSA:3.20.20.70 1 349 2.1E-165 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_000498 bc55843c56457806bab178ef0da3b121 350 SUPERFAMILY SSF51569 6 347 7.33E-137 T 13-10-2018 VEA_002624 eec443ef5c242e3c2a025262f381682e 151 Pfam PF00583 Acetyltransferase (GNAT) family 17 121 3.4E-13 T 13-10-2018 IPR000182 GNAT domain VEA_002624 eec443ef5c242e3c2a025262f381682e 151 Gene3D G3DSA:3.40.630.30 3 149 4.7E-38 T 13-10-2018 VEA_002624 eec443ef5c242e3c2a025262f381682e 151 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 12 145 1.6E-36 T 13-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 VEA_002624 eec443ef5c242e3c2a025262f381682e 151 SUPERFAMILY SSF55729 1 147 2.06E-28 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_003046 4c4617b2cf92d32f86fb0d62ebb6e373 377 Gene3D G3DSA:2.40.50.100 56 216 1.1E-53 T 13-10-2018 VEA_003046 4c4617b2cf92d32f86fb0d62ebb6e373 377 Gene3D G3DSA:2.40.30.170 45 307 1.1E-53 T 13-10-2018 VEA_003046 4c4617b2cf92d32f86fb0d62ebb6e373 377 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 35 368 5.4E-36 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VEA_003046 4c4617b2cf92d32f86fb0d62ebb6e373 377 Gene3D G3DSA:2.40.420.20 40 367 1.1E-53 T 13-10-2018 VEA_003046 4c4617b2cf92d32f86fb0d62ebb6e373 377 SUPERFAMILY SSF111369 49 253 1.31E-15 T 13-10-2018 VEA_003046 4c4617b2cf92d32f86fb0d62ebb6e373 377 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 256 1.7E-16 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VEA_003046 4c4617b2cf92d32f86fb0d62ebb6e373 377 Gene3D G3DSA:1.10.287.470 90 176 1.1E-53 T 13-10-2018 VEA_001959 ba28bbb5ab8a43ee000a299d782848fe 174 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 7 162 8.7E-64 T 13-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 VEA_001959 ba28bbb5ab8a43ee000a299d782848fe 174 SUPERFAMILY SSF52540 4 160 1.24E-25 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001959 ba28bbb5ab8a43ee000a299d782848fe 174 Gene3D G3DSA:3.40.50.300 2 168 8.7E-64 T 13-10-2018 VEA_001959 ba28bbb5ab8a43ee000a299d782848fe 174 Pfam PF01202 Shikimate kinase 13 141 7.8E-14 T 13-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 VEA_004425 245859786b919ff4b80ad2d0e3977d2d 382 Pfam PF02690 Na+/Pi-cotransporter 218 333 1.6E-18 T 13-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 VEA_004425 245859786b919ff4b80ad2d0e3977d2d 382 Pfam PF02690 Na+/Pi-cotransporter 30 150 2.1E-22 T 13-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 VEA_001058 724f15d4ba703012c338b420a3272f14 480 Pfam PF02378 Phosphotransferase system, EIIC 14 322 7.1E-81 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VEA_001058 724f15d4ba703012c338b420a3272f14 480 SUPERFAMILY SSF55604 404 476 1.83E-19 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VEA_001058 724f15d4ba703012c338b420a3272f14 480 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 417 434 - T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VEA_001058 724f15d4ba703012c338b420a3272f14 480 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 380 463 1.5E-16 T 13-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VEA_001058 724f15d4ba703012c338b420a3272f14 480 Pfam PF00367 phosphotransferase system, EIIB 408 439 1.6E-13 T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VEA_001058 724f15d4ba703012c338b420a3272f14 480 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 478 4.4E-234 T 13-10-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0016021|GO:1904659 VEA_001058 724f15d4ba703012c338b420a3272f14 480 Gene3D G3DSA:3.30.1360.60 400 479 4.4E-26 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VEA_003858 d0f841b8ec6217d58da615d0cd12ba09 129 Pfam PF12915 Protein of unknown function (DUF3833) 1 127 8.9E-52 T 13-10-2018 IPR024409 Protein of unknown function DUF3833 VEA_003203 9460e3cab28f19e5d39b46953db77024 169 Gene3D G3DSA:3.40.1440.10 51 169 4.8E-5 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 VEA_002698 f0978a44f361ad7dca58c36715e8db53 198 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 3 117 7.7E-16 T 13-10-2018 IPR003111 Lon, substrate-binding domain VEA_002698 f0978a44f361ad7dca58c36715e8db53 198 Gene3D G3DSA:2.30.130.40 1 111 5.4E-30 T 13-10-2018 VEA_002698 f0978a44f361ad7dca58c36715e8db53 198 SMART SM00464 3 190 0.0063 T 13-10-2018 IPR003111 Lon, substrate-binding domain VEA_002698 f0978a44f361ad7dca58c36715e8db53 198 SUPERFAMILY SSF88697 3 189 4.97E-46 T 13-10-2018 IPR015947 PUA-like superfamily VEA_004472 35b54b5e721004db6555a6ae064322b4 317 Pfam PF03186 CobD/Cbib protein 19 286 3.4E-30 T 13-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 VEA_003576 95f77c562c14f6e19793f08fb5467120 197 SMART SM00702 8 184 5.8E-35 T 13-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 VEA_003576 95f77c562c14f6e19793f08fb5467120 197 Gene3D G3DSA:2.60.120.620 1 186 7.3E-54 T 13-10-2018 VEA_003576 95f77c562c14f6e19793f08fb5467120 197 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 94 184 2.6E-21 T 13-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 VEA_001122 6e13814e2da5316de8551c2ae1835fa7 213 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 7 203 6.7E-49 T 13-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VEA_001122 6e13814e2da5316de8551c2ae1835fa7 213 Pfam PF01914 MarC family integral membrane protein 8 206 3.7E-52 T 13-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VEA_001455 5f6288c041b572ad6a0825c17eae743d 210 Gene3D G3DSA:3.40.30.10 24 208 1.0E-34 T 13-10-2018 VEA_001455 5f6288c041b572ad6a0825c17eae743d 210 SUPERFAMILY SSF52833 27 207 5.14E-22 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VEA_001455 5f6288c041b572ad6a0825c17eae743d 210 Pfam PF13462 Thioredoxin 54 200 3.7E-6 T 13-10-2018 IPR012336 Thioredoxin-like fold VEA_000219 42808ce0961337abccff9940528da98c 177 Pfam PF13275 S4 domain 25 86 9.9E-22 T 13-10-2018 VEA_000219 42808ce0961337abccff9940528da98c 177 Gene3D G3DSA:3.10.290.10 14 88 5.8E-21 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VEA_000219 42808ce0961337abccff9940528da98c 177 SUPERFAMILY SSF55174 14 87 5.1E-17 T 13-10-2018 VEA_000891 df023097ac6f60ee67b5f475644d9e06 161 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 147 2.1E-15 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VEA_000891 df023097ac6f60ee67b5f475644d9e06 161 SUPERFAMILY SSF54593 1 150 1.88E-28 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEA_000891 df023097ac6f60ee67b5f475644d9e06 161 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 13-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 VEA_000891 df023097ac6f60ee67b5f475644d9e06 161 Gene3D G3DSA:3.10.180.10 1 150 3.0E-25 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEA_003879 69b9a4ef3aa6f4198e01468dd17fb51f 1014 SMART SM00843 946 1011 5.3E-38 T 13-10-2018 IPR018541 FtsK gamma domain VEA_003879 69b9a4ef3aa6f4198e01468dd17fb51f 1014 SUPERFAMILY SSF52540 603 915 2.66E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003879 69b9a4ef3aa6f4198e01468dd17fb51f 1014 Gene3D G3DSA:3.30.980.40 521 625 4.5E-33 T 13-10-2018 VEA_003879 69b9a4ef3aa6f4198e01468dd17fb51f 1014 Pfam PF09397 Ftsk gamma domain 948 1008 1.1E-25 T 13-10-2018 IPR018541 FtsK gamma domain VEA_003879 69b9a4ef3aa6f4198e01468dd17fb51f 1014 Gene3D G3DSA:3.40.50.300 626 928 3.2E-120 T 13-10-2018 VEA_003879 69b9a4ef3aa6f4198e01468dd17fb51f 1014 SUPERFAMILY SSF46785 946 1011 4.9E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_003879 69b9a4ef3aa6f4198e01468dd17fb51f 1014 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 29 199 1.6E-41 T 13-10-2018 IPR025199 DNA translocase FtsK, 4TM region VEA_003879 69b9a4ef3aa6f4198e01468dd17fb51f 1014 Pfam PF01580 FtsK/SpoIIIE family 629 842 6.3E-71 T 13-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 VEA_003879 69b9a4ef3aa6f4198e01468dd17fb51f 1014 Gene3D G3DSA:1.10.10.10 950 1013 4.0E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_003939 6f9b6a8c921926cfe79c3bae9a530a05 236 SMART SM00448 3 113 3.1E-37 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_003939 6f9b6a8c921926cfe79c3bae9a530a05 236 Gene3D G3DSA:3.40.50.2300 1 135 4.6E-34 T 13-10-2018 VEA_003939 6f9b6a8c921926cfe79c3bae9a530a05 236 Pfam PF00072 Response regulator receiver domain 5 113 1.3E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_003939 6f9b6a8c921926cfe79c3bae9a530a05 236 SUPERFAMILY SSF52172 2 125 4.41E-37 T 13-10-2018 IPR011006 CheY-like superfamily VEA_003939 6f9b6a8c921926cfe79c3bae9a530a05 236 Gene3D G3DSA:1.10.10.10 136 236 5.0E-31 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_003939 6f9b6a8c921926cfe79c3bae9a530a05 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 233 2.1E-20 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEA_003939 6f9b6a8c921926cfe79c3bae9a530a05 236 SUPERFAMILY SSF46894 133 234 1.59E-26 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VEA_003939 6f9b6a8c921926cfe79c3bae9a530a05 236 SMART SM00862 157 233 3.4E-19 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VEA_002253 57e810fb6113db5eb75245d0ae3e37e1 375 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 10 343 2.7E-153 T 13-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 VEA_002253 57e810fb6113db5eb75245d0ae3e37e1 375 SUPERFAMILY SSF54862 165 316 4.18E-20 T 13-10-2018 VEA_002253 57e810fb6113db5eb75245d0ae3e37e1 375 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 189 200 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VEA_002253 57e810fb6113db5eb75245d0ae3e37e1 375 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 3 311 50.815 T 13-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 VEA_002253 57e810fb6113db5eb75245d0ae3e37e1 375 Pfam PF13484 4Fe-4S double cluster binding domain 188 252 4.9E-20 T 13-10-2018 VEA_002253 57e810fb6113db5eb75245d0ae3e37e1 375 Pfam PF08331 Domain of unknown function (DUF1730) 58 136 3.8E-23 T 13-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 VEA_000663 e8d79d0fb2e49ca25b78da8f923bff73 296 SUPERFAMILY SSF161098 24 291 1.4E-39 T 13-10-2018 IPR035906 MetI-like superfamily VEA_000663 e8d79d0fb2e49ca25b78da8f923bff73 296 Gene3D G3DSA:1.10.3720.10 23 285 3.7E-32 T 13-10-2018 IPR035906 MetI-like superfamily VEA_000663 e8d79d0fb2e49ca25b78da8f923bff73 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 283 8.7E-9 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_003263 eb1687f926aee2abad2716ea949a177f 156 Gene3D G3DSA:3.40.630.30 4 153 2.5E-31 T 13-10-2018 VEA_003263 eb1687f926aee2abad2716ea949a177f 156 Pfam PF00583 Acetyltransferase (GNAT) family 37 143 8.2E-15 T 13-10-2018 IPR000182 GNAT domain VEA_003263 eb1687f926aee2abad2716ea949a177f 156 SUPERFAMILY SSF55729 1 143 1.11E-24 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_004087 1cd2de99281767749004b6962658a92b 270 Gene3D G3DSA:3.40.50.300 1 260 1.1E-72 T 13-10-2018 VEA_004087 1cd2de99281767749004b6962658a92b 270 PIRSF PIRSF003092 1 270 2.9E-93 T 13-10-2018 IPR025501 ATP binding protein MinD VEA_004087 1cd2de99281767749004b6962658a92b 270 SUPERFAMILY SSF52540 1 268 9.9E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_004087 1cd2de99281767749004b6962658a92b 270 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 227 1.4E-19 T 13-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain VEA_004087 1cd2de99281767749004b6962658a92b 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 3.1E-109 T 13-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 VEA_000647 db2552d70e41ab46ccbe4801152e47f6 278 Pfam PF03618 Kinase/pyrophosphorylase 10 267 1.2E-73 T 13-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 VEA_000647 db2552d70e41ab46ccbe4801152e47f6 278 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 7 276 66.591 T 13-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein VEA_002827 daa6f63047dac1b4f453145c2556e146 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 12 253 4.1E-73 T 13-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 VEA_002827 daa6f63047dac1b4f453145c2556e146 260 Pfam PF01311 Bacterial export proteins, family 1 13 245 5.3E-56 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VEA_002827 daa6f63047dac1b4f453145c2556e146 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 5.0E-16 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VEA_002827 daa6f63047dac1b4f453145c2556e146 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 5.0E-16 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VEA_002827 daa6f63047dac1b4f453145c2556e146 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 5.0E-16 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VEA_002827 daa6f63047dac1b4f453145c2556e146 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 5.0E-16 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VEA_001537 a551c9d53a377498496f9973040ae5e2 289 Gene3D G3DSA:3.20.20.140 13 289 1.5E-80 T 13-10-2018 VEA_001537 a551c9d53a377498496f9973040ae5e2 289 SUPERFAMILY SSF51556 21 289 2.6E-69 T 13-10-2018 IPR032466 Metal-dependent hydrolase VEA_001537 a551c9d53a377498496f9973040ae5e2 289 Pfam PF04909 Amidohydrolase 26 289 2.2E-33 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VEA_003918 5badfd73eea84f75aa728f7cb130d6f6 65 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 1 62 2.1E-24 T 13-10-2018 IPR011846 Cyd operon protein YbgE VEA_003918 5badfd73eea84f75aa728f7cb130d6f6 65 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 1 65 7.2E-27 T 13-10-2018 IPR011846 Cyd operon protein YbgE VEA_001353 ee5f93f3b8098f8c81e7024b440cd72f 137 Pfam PF02472 Biopolymer transport protein ExbD/TolR 14 134 1.8E-21 T 13-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 VEA_004298 4df30eefa98fa7dd3727ea6a137bf1b6 117 Pfam PF03658 RnfH family Ubiquitin 8 90 7.3E-34 T 13-10-2018 IPR005346 RnfH protein VEA_004298 4df30eefa98fa7dd3727ea6a137bf1b6 117 Hamap MF_00460 Protein RnfH [rnfH]. 8 98 24.862 T 13-10-2018 IPR005346 RnfH protein VEA_004298 4df30eefa98fa7dd3727ea6a137bf1b6 117 SUPERFAMILY SSF54285 6 82 5.89E-26 T 13-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VEA_004298 4df30eefa98fa7dd3727ea6a137bf1b6 117 Gene3D G3DSA:3.10.20.280 2 92 2.8E-33 T 13-10-2018 IPR037021 RnfH superfamily VEA_002861 115ef23966905f0c7635475799ef1003 176 Gene3D G3DSA:3.30.1370.110 49 175 1.7E-27 T 13-10-2018 VEA_002861 115ef23966905f0c7635475799ef1003 176 Pfam PF01713 Smr domain 97 171 2.0E-17 T 13-10-2018 IPR002625 Smr domain VEA_002861 115ef23966905f0c7635475799ef1003 176 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 173 39.566 T 13-10-2018 IPR022990 Uncharacterised protein family UPF0115 VEA_002861 115ef23966905f0c7635475799ef1003 176 SMART SM00463 94 172 1.5E-15 T 13-10-2018 IPR002625 Smr domain VEA_002861 115ef23966905f0c7635475799ef1003 176 SUPERFAMILY SSF160443 95 171 2.48E-11 T 13-10-2018 IPR036063 Smr domain superfamily VEA_001789 466786e90c202b76a1b1a19ab878ad67 226 SUPERFAMILY SSF159270 27 224 1.03E-54 T 13-10-2018 IPR023373 YmcC-like superfamily VEA_001789 466786e90c202b76a1b1a19ab878ad67 226 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 22 220 4.5E-54 T 13-10-2018 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB VEA_001789 466786e90c202b76a1b1a19ab878ad67 226 Gene3D G3DSA:2.40.360.10 25 225 2.9E-56 T 13-10-2018 IPR023373 YmcC-like superfamily VEA_003738 e4044860e00130c44f23424be4d3c0de 224 Pfam PF02698 DUF218 domain 41 180 1.4E-21 T 13-10-2018 IPR003848 Domain of unknown function DUF218 VEA_001194 d6e52527dcd3bb8e1a23991adc1086ed 148 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 12 94 2.4E-6 T 13-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like VEA_001194 d6e52527dcd3bb8e1a23991adc1086ed 148 Gene3D G3DSA:3.30.530.20 1 148 7.1E-18 T 13-10-2018 IPR023393 START-like domain superfamily VEA_001194 d6e52527dcd3bb8e1a23991adc1086ed 148 SUPERFAMILY SSF55961 2 146 7.66E-20 T 13-10-2018 VEA_002500 63c97ec204eee449351171f423a0863e 243 Gene3D G3DSA:3.20.20.70 1 243 8.6E-110 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_002500 63c97ec204eee449351171f423a0863e 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 4.2E-106 T 13-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 VEA_002500 63c97ec204eee449351171f423a0863e 243 SUPERFAMILY SSF63892 4 242 1.96E-103 T 13-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 VEA_002500 63c97ec204eee449351171f423a0863e 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 239 6.2E-100 T 13-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 VEA_002500 63c97ec204eee449351171f423a0863e 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 134.299 T 13-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 VEA_003236 ccb1b97131115c258d552348aa7c0b3e 471 Pfam PF03235 Protein of unknown function DUF262 32 186 2.5E-26 T 13-10-2018 IPR004919 Domain of unknown function DUF262 VEA_002044 043c27aa828243b41a0ddc79f452c827 292 SUPERFAMILY SSF69593 48 282 3.27E-27 T 13-10-2018 VEA_002044 043c27aa828243b41a0ddc79f452c827 292 SMART SM00563 85 227 5.9E-20 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VEA_002044 043c27aa828243b41a0ddc79f452c827 292 Pfam PF01553 Acyltransferase 73 226 2.2E-15 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VEA_003506 387205274ae6586a7736ffb465896e31 239 Pfam PF00005 ABC transporter 25 165 1.1E-26 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_003506 387205274ae6586a7736ffb465896e31 239 Gene3D G3DSA:3.40.50.300 1 237 2.8E-51 T 13-10-2018 VEA_003506 387205274ae6586a7736ffb465896e31 239 SUPERFAMILY SSF52540 5 216 5.33E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003506 387205274ae6586a7736ffb465896e31 239 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_003506 387205274ae6586a7736ffb465896e31 239 SMART SM00382 29 202 9.3E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_001195 c145ab7ca90a84c4d4b2d4ada3ad29de 251 SUPERFAMILY SSF89550 5 245 4.45E-62 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 VEA_001195 c145ab7ca90a84c4d4b2d4ada3ad29de 251 SMART SM00481 6 80 3.6E-9 T 13-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal VEA_001195 c145ab7ca90a84c4d4b2d4ada3ad29de 251 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 3 246 52.328 T 13-10-2018 IPR023710 Probable phosphatase YcdX GO:0008270 VEA_001195 c145ab7ca90a84c4d4b2d4ada3ad29de 251 Gene3D G3DSA:3.20.20.140 3 248 2.2E-63 T 13-10-2018 VEA_000867 d5b4ab7b9a8a6fb1de3c0133110fce6d 220 SUPERFAMILY SSF48613 3 216 2.6E-67 T 13-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 VEA_000867 d5b4ab7b9a8a6fb1de3c0133110fce6d 220 Gene3D G3DSA:1.20.910.10 2 220 9.2E-63 T 13-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 VEA_000867 d5b4ab7b9a8a6fb1de3c0133110fce6d 220 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 12 216 8.1E-40 T 13-10-2018 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356 VEA_000867 d5b4ab7b9a8a6fb1de3c0133110fce6d 220 Pfam PF03070 TENA/THI-4/PQQC family 9 217 1.6E-45 T 13-10-2018 IPR004305 Thiaminase-2/PQQC VEA_004054 cc7697c6154c64c0ffa51b2dafb5a6e8 455 Pfam PF02386 Cation transport protein 52 437 7.3E-54 T 13-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 VEA_004054 cc7697c6154c64c0ffa51b2dafb5a6e8 455 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 42 427 3.3E-124 T 13-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 VEA_003645 4588d609495baab9337ff677cd86700a 295 Pfam PF00892 EamA-like transporter family 139 274 7.0E-10 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEA_003645 4588d609495baab9337ff677cd86700a 295 Pfam PF00892 EamA-like transporter family 3 124 4.0E-14 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEA_003645 4588d609495baab9337ff677cd86700a 295 SUPERFAMILY SSF103481 41 123 1.7E-6 T 13-10-2018 VEA_003674 657e9620f769f42cf7a492d3c0924947 510 Gene3D G3DSA:3.40.605.10 31 506 7.0E-209 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VEA_003674 657e9620f769f42cf7a492d3c0924947 510 Pfam PF00171 Aldehyde dehydrogenase family 7 453 6.1E-48 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VEA_003674 657e9620f769f42cf7a492d3c0924947 510 Gene3D G3DSA:3.40.309.10 256 441 7.0E-209 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VEA_003674 657e9620f769f42cf7a492d3c0924947 510 SUPERFAMILY SSF53720 7 503 1.06E-99 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VEA_003395 cd029e97cb6ea34ecbbdc65f3d0300c7 481 SUPERFAMILY SSF55811 32 150 4.6E-19 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VEA_003395 cd029e97cb6ea34ecbbdc65f3d0300c7 481 SUPERFAMILY SSF48317 158 354 9.29E-12 T 13-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily VEA_003395 cd029e97cb6ea34ecbbdc65f3d0300c7 481 Pfam PF00293 NUDIX domain 32 104 6.6E-11 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VEA_003395 cd029e97cb6ea34ecbbdc65f3d0300c7 481 ProSitePatterns PS00893 Nudix box signature. 59 80 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VEA_003395 cd029e97cb6ea34ecbbdc65f3d0300c7 481 Gene3D G3DSA:3.90.79.10 21 124 1.0E-14 T 13-10-2018 VEA_002779 edf49d45bca4b0892948e9162edc3bbd 281 SUPERFAMILY SSF56235 2 253 1.16E-50 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VEA_002779 edf49d45bca4b0892948e9162edc3bbd 281 Pfam PF13230 Glutamine amidotransferases class-II 1 260 3.7E-114 T 13-10-2018 IPR026869 Putative glutamine amidotransferase type 2 VEA_002779 edf49d45bca4b0892948e9162edc3bbd 281 Gene3D G3DSA:3.60.20.10 1 259 1.4E-99 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VEA_001694 d12cd4398dd5a58458ba79140d7343fc 570 Pfam PF07244 Surface antigen variable number repeat 101 163 1.7E-6 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VEA_001694 d12cd4398dd5a58458ba79140d7343fc 570 Gene3D G3DSA:2.40.160.50 262 570 1.4E-96 T 13-10-2018 VEA_001694 d12cd4398dd5a58458ba79140d7343fc 570 Gene3D G3DSA:3.10.20.310 20 96 2.5E-22 T 13-10-2018 VEA_001694 d12cd4398dd5a58458ba79140d7343fc 570 Pfam PF01103 Surface antigen 268 567 4.0E-29 T 13-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 VEA_001694 d12cd4398dd5a58458ba79140d7343fc 570 Gene3D G3DSA:3.10.20.310 97 184 1.8E-28 T 13-10-2018 VEA_001694 d12cd4398dd5a58458ba79140d7343fc 570 Pfam PF17243 POTRA domain TamA domain 1 25 95 7.3E-19 T 13-10-2018 IPR035243 TamA, POTRA domain 1 VEA_001694 d12cd4398dd5a58458ba79140d7343fc 570 Gene3D G3DSA:3.10.20.310 185 261 6.3E-18 T 13-10-2018 VEA_001076 8b254545dddcc93a4abc83ade37bfc33 317 Gene3D G3DSA:2.70.70.10 144 265 4.0E-43 T 13-10-2018 IPR011055 Duplicated hybrid motif VEA_001076 8b254545dddcc93a4abc83ade37bfc33 317 Pfam PF01551 Peptidase family M23 169 264 1.8E-30 T 13-10-2018 IPR016047 Peptidase M23 VEA_001076 8b254545dddcc93a4abc83ade37bfc33 317 SUPERFAMILY SSF51261 33 267 5.23E-53 T 13-10-2018 IPR011055 Duplicated hybrid motif VEA_003749 a96bcac384e16d067d868c0ffb471f9b 422 Pfam PF06097 Bacterial protein of unknown function (DUF945) 5 410 3.4E-40 T 13-10-2018 IPR010352 Protein of unknown function DUF945 VEA_004294 162cbf6419938989b540b581869c155e 294 Gene3D G3DSA:3.40.50.10330 23 289 1.1E-94 T 13-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 VEA_004294 162cbf6419938989b540b581869c155e 294 Pfam PF01513 ATP-NAD kinase 8 273 5.6E-72 T 13-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 VEA_004294 162cbf6419938989b540b581869c155e 294 Gene3D G3DSA:2.60.200.30 129 266 1.1E-94 T 13-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 VEA_004294 162cbf6419938989b540b581869c155e 294 Hamap MF_00361 NAD kinase [nadK]. 6 289 34.598 T 13-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 VEA_004294 162cbf6419938989b540b581869c155e 294 SUPERFAMILY SSF111331 8 290 1.7E-93 T 13-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily VEA_002271 117f64618c43b74230df77731034aa2a 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 5.1E-26 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VEA_002271 117f64618c43b74230df77731034aa2a 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 198 208 5.1E-26 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VEA_002271 117f64618c43b74230df77731034aa2a 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 5.1E-26 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VEA_002271 117f64618c43b74230df77731034aa2a 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 5.1E-26 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VEA_002271 117f64618c43b74230df77731034aa2a 338 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 334 2.5E-108 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VEA_002271 117f64618c43b74230df77731034aa2a 338 Gene3D G3DSA:1.10.240.10 191 304 9.7E-139 T 13-10-2018 VEA_002271 117f64618c43b74230df77731034aa2a 338 Gene3D G3DSA:3.40.50.620 5 333 9.7E-139 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_002271 117f64618c43b74230df77731034aa2a 338 SUPERFAMILY SSF52374 5 334 6.43E-90 T 13-10-2018 VEA_002271 117f64618c43b74230df77731034aa2a 338 Pfam PF00579 tRNA synthetases class I (W and Y) 3 289 1.9E-77 T 13-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 VEA_002271 117f64618c43b74230df77731034aa2a 338 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 335 40.536 T 13-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 VEA_001259 119958f2274f53e0d3b59a46955494e4 477 Pfam PF07603 Protein of unknown function (DUF1566) 291 427 1.2E-12 T 13-10-2018 IPR011460 Protein of unknown function DUF1566 VEA_002123 7d87e3b0d265f862926ef55701d3947e 205 Pfam PF01810 LysE type translocator 15 202 1.5E-35 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEA_002123 7d87e3b0d265f862926ef55701d3947e 205 PIRSF PIRSF006324 1 205 2.3E-56 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEA_003108 78bab9e560d2bdf2d8de3ecfd0b79abc 377 Gene3D G3DSA:1.10.620.20 2 341 1.9E-143 T 13-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 VEA_003108 78bab9e560d2bdf2d8de3ecfd0b79abc 377 SUPERFAMILY SSF47240 3 341 6.15E-111 T 13-10-2018 IPR009078 Ferritin-like superfamily VEA_003108 78bab9e560d2bdf2d8de3ecfd0b79abc 377 Pfam PF00268 Ribonucleotide reductase, small chain 34 333 3.2E-49 T 13-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VEA_003108 78bab9e560d2bdf2d8de3ecfd0b79abc 377 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 13-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VEA_000809 8ced1dca11156421f713607e117ef670 134 SUPERFAMILY SSF54403 49 115 1.28E-7 T 13-10-2018 VEA_001078 34f74f56245fe93251a3caed45e8042a 748 SUPERFAMILY SSF89550 446 657 1.37E-21 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 VEA_001078 34f74f56245fe93251a3caed45e8042a 748 Gene3D G3DSA:2.60.40.1120 264 353 7.9E-7 T 13-10-2018 VEA_001078 34f74f56245fe93251a3caed45e8042a 748 SUPERFAMILY SSF49464 264 349 3.81E-7 T 13-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily VEA_001078 34f74f56245fe93251a3caed45e8042a 748 Pfam PF13620 Carboxypeptidase regulatory-like domain 264 340 1.1E-7 T 13-10-2018 VEA_001078 34f74f56245fe93251a3caed45e8042a 748 Gene3D G3DSA:3.20.20.140 427 659 1.1E-24 T 13-10-2018 VEA_001824 cecab3a3d784965fc9cc31c8e0407d5b 196 SUPERFAMILY SSF46689 5 78 1.07E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_001824 cecab3a3d784965fc9cc31c8e0407d5b 196 SUPERFAMILY SSF48498 81 191 3.2E-11 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VEA_001824 cecab3a3d784965fc9cc31c8e0407d5b 196 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 196 41.246 T 13-10-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 VEA_001824 cecab3a3d784965fc9cc31c8e0407d5b 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 58 1.5E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VEA_001824 cecab3a3d784965fc9cc31c8e0407d5b 196 Gene3D G3DSA:1.10.357.10 3 196 5.3E-78 T 13-10-2018 VEA_002208 769cd2c03bfd7c6ee26ecf5cd3040e9b 87 Pfam PF13937 Domain of unknown function (DUF4212) 9 86 8.5E-34 T 13-10-2018 IPR019886 Sodium symporter small subunit, predicted VEA_002208 769cd2c03bfd7c6ee26ecf5cd3040e9b 87 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 11 87 2.2E-35 T 13-10-2018 IPR019886 Sodium symporter small subunit, predicted VEA_003033 69bba96086c9ab473cea768491386d37 376 Pfam PF03916 Polysulphide reductase, NrfD 9 317 1.6E-18 T 13-10-2018 IPR005614 NrfD family VEA_003382 dbc87ebacebabbba11e10cbd100ca9e2 508 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 18 444 1.4E-140 T 13-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane VEA_002866 b72ea335fba9bc0416b4f969c266a74d 176 Pfam PF04315 Elongation factor P hydroxylase 11 172 4.1E-73 T 13-10-2018 IPR007411 Elongation factor P hydroxylase VEA_000846 47ec5b79af15a8ea507744031c6354f6 184 Pfam PF01618 MotA/TolQ/ExbB proton channel family 73 177 1.8E-22 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VEA_001520 48e7543f3c9da8b9ef6954897a5bcb7f 226 Pfam PF01575 MaoC like domain 83 201 4.7E-22 T 13-10-2018 IPR002539 MaoC-like dehydratase domain VEA_001520 48e7543f3c9da8b9ef6954897a5bcb7f 226 SUPERFAMILY SSF54637 76 221 9.22E-30 T 13-10-2018 IPR029069 HotDog domain superfamily VEA_001520 48e7543f3c9da8b9ef6954897a5bcb7f 226 Gene3D G3DSA:3.10.129.10 75 225 7.2E-36 T 13-10-2018 VEA_003084 48476da5d5549c42129ac486068a10ee 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 13-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VEA_003084 48476da5d5549c42129ac486068a10ee 396 PIRSF PIRSF001413 1 395 4.9E-168 T 13-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VEA_003084 48476da5d5549c42129ac486068a10ee 396 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 6 388 2.8E-194 T 13-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VEA_003084 48476da5d5549c42129ac486068a10ee 396 Gene3D G3DSA:3.40.50.1100 9 204 1.3E-183 T 13-10-2018 VEA_003084 48476da5d5549c42129ac486068a10ee 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 373 4.4E-49 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VEA_003084 48476da5d5549c42129ac486068a10ee 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 50.044 T 13-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VEA_003084 48476da5d5549c42129ac486068a10ee 396 SUPERFAMILY SSF53686 5 387 2.88E-141 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VEA_003084 48476da5d5549c42129ac486068a10ee 396 Gene3D G3DSA:3.40.50.1100 53 383 1.3E-183 T 13-10-2018 VEA_003380 f421c9df0ced3103fc3a0e3e0b0de7c6 256 Pfam PF01925 Sulfite exporter TauE/SafE 8 249 4.1E-38 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VEA_001274 22ecdb641d7704804998eb431e3ec470 66 SUPERFAMILY SSF116734 10 51 8.01E-5 T 13-10-2018 VEA_001690 c074715a6f60ff81b8ef473f8b0268f7 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 13-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 VEA_001690 c074715a6f60ff81b8ef473f8b0268f7 176 Pfam PF00719 Inorganic pyrophosphatase 18 173 2.1E-51 T 13-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 VEA_001690 c074715a6f60ff81b8ef473f8b0268f7 176 SUPERFAMILY SSF50324 3 175 2.88E-64 T 13-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 VEA_001690 c074715a6f60ff81b8ef473f8b0268f7 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 35.545 T 13-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 VEA_001690 c074715a6f60ff81b8ef473f8b0268f7 176 Gene3D G3DSA:3.90.80.10 1 175 9.4E-67 T 13-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 VEA_000923 50792f1ef1ec4f42944109b84c19d011 253 Gene3D G3DSA:3.40.50.720 1 253 1.0E-82 T 13-10-2018 VEA_000923 50792f1ef1ec4f42944109b84c19d011 253 SUPERFAMILY SSF51735 6 252 1.76E-77 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_000923 50792f1ef1ec4f42944109b84c19d011 253 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 6 253 6.5E-134 T 13-10-2018 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.127|MetaCyc: PWY-6507|MetaCyc: PWY-7562 VEA_000923 50792f1ef1ec4f42944109b84c19d011 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 8.4E-14 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000923 50792f1ef1ec4f42944109b84c19d011 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 8.4E-14 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000923 50792f1ef1ec4f42944109b84c19d011 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 8.4E-14 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000923 50792f1ef1ec4f42944109b84c19d011 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VEA_000923 50792f1ef1ec4f42944109b84c19d011 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 1.6E-41 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000923 50792f1ef1ec4f42944109b84c19d011 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.6E-41 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000923 50792f1ef1ec4f42944109b84c19d011 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.6E-41 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000923 50792f1ef1ec4f42944109b84c19d011 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.6E-41 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000923 50792f1ef1ec4f42944109b84c19d011 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.6E-41 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000923 50792f1ef1ec4f42944109b84c19d011 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.6E-41 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VEA_000923 50792f1ef1ec4f42944109b84c19d011 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 250 1.5E-60 T 13-10-2018 VEA_003791 feb65cb7b4d98f58cd106bc792033253 82 Pfam PF06945 Protein of unknown function (DUF1289) 11 56 1.1E-17 T 13-10-2018 IPR010710 Protein of unknown function DUF1289 VEA_002991 68f1ef6eb4be1754f346b6cf7ff808f1 174 Pfam PF02620 Uncharacterized ACR, COG1399 62 173 1.1E-15 T 13-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD VEA_003251 118838d26226bc84f69b485fb2b2fd36 280 Gene3D G3DSA:1.10.150.130 189 275 1.7E-5 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal VEA_000215 c61f1eb9c618be8c2db9ed396f5e5f7d 265 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 59 153 1.1E-25 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VEA_000215 c61f1eb9c618be8c2db9ed396f5e5f7d 265 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 258 2.8E-21 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_000215 c61f1eb9c618be8c2db9ed396f5e5f7d 265 SUPERFAMILY SSF161098 60 245 2.62E-45 T 13-10-2018 IPR035906 MetI-like superfamily VEA_000215 c61f1eb9c618be8c2db9ed396f5e5f7d 265 Gene3D G3DSA:1.10.3720.10 50 260 1.1E-53 T 13-10-2018 IPR035906 MetI-like superfamily VEA_001440 58a7474cc143584af81a7a2992aa4a24 236 Pfam PF03591 AzlC protein 25 163 4.2E-35 T 13-10-2018 IPR011606 Branched-chain amino acid transport, permease VEA_000254 267e4e2b0488eea46582dfdec2078886 156 SUPERFAMILY SSF52540 3 112 4.32E-9 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000254 267e4e2b0488eea46582dfdec2078886 156 Pfam PF13521 AAA domain 5 113 6.1E-23 T 13-10-2018 IPR038727 NadR/Ttd14, AAA domain VEA_001707 573e0961cd99316dde1a879b6c444a96 302 SUPERFAMILY SSF52402 6 209 5.82E-74 T 13-10-2018 VEA_001707 573e0961cd99316dde1a879b6c444a96 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 1.0E-163 T 13-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 VEA_001707 573e0961cd99316dde1a879b6c444a96 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 58.224 T 13-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 VEA_001707 573e0961cd99316dde1a879b6c444a96 302 PIRSF PIRSF002936 1 302 8.4E-156 T 13-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 VEA_001707 573e0961cd99316dde1a879b6c444a96 302 Gene3D G3DSA:3.40.50.620 7 212 1.4E-65 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_001707 573e0961cd99316dde1a879b6c444a96 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 1.3E-63 T 13-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 VEA_002010 341c77b492484548eddec1f04c33b175 248 SUPERFAMILY SSF53850 1 246 2.93E-59 T 13-10-2018 VEA_002010 341c77b492484548eddec1f04c33b175 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 243 7.4E-57 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEA_002010 341c77b492484548eddec1f04c33b175 248 Gene3D G3DSA:3.40.190.10 95 204 6.1E-30 T 13-10-2018 VEA_002010 341c77b492484548eddec1f04c33b175 248 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 46 59 - T 13-10-2018 IPR018313 Solute-binding protein family 3, conserved site VEA_002010 341c77b492484548eddec1f04c33b175 248 SMART SM00062 24 245 6.0E-76 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VEA_002010 341c77b492484548eddec1f04c33b175 248 SMART SM00079 24 244 0.0065 T 13-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 VEA_003522 c5ccb96f2d1e84d40dfde27878226057 64 Pfam PF14255 Cysteine-rich CPXCG 9 59 2.4E-21 T 13-10-2018 IPR025990 Cysteine-rich CPXCG protein VEA_003522 c5ccb96f2d1e84d40dfde27878226057 64 PIRSF PIRSF037225 1 64 5.3E-24 T 13-10-2018 IPR017143 Uncharacterised conserved protein UCP037225 VEA_004269 302bbf5703e37c9beeafedb2b9e0c67e 129 Gene3D G3DSA:3.30.310.230 2 128 7.9E-46 T 13-10-2018 IPR038208 Sigma factor-binding protein Crl superfamily GO:0045893 VEA_004269 302bbf5703e37c9beeafedb2b9e0c67e 129 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 4 129 31.564 T 13-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 VEA_004269 302bbf5703e37c9beeafedb2b9e0c67e 129 Pfam PF07417 Transcriptional regulator Crl 6 123 5.0E-50 T 13-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 VEA_002382 787f9512223a63423c288d213d64bcbd 1508 SUPERFAMILY SSF49899 518 781 1.77E-26 T 13-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily VEA_002382 787f9512223a63423c288d213d64bcbd 1508 Gene3D G3DSA:2.60.120.200 513 783 4.1E-5 T 13-10-2018 VEA_003258 06aa4ab4db2c54de378a845654719b5f 236 Pfam PF02810 SEC-C motif 216 234 8.4E-7 T 13-10-2018 IPR004027 SEC-C motif VEA_003258 06aa4ab4db2c54de378a845654719b5f 236 Gene3D G3DSA:3.10.450.50 183 235 4.8E-6 T 13-10-2018 VEA_003258 06aa4ab4db2c54de378a845654719b5f 236 SUPERFAMILY SSF103642 213 234 1.8E-6 T 13-10-2018 VEA_000940 712779cc7720ea78e30d9ca78a37b417 446 Pfam PF01554 MatE 247 404 2.6E-22 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEA_000940 712779cc7720ea78e30d9ca78a37b417 446 Pfam PF01554 MatE 19 179 2.4E-25 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEA_000940 712779cc7720ea78e30d9ca78a37b417 446 PIRSF PIRSF006603 2 446 1.3E-67 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEA_000940 712779cc7720ea78e30d9ca78a37b417 446 TIGRFAM TIGR00797 matE: MATE efflux family protein 19 417 4.1E-58 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEA_002234 e315e16ffd44f42870362efc7647f4be 125 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 7 125 24.692 T 13-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 VEA_002234 e315e16ffd44f42870362efc7647f4be 125 PIRSF PIRSF000179 6 125 9.9E-56 T 13-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 VEA_002234 e315e16ffd44f42870362efc7647f4be 125 SUPERFAMILY SSF81343 7 125 1.57E-50 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEA_002234 e315e16ffd44f42870362efc7647f4be 125 Gene3D G3DSA:1.20.1300.10 6 125 1.6E-44 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VEA_002234 e315e16ffd44f42870362efc7647f4be 125 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 11 125 9.0E-49 T 13-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 VEA_002234 e315e16ffd44f42870362efc7647f4be 125 Pfam PF02313 Fumarate reductase subunit D 11 123 2.5E-44 T 13-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 VEA_001607 0dbe67df5683ba32b0e0fe0dc6ff4c56 449 Gene3D G3DSA:3.40.190.10 29 427 3.2E-141 T 13-10-2018 VEA_001607 0dbe67df5683ba32b0e0fe0dc6ff4c56 449 Gene3D G3DSA:3.40.190.10 114 432 3.2E-141 T 13-10-2018 VEA_001607 0dbe67df5683ba32b0e0fe0dc6ff4c56 449 Pfam PF13379 NMT1-like family 23 303 1.2E-105 T 13-10-2018 VEA_001607 0dbe67df5683ba32b0e0fe0dc6ff4c56 449 SUPERFAMILY SSF53850 29 329 8.03E-20 T 13-10-2018 VEA_002436 8de17f55d9d3744ad9035ea8f3a7a6ec 444 Pfam PF02378 Phosphotransferase system, EIIC 32 351 6.0E-64 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VEA_002436 8de17f55d9d3744ad9035ea8f3a7a6ec 444 PIRSF PIRSF006351 4 434 8.8E-145 T 13-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 VEA_002436 8de17f55d9d3744ad9035ea8f3a7a6ec 444 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 16 424 2.6E-112 T 13-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 VEA_004443 4c20cfa0190304d6aac854a745e613b6 436 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 413 3.4E-133 T 13-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 VEA_004443 4c20cfa0190304d6aac854a745e613b6 436 Pfam PF05525 Branched-chain amino acid transport protein 8 426 9.0E-151 T 13-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 VEA_004216 ccd0027e5d2a39b78fc1953049625f18 156 Pfam PF07295 Zinc-ribbon containing domain 14 152 7.8E-48 T 13-10-2018 IPR009912 Zinc-ribbon containing domain VEA_001031 2f9b50564b5cf404895140e927b7ff4c 116 Gene3D G3DSA:2.40.100.20 1 115 7.5E-14 T 13-10-2018 VEA_001031 2f9b50564b5cf404895140e927b7ff4c 116 SUPERFAMILY SSF50891 2 114 2.35E-26 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily VEA_001797 6001dff40942a1f6ef671c67ef2b53d6 230 SUPERFAMILY SSF53448 5 229 5.39E-60 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEA_001797 6001dff40942a1f6ef671c67ef2b53d6 230 Pfam PF02348 Cytidylyltransferase 8 136 4.5E-29 T 13-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 VEA_001797 6001dff40942a1f6ef671c67ef2b53d6 230 Gene3D G3DSA:3.90.550.10 3 229 1.5E-74 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VEA_003318 1ae8dfd187df4c3f2c7f102c5383db57 471 Gene3D G3DSA:1.20.1600.10 23 458 4.1E-64 T 13-10-2018 VEA_003318 1ae8dfd187df4c3f2c7f102c5383db57 471 SUPERFAMILY SSF56954 3 446 2.49E-68 T 13-10-2018 VEA_003318 1ae8dfd187df4c3f2c7f102c5383db57 471 Pfam PF02321 Outer membrane efflux protein 28 243 8.7E-25 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VEA_003318 1ae8dfd187df4c3f2c7f102c5383db57 471 Pfam PF02321 Outer membrane efflux protein 267 446 3.7E-24 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VEA_003343 3a15ce773e06d847a41366dbdea10b5f 114 TIGRFAM TIGR02497 yscI_hrpB_dom: type III secretion apparatus protein, YscI/HrpB, C-terminal domain 76 114 6.6E-14 T 13-10-2018 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 VEA_003343 3a15ce773e06d847a41366dbdea10b5f 114 Pfam PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI 27 114 1.1E-28 T 13-10-2018 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 VEA_000268 534dc3d1c3334c9a1b4c1b17953c2bd8 159 Gene3D G3DSA:3.90.960.10 3 150 8.7E-40 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VEA_000268 534dc3d1c3334c9a1b4c1b17953c2bd8 159 SUPERFAMILY SSF55826 5 147 4.84E-30 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VEA_000268 534dc3d1c3334c9a1b4c1b17953c2bd8 159 Pfam PF04073 Aminoacyl-tRNA editing domain 34 141 8.0E-19 T 13-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VEA_002117 71863908c8ee00f2d6368c0fff5425df 201 SMART SM01144 1 192 8.4E-59 T 13-10-2018 IPR005636 DTW VEA_002117 71863908c8ee00f2d6368c0fff5425df 201 Pfam PF03942 DTW domain 5 183 4.5E-46 T 13-10-2018 IPR005636 DTW VEA_001431 acdd4ffa619ce14f189af9aabb0df40c 397 SUPERFAMILY SSF103473 4 384 8.37E-56 T 13-10-2018 IPR036259 MFS transporter superfamily VEA_001431 acdd4ffa619ce14f189af9aabb0df40c 397 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 6 367 1.6E-60 T 13-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 VEA_001431 acdd4ffa619ce14f189af9aabb0df40c 397 Pfam PF07690 Major Facilitator Superfamily 17 349 4.0E-44 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEA_001431 acdd4ffa619ce14f189af9aabb0df40c 397 Gene3D G3DSA:1.20.1720.10 6 381 1.2E-84 T 13-10-2018 VEA_000383 ed7dafa779082d7346ebacac64eab4c6 228 Gene3D G3DSA:3.40.190.10 68 167 1.2E-22 T 13-10-2018 VEA_000383 ed7dafa779082d7346ebacac64eab4c6 228 Gene3D G3DSA:3.40.190.10 2 199 1.2E-22 T 13-10-2018 VEA_000383 ed7dafa779082d7346ebacac64eab4c6 228 SUPERFAMILY SSF53850 3 202 4.66E-15 T 13-10-2018 VEA_000383 ed7dafa779082d7346ebacac64eab4c6 228 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 2 218 1.6E-39 T 13-10-2018 VEA_004223 9fe19e0f86d588d8e1a649952fd49cf1 373 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 367 2.2E-134 T 13-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEA_004223 9fe19e0f86d588d8e1a649952fd49cf1 373 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 16 369 28.117 T 13-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEA_004223 9fe19e0f86d588d8e1a649952fd49cf1 373 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 324 348 - T 13-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEA_004223 9fe19e0f86d588d8e1a649952fd49cf1 373 Pfam PF01098 Cell cycle protein 24 367 2.2E-112 T 13-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VEA_002040 54e9d68dc2194d6b05c0ca53be3280b5 94 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 3 73 1.0E-4 T 13-10-2018 VEA_002040 54e9d68dc2194d6b05c0ca53be3280b5 94 Pfam PF13710 ACT domain 12 73 3.1E-21 T 13-10-2018 VEA_002040 54e9d68dc2194d6b05c0ca53be3280b5 94 Gene3D G3DSA:3.30.70.260 1 89 1.3E-12 T 13-10-2018 VEA_002040 54e9d68dc2194d6b05c0ca53be3280b5 94 SUPERFAMILY SSF55021 3 76 1.21E-11 T 13-10-2018 VEA_000461 017e679dee6560112d1c82bf064212a4 214 SUPERFAMILY SSF51161 41 202 9.98E-43 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily VEA_000461 017e679dee6560112d1c82bf064212a4 214 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 118 146 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VEA_000461 017e679dee6560112d1c82bf064212a4 214 Gene3D G3DSA:2.160.10.10 2 209 4.1E-58 T 13-10-2018 VEA_000461 017e679dee6560112d1c82bf064212a4 214 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 144 1.4E-10 T 13-10-2018 IPR001451 Hexapeptide repeat VEA_001856 4409a5637a5f165b033d18d8cc2adc8d 254 Pfam PF11932 Protein of unknown function (DUF3450) 11 249 6.1E-89 T 13-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 VEA_001856 4409a5637a5f165b033d18d8cc2adc8d 254 PIRSF PIRSF028069 4 254 1.9E-96 T 13-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 VEA_000884 0dee7daa1d1e76f64d6446256abafc1c 380 SUPERFAMILY SSF46689 323 352 4.44E-7 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VEA_000884 0dee7daa1d1e76f64d6446256abafc1c 380 Pfam PF05651 Putative sugar diacid recognition 4 137 2.5E-51 T 13-10-2018 IPR008599 Putative sugar diacid recognition VEA_000884 0dee7daa1d1e76f64d6446256abafc1c 380 Gene3D G3DSA:1.10.10.2840 252 380 6.7E-22 T 13-10-2018 VEA_000884 0dee7daa1d1e76f64d6446256abafc1c 380 Pfam PF13556 PucR C-terminal helix-turn-helix domain 318 375 6.4E-21 T 13-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain VEA_001511 de5f7458adb2b77240daf3dbf6e6c651 484 SMART SM00382 279 480 2.8E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_001511 de5f7458adb2b77240daf3dbf6e6c651 484 SUPERFAMILY SSF52540 41 208 5.43E-25 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001511 de5f7458adb2b77240daf3dbf6e6c651 484 Pfam PF00005 ABC transporter 271 422 1.3E-21 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_001511 de5f7458adb2b77240daf3dbf6e6c651 484 Gene3D G3DSA:3.40.50.300 21 236 9.3E-25 T 13-10-2018 VEA_001511 de5f7458adb2b77240daf3dbf6e6c651 484 Gene3D G3DSA:3.40.50.300 237 467 2.3E-41 T 13-10-2018 VEA_001511 de5f7458adb2b77240daf3dbf6e6c651 484 SUPERFAMILY SSF52540 235 456 1.82E-34 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001511 de5f7458adb2b77240daf3dbf6e6c651 484 Pfam PF00005 ABC transporter 41 159 2.8E-11 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_003214 a315aa9042bf3c6de0519bfedf12a60a 271 Pfam PF11185 Protein of unknown function (DUF2971) 113 205 1.3E-12 T 13-10-2018 IPR021352 Protein of unknown function DUF2971 VEA_001684 ff2dd2ea1bb9e1be51542ccaeebe5d9c 234 Pfam PF00005 ABC transporter 18 157 3.8E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_001684 ff2dd2ea1bb9e1be51542ccaeebe5d9c 234 Gene3D G3DSA:3.40.50.300 1 233 1.5E-61 T 13-10-2018 VEA_001684 ff2dd2ea1bb9e1be51542ccaeebe5d9c 234 SUPERFAMILY SSF52540 1 231 1.45E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001684 ff2dd2ea1bb9e1be51542ccaeebe5d9c 234 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_001684 ff2dd2ea1bb9e1be51542ccaeebe5d9c 234 SMART SM00382 24 209 3.0E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_001684 ff2dd2ea1bb9e1be51542ccaeebe5d9c 234 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 211 8.2E-103 T 13-10-2018 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0016021|GO:0042626|GO:0071934 VEA_001567 d1b5943790ae8c524e2eba28cae6526a 243 Pfam PF12525 Protein of unknown function (DUF3726) 3 78 5.9E-28 T 13-10-2018 IPR022201 Protein of unknown function DUF3726 VEA_000181 bc9f11a5d87b02abcdfdb1142fa1bcab 262 Gene3D G3DSA:3.30.2010.10 53 139 3.4E-7 T 13-10-2018 VEA_000181 bc9f11a5d87b02abcdfdb1142fa1bcab 262 Pfam PF01435 Peptidase family M48 61 246 4.0E-46 T 13-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 VEA_000023 7a6fbb3eaa2ad99f33fec528a246f1c5 264 Gene3D G3DSA:1.25.40.10 1 86 5.3E-17 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_000023 7a6fbb3eaa2ad99f33fec528a246f1c5 264 SUPERFAMILY SSF144059 3 257 4.18E-85 T 13-10-2018 VEA_000023 7a6fbb3eaa2ad99f33fec528a246f1c5 264 Pfam PF07024 ImpE protein 138 257 4.5E-35 T 13-10-2018 IPR009211 Predicted virulence protein, SciE type VEA_000023 7a6fbb3eaa2ad99f33fec528a246f1c5 264 PIRSF PIRSF029288 1 262 6.0E-87 T 13-10-2018 IPR009211 Predicted virulence protein, SciE type VEA_003901 c64a01e28a90e7e9122cc90769564770 276 SUPERFAMILY SSF110849 42 105 9.94E-7 T 13-10-2018 IPR036086 ParB/Sulfiredoxin superfamily VEA_001424 dbb76d39bb16f93487109d08b1bbf5a0 438 Pfam PF07670 Nucleoside recognition 124 217 1.6E-7 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VEA_000909 402b311dc04e2833f97eeff5c4b0e0af 194 Pfam PF01810 LysE type translocator 17 188 6.3E-16 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEA_003357 b0e5bda37ac2751a5a9bf67f6266e275 510 Gene3D G3DSA:1.20.1250.20 190 429 9.5E-7 T 13-10-2018 VEA_003357 b0e5bda37ac2751a5a9bf67f6266e275 510 SUPERFAMILY SSF103473 4 192 3.14E-12 T 13-10-2018 IPR036259 MFS transporter superfamily VEA_003357 b0e5bda37ac2751a5a9bf67f6266e275 510 SUPERFAMILY SSF103473 201 424 1.12E-7 T 13-10-2018 IPR036259 MFS transporter superfamily VEA_003357 b0e5bda37ac2751a5a9bf67f6266e275 510 Gene3D G3DSA:1.20.1250.20 3 188 4.2E-9 T 13-10-2018 VEA_001198 ccf7d3b68eb138b97a96f7605e3afa87 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 124 1.1E-20 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VEA_001198 ccf7d3b68eb138b97a96f7605e3afa87 127 Gene3D G3DSA:3.10.180.10 7 125 6.6E-33 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEA_001198 ccf7d3b68eb138b97a96f7605e3afa87 127 SUPERFAMILY SSF54593 1 127 1.14E-32 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEA_003105 be1df5ab8ee029361ee3989c5cdecbd9 326 Pfam PF13084 Domain of unknown function (DUF3943) 163 272 6.9E-38 T 13-10-2018 IPR025079 Domain of unknown function DUF3943 VEA_000106 b792941603fa3fc5717fd61e53c85d53 288 Gene3D G3DSA:3.60.10.10 15 286 6.8E-29 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VEA_000106 b792941603fa3fc5717fd61e53c85d53 288 SUPERFAMILY SSF56219 15 287 1.7E-28 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VEA_000106 b792941603fa3fc5717fd61e53c85d53 288 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 26 278 1.2E-8 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VEA_003386 d6f8b0427ac636ba17aca132a4831fcc 94 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 8 66 5.3E-7 T 13-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 VEA_003386 d6f8b0427ac636ba17aca132a4831fcc 94 SUPERFAMILY SSF51316 5 81 6.59E-17 T 13-10-2018 IPR011057 Mss4-like superfamily VEA_002818 0a31cc87ed8306f09946eb9ee7859227 439 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 348 357 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEA_002818 0a31cc87ed8306f09946eb9ee7859227 439 Gene3D G3DSA:3.40.50.12240 17 439 2.3E-156 T 13-10-2018 VEA_002818 0a31cc87ed8306f09946eb9ee7859227 439 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 21 437 2.0E-174 T 13-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEA_002818 0a31cc87ed8306f09946eb9ee7859227 439 SMART SM00382 158 342 5.3E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_002818 0a31cc87ed8306f09946eb9ee7859227 439 SUPERFAMILY SSF52540 93 362 1.12E-95 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_002818 0a31cc87ed8306f09946eb9ee7859227 439 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 146 357 2.1E-73 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEA_002818 0a31cc87ed8306f09946eb9ee7859227 439 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 24 435 3.0E-194 T 13-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VEA_001973 604ca3b0b293e10b11a134db3d060967 310 SUPERFAMILY SSF161098 75 287 1.0E-17 T 13-10-2018 IPR035906 MetI-like superfamily VEA_001973 604ca3b0b293e10b11a134db3d060967 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 303 5.9E-40 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_001973 604ca3b0b293e10b11a134db3d060967 310 Gene3D G3DSA:1.10.3720.10 69 299 3.8E-20 T 13-10-2018 IPR035906 MetI-like superfamily VEA_000566 00013a087d2e6efeb2b18f441cef78e9 412 Gene3D G3DSA:1.10.4160.10 4 410 4.5E-45 T 13-10-2018 IPR038271 Purine-cytosine permease superfamily VEA_000566 00013a087d2e6efeb2b18f441cef78e9 412 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 11 397 3.1E-62 T 13-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 VEA_000733 ed92ea1f384e7d316f8e0f529723d785 370 Pfam PF02119 Flagellar P-ring protein 28 369 3.1E-135 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VEA_000733 ed92ea1f384e7d316f8e0f529723d785 370 PRINTS PR01010 Flagellar P-ring protein signature 87 106 1.2E-76 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VEA_000733 ed92ea1f384e7d316f8e0f529723d785 370 PRINTS PR01010 Flagellar P-ring protein signature 27 42 1.2E-76 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VEA_000733 ed92ea1f384e7d316f8e0f529723d785 370 PRINTS PR01010 Flagellar P-ring protein signature 42 57 1.2E-76 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VEA_000733 ed92ea1f384e7d316f8e0f529723d785 370 PRINTS PR01010 Flagellar P-ring protein signature 193 211 1.2E-76 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VEA_000733 ed92ea1f384e7d316f8e0f529723d785 370 PRINTS PR01010 Flagellar P-ring protein signature 126 144 1.2E-76 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VEA_000733 ed92ea1f384e7d316f8e0f529723d785 370 PRINTS PR01010 Flagellar P-ring protein signature 109 126 1.2E-76 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VEA_000733 ed92ea1f384e7d316f8e0f529723d785 370 PRINTS PR01010 Flagellar P-ring protein signature 61 76 1.2E-76 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VEA_000733 ed92ea1f384e7d316f8e0f529723d785 370 PRINTS PR01010 Flagellar P-ring protein signature 167 185 1.2E-76 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VEA_000733 ed92ea1f384e7d316f8e0f529723d785 370 PRINTS PR01010 Flagellar P-ring protein signature 257 269 1.2E-76 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VEA_000733 ed92ea1f384e7d316f8e0f529723d785 370 Hamap MF_00416 Flagellar P-ring protein [flgI]. 3 370 36.675 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VEA_002751 dbe9cd2c5baa32d1ca33dbafd22d3fd6 256 Pfam PF01148 Cytidylyltransferase family 3 256 9.3E-67 T 13-10-2018 VEA_002751 dbe9cd2c5baa32d1ca33dbafd22d3fd6 256 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 214 240 - T 13-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 VEA_004504 b485b41b8cadf564e32becf1f29aad13 221 SMART SM00749 48 111 8.6 T 13-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria VEA_004504 b485b41b8cadf564e32becf1f29aad13 221 SMART SM00749 125 188 4.1E-4 T 13-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria VEA_004504 b485b41b8cadf564e32becf1f29aad13 221 Pfam PF04972 BON domain 120 185 1.3E-17 T 13-10-2018 IPR007055 BON domain VEA_004504 b485b41b8cadf564e32becf1f29aad13 221 Pfam PF04972 BON domain 44 110 1.1E-11 T 13-10-2018 IPR007055 BON domain VEA_003374 4b029a1f4ae1f242925834737b95a401 94 TIGRFAM TIGR02573 LcrG_PcrG: type III secretion protein LcrG 2 94 7.0E-36 T 13-10-2018 IPR009863 Type III secretion protein, LcrG VEA_003374 4b029a1f4ae1f242925834737b95a401 94 Pfam PF07216 LcrG protein 1 94 2.2E-35 T 13-10-2018 IPR009863 Type III secretion protein, LcrG VEA_003374 4b029a1f4ae1f242925834737b95a401 94 ProDom PD020116 PLASMID ACRG TYPE III G SECRETION REGULATOR LCRG LOCUS RESPONSE 2 94 2.0E-27 T 13-10-2018 IPR009863 Type III secretion protein, LcrG VEA_000888 8832246e328c835770f25edd3e6595c1 178 Gene3D G3DSA:1.20.58.320 1 77 2.2E-26 T 13-10-2018 VEA_000888 8832246e328c835770f25edd3e6595c1 178 Pfam PF06041 Bacterial protein of unknown function (DUF924) 5 175 3.9E-62 T 13-10-2018 IPR010323 Protein of unknown function DUF924 VEA_000888 8832246e328c835770f25edd3e6595c1 178 SUPERFAMILY SSF48452 2 174 1.44E-66 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_000888 8832246e328c835770f25edd3e6595c1 178 Gene3D G3DSA:1.25.40.10 78 178 3.5E-32 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_000590 b5a63ec2a656f94827ee2cc2e6af7295 69 PIRSF PIRSF002599 1 69 2.3E-24 T 13-10-2018 IPR012156 Cold shock, CspA GO:0003676 VEA_000590 b5a63ec2a656f94827ee2cc2e6af7295 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 1.4E-28 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEA_000590 b5a63ec2a656f94827ee2cc2e6af7295 69 SUPERFAMILY SSF50249 3 68 1.41E-24 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_000590 b5a63ec2a656f94827ee2cc2e6af7295 69 SMART SM00357 5 69 1.2E-28 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 VEA_000590 b5a63ec2a656f94827ee2cc2e6af7295 69 PRINTS PR00050 Cold shock protein signature 27 36 2.9E-17 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEA_000590 b5a63ec2a656f94827ee2cc2e6af7295 69 PRINTS PR00050 Cold shock protein signature 42 60 2.9E-17 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEA_000590 b5a63ec2a656f94827ee2cc2e6af7295 69 PRINTS PR00050 Cold shock protein signature 6 21 2.9E-17 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VEA_000590 b5a63ec2a656f94827ee2cc2e6af7295 69 Gene3D G3DSA:2.40.50.140 1 68 5.0E-29 T 13-10-2018 VEA_000083 e716a9818297be388acdb5af7cdabedf 144 Gene3D G3DSA:3.40.30.10 41 144 4.8E-32 T 13-10-2018 VEA_000083 e716a9818297be388acdb5af7cdabedf 144 Gene3D G3DSA:2.20.28.140 2 37 1.4E-13 T 13-10-2018 VEA_000083 e716a9818297be388acdb5af7cdabedf 144 Pfam PF00085 Thioredoxin 43 140 1.5E-27 T 13-10-2018 IPR013766 Thioredoxin domain GO:0045454 VEA_000083 e716a9818297be388acdb5af7cdabedf 144 PIRSF PIRSF000077 38 142 5.6E-32 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VEA_000083 e716a9818297be388acdb5af7cdabedf 144 TIGRFAM TIGR01068 thioredoxin: thioredoxin 46 141 1.8E-34 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VEA_000083 e716a9818297be388acdb5af7cdabedf 144 SUPERFAMILY SSF52833 28 143 6.02E-37 T 13-10-2018 IPR036249 Thioredoxin-like superfamily VEA_000083 e716a9818297be388acdb5af7cdabedf 144 PRINTS PR00421 Thioredoxin family signature 106 117 5.0E-8 T 13-10-2018 VEA_000083 e716a9818297be388acdb5af7cdabedf 144 PRINTS PR00421 Thioredoxin family signature 58 66 5.0E-8 T 13-10-2018 VEA_000083 e716a9818297be388acdb5af7cdabedf 144 PRINTS PR00421 Thioredoxin family signature 66 75 5.0E-8 T 13-10-2018 VEA_002800 24796afa74db1ccff140c92270490109 93 Pfam PF13698 Domain of unknown function (DUF4156) 7 91 1.5E-24 T 13-10-2018 IPR025294 Protein of unknown function DUF4156 VEA_004189 29d45345179fe47783305f1feac8c6b7 149 Pfam PF04214 Protein of unknown function, DUF 48 118 5.3E-30 T 13-10-2018 IPR007332 Protein of unknown function DUF411 VEA_000173 d8736020830a2144d4651fe9619fe57a 279 SUPERFAMILY SSF51197 7 276 2.88E-60 T 13-10-2018 VEA_000173 d8736020830a2144d4651fe9619fe57a 279 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 11 94 8.1E-10 T 13-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain VEA_000173 d8736020830a2144d4651fe9619fe57a 279 Gene3D G3DSA:2.60.120.330 1 279 2.6E-96 T 13-10-2018 IPR027443 Isopenicillin N synthase-like VEA_000173 d8736020830a2144d4651fe9619fe57a 279 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 152 253 2.2E-15 T 13-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 VEA_000704 cbdb9f095b76842c938fb839bf7d7871 146 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 6 125 5.2E-31 T 13-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 VEA_000704 cbdb9f095b76842c938fb839bf7d7871 146 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 144 7.0E-32 T 13-10-2018 IPR002178 PTS EIIA type-2 domain VEA_000704 cbdb9f095b76842c938fb839bf7d7871 146 SUPERFAMILY SSF55804 1 144 3.01E-30 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VEA_000704 cbdb9f095b76842c938fb839bf7d7871 146 Gene3D G3DSA:3.40.930.10 1 145 5.4E-32 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VEA_002699 1e0b406cc2b2fc066979bf142bb7ab85 442 Pfam PF14344 Domain of unknown function (DUF4397) 21 143 6.8E-17 T 13-10-2018 IPR025510 Domain of unknown function DUF4397 VEA_002699 1e0b406cc2b2fc066979bf142bb7ab85 442 Pfam PF14344 Domain of unknown function (DUF4397) 237 359 7.5E-18 T 13-10-2018 IPR025510 Domain of unknown function DUF4397 VEA_002699 1e0b406cc2b2fc066979bf142bb7ab85 442 Pfam PF14344 Domain of unknown function (DUF4397) 128 215 1.7E-11 T 13-10-2018 IPR025510 Domain of unknown function DUF4397 VEA_003315 6761b97d3a0bcc775855950a7443b8b2 383 Pfam PF12698 ABC-2 family transporter protein 22 367 1.7E-38 T 13-10-2018 VEA_002729 33b45aa498e7bbd45656e552cef68889 528 Pfam PF03806 AbgT putative transporter family 19 526 5.1E-225 T 13-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 VEA_002226 1bde41ca0a166b6bb73828abedf7c912 270 Pfam PF11185 Protein of unknown function (DUF2971) 79 171 4.0E-10 T 13-10-2018 IPR021352 Protein of unknown function DUF2971 VEA_000035 233e7025d08b892d0eca0fe47fef1a53 432 PIRSF PIRSF006066 2 432 2.2E-108 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VEA_000035 233e7025d08b892d0eca0fe47fef1a53 432 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 19 427 1.5E-96 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VEA_000035 233e7025d08b892d0eca0fe47fef1a53 432 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 10 418 2.0E-82 T 13-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VEA_001347 07a0fc919beeb9fe9bc73df1f6c6d830 90 Pfam PF07383 Protein of unknown function (DUF1496) 36 86 1.9E-22 T 13-10-2018 IPR009971 Protein of unknown function DUF1496 VEA_004335 3e5b6fc30770b1e18ad6a211b52d266c 78 TIGRFAM TIGR04359 TrbK_RP4: entry exclusion lipoprotein TrbK 9 77 4.2E-11 T 13-10-2018 IPR027584 Entry exclusion lipoprotein TrbK VEA_001700 e0aedc6e21213b6124f411ce6aee5374 242 Pfam PF00005 ABC transporter 30 185 5.7E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_001700 e0aedc6e21213b6124f411ce6aee5374 242 Gene3D G3DSA:3.40.50.300 6 232 1.6E-52 T 13-10-2018 VEA_001700 e0aedc6e21213b6124f411ce6aee5374 242 SUPERFAMILY SSF52540 5 229 7.99E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001700 e0aedc6e21213b6124f411ce6aee5374 242 SMART SM00382 35 233 5.8E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_004092 d1e295a6138a1f1d861255a96bb5fc90 185 Pfam PF03843 Outer membrane lipoprotein Slp family 17 164 1.2E-44 T 13-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 VEA_004092 d1e295a6138a1f1d861255a96bb5fc90 185 PIRSF PIRSF004982 2 185 2.7E-61 T 13-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 VEA_004092 d1e295a6138a1f1d861255a96bb5fc90 185 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 12 173 8.2E-36 T 13-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 VEA_003184 61d0a1e7b1fc628f8e33d9f45ba7b6da 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 5.6E-16 T 13-10-2018 IPR021681 Protein of unknown function DUF3265 VEA_000807 e0c27f10c36ef5314d5e479212690383 462 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 8 435 1.2E-167 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 VEA_000807 e0c27f10c36ef5314d5e479212690383 462 PIRSF PIRSF006446 1 459 2.2E-205 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 VEA_001352 8f03adda7053d53d0541feb98ed350e5 289 Gene3D G3DSA:3.40.50.1980 150 289 3.4E-43 T 13-10-2018 VEA_001352 8f03adda7053d53d0541feb98ed350e5 289 Gene3D G3DSA:3.40.50.1980 29 149 2.4E-35 T 13-10-2018 VEA_001352 8f03adda7053d53d0541feb98ed350e5 289 Pfam PF01497 Periplasmic binding protein 35 264 7.5E-37 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain VEA_001352 8f03adda7053d53d0541feb98ed350e5 289 SUPERFAMILY SSF53807 33 289 4.71E-50 T 13-10-2018 VEA_000437 7831a113a00048e4754156d0669fbf6f 332 Pfam PF06996 Type VI secretion, TssG 10 317 5.8E-85 T 13-10-2018 IPR010732 Type VI secretion, TssG-like VEA_000437 7831a113a00048e4754156d0669fbf6f 332 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 9 317 7.4E-97 T 13-10-2018 IPR010732 Type VI secretion, TssG-like VEA_003740 f0886ac0fb42ec40822db65a6d3b7729 445 Pfam PF00990 Diguanylate cyclase, GGDEF domain 278 430 5.3E-38 T 13-10-2018 IPR000160 GGDEF domain VEA_003740 f0886ac0fb42ec40822db65a6d3b7729 445 SUPERFAMILY SSF49785 39 215 2.21E-12 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily VEA_003740 f0886ac0fb42ec40822db65a6d3b7729 445 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 276 433 1.6E-41 T 13-10-2018 IPR000160 GGDEF domain VEA_003740 f0886ac0fb42ec40822db65a6d3b7729 445 Gene3D G3DSA:3.30.70.270 264 435 1.0E-47 T 13-10-2018 VEA_003740 f0886ac0fb42ec40822db65a6d3b7729 445 SUPERFAMILY SSF55073 283 433 5.41E-40 T 13-10-2018 IPR029787 Nucleotide cyclase VEA_003740 f0886ac0fb42ec40822db65a6d3b7729 445 SMART SM00267 267 434 9.2E-46 T 13-10-2018 IPR000160 GGDEF domain VEA_002093 3b54e2b5fbc4a1a7a1ecf92ac119f79f 101 Pfam PF12305 Protein of unknown function (DUF3630) 6 98 7.4E-38 T 13-10-2018 IPR022080 Protein of unknown function DUF3630 VEA_004513 bf8fb7673426d01dafb4ef86782382b1 147 PIRSF PIRSF006318 1 136 2.9E-56 T 13-10-2018 IPR009386 Protein of unknown function DUF1043 VEA_004513 bf8fb7673426d01dafb4ef86782382b1 147 Pfam PF06295 Protein of unknown function (DUF1043) 6 129 7.2E-47 T 13-10-2018 IPR009386 Protein of unknown function DUF1043 VEA_001236 936af82304bff762590ed7c29fcab27c 166 Gene3D G3DSA:3.40.630.30 1 164 4.9E-41 T 13-10-2018 VEA_001236 936af82304bff762590ed7c29fcab27c 166 SUPERFAMILY SSF55729 3 161 6.86E-38 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_001236 936af82304bff762590ed7c29fcab27c 166 Pfam PF00583 Acetyltransferase (GNAT) family 39 136 5.8E-17 T 13-10-2018 IPR000182 GNAT domain VEA_001815 56b9b51a23c3f88b84b5cd65194b1472 315 SMART SM00672 57 302 6.1E-6 T 13-10-2018 IPR006598 Lipopolysaccharide-modifying protein VEA_001815 56b9b51a23c3f88b84b5cd65194b1472 315 Pfam PF05686 Glycosyl transferase family 90 137 287 3.8E-18 T 13-10-2018 IPR006598 Lipopolysaccharide-modifying protein VEA_002796 97c4039be45ee180aaefa911100e118d 232 SUPERFAMILY SSF55166 17 176 4.19E-22 T 13-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VEA_002796 97c4039be45ee180aaefa911100e118d 232 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 25 177 1.9E-37 T 13-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 VEA_002796 97c4039be45ee180aaefa911100e118d 232 Gene3D G3DSA:3.30.1380.10 3 188 6.9E-35 T 13-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VEA_001182 7e65b6d866aed879e39cb228e5612949 272 SUPERFAMILY SSF101801 198 262 1.44E-9 T 13-10-2018 IPR036429 SpoA-like superfamily VEA_001182 7e65b6d866aed879e39cb228e5612949 272 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 200 261 4.4E-11 T 13-10-2018 IPR001543 Surface presentation of antigen (SpoA) VEA_003594 bc26b3e5935d728be9266857f8a7fb92 346 Gene3D G3DSA:3.30.360.10 128 329 2.1E-121 T 13-10-2018 VEA_003594 bc26b3e5935d728be9266857f8a7fb92 346 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 196 9.4E-13 T 13-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 VEA_003594 bc26b3e5935d728be9266857f8a7fb92 346 SUPERFAMILY SSF51735 4 204 1.13E-53 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily VEA_003594 bc26b3e5935d728be9266857f8a7fb92 346 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 7 122 3.9E-23 T 13-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 VEA_003594 bc26b3e5935d728be9266857f8a7fb92 346 Gene3D G3DSA:3.40.50.720 6 315 2.1E-121 T 13-10-2018 VEA_002785 65dcc6b52d26d002d37cbb2b2e11d92f 146 Pfam PF09842 Predicted membrane protein (DUF2069) 20 122 1.3E-33 T 13-10-2018 IPR018643 Protein of unknown function DUF2069, membrane VEA_002976 8aea938ee7254da5990cdb9cd8719915 205 SUPERFAMILY SSF103642 182 202 1.57E-7 T 13-10-2018 VEA_002976 8aea938ee7254da5990cdb9cd8719915 205 Pfam PF03695 Uncharacterised protein family (UPF0149) 20 157 5.8E-7 T 13-10-2018 IPR011978 Uncharacterised protein family UPF0149 VEA_002976 8aea938ee7254da5990cdb9cd8719915 205 Pfam PF02810 SEC-C motif 184 202 9.1E-10 T 13-10-2018 IPR004027 SEC-C motif VEA_002976 8aea938ee7254da5990cdb9cd8719915 205 Gene3D G3DSA:3.10.450.50 163 203 9.1E-9 T 13-10-2018 VEA_002775 6b8d0d3a5dc11dd29071c54a4a2aba9d 83 Pfam PF13508 Acetyltransferase (GNAT) domain 4 66 1.3E-9 T 13-10-2018 IPR000182 GNAT domain VEA_002775 6b8d0d3a5dc11dd29071c54a4a2aba9d 83 Gene3D G3DSA:3.40.630.30 1 79 1.1E-17 T 13-10-2018 VEA_002775 6b8d0d3a5dc11dd29071c54a4a2aba9d 83 SUPERFAMILY SSF55729 2 70 1.19E-11 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_001055 cc02ec5491b4ec12a8077d70b20ffd86 214 SUPERFAMILY SSF53335 17 207 3.35E-26 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_001055 cc02ec5491b4ec12a8077d70b20ffd86 214 Gene3D G3DSA:3.40.50.150 13 200 3.0E-25 T 13-10-2018 VEA_001055 cc02ec5491b4ec12a8077d70b20ffd86 214 Pfam PF13847 Methyltransferase domain 50 147 1.0E-14 T 13-10-2018 IPR025714 Methyltransferase domain VEA_002151 a9ca4b199e6cfe1665f1fd2a6adbed29 449 TIGRFAM TIGR00797 matE: MATE efflux family protein 24 418 1.2E-75 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEA_002151 a9ca4b199e6cfe1665f1fd2a6adbed29 449 Pfam PF01554 MatE 24 184 1.2E-24 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEA_002151 a9ca4b199e6cfe1665f1fd2a6adbed29 449 Pfam PF01554 MatE 250 399 1.8E-14 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEA_000761 915c04898bda7079d6310bb7c8313988 183 SUPERFAMILY SSF56925 20 183 1.15E-19 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VEA_000761 915c04898bda7079d6310bb7c8313988 183 Gene3D G3DSA:2.40.160.20 21 183 2.3E-18 T 13-10-2018 VEA_000761 915c04898bda7079d6310bb7c8313988 183 Pfam PF13505 Outer membrane protein beta-barrel domain 7 183 2.5E-16 T 13-10-2018 IPR027385 Outer membrane protein beta-barrel VEA_004470 21bb06ca919646f8d281f8660d52c140 119 PIRSF PIRSF026426 1 119 4.5E-44 T 13-10-2018 IPR010865 Protein of unknown function DUF1499 VEA_004470 21bb06ca919646f8d281f8660d52c140 119 Pfam PF07386 Protein of unknown function (DUF1499) 7 112 6.1E-24 T 13-10-2018 IPR010865 Protein of unknown function DUF1499 VEA_001542 18d6bc0dfe550ffaa45fea1a209671a3 534 Gene3D G3DSA:3.90.226.10 271 534 1.5E-102 T 13-10-2018 VEA_001542 18d6bc0dfe550ffaa45fea1a209671a3 534 SUPERFAMILY SSF52096 276 534 2.49E-86 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEA_001542 18d6bc0dfe550ffaa45fea1a209671a3 534 SUPERFAMILY SSF52096 23 265 4.39E-70 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEA_001542 18d6bc0dfe550ffaa45fea1a209671a3 534 Gene3D G3DSA:3.90.226.10 1 270 2.1E-93 T 13-10-2018 VEA_001542 18d6bc0dfe550ffaa45fea1a209671a3 534 Pfam PF01039 Carboxyl transferase domain 48 524 7.8E-148 T 13-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 VEA_002429 73cc4d0bacec1dbd2cf5b9360a1adae9 366 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 346 4.4E-118 T 13-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 VEA_002429 73cc4d0bacec1dbd2cf5b9360a1adae9 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 344 2.0E-70 T 13-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 VEA_001065 8a7d98c7ae1d80584305cb726dbff090 610 Pfam PF06276 Ferric iron reductase FhuF-like transporter 396 557 9.3E-14 T 13-10-2018 IPR022770 Ferric iron reductase FhuF domain VEA_001065 8a7d98c7ae1d80584305cb726dbff090 610 Gene3D G3DSA:1.10.510.40 363 541 1.3E-9 T 13-10-2018 VEA_001065 8a7d98c7ae1d80584305cb726dbff090 610 Pfam PF04183 IucA / IucC family 162 372 5.7E-33 T 13-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 VEA_001894 8c2e47af12097112022ccb0345d0bffb 100 SUPERFAMILY SSF55174 1 77 1.55E-17 T 13-10-2018 VEA_001894 8c2e47af12097112022ccb0345d0bffb 100 Gene3D G3DSA:3.10.290.10 1 79 1.4E-20 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VEA_003534 cef8479705517fde5c55ab6aa7287f13 356 Pfam PF13439 Glycosyltransferase Family 4 25 168 9.6E-15 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 VEA_003534 cef8479705517fde5c55ab6aa7287f13 356 SUPERFAMILY SSF53756 18 350 2.2E-54 T 13-10-2018 VEA_003534 cef8479705517fde5c55ab6aa7287f13 356 Pfam PF00534 Glycosyl transferases group 1 187 331 2.2E-21 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 VEA_003534 cef8479705517fde5c55ab6aa7287f13 356 Gene3D G3DSA:3.40.50.2000 26 343 1.1E-46 T 13-10-2018 VEA_003534 cef8479705517fde5c55ab6aa7287f13 356 Gene3D G3DSA:3.40.50.2000 179 337 1.1E-46 T 13-10-2018 VEA_002454 7a672b73c97d289717bd7631eecf3938 185 Pfam PF02325 YGGT family 10 78 1.6E-19 T 13-10-2018 IPR003425 CCB3/YggT GO:0016020 VEA_002454 7a672b73c97d289717bd7631eecf3938 185 Pfam PF02325 YGGT family 109 173 4.4E-19 T 13-10-2018 IPR003425 CCB3/YggT GO:0016020 VEA_003775 8509bcf33e10a5b12a60390522557a0c 115 SUPERFAMILY SSF46626 30 113 1.55E-15 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEA_003775 8509bcf33e10a5b12a60390522557a0c 115 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 36 110 7.0E-7 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VEA_003775 8509bcf33e10a5b12a60390522557a0c 115 Gene3D G3DSA:1.10.760.10 26 114 3.2E-21 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VEA_002343 a62113938c9df315730818a1c9f30bd3 154 Gene3D G3DSA:1.10.10.10 3 89 3.4E-34 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_002343 a62113938c9df315730818a1c9f30bd3 154 SUPERFAMILY SSF46785 11 144 2.2E-35 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_002343 a62113938c9df315730818a1c9f30bd3 154 Gene3D G3DSA:3.30.1490.190 90 150 2.4E-16 T 13-10-2018 VEA_002343 a62113938c9df315730818a1c9f30bd3 154 Pfam PF01475 Ferric uptake regulator family 19 138 1.4E-19 T 13-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 VEA_004497 45672983a1bfede7ac6d8f54d52cf92e 105 Pfam PF04999 Cell division protein FtsL 8 103 8.3E-36 T 13-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 VEA_004497 45672983a1bfede7ac6d8f54d52cf92e 105 Hamap MF_00910 Cell division protein FtsL [ftsL]. 19 102 16.206 T 13-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 VEA_004497 45672983a1bfede7ac6d8f54d52cf92e 105 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 22 102 1.8E-25 T 13-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 VEA_004103 09e374b6ad08098ef1bf85177d203570 758 Gene3D G3DSA:3.40.50.300 3 200 4.2E-44 T 13-10-2018 VEA_004103 09e374b6ad08098ef1bf85177d203570 758 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 9 687 2.9E-180 T 13-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 VEA_004103 09e374b6ad08098ef1bf85177d203570 758 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.4E-5 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 VEA_004103 09e374b6ad08098ef1bf85177d203570 758 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 53 68 2.4E-5 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 VEA_004103 09e374b6ad08098ef1bf85177d203570 758 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.4E-5 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 VEA_004103 09e374b6ad08098ef1bf85177d203570 758 SUPERFAMILY SSF52540 4 183 6.51E-39 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_004103 09e374b6ad08098ef1bf85177d203570 758 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 156 2.1E-13 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VEA_004103 09e374b6ad08098ef1bf85177d203570 758 Pfam PF07664 Ferrous iron transport protein B C terminus 452 504 1.7E-18 T 13-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 VEA_004103 09e374b6ad08098ef1bf85177d203570 758 Pfam PF02421 Ferrous iron transport protein B 4 161 5.2E-59 T 13-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 VEA_004103 09e374b6ad08098ef1bf85177d203570 758 Pfam PF07670 Nucleoside recognition 349 440 2.1E-13 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VEA_004103 09e374b6ad08098ef1bf85177d203570 758 Pfam PF07670 Nucleoside recognition 509 690 4.8E-37 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VEA_002233 78fc67f3ef4b445af171e34862e425ee 456 Pfam PF01145 SPFH domain / Band 7 family 34 285 2.5E-38 T 13-10-2018 IPR001107 Band 7 domain VEA_001832 8796fa8485c731cfb4d62e8eb8c94198 539 Pfam PF03235 Protein of unknown function DUF262 232 293 8.5E-16 T 13-10-2018 IPR004919 Domain of unknown function DUF262 VEA_004018 110116af2f35545bab22346bc7368053 119 Gene3D G3DSA:1.10.3340.10 18 119 1.4E-45 T 13-10-2018 IPR036810 SMc04008-like superfamily VEA_004018 110116af2f35545bab22346bc7368053 119 SUPERFAMILY SSF158757 22 99 2.62E-36 T 13-10-2018 IPR036810 SMc04008-like superfamily VEA_004018 110116af2f35545bab22346bc7368053 119 Pfam PF06844 Protein of unknown function (DUF1244) 49 115 2.0E-35 T 13-10-2018 IPR023163 SMc04008-like domain VEA_002930 b30dae14942f101e14fc4fea7c4645cb 212 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 2 204 6.3E-66 T 13-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VEA_002930 b30dae14942f101e14fc4fea7c4645cb 212 Pfam PF01914 MarC family integral membrane protein 8 208 1.9E-64 T 13-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VEA_004074 ee7ddd4d2be289f8b4c340bfee37d15d 203 Pfam PF11659 Protein of unknown function (DUF3261) 55 198 5.9E-33 T 13-10-2018 IPR021675 Protein of unknown function DUF3261 VEA_001505 f4623bc435c9dec289442b8747261c4e 328 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 177 4.2E-42 T 13-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain VEA_001505 f4623bc435c9dec289442b8747261c4e 328 SUPERFAMILY SSF52540 4 171 1.38E-26 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001505 f4623bc435c9dec289442b8747261c4e 328 SMART SM00833 241 324 3.3E-4 T 13-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal VEA_001505 f4623bc435c9dec289442b8747261c4e 328 Gene3D G3DSA:3.40.50.300 2 197 2.9E-45 T 13-10-2018 VEA_000896 2afe37658807345c28832fbe335d2c78 170 Pfam PF01661 Macro domain 20 136 4.5E-38 T 13-10-2018 IPR002589 Macro domain VEA_000896 2afe37658807345c28832fbe335d2c78 170 SMART SM00506 3 136 5.1E-49 T 13-10-2018 IPR002589 Macro domain VEA_000896 2afe37658807345c28832fbe335d2c78 170 Gene3D G3DSA:3.40.220.10 1 170 2.9E-61 T 13-10-2018 VEA_000896 2afe37658807345c28832fbe335d2c78 170 SUPERFAMILY SSF52949 4 168 1.16E-52 T 13-10-2018 VEA_000396 a9e73322a822fbd2c337e34dd193172b 593 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 7 459 2.0E-148 T 13-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VEA_000396 a9e73322a822fbd2c337e34dd193172b 593 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 2 458 1.8E-156 T 13-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VEA_000396 a9e73322a822fbd2c337e34dd193172b 593 ProSitePatterns PS01303 BCCT family of transporters signature. 277 286 - T 13-10-2018 IPR018093 BCCT transporter, conserved site VEA_001438 63156bcbfc8fdb14c1b1b66784ee54fa 204 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 15 194 2.5E-27 T 13-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 VEA_001438 63156bcbfc8fdb14c1b1b66784ee54fa 204 SUPERFAMILY SSF56529 12 186 2.22E-46 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VEA_001438 63156bcbfc8fdb14c1b1b66784ee54fa 204 Gene3D G3DSA:3.90.850.10 7 203 8.3E-46 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VEA_004271 c56f9f0e5df51807f37aa289188c3f66 154 Gene3D G3DSA:3.40.50.2020 1 152 4.6E-41 T 13-10-2018 VEA_004271 c56f9f0e5df51807f37aa289188c3f66 154 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 153 37.808 T 13-10-2018 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 VEA_004271 c56f9f0e5df51807f37aa289188c3f66 154 Pfam PF00156 Phosphoribosyl transferase domain 28 145 5.5E-13 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VEA_004271 c56f9f0e5df51807f37aa289188c3f66 154 SUPERFAMILY SSF53271 5 146 3.69E-28 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like VEA_000659 b95d6a0657900c2672e9206790b7e50e 528 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 37 514 9.3E-145 T 13-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VEA_003902 269a2e9bcd7290bb6bc86a4632df872f 566 SUPERFAMILY SSF56349 232 554 1.0E-38 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VEA_003902 269a2e9bcd7290bb6bc86a4632df872f 566 Gene3D G3DSA:1.10.150.130 226 363 1.8E-10 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal VEA_003902 269a2e9bcd7290bb6bc86a4632df872f 566 Gene3D G3DSA:1.10.443.10 377 560 4.9E-17 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VEA_003902 269a2e9bcd7290bb6bc86a4632df872f 566 Pfam PF00589 Phage integrase family 400 534 1.1E-8 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VEA_003753 b56668d2b408e8500c1a23b9130a7c9d 195 Gene3D G3DSA:3.30.1460.30 4 102 1.0E-17 T 13-10-2018 VEA_003753 b56668d2b408e8500c1a23b9130a7c9d 195 Gene3D G3DSA:1.10.150.20 113 195 7.9E-15 T 13-10-2018 VEA_003753 b56668d2b408e8500c1a23b9130a7c9d 195 SUPERFAMILY SSF159894 3 103 8.89E-28 T 13-10-2018 VEA_003753 b56668d2b408e8500c1a23b9130a7c9d 195 PIRSF PIRSF028788 6 195 2.1E-34 T 13-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type VEA_003753 b56668d2b408e8500c1a23b9130a7c9d 195 Pfam PF04994 TfoX C-terminal domain 114 192 6.8E-26 T 13-10-2018 IPR007077 TfoX, C-terminal VEA_003753 b56668d2b408e8500c1a23b9130a7c9d 195 Pfam PF04993 TfoX N-terminal domain 11 101 7.9E-24 T 13-10-2018 IPR007076 TfoX, N-terminal VEA_002819 79f8e9596480203b27de20efcfb085d9 147 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 3 142 7.1E-38 T 13-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 VEA_002819 79f8e9596480203b27de20efcfb085d9 147 Pfam PF02050 Flagellar FliJ protein 17 140 9.7E-31 T 13-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 VEA_003860 be2dcec185ebd29ff7e78f804edfee8c 124 Pfam PF11086 Protein of unknown function (DUF2878) 2 104 5.8E-23 T 13-10-2018 IPR021306 Protein of unknown function DUF2878 VEA_000802 a4dc786f27d7fe567a52b52b0546f884 362 Pfam PF12060 Domain of unknown function (DUF3541) 33 253 5.0E-110 T 13-10-2018 IPR021928 Protein of unknown function DUF3541 VEA_000335 71fcb653c66f829bad416bd388e85bb9 243 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 25 231 7.8E-58 T 13-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 VEA_000335 71fcb653c66f829bad416bd388e85bb9 243 Pfam PF04973 Nicotinamide mononucleotide transporter 25 228 3.0E-54 T 13-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 VEA_003303 af16d35132640fe27aa7f9f7e894ccb4 87 Gene3D G3DSA:3.30.70.100 2 84 5.1E-9 T 13-10-2018 VEA_003303 af16d35132640fe27aa7f9f7e894ccb4 87 Pfam PF03992 Antibiotic biosynthesis monooxygenase 29 72 9.3E-6 T 13-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain VEA_003303 af16d35132640fe27aa7f9f7e894ccb4 87 SUPERFAMILY SSF54909 8 78 6.71E-13 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel VEA_000053 de0c551bcf0f23ae625cef47697d7660 243 Pfam PF03591 AzlC protein 32 171 4.3E-35 T 13-10-2018 IPR011606 Branched-chain amino acid transport, permease VEA_003264 465c26bd1da8473860b197196f55dcb3 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 4.9E-14 T 13-10-2018 IPR021681 Protein of unknown function DUF3265 VEA_003188 a19892173e5b8325c679db1b3976dafa 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 2.3E-14 T 13-10-2018 IPR021681 Protein of unknown function DUF3265 VEA_003746 19502fb679b4f4421f4f74894263b548 573 Pfam PF00664 ABC transporter transmembrane region 53 272 3.7E-11 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VEA_003746 19502fb679b4f4421f4f74894263b548 573 SUPERFAMILY SSF90123 7 322 6.28E-40 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEA_003746 19502fb679b4f4421f4f74894263b548 573 Pfam PF00005 ABC transporter 356 502 4.9E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_003746 19502fb679b4f4421f4f74894263b548 573 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VEA_003746 19502fb679b4f4421f4f74894263b548 573 SUPERFAMILY SSF52540 334 571 1.03E-72 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_003746 19502fb679b4f4421f4f74894263b548 573 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 6 533 1.4E-133 T 13-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 VEA_003746 19502fb679b4f4421f4f74894263b548 573 Gene3D G3DSA:3.40.50.300 326 573 2.0E-76 T 13-10-2018 VEA_003746 19502fb679b4f4421f4f74894263b548 573 SMART SM00382 365 549 2.5E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_003746 19502fb679b4f4421f4f74894263b548 573 Gene3D G3DSA:1.20.1560.10 1 321 2.5E-27 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VEA_003112 48e0e9b1b1ac049c9c8703434fd5b9d6 207 SUPERFAMILY SSF48452 75 187 3.52E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_003112 48e0e9b1b1ac049c9c8703434fd5b9d6 207 Gene3D G3DSA:1.25.40.10 44 116 9.7E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_003112 48e0e9b1b1ac049c9c8703434fd5b9d6 207 Gene3D G3DSA:1.25.40.10 117 206 2.7E-26 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_000372 e67886cc8a891da430d64597814a5461 258 Gene3D G3DSA:3.90.226.10 1 258 6.0E-80 T 13-10-2018 VEA_000372 e67886cc8a891da430d64597814a5461 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 257 4.5E-58 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 VEA_000372 e67886cc8a891da430d64597814a5461 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 13-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 VEA_000372 e67886cc8a891da430d64597814a5461 258 SUPERFAMILY SSF52096 3 257 7.37E-77 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VEA_003301 e7bf2eccec69198d55f87766256a3505 181 SUPERFAMILY SSF55729 3 174 7.22E-51 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase VEA_003301 e7bf2eccec69198d55f87766256a3505 181 Gene3D G3DSA:3.40.630.30 3 175 6.6E-49 T 13-10-2018 VEA_003301 e7bf2eccec69198d55f87766256a3505 181 Pfam PF13302 Acetyltransferase (GNAT) domain 10 149 8.2E-32 T 13-10-2018 IPR000182 GNAT domain VEA_001759 5552d4f8c8436407fe59171369fef852 115 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 90 6.1E-6 T 13-10-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 VEA_001759 5552d4f8c8436407fe59171369fef852 115 SUPERFAMILY SSF55331 2 115 5.5E-34 T 13-10-2018 IPR014347 Tautomerase/MIF superfamily VEA_001759 5552d4f8c8436407fe59171369fef852 115 Gene3D G3DSA:3.30.429.10 1 115 3.4E-33 T 13-10-2018 IPR014347 Tautomerase/MIF superfamily VEA_003814 af8301c15b4d3d606c4d516e888bfa67 223 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 219 1.9E-94 T 13-10-2018 IPR014319 Phage shock protein, PspA VEA_003814 af8301c15b4d3d606c4d516e888bfa67 223 Pfam PF04012 PspA/IM30 family 2 217 6.6E-62 T 13-10-2018 IPR007157 PspA/IM30 VEA_000236 43a1364b4c526379e237034fdd87e85d 153 Gene3D G3DSA:1.20.1290.10 1 149 1.1E-34 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 VEA_000236 43a1364b4c526379e237034fdd87e85d 153 Pfam PF02627 Carboxymuconolactone decarboxylase family 41 98 1.5E-12 T 13-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 VEA_000236 43a1364b4c526379e237034fdd87e85d 153 SUPERFAMILY SSF69118 6 147 1.83E-35 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 VEA_000236 43a1364b4c526379e237034fdd87e85d 153 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 41 81 5.4E-15 T 13-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 VEA_000521 707fe2766c7e08114129113382a8e628 183 PIRSF PIRSF006324 1 183 2.6E-41 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEA_000521 707fe2766c7e08114129113382a8e628 183 Pfam PF01810 LysE type translocator 3 182 1.3E-23 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEA_002606 ea4ab9e90e6d2f471ccc8d4be0404a26 112 Pfam PF03840 Preprotein translocase SecG subunit 4 71 2.1E-21 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VEA_002606 ea4ab9e90e6d2f471ccc8d4be0404a26 112 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 9.7E-25 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VEA_002606 ea4ab9e90e6d2f471ccc8d4be0404a26 112 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 5.8E-44 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VEA_002606 ea4ab9e90e6d2f471ccc8d4be0404a26 112 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 5.8E-44 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VEA_002606 ea4ab9e90e6d2f471ccc8d4be0404a26 112 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 5.8E-44 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VEA_002606 ea4ab9e90e6d2f471ccc8d4be0404a26 112 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 5.8E-44 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VEA_001193 1014ee6aa0f8e23367c43eeb061e6f84 307 SUPERFAMILY SSF103481 182 288 4.18E-9 T 13-10-2018 VEA_001193 1014ee6aa0f8e23367c43eeb061e6f84 307 SUPERFAMILY SSF103481 41 138 8.5E-11 T 13-10-2018 VEA_001193 1014ee6aa0f8e23367c43eeb061e6f84 307 Pfam PF00892 EamA-like transporter family 6 136 8.2E-11 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEA_001193 1014ee6aa0f8e23367c43eeb061e6f84 307 Pfam PF00892 EamA-like transporter family 150 288 4.4E-10 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEA_003613 72e56e7d0b863979f0b831ad62b2e935 519 ProSitePatterns PS00455 Putative AMP-binding domain signature. 156 167 - T 13-10-2018 IPR020845 AMP-binding, conserved site VEA_003613 72e56e7d0b863979f0b831ad62b2e935 519 SUPERFAMILY SSF56801 2 486 1.7E-84 T 13-10-2018 VEA_003613 72e56e7d0b863979f0b831ad62b2e935 519 Gene3D G3DSA:3.40.50.12780 4 384 1.7E-68 T 13-10-2018 VEA_003613 72e56e7d0b863979f0b831ad62b2e935 519 Pfam PF00501 AMP-binding enzyme 10 391 1.2E-59 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VEA_001239 7110af083e6e4136efe11f4a94641df9 393 Gene3D G3DSA:1.20.1250.20 6 198 9.0E-7 T 13-10-2018 VEA_001239 7110af083e6e4136efe11f4a94641df9 393 Pfam PF07690 Major Facilitator Superfamily 15 345 1.2E-12 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VEA_001239 7110af083e6e4136efe11f4a94641df9 393 Gene3D G3DSA:1.20.1250.20 200 385 2.6E-15 T 13-10-2018 VEA_001239 7110af083e6e4136efe11f4a94641df9 393 SUPERFAMILY SSF103473 14 378 2.49E-35 T 13-10-2018 IPR036259 MFS transporter superfamily VEA_000961 511f5936b778342d4b33d39993513e01 83 Pfam PF11280 Protein of unknown function (DUF3081) 5 81 3.1E-29 T 13-10-2018 IPR021432 Protein of unknown function DUF3081 VEA_001463 e509d4265f71636778083e361e9a8457 248 Gene3D G3DSA:2.50.20.10 15 244 7.4E-59 T 13-10-2018 VEA_001463 e509d4265f71636778083e361e9a8457 248 Pfam PF17131 Outer membrane lipoprotein-sorting protein 64 244 8.3E-54 T 13-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein VEA_003806 9170e27eee084a0611c7ad606a69dcee 309 SUPERFAMILY SSF53474 28 305 6.16E-48 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_003806 9170e27eee084a0611c7ad606a69dcee 309 Gene3D G3DSA:3.40.50.1820 26 309 3.2E-88 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_003806 9170e27eee084a0611c7ad606a69dcee 309 Pfam PF00561 alpha/beta hydrolase fold 33 180 4.6E-15 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VEA_002112 66742ccda1c80823cd789c4e58bb0b48 243 Pfam PF04340 Protein of unknown function, DUF484 15 225 3.5E-68 T 13-10-2018 IPR007435 Protein of unknown function DUF484 VEA_002112 66742ccda1c80823cd789c4e58bb0b48 243 Gene3D G3DSA:3.30.450.40 52 227 4.1E-36 T 13-10-2018 IPR029016 GAF-like domain superfamily VEA_002618 2ab9c69d2935d2f2914c9fbb0095c01d 337 Pfam PF01136 Peptidase family U32 75 336 1.8E-68 T 13-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VEA_002618 2ab9c69d2935d2f2914c9fbb0095c01d 337 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 13-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VEA_003426 b595e760913c08539813e4a5d676ad82 833 Pfam PF02470 MlaD protein 349 414 1.4E-5 T 13-10-2018 IPR003399 Mce/MlaD VEA_003426 b595e760913c08539813e4a5d676ad82 833 Pfam PF02470 MlaD protein 249 307 3.2E-6 T 13-10-2018 IPR003399 Mce/MlaD VEA_003426 b595e760913c08539813e4a5d676ad82 833 Pfam PF02470 MlaD protein 596 683 1.1E-5 T 13-10-2018 IPR003399 Mce/MlaD VEA_003426 b595e760913c08539813e4a5d676ad82 833 Pfam PF02470 MlaD protein 705 772 5.0E-7 T 13-10-2018 IPR003399 Mce/MlaD VEA_003426 b595e760913c08539813e4a5d676ad82 833 Pfam PF02470 MlaD protein 1 89 1.7E-11 T 13-10-2018 IPR003399 Mce/MlaD VEA_004000 5f380bd40f07046908e3b60c4951e66a 196 Pfam PF13036 Peptidoglycan-synthase activator LpoB 41 185 3.1E-55 T 13-10-2018 IPR014094 Penicillin-binding protein activator LpoB VEA_004000 5f380bd40f07046908e3b60c4951e66a 196 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 3 187 7.5E-75 T 13-10-2018 IPR014094 Penicillin-binding protein activator LpoB VEA_004000 5f380bd40f07046908e3b60c4951e66a 196 Gene3D G3DSA:3.40.50.10610 39 188 2.9E-43 T 13-10-2018 VEA_004383 8dec83f9c96118dce20c1bf12f62ea2d 319 SUPERFAMILY SSF53850 38 316 6.52E-65 T 13-10-2018 VEA_004383 8dec83f9c96118dce20c1bf12f62ea2d 319 Pfam PF12849 PBP superfamily domain 34 290 4.5E-29 T 13-10-2018 IPR024370 PBP domain VEA_004383 8dec83f9c96118dce20c1bf12f62ea2d 319 Gene3D G3DSA:3.40.190.10 121 263 7.0E-99 T 13-10-2018 VEA_004383 8dec83f9c96118dce20c1bf12f62ea2d 319 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 13 305 7.0E-74 T 13-10-2018 IPR011862 Phosphate binding protein GO:0042301 VEA_004383 8dec83f9c96118dce20c1bf12f62ea2d 319 Gene3D G3DSA:3.40.190.10 37 307 7.0E-99 T 13-10-2018 VEA_004241 7b4cd51b3394442f371b2b3ed0a704b9 258 PIRSF PIRSF029037 1 258 6.3E-117 T 13-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 VEA_004241 7b4cd51b3394442f371b2b3ed0a704b9 258 Pfam PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) 1 256 4.5E-115 T 13-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 VEA_002889 94bcd697a5b08bc79b9778cc1fe25455 2416 Pfam PF05593 RHS Repeat 1345 1373 1.5E-5 T 13-10-2018 IPR031325 RHS repeat VEA_002889 94bcd697a5b08bc79b9778cc1fe25455 2416 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1339 1365 6.7E-6 T 13-10-2018 IPR006530 YD repeat VEA_002889 94bcd697a5b08bc79b9778cc1fe25455 2416 Gene3D G3DSA:2.180.10.10 1633 2106 7.4E-33 T 13-10-2018 VEA_002889 94bcd697a5b08bc79b9778cc1fe25455 2416 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 2018 2107 1.4E-16 T 13-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 VEA_002889 94bcd697a5b08bc79b9778cc1fe25455 2416 SUPERFAMILY SSF69318 307 529 8.76E-8 T 13-10-2018 VEA_000608 d73675b057506b0a5c7df1be19955b90 79 Gene3D G3DSA:1.20.58.660 11 78 3.5E-14 T 13-10-2018 VEA_000608 d73675b057506b0a5c7df1be19955b90 79 Pfam PF04325 Protein of unknown function (DUF465) 29 74 7.7E-11 T 13-10-2018 IPR007420 Protein of unknown function DUF465 VEA_002134 92e702994b91c295bcee3c5271314649 73 Pfam PF10678 Protein of unknown function (DUF2492) 3 72 1.8E-23 T 13-10-2018 IPR019620 Putative metal-binding protein VEA_002134 92e702994b91c295bcee3c5271314649 73 TIGRFAM TIGR03853 matur_matur: putative metal-binding protein 3 73 2.9E-24 T 13-10-2018 IPR019620 Putative metal-binding protein VEA_004002 43ca7e2cfeeaaa53012e04159f27fd2d 465 SUPERFAMILY SSF48452 120 258 1.63E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VEA_000847 7b4eaaaedaff7d5e95d5670716eb8e19 455 Pfam PF01618 MotA/TolQ/ExbB proton channel family 307 425 2.2E-30 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VEA_000847 7b4eaaaedaff7d5e95d5670716eb8e19 455 PIRSF PIRSF037714 1 450 6.2E-153 T 13-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein VEA_001188 29d10656499c0697f314e997a83804c8 251 Pfam PF02108 Flagellar assembly protein FliH 106 228 2.0E-28 T 13-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE VEA_001188 29d10656499c0697f314e997a83804c8 251 SUPERFAMILY SSF160527 132 241 3.14E-6 T 13-10-2018 VEA_000640 b0e278af551d185e7e6533fd3761b4ee 258 PIRSF PIRSF015736 11 250 9.1E-61 T 13-10-2018 IPR026286 Maleate isomerase/Arylmalonate decarboxylase VEA_000640 b0e278af551d185e7e6533fd3761b4ee 258 Gene3D G3DSA:3.40.50.12500 24 250 4.8E-51 T 13-10-2018 VEA_001240 22dd73c7c0b4a771b4c6a19108f76ea3 93 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 15 78 3.0E-27 T 13-10-2018 VEA_001240 22dd73c7c0b4a771b4c6a19108f76ea3 93 Pfam PF14145 YrhK-like protein 21 74 4.9E-17 T 13-10-2018 IPR025424 YrhK domain VEA_002650 ede9aabcd79d22d51386f3bb361acec4 322 Pfam PF00482 Type II secretion system (T2SS), protein F 156 279 5.4E-18 T 13-10-2018 IPR018076 Type II secretion system F domain VEA_000743 49c346f9cb17bbc079d31888ae9602d7 145 SUPERFAMILY SSF140566 8 136 5.75E-27 T 13-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 VEA_000743 49c346f9cb17bbc079d31888ae9602d7 145 Pfam PF05130 FlgN protein 8 132 2.4E-14 T 13-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 VEA_000743 49c346f9cb17bbc079d31888ae9602d7 145 Gene3D G3DSA:1.20.58.300 6 138 4.0E-20 T 13-10-2018 VEA_000683 dccb86fec352651397d7dcf3e000b9d6 69 Pfam PF04400 (Na+)-NQR maturation NqrM 21 62 4.0E-18 T 13-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM VEA_001837 3a2700ef7028778b6fe344212c215515 141 Gene3D G3DSA:3.10.450.430 4 138 1.7E-14 T 13-10-2018 VEA_001837 3a2700ef7028778b6fe344212c215515 141 Pfam PF10980 Protein of unknown function (DUF2787) 24 126 3.1E-15 T 13-10-2018 IPR021248 Protein of unknown function DUF2787 VEA_003685 ddc4ee803e6f5b2555cbccccb8cc7c0d 191 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 19 82 3.7E-7 T 13-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 VEA_003584 7fa1997d4d35628d925bccb3854de4a6 157 SUPERFAMILY SSF52172 1 132 1.99E-20 T 13-10-2018 IPR011006 CheY-like superfamily VEA_003584 7fa1997d4d35628d925bccb3854de4a6 157 SMART SM00448 4 125 1.9E-11 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_003584 7fa1997d4d35628d925bccb3854de4a6 157 Gene3D G3DSA:3.40.50.2300 1 135 1.6E-19 T 13-10-2018 VEA_003584 7fa1997d4d35628d925bccb3854de4a6 157 Pfam PF00072 Response regulator receiver domain 6 125 3.4E-14 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VEA_003210 4bcee67dacf3b14321a5e81d2547514e 43 Pfam PF11665 Protein of unknown function (DUF3265) 16 43 1.2E-15 T 13-10-2018 IPR021681 Protein of unknown function DUF3265 VEA_000334 7d4fdcd7ee9ac5d0f3d40c65fdefc4e1 243 Gene3D G3DSA:3.40.50.1580 1 243 4.4E-76 T 13-10-2018 VEA_000334 7d4fdcd7ee9ac5d0f3d40c65fdefc4e1 243 Pfam PF01048 Phosphorylase superfamily 17 200 6.0E-35 T 13-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VEA_000334 7d4fdcd7ee9ac5d0f3d40c65fdefc4e1 243 SUPERFAMILY SSF53167 4 220 2.23E-66 T 13-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 VEA_000688 3cee454873e2b90267811282afb80561 178 Pfam PF04170 NlpE N-terminal domain 83 167 3.4E-30 T 13-10-2018 IPR007298 Copper resistance lipoprotein NlpE VEA_000688 3cee454873e2b90267811282afb80561 178 Gene3D G3DSA:2.40.128.640 70 178 1.3E-40 T 13-10-2018 VEA_003537 5c2907a3ab3e81bcec76d2022b620ae2 476 Pfam PF01943 Polysaccharide biosynthesis protein 7 268 3.3E-11 T 13-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 VEA_002961 9ffff68b4819c8dc6e6ca067d1d16bea 300 Gene3D G3DSA:1.10.3720.10 96 296 4.0E-20 T 13-10-2018 IPR035906 MetI-like superfamily VEA_002961 9ffff68b4819c8dc6e6ca067d1d16bea 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 69 1.9E-14 T 13-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VEA_002961 9ffff68b4819c8dc6e6ca067d1d16bea 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 298 3.4E-27 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_002961 9ffff68b4819c8dc6e6ca067d1d16bea 300 SUPERFAMILY SSF161098 97 281 1.03E-26 T 13-10-2018 IPR035906 MetI-like superfamily VEA_003498 6a0b92f96e87e933b8ee822ba65bf9e3 209 Pfam PF11748 Protein of unknown function (DUF3306) 4 120 3.2E-26 T 13-10-2018 IPR021735 Protein of unknown function DUF3306 VEA_001250 c09ec736cd07c32c521c27f29c4ae678 316 Pfam PF08349 Protein of unknown function (DUF1722) 191 307 1.0E-44 T 13-10-2018 IPR013560 Domain of unknown function DUF1722 VEA_001250 c09ec736cd07c32c521c27f29c4ae678 316 PIRSF PIRSF037004 1 316 7.9E-139 T 13-10-2018 IPR017087 Uncharacterised conserved protein UCP037004 VEA_001250 c09ec736cd07c32c521c27f29c4ae678 316 Pfam PF04463 Protein of unknown function (DUF523) 7 148 6.4E-37 T 13-10-2018 IPR007553 Domain of unknown function DUF523 VEA_002668 1afa6b5f51ded8ab19c260d056dab3c4 110 Gene3D G3DSA:2.40.50.140 1 110 1.7E-38 T 13-10-2018 VEA_002668 1afa6b5f51ded8ab19c260d056dab3c4 110 Pfam PF01588 Putative tRNA binding domain 14 107 5.6E-30 T 13-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 VEA_002668 1afa6b5f51ded8ab19c260d056dab3c4 110 SUPERFAMILY SSF50249 8 109 2.69E-32 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold VEA_003821 0870524f0c4d0778e1b823f9cc6b1adc 129 Pfam PF11042 Protein of unknown function (DUF2750) 23 122 4.4E-37 T 13-10-2018 IPR021284 Protein of unknown function DUF2750 VEA_000685 b372d3a8a805111c4a61c754c6c2f400 96 SUPERFAMILY SSF88659 36 79 2.62E-6 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VEA_000685 b372d3a8a805111c4a61c754c6c2f400 96 Hamap MF_00674 UPF0251 protein . 2 95 24.099 T 13-10-2018 IPR002852 Uncharacterised protein family UPF0251 VEA_000685 b372d3a8a805111c4a61c754c6c2f400 96 Gene3D G3DSA:1.10.10.10 29 83 5.1E-8 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000685 b372d3a8a805111c4a61c754c6c2f400 96 Pfam PF02001 Protein of unknown function DUF134 2 89 4.7E-21 T 13-10-2018 IPR002852 Uncharacterised protein family UPF0251 VEA_003512 e3e0671b2c10f8b03397ac8501991d2d 273 Pfam PF04116 Fatty acid hydroxylase superfamily 92 229 8.8E-26 T 13-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 VEA_002157 8c97e65b862374054c2b92694f4aafbc 227 Pfam PF01902 Diphthamide synthase 6 214 3.0E-21 T 13-10-2018 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 VEA_002157 8c97e65b862374054c2b92694f4aafbc 227 Gene3D G3DSA:3.40.50.620 2 145 1.2E-15 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VEA_002157 8c97e65b862374054c2b92694f4aafbc 227 Gene3D G3DSA:3.90.1490.10 146 226 5.2E-8 T 13-10-2018 VEA_002157 8c97e65b862374054c2b92694f4aafbc 227 SUPERFAMILY SSF52402 4 222 2.96E-54 T 13-10-2018 VEA_001148 f8629dfc5d753818b3dfa9b8a9e26842 289 SUPERFAMILY SSF103481 184 280 7.06E-11 T 13-10-2018 VEA_001148 f8629dfc5d753818b3dfa9b8a9e26842 289 Pfam PF00892 EamA-like transporter family 146 275 1.1E-14 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VEA_001148 f8629dfc5d753818b3dfa9b8a9e26842 289 SUPERFAMILY SSF103481 39 139 5.23E-8 T 13-10-2018 VEA_003704 8def13e96756e5e2593acc4c2bbf0672 293 Pfam PF03547 Membrane transport protein 152 284 2.6E-7 T 13-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 VEA_003401 3f6af5b13908b6088ea0a55d8aafea47 117 Pfam PF11042 Protein of unknown function (DUF2750) 13 113 2.0E-33 T 13-10-2018 IPR021284 Protein of unknown function DUF2750 VEA_001762 c17811c9fee101af39ae04f1e84b35cf 620 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 97 528 4.0E-14 T 13-10-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH VEA_001461 798248051e92a4a720215f734257082a 113 Pfam PF03889 Domain of unknown function 22 59 1.7E-21 T 13-10-2018 IPR005589 Alternative ribosome-rescue factor A GO:0072344 VEA_003983 18a845bc5b1124503eee95b88e8fe08e 519 Pfam PF04293 SpoVR like protein 26 456 5.6E-177 T 13-10-2018 IPR007390 Sporulation stage V, protein R VEA_000604 f59627809901860599cf8ce128eef3de 267 SUPERFAMILY SSF81345 40 244 1.02E-10 T 13-10-2018 IPR037294 ABC transporter, BtuC-like VEA_000604 f59627809901860599cf8ce128eef3de 267 Pfam PF00950 ABC 3 transport family 7 249 3.9E-10 T 13-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 VEA_002175 21c319abc4531fb4e04a58a4ce37afcf 161 Gene3D G3DSA:1.20.120.1370 1 154 3.5E-50 T 13-10-2018 IPR038309 Rsd/AlgQ superfamily VEA_002175 21c319abc4531fb4e04a58a4ce37afcf 161 PIRSF PIRSF016548 1 161 3.2E-67 T 13-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 VEA_002175 21c319abc4531fb4e04a58a4ce37afcf 161 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 151 3.8E-54 T 13-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 VEA_003659 d214ff77401217852ff38cea76f40e88 310 SUPERFAMILY SSF161098 106 291 6.67E-25 T 13-10-2018 IPR035906 MetI-like superfamily VEA_003659 d214ff77401217852ff38cea76f40e88 310 Gene3D G3DSA:1.10.3720.10 98 306 1.2E-16 T 13-10-2018 IPR035906 MetI-like superfamily VEA_003659 d214ff77401217852ff38cea76f40e88 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 127 308 2.8E-26 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VEA_003659 d214ff77401217852ff38cea76f40e88 310 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 27 66 2.0E-12 T 13-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VEA_001816 babdd08467de9eea8a93bcabb85a4026 253 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 31 195 4.9E-10 T 13-10-2018 IPR002654 Glycosyl transferase, family 25 VEA_002476 47d2fd12caf62cfe18ed671f830fe340 209 Pfam PF01810 LysE type translocator 15 202 3.1E-43 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEA_003286 2ba177342226f46c5b7b117fc0467bc0 80 Pfam PF12728 Helix-turn-helix domain 11 66 1.2E-7 T 13-10-2018 VEA_003999 b8de7239c081ad56d84a1b4dfabacccf 293 SUPERFAMILY SSF56112 24 270 1.04E-34 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily VEA_003999 b8de7239c081ad56d84a1b4dfabacccf 293 Pfam PF01636 Phosphotransferase enzyme family 30 234 1.5E-12 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase VEA_003999 b8de7239c081ad56d84a1b4dfabacccf 293 TIGRFAM TIGR02721 ycfN_thiK: thiamine kinase 30 284 7.6E-94 T 13-10-2018 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896 VEA_003999 b8de7239c081ad56d84a1b4dfabacccf 293 Gene3D G3DSA:3.90.1200.10 112 284 8.9E-15 T 13-10-2018 VEA_000295 6a4c0890e7286641ab777e3949fb3dab 629 Gene3D G3DSA:3.30.2010.10 94 188 2.6E-32 T 13-10-2018 VEA_000295 6a4c0890e7286641ab777e3949fb3dab 629 Pfam PF01435 Peptidase family M48 104 329 1.9E-28 T 13-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 VEA_000295 6a4c0890e7286641ab777e3949fb3dab 629 SUPERFAMILY SSF158682 505 608 2.09E-6 T 13-10-2018 IPR029024 TerB-like VEA_001704 41170cbf4a3b3635146744ec6f0bce21 205 SUPERFAMILY SSF52540 25 200 3.03E-38 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001704 41170cbf4a3b3635146744ec6f0bce21 205 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 30 202 38.611 T 13-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 VEA_001704 41170cbf4a3b3635146744ec6f0bce21 205 Pfam PF01583 Adenylylsulphate kinase 31 185 3.2E-70 T 13-10-2018 VEA_001704 41170cbf4a3b3635146744ec6f0bce21 205 Gene3D G3DSA:3.40.50.300 9 205 2.4E-78 T 13-10-2018 VEA_001704 41170cbf4a3b3635146744ec6f0bce21 205 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 14 198 5.7E-81 T 13-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 VEA_001914 dbe7091eeeebdb094507e5322b256341 212 SUPERFAMILY SSF53335 48 199 7.58E-19 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VEA_001914 dbe7091eeeebdb094507e5322b256341 212 Pfam PF13489 Methyltransferase domain 73 192 2.7E-16 T 13-10-2018 VEA_001914 dbe7091eeeebdb094507e5322b256341 212 Gene3D G3DSA:3.40.50.150 68 207 1.3E-12 T 13-10-2018 VEA_002616 7a5a509d377c57e8f5424f67ca9fd58a 448 PIRSF PIRSF006603 1 442 1.8E-64 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEA_002616 7a5a509d377c57e8f5424f67ca9fd58a 448 Pfam PF01554 MatE 240 398 2.3E-11 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEA_002616 7a5a509d377c57e8f5424f67ca9fd58a 448 Pfam PF01554 MatE 15 176 8.8E-23 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEA_002616 7a5a509d377c57e8f5424f67ca9fd58a 448 TIGRFAM TIGR00797 matE: MATE efflux family protein 15 410 7.1E-46 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VEA_003257 dd26f1c22684b5e229b7d1ba895eb4cd 211 Pfam PF01810 LysE type translocator 16 207 3.9E-32 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEA_003581 eaa1e5a9d3760b2140d1636819826342 207 PIRSF PIRSF006324 1 207 7.7E-60 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEA_003581 eaa1e5a9d3760b2140d1636819826342 207 Pfam PF01810 LysE type translocator 15 203 1.4E-35 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VEA_004460 87f55ca383dc9c965607416a5231caf8 91 Pfam PF11697 Protein of unknown function (DUF3293) 2 61 3.0E-11 T 13-10-2018 IPR021710 Protein of unknown function DUF3293 VEA_004530 99be977aaa6b980fdfc1d1e0d6a2e2e3 160 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 17 148 1.6E-17 T 13-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VEA_000966 bef23deebd3b5c1ef0e2fa8e629818e2 285 Gene3D G3DSA:3.40.50.300 2 262 2.4E-45 T 13-10-2018 VEA_000966 bef23deebd3b5c1ef0e2fa8e629818e2 285 SMART SM00382 30 208 3.4E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain VEA_000966 bef23deebd3b5c1ef0e2fa8e629818e2 285 SUPERFAMILY SSF52540 4 222 2.09E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_000966 bef23deebd3b5c1ef0e2fa8e629818e2 285 Pfam PF00005 ABC transporter 21 158 1.2E-24 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VEA_000315 34a3713778b25c573d77bd58cda72101 784 Pfam PF06934 Fatty acid cis/trans isomerase (CTI) 102 783 9.6E-299 T 13-10-2018 IPR010706 Fatty acid cis-trans isomerase VEA_001449 b1130a8f141ccba3d4162d41fce43177 78 Pfam PF11137 Protein of unknown function (DUF2909) 7 71 2.5E-22 T 13-10-2018 IPR021313 Protein of unknown function DUF2909 VEA_000058 a2d14c4fcef4b04b201e35d05d93ebe2 216 Pfam PF01764 Lipase (class 3) 14 158 2.6E-27 T 13-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 VEA_000058 a2d14c4fcef4b04b201e35d05d93ebe2 216 Gene3D G3DSA:3.40.50.1820 2 190 2.5E-32 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_000058 a2d14c4fcef4b04b201e35d05d93ebe2 216 SUPERFAMILY SSF53474 4 177 1.77E-32 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_001402 fcfe127bb1dea4ac37eb766ff94ed6ed 366 Pfam PF12698 ABC-2 family transporter protein 25 357 1.8E-45 T 13-10-2018 VEA_001402 fcfe127bb1dea4ac37eb766ff94ed6ed 366 PRINTS PR00164 ABC-2 type transport system membrane protein signature 251 275 6.0E-7 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VEA_001402 fcfe127bb1dea4ac37eb766ff94ed6ed 366 PRINTS PR00164 ABC-2 type transport system membrane protein signature 288 307 6.0E-7 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VEA_001402 fcfe127bb1dea4ac37eb766ff94ed6ed 366 PRINTS PR00164 ABC-2 type transport system membrane protein signature 308 327 6.0E-7 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VEA_003298 fce2115d37bc125d3a404a8af92af1af 133 SUPERFAMILY SSF54913 4 66 3.56E-8 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta VEA_003298 fce2115d37bc125d3a404a8af92af1af 133 Pfam PF09413 Putative prokaryotic signal transducing protein 4 65 3.0E-10 T 13-10-2018 IPR018551 Domain of unknown function DUF2007 VEA_002105 f880a9a5e35a5a374e59ec11a40d19d9 242 SUPERFAMILY SSF69618 1 241 2.09E-50 T 13-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VEA_002105 f880a9a5e35a5a374e59ec11a40d19d9 242 Pfam PF02602 Uroporphyrinogen-III synthase HemD 15 236 3.2E-32 T 13-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VEA_002105 f880a9a5e35a5a374e59ec11a40d19d9 242 Gene3D G3DSA:3.40.50.10090 32 161 2.5E-68 T 13-10-2018 VEA_002105 f880a9a5e35a5a374e59ec11a40d19d9 242 Gene3D G3DSA:3.40.50.10090 4 240 2.5E-68 T 13-10-2018 VEA_000079 becd7e83adf3a8673ecb01d25a143101 63 Pfam PF11661 Protein of unknown function (DUF2986) 1 43 5.2E-21 T 13-10-2018 IPR021677 Protein of unknown function DUF2986 VEA_002975 c374724e3497c626d71ccfe0b04b19a9 319 Gene3D G3DSA:1.20.225.30 243 314 1.8E-26 T 13-10-2018 VEA_002975 c374724e3497c626d71ccfe0b04b19a9 319 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 13-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 VEA_002975 c374724e3497c626d71ccfe0b04b19a9 319 SUPERFAMILY SSF51395 1 314 4.21E-74 T 13-10-2018 VEA_002975 c374724e3497c626d71ccfe0b04b19a9 319 Gene3D G3DSA:3.20.20.70 1 242 2.9E-80 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_002975 c374724e3497c626d71ccfe0b04b19a9 319 PIRSF PIRSF006621 1 319 2.2E-75 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VEA_002975 c374724e3497c626d71ccfe0b04b19a9 319 Pfam PF01207 Dihydrouridine synthase (Dus) 5 300 1.4E-78 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VEA_002975 c374724e3497c626d71ccfe0b04b19a9 319 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 52.508 T 13-10-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 VEA_001232 b3db093f0e4d9bdeecc64d26d93d6f2c 319 SUPERFAMILY SSF56935 23 319 8.55E-51 T 13-10-2018 VEA_001232 b3db093f0e4d9bdeecc64d26d93d6f2c 319 Pfam PF13609 Gram-negative porin 7 298 2.8E-28 T 13-10-2018 VEA_001232 b3db093f0e4d9bdeecc64d26d93d6f2c 319 Gene3D G3DSA:2.40.160.10 22 319 5.4E-62 T 13-10-2018 IPR023614 Porin domain superfamily VEA_001316 95ec832a5e504d87a11a6f662bc241ee 132 Pfam PF04892 VanZ like family 40 123 1.4E-8 T 13-10-2018 IPR006976 VanZ-like VEA_002294 d292b2ebde12ab402999271b289810c3 131 Pfam PF02635 DsrE/DsrF-like family 6 131 7.6E-29 T 13-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein VEA_002294 d292b2ebde12ab402999271b289810c3 131 SUPERFAMILY SSF75169 6 131 1.12E-37 T 13-10-2018 IPR027396 DsrEFH-like VEA_002294 d292b2ebde12ab402999271b289810c3 131 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 5 131 6.1E-55 T 13-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 VEA_002294 d292b2ebde12ab402999271b289810c3 131 Gene3D G3DSA:3.40.1260.10 1 131 2.8E-53 T 13-10-2018 IPR027396 DsrEFH-like VEA_004449 e755c99196e6a7e0047f9967a682d599 183 Gene3D G3DSA:1.20.120.520 1 152 1.2E-17 T 13-10-2018 VEA_004449 e755c99196e6a7e0047f9967a682d599 183 Pfam PF01814 Hemerythrin HHE cation binding domain 2 135 7.6E-15 T 13-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 VEA_003187 dbec21d396246a8d9b10cbd44412eff8 186 Pfam PF05076 Suppressor of fused protein (SUFU) 38 182 7.0E-15 T 13-10-2018 IPR020941 Suppressor of fused-like domain Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5610787|Reactome: R-HSA-5632684 VEA_003158 c745dd4dab1863d78bf0dd085958a135 179 SUPERFAMILY SSF111126 1 176 5.23E-52 T 13-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily VEA_003158 c745dd4dab1863d78bf0dd085958a135 179 Pfam PF07700 Haem-NO-binding 2 162 3.8E-39 T 13-10-2018 IPR011644 Heme NO-binding GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 VEA_003158 c745dd4dab1863d78bf0dd085958a135 179 Gene3D G3DSA:3.90.1520.10 1 178 6.3E-57 T 13-10-2018 IPR038158 H-NOX domain superfamily GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 VEA_001141 d2575dd22462ac6f493777d31204bc83 382 Pfam PF01594 AI-2E family transporter 24 347 7.4E-33 T 13-10-2018 IPR002549 Transmembrane protein TqsA-like VEA_003311 c074eee7f1221b65d274ce33da5115c7 70 Pfam PF07869 Protein of unknown function (DUF1656) 7 61 3.8E-15 T 13-10-2018 IPR012451 Protein of unknown function DUF1656 VEA_003779 8f409c1eb060e83383e48f0d7837905d 219 Pfam PF11140 Protein of unknown function (DUF2913) 3 214 2.2E-85 T 13-10-2018 IPR021316 Protein of unknown function DUF2913 VEA_004231 12ddb5ab1caa53a2b86670b26e7100d2 205 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 16 195 1.9E-35 T 13-10-2018 IPR003740 Uncharacterised membrane protein YitT VEA_002074 2622d19f9880fdc6da645640c8da78fa 267 Pfam PF00899 ThiF family 20 261 8.3E-56 T 13-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VEA_002074 2622d19f9880fdc6da645640c8da78fa 267 SUPERFAMILY SSF69572 12 264 3.27E-70 T 13-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 VEA_002074 2622d19f9880fdc6da645640c8da78fa 267 Gene3D G3DSA:3.40.50.720 12 267 9.1E-81 T 13-10-2018 VEA_003117 f56dab9379932264ba3fff06799c4b5f 323 Pfam PF03916 Polysulphide reductase, NrfD 6 322 1.8E-79 T 13-10-2018 IPR005614 NrfD family VEA_003117 f56dab9379932264ba3fff06799c4b5f 323 TIGRFAM TIGR03148 cyt_nit_nrfD: cytochrome c nitrite reductase, NrfD subunit 6 323 1.6E-147 T 13-10-2018 IPR017566 NrfD VEA_003511 dd7a1a6f6c35469efb19bdbfba153b62 264 Pfam PF03942 DTW domain 45 236 2.0E-40 T 13-10-2018 IPR005636 DTW VEA_003511 dd7a1a6f6c35469efb19bdbfba153b62 264 SMART SM01144 42 242 9.4E-62 T 13-10-2018 IPR005636 DTW VEA_001366 290f78a96617db67af9874ba62376046 323 Pfam PF03824 High-affinity nickel-transport protein 1 318 7.9E-36 T 13-10-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 VEA_003914 b2b30adbea24e04cc92b4e1d621ba0a7 354 Pfam PF06519 TolA C-terminal 254 352 1.6E-31 T 13-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 VEA_003914 b2b30adbea24e04cc92b4e1d621ba0a7 354 TIGRFAM TIGR02794 tolA_full: protein TolA 13 353 2.6E-92 T 13-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 VEA_003914 b2b30adbea24e04cc92b4e1d621ba0a7 354 SUPERFAMILY SSF74653 263 353 1.26E-16 T 13-10-2018 VEA_003914 b2b30adbea24e04cc92b4e1d621ba0a7 354 Gene3D G3DSA:3.30.1150.10 254 353 5.0E-26 T 13-10-2018 VEA_001146 26466e8f3d22a34ecc532228e2324ec2 724 Pfam PF04632 Fusaric acid resistance protein family 6 524 2.6E-41 T 13-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 VEA_004049 b9ff59260eed73d92582ffbb8a5087c1 224 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 28 180 1.4E-28 T 13-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VEA_000574 9962eb4b0a936e28be86c8e403c0f95a 147 Pfam PF11911 Protein of unknown function (DUF3429) 5 145 9.9E-27 T 13-10-2018 IPR021836 Protein of unknown function DUF3429 VEA_004192 5f15a40b18d919e14ae2f39514dafde1 290 Pfam PF01963 TraB family 26 279 1.2E-52 T 13-10-2018 IPR002816 Pheromone shutdown, TraB VEA_000131 31a7c24ff8d9e893fbaa244c10556b64 373 SUPERFAMILY SSF56925 217 342 5.76E-5 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VEA_000131 31a7c24ff8d9e893fbaa244c10556b64 373 Pfam PF13729 F plasmid transfer operon, TraF, protein 49 289 2.5E-64 T 13-10-2018 IPR032811 Putative conjugal transfer protein TraF-related VEA_001957 3440538f7c593c8abc59083679965176 203 Pfam PF01081 KDPG and KHG aldolase 5 197 4.9E-73 T 13-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VEA_001957 3440538f7c593c8abc59083679965176 203 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 13-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VEA_001957 3440538f7c593c8abc59083679965176 203 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 5 202 5.5E-83 T 13-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VEA_001957 3440538f7c593c8abc59083679965176 203 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 13-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VEA_001957 3440538f7c593c8abc59083679965176 203 Gene3D G3DSA:3.20.20.70 1 203 7.4E-74 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VEA_001957 3440538f7c593c8abc59083679965176 203 SUPERFAMILY SSF51569 3 201 1.06E-66 T 13-10-2018 VEA_002122 4b169a77c439fa69f028c059ab00f178 335 SUPERFAMILY SSF53474 42 324 5.0E-44 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_002122 4b169a77c439fa69f028c059ab00f178 335 Gene3D G3DSA:3.40.50.1820 29 328 1.8E-50 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_002122 4b169a77c439fa69f028c059ab00f178 335 Pfam PF12146 Serine aminopeptidase, S33 53 310 1.6E-59 T 13-10-2018 IPR022742 Serine aminopeptidase, S33 VEA_000913 7b92b1bd57d287809bec84381c105545 590 Gene3D G3DSA:1.20.1730.10 21 509 6.5E-81 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily VEA_000913 7b92b1bd57d287809bec84381c105545 590 Pfam PF00474 Sodium:solute symporter family 33 422 5.1E-36 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VEA_000965 ecb8601386032504d839c210f35a0d6a 123 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 73 4.0E-15 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_000965 ecb8601386032504d839c210f35a0d6a 123 SUPERFAMILY SSF46785 1 82 1.01E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000965 ecb8601386032504d839c210f35a0d6a 123 Gene3D G3DSA:1.10.10.10 7 121 3.7E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_000965 ecb8601386032504d839c210f35a0d6a 123 SMART SM00345 14 73 1.1E-12 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VEA_000200 ea01549925d710a5de4166dafc801f3e 200 PIRSF PIRSF011489 1 196 4.3E-81 T 13-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 VEA_000200 ea01549925d710a5de4166dafc801f3e 200 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 185 7.2E-28 T 13-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 VEA_000294 f602bbf12183b8d005ea3202df2ad549 196 SUPERFAMILY SSF140478 25 183 5.23E-54 T 13-10-2018 IPR023353 LemA-like domain superfamily VEA_000294 f602bbf12183b8d005ea3202df2ad549 196 Pfam PF04011 LemA family 7 196 7.8E-67 T 13-10-2018 IPR007156 LemA VEA_000294 f602bbf12183b8d005ea3202df2ad549 196 Gene3D G3DSA:1.20.1440.20 15 196 2.1E-61 T 13-10-2018 IPR023353 LemA-like domain superfamily VEA_000766 bf213a6739e4cdc8ff85bb33eb2d5f73 336 SUPERFAMILY SSF53850 27 326 3.57E-62 T 13-10-2018 VEA_000766 bf213a6739e4cdc8ff85bb33eb2d5f73 336 TIGRFAM TIGR03261 phnS2: putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein 6 333 9.8E-159 T 13-10-2018 IPR017663 ABC transport system, 1-aminoethylphosphonate-binding protein, putative VEA_000766 bf213a6739e4cdc8ff85bb33eb2d5f73 336 Pfam PF13343 Bacterial extracellular solute-binding protein 75 293 9.3E-26 T 13-10-2018 VEA_000766 bf213a6739e4cdc8ff85bb33eb2d5f73 336 Gene3D G3DSA:3.40.190.10 133 311 9.2E-78 T 13-10-2018 VEA_000766 bf213a6739e4cdc8ff85bb33eb2d5f73 336 PIRSF PIRSF002825 2 329 1.4E-78 T 13-10-2018 IPR026045 Ferric binding protein VEA_000766 bf213a6739e4cdc8ff85bb33eb2d5f73 336 Gene3D G3DSA:3.40.190.10 30 297 9.2E-78 T 13-10-2018 VEA_000244 f1127bd2707b2ee42e02fcb57c8ee08b 334 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 176 4.6E-28 T 13-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase VEA_004259 c16a6b2bc65002048b2ffa8386e8ced7 168 SUPERFAMILY SSF101307 9 161 1.7E-48 T 13-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 VEA_004259 c16a6b2bc65002048b2ffa8386e8ced7 168 Pfam PF04608 Phosphatidylglycerophosphatase A 15 159 1.1E-52 T 13-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 VEA_004259 c16a6b2bc65002048b2ffa8386e8ced7 168 PIRSF PIRSF006162 6 167 5.3E-54 T 13-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 VEA_000682 e37befff09938eefa620c5997875a293 264 SUPERFAMILY SSF56112 10 193 1.7E-16 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily VEA_000682 e37befff09938eefa620c5997875a293 264 Pfam PF01636 Phosphotransferase enzyme family 45 186 3.8E-6 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase VEA_001346 89f1a6d5211386f0a22aa767924175b5 199 Gene3D G3DSA:3.80.10.10 26 195 2.1E-5 T 13-10-2018 IPR032675 Leucine-rich repeat domain superfamily VEA_002617 880cf9daa79b8e6cd6be1321c2cfca09 296 Pfam PF01136 Peptidase family U32 87 241 2.9E-12 T 13-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VEA_000087 a7a42ec44e8da41a1cd7a11b41c330e0 420 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 51 419 1.4E-111 T 13-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VEA_000087 a7a42ec44e8da41a1cd7a11b41c330e0 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 112 132 2.2E-39 T 13-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VEA_000087 a7a42ec44e8da41a1cd7a11b41c330e0 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 344 365 2.2E-39 T 13-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VEA_000087 a7a42ec44e8da41a1cd7a11b41c330e0 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 201 219 2.2E-39 T 13-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VEA_000087 a7a42ec44e8da41a1cd7a11b41c330e0 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 291 317 2.2E-39 T 13-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VEA_000087 a7a42ec44e8da41a1cd7a11b41c330e0 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 81 102 2.2E-39 T 13-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VEA_000087 a7a42ec44e8da41a1cd7a11b41c330e0 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 242 267 2.2E-39 T 13-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VEA_000087 a7a42ec44e8da41a1cd7a11b41c330e0 420 SUPERFAMILY SSF55035 146 261 9.55E-37 T 13-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VEA_000087 a7a42ec44e8da41a1cd7a11b41c330e0 420 Gene3D G3DSA:3.90.770.10 92 405 5.8E-109 T 13-10-2018 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamily GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VEA_000087 a7a42ec44e8da41a1cd7a11b41c330e0 420 Gene3D G3DSA:3.30.70.420 146 261 5.8E-109 T 13-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VEA_000087 a7a42ec44e8da41a1cd7a11b41c330e0 420 SUPERFAMILY SSF56542 26 409 5.62E-78 T 13-10-2018 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamily GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VEA_000087 a7a42ec44e8da41a1cd7a11b41c330e0 420 ProSitePatterns PS00318 Hydroxymethylglutaryl-coenzyme A reductases signature 2. 356 363 - T 13-10-2018 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VEA_000689 c554c12d55fc7c2fa85f54c6b2981529 258 Pfam PF06629 MltA-interacting protein MipA 41 258 5.7E-40 T 13-10-2018 IPR010583 MltA-interacting MipA VEA_001123 bf71c6693ea20038b4f850bb74f5567b 290 SUPERFAMILY SSF52151 4 227 1.78E-32 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VEA_001123 bf71c6693ea20038b4f850bb74f5567b 290 Gene3D G3DSA:3.40.1090.10 2 93 1.5E-9 T 13-10-2018 VEA_001123 bf71c6693ea20038b4f850bb74f5567b 290 Pfam PF01734 Patatin-like phospholipase 7 170 5.5E-13 T 13-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 VEA_002589 14d6c55faffea7c73ac934a9176e38df 361 Pfam PF01594 AI-2E family transporter 14 347 6.3E-53 T 13-10-2018 IPR002549 Transmembrane protein TqsA-like VEA_000348 203cae971f167fa8066747262206fcc2 172 Pfam PF13590 Domain of unknown function (DUF4136) 20 169 2.1E-24 T 13-10-2018 IPR025411 Domain of unknown function DUF4136 VEA_000348 203cae971f167fa8066747262206fcc2 172 Gene3D G3DSA:3.30.160.670 10 171 4.6E-25 T 13-10-2018 VEA_000699 fcb66aac1c85ecd074849fbfde726d19 217 Pfam PF00857 Isochorismatase family 10 208 4.9E-32 T 13-10-2018 IPR000868 Isochorismatase-like GO:0003824 VEA_000699 fcb66aac1c85ecd074849fbfde726d19 217 SUPERFAMILY SSF52499 4 212 8.24E-27 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 VEA_000699 fcb66aac1c85ecd074849fbfde726d19 217 Gene3D G3DSA:3.40.50.850 7 212 1.0E-35 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 VEA_002023 c8879c1b5e1fc5d05c468a095d0ec7b2 112 Pfam PF03899 ATP synthase I chain 2 94 2.0E-20 T 13-10-2018 IPR005598 ATP synthase protein I VEA_003195 868414640eb666243a9b5a200c49a3fe 243 Pfam PF11185 Protein of unknown function (DUF2971) 75 166 2.4E-4 T 13-10-2018 IPR021352 Protein of unknown function DUF2971 VEA_003543 8096432c82ca7208d56f0729446ed9c8 212 Pfam PF02397 Bacterial sugar transferase 14 207 5.3E-62 T 13-10-2018 IPR003362 Bacterial sugar transferase VEA_000044 5634233a11d4eae8ac5558f281345fda 491 Pfam PF03606 C4-dicarboxylate anaerobic carrier 1 486 4.3E-137 T 13-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 VEA_000968 940eee4cab141a0610ccc2ddbd14ee9d 361 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 6 360 9.2E-123 T 13-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 VEA_000968 940eee4cab141a0610ccc2ddbd14ee9d 361 Pfam PF03616 Sodium/glutamate symporter 3 329 4.4E-134 T 13-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 VEA_000476 4f21e04a0552db5d766e4040804b2dab 137 Gene3D G3DSA:1.10.260.40 2 66 7.5E-6 T 13-10-2018 VEA_000476 4f21e04a0552db5d766e4040804b2dab 137 SUPERFAMILY SSF47413 2 61 7.5E-6 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VEA_001752 8d029443a340e1d856fed1afc0ce55e7 80 Pfam PF06005 Cell division protein ZapB 1 78 1.4E-25 T 13-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 VEA_001752 8d029443a340e1d856fed1afc0ce55e7 80 Gene3D G3DSA:1.20.5.340 1 79 1.5E-29 T 13-10-2018 VEA_001752 8d029443a340e1d856fed1afc0ce55e7 80 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 18.126 T 13-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 VEA_000594 95c2e9843ffa5bf06f0880b5c8e49123 103 Pfam PF05036 Sporulation related domain 12 87 3.3E-13 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 VEA_000594 95c2e9843ffa5bf06f0880b5c8e49123 103 SUPERFAMILY SSF110997 12 77 6.41E-6 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VEA_000594 95c2e9843ffa5bf06f0880b5c8e49123 103 Gene3D G3DSA:3.30.70.1070 2 94 3.1E-20 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VEA_000507 9a8cde622c192dbc6bf79a8bdc4a6c56 277 PIRSF PIRSF028200 2 277 3.6E-92 T 13-10-2018 IPR016875 Uncharacterised conserved protein UCP028200 VEA_001533 ce6041717da1925bc4e13675a2c81544 278 Gene3D G3DSA:3.60.110.10 2 273 1.7E-59 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VEA_001533 ce6041717da1925bc4e13675a2c81544 278 Pfam PF00795 Carbon-nitrogen hydrolase 6 255 2.4E-31 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 VEA_001533 ce6041717da1925bc4e13675a2c81544 278 SUPERFAMILY SSF56317 1 264 1.28E-57 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VEA_002524 4ab2decbc77391936a3e5def56f157fa 85 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 85 35.276 T 13-10-2018 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3 VEA_002524 4ab2decbc77391936a3e5def56f157fa 85 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 5 81 1.3E-20 T 13-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 VEA_002524 4ab2decbc77391936a3e5def56f157fa 85 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 10 80 1.8E-19 T 13-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 VEA_002633 044aea1a9900846dce5e65b9ddd7b2f3 179 Pfam PF10144 Bacterial virulence factor haemolysin 2 129 5.1E-36 T 13-10-2018 IPR019305 Uncharacterised protein family Smp VEA_001579 bf25421604beb6405939521fc03745f6 437 Pfam PF02321 Outer membrane efflux protein 233 414 2.5E-26 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VEA_001579 bf25421604beb6405939521fc03745f6 437 Pfam PF02321 Outer membrane efflux protein 24 213 1.7E-25 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VEA_001579 bf25421604beb6405939521fc03745f6 437 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 21 432 1.2E-107 T 13-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 VEA_001579 bf25421604beb6405939521fc03745f6 437 SUPERFAMILY SSF56954 6 421 3.01E-87 T 13-10-2018 VEA_001579 bf25421604beb6405939521fc03745f6 437 Gene3D G3DSA:1.20.1600.10 22 430 3.1E-81 T 13-10-2018 VEA_003532 c4b880ac293a7a51eb6026338803ea54 126 Pfam PF01627 Hpt domain 34 108 1.9E-11 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VEA_003532 c4b880ac293a7a51eb6026338803ea54 126 Gene3D G3DSA:1.20.120.160 5 119 8.0E-20 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 VEA_003532 c4b880ac293a7a51eb6026338803ea54 126 SUPERFAMILY SSF47226 10 119 7.07E-22 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 VEA_003966 134b24bb1213426c9f8ad5b4d9da916f 54 Pfam PF10689 Protein of unknown function (DUF2496) 8 50 3.7E-24 T 13-10-2018 IPR019630 Protein of unknown function DUF2496, YbaM-related VEA_001642 415ec7c3b8e147151959be694b7f2745 125 PIRSF PIRSF028299 3 125 8.9E-30 T 13-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 VEA_001642 415ec7c3b8e147151959be694b7f2745 125 Pfam PF11777 Protein of unknown function (DUF3316) 5 118 7.7E-21 T 13-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 VEA_001224 553b98f3fc0f8d7980af257250a40cbe 563 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 4 553 2.0E-103 T 13-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 VEA_001224 553b98f3fc0f8d7980af257250a40cbe 563 Pfam PF02652 L-lactate permease 7 548 1.9E-107 T 13-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 VEA_001376 ca1f62cf09a2cb42260d6c3a98d5aac9 449 Gene3D G3DSA:3.20.20.80 9 379 7.9E-79 T 13-10-2018 VEA_001376 ca1f62cf09a2cb42260d6c3a98d5aac9 449 SMART SM00642 13 374 1.4E-23 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VEA_001376 ca1f62cf09a2cb42260d6c3a98d5aac9 449 SUPERFAMILY SSF51445 10 359 5.16E-63 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily VEA_001376 ca1f62cf09a2cb42260d6c3a98d5aac9 449 PRINTS PR00110 Alpha-amylase signature 230 248 5.2E-16 T 13-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VEA_001376 ca1f62cf09a2cb42260d6c3a98d5aac9 449 PRINTS PR00110 Alpha-amylase signature 88 99 5.2E-16 T 13-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VEA_001376 ca1f62cf09a2cb42260d6c3a98d5aac9 449 PRINTS PR00110 Alpha-amylase signature 55 72 5.2E-16 T 13-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VEA_001376 ca1f62cf09a2cb42260d6c3a98d5aac9 449 PRINTS PR00110 Alpha-amylase signature 201 212 5.2E-16 T 13-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VEA_001376 ca1f62cf09a2cb42260d6c3a98d5aac9 449 PRINTS PR00110 Alpha-amylase signature 296 308 5.2E-16 T 13-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VEA_001376 ca1f62cf09a2cb42260d6c3a98d5aac9 449 Pfam PF00128 Alpha amylase, catalytic domain 28 237 2.9E-17 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VEA_003217 d1edf8998684d63121b70de4807f0011 251 Pfam PF13099 Domain of unknown function (DUF3944) 3 37 2.9E-15 T 13-10-2018 IPR025217 Domain of unknown function DUF3944 VEA_003217 d1edf8998684d63121b70de4807f0011 251 Pfam PF03981 Ubiquinol-cytochrome C chaperone 53 227 1.9E-35 T 13-10-2018 IPR021150 Ubiquinol-cytochrome c chaperone/UPF0174 VEA_003812 753ec8aabf63ea57986a91b4ab12c150 129 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 3 129 5.0E-48 T 13-10-2018 IPR014320 Phage shock protein, PspC VEA_003812 753ec8aabf63ea57986a91b4ab12c150 129 Pfam PF04024 PspC domain 4 62 7.7E-16 T 13-10-2018 IPR007168 Phage shock protein, PspC, N-terminal VEA_002843 ca34bc32f320b3f0d2430f5265a675ea 247 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 228 1.7E-85 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEA_002843 ca34bc32f320b3f0d2430f5265a675ea 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 3.8E-65 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEA_002843 ca34bc32f320b3f0d2430f5265a675ea 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 3.8E-65 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEA_002843 ca34bc32f320b3f0d2430f5265a675ea 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 3.8E-65 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEA_002843 ca34bc32f320b3f0d2430f5265a675ea 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 3.8E-65 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEA_002843 ca34bc32f320b3f0d2430f5265a675ea 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 204 228 3.8E-65 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEA_002843 ca34bc32f320b3f0d2430f5265a675ea 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 3.8E-65 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VEA_002843 ca34bc32f320b3f0d2430f5265a675ea 247 Pfam PF01578 Cytochrome C assembly protein 29 184 1.4E-32 T 13-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VEA_002786 440f309a2aefd730dd35ec43c2c77f41 189 ProSitePatterns PS00201 Flavodoxin signature. 7 23 - T 13-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 VEA_002786 440f309a2aefd730dd35ec43c2c77f41 189 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 4 186 2.1E-39 T 13-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 VEA_002786 440f309a2aefd730dd35ec43c2c77f41 189 SUPERFAMILY SSF52218 4 186 1.09E-55 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VEA_002786 440f309a2aefd730dd35ec43c2c77f41 189 Gene3D G3DSA:3.40.50.360 1 188 1.3E-61 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VEA_002786 440f309a2aefd730dd35ec43c2c77f41 189 Pfam PF03358 NADPH-dependent FMN reductase 13 135 9.5E-12 T 13-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 VEA_003509 eb9663b80d484f61a9c0a2a9bc539f82 88 Pfam PF11173 Protein of unknown function (DUF2960) 1 77 2.4E-36 T 13-10-2018 IPR021343 Protein of unknown function DUF2960 VEA_000643 f89decb4f9de6bea3199411400853690 130 Pfam PF12614 Ribosome recycling factor 4 128 7.5E-55 T 13-10-2018 IPR022253 Ribosome recycling factor. bacterial VEA_002183 b6732a8ba6f482a623f1e7b4a44e2fec 232 PIRSF PIRSF028160 1 232 5.9E-116 T 13-10-2018 IPR016872 Uncharacterised conserved protein UCP028160 VEA_002183 b6732a8ba6f482a623f1e7b4a44e2fec 232 Pfam PF07356 Protein of unknown function (DUF1481) 34 227 3.3E-56 T 13-10-2018 IPR010858 Protein of unknown function DUF1481 VEA_001556 ba3dc90aa2fd90294a94bde798de30bc 103 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 13 87 8.8E-18 T 13-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 VEA_001556 ba3dc90aa2fd90294a94bde798de30bc 103 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 7 101 1.4E-36 T 13-10-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 VEA_003921 f1fe7faf5dc40a8cc16f6cd9f14f190b 528 PIRSF PIRSF006446 1 329 4.5E-116 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 VEA_003921 f1fe7faf5dc40a8cc16f6cd9f14f190b 528 PIRSF PIRSF006446 335 526 5.8E-34 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 VEA_003921 f1fe7faf5dc40a8cc16f6cd9f14f190b 528 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 1.0E-178 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 VEA_001660 f422fe556729eb651f925c2dc148ed86 260 Pfam PF04784 Protein of unknown function, DUF547 88 198 1.5E-22 T 13-10-2018 IPR006869 Domain of unknown function DUF547 VEA_000430 952be685ecbbe079a5de9e1a681f738f 441 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 440 8.1E-154 T 13-10-2018 IPR010263 Type VI secretion protein, VC_A0114 VEA_000430 952be685ecbbe079a5de9e1a681f738f 441 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 439 2.2E-138 T 13-10-2018 IPR010263 Type VI secretion protein, VC_A0114 VEA_001113 4bded5bc335ec71204869db099163977 124 PIRSF PIRSF031804 1 124 4.7E-42 T 13-10-2018 IPR016983 Uncharacterised conserved protein UCP031804 VEA_001113 4bded5bc335ec71204869db099163977 124 Pfam PF06803 Protein of unknown function (DUF1232) 63 98 7.2E-14 T 13-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 VEA_000347 7a574e53851a49bd13eb4fcc09b1600e 226 Pfam PF09335 SNARE associated Golgi protein 55 173 7.9E-18 T 13-10-2018 IPR032816 SNARE associated Golgi protein VEA_003989 87c9f3f1e5c684105dcd6ed7ea36ccbf 169 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 23 164 7.0E-46 T 13-10-2018 IPR018639 Domain of unknown function DUF2062 VEA_001085 797c325e3a76caf40f9abc82182e603d 269 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 67 200 2.5E-42 T 13-10-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 VEA_002927 c071a10d8fb308cff089ca139f443f22 477 Pfam PF03553 Na+/H+ antiporter family 161 453 3.3E-66 T 13-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VEA_002927 c071a10d8fb308cff089ca139f443f22 477 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 7 457 1.9E-163 T 13-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 VEA_003269 ecd59f96c329bf1e98c132a297bb8102 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 2.2E-14 T 13-10-2018 IPR021681 Protein of unknown function DUF3265 VEA_004180 1a4d857fa8561ee85e407ab2711e57c7 212 PIRSF PIRSF028688 1 212 3.2E-118 T 13-10-2018 IPR014549 Flagellar protein FlgO VEA_002558 b9df732beef47553add2cd2cd97a7555 256 Pfam PF01061 ABC-2 type transporter 8 218 5.4E-39 T 13-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 VEA_002558 b9df732beef47553add2cd2cd97a7555 256 PIRSF PIRSF006648 6 253 7.9E-26 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VEA_002558 b9df732beef47553add2cd2cd97a7555 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 1.9E-7 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VEA_002558 b9df732beef47553add2cd2cd97a7555 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 102 127 1.9E-7 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VEA_002558 b9df732beef47553add2cd2cd97a7555 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 1.9E-7 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VEA_002558 b9df732beef47553add2cd2cd97a7555 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 1.9E-7 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VEA_001375 a3c9eac089a21dcd5aaf90c1e66699bf 61 SUPERFAMILY SSF46955 1 56 1.88E-7 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily VEA_001375 a3c9eac089a21dcd5aaf90c1e66699bf 61 Gene3D G3DSA:1.10.1660.10 1 61 1.4E-7 T 13-10-2018 VEA_000983 83afb67bdfa0812b84a118510ff7f8e0 69 SUPERFAMILY SSF46575 1 63 4.58E-5 T 13-10-2018 VEA_000983 83afb67bdfa0812b84a118510ff7f8e0 69 Pfam PF11686 Protein of unknown function (DUF3283) 4 64 1.0E-34 T 13-10-2018 IPR021700 Protein of unknown function DUF3283 VEA_003028 e4590528840fee20f86ebb824a11ab71 548 Pfam PF02470 MlaD protein 160 219 2.2E-7 T 13-10-2018 IPR003399 Mce/MlaD VEA_003028 e4590528840fee20f86ebb824a11ab71 548 Pfam PF02470 MlaD protein 287 391 2.0E-14 T 13-10-2018 IPR003399 Mce/MlaD VEA_003028 e4590528840fee20f86ebb824a11ab71 548 Pfam PF02470 MlaD protein 43 134 1.4E-9 T 13-10-2018 IPR003399 Mce/MlaD VEA_003830 58d93e23b0f53f916c5b0edb7adc748a 286 Gene3D G3DSA:1.20.1080.10 27 280 1.3E-94 T 13-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VEA_003830 58d93e23b0f53f916c5b0edb7adc748a 286 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 82 91 - T 13-10-2018 IPR024002 Formate/nitrite transporter, conserved site VEA_003830 58d93e23b0f53f916c5b0edb7adc748a 286 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 14 278 7.8E-113 T 13-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 VEA_003830 58d93e23b0f53f916c5b0edb7adc748a 286 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 25 279 6.1E-77 T 13-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 VEA_003830 58d93e23b0f53f916c5b0edb7adc748a 286 Pfam PF01226 Formate/nitrite transporter 14 275 8.3E-74 T 13-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 VEA_000257 0c77f34ce87ed2d272e396ce34cd765c 291 Pfam PF00582 Universal stress protein family 154 286 6.2E-7 T 13-10-2018 IPR006016 UspA VEA_000257 0c77f34ce87ed2d272e396ce34cd765c 291 Gene3D G3DSA:3.40.50.12370 5 290 6.2E-23 T 13-10-2018 VEA_000257 0c77f34ce87ed2d272e396ce34cd765c 291 SUPERFAMILY SSF52402 153 287 3.1E-9 T 13-10-2018 VEA_002802 9be8d728e5b944b8f7e7c5ff82276c73 161 Pfam PF11143 Protein of unknown function (DUF2919) 3 147 1.7E-54 T 13-10-2018 IPR021318 Protein of unknown function DUF2919 VEA_001897 797e227608de424b26bb299b49dad598 692 Pfam PF05170 AsmA family 1 572 2.9E-136 T 13-10-2018 IPR007844 AsmA VEA_001216 e130b38f9e5bd598a6d8dee22cee7064 148 Pfam PF05229 Spore Coat Protein U domain 1 145 3.1E-28 T 13-10-2018 IPR007893 Spore coat protein U VEA_001216 e130b38f9e5bd598a6d8dee22cee7064 148 SMART SM00972 88 145 1.8E-4 T 13-10-2018 IPR007893 Spore coat protein U VEA_002316 ff12dd9cc6e3c55e4fdeeead92428193 89 Pfam PF12292 Protein of unknown function (DUF3624) 1 79 1.3E-36 T 13-10-2018 IPR022072 Protein of unknown function DUF3624 VEA_003977 33ea898c3fcaae8996965760ddb60ba1 325 Gene3D G3DSA:2.40.128.140 20 324 5.0E-52 T 13-10-2018 IPR037107 Putative outer membrane protein superfamily VEA_003977 33ea898c3fcaae8996965760ddb60ba1 325 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 28 322 3.5E-81 T 13-10-2018 IPR018707 Protein of unknown function DUF2219 VEA_002052 81c357e01b5b1b776289aa2e9b8c61e7 194 Pfam PF11355 Protein of unknown function (DUF3157) 2 193 1.8E-74 T 13-10-2018 IPR021501 Protein of unknown function DUF3157 VEA_001841 5e1a4488d73f0725f50bd4b8194c6d51 220 Pfam PF11726 Inovirus Gp2 30 218 8.2E-51 T 13-10-2018 VEA_004283 92069a7456c76ff8a7875f90b1c2b619 519 Pfam PF03806 AbgT putative transporter family 19 517 7.1E-211 T 13-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 VEA_000564 4ab1bce68e849ead0b7a2b51290c5225 440 Pfam PF03109 ABC1 family 115 230 4.0E-29 T 13-10-2018 IPR004147 UbiB domain VEA_000564 4ab1bce68e849ead0b7a2b51290c5225 440 SUPERFAMILY SSF56112 98 328 6.8E-17 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily VEA_002301 5cbe498e458accb3d245f44eb5e1ec29 46 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 36 6.3E-7 T 13-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain VEA_002301 5cbe498e458accb3d245f44eb5e1ec29 46 Gene3D G3DSA:1.10.10.1100 1 41 4.0E-9 T 13-10-2018 VEA_004242 73fb17e8f1f944c6061a52de914ba337 181 Pfam PF07348 Syd protein (SUKH-2) 7 178 2.2E-69 T 13-10-2018 IPR009948 Syd GO:0009898 VEA_004242 73fb17e8f1f944c6061a52de914ba337 181 Hamap MF_01104 Protein Syd [syd]. 3 181 35.992 T 13-10-2018 IPR009948 Syd GO:0009898 VEA_004242 73fb17e8f1f944c6061a52de914ba337 181 Gene3D G3DSA:3.40.1580.20 1 181 1.9E-68 T 13-10-2018 IPR038228 Syd superfamily VEA_001161 6a04849dc7c6312ec424afdaa61a1122 157 Pfam PF04982 HPP family 34 146 7.2E-34 T 13-10-2018 IPR007065 HPP VEA_003370 fd81698e78e9c7cf99b3a30f73d64907 125 TIGRFAM TIGR02502 type_III_YscX: type III secretion protein, YscX family 1 125 4.8E-50 T 13-10-2018 IPR012672 Type III secretion system YscX VEA_003370 fd81698e78e9c7cf99b3a30f73d64907 125 Pfam PF09474 Type III secretion system YscX (type_III_YscX) 1 125 3.2E-45 T 13-10-2018 IPR012672 Type III secretion system YscX VEA_000480 8df36301288e4160e136f716888b3628 412 Pfam PF01566 Natural resistance-associated macrophage protein 55 379 2.1E-19 T 13-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 VEA_004220 dd942191327e767f34c9dc65d31071e7 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 5.2E-39 T 13-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS VEA_004220 dd942191327e767f34c9dc65d31071e7 105 SUPERFAMILY SSF81301 5 105 1.49E-38 T 13-10-2018 VEA_004220 dd942191327e767f34c9dc65d31071e7 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 2 105 25.582 T 13-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS VEA_004220 dd942191327e767f34c9dc65d31071e7 105 Gene3D G3DSA:3.30.460.10 3 105 9.3E-38 T 13-10-2018 VEA_004220 dd942191327e767f34c9dc65d31071e7 105 Pfam PF02410 Ribosomal silencing factor during starvation 11 104 3.3E-28 T 13-10-2018 VEA_002878 d045677ab5950dfe6b4cdcda6c33da3a 163 Pfam PF02674 Colicin V production protein 4 142 5.5E-36 T 13-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 VEA_002853 1c1afd401c80fec44fdf88821c293b94 243 Pfam PF11859 Protein of unknown function (DUF3379) 1 240 1.8E-85 T 13-10-2018 IPR021806 Protein of unknown function DUF3379 VEA_001110 3fd6057573b92acc168d4db7da83c541 245 Pfam PF07670 Nucleoside recognition 85 179 7.0E-11 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VEA_004410 9faa70c9377ed221035fdcd44d800880 90 SUPERFAMILY SSF54403 5 56 2.55E-7 T 13-10-2018 VEA_001971 35725ff301400ead7aa78b5a662bf4b5 337 Pfam PF05036 Sporulation related domain 74 142 3.9E-7 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 VEA_004344 037773de3ee2c2e55253a28accc875db 311 SUPERFAMILY SSF55186 141 291 1.36E-14 T 13-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 VEA_004411 11193c51448a3901509fbd7de6e475d6 113 Pfam PF10973 Protein of unknown function (DUF2799) 28 108 1.5E-23 T 13-10-2018 IPR021242 Protein of unknown function DUF2799 VEA_000452 6016defe0ac6386b6f415d3c81352230 1591 Gene3D G3DSA:3.30.1330.60 632 768 5.3E-13 T 13-10-2018 IPR036737 OmpA-like domain superfamily VEA_000452 6016defe0ac6386b6f415d3c81352230 1591 SUPERFAMILY SSF103088 661 765 5.89E-16 T 13-10-2018 IPR036737 OmpA-like domain superfamily VEA_000452 6016defe0ac6386b6f415d3c81352230 1591 Pfam PF00691 OmpA family 663 748 1.3E-12 T 13-10-2018 IPR006665 OmpA-like domain VEA_002911 87c11f5e84f64fccdc19285b0cdd6199 94 Pfam PF07023 Protein of unknown function (DUF1315) 4 83 1.8E-28 T 13-10-2018 IPR009749 Protein of unknown function DUF1315 VEA_003130 8f0fdbc29dce1dcd240c48385111bc40 221 Pfam PF11201 Protein of unknown function (DUF2982) 67 216 7.7E-62 T 13-10-2018 IPR021367 Protein of unknown function DUF2982 VEA_002840 7c1976fd092d013eb64a069e6f44c0fe 165 Pfam PF10975 Protein of unknown function (DUF2802) 69 136 9.7E-23 T 13-10-2018 IPR021244 Protein of unknown function DUF2802 VEA_003982 195407cacc3d14ae3fc8232477cf3e05 423 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 423 40.595 T 13-10-2018 IPR006698 Uncharacterised protein family UPF0229 VEA_003982 195407cacc3d14ae3fc8232477cf3e05 423 Pfam PF04285 Protein of unknown function (DUF444) 3 421 8.2E-188 T 13-10-2018 IPR006698 Uncharacterised protein family UPF0229 VEA_001439 aab40c07d4ae951cdd2ab95e385a2fb8 103 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 2 100 1.6E-22 T 13-10-2018 IPR008407 Branched-chain amino acid transport, AzlD VEA_002118 d70386dc8607fc8c9db89e3f01789f38 516 PIRSF PIRSF028175 1 516 2.2E-304 T 13-10-2018 IPR014540 Uncharacterised conserved protein UCP028175 VEA_001138 81118dd98e559b6c4e0327a3e8e9affe 150 Gene3D G3DSA:3.10.129.10 2 138 3.4E-38 T 13-10-2018 VEA_001138 81118dd98e559b6c4e0327a3e8e9affe 150 SUPERFAMILY SSF54637 4 138 2.92E-33 T 13-10-2018 IPR029069 HotDog domain superfamily VEA_001138 81118dd98e559b6c4e0327a3e8e9affe 150 Pfam PF13279 Thioesterase-like superfamily 16 134 3.0E-20 T 13-10-2018 VEA_001289 b830381f20d6c8620faec7c05f158580 454 Pfam PF02386 Cation transport protein 50 437 1.9E-55 T 13-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 VEA_001289 b830381f20d6c8620faec7c05f158580 454 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 43 426 1.7E-106 T 13-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 VEA_001901 dcfe92af3afd9de01a05873b93eadcce 213 Pfam PF11172 Protein of unknown function (DUF2959) 13 210 1.3E-90 T 13-10-2018 IPR021342 Protein of unknown function DUF2959 VEA_000615 bf650c715d1e9d4a1ba1ab0ea5a424b9 236 SUPERFAMILY SSF55681 4 231 4.37E-45 T 13-10-2018 VEA_000615 bf650c715d1e9d4a1ba1ab0ea5a424b9 236 Gene3D G3DSA:3.30.930.10 3 235 3.1E-42 T 13-10-2018 VEA_000821 79b3fccb8ef7e2f21f575e428e88bc8c 112 Pfam PF04320 Protein with unknown function (DUF469) 11 111 1.5E-32 T 13-10-2018 IPR007416 Protein of unknown function DUF469 VEA_000970 a5ca9910678f0b15fc4a6283e98ded67 128 Pfam PF04134 Protein of unknown function, DUF393 6 112 7.8E-26 T 13-10-2018 IPR007263 Protein of unknown function DUF393 VEA_001098 ace34eaf8bbf75126961316d8696220c 102 Pfam PF00367 phosphotransferase system, EIIB 28 59 5.7E-10 T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VEA_001098 ace34eaf8bbf75126961316d8696220c 102 Gene3D G3DSA:3.30.1360.60 20 101 4.1E-21 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VEA_001098 ace34eaf8bbf75126961316d8696220c 102 SUPERFAMILY SSF55604 25 98 8.76E-19 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VEA_002626 7e701a6da058a9ce82952c3fe1d3cb4f 65 Pfam PF17320 Family of unknown function (DUF5363) 1 44 2.5E-10 T 13-10-2018 IPR035292 Protein of unknown function DUF5363 VEA_001320 f73688c528f2932f009a246adcf066be 417 Pfam PF04932 O-Antigen ligase 185 342 1.8E-12 T 13-10-2018 IPR007016 O-antigen ligase-related VEA_000349 881de34dd4b82df7d91a513a1a26a307 285 Pfam PF04116 Fatty acid hydroxylase superfamily 92 226 3.0E-31 T 13-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 VEA_000086 46d3050c4c8ace1585425ac16b033dd3 522 Pfam PF08811 Protein of unknown function (DUF1800) 43 505 3.6E-87 T 13-10-2018 IPR014917 Protein of unknown function DUF1800 VEA_000073 6d2e219464ac859a83a8206e05e9a0e2 146 Pfam PF13778 Domain of unknown function (DUF4174) 25 136 6.5E-27 T 13-10-2018 IPR025232 Domain of unknown function DUF4174 VEA_001380 f4d54e874f7dd5de1daa0855a29279ad 205 SUPERFAMILY SSF52218 4 180 8.82E-49 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VEA_001380 f4d54e874f7dd5de1daa0855a29279ad 205 Pfam PF02525 Flavodoxin-like fold 4 173 1.2E-44 T 13-10-2018 IPR003680 Flavodoxin-like fold VEA_001380 f4d54e874f7dd5de1daa0855a29279ad 205 Gene3D G3DSA:3.40.50.360 1 181 1.6E-51 T 13-10-2018 IPR029039 Flavoprotein-like superfamily VEA_002896 d3d7925cb235c99d6892ccb724b5f5f4 82 Pfam PF04226 Transglycosylase associated protein 33 81 4.9E-13 T 13-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 VEA_003451 ed236f455fcb8d9eba76a6c8d0d73c43 219 Pfam PF10881 Protein of unknown function (DUF2726) 90 201 3.3E-22 T 13-10-2018 IPR024402 Domain of unknown function DUF2726 VEA_002466 f20dfc337276c01f94d0c534cb922415 265 Pfam PF09955 Predicted integral membrane protein (DUF2189) 82 195 6.0E-28 T 13-10-2018 IPR018692 Predicted integral membrane protein DUF2189 VEA_001079 5f6b9ccf295e0473082d4e5ecded473d 69 Pfam PF13127 Protein of unknown function (DUF3955) 6 64 2.4E-14 T 13-10-2018 IPR025016 Protein of unknown function DUF3955 VEA_001322 98cf7f264a704700b44d25b2b70da80d 269 SUPERFAMILY SSF52540 9 229 4.73E-8 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VEA_001322 98cf7f264a704700b44d25b2b70da80d 269 Pfam PF10364 Putative capsular polysaccharide synthesis protein 120 255 1.5E-48 T 13-10-2018 IPR018831 Uncharacterised protein family NKWYS VEA_000695 1fd3894248964e3f6f315598aac97756 172 Pfam PF05433 Glycine zipper 2TM domain 67 108 3.7E-9 T 13-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 VEA_001669 287c9d96dd9aad0e335210833078ce69 157 Pfam PF12821 Threonine/Serine exporter, ThrE 13 147 8.0E-39 T 13-10-2018 IPR024528 Threonine/Serine exporter, ThrE VEA_002740 1838d3c02469117fcddcd707c6ac3be4 345 Pfam PF12069 Protein of unknown function (DUF3549) 3 339 1.4E-134 T 13-10-2018 IPR021936 Protein of unknown function DUF3549 VEA_000400 8989e4fbb84d25fd62056b14a30863dd 414 Pfam PF13458 Periplasmic binding protein 27 389 1.3E-66 T 13-10-2018 IPR028081 Leucine-binding protein domain VEA_000400 8989e4fbb84d25fd62056b14a30863dd 414 Gene3D G3DSA:3.40.50.2300 152 383 1.2E-92 T 13-10-2018 VEA_000400 8989e4fbb84d25fd62056b14a30863dd 414 SUPERFAMILY SSF53822 25 392 7.06E-54 T 13-10-2018 IPR028082 Periplasmic binding protein-like I VEA_000400 8989e4fbb84d25fd62056b14a30863dd 414 Gene3D G3DSA:3.40.50.2300 29 381 1.2E-92 T 13-10-2018 VEA_003206 ca0bf51301a5aa72e1544549c9464869 113 Pfam PF16105 Domain of unknown function (DUF4823) 1 111 1.6E-39 T 13-10-2018 IPR032248 Protein of unknown function DUF4823 VEA_004458 dd8d02971882eeb3015bcfa52176e337 156 PIRSF PIRSF028680 1 156 5.5E-74 T 13-10-2018 IPR016895 Uncharacterised conserved protein UCP028680 VEA_004458 dd8d02971882eeb3015bcfa52176e337 156 SUPERFAMILY SSF56935 39 149 4.12E-6 T 13-10-2018 VEA_001778 a826750a049e2ae2ed9cefc500f135ab 658 Pfam PF05159 Capsule polysaccharide biosynthesis protein 143 297 9.5E-31 T 13-10-2018 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 VEA_001778 a826750a049e2ae2ed9cefc500f135ab 658 Pfam PF05159 Capsule polysaccharide biosynthesis protein 40 115 2.0E-14 T 13-10-2018 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 VEA_001778 a826750a049e2ae2ed9cefc500f135ab 658 Pfam PF05159 Capsule polysaccharide biosynthesis protein 435 599 1.3E-28 T 13-10-2018 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 VEA_001778 a826750a049e2ae2ed9cefc500f135ab 658 Pfam PF05159 Capsule polysaccharide biosynthesis protein 374 424 5.2E-6 T 13-10-2018 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 VEA_000778 c0bb147c3b644d14ce5cf996bc0c0b2e 432 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 2 432 5.7E-105 T 13-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VEA_000778 c0bb147c3b644d14ce5cf996bc0c0b2e 432 SUPERFAMILY SSF56935 9 432 2.15E-88 T 13-10-2018 VEA_000445 f2d8d33342370d2baaaa9542ac8a1dda 330 Pfam PF09937 Uncharacterized protein conserved in bacteria (DUF2169) 24 302 2.6E-68 T 13-10-2018 IPR018683 Domain of unknown function DUF2169 VEA_001857 a9cd9431f5cc303252fcdc67de253cc5 453 PIRSF PIRSF037714 2 453 3.0E-173 T 13-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein VEA_001857 a9cd9431f5cc303252fcdc67de253cc5 453 Pfam PF01618 MotA/TolQ/ExbB proton channel family 317 434 2.4E-28 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VEA_000614 401784eb89a016483bb40795260e737f 109 Pfam PF13698 Domain of unknown function (DUF4156) 22 106 6.5E-22 T 13-10-2018 IPR025294 Protein of unknown function DUF4156 VEA_003944 2f038c05857052c2212707a1ca794747 92 ProSitePatterns PS01358 Zinc finger RanBP2-type signature. 66 85 - T 13-10-2018 IPR001876 Zinc finger, RanBP2-type VEA_001003 f715dfd0aba2c3ce83c754af4a8e1fc9 236 SUPERFAMILY SSF53187 13 213 1.65E-28 T 13-10-2018 VEA_001003 f715dfd0aba2c3ce83c754af4a8e1fc9 236 Gene3D G3DSA:3.40.630.10 1 236 1.7E-60 T 13-10-2018 VEA_001003 f715dfd0aba2c3ce83c754af4a8e1fc9 236 Pfam PF00246 Zinc carboxypeptidase 19 156 2.5E-10 T 13-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 VEA_003461 d977a1add1942af3328a9653295a5895 676 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 139 446 5.3E-82 T 13-10-2018 IPR008766 Replication gene A protein GO:0006260 VEA_002893 abcad3183e20015c5a8fb3dc790d20a1 425 PIRSF PIRSF006054 1 425 6.9E-192 T 13-10-2018 IPR021144 Uncharacterised protein family UPF0597 VEA_002893 abcad3183e20015c5a8fb3dc790d20a1 425 Pfam PF03313 Serine dehydratase alpha chain 126 420 5.5E-51 T 13-10-2018 IPR005130 Serine dehydratase-like, alpha subunit VEA_002893 abcad3183e20015c5a8fb3dc790d20a1 425 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 4 425 34.796 T 13-10-2018 IPR021144 Uncharacterised protein family UPF0597 VEA_000122 b5f4356afed10a06f7e8a774a5ac30d3 330 Pfam PF11557 Solitary outer membrane autotransporter beta-barrel domain 11 329 7.1E-116 T 13-10-2018 IPR021621 Solitary outer membrane autotransporter beta-barrel domain VEA_003625 a5459423e793cfead7c0b546b710c21d 458 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 441 2.0E-151 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEA_003625 a5459423e793cfead7c0b546b710c21d 458 Pfam PF01235 Sodium:alanine symporter family 54 450 4.3E-138 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEA_003625 a5459423e793cfead7c0b546b710c21d 458 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 92 107 - T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEA_003625 a5459423e793cfead7c0b546b710c21d 458 PRINTS PR00175 Sodium/alanine symporter signature 212 231 2.7E-52 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEA_003625 a5459423e793cfead7c0b546b710c21d 458 PRINTS PR00175 Sodium/alanine symporter signature 184 202 2.7E-52 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEA_003625 a5459423e793cfead7c0b546b710c21d 458 PRINTS PR00175 Sodium/alanine symporter signature 92 114 2.7E-52 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEA_003625 a5459423e793cfead7c0b546b710c21d 458 PRINTS PR00175 Sodium/alanine symporter signature 307 325 2.7E-52 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEA_003625 a5459423e793cfead7c0b546b710c21d 458 PRINTS PR00175 Sodium/alanine symporter signature 353 375 2.7E-52 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEA_003625 a5459423e793cfead7c0b546b710c21d 458 PRINTS PR00175 Sodium/alanine symporter signature 412 432 2.7E-52 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VEA_002682 c8696eaeee3008b99afa7884bc4aa645 324 Gene3D G3DSA:1.50.10.150 5 318 4.2E-45 T 13-10-2018 IPR038665 Voltage-dependent anion channel superfamily VEA_002682 c8696eaeee3008b99afa7884bc4aa645 324 Pfam PF03595 Voltage-dependent anion channel 19 306 2.3E-31 T 13-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 VEA_001858 94a392e5b8b598b857ba4347def8c5d5 175 Pfam PF01618 MotA/TolQ/ExbB proton channel family 51 168 1.2E-20 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VEA_003199 5cf1b8ee0a48622bf05b519d4b418ac6 95 Gene3D G3DSA:3.10.180.10 1 95 1.6E-15 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEA_003199 5cf1b8ee0a48622bf05b519d4b418ac6 95 SUPERFAMILY SSF54593 6 91 2.13E-7 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VEA_000344 b8ec797b70961fb55867a3d12364f9e6 174 Pfam PF13645 L,D-transpeptidase catalytic domain 11 172 3.4E-66 T 13-10-2018 IPR032676 Putative L,D-transpeptidase tautomerase VEA_003288 c36e8a4f212bc8fb52662f31e606fe4b 514 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 119 369 2.0E-83 T 13-10-2018 IPR008766 Replication gene A protein GO:0006260 VEA_001847 394c985bfd3f7ab1fdc37df141166518 328 Pfam PF13280 WYL domain 160 312 4.1E-18 T 13-10-2018 IPR026881 WYL domain VEA_003245 92b27a63311f3f2fc96451f6681daa14 96 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 16 60 7.3E-13 T 13-10-2018 IPR010260 DNA-binding transcriptional activator AlpA VEA_003434 75f9d8e4ec3b0635a0c5f2cb63fa7445 79 Pfam PF11197 Protein of unknown function (DUF2835) 11 77 1.4E-28 T 13-10-2018 IPR021363 Protein of unknown function DUF2835 VEA_003577 96d24fbb79475e01fad17f91800b9402 256 Pfam PF03741 Integral membrane protein TerC family 16 203 2.0E-44 T 13-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 VEA_003316 4fc215c361192977d72007528f6b3000 362 Pfam PF12698 ABC-2 family transporter protein 2 343 8.1E-37 T 13-10-2018 VEA_000318 3829099b80bbf8cf8d03105ff96b824c 334 SUPERFAMILY SSF53822 32 296 1.81E-39 T 13-10-2018 IPR028082 Periplasmic binding protein-like I VEA_000318 3829099b80bbf8cf8d03105ff96b824c 334 Gene3D G3DSA:3.40.50.2300 33 302 4.8E-119 T 13-10-2018 VEA_000318 3829099b80bbf8cf8d03105ff96b824c 334 Gene3D G3DSA:3.40.50.2300 140 326 4.8E-119 T 13-10-2018 VEA_000318 3829099b80bbf8cf8d03105ff96b824c 334 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 31 323 3.9E-33 T 13-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain VEA_000318 3829099b80bbf8cf8d03105ff96b824c 334 TIGRFAM TIGR02955 TMAO_TorT: TMAO reductase system periplasmic protein TorT 32 330 2.1E-132 T 13-10-2018 IPR014301 TMAO reductase system, periplasmic protein TorT VEA_003243 c49a985ed6864f785db785077fcd8be7 443 Pfam PF03432 Relaxase/Mobilisation nuclease domain 75 249 1.5E-17 T 13-10-2018 IPR005094 Endonuclease relaxase, MobA/VirD2 VEA_000413 34cb28ad81e3b62d6c81070d063784b9 97 Pfam PF03334 Na+/H+ antiporter subunit 8 86 4.0E-24 T 13-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 VEA_000413 34cb28ad81e3b62d6c81070d063784b9 97 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 8 94 4.6E-26 T 13-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 VEA_000898 db21c1d76dbe1b6222e5296b109817f4 255 SUPERFAMILY SSF46785 97 154 1.01E-5 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_003383 10fd253b49ee2a27bfb058f36adc3b8e 164 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 20 155 8.0E-17 T 13-10-2018 IPR009936 Protein of unknown function DUF1468 VEA_003226 1d9173d09a55f59cd2623ca0c1f305e7 40 Pfam PF11665 Protein of unknown function (DUF3265) 13 40 6.0E-16 T 13-10-2018 IPR021681 Protein of unknown function DUF3265 VEA_000081 b29cd683572cdfcc0491cea3a9b74c4e 129 Pfam PF11756 Nitrous oxide-stimulated promoter 8 111 1.3E-46 T 13-10-2018 IPR020483 Uncharacterised protein family YgbA VEA_000081 b29cd683572cdfcc0491cea3a9b74c4e 129 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 8 101 2.0E-47 T 13-10-2018 IPR020483 Uncharacterised protein family YgbA VEA_000271 3b9372f228271a9aabe107a15e508003 152 Pfam PF00293 NUDIX domain 12 122 2.0E-18 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VEA_000271 3b9372f228271a9aabe107a15e508003 152 Gene3D G3DSA:3.90.79.10 4 136 1.1E-24 T 13-10-2018 VEA_000271 3b9372f228271a9aabe107a15e508003 152 SUPERFAMILY SSF55811 11 139 1.35E-24 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VEA_001786 9677e7208d5c439df429c1f5680c8a62 420 Pfam PF05159 Capsule polysaccharide biosynthesis protein 115 402 2.8E-21 T 13-10-2018 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 VEA_000996 201c868cf7c14363d91dbdb93303a5a0 559 Pfam PF03961 Flagellar Assembly Protein A 81 545 1.6E-124 T 13-10-2018 IPR005646 Flagellar assembly protein A VEA_001219 c8c2c33b94ea73a4d081b1ac61785d0e 323 Pfam PF05229 Spore Coat Protein U domain 21 157 5.2E-13 T 13-10-2018 IPR007893 Spore coat protein U VEA_001219 c8c2c33b94ea73a4d081b1ac61785d0e 323 Pfam PF05229 Spore Coat Protein U domain 183 319 6.5E-31 T 13-10-2018 IPR007893 Spore coat protein U VEA_001219 c8c2c33b94ea73a4d081b1ac61785d0e 323 SMART SM00972 94 158 3.5E-8 T 13-10-2018 IPR007893 Spore coat protein U VEA_001219 c8c2c33b94ea73a4d081b1ac61785d0e 323 SMART SM00972 254 320 6.2E-8 T 13-10-2018 IPR007893 Spore coat protein U VEA_000262 1740aa0911312c1a311a7d1e9f1ea3dd 91 Pfam PF03206 Nitrogen fixation protein NifW 7 72 1.8E-5 T 13-10-2018 IPR004893 Nitrogen fixation protein NifW GO:0009399 VEA_003823 af0c19a50f39cf0618e347d95f5cce45 404 Pfam PF11449 Putative, 10TM heavy-metal exporter 40 402 1.9E-164 T 13-10-2018 IPR021552 Putative, 10TM heavy-metal exporter VEA_004140 0e1dc644ab09dd1d6974d75e65fb318f 251 Pfam PF01925 Sulfite exporter TauE/SafE 10 249 1.2E-35 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VEA_003938 cc509cb6a018d4e46101aba8ff5b0113 261 Pfam PF02698 DUF218 domain 80 242 3.2E-28 T 13-10-2018 IPR003848 Domain of unknown function DUF218 VEA_001834 68229bad9cf0f47cda67bc656407fc33 62 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 4 52 7.1E-17 T 13-10-2018 IPR010260 DNA-binding transcriptional activator AlpA VEA_003538 faf6e2231fc526cee5cbd55b19cdf266 454 Pfam PF04932 O-Antigen ligase 241 377 3.8E-19 T 13-10-2018 IPR007016 O-antigen ligase-related VEA_000153 aad487a7d19210018eb262d994218420 95 Pfam PF11782 Protein of unknown function (DUF3319) 1 56 1.4E-26 T 13-10-2018 IPR021753 Protein of unknown function DUF3319 VEA_000308 ea60f431c3def84c982e57dd61cbbfa9 320 Pfam PF01882 Protein of unknown function DUF58 58 143 4.9E-20 T 13-10-2018 IPR002881 Domain of unknown function DUF58 VEA_000804 38d29cf845a56f7cca8ae9d0010a9caa 203 Pfam PF11140 Protein of unknown function (DUF2913) 13 193 4.3E-47 T 13-10-2018 IPR021316 Protein of unknown function DUF2913 VEA_001791 2984e2edccc67e4dd2960d182caa4dc2 731 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 33 716 1.2E-249 T 13-10-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH VEA_004250 4937fea5762282c759cd25cda2476b97 132 Pfam PF04241 Protein of unknown function (DUF423) 20 110 5.2E-29 T 13-10-2018 IPR006696 Protein of unknown function DUF423 VEA_003137 207a87eab021802c5af6814a361889d7 167 Gene3D G3DSA:1.10.10.10 4 149 6.2E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VEA_003137 207a87eab021802c5af6814a361889d7 167 Pfam PF01047 MarR family 40 98 2.4E-15 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEA_003137 207a87eab021802c5af6814a361889d7 167 SMART SM00347 33 133 1.3E-18 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VEA_003137 207a87eab021802c5af6814a361889d7 167 SUPERFAMILY SSF46785 4 150 8.81E-31 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VEA_000102 e4582ab50161de9c3c2658d566a07038 139 Pfam PF04143 Sulphur transport 5 126 3.4E-10 T 13-10-2018 IPR007272 Sulphur transport domain VEA_001484 ac9c3c6e138444d8ca95753815034e61 80 Pfam PF14375 Cysteine-rich CWC 31 75 2.6E-7 T 13-10-2018 IPR032720 Cysteine-rich CWC VEA_000191 87603090aeffa8235b8ca4947316d9df 160 Pfam PF06496 Protein of unknown function (DUF1097) 9 141 5.6E-37 T 13-10-2018 IPR009476 Protein of unknown function DUF1097 VEA_000841 071b85f179c3a1075c7c4dbc870c84d5 209 Pfam PF16357 Putative PepSY_TM-like 10 209 1.0E-62 T 13-10-2018 IPR032307 Putative PepSY TM-like protein VEA_000179 4e05e9fda6e98e973355fec87131ce97 77 Pfam PF11869 Protein of unknown function (DUF3389) 1 76 1.5E-33 T 13-10-2018 IPR021811 Protein of unknown function DUF3389 VEA_003702 ac6fb23a4c00ef8ed83b3c5cefd55cb4 259 Gene3D G3DSA:3.30.460.10 74 196 1.8E-6 T 13-10-2018 VEA_003702 ac6fb23a4c00ef8ed83b3c5cefd55cb4 259 SUPERFAMILY SSF81301 65 223 1.03E-15 T 13-10-2018 VEA_002130 4b5bb3753057b4977c9f874df1898f5b 109 Gene3D G3DSA:2.40.50.660 32 108 2.1E-7 T 13-10-2018 VEA_002130 4b5bb3753057b4977c9f874df1898f5b 109 Pfam PF10694 Protein of unknown function (DUF2500) 2 105 2.1E-23 T 13-10-2018 IPR019635 Protein of unknown function DUF2500 VEA_002790 650f559bbfc8c0ca967ad4819c063133 357 Pfam PF01594 AI-2E family transporter 20 344 5.5E-75 T 13-10-2018 IPR002549 Transmembrane protein TqsA-like VEA_001779 f0e4984f21ec994bb8a0ca3c333e01f4 509 Pfam PF05159 Capsule polysaccharide biosynthesis protein 243 390 1.2E-17 T 13-10-2018 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 VEA_000817 548ac1148da4a317ca1ebff70006d612 375 Pfam PF13729 F plasmid transfer operon, TraF, protein 47 292 1.9E-63 T 13-10-2018 IPR032811 Putative conjugal transfer protein TraF-related VEA_000143 06a7964132c3d48db3d4dddbd03249fd 114 Pfam PF10734 Protein of unknown function (DUF2523) 37 110 2.7E-5 T 13-10-2018 IPR019670 Protein of unkown function DUF2523 VEA_001771 0f90d03fb4aedcddaddfe1e26f55846e 435 Pfam PF13440 Polysaccharide biosynthesis protein 38 336 9.9E-16 T 13-10-2018 VEA_001354 046750accff275fff05a0920b8d51506 232 Pfam PF01618 MotA/TolQ/ExbB proton channel family 95 194 2.2E-22 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VEA_003283 976e13ea7163823451d3e26def45ccdc 70 Pfam PF13031 Protein of unknown function (DUF3892) 19 66 2.1E-5 T 13-10-2018 IPR024997 Protein of unknown function DUF3892 VEA_000096 25ba5fcca92fa73e4fd56ef97f8b15a2 144 Pfam PF10517 Electron transfer DM13 49 143 1.5E-18 T 13-10-2018 IPR019545 DM13 domain VEA_001037 65f114f166fa7bf992406859dc334e3d 231 PIRSF PIRSF028137 1 231 6.4E-105 T 13-10-2018 IPR016870 Uncharacterised conserved protein UCP028137, membrane VEA_000100 18aa09646863db40b6cc6701dded09dd 61 Pfam PF11127 Protein of unknown function (DUF2892) 2 56 2.5E-13 T 13-10-2018 IPR021309 Protein of unknown function DUF2892 VEA_000571 95bef002d0fa2333677749c6a49c7960 205 SUPERFAMILY SSF53474 3 188 2.92E-15 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold VEA_000468 905f6ce5a1ad592625ec3c14f9a75433 157 Pfam PF08896 Domain of unknown function (DUF1842) 11 125 2.9E-23 T 13-10-2018 IPR014992 Domain of unknown function DUF1842 VEA_004178 492adf568cb067fc78d9fe5da0fd1ae1 141 Pfam PF05130 FlgN protein 2 131 1.8E-25 T 13-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 VEA_004178 492adf568cb067fc78d9fe5da0fd1ae1 141 SUPERFAMILY SSF140566 1 113 4.84E-23 T 13-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 VEA_004178 492adf568cb067fc78d9fe5da0fd1ae1 141 Gene3D G3DSA:1.20.58.300 1 113 4.0E-8 T 13-10-2018 VEA_000196 2cac7801e981189d58fbf3520cd6a60a 80 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 2 75 6.8E-29 T 13-10-2018 IPR018680 Protein of unknown function DUF2164 VEA_002984 d5eaff8140c3bf1df03e4dae17bcc44b 695 Pfam PF05170 AsmA family 1 585 3.1E-119 T 13-10-2018 IPR007844 AsmA VEA_003504 6419952152d18fb3c31fbb810acb858a 272 Pfam PF12849 PBP superfamily domain 31 247 7.4E-31 T 13-10-2018 IPR024370 PBP domain VEA_003504 6419952152d18fb3c31fbb810acb858a 272 SUPERFAMILY SSF53850 29 256 5.7E-33 T 13-10-2018 VEA_003504 6419952152d18fb3c31fbb810acb858a 272 Gene3D G3DSA:3.40.190.10 31 255 5.5E-99 T 13-10-2018 VEA_003504 6419952152d18fb3c31fbb810acb858a 272 Gene3D G3DSA:3.40.190.10 106 218 5.5E-99 T 13-10-2018 VEA_000240 d342e2c5854b4ea9fa51aed095ab7b5d 283 Pfam PF15575 Immunity protein 49 90 273 7.3E-25 T 13-10-2018 IPR029074 Immunity protein 49 VEA_003724 6f55518a77835bbef98e7c0db8df1fc3 241 Pfam PF12119 Protein of unknown function (DUF3581) 1 217 1.1E-99 T 13-10-2018 IPR021974 Protein of unknown function DUF3581 VEA_004119 6406e9bcb67725a14ddcfd629ad5448f 257 Pfam PF08907 Domain of unknown function (DUF1853) 33 200 4.8E-38 T 13-10-2018 IPR015003 Protein of unknown function DUF1853 VEA_002249 c134e0bfb47d2cce86b9ffc88a215e80 471 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 36 467 6.1E-82 T 13-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VEA_002249 c134e0bfb47d2cce86b9ffc88a215e80 471 Pfam PF00939 Sodium:sulfate symporter transmembrane region 10 465 1.9E-48 T 13-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VEA_000960 e8aebf6f71e3bb0698e9a819a0e99196 117 Pfam PF04219 Protein of unknown function, DUF 12 100 1.1E-35 T 13-10-2018 IPR007335 Protein of unknown function DUF413 VEA_001467 e7c9e52009c4bbcb7947f77d674ecf1a 366 SUPERFAMILY SSF56935 7 365 1.37E-8 T 13-10-2018 VEA_001612 c90f22de88a5695b6be74f0d429d342b 227 Pfam PF16537 Type II secretion system protein B 162 221 8.9E-25 T 13-10-2018 IPR032389 Type II secretion system protein B VEA_001610 0814ed9254514e74e2c5f9cb165d701e 102 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 8 101 9.6E-20 T 13-10-2018 IPR016476 SH3 domain protein VEA_002431 bb79ef05e7834da255f5d802a7d6d2be 159 Pfam PF06271 RDD family 9 149 1.3E-22 T 13-10-2018 IPR010432 RDD VEA_000609 adb5e5a3eb6be87250c2b823b4dbcef1 345 Pfam PF14321 Domain of unknown function (DUF4382) 32 209 1.5E-20 T 13-10-2018 IPR025491 Domain of unknown function DUF4382 VEA_002083 2d9437b2f3489122a6dfaa939bf40b18 252 Pfam PF09836 Putative DNA-binding domain 6 94 7.0E-20 T 13-10-2018 IPR018640 Putative DNA-binding domain, bacteria VEA_001364 7e2318e989d1609baeb9e6a7f67880a8 63 Pfam PF02583 Metal-sensitive transcriptional repressor 1 58 9.0E-14 T 13-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 VEA_001364 7e2318e989d1609baeb9e6a7f67880a8 63 Gene3D G3DSA:1.20.58.1000 1 63 9.2E-17 T 13-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily VEA_000674 d7eed4fee0dcf4abfd4a2dc7816d1921 131 Pfam PF09622 Putative integral membrane protein (DUF2391) 14 125 3.0E-12 T 13-10-2018 IPR024464 Protein of unknown function DUF2391 VEA_001691 169c64de0e177b5857b6b29e4629e404 121 Pfam PF10973 Protein of unknown function (DUF2799) 29 112 7.8E-18 T 13-10-2018 IPR021242 Protein of unknown function DUF2799 VEA_004448 b235558daf2f04655ad8317d320cfe3c 61 Pfam PF12065 Protein of unknown function (DUF3545) 1 60 2.0E-25 T 13-10-2018 IPR021932 Protein of unknown function DUF3545 VEA_003557 c344f5fec4689b44b8906ead84f2dd43 210 Pfam PF10816 Domain of unknown function (DUF2760) 87 209 1.0E-54 T 13-10-2018 IPR021212 Domain of unknown function DUF2760 VEA_002883 8c694d2fbf4f4ea3f476e52055996fa5 89 Pfam PF04304 Protein of unknown function (DUF454) 1 77 6.4E-19 T 13-10-2018 IPR007401 Protein of unknown function DUF454 VEA_002647 137b0bd67a6d2df705a68093e5802916 154 Pfam PF07811 TadE-like protein 18 60 4.6E-10 T 13-10-2018 IPR012495 TadE-like VEA_003478 33835957c21557ca100296dcc2ca3938 220 Pfam PF11205 Protein of unknown function (DUF2987) 22 166 1.3E-53 T 13-10-2018 IPR021370 Protein of unknown function DUF2987 VEA_000641 d02434968013ee0f70a2c053bbe9880d 173 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 5 173 1.1E-60 T 13-10-2018 IPR018636 Protein of unknown function DUF2058 VEA_003378 3bf8fa0635378dc483a88d7f78464cfc 334 Pfam PF05844 YopD protein 87 331 4.4E-36 T 13-10-2018 IPR008898 YopD-like VEA_000125 0f1ba483b3ff435092adf3f622ec5633 93 Pfam PF10115 Transcriptional activator HlyU 2 92 1.4E-39 T 13-10-2018 IPR018772 Transcription activator HlyU VEA_004310 334b77b1e71639a92269b70ad9ce1fc1 66 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 4 53 3.8E-21 T 13-10-2018 IPR010260 DNA-binding transcriptional activator AlpA VEA_001906 936ce14b0876e61354697cd2a974728c 193 Pfam PF13511 Domain of unknown function (DUF4124) 15 61 1.1E-11 T 13-10-2018 IPR025392 Domain of unknown function DUF4124 VEA_001056 3560e9874d12d30250a582cb1cfc5347 663 Pfam PF01136 Peptidase family U32 78 293 1.2E-64 T 13-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VEA_001056 3560e9874d12d30250a582cb1cfc5347 663 Pfam PF01136 Peptidase family U32 448 591 3.7E-9 T 13-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VEA_003255 ad0bb87b86cc216d36d9f73ff26c9dc3 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 5.9E-15 T 13-10-2018 IPR021681 Protein of unknown function DUF3265 VEA_000748 e400291f10e13c384f94fb4b7bdca556 280 Pfam PF02698 DUF218 domain 6 133 9.7E-15 T 13-10-2018 IPR003848 Domain of unknown function DUF218 VEA_001699 dbba3f3c361a8b189a791070e3629de1 221 Pfam PF10986 Protein of unknown function (DUF2796) 28 142 1.2E-30 T 13-10-2018 IPR021253 Protein of unknown function DUF2796 VEA_001699 dbba3f3c361a8b189a791070e3629de1 221 Pfam PF10986 Protein of unknown function (DUF2796) 132 216 6.0E-19 T 13-10-2018 IPR021253 Protein of unknown function DUF2796 VEA_001267 a0222502ea4d77a01ec868697b208ca1 548 Pfam PF13584 Oxygen tolerance 17 470 1.4E-78 T 13-10-2018 IPR025738 Aerotolerance-related protein BatD VEA_004320 4d6568ac82f1f81ead62cabe9cf65ede 455 Pfam PF03553 Na+/H+ antiporter family 17 219 5.6E-13 T 13-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VEA_002241 29e804a068b3c815ed0cacfc75b10700 318 SUPERFAMILY SSF64182 5 317 8.5E-46 T 13-10-2018 IPR038763 DHH phosphoesterase superfamily VEA_003717 0c14aaba30702fa2d00c66f7ed9515f7 325 Pfam PF11383 Protein of unknown function (DUF3187) 14 322 2.6E-120 T 13-10-2018 IPR021523 Protein of unknown function DUF3187 VEA_003995 29d6d25149aece415ee72c3d50be9bf3 243 Pfam PF10972 Peptidoglycan-binding protein, CsiV 2 242 1.2E-63 T 13-10-2018 IPR021241 Peptidoglycan-binding protein, CsiV VEA_000384 1e86b3e95f9751d97eec5deae1b36120 106 Pfam PF08895 Domain of unknown function (DUF1840) 1 103 7.7E-33 T 13-10-2018 IPR014991 Protein of unknown function DUF1840