locus-tag class description GT360_00010 PF00308 Bacterial dnaA protein GT360_00010 PF11638 DnaA N-terminal domain GT360_00010 PF08299 Bacterial dnaA protein helix-turn-helix GT360_00015 PF00497 Bacterial extracellular solute-binding proteins, family 3 GT360_00020 PF00528 Binding-protein-dependent transport system inner membrane component GT360_00025 PF00005 ABC transporter GT360_00030 PF00468 Ribosomal protein L34 GT360_00035 PF00825 Ribonuclease P GT360_00050 PF12631 MnmE helical domain GT360_00050 PF10396 GTP-binding protein TrmE N-terminus GT360_00050 PF01926 50S ribosome-binding GTPase GT360_00055 PF00258 Flavodoxin GT360_00065 PF02527 rRNA small subunit methyltransferase G GT360_00070 PF13614 AAA domain GT360_00075 PF17762 HTH domain found in ParB protein GT360_00075 PF02195 ParB-like nuclease domain GT360_00085 PF00119 ATP synthase A chain GT360_00090 PF00137 ATP synthase subunit C GT360_00095 PF00430 ATP synthase B/B' CF(0) GT360_00100 PF00213 ATP synthase delta (OSCP) subunit GT360_00105 PF02874 ATP synthase alpha/beta family, beta-barrel domain GT360_00105 PF00306 ATP synthase alpha/beta chain, C terminal domain GT360_00105 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GT360_00110 PF00231 ATP synthase GT360_00115 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GT360_00115 PF02874 ATP synthase alpha/beta family, beta-barrel domain GT360_00120 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain GT360_00120 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain GT360_00125 PF12804 MobA-like NTP transferase domain GT360_00125 PF00132 Bacterial transferase hexapeptide (six repeats) GT360_00130 PF00528 Binding-protein-dependent transport system inner membrane component GT360_00135 PF00497 Bacterial extracellular solute-binding proteins, family 3 GT360_00140 PF00108 Thiolase, N-terminal domain GT360_00140 PF02803 Thiolase, C-terminal domain GT360_00145 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GT360_00145 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GT360_00145 PF00378 Enoyl-CoA hydratase/isomerase GT360_00150 PF01205 Uncharacterized protein family UPF0029 GT360_00150 PF09186 Domain of unknown function (DUF1949) GT360_00155 PF02386 Cation transport protein GT360_00160 PF12724 Flavodoxin domain GT360_00210 PF00155 Aminotransferase class I and II GT360_00215 PF00128 Alpha amylase, catalytic domain GT360_00220 PF02092 Glycyl-tRNA synthetase beta subunit GT360_00220 PF05746 DALR anticodon binding domain GT360_00230 PF01169 Uncharacterized protein family UPF0016 GT360_00240 PF01206 Sulfurtransferase TusA GT360_00250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_00250 PF03466 LysR substrate binding domain GT360_00255 PF08240 Alcohol dehydrogenase GroES-like domain GT360_00255 PF00107 Zinc-binding dehydrogenase GT360_00260 PF00585 C-terminal regulatory domain of Threonine dehydratase GT360_00260 PF00291 Pyridoxal-phosphate dependent enzyme GT360_00265 PF00920 Dehydratase family GT360_00270 PF01063 Amino-transferase class IV GT360_00280 PF00205 Thiamine pyrophosphate enzyme, central domain GT360_00280 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GT360_00280 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GT360_00285 PF13335 Magnesium chelatase, subunit ChlI C-terminal GT360_00285 PF01078 Magnesium chelatase, subunit ChlI GT360_00300 PF02796 Helix-turn-helix domain of resolvase GT360_00300 PF00239 Resolvase, N terminal domain GT360_00340 PF01553 Acyltransferase GT360_00345 PF01323 DSBA-like thioredoxin domain GT360_00350 PF01636 Phosphotransferase enzyme family GT360_00355 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase GT360_00355 PF13746 4Fe-4S dicluster domain GT360_00355 PF12801 4Fe-4S binding domain GT360_00360 PF06288 Protein of unknown function (DUF1040) GT360_00365 PF07070 SpoOM protein GT360_00370 PF03006 Haemolysin-III related GT360_00380 PF02386 Cation transport protein GT360_00385 PF02254 TrkA-N domain GT360_00385 PF02080 TrkA-C domain GT360_00390 PF01029 NusB family GT360_00390 PF01189 16S rRNA methyltransferase RsmB/F GT360_00395 PF02911 Formyl transferase, C-terminal domain GT360_00395 PF00551 Formyl transferase GT360_00400 PF01327 Polypeptide deformylase GT360_00405 PF01476 LysM domain GT360_00410 PF02481 DNA recombination-mediator protein A GT360_00410 PF17782 DprA winged helix domain GT360_00415 PF04361 Protein of unknown function (DUF494) GT360_00420 PF01396 Topoisomerase DNA binding C4 zinc finger GT360_00425 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain GT360_00425 PF02222 ATP-grasp domain GT360_00430 PF00731 AIR carboxylase GT360_00435 PF01300 Telomere recombination GT360_00445 PF18317 Shikimate 5'-dehydrogenase C-terminal domain GT360_00445 PF08501 Shikimate dehydrogenase substrate binding domain GT360_00445 PF01488 Shikimate / quinate 5-dehydrogenase GT360_00455 PF00132 Bacterial transferase hexapeptide (six repeats) GT360_00490 PF00166 Chaperonin 10 Kd subunit GT360_00495 PF00118 TCP-1/cpn60 chaperonin family GT360_00505 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded GT360_00510 PF06005 Cell division protein ZapB GT360_00515 PF02219 Methylenetetrahydrofolate reductase GT360_00520 PF00696 Amino acid kinase family GT360_00520 PF00742 Homoserine dehydrogenase GT360_00520 PF03447 Homoserine dehydrogenase, NAD binding domain GT360_00525 PF01053 Cys/Met metabolism PLP-dependent enzyme GT360_00530 PF01340 Met Apo-repressor, MetJ GT360_00535 PF00356 Bacterial regulatory proteins, lacI family GT360_00535 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GT360_00540 PF00920 Dehydratase family GT360_00545 PF01202 Shikimate kinase GT360_00550 PF02447 GntP family permease GT360_00555 PF01081 KDPG and KHG aldolase GT360_00565 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GT360_00565 PF07992 Pyridine nucleotide-disulphide oxidoreductase GT360_00570 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ GT360_00575 PF01432 Peptidase family M3 GT360_00590 PF05114 Protein of unknown function (DUF692) GT360_00600 PF00580 UvrD/REP helicase N-terminal domain GT360_00600 PF13361 UvrD-like helicase C-terminal domain GT360_00610 PF01810 LysE type translocator GT360_00615 PF00892 EamA-like transporter family GT360_00620 PF16124 RecQ zinc-binding GT360_00620 PF00570 HRDC domain GT360_00620 PF00271 Helicase conserved C-terminal domain GT360_00620 PF00270 DEAD/DEAH box helicase GT360_00620 PF09382 RQC domain GT360_00630 PF02592 Putative vitamin uptake transporter GT360_00635 PF02541 Ppx/GppA phosphatase family GT360_00640 PF00270 DEAD/DEAH box helicase GT360_00640 PF00271 Helicase conserved C-terminal domain GT360_00645 PF00085 Thioredoxin GT360_00650 PF07498 Rho termination factor, N-terminal domain GT360_00650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GT360_00650 PF07497 Rho termination factor, RNA-binding domain GT360_00660 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase GT360_00665 PF00970 Oxidoreductase FAD-binding domain GT360_00665 PF00111 2Fe-2S iron-sulfur cluster binding domain GT360_00665 PF00175 Oxidoreductase NAD-binding domain GT360_00670 PF00175 Oxidoreductase NAD-binding domain GT360_00720 PF07219 HemY protein N-terminus GT360_00725 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase GT360_00730 PF02602 Uroporphyrinogen-III synthase HemD GT360_00735 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain GT360_00735 PF03900 Porphobilinogen deaminase, C-terminal domain GT360_00740 PF01295 Adenylate cyclase, class-I GT360_00740 PF12633 Adenylate cyclase NT domain GT360_00745 PF01491 Frataxin-like domain GT360_00755 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GT360_00755 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GT360_00760 PF01678 Diaminopimelate epimerase GT360_00770 PF02899 Phage integrase, N-terminal SAM-like domain GT360_00770 PF00589 Phage integrase family GT360_00775 PF13419 Haloacid dehalogenase-like hydrolase GT360_00800 PF12146 Serine aminopeptidase, S33 GT360_00805 PF00563 EAL domain GT360_00805 PF08668 HDOD domain GT360_00810 PF01022 Bacterial regulatory protein, arsR family GT360_00815 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GT360_00815 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GT360_00865 PF01914 MarC family integral membrane protein GT360_00880 PF00448 SRP54-type protein, GTPase domain GT360_00880 PF02881 SRP54-type protein, helical bundle domain GT360_00885 PF00005 ABC transporter GT360_00890 PF18075 FtsX extracellular domain GT360_00895 PF04542 Sigma-70 region 2 GT360_00895 PF04545 Sigma-70, region 4 GT360_00895 PF00140 Sigma-70 factor, region 1.2 GT360_00900 PF00581 Rhodanese-like domain GT360_00905 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease GT360_00905 PF01694 Rhomboid family GT360_00910 PF03748 Flagellar basal body-associated protein FliL GT360_00915 PF04345 Chorismate lyase GT360_00920 PF01040 UbiA prenyltransferase family GT360_00925 PF01553 Acyltransferase GT360_00930 PF00717 Peptidase S24-like GT360_00930 PF01726 LexA DNA binding domain GT360_00935 PF01554 MatE GT360_00940 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GT360_00940 PF07992 Pyridine nucleotide-disulphide oxidoreductase GT360_00945 PF00440 Bacterial regulatory proteins, tetR family GT360_00955 PF05958 tRNA (Uracil-5-)-methyltransferase GT360_00960 PF07715 TonB-dependent Receptor Plug Domain GT360_00960 PF00593 TonB dependent receptor GT360_00970 PF01177 Asp/Glu/Hydantoin racemase GT360_01075 PF03755 YicC-like family, N-terminal region GT360_01075 PF08340 Domain of unknown function (DUF1732) GT360_01080 PF01138 3' exoribonuclease family, domain 1 GT360_01080 PF03725 3' exoribonuclease family, domain 2 GT360_01085 PF00156 Phosphoribosyl transferase domain GT360_01090 PF03279 Bacterial lipid A biosynthesis acyltransferase GT360_01095 PF00440 Bacterial regulatory proteins, tetR family GT360_01100 PF02441 Flavoprotein GT360_01100 PF04127 DNA / pantothenate metabolism flavoprotein GT360_01110 PF12105 SpoU, rRNA methylase, C-terminal GT360_01110 PF00588 SpoU rRNA Methylase family GT360_01115 PF13291 ACT domain GT360_01115 PF02824 TGS domain GT360_01115 PF04607 Region found in RelA / SpoT proteins GT360_01120 PF01192 RNA polymerase Rpb6 GT360_01125 PF00625 Guanylate kinase GT360_01130 PF00860 Permease family GT360_01135 PF00356 Bacterial regulatory proteins, lacI family GT360_01145 PF01263 Aldose 1-epimerase GT360_01150 PF06165 Glycosyltransferase family 36 GT360_01150 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain GT360_01155 PF08402 TOBE domain GT360_01155 PF00005 ABC transporter GT360_01160 PF00232 Glycosyl hydrolase family 1 GT360_01165 PF00528 Binding-protein-dependent transport system inner membrane component GT360_01170 PF00528 Binding-protein-dependent transport system inner membrane component GT360_01180 PF00356 Bacterial regulatory proteins, lacI family GT360_01185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT360_01185 PF00672 HAMP domain GT360_01195 PF03167 Uracil DNA glycosylase superfamily GT360_01200 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GT360_01205 PF04222 Protein of unknown function (DUF416) GT360_01210 PF01595 Cyclin M transmembrane N-terminal domain GT360_01210 PF00571 CBS domain GT360_01215 PF00216 Bacterial DNA-binding protein GT360_01225 PF02844 Phosphoribosylglycinamide synthetase, N domain GT360_01225 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GT360_01225 PF02843 Phosphoribosylglycinamide synthetase, C domain GT360_01235 PF02954 Bacterial regulatory protein, Fis family GT360_01240 PF01207 Dihydrouridine synthase (Dus) GT360_01250 PF02785 Biotin carboxylase C-terminal domain GT360_01250 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GT360_01250 PF00289 Biotin carboxylase, N-terminal domain GT360_01255 PF00364 Biotin-requiring enzyme GT360_01260 PF01220 Dehydroquinase class II GT360_01270 PF01565 FAD binding domain GT360_01270 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain GT360_01275 PF02237 Biotin protein ligase C terminal domain GT360_01275 PF03099 Biotin/lipoate A/B protein ligase family GT360_01275 PF08279 HTH domain GT360_01280 PF00581 Rhodanese-like domain GT360_01285 PF02556 Preprotein translocase subunit SecB GT360_01290 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GT360_01290 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus GT360_01295 PF00132 Bacterial transferase hexapeptide (six repeats) GT360_01295 PF06426 Serine acetyltransferase, N-terminal GT360_01305 PF00311 Phosphoenolpyruvate carboxylase GT360_01310 PF07687 Peptidase dimerisation domain GT360_01310 PF01546 Peptidase family M20/M25/M40 GT360_01315 PF02774 Semialdehyde dehydrogenase, dimerisation domain GT360_01315 PF01118 Semialdehyde dehydrogenase, NAD binding domain GT360_01320 PF00696 Amino acid kinase family GT360_01325 PF00764 Arginosuccinate synthase GT360_01330 PF00206 Lyase GT360_01330 PF14698 Argininosuccinate lyase C-terminal GT360_01330 PF00583 Acetyltransferase (GNAT) family GT360_01340 PF00462 Glutaredoxin GT360_01340 PF08534 Redoxin GT360_01345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_01345 PF03466 LysR substrate binding domain GT360_01350 PF16177 Acetyl-coenzyme A synthetase N-terminus GT360_01350 PF13193 AMP-binding enzyme C-terminal domain GT360_01350 PF00501 AMP-binding enzyme GT360_01365 PF12832 MFS_1 like family GT360_01370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT360_01370 PF00512 His Kinase A (phospho-acceptor) domain GT360_01370 PF00072 Response regulator receiver domain GT360_01370 PF01627 Hpt domain GT360_01370 PF00672 HAMP domain GT360_01380 PF00474 Sodium:solute symporter family GT360_01390 PF02080 TrkA-C domain GT360_01390 PF00999 Sodium/hydrogen exchanger family GT360_01390 PF03471 Transporter associated domain GT360_01395 PF00196 Bacterial regulatory proteins, luxR family GT360_01395 PF00072 Response regulator receiver domain GT360_01400 PF02683 Cytochrome C biogenesis protein transmembrane region GT360_01400 PF11412 Disulphide bond corrector protein DsbC GT360_01405 PF03605 Anaerobic c4-dicarboxylate membrane transporter GT360_01410 PF00206 Lyase GT360_01410 PF10415 Fumarase C C-terminus GT360_01415 PF04186 FxsA cytoplasmic membrane protein GT360_01420 PF00588 SpoU rRNA Methylase family GT360_01425 PF00588 SpoU rRNA Methylase family GT360_01440 PF04851 Type III restriction enzyme, res subunit GT360_01450 PF01381 Helix-turn-helix GT360_01480 PF02899 Phage integrase, N-terminal SAM-like domain GT360_01480 PF00589 Phage integrase family GT360_01485 PF16527 Two-component sensor protein CpxA, periplasmic domain GT360_01485 PF00672 HAMP domain GT360_01485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT360_01485 PF00512 His Kinase A (phospho-acceptor) domain GT360_01490 PF00072 Response regulator receiver domain GT360_01490 PF00486 Transcriptional regulatory protein, C terminal GT360_01500 PF16916 Dimerisation domain of Zinc Transporter GT360_01500 PF01545 Cation efflux family GT360_01505 PF00365 Phosphofructokinase GT360_01515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT360_01515 PF00672 HAMP domain GT360_01520 PF00117 Glutamine amidotransferase class-I GT360_01525 PF00202 Aminotransferase class-III GT360_01530 PF04958 Arginine N-succinyltransferase beta subunit GT360_01545 PF00027 Cyclic nucleotide-binding domain GT360_01545 PF13545 Crp-like helix-turn-helix domain GT360_01550 PF00485 Phosphoribulokinase / Uridine kinase family GT360_01555 PF06794 Uncharacterised protein family (UPF0270) GT360_01560 PF00561 alpha/beta hydrolase fold GT360_01570 PF12848 ABC transporter GT360_01570 PF00005 ABC transporter GT360_01575 PF02525 Flavodoxin-like fold GT360_01580 PF00999 Sodium/hydrogen exchanger family GT360_01580 PF02254 TrkA-N domain GT360_01590 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GT360_01595 PF01112 Asparaginase GT360_01600 PF00709 Adenylosuccinate synthetase GT360_01605 PF08238 Sel1 repeat GT360_01610 PF00175 Oxidoreductase NAD-binding domain GT360_01610 PF00042 Globin GT360_01610 PF00970 Oxidoreductase FAD-binding domain GT360_01615 PF02082 Transcriptional regulator GT360_01620 PF08206 Ribonuclease B OB domain GT360_01620 PF00773 RNB domain GT360_01620 PF00575 S1 RNA binding domain GT360_01620 PF08461 Ribonuclease R winged-helix domain GT360_01620 PF17876 Cold shock domain GT360_01625 PF00588 SpoU rRNA Methylase family GT360_01625 PF08032 RNA 2'-O ribose methyltransferase substrate binding GT360_01630 PF00338 Ribosomal protein S10p/S20e GT360_01640 PF00573 Ribosomal protein L4/L1 family GT360_01645 PF00276 Ribosomal protein L23 GT360_01660 PF00237 Ribosomal protein L22p/L17e GT360_01665 PF00189 Ribosomal protein S3, C-terminal domain GT360_01665 PF07650 KH domain GT360_01670 PF00252 Ribosomal protein L16p/L10e GT360_01675 PF00831 Ribosomal L29 protein GT360_01680 PF00366 Ribosomal protein S17 GT360_01685 PF00238 Ribosomal protein L14p/L23e GT360_01690 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 GT360_01690 PF00467 KOW motif GT360_01695 PF00281 Ribosomal protein L5 GT360_01695 PF00673 ribosomal L5P family C-terminus GT360_01700 PF00253 Ribosomal protein S14p/S29e GT360_01705 PF00410 Ribosomal protein S8 GT360_01710 PF00347 Ribosomal protein L6 GT360_01715 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast GT360_01720 PF03719 Ribosomal protein S5, C-terminal domain GT360_01720 PF00333 Ribosomal protein S5, N-terminal domain GT360_01725 PF00327 Ribosomal protein L30p/L7e GT360_01735 PF00344 SecY translocase GT360_01740 PF00444 Ribosomal protein L36 GT360_01745 PF00416 Ribosomal protein S13/S18 GT360_01750 PF00411 Ribosomal protein S11 GT360_01755 PF01479 S4 domain GT360_01755 PF00163 Ribosomal protein S4/S9 N-terminal domain GT360_01765 PF01196 Ribosomal protein L17 GT360_01775 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GT360_01775 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GT360_01785 PF13673 Acetyltransferase (GNAT) domain GT360_01790 PF02872 5'-nucleotidase, C-terminal domain GT360_01790 PF00149 Calcineurin-like phosphoesterase GT360_01795 PF10414 Sirohaem synthase dimerisation region GT360_01795 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GT360_01795 PF14824 Sirohaem biosynthesis protein central GT360_01800 PF01507 Phosphoadenosine phosphosulfate reductase family GT360_01805 PF00009 Elongation factor Tu GTP binding domain GT360_01810 PF03600 Citrate transporter GT360_01810 PF02080 TrkA-C domain GT360_01835 PF00005 ABC transporter GT360_01850 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) GT360_01855 PF06526 Protein of unknown function (DUF1107) GT360_01860 PF01625 Peptide methionine sulfoxide reductase GT360_01865 PF01103 Surface antigen GT360_01865 PF07244 Surface antigen variable number repeat GT360_01865 PF17243 POTRA domain TamA domain 1 GT360_01870 PF04357 TamB, inner membrane protein subunit of TAM complex GT360_01875 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like GT360_01885 PF00719 Inorganic pyrophosphatase GT360_01890 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain GT360_01895 PF08245 Mur ligase middle domain GT360_01895 PF02875 Mur ligase family, glutamate ligase domain GT360_01895 PF01225 Mur ligase family, catalytic domain GT360_01900 PF02441 Flavoprotein GT360_01905 PF04751 Protein of unknown function (DUF615) GT360_01910 PF01523 Putative modulator of DNA gyrase GT360_01915 PF00571 CBS domain GT360_01915 PF01769 Divalent cation transporter GT360_01915 PF03448 MgtE intracellular N domain GT360_01920 PF00381 PTS HPr component phosphorylation site GT360_01925 PF03668 P-loop ATPase protein family GT360_01930 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GT360_01935 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GT360_01940 PF04552 Sigma-54, DNA binding domain GT360_01940 PF00309 Sigma-54 factor, Activator interacting domain (AID) GT360_01940 PF04963 Sigma-54 factor, core binding domain GT360_01945 PF12399 Branched-chain amino acid ATP-binding cassette transporter GT360_01945 PF00005 ABC transporter GT360_01950 PF03968 OstA-like protein GT360_01965 PF00571 CBS domain GT360_01965 PF01380 SIS domain GT360_01970 PF01699 Sodium/calcium exchanger protein GT360_01975 PF00005 ABC transporter GT360_01980 PF02405 Permease MlaE GT360_01985 PF02470 MlaD protein GT360_01990 PF05494 MlaC protein GT360_01995 PF13466 STAS domain GT360_02000 PF01722 BolA-like protein GT360_02005 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GT360_02010 PF01553 Acyltransferase GT360_02040 PF17200 Single Cache domain 2 GT360_02040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT360_02040 PF00672 HAMP domain GT360_02080 PF01464 Transglycosylase SLT domain GT360_02080 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain GT360_02085 PF04362 Bacterial Fe(2+) trafficking GT360_02090 PF14815 NUDIX domain GT360_02090 PF00730 HhH-GPD superfamily base excision DNA repair protein GT360_02090 PF00633 Helix-hairpin-helix motif GT360_02090 PF10576 Iron-sulfur binding domain of endonuclease III GT360_02095 PF02390 Putative methyltransferase GT360_02105 PF04960 Glutaminase GT360_02110 PF04055 Radical SAM superfamily GT360_02110 PF06969 HemN C-terminal domain GT360_02115 PF01725 Ham1 family GT360_02125 PF02594 Uncharacterised ACR, YggU family COG1872 GT360_02130 PF02325 YGGT family GT360_02135 PF03807 NADP oxidoreductase coenzyme F420-dependent GT360_02135 PF14748 Pyrroline-5-carboxylate reductase dimerisation GT360_02140 PF01168 Alanine racemase, N-terminal domain GT360_02145 PF00437 Type II/IV secretion system protein GT360_02150 PF00437 Type II/IV secretion system protein GT360_02155 PF03652 Holliday junction resolvase GT360_02160 PF02622 Uncharacterized ACR, COG1678 GT360_02165 PF02951 Prokaryotic glutathione synthetase, N-terminal domain GT360_02165 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain GT360_02170 PF04452 RNA methyltransferase GT360_02175 PF17283 SprT-like zinc ribbon domain GT360_02175 PF10263 SprT-like family GT360_02185 PF02772 S-adenosylmethionine synthetase, central domain GT360_02185 PF02773 S-adenosylmethionine synthetase, C-terminal domain GT360_02185 PF00438 S-adenosylmethionine synthetase, N-terminal domain GT360_02190 PF02779 Transketolase, pyrimidine binding domain GT360_02190 PF02780 Transketolase, C-terminal domain GT360_02190 PF00456 Transketolase, thiamine diphosphate binding domain GT360_02205 PF00582 Universal stress protein family GT360_02215 PF16868 NMT1-like family GT360_02225 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain GT360_02225 PF00056 lactate/malate dehydrogenase, NAD binding domain GT360_02235 PF00348 Polyprenyl synthetase GT360_02240 PF00829 Ribosomal prokaryotic L21 protein GT360_02245 PF01016 Ribosomal L27 protein GT360_02250 PF01926 50S ribosome-binding GTPase GT360_02250 PF01018 GTP1/OBG GT360_02255 PF06738 Putative threonine/serine exporter GT360_02260 PF12821 Threonine/Serine exporter, ThrE GT360_02265 PF00186 Dihydrofolate reductase GT360_02275 PF00149 Calcineurin-like phosphoesterase GT360_02285 PF00398 Ribosomal RNA adenine dimethylase GT360_02290 PF04166 Pyridoxal phosphate biosynthetic protein PdxA GT360_02295 PF09312 SurA N-terminal domain GT360_02300 PF03968 OstA-like protein GT360_02300 PF04453 LPS transport system D GT360_02305 PF00226 DnaJ domain GT360_02305 PF05099 Tellurite resistance protein TerB GT360_02310 PF01042 Endoribonuclease L-PSP GT360_02315 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain GT360_02315 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain GT360_02320 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GT360_02320 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GT360_02325 PF03928 Haem-degrading GT360_02335 PF03466 LysR substrate binding domain GT360_02335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_02340 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GT360_02340 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GT360_02345 PF02562 PhoH-like protein GT360_02345 PF13638 PIN domain GT360_02350 PF00271 Helicase conserved C-terminal domain GT360_02350 PF18337 RapA N-terminal Tudor like domain GT360_02350 PF18339 RapA N-terminal Tudor like domain 1 GT360_02350 PF00176 SNF2 family N-terminal domain GT360_02350 PF12137 RNA polymerase recycling family C-terminal GT360_02360 PF00849 RNA pseudouridylate synthase GT360_02365 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GT360_02365 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GT360_02420 PF00694 Aconitase C-terminal domain GT360_02425 PF00330 Aconitase family (aconitate hydratase) GT360_02430 PF00180 Isocitrate/isopropylmalate dehydrogenase GT360_02435 PF08502 LeuA allosteric (dimerisation) domain GT360_02435 PF00682 HMGL-like GT360_02450 PF00873 AcrB/AcrD/AcrF family GT360_02455 PF01569 PAP2 superfamily GT360_02465 PF03466 LysR substrate binding domain GT360_02465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_02470 PF00501 AMP-binding enzyme GT360_02475 PF00205 Thiamine pyrophosphate enzyme, central domain GT360_02475 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GT360_02475 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GT360_02480 PF10369 Small subunit of acetolactate synthase GT360_02485 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GT360_02485 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GT360_02485 PF01842 ACT domain GT360_02490 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) GT360_02495 PF01812 5-formyltetrahydrofolate cyclo-ligase family GT360_02510 PF03695 Uncharacterised protein family (UPF0149) GT360_02515 PF01494 FAD binding domain GT360_02520 PF01494 FAD binding domain GT360_02535 PF01571 Aminomethyltransferase folate-binding domain GT360_02540 PF03937 Flavinator of succinate dehydrogenase GT360_02550 PF00890 FAD binding domain GT360_02550 PF02910 Fumarate reductase flavoprotein C-term GT360_02555 PF04542 Sigma-70 region 2 GT360_02555 PF08281 Sigma-70, region 4 GT360_02560 PF03873 Anti sigma-E protein RseA, C-terminal domain GT360_02560 PF03872 Anti sigma-E protein RseA, N-terminal domain GT360_02565 PF17188 MucB/RseB C-terminal domain GT360_02565 PF03888 MucB/RseB N-terminal domain GT360_02575 PF00679 Elongation factor G C-terminus GT360_02575 PF00009 Elongation factor Tu GTP binding domain GT360_02575 PF03144 Elongation factor Tu domain 2 GT360_02575 PF06421 GTP-binding protein LepA C-terminus GT360_02580 PF10502 Signal peptidase, peptidase S26 GT360_02585 PF00035 Double-stranded RNA binding motif GT360_02585 PF14622 Ribonuclease-III-like GT360_02590 PF07650 KH domain GT360_02590 PF01926 50S ribosome-binding GTPase GT360_02595 PF02565 Recombination protein O C terminal GT360_02595 PF11967 Recombination protein O N terminal GT360_02600 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ GT360_02605 PF01648 4'-phosphopantetheinyl transferase superfamily GT360_02610 PF00512 His Kinase A (phospho-acceptor) domain GT360_02610 PF01627 Hpt domain GT360_02610 PF00072 Response regulator receiver domain GT360_02610 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GT360_02610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT360_02610 PF00672 HAMP domain GT360_02615 PF05958 tRNA (Uracil-5-)-methyltransferase GT360_02615 PF01938 TRAM domain GT360_02620 PF13291 ACT domain GT360_02620 PF04607 Region found in RelA / SpoT proteins GT360_02620 PF02824 TGS domain GT360_02625 PF03819 MazG nucleotide pyrophosphohydrolase domain GT360_02630 PF06418 CTP synthase N-terminus GT360_02630 PF00117 Glutamine amidotransferase class-I GT360_02635 PF03952 Enolase, N-terminal domain GT360_02635 PF00113 Enolase, C-terminal TIM barrel domain GT360_02645 PF12627 Probable RNA and SrmB- binding site of polymerase A GT360_02645 PF01743 Poly A polymerase head domain GT360_02645 PF01966 HD domain GT360_02650 PF01471 Putative peptidoglycan binding domain GT360_02650 PF13401 AAA domain GT360_02660 PF08239 Bacterial SH3 domain GT360_02665 PF01384 Phosphate transporter family GT360_02670 PF01865 Protein of unknown function DUF47 GT360_02675 PF01928 CYTH domain GT360_02680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT360_02680 PF00672 HAMP domain GT360_02685 PF03710 Glutamate-ammonia ligase adenylyltransferase GT360_02685 PF08335 GlnD PII-uridylyltransferase GT360_02690 PF01467 Cytidylyltransferase-like GT360_02690 PF00294 pfkB family carbohydrate kinase GT360_02695 PF02321 Outer membrane efflux protein GT360_02700 PF00293 NUDIX domain GT360_02705 PF06853 Protein of unknown function (DUF1249) GT360_02710 PF00149 Calcineurin-like phosphoesterase GT360_02715 PF05728 Uncharacterised protein family (UPF0227) GT360_02720 PF00204 DNA gyrase B GT360_02720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT360_02720 PF00986 DNA gyrase B subunit, carboxyl terminus GT360_02720 PF01751 Toprim domain GT360_02725 PF00521 DNA gyrase/topoisomerase IV, subunit A GT360_02725 PF03989 DNA gyrase C-terminal domain, beta-propeller GT360_02730 PF13180 PDZ domain GT360_02735 PF00595 PDZ domain GT360_02735 PF13180 PDZ domain GT360_02745 PF03969 AFG1-like ATPase GT360_02750 PF00572 Ribosomal protein L13 GT360_02755 PF00380 Ribosomal protein S9/S16 GT360_02760 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal GT360_02760 PF00355 Rieske [2Fe-2S] domain GT360_02765 PF00032 Cytochrome b(C-terminal)/b6/petD GT360_02765 PF00033 Cytochrome b/b6/petB GT360_02770 PF02167 Cytochrome C1 family GT360_02775 PF00043 Glutathione S-transferase, C-terminal domain GT360_02775 PF02798 Glutathione S-transferase, N-terminal domain GT360_02780 PF04386 Stringent starvation protein B GT360_02785 PF04972 BON domain GT360_02790 PF13580 SIS domain GT360_02795 PF02021 Uncharacterised protein family UPF0102 GT360_02800 PF04348 LppC putative lipoprotein GT360_02805 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GT360_02815 PF01795 MraW methylase family GT360_02820 PF04999 Cell division protein FtsL GT360_02825 PF00905 Penicillin binding protein transpeptidase domain GT360_02825 PF03717 Penicillin-binding Protein dimerisation domain GT360_02830 PF01225 Mur ligase family, catalytic domain GT360_02830 PF08245 Mur ligase middle domain GT360_02830 PF02875 Mur ligase family, glutamate ligase domain GT360_02835 PF01225 Mur ligase family, catalytic domain GT360_02835 PF02875 Mur ligase family, glutamate ligase domain GT360_02835 PF08245 Mur ligase middle domain GT360_02840 PF00953 Glycosyl transferase family 4 GT360_02840 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 GT360_02845 PF08245 Mur ligase middle domain GT360_02845 PF02875 Mur ligase family, glutamate ligase domain GT360_02850 PF01098 Cell cycle protein GT360_02855 PF03033 Glycosyltransferase family 28 N-terminal domain GT360_02855 PF04101 Glycosyltransferase family 28 C-terminal domain GT360_02860 PF01225 Mur ligase family, catalytic domain GT360_02860 PF02875 Mur ligase family, glutamate ligase domain GT360_02860 PF08245 Mur ligase middle domain GT360_02865 PF03799 Cell division protein FtsQ GT360_02865 PF08478 POTRA domain, FtsQ-type GT360_02870 PF02491 SHS2 domain inserted in FTSA GT360_02875 PF00091 Tubulin/FtsZ family, GTPase domain GT360_02875 PF12327 FtsZ family, C-terminal domain GT360_02880 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase GT360_02890 PF01043 SecA preprotein cross-linking domain GT360_02890 PF02810 SEC-C motif GT360_02890 PF07517 SecA DEAD-like domain GT360_02890 PF07516 SecA Wing and Scaffold domain GT360_02895 PF00293 NUDIX domain GT360_02905 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GT360_02905 PF00117 Glutamine amidotransferase class-I GT360_02910 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GT360_02910 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GT360_02910 PF02142 MGS-like domain GT360_02915 PF00107 Zinc-binding dehydrogenase GT360_02915 PF16884 N-terminal domain of oxidoreductase GT360_02925 PF02690 Na+/Pi-cotransporter GT360_02930 PF02690 Na+/Pi-cotransporter GT360_02935 PF03466 LysR substrate binding domain GT360_02935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_02940 PF01022 Bacterial regulatory protein, arsR family GT360_02945 PF01649 Ribosomal protein S20 GT360_02950 PF03023 Lipid II flippase MurJ GT360_02955 PF06574 FAD synthetase GT360_02955 PF01687 Riboflavin kinase GT360_02960 PF06827 Zinc finger found in FPG and IleRS GT360_02960 PF00133 tRNA synthetases class I (I, L, M and V) GT360_02960 PF08264 Anticodon-binding domain of tRNA GT360_02965 PF01252 Signal peptidase (SPase) II GT360_02970 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GT360_02975 PF02401 LytB protein GT360_02985 PF02554 Carbon starvation protein CstA GT360_02995 PF13580 SIS domain GT360_03000 PF03702 Anhydro-N-acetylmuramic acid kinase GT360_03005 PF00933 Glycosyl hydrolase family 3 N terminal domain GT360_03010 PF04397 LytTr DNA-binding domain GT360_03010 PF00072 Response regulator receiver domain GT360_03015 PF06580 Histidine kinase GT360_03015 PF07694 5TMR of 5TMR-LYT GT360_03020 PF00793 DAHP synthetase I family GT360_03025 PF01817 Chorismate mutase type II GT360_03025 PF02153 Prephenate dehydrogenase GT360_03030 PF01551 Peptidase family M23 GT360_03030 PF04225 Opacity-associated protein A LysM-like domain GT360_03035 PF12848 ABC transporter GT360_03035 PF00005 ABC transporter GT360_03040 PF01464 Transglycosylase SLT domain GT360_03040 PF14718 Soluble lytic murein transglycosylase L domain GT360_03045 PF01371 Trp repressor protein GT360_03050 PF01931 Protein of unknown function DUF84 GT360_03055 PF00990 Diguanylate cyclase, GGDEF domain GT360_03055 PF00563 EAL domain GT360_03060 PF13416 Bacterial extracellular solute-binding protein GT360_03065 PF00800 Prephenate dehydratase GT360_03065 PF01817 Chorismate mutase type II GT360_03070 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GT360_03075 PF01464 Transglycosylase SLT domain GT360_03080 PF13525 Outer membrane lipoprotein GT360_03085 PF01479 S4 domain GT360_03085 PF00849 RNA pseudouridylate synthase GT360_03095 PF00004 ATPase family associated with various cellular activities (AAA) GT360_03095 PF02861 Clp amino terminal domain, pathogenicity island component GT360_03095 PF07724 AAA domain (Cdc48 subfamily) GT360_03095 PF10431 C-terminal, D2-small domain, of ClpB protein GT360_03095 PF17871 AAA lid domain GT360_03135 PF00459 Inositol monophosphatase family GT360_03140 PF00588 SpoU rRNA Methylase family GT360_03145 PF02082 Transcriptional regulator GT360_03150 PF00266 Aminotransferase class-V GT360_03155 PF01592 NifU-like N terminal domain GT360_03160 PF01521 Iron-sulphur cluster biosynthesis GT360_03165 PF07743 HSCB C-terminal oligomerisation domain GT360_03165 PF00226 DnaJ domain GT360_03170 PF00012 Hsp70 protein GT360_03175 PF00111 2Fe-2S iron-sulfur cluster binding domain GT360_03180 PF04384 Iron-sulphur cluster assembly GT360_03185 PF12404 Peptidase GT360_03185 PF00883 Cytosol aminopeptidase family, catalytic domain GT360_03190 PF00334 Nucleoside diphosphate kinase GT360_03195 PF04055 Radical SAM superfamily GT360_03200 PF13464 Domain of unknown function (DUF4115) GT360_03205 PF04551 GcpE protein GT360_03210 PF13393 Histidyl-tRNA synthetase GT360_03210 PF03129 Anticodon binding domain GT360_03215 PF09976 Tetratricopeptide repeat-like domain GT360_03220 PF13360 PQQ-like domain GT360_03225 PF01926 50S ribosome-binding GTPase GT360_03225 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal GT360_03240 PF13742 OB-fold nucleic acid binding domain GT360_03240 PF02601 Exonuclease VII, large subunit GT360_03245 PF00571 CBS domain GT360_03245 PF00478 IMP dehydrogenase / GMP reductase domain GT360_03250 PF00958 GMP synthase C terminal domain GT360_03250 PF00117 Glutamine amidotransferase class-I GT360_03250 PF02540 NAD synthase GT360_03255 PF00072 Response regulator receiver domain GT360_03255 PF00196 Bacterial regulatory proteins, luxR family GT360_03260 PF00512 His Kinase A (phospho-acceptor) domain GT360_03260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT360_03265 PF00581 Rhodanese-like domain GT360_03270 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GT360_03270 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region GT360_03270 PF07992 Pyridine nucleotide-disulphide oxidoreductase GT360_03280 PF09335 SNARE associated Golgi protein GT360_03285 PF13416 Bacterial extracellular solute-binding protein GT360_03290 PF00528 Binding-protein-dependent transport system inner membrane component GT360_03295 PF00005 ABC transporter GT360_03300 PF01066 CDP-alcohol phosphatidyltransferase GT360_03305 PF00571 CBS domain GT360_03310 PF02547 Queuosine biosynthesis protein GT360_03315 PF01702 Queuine tRNA-ribosyltransferase GT360_03320 PF02699 Preprotein translocase subunit GT360_03325 PF02355 Protein export membrane protein GT360_03325 PF13721 SecD export protein N-terminal TM region GT360_03325 PF07549 SecD/SecF GG Motif GT360_03330 PF07549 SecD/SecF GG Motif GT360_03330 PF02355 Protein export membrane protein GT360_03350 PF03411 Penicillin-insensitive murein endopeptidase GT360_03360 PF12838 4Fe-4S dicluster domain GT360_03370 PF04381 Putative exonuclease, RdgC GT360_03375 PF00072 Response regulator receiver domain GT360_03375 PF00486 Transcriptional regulatory protein, C terminal GT360_03380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT360_03380 PF11808 Phosphate regulon sensor protein PhoR GT360_03380 PF00512 His Kinase A (phospho-acceptor) domain GT360_03380 PF00989 PAS fold GT360_03385 PF12849 PBP superfamily domain GT360_03390 PF02541 Ppx/GppA phosphatase family GT360_03395 PF17941 Polyphosphate kinase C-terminal domain 1 GT360_03395 PF13090 Polyphosphate kinase C-terminal domain 2 GT360_03395 PF13089 Polyphosphate kinase N-terminal domain GT360_03395 PF02503 Polyphosphate kinase middle domain GT360_03400 PF00528 Binding-protein-dependent transport system inner membrane component GT360_03405 PF00528 Binding-protein-dependent transport system inner membrane component GT360_03410 PF00005 ABC transporter GT360_03415 PF01895 PhoU domain GT360_03420 PF03932 CutC family GT360_03425 PF07130 YebG protein GT360_03430 PF17946 RecC C-terminal domain GT360_03435 PF13361 UvrD-like helicase C-terminal domain GT360_03435 PF00580 UvrD/REP helicase N-terminal domain GT360_03435 PF12705 PD-(D/E)XK nuclease superfamily GT360_03440 PF13538 UvrD-like helicase C-terminal domain GT360_03460 PF06725 3D domain GT360_03460 PF03562 MltA specific insert domain GT360_03465 PF00899 ThiF family GT360_03470 PF02657 Fe-S metabolism associated domain GT360_03475 PF00266 Aminotransferase class-V GT360_03480 PF01965 DJ-1/PfpI family GT360_03485 PF08546 Ketopantoate reductase PanE/ApbA C terminal GT360_03485 PF02558 Ketopantoate reductase PanE/ApbA GT360_03490 PF03502 Nucleoside-specific channel-forming protein, Tsx GT360_03505 PF04542 Sigma-70 region 2 GT360_03505 PF04545 Sigma-70, region 4 GT360_03515 PF07690 Major Facilitator Superfamily GT360_03520 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GT360_03530 PF05175 Methyltransferase small domain GT360_03535 PF01722 BolA-like protein GT360_03540 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) GT360_03540 PF11973 NQRA C-terminal domain GT360_03545 PF03116 NQR2, RnfD, RnfE family GT360_03550 PF04205 FMN-binding domain GT360_03555 PF02508 Rnf-Nqr subunit, membrane protein GT360_03560 PF02508 Rnf-Nqr subunit, membrane protein GT360_03565 PF00111 2Fe-2S iron-sulfur cluster binding domain GT360_03565 PF00970 Oxidoreductase FAD-binding domain GT360_03565 PF00175 Oxidoreductase NAD-binding domain GT360_03570 PF02424 ApbE family GT360_03580 PF00114 Pilin (bacterial filament) GT360_03580 PF07963 Prokaryotic N-terminal methylation motif GT360_03585 PF00114 Pilin (bacterial filament) GT360_03585 PF07963 Prokaryotic N-terminal methylation motif GT360_03605 PF03806 AbgT putative transporter family GT360_03610 PF00756 Putative esterase GT360_03615 PF08240 Alcohol dehydrogenase GroES-like domain GT360_03615 PF00107 Zinc-binding dehydrogenase GT360_03620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_03620 PF03466 LysR substrate binding domain GT360_03625 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GT360_03630 PF00497 Bacterial extracellular solute-binding proteins, family 3 GT360_03630 PF01464 Transglycosylase SLT domain GT360_03635 PF02769 AIR synthase related protein, C-terminal domain GT360_03635 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain GT360_03635 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal GT360_03655 PF06786 Uncharacterised protein family (UPF0253) GT360_03660 PF03129 Anticodon binding domain GT360_03660 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GT360_03660 PF04073 Aminoacyl-tRNA editing domain GT360_03665 PF01980 tRNA-methyltransferase O GT360_03665 PF18389 TrmO C-terminal domain GT360_03670 PF03806 AbgT putative transporter family GT360_03675 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 GT360_03700 PF04287 tRNA pseudouridine synthase C GT360_03705 PF00849 RNA pseudouridylate synthase GT360_03710 PF13292 1-deoxy-D-xylulose-5-phosphate synthase GT360_03710 PF02779 Transketolase, pyrimidine binding domain GT360_03710 PF02780 Transketolase, C-terminal domain GT360_03715 PF00348 Polyprenyl synthetase GT360_03725 PF01618 MotA/TolQ/ExbB proton channel family GT360_03730 PF13677 Membrane MotB of proton-channel complex MotA/MotB GT360_03730 PF00691 OmpA family GT360_03735 PF02926 THUMP domain GT360_03735 PF02568 Thiamine biosynthesis protein (ThiI) GT360_03740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_03740 PF03466 LysR substrate binding domain GT360_03750 PF04241 Protein of unknown function (DUF423) GT360_03765 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GT360_03765 PF01367 5'-3' exonuclease, C-terminal SAM fold GT360_03770 PF11892 Domain of unknown function (DUF3412) GT360_03770 PF03641 Possible lysine decarboxylase GT360_03770 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases GT360_03775 PF00990 Diguanylate cyclase, GGDEF domain GT360_03775 PF05230 MASE2 domain GT360_03785 PF14489 QueF-like protein GT360_03785 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term GT360_03790 PF07348 Syd protein (SUKH-2) GT360_03795 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) GT360_03800 PF03180 NLPA lipoprotein GT360_03805 PF00528 Binding-protein-dependent transport system inner membrane component GT360_03810 PF00005 ABC transporter GT360_03810 PF09383 NIL domain GT360_03820 PF00356 Bacterial regulatory proteins, lacI family GT360_03825 PF02378 Phosphotransferase system, EIIC GT360_03825 PF00367 phosphotransferase system, EIIB GT360_03830 PF00128 Alpha amylase, catalytic domain GT360_03830 PF16657 Maltogenic Amylase, C-terminal domain GT360_03865 PF00873 AcrB/AcrD/AcrF family GT360_03870 PF13426 PAS domain GT360_03870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT360_03870 PF00672 HAMP domain GT360_03895 PF00149 Calcineurin-like phosphoesterase GT360_03895 PF02872 5'-nucleotidase, C-terminal domain GT360_03900 PF00464 Serine hydroxymethyltransferase GT360_03905 PF03466 LysR substrate binding domain GT360_03905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_03915 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family GT360_03915 PF04055 Radical SAM superfamily GT360_03920 PF03099 Biotin/lipoate A/B protein ligase family GT360_03925 PF04359 Protein of unknown function (DUF493) GT360_03930 PF00768 D-alanyl-D-alanine carboxypeptidase GT360_03930 PF07943 Penicillin-binding protein 5, C-terminal domain GT360_03935 PF05036 Sporulation related domain GT360_03935 PF03330 Lytic transglycolase GT360_03940 PF01098 Cell cycle protein GT360_03945 PF03717 Penicillin-binding Protein dimerisation domain GT360_03945 PF00905 Penicillin binding protein transpeptidase domain GT360_03950 PF02590 Predicted SPOUT methyltransferase GT360_03960 PF06144 DNA polymerase III, delta subunit GT360_03960 PF14840 Processivity clamp loader gamma complex DNA pol III C-term GT360_03965 PF04390 Lipopolysaccharide-assembly GT360_03970 PF08264 Anticodon-binding domain of tRNA GT360_03970 PF00133 tRNA synthetases class I (I, L, M and V) GT360_03970 PF13603 Leucyl-tRNA synthetase, Domain 2 GT360_03975 PF07295 Zinc-ribbon containing domain GT360_03980 PF00795 Carbon-nitrogen hydrolase GT360_03985 PF03471 Transporter associated domain GT360_03985 PF00571 CBS domain GT360_03990 PF02130 Uncharacterized protein family UPF0054 GT360_03995 PF02562 PhoH-like protein GT360_04000 PF00919 Uncharacterized protein family UPF0004 GT360_04000 PF04055 Radical SAM superfamily GT360_04000 PF01938 TRAM domain GT360_04005 PF01494 FAD binding domain GT360_04010 PF00873 AcrB/AcrD/AcrF family GT360_04025 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GT360_04030 PF05524 PEP-utilising enzyme, N-terminal GT360_04030 PF00391 PEP-utilising enzyme, mobile domain GT360_04030 PF02896 PEP-utilising enzyme, TIM barrel domain GT360_04035 PF00381 PTS HPr component phosphorylation site GT360_04040 PF00291 Pyridoxal-phosphate dependent enzyme GT360_04050 PF04354 ZipA, C-terminal FtsZ-binding domain GT360_04055 PF00533 BRCA1 C Terminus (BRCT) domain GT360_04055 PF12826 Helix-hairpin-helix motif GT360_04055 PF03119 NAD-dependent DNA ligase C4 zinc finger domain GT360_04055 PF03120 NAD-dependent DNA ligase OB-fold domain GT360_04055 PF01653 NAD-dependent DNA ligase adenylation domain GT360_04080 PF16200 C-terminal region of band_7 GT360_04080 PF01145 SPFH domain / Band 7 family GT360_04085 PF00085 Thioredoxin GT360_04090 PF00106 short chain dehydrogenase GT360_04095 PF01370 NAD dependent epimerase/dehydratase family GT360_04095 PF08338 Domain of unknown function (DUF1731) GT360_04100 PF07556 Protein of unknown function (DUF1538) GT360_04105 PF07556 Protein of unknown function (DUF1538) GT360_04115 PF00571 CBS domain GT360_04120 PF12850 Calcineurin-like phosphoesterase superfamily domain GT360_04125 PF17323 Trans-membrane regulatory protein ToxS GT360_04130 PF00486 Transcriptional regulatory protein, C terminal GT360_04135 PF00183 Hsp90 protein GT360_04135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT360_04140 PF05191 Adenylate kinase, active site lid GT360_04145 PF00762 Ferrochelatase GT360_04150 PF02357 Transcription termination factor nusG GT360_04155 PF13537 Glutamine amidotransferase domain GT360_04155 PF00733 Asparagine synthase GT360_04160 PF02254 TrkA-N domain GT360_04160 PF00999 Sodium/hydrogen exchanger family GT360_04165 PF00480 ROK family GT360_04165 PF01047 MarR family GT360_04170 PF01979 Amidohydrolase family GT360_04175 PF00367 phosphotransferase system, EIIB GT360_04175 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GT360_04175 PF02378 Phosphotransferase system, EIIC GT360_04185 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase GT360_04185 PF14572 Phosphoribosyl synthetase-associated domain GT360_04190 PF00288 GHMP kinases N terminal domain GT360_04190 PF08544 GHMP kinases C terminal GT360_04195 PF03550 Outer membrane lipoprotein LolB GT360_04200 PF01488 Shikimate / quinate 5-dehydrogenase GT360_04200 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain GT360_04200 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain GT360_04205 PF03462 PCRF domain GT360_04205 PF00472 RF-1 domain GT360_04210 PF13847 Methyltransferase domain GT360_04210 PF17827 PrmC N-terminal domain GT360_04215 PF04247 Invasion gene expression up-regulator, SirB GT360_04220 PF13369 Transglutaminase-like superfamily GT360_04225 PF00793 DAHP synthetase I family GT360_04230 PF00149 Calcineurin-like phosphoesterase GT360_04230 PF02872 5'-nucleotidase, C-terminal domain GT360_04235 PF04073 Aminoacyl-tRNA editing domain GT360_04250 PF03358 NADPH-dependent FMN reductase GT360_04255 PF03960 ArsC family GT360_04260 PF13181 Tetratricopeptide repeat GT360_04260 PF01435 Peptidase family M48 GT360_04270 PF01594 AI-2E family transporter GT360_04275 PF02743 Cache domain GT360_04275 PF00672 HAMP domain GT360_04275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT360_04280 PF00578 AhpC/TSA family GT360_04285 PF01842 ACT domain GT360_04290 PF00701 Dihydrodipicolinate synthetase family GT360_04310 PF01546 Peptidase family M20/M25/M40 GT360_04310 PF07687 Peptidase dimerisation domain GT360_04315 PF03960 ArsC family GT360_04320 PF07885 Ion channel GT360_04330 PF13698 Domain of unknown function (DUF4156) GT360_04340 PF11143 Protein of unknown function (DUF2919) GT360_04345 PF04261 Dyp-type peroxidase family GT360_04350 PF00669 Bacterial flagellin N-terminal helical region GT360_04350 PF07196 Flagellin hook IN motif GT360_04350 PF00700 Bacterial flagellin C-terminal helical region GT360_04355 PF00669 Bacterial flagellin N-terminal helical region GT360_04355 PF07196 Flagellin hook IN motif GT360_04355 PF00700 Bacterial flagellin C-terminal helical region GT360_04360 PF07196 Flagellin hook IN motif GT360_04360 PF00669 Bacterial flagellin N-terminal helical region GT360_04360 PF00700 Bacterial flagellin C-terminal helical region GT360_04365 PF03646 FlaG protein GT360_04370 PF07196 Flagellin hook IN motif GT360_04370 PF02465 Flagellar hook-associated protein 2 N-terminus GT360_04370 PF07195 Flagellar hook-associated protein 2 C-terminus GT360_04380 PF02561 Flagellar protein FliS GT360_04385 PF00158 Sigma-54 interaction domain GT360_04385 PF02954 Bacterial regulatory protein, Fis family GT360_04385 PF06490 Flagellar regulatory protein FleQ GT360_04390 PF00512 His Kinase A (phospho-acceptor) domain GT360_04390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT360_04395 PF02954 Bacterial regulatory protein, Fis family GT360_04395 PF00158 Sigma-54 interaction domain GT360_04395 PF00072 Response regulator receiver domain GT360_04400 PF02049 Flagellar hook-basal body complex protein FliE GT360_04405 PF01514 Secretory protein of YscJ/FliF family GT360_04405 PF08345 Flagellar M-ring protein C-terminal GT360_04410 PF14841 FliG middle domain GT360_04410 PF01706 FliG C-terminal domain GT360_04410 PF14842 FliG N-terminal domain GT360_04420 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GT360_04420 PF18269 T3SS EscN ATPase C-terminal domain GT360_04435 PF03748 Flagellar basal body-associated protein FliL GT360_04440 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GT360_04440 PF02154 Flagellar motor switch protein FliM GT360_04445 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GT360_04455 PF00813 FliP family GT360_04460 PF01313 Bacterial export proteins, family 3 GT360_04465 PF01311 Bacterial export proteins, family 1 GT360_04470 PF01312 FlhB HrpN YscU SpaS Family GT360_04475 PF01713 Smr domain GT360_04480 PF05175 Methyltransferase small domain GT360_04485 PF01264 Chorismate synthase GT360_04490 PF03458 UPF0126 domain GT360_04495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT360_04495 PF00512 His Kinase A (phospho-acceptor) domain GT360_04495 PF00672 HAMP domain GT360_04500 PF00072 Response regulator receiver domain GT360_04500 PF00486 Transcriptional regulatory protein, C terminal GT360_04510 PF04315 Elongation factor P hydroxylase GT360_04515 PF08891 YfcL protein GT360_04525 PF01266 FAD dependent oxidoreductase GT360_04525 PF05430 S-adenosyl-L-methionine-dependent methyltransferase GT360_04530 PF02801 Beta-ketoacyl synthase, C-terminal domain GT360_04530 PF00109 Beta-ketoacyl synthase, N-terminal domain GT360_04535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GT360_04535 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GT360_04535 PF11890 Domain of unknown function (DUF3410) GT360_04540 PF02774 Semialdehyde dehydrogenase, dimerisation domain GT360_04540 PF01118 Semialdehyde dehydrogenase, NAD binding domain GT360_04550 PF01416 tRNA pseudouridine synthase GT360_04555 PF17848 Acetyl-coA carboxylase zinc finger domain GT360_04555 PF01039 Carboxyl transferase domain GT360_04560 PF02875 Mur ligase family, glutamate ligase domain GT360_04560 PF08245 Mur ligase middle domain GT360_04565 PF05036 Sporulation related domain GT360_04570 PF02674 Colicin V production protein GT360_04575 PF00156 Phosphoribosyl transferase domain GT360_04580 PF00950 ABC 3 transport family GT360_04585 PF00005 ABC transporter GT360_04590 PF01297 Zinc-uptake complex component A periplasmic GT360_04595 PF12833 Helix-turn-helix domain GT360_04600 PF04023 FeoA domain GT360_04605 PF07664 Ferrous iron transport protein B C terminus GT360_04605 PF17910 FeoB cytosolic helical domain GT360_04605 PF02421 Ferrous iron transport protein B GT360_04605 PF07670 Nucleoside recognition GT360_04625 PF00750 tRNA synthetases class I (R) GT360_04625 PF05746 DALR anticodon binding domain GT360_04625 PF03485 Arginyl tRNA synthetase N terminal domain GT360_04630 PF06185 YecM protein GT360_04635 PF05193 Peptidase M16 inactive domain GT360_04635 PF00675 Insulinase (Peptidase family M16) GT360_04640 PF00300 Histidine phosphatase superfamily (branch 1) GT360_04645 PF00771 FHIPEP family GT360_04650 PF00448 SRP54-type protein, GTPase domain GT360_04655 PF10609 NUBPL iron-transfer P-loop NTPase GT360_04660 PF04542 Sigma-70 region 2 GT360_04660 PF04545 Sigma-70, region 4 GT360_04660 PF04539 Sigma-70 region 3 GT360_04665 PF00072 Response regulator receiver domain GT360_04670 PF04344 Chemotaxis phosphatase, CheZ GT360_04675 PF00072 Response regulator receiver domain GT360_04675 PF01584 CheW-like domain GT360_04675 PF01627 Hpt domain GT360_04675 PF02895 Signal transducing histidine kinase, homodimeric domain GT360_04675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT360_04680 PF00072 Response regulator receiver domain GT360_04680 PF01339 CheB methylesterase GT360_04685 PF13614 AAA domain GT360_04695 PF01584 CheW-like domain GT360_04705 PF00005 ABC transporter GT360_04710 PF03379 CcmB protein GT360_04715 PF01578 Cytochrome C assembly protein GT360_04725 PF03100 CcmE GT360_04730 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal GT360_04730 PF01578 Cytochrome C assembly protein GT360_04735 PF08534 Redoxin GT360_04740 PF03918 Cytochrome C biogenesis protein GT360_04745 PF03918 Cytochrome C biogenesis protein GT360_04750 PF04333 MlaA lipoprotein GT360_04755 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) GT360_04760 PF01740 STAS domain GT360_04760 PF00916 Sulfate permease family GT360_04765 PF12111 Polyribonucleotide phosphorylase C terminal GT360_04765 PF10150 Ribonuclease E/G family GT360_04765 PF00575 S1 RNA binding domain GT360_04770 PF01479 S4 domain GT360_04770 PF00849 RNA pseudouridylate synthase GT360_04775 PF02545 Maf-like protein GT360_04780 PF02620 Large ribosomal RNA subunit accumulation protein YceD GT360_04790 PF02504 Fatty acid synthesis protein GT360_04795 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GT360_04795 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GT360_04800 PF00698 Acyl transferase domain GT360_04810 PF00550 Phosphopantetheine attachment site GT360_04815 PF02801 Beta-ketoacyl synthase, C-terminal domain GT360_04815 PF00109 Beta-ketoacyl synthase, N-terminal domain GT360_04820 PF01063 Amino-transferase class IV GT360_04825 PF02618 YceG-like family GT360_04830 PF02223 Thymidylate kinase GT360_04835 PF09115 DNA polymerase III, delta subunit, C terminal GT360_04840 PF01026 TatD related DNase GT360_04845 PF02378 Phosphotransferase system, EIIC GT360_04845 PF00367 phosphotransferase system, EIIB GT360_04860 PF13286 Phosphohydrolase-associated domain GT360_04860 PF01966 HD domain GT360_04870 PF00155 Aminotransferase class I and II GT360_04875 PF00425 chorismate binding enzyme GT360_04885 PF12697 Alpha/beta hydrolase family GT360_04890 PF00378 Enoyl-CoA hydratase/isomerase GT360_04895 PF13378 Enolase C-terminal domain-like GT360_04900 PF00501 AMP-binding enzyme GT360_04900 PF13193 AMP-binding enzyme C-terminal domain GT360_04910 PF07690 Major Facilitator Superfamily GT360_04930 PF00106 short chain dehydrogenase GT360_04935 PF01343 Peptidase family S49 GT360_04935 PF08496 Peptidase family S49 N-terminal GT360_04940 PF00816 H-NS histone family GT360_04945 PF03553 Na+/H+ antiporter family GT360_04950 PF03466 LysR substrate binding domain GT360_04950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_04955 PF07690 Major Facilitator Superfamily GT360_04970 PF10689 Protein of unknown function (DUF2496) GT360_04975 PF07445 Primosomal replication protein priC GT360_04980 PF01925 Sulfite exporter TauE/SafE GT360_04985 PF06733 DEAD_2 GT360_04985 PF13307 Helicase C-terminal domain GT360_04990 PF13609 Gram-negative porin GT360_05000 PF00202 Aminotransferase class-III GT360_05005 PF04055 Radical SAM superfamily GT360_05005 PF06968 Biotin and Thiamin Synthesis associated domain GT360_05010 PF00155 Aminotransferase class I and II GT360_05015 PF08241 Methyltransferase domain GT360_05025 PF01435 Peptidase family M48 GT360_05035 PF18494 Pullulanase Ins domain GT360_05035 PF17967 Pullulanase N2 domain GT360_05035 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GT360_05035 PF11852 Domain of unknown function (DUF3372) GT360_05035 PF03714 Bacterial pullanase-associated domain GT360_05045 PF00106 short chain dehydrogenase GT360_05080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GT360_05085 PF00528 Binding-protein-dependent transport system inner membrane component GT360_05090 PF12911 N-terminal TM domain of oligopeptide transport permease C GT360_05090 PF00528 Binding-protein-dependent transport system inner membrane component GT360_05095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GT360_05095 PF00005 ABC transporter GT360_05100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GT360_05100 PF00005 ABC transporter GT360_05105 PF13409 Glutathione S-transferase, N-terminal domain GT360_05130 PF01734 Patatin-like phospholipase GT360_05135 PF00480 ROK family GT360_05140 PF01584 CheW-like domain GT360_05140 PF00072 Response regulator receiver domain GT360_05145 PF00206 Lyase GT360_05145 PF08328 Adenylosuccinate lyase C-terminal GT360_05150 PF04356 Protein of unknown function (DUF489) GT360_05160 PF00294 pfkB family carbohydrate kinase GT360_05165 PF00230 Major intrinsic protein GT360_05170 PF03692 Putative zinc- or iron-chelating domain GT360_05180 PF07992 Pyridine nucleotide-disulphide oxidoreductase GT360_05190 PF02683 Cytochrome C biogenesis protein transmembrane region GT360_05190 PF11412 Disulphide bond corrector protein DsbC GT360_05195 PF00085 Thioredoxin GT360_05195 PF07992 Pyridine nucleotide-disulphide oxidoreductase GT360_05215 PF13847 Methyltransferase domain GT360_05220 PF01263 Aldose 1-epimerase GT360_05225 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GT360_05225 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GT360_05230 PF01641 SelR domain GT360_05240 PF07023 Protein of unknown function (DUF1315) GT360_05245 PF00710 Asparaginase, N-terminal GT360_05245 PF17763 Glutaminase/Asparaginase C-terminal domain GT360_05250 PF01343 Peptidase family S49 GT360_05255 PF07992 Pyridine nucleotide-disulphide oxidoreductase GT360_05255 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GT360_05260 PF01557 Fumarylacetoacetate (FAA) hydrolase family GT360_05265 PF00551 Formyl transferase GT360_05265 PF01842 ACT domain GT360_05270 PF13307 Helicase C-terminal domain GT360_05270 PF04851 Type III restriction enzyme, res subunit GT360_05275 PF00814 Glycoprotease family GT360_05285 PF00561 alpha/beta hydrolase fold GT360_05290 PF13193 AMP-binding enzyme C-terminal domain GT360_05290 PF00501 AMP-binding enzyme GT360_05295 PF00570 HRDC domain GT360_05295 PF01612 3'-5' exonuclease GT360_05310 PF03313 Serine dehydratase alpha chain GT360_05310 PF03315 Serine dehydratase beta chain GT360_05315 PF03222 Tryptophan/tyrosine permease family GT360_05320 PF00293 NUDIX domain GT360_05325 PF04715 Anthranilate synthase component I, N terminal region GT360_05325 PF00425 chorismate binding enzyme GT360_05340 PF04317 YcjX-like family, DUF463 GT360_05345 PF05128 Domain of unknown function (DUF697) GT360_05350 PF18024 Helix-turn-helix domain GT360_05350 PF00158 Sigma-54 interaction domain GT360_05355 PF13302 Acetyltransferase (GNAT) domain GT360_05375 PF00925 GTP cyclohydrolase II GT360_05380 PF01471 Putative peptidoglycan binding domain GT360_05380 PF03734 L,D-transpeptidase catalytic domain GT360_05385 PF00753 Metallo-beta-lactamase superfamily GT360_05400 PF01966 HD domain GT360_05400 PF11871 Domain of unknown function (DUF3391) GT360_05425 PF00012 Hsp70 protein GT360_05430 PF00012 Hsp70 protein GT360_05445 PF01053 Cys/Met metabolism PLP-dependent enzyme GT360_05460 PF08443 RimK-like ATP-grasp domain GT360_05460 PF18030 RimK PreATP-grasp domain GT360_05465 PF00005 ABC transporter GT360_05465 PF00664 ABC transporter transmembrane region GT360_05470 PF00005 ABC transporter GT360_05470 PF00664 ABC transporter transmembrane region GT360_05475 PF07992 Pyridine nucleotide-disulphide oxidoreductase GT360_05485 PF00266 Aminotransferase class-V GT360_05495 PF13302 Acetyltransferase (GNAT) domain GT360_05505 PF00128 Alpha amylase, catalytic domain GT360_05510 PF00873 AcrB/AcrD/AcrF family GT360_05515 PF13533 Biotin-lipoyl like GT360_05520 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GT360_05560 PF07683 Cobalamin synthesis protein cobW C-terminal domain GT360_05560 PF02492 CobW/HypB/UreG, nucleotide-binding domain GT360_05565 PF01926 50S ribosome-binding GTPase GT360_05570 PF02653 Branched-chain amino acid transport system / permease component GT360_05575 PF00005 ABC transporter GT360_05580 PF13407 Periplasmic binding protein domain GT360_05585 PF14480 DNA polymerase III polC-type N-terminus I GT360_05585 PF11490 DNA polymerase III polC-type N-terminus II GT360_05585 PF07733 Bacterial DNA polymerase III alpha NTPase domain GT360_05585 PF00929 Exonuclease GT360_05585 PF14579 Helix-hairpin-helix motif GT360_05585 PF02811 PHP domain GT360_05585 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GT360_05595 PF00290 Tryptophan synthase alpha chain GT360_05600 PF00291 Pyridoxal-phosphate dependent enzyme GT360_05605 PF00218 Indole-3-glycerol phosphate synthase GT360_05605 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase GT360_05610 PF02885 Glycosyl transferase family, helical bundle domain GT360_05610 PF00591 Glycosyl transferase family, a/b domain GT360_05615 PF00117 Glutamine amidotransferase class-I GT360_05620 PF00425 chorismate binding enzyme GT360_05620 PF04715 Anthranilate synthase component I, N terminal region GT360_05630 PF02811 PHP domain GT360_05635 PF01300 Telomere recombination GT360_05640 PF01479 S4 domain GT360_05640 PF00849 RNA pseudouridylate synthase GT360_05655 PF01556 DnaJ C terminal domain GT360_05655 PF00684 DnaJ central domain GT360_05655 PF00226 DnaJ domain GT360_05670 PF13183 4Fe-4S dicluster domain GT360_05670 PF01565 FAD binding domain GT360_05670 PF02913 FAD linked oxidases, C-terminal domain GT360_05685 PF04269 Protein of unknown function, DUF440 GT360_05690 PF09285 Elongation factor P, C-terminal GT360_05690 PF08207 Elongation factor P (EF-P) KOW-like domain GT360_05690 PF01132 Elongation factor P (EF-P) OB domain GT360_05700 PF00136 DNA polymerase family B GT360_05700 PF03104 DNA polymerase family B, exonuclease domain GT360_05705 PF00196 Bacterial regulatory proteins, luxR family GT360_05705 PF00072 Response regulator receiver domain GT360_05710 PF08459 UvrC Helix-hairpin-helix N-terminal GT360_05710 PF02151 UvrB/uvrC motif GT360_05710 PF01541 GIY-YIG catalytic domain GT360_05715 PF01066 CDP-alcohol phosphatidyltransferase GT360_05745 PF01409 tRNA synthetases class II core domain (F) GT360_05745 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain GT360_05750 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain GT360_05750 PF03484 tRNA synthetase B5 domain GT360_05750 PF01588 Putative tRNA binding domain GT360_05750 PF03483 B3/4 domain GT360_05750 PF03147 Ferredoxin-fold anticodon binding domain GT360_05775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT360_05775 PF00072 Response regulator receiver domain GT360_05785 PF01863 Protein of unknown function DUF45 GT360_05790 PF05971 RNA methyltransferase GT360_05795 PF00909 Ammonium Transporter Family GT360_05800 PF00149 Calcineurin-like phosphoesterase GT360_05800 PF02872 5'-nucleotidase, C-terminal domain GT360_05810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT360_05810 PF17200 Single Cache domain 2 GT360_05810 PF00672 HAMP domain GT360_05820 PF02028 BCCT, betaine/carnitine/choline family transporter GT360_05825 PF00440 Bacterial regulatory proteins, tetR family GT360_05840 PF00232 Glycosyl hydrolase family 1 GT360_05845 PF02378 Phosphotransferase system, EIIC GT360_05845 PF00367 phosphotransferase system, EIIB GT360_05870 PF12833 Helix-turn-helix domain GT360_05900 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term GT360_05900 PF12833 Helix-turn-helix domain GT360_05915 PF05661 Protein of unknown function (DUF808) GT360_05930 PF08240 Alcohol dehydrogenase GroES-like domain GT360_05930 PF00107 Zinc-binding dehydrogenase GT360_05935 PF00132 Bacterial transferase hexapeptide (six repeats) GT360_05940 PF01327 Polypeptide deformylase GT360_05945 PF00512 His Kinase A (phospho-acceptor) domain GT360_05945 PF09308 LuxQ, periplasmic GT360_05945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT360_05945 PF00072 Response regulator receiver domain GT360_05975 PF03466 LysR substrate binding domain GT360_05975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_06010 PF00106 short chain dehydrogenase GT360_06015 PF12833 Helix-turn-helix domain GT360_06030 PF13419 Haloacid dehalogenase-like hydrolase GT360_06040 PF00842 Alanine racemase, C-terminal domain GT360_06040 PF01168 Alanine racemase, N-terminal domain GT360_06050 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GT360_06050 PF13378 Enolase C-terminal domain-like GT360_06055 PF01063 Amino-transferase class IV GT360_06070 PF12729 Four helix bundle sensory module for signal transduction GT360_06070 PF00672 HAMP domain GT360_06070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT360_06080 PF13520 Amino acid permease GT360_06095 PF01266 FAD dependent oxidoreductase GT360_06100 PF03466 LysR substrate binding domain GT360_06100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_06130 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GT360_06130 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GT360_06135 PF03466 LysR substrate binding domain GT360_06135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_06145 PF00487 Fatty acid desaturase GT360_06150 PF01810 LysE type translocator GT360_06165 PF01544 CorA-like Mg2+ transporter protein GT360_06170 PF03458 UPF0126 domain GT360_06180 PF00144 Beta-lactamase GT360_06190 PF00144 Beta-lactamase GT360_06200 PF12833 Helix-turn-helix domain GT360_06210 PF13382 Adenine deaminase C-terminal domain GT360_06210 PF01979 Amidohydrolase family GT360_06240 PF00005 ABC transporter GT360_06245 PF00528 Binding-protein-dependent transport system inner membrane component GT360_06250 PF00005 ABC transporter GT360_06255 PF03616 Sodium/glutamate symporter GT360_06260 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GT360_06285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_06285 PF03466 LysR substrate binding domain GT360_06305 PF04231 Endonuclease I GT360_06310 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family GT360_06315 PF00148 Nitrogenase component 1 type Oxidoreductase GT360_06320 PF11844 Domain of unknown function (DUF3364) GT360_06320 PF00148 Nitrogenase component 1 type Oxidoreductase GT360_06330 PF16844 Dinitrogenase iron-molybdenum cofactor, N-terminal GT360_06330 PF02579 Dinitrogenase iron-molybdenum cofactor GT360_06340 PF00148 Nitrogenase component 1 type Oxidoreductase GT360_06345 PF00148 Nitrogenase component 1 type Oxidoreductase GT360_06350 PF02579 Dinitrogenase iron-molybdenum cofactor GT360_06355 PF12838 4Fe-4S dicluster domain GT360_06360 PF01592 NifU-like N terminal domain GT360_06360 PF01106 NifU-like domain GT360_06360 PF04324 BFD-like [2Fe-2S] binding domain GT360_06365 PF00266 Aminotransferase class-V GT360_06370 PF00682 HMGL-like GT360_06380 PF04319 NifZ domain GT360_06385 PF00639 PPIC-type PPIASE domain GT360_06395 PF00528 Binding-protein-dependent transport system inner membrane component GT360_06400 PF03459 TOBE domain GT360_06400 PF00005 ABC transporter GT360_06405 PF04891 NifQ GT360_06415 PF04055 Radical SAM superfamily GT360_06415 PF02579 Dinitrogenase iron-molybdenum cofactor GT360_06420 PF00158 Sigma-54 interaction domain GT360_06420 PF02954 Bacterial regulatory protein, Fis family GT360_06420 PF13185 GAF domain GT360_06425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT360_06425 PF00512 His Kinase A (phospho-acceptor) domain GT360_06430 PF02508 Rnf-Nqr subunit, membrane protein GT360_06435 PF04060 Putative Fe-S cluster GT360_06440 PF13375 RnfC Barrel sandwich hybrid domain GT360_06440 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit GT360_06440 PF12838 4Fe-4S dicluster domain GT360_06445 PF03116 NQR2, RnfD, RnfE family GT360_06450 PF04205 FMN-binding domain GT360_06455 PF02508 Rnf-Nqr subunit, membrane protein GT360_06460 PF03658 RnfH family Ubiquitin GT360_06465 PF00258 Flavodoxin GT360_06470 PF00367 phosphotransferase system, EIIB GT360_06470 PF02378 Phosphotransferase system, EIIC GT360_06480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT360_06480 PF00672 HAMP domain GT360_06480 PF02743 Cache domain GT360_06510 PF00583 Acetyltransferase (GNAT) family GT360_06510 PF00795 Carbon-nitrogen hydrolase GT360_06525 PF00583 Acetyltransferase (GNAT) family GT360_06525 PF13508 Acetyltransferase (GNAT) domain GT360_06545 PF01177 Asp/Glu/Hydantoin racemase GT360_06575 PF00245 Alkaline phosphatase GT360_06595 PF02696 Uncharacterized ACR, YdiU/UPF0061 family GT360_06600 PF00356 Bacterial regulatory proteins, lacI family GT360_06605 PF01915 Glycosyl hydrolase family 3 C-terminal domain GT360_06605 PF00933 Glycosyl hydrolase family 3 N terminal domain GT360_06605 PF14310 Fibronectin type III-like domain GT360_06615 PF00171 Aldehyde dehydrogenase family GT360_06620 PF00877 NlpC/P60 family GT360_06620 PF01476 LysM domain GT360_06630 PF12802 MarR family GT360_06635 PF03466 LysR substrate binding domain GT360_06635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_06640 PF02525 Flavodoxin-like fold GT360_06655 PF03466 LysR substrate binding domain GT360_06655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_06675 PF13593 SBF-like CPA transporter family (DUF4137) GT360_06690 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GT360_06695 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component GT360_06700 PF03480 Bacterial extracellular solute-binding protein, family 7 GT360_06705 PF00698 Acyl transferase domain GT360_06705 PF16197 Ketoacyl-synthetase C-terminal extension GT360_06705 PF02801 Beta-ketoacyl synthase, C-terminal domain GT360_06705 PF08659 KR domain GT360_06705 PF00550 Phosphopantetheine attachment site GT360_06705 PF14765 Polyketide synthase dehydratase GT360_06705 PF00109 Beta-ketoacyl synthase, N-terminal domain GT360_06705 PF08240 Alcohol dehydrogenase GroES-like domain GT360_06705 PF00107 Zinc-binding dehydrogenase GT360_06710 PF01475 Ferric uptake regulator family GT360_06715 PF02492 CobW/HypB/UreG, nucleotide-binding domain GT360_06715 PF07683 Cobalamin synthesis protein cobW C-terminal domain GT360_06725 PF00528 Binding-protein-dependent transport system inner membrane component GT360_06730 PF00528 Binding-protein-dependent transport system inner membrane component GT360_06740 PF17912 MalK OB fold domain GT360_06740 PF00005 ABC transporter GT360_06745 PF07729 FCD domain GT360_06745 PF00392 Bacterial regulatory proteins, gntR family GT360_06750 PF00171 Aldehyde dehydrogenase family GT360_06755 PF13287 Fn3 associated GT360_06755 PF16355 Domain of unknown function (DUF4982) GT360_06755 PF02836 Glycosyl hydrolases family 2, TIM barrel domain GT360_06755 PF02837 Glycosyl hydrolases family 2, sugar binding domain GT360_06755 PF00703 Glycosyl hydrolases family 2 GT360_06765 PF02264 LamB porin GT360_06770 PF02449 Beta-galactosidase GT360_06770 PF17992 Agarase CBM like domain GT360_06775 PF17992 Agarase CBM like domain GT360_06780 PF02449 Beta-galactosidase GT360_06780 PF17992 Agarase CBM like domain GT360_06790 PF01548 Transposase GT360_06790 PF02371 Transposase IS116/IS110/IS902 family GT360_06795 PF02449 Beta-galactosidase GT360_06795 PF17992 Agarase CBM like domain GT360_06800 PF07729 FCD domain GT360_06800 PF00392 Bacterial regulatory proteins, gntR family GT360_06810 PF04074 YhcH/YjgK/YiaL GT360_06815 PF00672 HAMP domain GT360_06815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT360_06820 PF02615 Malate/L-lactate dehydrogenase GT360_06825 PF08240 Alcohol dehydrogenase GroES-like domain GT360_06825 PF00107 Zinc-binding dehydrogenase GT360_06830 PF08125 Mannitol dehydrogenase C-terminal domain GT360_06830 PF01232 Mannitol dehydrogenase Rossmann domain GT360_06840 PF01081 KDPG and KHG aldolase GT360_06845 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GT360_06845 PF13378 Enolase C-terminal domain-like GT360_06860 PF01554 MatE GT360_06865 PF01554 MatE GT360_06875 PF00294 pfkB family carbohydrate kinase GT360_06880 PF00474 Sodium:solute symporter family GT360_06885 PF00171 Aldehyde dehydrogenase family GT360_06895 PF03952 Enolase, N-terminal domain GT360_06895 PF00113 Enolase, C-terminal TIM barrel domain GT360_06905 PF00652 Ricin-type beta-trefoil lectin domain GT360_06915 PF00528 Binding-protein-dependent transport system inner membrane component GT360_06920 PF00528 Binding-protein-dependent transport system inner membrane component GT360_06925 PF00005 ABC transporter GT360_06930 PF01418 Helix-turn-helix domain, rpiR family GT360_06930 PF01380 SIS domain GT360_06935 PF01425 Amidase GT360_06945 PF00266 Aminotransferase class-V GT360_06950 PF07687 Peptidase dimerisation domain GT360_06950 PF01546 Peptidase family M20/M25/M40 GT360_06960 PF02417 Chromate transporter GT360_06965 PF02417 Chromate transporter GT360_06980 PF10672 S-adenosylmethionine-dependent methyltransferase GT360_06980 PF17785 PUA-like domain GT360_06985 PF00708 Acylphosphatase GT360_06990 PF04358 DsrC like protein GT360_06995 PF01027 Inhibitor of apoptosis-promoting Bax1 GT360_07000 PF00005 ABC transporter GT360_07005 PF00528 Binding-protein-dependent transport system inner membrane component GT360_07010 PF00528 Binding-protein-dependent transport system inner membrane component GT360_07015 PF00497 Bacterial extracellular solute-binding proteins, family 3 GT360_07020 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GT360_07020 PF14824 Sirohaem biosynthesis protein central GT360_07020 PF10414 Sirohaem synthase dimerisation region GT360_07030 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term GT360_07030 PF12833 Helix-turn-helix domain GT360_07035 PF02469 Fasciclin domain GT360_07040 PF04461 Protein of unknown function (DUF520) GT360_07045 PF00793 DAHP synthetase I family GT360_07060 PF13509 S1 domain GT360_07060 PF17783 CvfB-like winged helix domain GT360_07065 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF GT360_07065 PF01189 16S rRNA methyltransferase RsmB/F GT360_07065 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF GT360_07070 PF02470 MlaD protein GT360_07075 PF04403 Paraquat-inducible protein A GT360_07080 PF00005 ABC transporter GT360_07080 PF00664 ABC transporter transmembrane region GT360_07085 PF13185 GAF domain GT360_07090 PF04352 ProQ/FINO family GT360_07090 PF17516 ProQ C-terminal domain GT360_07095 PF17804 Tail specific protease N-terminal domain GT360_07095 PF11818 C-terminal domain of tail specific protease (DUF3340) GT360_07095 PF00595 PDZ domain GT360_07095 PF03572 Peptidase family S41 GT360_07105 PF17432 Domain of unknown function (DUF3458_C) ARM repeats GT360_07105 PF01433 Peptidase family M1 domain GT360_07105 PF11940 Domain of unknown function (DUF3458) Ig-like fold GT360_07115 PF05088 Bacterial NAD-glutamate dehydrogenase GT360_07120 PF01180 Dihydroorotate dehydrogenase GT360_07125 PF07126 Cell-division protein ZapC GT360_07130 PF02926 THUMP domain GT360_07130 PF01170 Putative RNA methylase family UPF0020 GT360_07130 PF10672 S-adenosylmethionine-dependent methyltransferase GT360_07150 PF04957 Ribosome modulation factor GT360_07155 PF07977 FabA-like domain GT360_07160 PF13654 AAA domain GT360_07160 PF05362 Lon protease (S16) C-terminal proteolytic domain GT360_07165 PF06303 MatP N-terminal domain GT360_07165 PF17414 MatP C-terminal ribbon-helix-helix domain GT360_07250 PF05840 Bacteriophage replication gene A protein (GPA) GT360_07335 PF00512 His Kinase A (phospho-acceptor) domain GT360_07335 PF01627 Hpt domain GT360_07335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT360_07335 PF00072 Response regulator receiver domain GT360_07335 PF00672 HAMP domain GT360_07335 PF17149 Periplasmic sensor domain found in signal transduction proteins GT360_07350 PF00115 Cytochrome C and Quinol oxidase polypeptide I GT360_07365 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP GT360_07365 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GT360_07375 PF00403 Heavy-metal-associated domain GT360_07390 PF00027 Cyclic nucleotide-binding domain GT360_07390 PF13545 Crp-like helix-turn-helix domain GT360_07395 PF00582 Universal stress protein family GT360_07400 PF01171 PP-loop family GT360_07420 PF08402 TOBE domain GT360_07420 PF00005 ABC transporter GT360_07425 PF00528 Binding-protein-dependent transport system inner membrane component GT360_07430 PF00528 Binding-protein-dependent transport system inner membrane component GT360_07435 PF13416 Bacterial extracellular solute-binding protein GT360_07440 PF13416 Bacterial extracellular solute-binding protein GT360_07445 PF02146 Sir2 family GT360_07465 PF00480 ROK family GT360_07480 PF00877 NlpC/P60 family GT360_07490 PF03881 Fructosamine kinase GT360_07500 PF00677 Lumazine binding domain GT360_07505 PF01554 MatE GT360_07515 PF14743 DNA ligase OB-like domain GT360_07515 PF01068 ATP dependent DNA ligase domain GT360_07525 PF00005 ABC transporter GT360_07530 PF01032 FecCD transport family GT360_07535 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family GT360_07540 PF00300 Histidine phosphatase superfamily (branch 1) GT360_07540 PF00106 short chain dehydrogenase GT360_07545 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase GT360_07550 PF02654 Cobalamin-5-phosphate synthase GT360_07560 PF01613 Flavin reductase like domain GT360_07565 PF13460 NAD(P)H-binding GT360_07570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GT360_07570 PF00529 HlyD membrane-fusion protein of T1SS GT360_07575 PF00873 AcrB/AcrD/AcrF family GT360_07580 PF02321 Outer membrane efflux protein GT360_07590 PF00929 Exonuclease GT360_07590 PF08411 Exonuclease C-terminal GT360_07595 PF03788 LrgA family GT360_07600 PF04172 LrgB-like family GT360_07605 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region GT360_07605 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GT360_07615 PF00939 Sodium:sulfate symporter transmembrane region GT360_07620 PF02222 ATP-grasp domain GT360_07625 PF00034 Cytochrome c GT360_07625 PF03150 Di-haem cytochrome c peroxidase GT360_07625 PF14376 Haem-binding domain GT360_07630 PF05724 Thiopurine S-methyltransferase (TPMT) GT360_07645 PF00691 OmpA family GT360_07645 PF05736 OprF membrane domain GT360_07655 PF00005 ABC transporter GT360_07665 PF06508 Queuosine biosynthesis protein QueC GT360_07670 PF04055 Radical SAM superfamily GT360_07680 PF00583 Acetyltransferase (GNAT) family GT360_07695 PF02028 BCCT, betaine/carnitine/choline family transporter GT360_07700 PF03989 DNA gyrase C-terminal domain, beta-propeller GT360_07700 PF00521 DNA gyrase/topoisomerase IV, subunit A GT360_07710 PF00317 Ribonucleotide reductase, all-alpha domain GT360_07710 PF03477 ATP cone domain GT360_07710 PF02867 Ribonucleotide reductase, barrel domain GT360_07715 PF00268 Ribonucleotide reductase, small chain GT360_07720 PF00111 2Fe-2S iron-sulfur cluster binding domain GT360_07725 PF03466 LysR substrate binding domain GT360_07725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_07735 PF00994 Probable molybdopterin binding domain GT360_07750 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GT360_07755 PF16653 Saccharopine dehydrogenase C-terminal domain GT360_07755 PF03435 Saccharopine dehydrogenase NADP binding domain GT360_07760 PF00202 Aminotransferase class-III GT360_07765 PF03334 Na+/H+ antiporter subunit GT360_07770 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) GT360_07775 PF01899 Na+/H+ ion antiporter subunit GT360_07785 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L GT360_07790 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter GT360_07800 PF06965 Na+/H+ antiporter 1 GT360_07810 PF00005 ABC transporter GT360_07815 PF01554 MatE GT360_07820 PF11066 Protein of unknown function (DUF2867) GT360_07820 PF13460 NAD(P)H-binding GT360_07830 PF07690 Major Facilitator Superfamily GT360_07835 PF00849 RNA pseudouridylate synthase GT360_07835 PF01479 S4 domain GT360_07840 PF03466 LysR substrate binding domain GT360_07840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_07845 PF00753 Metallo-beta-lactamase superfamily GT360_07845 PF14863 Alkyl sulfatase dimerisation GT360_07845 PF14864 Alkyl sulfatase C-terminal GT360_07855 PF04851 Type III restriction enzyme, res subunit GT360_07855 PF00271 Helicase conserved C-terminal domain GT360_07860 PF01386 Ribosomal L25p family GT360_07865 PF00679 Elongation factor G C-terminus GT360_07865 PF14492 Elongation Factor G, domain II GT360_07865 PF03764 Elongation factor G, domain IV GT360_07865 PF00009 Elongation factor Tu GTP binding domain GT360_07865 PF03144 Elongation factor Tu domain 2 GT360_07875 PF01810 LysE type translocator GT360_07880 PF02872 5'-nucleotidase, C-terminal domain GT360_07880 PF00149 Calcineurin-like phosphoesterase GT360_07905 PF01235 Sodium:alanine symporter family GT360_07915 PF00005 ABC transporter GT360_07925 PF00528 Binding-protein-dependent transport system inner membrane component GT360_07930 PF01037 Lrp/AsnC ligand binding domain GT360_07935 PF01810 LysE type translocator GT360_07955 PF02074 Carboxypeptidase Taq (M32) metallopeptidase GT360_07960 PF00248 Aldo/keto reductase family GT360_07980 PF02678 Pirin GT360_07980 PF17954 Quercetinase C-terminal cupin domain GT360_08000 PF01263 Aldose 1-epimerase GT360_08005 PF13416 Bacterial extracellular solute-binding protein GT360_08010 PF00528 Binding-protein-dependent transport system inner membrane component GT360_08015 PF00528 Binding-protein-dependent transport system inner membrane component GT360_08020 PF00005 ABC transporter GT360_08020 PF17912 MalK OB fold domain GT360_08030 PF12729 Four helix bundle sensory module for signal transduction GT360_08030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT360_08030 PF00672 HAMP domain GT360_08040 PF00106 short chain dehydrogenase GT360_08055 PF02607 B12 binding domain GT360_08055 PF02310 B12 binding domain GT360_08055 PF02965 Vitamin B12 dependent methionine synthase, activation domain GT360_08055 PF00809 Pterin binding enzyme GT360_08055 PF02574 Homocysteine S-methyltransferase GT360_08060 PF04320 Protein with unknown function (DUF469) GT360_08065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_08065 PF03466 LysR substrate binding domain GT360_08070 PF00171 Aldehyde dehydrogenase family GT360_08075 PF00202 Aminotransferase class-III GT360_08090 PF00171 Aldehyde dehydrogenase family GT360_08095 PF03553 Na+/H+ antiporter family GT360_08100 PF00202 Aminotransferase class-III GT360_08105 PF03466 LysR substrate binding domain GT360_08105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_08110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_08110 PF03466 LysR substrate binding domain GT360_08120 PF13520 Amino acid permease GT360_08125 PF04371 Porphyromonas-type peptidyl-arginine deiminase GT360_08135 PF05368 NmrA-like family GT360_08150 PF12848 ABC transporter GT360_08150 PF00005 ABC transporter GT360_08160 PF16868 NMT1-like family GT360_08165 PF16745 RsgA N-terminal domain GT360_08165 PF03193 RsgA GTPase GT360_08170 PF01926 50S ribosome-binding GTPase GT360_08175 PF00270 DEAD/DEAH box helicase GT360_08175 PF00271 Helicase conserved C-terminal domain GT360_08190 PF00528 Binding-protein-dependent transport system inner membrane component GT360_08195 PF00571 CBS domain GT360_08195 PF00005 ABC transporter GT360_08205 PF02798 Glutathione S-transferase, N-terminal domain GT360_08205 PF00043 Glutathione S-transferase, C-terminal domain GT360_08215 PF13193 AMP-binding enzyme C-terminal domain GT360_08215 PF16177 Acetyl-coenzyme A synthetase N-terminus GT360_08215 PF00501 AMP-binding enzyme GT360_08220 PF04303 PrpF protein GT360_08225 PF00330 Aconitase family (aconitate hydratase) GT360_08225 PF00694 Aconitase C-terminal domain GT360_08230 PF00285 Citrate synthase, C-terminal domain GT360_08250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_08250 PF03466 LysR substrate binding domain GT360_08255 PF07681 DoxX GT360_08260 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase GT360_08275 PF03466 LysR substrate binding domain GT360_08275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_08280 PF07690 Major Facilitator Superfamily GT360_08305 PF02371 Transposase IS116/IS110/IS902 family GT360_08305 PF01548 Transposase GT360_08335 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GT360_08335 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component GT360_08345 PF03480 Bacterial extracellular solute-binding protein, family 7 GT360_08390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_08390 PF03466 LysR substrate binding domain GT360_08395 PF01938 TRAM domain GT360_08395 PF04055 Radical SAM superfamily GT360_08395 PF00919 Uncharacterized protein family UPF0004 GT360_08410 PF01047 MarR family GT360_08420 PF02322 Cytochrome bd terminal oxidase subunit II GT360_08425 PF01654 Cytochrome bd terminal oxidase subunit I GT360_08440 PF01844 HNH endonuclease GT360_08445 PF00990 Diguanylate cyclase, GGDEF domain GT360_08445 PF08448 PAS fold GT360_08480 PF13533 Biotin-lipoyl like GT360_08485 PF00664 ABC transporter transmembrane region GT360_08485 PF00005 ABC transporter GT360_08490 PF00664 ABC transporter transmembrane region GT360_08490 PF00005 ABC transporter GT360_08490 PF03412 Peptidase C39 family GT360_08500 PF00873 AcrB/AcrD/AcrF family GT360_08520 PF00589 Phage integrase family GT360_08520 PF14659 Phage integrase, N-terminal SAM-like domain GT360_08565 PF00171 Aldehyde dehydrogenase family GT360_08570 PF00378 Enoyl-CoA hydratase/isomerase GT360_08575 PF02515 CoA-transferase family III GT360_08580 PF02515 CoA-transferase family III GT360_08615 PF00881 Nitroreductase family GT360_08630 PF06945 Protein of unknown function (DUF1289) GT360_08645 PF00849 RNA pseudouridylate synthase GT360_08650 PF13396 Phospholipase_D-nuclease N-terminal GT360_08650 PF13091 PLD-like domain GT360_08655 PF01053 Cys/Met metabolism PLP-dependent enzyme GT360_08665 PF13673 Acetyltransferase (GNAT) domain GT360_08665 PF13302 Acetyltransferase (GNAT) domain GT360_08665 PF03352 Methyladenine glycosylase GT360_08665 PF00117 Glutamine amidotransferase class-I GT360_08665 PF00958 GMP synthase C terminal domain GT360_08670 PF00873 AcrB/AcrD/AcrF family GT360_08675 PF13533 Biotin-lipoyl like GT360_08695 PF04012 PspA/IM30 family GT360_08700 PF02954 Bacterial regulatory protein, Fis family GT360_08700 PF00158 Sigma-54 interaction domain GT360_08705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GT360_08710 PF00528 Binding-protein-dependent transport system inner membrane component GT360_08715 PF12911 N-terminal TM domain of oligopeptide transport permease C GT360_08715 PF00528 Binding-protein-dependent transport system inner membrane component GT360_08720 PF00005 ABC transporter GT360_08720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GT360_08725 PF00005 ABC transporter GT360_08740 PF12706 Beta-lactamase superfamily domain GT360_08745 PF00440 Bacterial regulatory proteins, tetR family GT360_08750 PF01336 OB-fold nucleic acid binding domain GT360_08750 PF00152 tRNA synthetases class II (D, K and N) GT360_08755 PF00990 Diguanylate cyclase, GGDEF domain GT360_08755 PF17158 Membrane-associated sensor, integral membrane domain GT360_08760 PF00155 Aminotransferase class I and II GT360_08765 PF03949 Malic enzyme, NAD binding domain GT360_08765 PF00390 Malic enzyme, N-terminal domain GT360_08775 PF02698 DUF218 domain GT360_08785 PF03616 Sodium/glutamate symporter GT360_08790 PF04226 Transglycosylase associated protein GT360_08800 PF00271 Helicase conserved C-terminal domain GT360_08800 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold GT360_08800 PF04408 Helicase associated domain (HA2) GT360_08800 PF11898 Domain of unknown function (DUF3418) GT360_08800 PF00270 DEAD/DEAH box helicase GT360_08805 PF00403 Heavy-metal-associated domain GT360_08810 PF00528 Binding-protein-dependent transport system inner membrane component GT360_08815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GT360_08820 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GT360_08820 PF00005 ABC transporter GT360_08825 PF00005 ABC transporter GT360_08825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GT360_08850 PF01259 SAICAR synthetase GT360_08855 PF00270 DEAD/DEAH box helicase GT360_08855 PF00271 Helicase conserved C-terminal domain GT360_08865 PF00571 CBS domain GT360_08880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT360_08880 PF00512 His Kinase A (phospho-acceptor) domain GT360_08880 PF09308 LuxQ, periplasmic GT360_08880 PF00072 Response regulator receiver domain GT360_08885 PF01740 STAS domain GT360_08890 PF00691 OmpA family GT360_08915 PF00158 Sigma-54 interaction domain GT360_08915 PF02954 Bacterial regulatory protein, Fis family GT360_08915 PF00072 Response regulator receiver domain GT360_08920 PF00534 Glycosyl transferases group 1 GT360_08920 PF13439 Glycosyltransferase Family 4 GT360_08925 PF17810 Arginine decarboxylase helical bundle domain GT360_08925 PF17944 Arginine decarboxylase C-terminal helical extension GT360_08925 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GT360_08930 PF00491 Arginase family GT360_08935 PF00534 Glycosyl transferases group 1 GT360_08935 PF13439 Glycosyltransferase Family 4 GT360_08955 PF12464 Maltose acetyltransferase GT360_08955 PF14602 Hexapeptide repeat of succinyl-transferase GT360_08955 PF00132 Bacterial transferase hexapeptide (six repeats) GT360_08970 PF13439 Glycosyltransferase Family 4 GT360_08970 PF00534 Glycosyl transferases group 1 GT360_08975 PF00535 Glycosyl transferase family 2 GT360_08980 PF02397 Bacterial sugar transferase GT360_08995 PF00990 Diguanylate cyclase, GGDEF domain GT360_08995 PF17151 Periplasmic sensor domain GT360_09015 PF00465 Iron-containing alcohol dehydrogenase GT360_09015 PF00171 Aldehyde dehydrogenase family GT360_09020 PF08212 Lipocalin-like domain GT360_09025 PF07687 Peptidase dimerisation domain GT360_09025 PF01546 Peptidase family M20/M25/M40 GT360_09050 PF00860 Permease family GT360_09055 PF07995 Glucose / Sorbosone dehydrogenase GT360_09065 PF17158 Membrane-associated sensor, integral membrane domain GT360_09065 PF00990 Diguanylate cyclase, GGDEF domain GT360_09070 PF00561 alpha/beta hydrolase fold GT360_09075 PF12833 Helix-turn-helix domain GT360_09075 PF02805 Metal binding domain of Ada GT360_09080 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GT360_09080 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GT360_09085 PF00375 Sodium:dicarboxylate symporter family GT360_09090 PF00875 DNA photolyase GT360_09090 PF03441 FAD binding domain of DNA photolyase GT360_09095 PF04279 Intracellular septation protein A GT360_09100 PF03061 Thioesterase superfamily GT360_09105 PF03795 YCII-related domain GT360_09135 PF03649 Uncharacterised protein family (UPF0014) GT360_09140 PF01177 Asp/Glu/Hydantoin racemase GT360_09145 PF00881 Nitroreductase family GT360_09150 PF02833 DHHA2 domain GT360_09150 PF01368 DHH family GT360_09160 PF13406 Transglycosylase SLT domain GT360_09165 PF05166 YcgL domain GT360_09175 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GT360_09180 PF03776 Septum formation topological specificity factor MinE GT360_09185 PF00266 Aminotransferase class-V GT360_09195 PF00989 PAS fold GT360_09195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT360_09195 PF00512 His Kinase A (phospho-acceptor) domain GT360_09210 PF04993 TfoX N-terminal domain GT360_09210 PF04994 TfoX C-terminal domain GT360_09220 PF03956 Lysine exporter LysO GT360_09230 PF00282 Pyridoxal-dependent decarboxylase conserved domain GT360_09235 PF01380 SIS domain GT360_09235 PF01418 Helix-turn-helix domain, rpiR family GT360_09240 PF00465 Iron-containing alcohol dehydrogenase GT360_09245 PF00462 Glutaredoxin GT360_09250 PF06826 Predicted Permease Membrane Region GT360_09250 PF02080 TrkA-C domain GT360_09255 PF01502 Phosphoribosyl-AMP cyclohydrolase GT360_09255 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase GT360_09260 PF00977 Histidine biosynthesis protein GT360_09265 PF00664 ABC transporter transmembrane region GT360_09265 PF00005 ABC transporter GT360_09270 PF01243 Pyridoxamine 5'-phosphate oxidase GT360_09275 PF06228 Haem utilisation ChuX/HutX GT360_09280 PF04055 Radical SAM superfamily GT360_09285 PF01497 Periplasmic binding protein GT360_09290 PF01032 FecCD transport family GT360_09295 PF00005 ABC transporter GT360_09305 PF00593 TonB dependent receptor GT360_09305 PF07715 TonB-dependent Receptor Plug Domain GT360_09325 PF00977 Histidine biosynthesis protein GT360_09330 PF00117 Glutamine amidotransferase class-I GT360_09335 PF00475 Imidazoleglycerol-phosphate dehydratase GT360_09335 PF08645 Polynucleotide kinase 3 phosphatase GT360_09340 PF00155 Aminotransferase class I and II GT360_09345 PF00815 Histidinol dehydrogenase GT360_09350 PF08029 HisG, C-terminal domain GT360_09350 PF01634 ATP phosphoribosyltransferase GT360_09360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT360_09360 PF09308 LuxQ, periplasmic GT360_09360 PF00512 His Kinase A (phospho-acceptor) domain GT360_09360 PF00072 Response regulator receiver domain GT360_09370 PF13426 PAS domain GT360_09370 PF00990 Diguanylate cyclase, GGDEF domain GT360_09370 PF00563 EAL domain GT360_09395 PF07733 Bacterial DNA polymerase III alpha NTPase domain GT360_09395 PF14579 Helix-hairpin-helix motif GT360_09395 PF02811 PHP domain GT360_09395 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GT360_09395 PF01336 OB-fold nucleic acid binding domain GT360_09430 PF05728 Uncharacterised protein family (UPF0227) GT360_09435 PF08139 Prokaryotic membrane lipoprotein lipid attachment site GT360_09435 PF13036 Peptidoglycan-synthase activator LpoB GT360_09450 PF01230 HIT domain GT360_09455 PF00672 HAMP domain GT360_09455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT360_09465 PF00392 Bacterial regulatory proteins, gntR family GT360_09465 PF07840 FadR C-terminal domain GT360_09475 PF02600 Disulfide bond formation protein DsbB GT360_09480 PF13491 4TM region of DNA translocase FtsK/SpoIIIE GT360_09480 PF09397 Ftsk gamma domain GT360_09480 PF01580 FtsK/SpoIIIE family GT360_09480 PF17854 FtsK alpha domain GT360_09485 PF01037 Lrp/AsnC ligand binding domain GT360_09490 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GT360_09490 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GT360_09495 PF04217 Protein of unknown function, DUF412 GT360_09500 PF00871 Acetokinase family GT360_09505 PF07085 DRTGG domain GT360_09505 PF01515 Phosphate acetyl/butaryl transferase GT360_09510 PF02581 Thiamine monophosphate synthase GT360_09515 PF02110 Hydroxyethylthiazole kinase family GT360_09520 PF03070 TENA/THI-4/PQQC family GT360_09525 PF09084 NMT1/THI5 like GT360_09530 PF00528 Binding-protein-dependent transport system inner membrane component GT360_09535 PF00005 ABC transporter GT360_09540 PF08543 Phosphomethylpyrimidine kinase GT360_09545 PF00384 Molybdopterin oxidoreductase GT360_09545 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GT360_09545 PF04324 BFD-like [2Fe-2S] binding domain GT360_09545 PF01568 Molydopterin dinucleotide binding domain GT360_09550 PF14824 Sirohaem biosynthesis protein central GT360_09550 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GT360_09550 PF10414 Sirohaem synthase dimerisation region GT360_09555 PF07992 Pyridine nucleotide-disulphide oxidoreductase GT360_09555 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GT360_09555 PF18267 Rubredoxin NAD+ reductase C-terminal domain GT360_09555 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GT360_09555 PF04324 BFD-like [2Fe-2S] binding domain GT360_09565 PF07690 Major Facilitator Superfamily GT360_09570 PF03793 PASTA domain GT360_09570 PF00069 Protein kinase domain GT360_09585 PF00854 POT family GT360_09600 PF01717 Cobalamin-independent synthase, Catalytic domain GT360_09600 PF08267 Cobalamin-independent synthase, N-terminal domain GT360_09605 PF03466 LysR substrate binding domain GT360_09605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_09620 PF08497 Radical SAM N-terminal GT360_09620 PF04055 Radical SAM superfamily GT360_09620 PF11842 Domain of unknown function (DUF3362) GT360_09630 PF13533 Biotin-lipoyl like GT360_09660 PF00384 Molybdopterin oxidoreductase GT360_09660 PF01568 Molydopterin dinucleotide binding domain GT360_09660 PF18364 Molybdopterin oxidoreductase N-terminal domain GT360_09665 PF03264 NapC/NirT cytochrome c family, N-terminal region GT360_09670 PF06796 Periplasmic nitrate reductase protein NapE GT360_09685 PF10431 C-terminal, D2-small domain, of ClpB protein GT360_09685 PF17871 AAA lid domain GT360_09685 PF07724 AAA domain (Cdc48 subfamily) GT360_09685 PF00004 ATPase family associated with various cellular activities (AAA) GT360_09685 PF02861 Clp amino terminal domain, pathogenicity island component GT360_09690 PF02617 ATP-dependent Clp protease adaptor protein ClpS GT360_09695 PF00313 'Cold-shock' DNA-binding domain GT360_09700 PF03971 Monomeric isocitrate dehydrogenase GT360_09705 PF00849 RNA pseudouridylate synthase GT360_09710 PF12241 Trans-2-enoyl-CoA reductase catalytic region GT360_09710 PF07055 Enoyl reductase FAD binding domain GT360_09710 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase GT360_09715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GT360_09715 PF02770 Acyl-CoA dehydrogenase, middle domain GT360_09715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GT360_09715 PF09317 Domain of unknown function (DUF1974) GT360_09720 PF16295 Tetracyclin repressor-like, C-terminal domain GT360_09720 PF00440 Bacterial regulatory proteins, tetR family GT360_09730 PF00672 HAMP domain GT360_09730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT360_09735 PF03372 Endonuclease/Exonuclease/phosphatase family GT360_09740 PF00528 Binding-protein-dependent transport system inner membrane component GT360_09745 PF00528 Binding-protein-dependent transport system inner membrane component GT360_09750 PF00497 Bacterial extracellular solute-binding proteins, family 3 GT360_09755 PF00005 ABC transporter GT360_09770 PF02901 Pyruvate formate lyase-like GT360_09770 PF01228 Glycine radical GT360_09780 PF04055 Radical SAM superfamily GT360_09795 PF06798 PrkA serine protein kinase C-terminal domain GT360_09795 PF08298 PrkA AAA domain GT360_09800 PF04285 Protein of unknown function (DUF444) GT360_09805 PF04293 SpoVR like protein GT360_09810 PF02348 Cytidylyltransferase GT360_09815 PF03966 Trm112p-like protein GT360_09820 PF02606 Tetraacyldisaccharide-1-P 4'-kinase GT360_09825 PF00005 ABC transporter GT360_09825 PF00664 ABC transporter transmembrane region GT360_09830 PF03772 Competence protein GT360_09830 PF00753 Metallo-beta-lactamase superfamily GT360_09840 PF02687 FtsX-like permease family GT360_09840 PF12704 MacB-like periplasmic core domain GT360_09845 PF00005 ABC transporter GT360_09850 PF02687 FtsX-like permease family GT360_09850 PF12704 MacB-like periplasmic core domain GT360_09860 PF02559 CarD-like/TRCF domain GT360_09860 PF03461 TRCF domain GT360_09860 PF17757 UvrB interaction domain GT360_09860 PF00271 Helicase conserved C-terminal domain GT360_09860 PF00270 DEAD/DEAH box helicase GT360_09875 PF00106 short chain dehydrogenase GT360_09885 PF01751 Toprim domain GT360_09885 PF01131 DNA topoisomerase GT360_09890 PF00462 Glutaredoxin GT360_09895 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GT360_09895 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GT360_09910 PF01451 Low molecular weight phosphotyrosine protein phosphatase GT360_09915 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP GT360_09915 PF12557 Cob(I)alamin adenosyltransferase N terminal GT360_09920 PF02798 Glutathione S-transferase, N-terminal domain GT360_09925 PF00893 Small Multidrug Resistance protein GT360_09935 PF16875 Glycosyl hydrolase family 36 N-terminal domain GT360_09935 PF16874 Glycosyl hydrolase family 36 C-terminal domain GT360_09940 PF02264 LamB porin GT360_09950 PF02929 Beta galactosidase small chain GT360_09950 PF00703 Glycosyl hydrolases family 2 GT360_09950 PF02836 Glycosyl hydrolases family 2, TIM barrel domain GT360_09950 PF02837 Glycosyl hydrolases family 2, sugar binding domain GT360_09950 PF16353 Domain of unknown function(DUF4981) GT360_09955 PF00356 Bacterial regulatory proteins, lacI family GT360_09965 PF13662 Toprim domain GT360_09965 PF02132 RecR protein GT360_09970 PF02575 YbaB/EbfC DNA-binding family GT360_09975 PF12170 DNA polymerase III tau subunit V interacting with alpha GT360_09975 PF12169 DNA polymerase III subunits gamma and tau domain III GT360_09975 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding GT360_09980 PF00156 Phosphoribosyl transferase domain GT360_09985 PF04304 Protein of unknown function (DUF454) GT360_09995 PF00072 Response regulator receiver domain GT360_10000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_10000 PF03466 LysR substrate binding domain GT360_10005 PF00881 Nitroreductase family GT360_10010 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GT360_10010 PF00378 Enoyl-CoA hydratase/isomerase GT360_10010 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GT360_10015 PF00108 Thiolase, N-terminal domain GT360_10015 PF02803 Thiolase, C-terminal domain GT360_10020 PF04542 Sigma-70 region 2 GT360_10020 PF08281 Sigma-70, region 4 GT360_10030 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) GT360_10035 PF00171 Aldehyde dehydrogenase family GT360_10035 PF00465 Iron-containing alcohol dehydrogenase GT360_10040 PF01914 MarC family integral membrane protein GT360_10045 PF00520 Ion transport protein GT360_10045 PF00027 Cyclic nucleotide-binding domain GT360_10050 PF02774 Semialdehyde dehydrogenase, dimerisation domain GT360_10050 PF01118 Semialdehyde dehydrogenase, NAD binding domain GT360_10070 PF07208 Protein of unknown function (DUF1414) GT360_10075 PF11893 Domain of unknown function (DUF3413) GT360_10075 PF00884 Sulfatase GT360_10085 PF00893 Small Multidrug Resistance protein GT360_10110 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GT360_10115 PF09619 Type III secretion system lipoprotein chaperone (YscW) GT360_10130 PF13404 AsnC-type helix-turn-helix domain GT360_10130 PF01037 Lrp/AsnC ligand binding domain GT360_10135 PF00291 Pyridoxal-phosphate dependent enzyme GT360_10145 PF03466 LysR substrate binding domain GT360_10145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_10155 PF00485 Phosphoribulokinase / Uridine kinase family GT360_10160 PF10609 NUBPL iron-transfer P-loop NTPase GT360_10165 PF09334 tRNA synthetases class I (M) GT360_10165 PF01588 Putative tRNA binding domain GT360_10175 PF01048 Phosphorylase superfamily GT360_10180 PF01554 MatE GT360_10185 PF01743 Poly A polymerase head domain GT360_10185 PF01368 DHH family GT360_10185 PF00571 CBS domain GT360_10185 PF02272 DHHA1 domain GT360_10190 PF02391 MoaE protein GT360_10195 PF02597 ThiS family GT360_10200 PF01967 MoaC family GT360_10205 PF00994 Probable molybdopterin binding domain GT360_10210 PF06463 Molybdenum Cofactor Synthesis C GT360_10210 PF04055 Radical SAM superfamily GT360_10215 PF01933 Uncharacterised protein family UPF0052 GT360_10220 PF01627 Hpt domain GT360_10225 PF02954 Bacterial regulatory protein, Fis family GT360_10225 PF00158 Sigma-54 interaction domain GT360_10225 PF00072 Response regulator receiver domain GT360_10230 PF00271 Helicase conserved C-terminal domain GT360_10230 PF04851 Type III restriction enzyme, res subunit GT360_10230 PF02151 UvrB/uvrC motif GT360_10230 PF17757 UvrB interaction domain GT360_10230 PF12344 Ultra-violet resistance protein B GT360_10240 PF02508 Rnf-Nqr subunit, membrane protein GT360_10245 PF04060 Putative Fe-S cluster GT360_10250 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit GT360_10250 PF13375 RnfC Barrel sandwich hybrid domain GT360_10250 PF10531 SLBB domain GT360_10250 PF12838 4Fe-4S dicluster domain GT360_10255 PF03116 NQR2, RnfD, RnfE family GT360_10265 PF02508 Rnf-Nqr subunit, membrane protein GT360_10270 PF10576 Iron-sulfur binding domain of endonuclease III GT360_10270 PF00633 Helix-hairpin-helix motif GT360_10270 PF00730 HhH-GPD superfamily base excision DNA repair protein GT360_10275 PF02798 Glutathione S-transferase, N-terminal domain GT360_10275 PF00043 Glutathione S-transferase, C-terminal domain GT360_10280 PF12729 Four helix bundle sensory module for signal transduction GT360_10280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT360_10280 PF00672 HAMP domain GT360_10285 PF00689 Cation transporting ATPase, C-terminus GT360_10285 PF00690 Cation transporter/ATPase, N-terminus GT360_10290 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GT360_10295 PF00691 OmpA family GT360_10295 PF18393 MotY N-terminal domain GT360_10300 PF00929 Exonuclease GT360_10305 PF13726 Na+-H+ antiporter family GT360_10305 PF03553 Na+/H+ antiporter family GT360_10310 PF02629 CoA binding domain GT360_10310 PF00549 CoA-ligase GT360_10315 PF08442 ATP-grasp domain GT360_10315 PF00549 CoA-ligase GT360_10320 PF00364 Biotin-requiring enzyme GT360_10320 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GT360_10320 PF02817 e3 binding domain GT360_10325 PF16078 2-oxoglutarate dehydrogenase N-terminus GT360_10325 PF16870 2-oxoglutarate dehydrogenase C-terminal GT360_10325 PF02779 Transketolase, pyrimidine binding domain GT360_10325 PF00676 Dehydrogenase E1 component GT360_10330 PF13085 2Fe-2S iron-sulfur cluster binding domain GT360_10335 PF02910 Fumarate reductase flavoprotein C-term GT360_10335 PF00890 FAD binding domain GT360_10340 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GT360_10345 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GT360_10350 PF00285 Citrate synthase, C-terminal domain GT360_10355 PF01784 NIF3 (NGG1p interacting factor 3) GT360_10370 PF00121 Triosephosphate isomerase GT360_10375 PF02734 DAK2 domain GT360_10380 PF02733 Dak1 domain GT360_10385 PF02502 Ribose/Galactose Isomerase GT360_10390 PF00392 Bacterial regulatory proteins, gntR family GT360_10390 PF07729 FCD domain GT360_10395 PF00456 Transketolase, thiamine diphosphate binding domain GT360_10400 PF13292 1-deoxy-D-xylulose-5-phosphate synthase GT360_10400 PF02779 Transketolase, pyrimidine binding domain GT360_10400 PF02780 Transketolase, C-terminal domain GT360_10425 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GT360_10425 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GT360_10430 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GT360_10430 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GT360_10430 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GT360_10430 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GT360_10435 PF17206 SeqA protein N-terminal domain GT360_10435 PF03925 SeqA protein C-terminal domain GT360_10440 PF12697 Alpha/beta hydrolase family GT360_10450 PF00258 Flavodoxin GT360_10460 PF01475 Ferric uptake regulator family GT360_10465 PF01195 Peptidyl-tRNA hydrolase GT360_10470 PF06071 Protein of unknown function (DUF933) GT360_10470 PF01926 50S ribosome-binding GTPase GT360_10570 PF00700 Bacterial flagellin C-terminal helical region GT360_10570 PF07196 Flagellin hook IN motif GT360_10570 PF00669 Bacterial flagellin N-terminal helical region GT360_10580 PF07196 Flagellin hook IN motif GT360_10580 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GT360_10585 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase GT360_10585 PF10135 Rod binding protein GT360_10595 PF02107 Flagellar L-ring protein GT360_10600 PF00460 Flagella basal body rod protein GT360_10600 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GT360_10605 PF00460 Flagella basal body rod protein GT360_10605 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GT360_10610 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GT360_10610 PF07559 Flagellar basal body protein FlaE GT360_10610 PF00460 Flagella basal body rod protein GT360_10615 PF13860 FlgD Ig-like domain GT360_10615 PF13861 FlgD Tudor-like domain GT360_10615 PF03963 Flagellar hook capping protein - N-terminal region GT360_10620 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GT360_10620 PF00460 Flagella basal body rod protein GT360_10625 PF00460 Flagella basal body rod protein GT360_10630 PF01739 CheR methyltransferase, SAM binding domain GT360_10630 PF03705 CheR methyltransferase, all-alpha domain GT360_10635 PF00072 Response regulator receiver domain GT360_10635 PF01584 CheW-like domain GT360_10640 PF13144 Chaperone for flagella basal body P-ring formation GT360_10670 PF00691 OmpA family GT360_10670 PF01389 OmpA-like transmembrane domain GT360_10675 PF00749 tRNA synthetases class I (E and Q), catalytic domain GT360_10685 PF03573 outer membrane porin, OprD family GT360_10690 PF00403 Heavy-metal-associated domain GT360_10705 PF02838 Glycosyl hydrolase family 20, domain 2 GT360_10705 PF03173 Putative carbohydrate binding domain GT360_10705 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain GT360_10705 PF00728 Glycosyl hydrolase family 20, catalytic domain GT360_10725 PF01713 Smr domain GT360_10730 PF01479 S4 domain GT360_10730 PF00849 RNA pseudouridylate synthase GT360_10740 PF00586 AIR synthase related protein, N-terminal domain GT360_10740 PF02769 AIR synthase related protein, C-terminal domain GT360_10745 PF00551 Formyl transferase GT360_10750 PF13230 Glutamine amidotransferases class-II GT360_10755 PF13580 SIS domain GT360_10760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GT360_10760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GT360_10760 PF09317 Domain of unknown function (DUF1974) GT360_10770 PF00929 Exonuclease GT360_10775 PF00075 RNase H GT360_10780 PF00990 Diguanylate cyclase, GGDEF domain GT360_10780 PF17152 Periplasmic sensor domain GT360_10790 PF08241 Methyltransferase domain GT360_10795 PF16123 Hydroxyacylglutathione hydrolase C-terminus GT360_10800 PF01464 Transglycosylase SLT domain GT360_10800 PF01476 LysM domain GT360_10810 PF03372 Endonuclease/Exonuclease/phosphatase family GT360_10815 PF00543 Nitrogen regulatory protein P-II GT360_10820 PF00034 Cytochrome c GT360_10825 PF01171 PP-loop family GT360_10825 PF09179 TilS substrate binding domain GT360_10825 PF11734 TilS substrate C-terminal domain GT360_10830 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit GT360_10835 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GT360_10835 PF07733 Bacterial DNA polymerase III alpha NTPase domain GT360_10835 PF14579 Helix-hairpin-helix motif GT360_10835 PF02811 PHP domain GT360_10835 PF01336 OB-fold nucleic acid binding domain GT360_10840 PF01351 Ribonuclease HII GT360_10845 PF02684 Lipid-A-disaccharide synthetase GT360_10850 PF00132 Bacterial transferase hexapeptide (six repeats) GT360_10850 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 GT360_10855 PF07977 FabA-like domain GT360_10860 PF00132 Bacterial transferase hexapeptide (six repeats) GT360_10860 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD GT360_10865 PF03938 Outer membrane protein (OmpH-like) GT360_10870 PF07244 Surface antigen variable number repeat GT360_10870 PF01103 Surface antigen GT360_10875 PF17820 PDZ domain GT360_10875 PF02163 Peptidase family M50 GT360_10880 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase GT360_10880 PF13288 DXP reductoisomerase C-terminal domain GT360_10880 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain GT360_10890 PF01255 Putative undecaprenyl diphosphate synthase GT360_10895 PF01765 Ribosome recycling factor GT360_10900 PF00696 Amino acid kinase family GT360_10905 PF00889 Elongation factor TS GT360_10910 PF00318 Ribosomal protein S2 GT360_10915 PF00557 Metallopeptidase family M24 GT360_10925 PF11944 Protein of unknown function (DUF3461) GT360_10930 PF04608 Phosphatidylglycerophosphatase A GT360_10935 PF02769 AIR synthase related protein, C-terminal domain GT360_10935 PF00586 AIR synthase related protein, N-terminal domain GT360_10945 PF00885 6,7-dimethyl-8-ribityllumazine synthase GT360_10950 PF00925 GTP cyclohydrolase II GT360_10950 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GT360_10955 PF00677 Lumazine binding domain GT360_10960 PF01872 RibD C-terminal domain GT360_10960 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GT360_10965 PF03477 ATP cone domain GT360_10970 PF00171 Aldehyde dehydrogenase family GT360_10975 PF01472 PUA domain GT360_10975 PF00696 Amino acid kinase family GT360_10980 PF07417 Sigma factor-binding transcriptional regulator Crl GT360_10990 PF00156 Phosphoribosyl transferase domain GT360_10995 PF00860 Permease family GT360_11000 PF01546 Peptidase family M20/M25/M40 GT360_11000 PF07687 Peptidase dimerisation domain GT360_11005 PF08443 RimK-like ATP-grasp domain GT360_11005 PF18030 RimK PreATP-grasp domain GT360_11010 PF18030 RimK PreATP-grasp domain GT360_11010 PF08443 RimK-like ATP-grasp domain GT360_11020 PF00209 Sodium:neurotransmitter symporter family GT360_11030 PF11798 IMS family HHH motif GT360_11030 PF11799 impB/mucB/samB family C-terminal domain GT360_11030 PF00817 impB/mucB/samB family GT360_11035 PF01556 DnaJ C terminal domain GT360_11035 PF00684 DnaJ central domain GT360_11035 PF00226 DnaJ domain GT360_11040 PF00012 Hsp70 protein GT360_11045 PF00375 Sodium:dicarboxylate symporter family GT360_11050 PF01025 GrpE GT360_11060 PF02463 RecF/RecN/SMC N terminal domain GT360_11065 PF04355 SmpA / OmlA family GT360_11070 PF03658 RnfH family Ubiquitin GT360_11075 PF03364 Polyketide cyclase / dehydrase and lipid transport GT360_11080 PF01668 SmpB protein GT360_11090 PF00589 Phage integrase family GT360_11090 PF13356 Arm DNA-binding domain GT360_11110 PF08774 VRR-NUC domain GT360_11110 PF04851 Type III restriction enzyme, res subunit GT360_11115 PF18273 Type III R-M EcoP15I C-terminal domain GT360_11115 PF01555 DNA methylase GT360_11135 PF00589 Phage integrase family GT360_11135 PF13356 Arm DNA-binding domain GT360_11150 PF00664 ABC transporter transmembrane region GT360_11150 PF00005 ABC transporter GT360_11155 PF00570 HRDC domain GT360_11155 PF09382 RQC domain GT360_11155 PF00270 DEAD/DEAH box helicase GT360_11155 PF00271 Helicase conserved C-terminal domain GT360_11155 PF16124 RecQ zinc-binding GT360_11175 PF03193 RsgA GTPase GT360_11180 PF00465 Iron-containing alcohol dehydrogenase GT360_11190 PF00375 Sodium:dicarboxylate symporter family GT360_11195 PF02492 CobW/HypB/UreG, nucleotide-binding domain GT360_11200 PF01730 UreF GT360_11210 PF05194 UreE urease accessory protein, C-terminal domain GT360_11210 PF02814 UreE urease accessory protein, N-terminal domain GT360_11215 PF01979 Amidohydrolase family GT360_11215 PF00449 Urease alpha-subunit, N-terminal domain GT360_11220 PF00699 Urease beta subunit GT360_11225 PF00547 Urease, gamma subunit GT360_11230 PF01774 UreD urease accessory protein GT360_11235 PF00005 ABC transporter GT360_11240 PF00005 ABC transporter GT360_11240 PF12399 Branched-chain amino acid ATP-binding cassette transporter GT360_11250 PF02653 Branched-chain amino acid transport system / permease component GT360_11260 PF00463 Isocitrate lyase family GT360_11265 PF01274 Malate synthase GT360_11270 PF03466 LysR substrate binding domain GT360_11270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_11275 PF10417 C-terminal domain of 1-Cys peroxiredoxin GT360_11275 PF00578 AhpC/TSA family GT360_11280 PF14602 Hexapeptide repeat of succinyl-transferase GT360_11280 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle GT360_11285 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GT360_11285 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GT360_11290 PF16901 C-terminal domain of alpha-glycerophosphate oxidase GT360_11290 PF01266 FAD dependent oxidoreductase GT360_11300 PF00356 Bacterial regulatory proteins, lacI family GT360_11305 PF01547 Bacterial extracellular solute-binding protein GT360_11310 PF00528 Binding-protein-dependent transport system inner membrane component GT360_11315 PF00528 Binding-protein-dependent transport system inner membrane component GT360_11320 PF17912 MalK OB fold domain GT360_11320 PF00005 ABC transporter GT360_11330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_11330 PF03466 LysR substrate binding domain GT360_11335 PF02417 Chromate transporter GT360_11355 PF00437 Type II/IV secretion system protein GT360_11385 PF13629 Pilus formation protein N terminal region GT360_11385 PF00263 Bacterial type II and III secretion system protein GT360_11385 PF04972 BON domain GT360_11410 PF02805 Metal binding domain of Ada GT360_11410 PF12833 Helix-turn-helix domain GT360_11415 PF00501 AMP-binding enzyme GT360_11420 PF14492 Elongation Factor G, domain II GT360_11420 PF00679 Elongation factor G C-terminus GT360_11420 PF03144 Elongation factor Tu domain 2 GT360_11420 PF03764 Elongation factor G, domain IV GT360_11420 PF00009 Elongation factor Tu GTP binding domain GT360_11425 PF18073 Rubredoxin metal binding domain GT360_11435 PF18429 Domain of unknown function (DUF5609) GT360_11445 PF00303 Thymidylate synthase GT360_11455 PF01925 Sulfite exporter TauE/SafE GT360_11460 PF00391 PEP-utilising enzyme, mobile domain GT360_11460 PF05524 PEP-utilising enzyme, N-terminal GT360_11460 PF02896 PEP-utilising enzyme, TIM barrel domain GT360_11460 PF01590 GAF domain GT360_11470 PF02976 DNA mismatch repair enzyme MutH GT360_11485 PF00158 Sigma-54 interaction domain GT360_11485 PF00072 Response regulator receiver domain GT360_11490 PF01336 OB-fold nucleic acid binding domain GT360_11490 PF00152 tRNA synthetases class II (D, K and N) GT360_11500 PF05525 Branched-chain amino acid transport protein GT360_11505 PF05175 Methyltransferase small domain GT360_11510 PF00270 DEAD/DEAH box helicase GT360_11510 PF00271 Helicase conserved C-terminal domain GT360_11530 PF13508 Acetyltransferase (GNAT) domain GT360_11535 PF02036 SCP-2 sterol transfer family GT360_11540 PF00563 EAL domain GT360_11540 PF00990 Diguanylate cyclase, GGDEF domain GT360_11540 PF03707 Bacterial signalling protein N terminal repeat GT360_11545 PF01136 Peptidase family U32 GT360_11550 PF01136 Peptidase family U32 GT360_11560 PF01554 MatE GT360_11570 PF13181 Tetratricopeptide repeat GT360_11570 PF07719 Tetratricopeptide repeat GT360_11575 PF00013 KH domain GT360_11575 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain GT360_11575 PF01138 3' exoribonuclease family, domain 1 GT360_11575 PF03725 3' exoribonuclease family, domain 2 GT360_11575 PF00575 S1 RNA binding domain GT360_11580 PF00312 Ribosomal protein S15 GT360_11600 PF01497 Periplasmic binding protein GT360_11605 PF03458 UPF0126 domain GT360_11610 PF01048 Phosphorylase superfamily GT360_11615 PF01676 Metalloenzyme superfamily GT360_11620 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain GT360_11620 PF02885 Glycosyl transferase family, helical bundle domain GT360_11620 PF00591 Glycosyl transferase family, a/b domain GT360_11625 PF01791 DeoC/LacD family aldolase GT360_11635 PF07670 Nucleoside recognition GT360_11635 PF07662 Na+ dependent nucleoside transporter C-terminus GT360_11635 PF01773 Na+ dependent nucleoside transporter N-terminus GT360_11640 PF01026 TatD related DNase GT360_11655 PF01235 Sodium:alanine symporter family GT360_11670 PF03167 Uracil DNA glycosylase superfamily GT360_11675 PF01261 Xylose isomerase-like TIM barrel GT360_11685 PF00291 Pyridoxal-phosphate dependent enzyme GT360_11685 PF14821 Threonine synthase N terminus GT360_11690 PF00288 GHMP kinases N terminal domain GT360_11690 PF08544 GHMP kinases C terminal GT360_11695 PF00742 Homoserine dehydrogenase GT360_11695 PF03447 Homoserine dehydrogenase, NAD binding domain GT360_11695 PF01842 ACT domain GT360_11695 PF00696 Amino acid kinase family GT360_11695 PF13840 ACT domain GT360_11705 PF03737 Aldolase/RraA GT360_11715 PF00072 Response regulator receiver domain GT360_11715 PF00486 Transcriptional regulatory protein, C terminal GT360_11725 PF00989 PAS fold GT360_11725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT360_11725 PF18415 Histidine kinase receptor ArcB trans-membrane domain GT360_11725 PF00072 Response regulator receiver domain GT360_11725 PF01627 Hpt domain GT360_11725 PF00512 His Kinase A (phospho-acceptor) domain GT360_11730 PF04055 Radical SAM superfamily GT360_11730 PF16199 Radical_SAM C-terminal domain GT360_11735 PF04898 Glutamate synthase central domain GT360_11735 PF01645 Conserved region in glutamate synthase GT360_11735 PF01493 GXGXG motif GT360_11735 PF00310 Glutamine amidotransferases class-II GT360_11740 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GT360_11740 PF07992 Pyridine nucleotide-disulphide oxidoreductase GT360_11745 PF00310 Glutamine amidotransferases class-II GT360_11745 PF04898 Glutamate synthase central domain GT360_11745 PF01493 GXGXG motif GT360_11745 PF01645 Conserved region in glutamate synthase GT360_11750 PF07992 Pyridine nucleotide-disulphide oxidoreductase GT360_11750 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GT360_11760 PF16198 tRNA pseudouridylate synthase B C-terminal domain GT360_11760 PF01509 TruB family pseudouridylate synthase (N terminal domain) GT360_11760 PF09157 Pseudouridine synthase II TruB, C-terminal GT360_11765 PF02033 Ribosome-binding factor A GT360_11770 PF04760 Translation initiation factor IF-2, N-terminal region GT360_11770 PF08364 Bacterial translation initiation factor IF-2 associated region GT360_11770 PF11987 Translation-initiation factor 2 GT360_11770 PF00009 Elongation factor Tu GTP binding domain GT360_11775 PF08529 NusA N-terminal domain GT360_11775 PF00575 S1 RNA binding domain GT360_11775 PF13184 NusA-like KH domain GT360_11780 PF02576 RimP N-terminal domain GT360_11780 PF17384 RimP C-terminal SH3 domain GT360_11795 PF03840 Preprotein translocase SecG subunit GT360_11800 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GT360_11800 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GT360_11800 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GT360_11800 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GT360_11805 PF00809 Pterin binding enzyme GT360_11810 PF06480 FtsH Extracellular GT360_11810 PF00004 ATPase family associated with various cellular activities (AAA) GT360_11810 PF01434 Peptidase family M41 GT360_11810 PF17862 AAA+ lid domain GT360_11820 PF01985 CRS1 / YhbY (CRM) domain GT360_11825 PF01272 Transcription elongation factor, GreA/GreB, C-term GT360_11825 PF03449 Transcription elongation factor, N-terminal GT360_11830 PF13609 Gram-negative porin GT360_11835 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family GT360_11845 PF00579 tRNA synthetases class I (W and Y) GT360_11850 PF01551 Peptidase family M23 GT360_11850 PF04225 Opacity-associated protein A LysM-like domain GT360_11855 PF00873 AcrB/AcrD/AcrF family GT360_11860 PF13533 Biotin-lipoyl like GT360_11865 PF01521 Iron-sulphur cluster biosynthesis GT360_11870 PF00202 Aminotransferase class-III GT360_11875 PF01594 AI-2E family transporter GT360_11880 PF08468 Methyltransferase small domain N-terminal GT360_11880 PF05175 Methyltransferase small domain GT360_11885 PF00072 Response regulator receiver domain GT360_11885 PF09308 LuxQ, periplasmic GT360_11885 PF00512 His Kinase A (phospho-acceptor) domain GT360_11885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT360_11890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GT360_11895 PF00528 Binding-protein-dependent transport system inner membrane component GT360_11900 PF12911 N-terminal TM domain of oligopeptide transport permease C GT360_11900 PF00528 Binding-protein-dependent transport system inner membrane component GT360_11905 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GT360_11905 PF00005 ABC transporter GT360_11910 PF00005 ABC transporter GT360_11910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GT360_11920 PF01869 BadF/BadG/BcrA/BcrD ATPase family GT360_11925 PF00728 Glycosyl hydrolase family 20, catalytic domain GT360_11925 PF02838 Glycosyl hydrolase family 20, domain 2 GT360_11930 PF06165 Glycosyltransferase family 36 GT360_11930 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain GT360_11935 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GT360_11935 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GT360_11935 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GT360_11935 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GT360_11940 PF00005 ABC transporter GT360_11940 PF08402 TOBE domain GT360_11950 PF13416 Bacterial extracellular solute-binding protein GT360_11955 PF00909 Ammonium Transporter Family GT360_11960 PF00543 Nitrogen regulatory protein P-II GT360_11965 PF06062 Uncharacterised protein family (UPF0231) GT360_11970 PF17853 GGDEF-like domain GT360_11970 PF05651 Putative sugar diacid recognition GT360_11970 PF13556 PucR C-terminal helix-turn-helix domain GT360_11975 PF02447 GntP family permease GT360_11980 PF02595 Glycerate kinase family GT360_11985 PF06434 Aconitate hydratase 2 N-terminus GT360_11985 PF11791 Aconitate B N-terminal domain GT360_11985 PF00330 Aconitase family (aconitate hydratase) GT360_11990 PF01734 Patatin-like phospholipase GT360_11995 PF00912 Transglycosylase GT360_11995 PF00905 Penicillin binding protein transpeptidase domain GT360_11995 PF14814 Bifunctional transglycosylase second domain GT360_12000 PF00271 Helicase conserved C-terminal domain GT360_12000 PF08482 ATP-dependent helicase C-terminal GT360_12000 PF00270 DEAD/DEAH box helicase GT360_12000 PF04408 Helicase associated domain (HA2) GT360_12010 PF01258 Prokaryotic dksA/traR C4-type zinc finger GT360_12015 PF00749 tRNA synthetases class I (E and Q), catalytic domain GT360_12020 PF01743 Poly A polymerase head domain GT360_12020 PF12626 Polymerase A arginine-rich C-terminus GT360_12020 PF12627 Probable RNA and SrmB- binding site of polymerase A GT360_12025 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GT360_12030 PF02548 Ketopantoate hydroxymethyltransferase GT360_12035 PF02569 Pantoate-beta-alanine ligase GT360_12040 PF01061 ABC-2 type transporter GT360_12045 PF00005 ABC transporter GT360_12050 PF00916 Sulfate permease family GT360_12050 PF01740 STAS domain GT360_12055 PF00484 Carbonic anhydrase GT360_12060 PF03739 Lipopolysaccharide export system permease LptF/LptG GT360_12065 PF03739 Lipopolysaccharide export system permease LptF/LptG GT360_12070 PF00883 Cytosol aminopeptidase family, catalytic domain GT360_12070 PF02789 Cytosol aminopeptidase family, N-terminal domain GT360_12075 PF04364 DNA polymerase III chi subunit, HolC GT360_12080 PF00133 tRNA synthetases class I (I, L, M and V) GT360_12080 PF08264 Anticodon-binding domain of tRNA GT360_12080 PF10458 Valyl tRNA synthetase tRNA binding arm GT360_12085 PF00156 Phosphoribosyl transferase domain GT360_12090 PF00440 Bacterial regulatory proteins, tetR family GT360_12095 PF07992 Pyridine nucleotide-disulphide oxidoreductase GT360_12095 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GT360_12100 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GT360_12100 PF02817 e3 binding domain GT360_12100 PF00364 Biotin-requiring enzyme GT360_12105 PF00456 Transketolase, thiamine diphosphate binding domain GT360_12105 PF17831 Pyruvate dehydrogenase E1 component middle domain GT360_12110 PF00392 Bacterial regulatory proteins, gntR family GT360_12110 PF07729 FCD domain GT360_12115 PF01368 DHH family GT360_12115 PF02272 DHHA1 domain GT360_12115 PF17768 RecJ OB domain GT360_12120 PF13098 Thioredoxin-like domain GT360_12120 PF10411 Disulfide bond isomerase protein N-terminus GT360_12125 PF00589 Phage integrase family GT360_12125 PF02899 Phage integrase, N-terminal SAM-like domain GT360_12130 PF00258 Flavodoxin GT360_12135 PF01510 N-acetylmuramoyl-L-alanine amidase GT360_12140 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain GT360_12140 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain GT360_12145 PF07963 Prokaryotic N-terminal methylation motif GT360_12145 PF00114 Pilin (bacterial filament) GT360_12150 PF00437 Type II/IV secretion system protein GT360_12150 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain GT360_12155 PF00482 Type II secretion system (T2SS), protein F GT360_12160 PF06750 Bacterial Peptidase A24 N-terminal domain GT360_12160 PF01478 Type IV leader peptidase family GT360_12165 PF01121 Dephospho-CoA kinase GT360_12170 PF07072 Cell division protein GT360_12175 PF03884 DNA gyrase inhibitor YacG GT360_12180 PF01245 Ribosomal protein L19 GT360_12190 PF05239 PRC-barrel domain GT360_12190 PF01782 RimM N-terminal domain GT360_12195 PF00886 Ribosomal protein S16 GT360_12200 PF02978 Signal peptide binding domain GT360_12200 PF02881 SRP54-type protein, helical bundle domain GT360_12200 PF00448 SRP54-type protein, GTPase domain GT360_12205 PF01578 Cytochrome C assembly protein GT360_12210 PF00571 CBS domain GT360_12210 PF01595 Cyclin M transmembrane N-terminal domain GT360_12210 PF03471 Transporter associated domain GT360_12215 PF02664 S-Ribosylhomocysteinase (LuxS) GT360_12225 PF04262 Glutamate-cysteine ligase GT360_12230 PF00675 Insulinase (Peptidase family M16) GT360_12230 PF05193 Peptidase M16 inactive domain GT360_12235 PF09335 SNARE associated Golgi protein GT360_12240 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit GT360_12245 PF00682 HMGL-like GT360_12245 PF00364 Biotin-requiring enzyme GT360_12245 PF02436 Conserved carboxylase domain GT360_12250 PF04277 Oxaloacetate decarboxylase, gamma chain GT360_12305 PF13840 ACT domain GT360_12305 PF01842 ACT domain GT360_12305 PF00696 Amino acid kinase family GT360_12310 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GT360_12310 PF01411 tRNA synthetases class II (A) GT360_12310 PF02272 DHHA1 domain GT360_12315 PF02631 RecX family GT360_12320 PF00154 recA bacterial DNA recombination protein GT360_12325 PF02464 Competence-damaged protein GT360_12330 PF01624 MutS domain I GT360_12330 PF05188 MutS domain II GT360_12330 PF05192 MutS domain III GT360_12330 PF05190 MutS family domain IV GT360_12330 PF00488 MutS domain V GT360_12335 PF04539 Sigma-70 region 3 GT360_12335 PF04542 Sigma-70 region 2 GT360_12335 PF04545 Sigma-70, region 4 GT360_12335 PF00140 Sigma-70 factor, region 1.2 GT360_12340 PF01476 LysM domain GT360_12340 PF01551 Peptidase family M23 GT360_12350 PF01975 Survival protein SurE GT360_12355 PF01142 tRNA pseudouridine synthase D (TruD) GT360_12360 PF02542 YgbB family GT360_12365 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GT360_12370 PF04977 Septum formation initiator GT360_12380 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GT360_12385 PF02152 Dihydroneopterin aldolase GT360_12390 PF02660 Glycerol-3-phosphate acyltransferase GT360_12395 PF00814 Glycoprotease family GT360_12400 PF01165 Ribosomal protein S21 GT360_12405 PF09424 Yqey-like protein GT360_12410 PF08278 DNA primase DnaG DnaB-binding GT360_12410 PF01807 CHC2 zinc finger GT360_12410 PF08275 DNA primase catalytic core, N-terminal domain GT360_12410 PF10410 DnaB-helicase binding domain of primase GT360_12415 PF03979 Sigma-70 factor, region 1.1 GT360_12415 PF00140 Sigma-70 factor, region 1.2 GT360_12415 PF04539 Sigma-70 region 3 GT360_12415 PF04545 Sigma-70, region 4 GT360_12415 PF04546 Sigma-70, non-essential region GT360_12415 PF04542 Sigma-70 region 2 GT360_12430 PF00303 Thymidylate synthase GT360_12445 PF05840 Bacteriophage replication gene A protein (GPA) GT360_12475 PF14659 Phage integrase, N-terminal SAM-like domain GT360_12475 PF00589 Phage integrase family GT360_12480 PF01966 HD domain GT360_12495 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase GT360_12500 PF05068 Mannitol repressor GT360_12505 PF08125 Mannitol dehydrogenase C-terminal domain GT360_12505 PF01232 Mannitol dehydrogenase Rossmann domain GT360_12510 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GT360_12510 PF02378 Phosphotransferase system, EIIC GT360_12510 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GT360_12515 PF13419 Haloacid dehalogenase-like hydrolase GT360_12520 PF01380 SIS domain GT360_12525 PF00455 DeoR C terminal sensor domain GT360_12525 PF08220 DeoR-like helix-turn-helix domain GT360_12530 PF00224 Pyruvate kinase, barrel domain GT360_12530 PF02887 Pyruvate kinase, alpha/beta domain GT360_12535 PF07694 5TMR of 5TMR-LYT GT360_12535 PF00990 Diguanylate cyclase, GGDEF domain GT360_12540 PF04402 Protein of unknown function (DUF541) GT360_12545 PF05552 Conserved TM helix GT360_12545 PF00924 Mechanosensitive ion channel GT360_12550 PF01116 Fructose-bisphosphate aldolase class-II GT360_12555 PF00162 Phosphoglycerate kinase GT360_12560 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GT360_12560 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GT360_12565 PF06877 Regulator of ribonuclease activity B GT360_12575 PF01523 Putative modulator of DNA gyrase GT360_12580 PF00795 Carbon-nitrogen hydrolase GT360_12585 PF13502 AsmA-like C-terminal region GT360_12585 PF13116 Protein of unknown function GT360_12590 PF10150 Ribonuclease E/G family GT360_12590 PF00575 S1 RNA binding domain GT360_12595 PF02545 Maf-like protein GT360_12600 PF04093 rod shape-determining protein MreD GT360_12605 PF04085 rod shape-determining protein MreC GT360_12640 PF07963 Prokaryotic N-terminal methylation motif GT360_12640 PF00114 Pilin (bacterial filament) GT360_12645 PF08334 Type II secretion system (T2SS), protein G GT360_12645 PF07963 Prokaryotic N-terminal methylation motif GT360_12650 PF07963 Prokaryotic N-terminal methylation motif GT360_12650 PF00114 Pilin (bacterial filament) GT360_12660 PF00482 Type II secretion system (T2SS), protein F GT360_12665 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain GT360_12665 PF00437 Type II/IV secretion system protein GT360_12675 PF01471 Putative peptidoglycan binding domain GT360_12675 PF13401 AAA domain GT360_12680 PF07660 Secretin and TonB N terminus short domain GT360_12680 PF00263 Bacterial type II and III secretion system protein GT360_12680 PF11741 AMIN domain GT360_12680 PF03958 Bacterial type II/III secretion system short domain GT360_12700 PF17157 Gammaproteobacterial periplasmic sensor domain GT360_12700 PF00990 Diguanylate cyclase, GGDEF domain GT360_12700 PF00563 EAL domain GT360_12705 PF00436 Single-strand binding protein family GT360_12710 PF00196 Bacterial regulatory proteins, luxR family GT360_12715 PF00483 Nucleotidyl transferase GT360_12720 PF00005 ABC transporter GT360_12720 PF17760 UvrA interaction domain GT360_12720 PF17755 UvrA DNA-binding domain GT360_12730 PF00266 Aminotransferase class-V GT360_12735 PF01842 ACT domain GT360_12735 PF00696 Amino acid kinase family GT360_12740 PF00809 Pterin binding enzyme GT360_12740 PF02574 Homocysteine S-methyltransferase GT360_12740 PF02607 B12 binding domain GT360_12740 PF02965 Vitamin B12 dependent methionine synthase, activation domain GT360_12740 PF02310 B12 binding domain GT360_12795 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GT360_12795 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GT360_12800 PF00667 FAD binding domain GT360_12800 PF00258 Flavodoxin GT360_12800 PF00175 Oxidoreductase NAD-binding domain GT360_12815 PF01207 Dihydrouridine synthase (Dus) GT360_12820 PF00589 Phage integrase family GT360_12855 PF00582 Universal stress protein family GT360_12860 PF01475 Ferric uptake regulator family GT360_12870 PF00342 Phosphoglucose isomerase GT360_12875 PF01894 Uncharacterised protein family UPF0047 GT360_12885 PF01168 Alanine racemase, N-terminal domain GT360_12885 PF00842 Alanine racemase, C-terminal domain GT360_12890 PF00772 DnaB-like helicase N terminal domain GT360_12890 PF03796 DnaB-like helicase C terminal domain GT360_12900 PF01281 Ribosomal protein L9, N-terminal domain GT360_12900 PF03948 Ribosomal protein L9, C-terminal domain GT360_12905 PF01084 Ribosomal protein S18 GT360_12910 PF00436 Single-strand binding protein family GT360_12915 PF01250 Ribosomal protein S6 GT360_12920 PF00009 Elongation factor Tu GTP binding domain GT360_12920 PF03143 Elongation factor Tu C-terminal domain GT360_12920 PF03144 Elongation factor Tu domain 2 GT360_12925 PF00009 Elongation factor Tu GTP binding domain GT360_12925 PF00679 Elongation factor G C-terminus GT360_12925 PF03144 Elongation factor Tu domain 2 GT360_12925 PF03764 Elongation factor G, domain IV GT360_12925 PF14492 Elongation Factor G, domain II GT360_12930 PF00177 Ribosomal protein S7p/S5e GT360_12935 PF00164 Ribosomal protein S12/S23 GT360_12945 PF02635 DsrE/DsrF-like family GT360_12950 PF02635 DsrE/DsrF-like family GT360_12955 PF08348 YheO-like PAS domain GT360_12955 PF13309 HTH domain GT360_12960 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GT360_12960 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GT360_12975 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) GT360_12980 PF01145 SPFH domain / Band 7 family GT360_12985 PF12221 Bacterial membrane protein N terminal GT360_12985 PF01145 SPFH domain / Band 7 family GT360_12990 PF01926 50S ribosome-binding GTPase GT360_12990 PF13167 GTP-binding GTPase N-terminal GT360_12990 PF16360 GTP-binding GTPase Middle Region GT360_12995 PF17209 Hfq protein GT360_13005 PF08676 MutL C terminal dimerisation domain GT360_13005 PF01119 DNA mismatch repair protein, C-terminal domain GT360_13010 PF01520 N-acetylmuramoyl-L-alanine amidase GT360_13015 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE GT360_13020 PF08331 Domain of unknown function (DUF1730) GT360_13085 PF00929 Exonuclease GT360_13090 PF03193 RsgA GTPase GT360_13095 PF02666 Phosphatidylserine decarboxylase GT360_13100 PF03600 Citrate transporter GT360_13100 PF02080 TrkA-C domain GT360_13110 PF01676 Metalloenzyme superfamily GT360_13110 PF06415 BPG-independent PGAM N-terminus (iPGM_N) GT360_13115 PF01551 Peptidase family M23 GT360_13120 PF00440 Bacterial regulatory proteins, tetR family GT360_13120 PF08360 QacR-like protein, C-terminal region GT360_13125 PF01208 Uroporphyrinogen decarboxylase (URO-D) GT360_13130 PF09297 NADH pyrophosphatase zinc ribbon domain GT360_13130 PF00293 NUDIX domain GT360_13135 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GT360_13140 PF05000 RNA polymerase Rpb1, domain 4 GT360_13140 PF04998 RNA polymerase Rpb1, domain 5 GT360_13140 PF04997 RNA polymerase Rpb1, domain 1 GT360_13140 PF00623 RNA polymerase Rpb1, domain 2 GT360_13140 PF04983 RNA polymerase Rpb1, domain 3 GT360_13145 PF04565 RNA polymerase Rpb2, domain 3 GT360_13145 PF04563 RNA polymerase beta subunit GT360_13145 PF10385 RNA polymerase beta subunit external 1 domain GT360_13145 PF04561 RNA polymerase Rpb2, domain 2 GT360_13145 PF00562 RNA polymerase Rpb2, domain 6 GT360_13145 PF04560 RNA polymerase Rpb2, domain 7 GT360_13150 PF00542 Ribosomal protein L7/L12 C-terminal domain GT360_13150 PF16320 Ribosomal protein L7/L12 dimerisation domain GT360_13155 PF00466 Ribosomal protein L10 GT360_13160 PF00687 Ribosomal protein L1p/L10e family GT360_13165 PF03946 Ribosomal protein L11, N-terminal domain GT360_13165 PF00298 Ribosomal protein L11, RNA binding domain GT360_13170 PF02357 Transcription termination factor nusG GT360_13170 PF00467 KOW motif GT360_13175 PF00584 SecE/Sec61-gamma subunits of protein translocation complex GT360_13180 PF03143 Elongation factor Tu C-terminal domain GT360_13180 PF00009 Elongation factor Tu GTP binding domain GT360_13180 PF03144 Elongation factor Tu domain 2 GT360_13205 PF00485 Phosphoribulokinase / Uridine kinase family GT360_13220 PF00121 Triosephosphate isomerase GT360_13225 PF01554 MatE GT360_13230 PF03737 Aldolase/RraA GT360_13235 PF01040 UbiA prenyltransferase family GT360_13240 PF09285 Elongation factor P, C-terminal GT360_13240 PF08207 Elongation factor P (EF-P) KOW-like domain GT360_13240 PF01132 Elongation factor P (EF-P) OB domain GT360_13245 PF04055 Radical SAM superfamily GT360_13250 PF02308 MgtC family GT360_13255 PF03605 Anaerobic c4-dicarboxylate membrane transporter GT360_13260 PF12838 4Fe-4S dicluster domain GT360_13260 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GT360_13260 PF00384 Molybdopterin oxidoreductase GT360_13260 PF01568 Molydopterin dinucleotide binding domain GT360_13260 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GT360_13265 PF00579 tRNA synthetases class I (W and Y) GT360_13270 PF13419 Haloacid dehalogenase-like hydrolase GT360_13275 PF00834 Ribulose-phosphate 3 epimerase family GT360_13280 PF02086 D12 class N6 adenine-specific DNA methyltransferase GT360_13290 PF01761 3-dehydroquinate synthase GT360_13295 PF01202 Shikimate kinase GT360_13300 PF11741 AMIN domain GT360_13300 PF07660 Secretin and TonB N terminus short domain GT360_13300 PF03958 Bacterial type II/III secretion system short domain GT360_13300 PF00263 Bacterial type II and III secretion system protein GT360_13325 PF00905 Penicillin binding protein transpeptidase domain GT360_13325 PF17092 Penicillin-binding protein OB-like domain GT360_13325 PF00912 Transglycosylase GT360_13330 PF13091 PLD-like domain GT360_13380 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GT360_13380 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GT360_13380 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GT360_13390 PF02719 Polysaccharide biosynthesis protein GT360_13395 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GT360_13405 PF02397 Bacterial sugar transferase GT360_13425 PF00535 Glycosyl transferase family 2 GT360_13435 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GT360_13435 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GT360_13455 PF02563 Polysaccharide biosynthesis/export protein GT360_13455 PF10531 SLBB domain GT360_13465 PF00953 Glycosyl transferase family 4 GT360_13470 PF00009 Elongation factor Tu GTP binding domain GT360_13490 PF01507 Phosphoadenosine phosphosulfate reductase family GT360_13495 PF03600 Citrate transporter GT360_13495 PF02080 TrkA-C domain GT360_13500 PF00005 ABC transporter GT360_13505 PF00483 Nucleotidyl transferase GT360_13510 PF00535 Glycosyl transferase family 2 GT360_13530 PF00535 Glycosyl transferase family 2 GT360_13550 PF01510 N-acetylmuramoyl-L-alanine amidase GT360_13575 PF13439 Glycosyltransferase Family 4 GT360_13575 PF00534 Glycosyl transferases group 1 GT360_13585 PF16363 GDP-mannose 4,6 dehydratase GT360_13590 PF04321 RmlD substrate binding domain GT360_13605 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase GT360_13610 PF00483 Nucleotidyl transferase GT360_13620 PF01061 ABC-2 type transporter GT360_13625 PF10531 SLBB domain GT360_13625 PF02563 Polysaccharide biosynthesis/export protein GT360_13635 PF01370 NAD dependent epimerase/dehydratase family GT360_13640 PF03279 Bacterial lipid A biosynthesis acyltransferase GT360_13655 PF01075 Glycosyltransferase family 9 (heptosyltransferase) GT360_13675 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) GT360_13680 PF01075 Glycosyltransferase family 9 (heptosyltransferase) GT360_13685 PF05686 Glycosyl transferase family 90 GT360_13695 PF13439 Glycosyltransferase Family 4 GT360_13695 PF00534 Glycosyl transferases group 1 GT360_13700 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) GT360_13705 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain GT360_13705 PF06827 Zinc finger found in FPG and IleRS GT360_13705 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain GT360_13725 PF00271 Helicase conserved C-terminal domain GT360_13725 PF00270 DEAD/DEAH box helicase GT360_13725 PF17191 RecG wedge domain GT360_13730 PF00512 His Kinase A (phospho-acceptor) domain GT360_13730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT360_13730 PF00672 HAMP domain GT360_13735 PF00072 Response regulator receiver domain GT360_13735 PF00486 Transcriptional regulatory protein, C terminal GT360_13740 PF03449 Transcription elongation factor, N-terminal GT360_13740 PF01272 Transcription elongation factor, GreA/GreB, C-term GT360_13750 PF16921 Tex protein YqgF-like domain GT360_13750 PF09371 Tex-like protein N-terminal domain GT360_13750 PF17674 HHH domain GT360_13750 PF00575 S1 RNA binding domain GT360_13760 PF00561 alpha/beta hydrolase fold GT360_13765 PF00156 Phosphoribosyl transferase domain GT360_13770 PF01106 NifU-like domain GT360_13770 PF01521 Iron-sulphur cluster biosynthesis GT360_13780 PF00293 NUDIX domain GT360_13785 PF00459 Inositol monophosphatase family GT360_13790 PF01203 Type II secretion system (T2SS), protein N GT360_13795 PF04612 Type II secretion system (T2SS), protein M GT360_13800 PF05134 Type II secretion system (T2SS), protein L GT360_13800 PF12693 GspL periplasmic domain GT360_13805 PF03934 Type II secretion system (T2SS), protein K GT360_13810 PF07963 Prokaryotic N-terminal methylation motif GT360_13810 PF11612 Type II secretion system (T2SS), protein J GT360_13815 PF02501 Type II secretion system (T2SS), protein I GT360_13815 PF07963 Prokaryotic N-terminal methylation motif GT360_13820 PF12019 Type II transport protein GspH GT360_13825 PF07963 Prokaryotic N-terminal methylation motif GT360_13825 PF08334 Type II secretion system (T2SS), protein G GT360_13830 PF00482 Type II secretion system (T2SS), protein F GT360_13835 PF00437 Type II/IV secretion system protein GT360_13840 PF03958 Bacterial type II/III secretion system short domain GT360_13840 PF00263 Bacterial type II and III secretion system protein GT360_13845 PF11356 Type II secretion system protein C GT360_13850 PF01479 S4 domain GT360_13855 PF01430 Hsp33 protein GT360_13870 PF09500 Putative thioesterase (yiiD_Cterm) GT360_13870 PF00583 Acetyltransferase (GNAT) family GT360_13875 PF02580 D-Tyr-tRNA(Tyr) deacylase GT360_13880 PF03631 Virulence factor BrkB GT360_13900 PF03951 Glutamine synthetase, beta-Grasp domain GT360_13900 PF00120 Glutamine synthetase, catalytic domain GT360_13910 PF00989 PAS fold GT360_13910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT360_13910 PF00512 His Kinase A (phospho-acceptor) domain GT360_13915 PF00158 Sigma-54 interaction domain GT360_13915 PF00072 Response regulator receiver domain GT360_13915 PF02954 Bacterial regulatory protein, Fis family GT360_13920 PF00962 Adenosine/AMP deaminase GT360_13925 PF00691 OmpA family GT360_13925 PF13677 Membrane MotB of proton-channel complex MotA/MotB GT360_13930 PF01618 MotA/TolQ/ExbB proton channel family GT360_13935 PF04545 Sigma-70, region 4 GT360_13935 PF04542 Sigma-70 region 2 GT360_13940 PF03748 Flagellar basal body-associated protein FliL GT360_13955 PF02561 Flagellar protein FliS GT360_13960 PF07196 Flagellin hook IN motif GT360_13960 PF07195 Flagellar hook-associated protein 2 C-terminus GT360_13960 PF02465 Flagellar hook-associated protein 2 N-terminus GT360_13970 PF00669 Bacterial flagellin N-terminal helical region GT360_13970 PF00700 Bacterial flagellin C-terminal helical region GT360_13985 PF00669 Bacterial flagellin N-terminal helical region GT360_13990 PF00460 Flagella basal body rod protein GT360_13990 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GT360_13995 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase GT360_13995 PF10135 Rod binding protein GT360_14000 PF02119 Flagellar P-ring protein GT360_14005 PF02107 Flagellar L-ring protein GT360_14010 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GT360_14010 PF00460 Flagella basal body rod protein GT360_14015 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GT360_14015 PF00460 Flagella basal body rod protein GT360_14020 PF07559 Flagellar basal body protein FlaE GT360_14020 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GT360_14020 PF00460 Flagella basal body rod protein GT360_14025 PF03963 Flagellar hook capping protein - N-terminal region GT360_14025 PF13860 FlgD Ig-like domain GT360_14025 PF13861 FlgD Tudor-like domain GT360_14030 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GT360_14030 PF00460 Flagella basal body rod protein GT360_14035 PF00460 Flagella basal body rod protein GT360_14060 PF18269 T3SS EscN ATPase C-terminal domain GT360_14060 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GT360_14070 PF01706 FliG C-terminal domain GT360_14070 PF14842 FliG N-terminal domain GT360_14070 PF14841 FliG middle domain GT360_14075 PF08345 Flagellar M-ring protein C-terminal GT360_14075 PF01514 Secretory protein of YscJ/FliF family GT360_14080 PF02049 Flagellar hook-basal body complex protein FliE GT360_14085 PF00072 Response regulator receiver domain GT360_14085 PF00158 Sigma-54 interaction domain GT360_14085 PF02954 Bacterial regulatory protein, Fis family GT360_14090 PF00691 OmpA family GT360_14100 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GT360_14105 PF00813 FliP family GT360_14110 PF01313 Bacterial export proteins, family 3 GT360_14115 PF01311 Bacterial export proteins, family 1 GT360_14120 PF01312 FlhB HrpN YscU SpaS Family GT360_14125 PF00771 FHIPEP family GT360_14130 PF00152 tRNA synthetases class II (D, K and N) GT360_14135 PF02910 Fumarate reductase flavoprotein C-term GT360_14135 PF00890 FAD binding domain GT360_14140 PF13085 2Fe-2S iron-sulfur cluster binding domain GT360_14140 PF13183 4Fe-4S dicluster domain GT360_14145 PF02300 Fumarate reductase subunit C GT360_14150 PF02313 Fumarate reductase subunit D GT360_14155 PF03466 LysR substrate binding domain GT360_14155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_14160 PF14864 Alkyl sulfatase C-terminal GT360_14160 PF14863 Alkyl sulfatase dimerisation GT360_14160 PF00753 Metallo-beta-lactamase superfamily GT360_14185 PF00356 Bacterial regulatory proteins, lacI family GT360_14190 PF18074 Primosomal protein N C-terminal domain GT360_14190 PF17764 3′ DNA-binding domain (3′BD) GT360_14190 PF18319 PriA DNA helicase Cys-rich region (CRR) domain GT360_14190 PF00271 Helicase conserved C-terminal domain GT360_14190 PF00270 DEAD/DEAH box helicase GT360_14200 PF03949 Malic enzyme, NAD binding domain GT360_14200 PF00390 Malic enzyme, N-terminal domain GT360_14205 PF03793 PASTA domain GT360_14205 PF00069 Protein kinase domain GT360_14225 PF12911 N-terminal TM domain of oligopeptide transport permease C GT360_14225 PF00528 Binding-protein-dependent transport system inner membrane component GT360_14235 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GT360_14240 PF00005 ABC transporter GT360_14240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GT360_14270 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GT360_14275 PF00580 UvrD/REP helicase N-terminal domain GT360_14275 PF13361 UvrD-like helicase C-terminal domain GT360_14280 PF00440 Bacterial regulatory proteins, tetR family GT360_14285 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GT360_14290 PF00873 AcrB/AcrD/AcrF family GT360_14295 PF04380 Membrane fusogenic activity GT360_14300 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain GT360_14300 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain GT360_14305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_14305 PF03466 LysR substrate binding domain GT360_14310 PF06969 HemN C-terminal domain GT360_14310 PF04055 Radical SAM superfamily GT360_14315 PF10675 Protein of unknown function (DUF2489) GT360_14320 PF04220 Der GTPase activator (YihI) GT360_14330 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GT360_14335 PF01926 50S ribosome-binding GTPase GT360_14340 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GT360_14340 PF00476 DNA polymerase family A GT360_14340 PF01612 3'-5' exonuclease GT360_14340 PF01367 5'-3' exonuclease, C-terminal SAM fold GT360_14350 PF00490 Delta-aminolevulinic acid dehydratase GT360_14355 PF01026 TatD related DNase GT360_14360 PF00902 Sec-independent protein translocase protein (TatC) GT360_14365 PF02416 mttA/Hcf106 family GT360_14375 PF03109 ABC1 family GT360_14380 PF02036 SCP-2 sterol transfer family GT360_14385 PF01209 ubiE/COQ5 methyltransferase family GT360_14390 PF02646 RmuC family GT360_14400 PF03707 Bacterial signalling protein N terminal repeat GT360_14400 PF00990 Diguanylate cyclase, GGDEF domain GT360_14400 PF00563 EAL domain GT360_14410 PF10625 Universal stress protein B (UspB) GT360_14415 PF00210 Ferritin-like domain GT360_14420 PF00582 Universal stress protein family GT360_14430 PF04445 Putative SAM-dependent methyltransferase GT360_14435 PF01037 Lrp/AsnC ligand binding domain GT360_14445 PF07690 Major Facilitator Superfamily GT360_14450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_14450 PF03466 LysR substrate binding domain GT360_14455 PF00557 Metallopeptidase family M24 GT360_14455 PF01321 Creatinase/Prolidase N-terminal domain GT360_14455 PF01321 Creatinase/Prolidase N-terminal domain GT360_14455 PF00557 Metallopeptidase family M24 GT360_14460 PF04055 Radical SAM superfamily GT360_14460 PF06968 Biotin and Thiamin Synthesis associated domain GT360_14465 PF05690 Thiazole biosynthesis protein ThiG GT360_14475 PF00899 ThiF family GT360_14480 PF02581 Thiamine monophosphate synthase GT360_14485 PF13667 ThiC-associated domain GT360_14485 PF01964 Radical SAM ThiC family GT360_14490 PF02537 CrcB-like protein, Camphor Resistance (CrcB) GT360_14495 PF00011 Hsp20/alpha crystallin family GT360_14500 PF01751 Toprim domain GT360_14500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT360_14500 PF18053 DNA gyrase B subunit insert domain GT360_14500 PF00204 DNA gyrase B GT360_14500 PF00986 DNA gyrase B subunit, carboxyl terminus GT360_14505 PF02463 RecF/RecN/SMC N terminal domain GT360_14515 PF00583 Acetyltransferase (GNAT) family GT360_14535 PF00005 ABC transporter GT360_14540 PF00528 Binding-protein-dependent transport system inner membrane component GT360_14545 PF00497 Bacterial extracellular solute-binding proteins, family 3 GT360_14550 PF00528 Binding-protein-dependent transport system inner membrane component GT360_14565 PF07690 Major Facilitator Superfamily GT360_14575 PF00376 MerR family regulatory protein GT360_14575 PF09278 MerR, DNA binding GT360_14580 PF02810 SEC-C motif GT360_14585 PF00563 EAL domain GT360_14585 PF08668 HDOD domain GT360_14595 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GT360_14600 PF01406 tRNA synthetases class I (C) catalytic domain GT360_14600 PF09190 DALR domain GT360_14605 PF00265 Thymidine kinase GT360_14610 PF01176 Translation initiation factor 1A / IF-1 GT360_14615 PF04376 Arginine-tRNA-protein transferase, N terminus GT360_14615 PF04377 Arginine-tRNA-protein transferase, C terminus GT360_14625 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GT360_14630 PF10692 Protein of unknown function (DUF2498) GT360_14635 PF01396 Topoisomerase DNA binding C4 zinc finger GT360_14635 PF01751 Toprim domain GT360_14635 PF01131 DNA topoisomerase GT360_14635 PF08272 Topoisomerase I zinc-ribbon-like GT360_14645 PF00483 Nucleotidyl transferase GT360_14650 PF08323 Starch synthase catalytic domain GT360_14650 PF00534 Glycosyl transferases group 1 GT360_14655 PF00561 alpha/beta hydrolase fold GT360_14655 PF08386 TAP-like protein GT360_14670 PF04993 TfoX N-terminal domain GT360_14670 PF04994 TfoX C-terminal domain GT360_14675 PF00356 Bacterial regulatory proteins, lacI family GT360_14680 PF02613 Nitrate reductase delta subunit GT360_14685 PF00072 Response regulator receiver domain GT360_14685 PF00486 Transcriptional regulatory protein, C terminal GT360_14690 PF00578 AhpC/TSA family GT360_14690 PF10417 C-terminal domain of 1-Cys peroxiredoxin GT360_14695 PF07992 Pyridine nucleotide-disulphide oxidoreductase GT360_14695 PF13192 Thioredoxin domain GT360_14700 PF00881 Nitroreductase family GT360_14710 PF02355 Protein export membrane protein GT360_14710 PF13721 SecD export protein N-terminal TM region GT360_14710 PF07549 SecD/SecF GG Motif GT360_14715 PF02355 Protein export membrane protein GT360_14715 PF07549 SecD/SecF GG Motif GT360_14720 PF08443 RimK-like ATP-grasp domain GT360_14720 PF18030 RimK PreATP-grasp domain GT360_14730 PF18030 RimK PreATP-grasp domain GT360_14730 PF08443 RimK-like ATP-grasp domain GT360_14740 PF13649 Methyltransferase domain GT360_14745 PF00768 D-alanyl-D-alanine carboxypeptidase GT360_14745 PF07943 Penicillin-binding protein 5, C-terminal domain GT360_14750 PF01904 Protein of unknown function DUF72 GT360_14755 PF00152 tRNA synthetases class II (D, K and N) GT360_14755 PF01336 OB-fold nucleic acid binding domain GT360_14755 PF02938 GAD domain GT360_14760 PF02146 Sir2 family GT360_14775 PF03466 LysR substrate binding domain GT360_14775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_14780 PF00356 Bacterial regulatory proteins, lacI family GT360_14785 PF00005 ABC transporter GT360_14785 PF17912 MalK OB fold domain GT360_14790 PF14310 Fibronectin type III-like domain GT360_14790 PF00933 Glycosyl hydrolase family 3 N terminal domain GT360_14790 PF01915 Glycosyl hydrolase family 3 C-terminal domain GT360_14795 PF03616 Sodium/glutamate symporter GT360_14805 PF02311 AraC-like ligand binding domain GT360_14805 PF12833 Helix-turn-helix domain GT360_14810 PF03426 Carbohydrate binding domain (family 15) GT360_14810 PF00331 Glycosyl hydrolase family 10 GT360_14815 PF02264 LamB porin GT360_14820 PF17912 MalK OB fold domain GT360_14820 PF00005 ABC transporter GT360_14830 PF00528 Binding-protein-dependent transport system inner membrane component GT360_14835 PF00528 Binding-protein-dependent transport system inner membrane component GT360_14840 PF00331 Glycosyl hydrolase family 10 GT360_14840 PF00756 Putative esterase GT360_14840 PF00404 Dockerin type I domain GT360_14840 PF03422 Carbohydrate binding module (family 6) GT360_14845 PF00672 HAMP domain GT360_14845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT360_14845 PF12729 Four helix bundle sensory module for signal transduction GT360_14850 PF04013 Putative SAM-dependent RNA methyltransferase GT360_14855 PF00356 Bacterial regulatory proteins, lacI family GT360_14860 PF16874 Glycosyl hydrolase family 36 C-terminal domain GT360_14860 PF16875 Glycosyl hydrolase family 36 N-terminal domain GT360_14865 PF00474 Sodium:solute symporter family GT360_14870 PF14525 AraC-binding-like domain GT360_14870 PF12833 Helix-turn-helix domain GT360_14875 PF00155 Aminotransferase class I and II GT360_14885 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain GT360_14885 PF02951 Prokaryotic glutathione synthetase, N-terminal domain GT360_14890 PF04219 Protein of unknown function, DUF GT360_14900 PF04616 Glycosyl hydrolases family 43 GT360_14905 PF04616 Glycosyl hydrolases family 43 GT360_14905 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain GT360_14920 PF12833 Helix-turn-helix domain GT360_14925 PF14310 Fibronectin type III-like domain GT360_14925 PF00933 Glycosyl hydrolase family 3 N terminal domain GT360_14925 PF01915 Glycosyl hydrolase family 3 C-terminal domain GT360_14945 PF07690 Major Facilitator Superfamily GT360_14950 PF01047 MarR family GT360_14965 PF00132 Bacterial transferase hexapeptide (six repeats) GT360_14970 PF00474 Sodium:solute symporter family GT360_14975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_14975 PF03466 LysR substrate binding domain GT360_14985 PF13407 Periplasmic binding protein domain GT360_14990 PF00005 ABC transporter GT360_14995 PF02653 Branched-chain amino acid transport system / permease component GT360_15000 PF12833 Helix-turn-helix domain GT360_15005 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GT360_15005 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GT360_15015 PF13533 Biotin-lipoyl like GT360_15040 PF00106 short chain dehydrogenase GT360_15045 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain GT360_15045 PF04616 Glycosyl hydrolases family 43 GT360_15060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT360_15060 PF00672 HAMP domain GT360_15070 PF01554 MatE GT360_15075 PF00924 Mechanosensitive ion channel GT360_15075 PF12794 Mechanosensitive ion channel inner membrane domain 1 GT360_15075 PF12795 Mechanosensitive ion channel porin domain GT360_15080 PF17200 Single Cache domain 2 GT360_15080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT360_15080 PF00672 HAMP domain GT360_15085 PF05426 Alginate lyase GT360_15085 PF07940 Heparinase II/III-like protein GT360_15090 PF05426 Alginate lyase GT360_15090 PF07940 Heparinase II/III-like protein GT360_15095 PF07883 Cupin domain GT360_15100 PF00294 pfkB family carbohydrate kinase GT360_15105 PF01081 KDPG and KHG aldolase GT360_15115 PF04170 NlpE N-terminal domain GT360_15125 PF04191 Phospholipid methyltransferase GT360_15135 PF02156 Glycosyl hydrolase family 26 GT360_15135 PF00404 Dockerin type I domain GT360_15135 PF00150 Cellulase (glycosyl hydrolase family 5) GT360_15135 PF03425 Carbohydrate binding domain (family 11) GT360_15145 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) GT360_15150 PF00583 Acetyltransferase (GNAT) family GT360_15195 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GT360_15195 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain GT360_15200 PF00106 short chain dehydrogenase GT360_15205 PF03466 LysR substrate binding domain GT360_15205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_15210 PF00005 ABC transporter GT360_15210 PF00664 ABC transporter transmembrane region GT360_15215 PF00664 ABC transporter transmembrane region GT360_15215 PF00005 ABC transporter GT360_15225 PF00583 Acetyltransferase (GNAT) family GT360_15235 PF01914 MarC family integral membrane protein GT360_15245 PF04794 YdjC-like protein GT360_15250 PF02056 Family 4 glycosyl hydrolase GT360_15250 PF11975 Family 4 glycosyl hydrolase C-terminal domain GT360_15255 PF03466 LysR substrate binding domain GT360_15255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_15260 PF02698 DUF218 domain GT360_15265 PF13847 Methyltransferase domain GT360_15270 PF17192 MukF middle domain GT360_15270 PF17193 MukF C-terminal domain GT360_15270 PF03882 MukF winged-helix domain GT360_15275 PF04288 MukE-like family GT360_15280 PF04310 MukB N-terminal GT360_15280 PF16330 MukB hinge domain GT360_15300 PF00857 Isochorismatase family GT360_15315 PF03358 NADPH-dependent FMN reductase GT360_15360 PF00561 alpha/beta hydrolase fold GT360_15380 PF00005 ABC transporter GT360_15410 PF03222 Tryptophan/tyrosine permease family GT360_15425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_15425 PF03466 LysR substrate binding domain GT360_15430 PF01370 NAD dependent epimerase/dehydratase family GT360_15440 PF01979 Amidohydrolase family GT360_15470 PF01638 HxlR-like helix-turn-helix GT360_15475 PF00270 DEAD/DEAH box helicase GT360_15475 PF00271 Helicase conserved C-terminal domain GT360_15490 PF00391 PEP-utilising enzyme, mobile domain GT360_15490 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GT360_15490 PF02896 PEP-utilising enzyme, TIM barrel domain GT360_15510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_15510 PF03466 LysR substrate binding domain GT360_15520 PF03824 High-affinity nickel-transport protein GT360_15530 PF14031 Putative serine dehydratase domain GT360_15530 PF01168 Alanine racemase, N-terminal domain GT360_15545 PF00107 Zinc-binding dehydrogenase GT360_15545 PF08240 Alcohol dehydrogenase GroES-like domain GT360_15565 PF00005 ABC transporter GT360_15565 PF08402 TOBE domain GT360_15580 PF02785 Biotin carboxylase C-terminal domain GT360_15580 PF00289 Biotin carboxylase, N-terminal domain GT360_15580 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GT360_15585 PF01425 Amidase GT360_15595 PF00873 AcrB/AcrD/AcrF family GT360_15605 PF00717 Peptidase S24-like GT360_15610 PF11798 IMS family HHH motif GT360_15610 PF00817 impB/mucB/samB family GT360_15610 PF11799 impB/mucB/samB family C-terminal domain GT360_15610 PF13438 Domain of unknown function (DUF4113) GT360_15615 PF00313 'Cold-shock' DNA-binding domain GT360_15625 PF02028 BCCT, betaine/carnitine/choline family transporter GT360_15630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_15630 PF03466 LysR substrate binding domain GT360_15640 PF00106 short chain dehydrogenase GT360_15650 PF03466 LysR substrate binding domain GT360_15650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_15655 PF16197 Ketoacyl-synthetase C-terminal extension GT360_15655 PF00109 Beta-ketoacyl synthase, N-terminal domain GT360_15655 PF02801 Beta-ketoacyl synthase, C-terminal domain GT360_15655 PF08659 KR domain GT360_15655 PF00550 Phosphopantetheine attachment site GT360_15655 PF00698 Acyl transferase domain GT360_15655 PF14765 Polyketide synthase dehydratase GT360_15655 PF08240 Alcohol dehydrogenase GroES-like domain GT360_15660 PF01734 Patatin-like phospholipase GT360_15665 PF13091 PLD-like domain GT360_15680 PF13411 MerR HTH family regulatory protein GT360_15715 PF13419 Haloacid dehalogenase-like hydrolase GT360_15720 PF02899 Phage integrase, N-terminal SAM-like domain GT360_15720 PF00589 Phage integrase family GT360_15735 PF01270 Glycosyl hydrolases family 8 GT360_15740 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GT360_15760 PF03372 Endonuclease/Exonuclease/phosphatase family GT360_15765 PF02378 Phosphotransferase system, EIIC GT360_15765 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GT360_15765 PF00367 phosphotransferase system, EIIB GT360_15820 PF09313 Domain of unknown function (DUF1971) GT360_15820 PF03848 Tellurite resistance protein TehB GT360_15835 PF18027 Cytosolic carboxypeptidase N-terminal domain GT360_15835 PF00246 Zinc carboxypeptidase GT360_15850 PF00990 Diguanylate cyclase, GGDEF domain GT360_15860 PF00857 Isochorismatase family GT360_15865 PF12833 Helix-turn-helix domain GT360_15865 PF02311 AraC-like ligand binding domain GT360_15895 PF00293 NUDIX domain GT360_15900 PF01227 GTP cyclohydrolase I GT360_15900 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GT360_15905 PF02152 Dihydroneopterin aldolase GT360_15910 PF01227 GTP cyclohydrolase I GT360_15945 PF01329 Pterin 4 alpha carbinolamine dehydratase GT360_15950 PF08787 Alginate lyase GT360_15960 PF00356 Bacterial regulatory proteins, lacI family GT360_15965 PF00128 Alpha amylase, catalytic domain GT360_15965 PF11896 Domain of unknown function (DUF3416) GT360_15970 PF01547 Bacterial extracellular solute-binding protein GT360_15975 PF00248 Aldo/keto reductase family GT360_15990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_15990 PF03466 LysR substrate binding domain GT360_16000 PF08787 Alginate lyase GT360_16005 PF05736 OprF membrane domain GT360_16005 PF00691 OmpA family GT360_16010 PF01645 Conserved region in glutamate synthase GT360_16010 PF13187 4Fe-4S dicluster domain GT360_16015 PF02028 BCCT, betaine/carnitine/choline family transporter GT360_16030 PF00072 Response regulator receiver domain GT360_16030 PF01627 Hpt domain GT360_16030 PF00512 His Kinase A (phospho-acceptor) domain GT360_16030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT360_16030 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GT360_16030 PF00672 HAMP domain GT360_16035 PF13186 Iron-sulfur cluster-binding domain GT360_16035 PF04055 Radical SAM superfamily GT360_16040 PF00884 Sulfatase GT360_16045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_16045 PF03466 LysR substrate binding domain GT360_16090 PF00106 short chain dehydrogenase GT360_16105 PF01594 AI-2E family transporter GT360_16125 PF12706 Beta-lactamase superfamily domain GT360_16135 PF00072 Response regulator receiver domain GT360_16135 PF01627 Hpt domain GT360_16135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT360_16135 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GT360_16135 PF00672 HAMP domain GT360_16135 PF00512 His Kinase A (phospho-acceptor) domain GT360_16150 PF00082 Subtilase family GT360_16165 PF01263 Aldose 1-epimerase GT360_16175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_16175 PF03466 LysR substrate binding domain GT360_16180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT360_16180 PF00672 HAMP domain GT360_16185 PF16363 GDP-mannose 4,6 dehydratase GT360_16190 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain GT360_16190 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain GT360_16195 PF10509 Galactokinase galactose-binding signature GT360_16195 PF00288 GHMP kinases N terminal domain GT360_16195 PF08544 GHMP kinases C terminal GT360_16205 PF09905 DNA-binding protein VF530 GT360_16210 PF12849 PBP superfamily domain GT360_16220 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GT360_16235 PF13673 Acetyltransferase (GNAT) domain GT360_16240 PF03150 Di-haem cytochrome c peroxidase GT360_16240 PF14376 Haem-binding domain GT360_16240 PF00034 Cytochrome c GT360_16245 PF00072 Response regulator receiver domain GT360_16245 PF00512 His Kinase A (phospho-acceptor) domain GT360_16245 PF09308 LuxQ, periplasmic GT360_16245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT360_16250 PF00072 Response regulator receiver domain GT360_16250 PF09308 LuxQ, periplasmic GT360_16250 PF00512 His Kinase A (phospho-acceptor) domain GT360_16250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT360_16275 PF03466 LysR substrate binding domain GT360_16275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_16280 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family GT360_16300 PF06224 Winged helix DNA-binding domain GT360_16305 PF09308 LuxQ, periplasmic GT360_16305 PF00072 Response regulator receiver domain GT360_16305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT360_16305 PF00512 His Kinase A (phospho-acceptor) domain GT360_16310 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GT360_16325 PF01263 Aldose 1-epimerase GT360_16335 PF00698 Acyl transferase domain GT360_16335 PF00550 Phosphopantetheine attachment site GT360_16335 PF08240 Alcohol dehydrogenase GroES-like domain GT360_16335 PF00109 Beta-ketoacyl synthase, N-terminal domain GT360_16335 PF14765 Polyketide synthase dehydratase GT360_16335 PF16197 Ketoacyl-synthetase C-terminal extension GT360_16335 PF08659 KR domain GT360_16335 PF00107 Zinc-binding dehydrogenase GT360_16335 PF02801 Beta-ketoacyl synthase, C-terminal domain GT360_16350 PF07992 Pyridine nucleotide-disulphide oxidoreductase GT360_16350 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GT360_16365 PF01235 Sodium:alanine symporter family GT360_16375 PF03313 Serine dehydratase alpha chain GT360_16375 PF03315 Serine dehydratase beta chain GT360_16380 PF00474 Sodium:solute symporter family GT360_16395 PF13609 Gram-negative porin GT360_16400 PF00356 Bacterial regulatory proteins, lacI family GT360_16405 PF13654 AAA domain GT360_16405 PF05362 Lon protease (S16) C-terminal proteolytic domain GT360_16420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT360_16420 PF08447 PAS fold GT360_16420 PF13426 PAS domain GT360_16425 PF01226 Formate/nitrite transporter GT360_16430 PF00106 short chain dehydrogenase GT360_16440 PF00155 Aminotransferase class I and II GT360_16440 PF00392 Bacterial regulatory proteins, gntR family GT360_16445 PF00202 Aminotransferase class-III GT360_16450 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GT360_16455 PF00005 ABC transporter GT360_16460 PF00528 Binding-protein-dependent transport system inner membrane component GT360_16480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT360_16480 PF00672 HAMP domain GT360_16480 PF02743 Cache domain GT360_16495 PF00563 EAL domain GT360_16495 PF00990 Diguanylate cyclase, GGDEF domain GT360_16495 PF01590 GAF domain GT360_16495 PF00360 Phytochrome region GT360_16520 PF03601 Conserved hypothetical protein 698 GT360_16525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_16525 PF03466 LysR substrate binding domain GT360_16535 PF14602 Hexapeptide repeat of succinyl-transferase GT360_16535 PF12464 Maltose acetyltransferase GT360_16550 PF03109 ABC1 family GT360_16565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT360_16565 PF00672 HAMP domain GT360_16565 PF01627 Hpt domain GT360_16565 PF00072 Response regulator receiver domain GT360_16565 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GT360_16565 PF00512 His Kinase A (phospho-acceptor) domain GT360_16570 PF00140 Sigma-70 factor, region 1.2 GT360_16570 PF04542 Sigma-70 region 2 GT360_16570 PF04545 Sigma-70, region 4 GT360_16570 PF04539 Sigma-70 region 3 GT360_16580 PF00664 ABC transporter transmembrane region GT360_16580 PF00005 ABC transporter GT360_16585 PF03412 Peptidase C39 family GT360_16585 PF00005 ABC transporter GT360_16585 PF00664 ABC transporter transmembrane region GT360_16595 PF00072 Response regulator receiver domain GT360_16595 PF00486 Transcriptional regulatory protein, C terminal GT360_16600 PF13533 Biotin-lipoyl like GT360_16615 PF02927 Cellulase N-terminal ig-like domain GT360_16615 PF00404 Dockerin type I domain GT360_16615 PF00759 Glycosyl hydrolase family 9 GT360_16615 PF02018 Carbohydrate binding domain GT360_16630 PF12792 CSS motif domain associated with EAL GT360_16630 PF00563 EAL domain GT360_16640 PF13533 Biotin-lipoyl like GT360_16645 PF00873 AcrB/AcrD/AcrF family GT360_16650 PF00881 Nitroreductase family GT360_16655 PF00141 Peroxidase GT360_16660 PF07690 Major Facilitator Superfamily GT360_16665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_16665 PF03466 LysR substrate binding domain GT360_16670 PF13533 Biotin-lipoyl like GT360_16685 PF00384 Molybdopterin oxidoreductase GT360_16685 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GT360_16685 PF01568 Molydopterin dinucleotide binding domain GT360_16690 PF12800 4Fe-4S binding domain GT360_16690 PF13247 4Fe-4S dicluster domain GT360_16695 PF04976 DMSO reductase anchor subunit (DmsC) GT360_16700 PF02613 Nitrate reductase delta subunit GT360_16705 PF12838 4Fe-4S dicluster domain GT360_16705 PF00037 4Fe-4S binding domain GT360_16720 PF00563 EAL domain GT360_16720 PF03707 Bacterial signalling protein N terminal repeat GT360_16720 PF00990 Diguanylate cyclase, GGDEF domain GT360_16730 PF01212 Beta-eliminating lyase GT360_16740 PF00990 Diguanylate cyclase, GGDEF domain GT360_16745 PF03441 FAD binding domain of DNA photolyase GT360_16745 PF00875 DNA photolyase GT360_16750 PF04244 Deoxyribodipyrimidine photo-lyase-related protein GT360_16760 PF00072 Response regulator receiver domain GT360_16760 PF01584 CheW-like domain GT360_16770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT360_16770 PF12729 Four helix bundle sensory module for signal transduction GT360_16770 PF00672 HAMP domain GT360_16785 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GT360_16790 PF00528 Binding-protein-dependent transport system inner membrane component GT360_16795 PF00528 Binding-protein-dependent transport system inner membrane component GT360_16795 PF12911 N-terminal TM domain of oligopeptide transport permease C GT360_16800 PF00005 ABC transporter GT360_16800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GT360_16810 PF13411 MerR HTH family regulatory protein GT360_16815 PF00871 Acetokinase family GT360_16820 PF04225 Opacity-associated protein A LysM-like domain GT360_16820 PF01551 Peptidase family M23 GT360_16830 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GT360_16835 PF00939 Sodium:sulfate symporter transmembrane region GT360_16840 PF07690 Major Facilitator Superfamily GT360_16845 PF01554 MatE GT360_16855 PF00884 Sulfatase GT360_16870 PF17863 AAA lid domain GT360_16870 PF07726 ATPase family associated with various cellular activities (AAA) GT360_16890 PF13519 von Willebrand factor type A domain GT360_16890 PF07584 Aerotolerance regulator N-terminal GT360_16900 PF02780 Transketolase, C-terminal domain GT360_16900 PF02779 Transketolase, pyrimidine binding domain GT360_16900 PF00456 Transketolase, thiamine diphosphate binding domain GT360_16905 PF00923 Transaldolase/Fructose-6-phosphate aldolase GT360_16910 PF04198 Putative sugar-binding domain GT360_16915 PF00581 Rhodanese-like domain GT360_16925 PF00899 ThiF family GT360_16930 PF03454 MoeA C-terminal region (domain IV) GT360_16930 PF00994 Probable molybdopterin binding domain GT360_16930 PF03453 MoeA N-terminal region (domain I and II) GT360_16935 PF01227 GTP cyclohydrolase I GT360_16940 PF00270 DEAD/DEAH box helicase GT360_16940 PF00271 Helicase conserved C-terminal domain GT360_16940 PF03880 DbpA RNA binding domain GT360_16950 PF00037 4Fe-4S binding domain GT360_16950 PF11953 Domain of unknown function (DUF3470) GT360_16955 PF00588 SpoU rRNA Methylase family GT360_16955 PF08032 RNA 2'-O ribose methyltransferase substrate binding GT360_16960 PF01641 SelR domain GT360_16960 PF01625 Peptide methionine sulfoxide reductase GT360_16970 PF00465 Iron-containing alcohol dehydrogenase GT360_16975 PF00483 Nucleotidyl transferase GT360_16985 PF03466 LysR substrate binding domain GT360_16985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_16995 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GT360_16995 PF07685 CobB/CobQ-like glutamine amidotransferase domain GT360_17000 PF00528 Binding-protein-dependent transport system inner membrane component GT360_17005 PF00005 ABC transporter GT360_17005 PF03459 TOBE domain GT360_17015 PF00486 Transcriptional regulatory protein, C terminal GT360_17015 PF00072 Response regulator receiver domain GT360_17020 PF00990 Diguanylate cyclase, GGDEF domain GT360_17035 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch GT360_17035 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GT360_17035 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GT360_17040 PF02233 NAD(P) transhydrogenase beta subunit GT360_17050 PF06406 StbA protein GT360_17060 PF00486 Transcriptional regulatory protein, C terminal GT360_17060 PF00072 Response regulator receiver domain GT360_17075 PF03701 Uncharacterised protein family (UPF0181) GT360_17095 PF01253 Translation initiation factor SUI1 GT360_17105 PF07478 D-ala D-ala ligase C-terminus GT360_17105 PF01820 D-ala D-ala ligase N-terminus GT360_17115 PF00583 Acetyltransferase (GNAT) family GT360_17115 PF13380 CoA binding domain GT360_17115 PF13607 Succinyl-CoA ligase like flavodoxin domain GT360_17120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_17120 PF03466 LysR substrate binding domain GT360_17125 PF12793 Sugar transport-related sRNA regulator N-term GT360_17125 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GT360_17130 PF03061 Thioesterase superfamily GT360_17150 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GT360_17150 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GT360_17155 PF00085 Thioredoxin GT360_17185 PF05762 VWA domain containing CoxE-like protein GT360_17190 PF07728 AAA domain (dynein-related subfamily) GT360_17190 PF17868 AAA lid domain GT360_17190 PF12592 Protein of unknown function (DUF3763) GT360_17195 PF00293 NUDIX domain GT360_17205 PF00563 EAL domain GT360_17205 PF00990 Diguanylate cyclase, GGDEF domain GT360_17205 PF03707 Bacterial signalling protein N terminal repeat GT360_17210 PF01389 OmpA-like transmembrane domain GT360_17210 PF00691 OmpA family GT360_17220 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GT360_17220 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GT360_17225 PF13419 Haloacid dehalogenase-like hydrolase GT360_17235 PF16363 GDP-mannose 4,6 dehydratase GT360_17240 PF03746 LamB/YcsF family GT360_17245 PF02682 Carboxyltransferase domain, subdomain C and D GT360_17250 PF02626 Carboxyltransferase domain, subdomain A and B GT360_17265 PF00005 ABC transporter GT360_17270 PF13472 GDSL-like Lipase/Acylhydrolase family GT360_17275 PF07055 Enoyl reductase FAD binding domain GT360_17275 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase GT360_17275 PF12241 Trans-2-enoyl-CoA reductase catalytic region GT360_17280 PF00563 EAL domain GT360_17280 PF00990 Diguanylate cyclase, GGDEF domain GT360_17280 PF13188 PAS domain GT360_17280 PF03707 Bacterial signalling protein N terminal repeat GT360_17290 PF00226 DnaJ domain GT360_17290 PF01556 DnaJ C terminal domain GT360_17290 PF00684 DnaJ central domain GT360_17295 PF03091 CutA1 divalent ion tolerance protein GT360_17310 PF00294 pfkB family carbohydrate kinase GT360_17340 PF03473 MOSC domain GT360_17340 PF03476 MOSC N-terminal beta barrel domain GT360_17340 PF00111 2Fe-2S iron-sulfur cluster binding domain GT360_17345 PF01679 Proteolipid membrane potential modulator GT360_17365 PF16901 C-terminal domain of alpha-glycerophosphate oxidase GT360_17365 PF01266 FAD dependent oxidoreductase GT360_17370 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GT360_17370 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GT360_17380 PF02913 FAD linked oxidases, C-terminal domain GT360_17380 PF01565 FAD binding domain GT360_17385 PF13183 4Fe-4S dicluster domain GT360_17385 PF02754 Cysteine-rich domain GT360_17395 PF17863 AAA lid domain GT360_17395 PF07726 ATPase family associated with various cellular activities (AAA) GT360_17400 PF01882 Protein of unknown function DUF58 GT360_17415 PF07584 Aerotolerance regulator N-terminal GT360_17415 PF00092 von Willebrand factor type A domain GT360_17435 PF01791 DeoC/LacD family aldolase GT360_17440 PF02734 DAK2 domain GT360_17445 PF02733 Dak1 domain GT360_17460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_17460 PF03466 LysR substrate binding domain GT360_17465 PF00497 Bacterial extracellular solute-binding proteins, family 3 GT360_17470 PF00528 Binding-protein-dependent transport system inner membrane component GT360_17475 PF00005 ABC transporter GT360_17480 PF00356 Bacterial regulatory proteins, lacI family GT360_17490 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GT360_17490 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GT360_17495 PF00005 ABC transporter GT360_17500 PF02653 Branched-chain amino acid transport system / permease component GT360_17505 PF13407 Periplasmic binding protein domain GT360_17530 PF02472 Biopolymer transport protein ExbD/TolR GT360_17535 PF01618 MotA/TolQ/ExbB proton channel family GT360_17540 PF01618 MotA/TolQ/ExbB proton channel family GT360_17550 PF00072 Response regulator receiver domain GT360_17555 PF13186 Iron-sulfur cluster-binding domain GT360_17555 PF04055 Radical SAM superfamily GT360_17560 PF13488 Glycine zipper GT360_17560 PF00691 OmpA family GT360_17570 PF01554 MatE GT360_17575 PF01627 Hpt domain GT360_17575 PF00512 His Kinase A (phospho-acceptor) domain GT360_17575 PF00672 HAMP domain GT360_17575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT360_17575 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GT360_17575 PF00072 Response regulator receiver domain GT360_17595 PF01638 HxlR-like helix-turn-helix GT360_17600 PF07715 TonB-dependent Receptor Plug Domain GT360_17600 PF00593 TonB dependent receptor GT360_17610 PF01032 FecCD transport family GT360_17615 PF01032 FecCD transport family GT360_17620 PF00005 ABC transporter GT360_17645 PF02253 Phospholipase A1 GT360_17660 PF01641 SelR domain GT360_17660 PF01625 Peptide methionine sulfoxide reductase GT360_17665 PF02632 BioY family GT360_17670 PF02361 Cobalt transport protein GT360_17675 PF00005 ABC transporter GT360_17680 PF07690 Major Facilitator Superfamily GT360_17690 PF04298 Putative neutral zinc metallopeptidase GT360_17815 PF13361 UvrD-like helicase C-terminal domain GT360_17815 PF00580 UvrD/REP helicase N-terminal domain GT360_17815 PF12705 PD-(D/E)XK nuclease superfamily GT360_17825 PF10502 Signal peptidase, peptidase S26 GT360_17840 PF13533 Biotin-lipoyl like GT360_17905 PF02614 Glucuronate isomerase GT360_17910 PF00474 Sodium:solute symporter family GT360_17925 PF10688 Bacterial inner membrane protein GT360_17935 PF01614 Bacterial transcriptional regulator GT360_17935 PF09339 IclR helix-turn-helix domain GT360_17950 PF00474 Sodium:solute symporter family GT360_17960 PF06178 Oligogalacturonate-specific porin protein (KdgM) GT360_17965 PF00294 pfkB family carbohydrate kinase GT360_17970 PF01081 KDPG and KHG aldolase GT360_17985 PF13237 4Fe-4S dicluster domain GT360_17985 PF10531 SLBB domain GT360_17985 PF13375 RnfC Barrel sandwich hybrid domain GT360_17985 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit GT360_17990 PF00465 Iron-containing alcohol dehydrogenase GT360_17995 PF00871 Acetokinase family GT360_18000 PF00936 BMC domain GT360_18005 PF00465 Iron-containing alcohol dehydrogenase GT360_18010 PF00171 Aldehyde dehydrogenase family GT360_18025 PF06130 Phosphate propanoyltransferase GT360_18030 PF00936 BMC domain GT360_18035 PF00230 Major intrinsic protein GT360_18040 PF04055 Radical SAM superfamily GT360_18045 PF02901 Pyruvate formate lyase-like GT360_18045 PF01228 Glycine radical GT360_18050 PF00936 BMC domain GT360_18055 PF00936 BMC domain GT360_18060 PF12833 Helix-turn-helix domain GT360_18060 PF10114 Sensory domain found in PocR GT360_18090 PF00356 Bacterial regulatory proteins, lacI family GT360_18095 PF00884 Sulfatase GT360_18105 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain GT360_18105 PF04616 Glycosyl hydrolases family 43 GT360_18110 PF00474 Sodium:solute symporter family GT360_18115 PF07470 Glycosyl Hydrolase Family 88 GT360_18130 PF00465 Iron-containing alcohol dehydrogenase GT360_18145 PF02656 Domain of unknown function (DUF202) GT360_18155 PF13186 Iron-sulfur cluster-binding domain GT360_18155 PF04055 Radical SAM superfamily GT360_18165 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain GT360_18165 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain GT360_18165 PF16347 Domain of unknown function (DUF4976) GT360_18165 PF00884 Sulfatase GT360_18165 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain GT360_18170 PF05336 L-rhamnose mutarotase GT360_18175 PF00596 Class II Aldolase and Adducin N-terminal domain GT360_18180 PF06134 L-rhamnose isomerase (RhaA) GT360_18185 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GT360_18185 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GT360_18190 PF00474 Sodium:solute symporter family GT360_18195 PF02311 AraC-like ligand binding domain GT360_18195 PF12833 Helix-turn-helix domain GT360_18200 PF07470 Glycosyl Hydrolase Family 88 GT360_18225 PF00884 Sulfatase GT360_18235 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain GT360_18235 PF04616 Glycosyl hydrolases family 43 GT360_18240 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain GT360_18240 PF08531 Alpha-L-rhamnosidase N-terminal domain GT360_18240 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain GT360_18240 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain GT360_18245 PF00474 Sodium:solute symporter family GT360_18250 PF00884 Sulfatase GT360_18255 PF07470 Glycosyl Hydrolase Family 88 GT360_18285 PF00356 Bacterial regulatory proteins, lacI family GT360_18290 PF00474 Sodium:solute symporter family GT360_18300 PF06178 Oligogalacturonate-specific porin protein (KdgM) GT360_18320 PF12167 Arm DNA-binding domain GT360_18320 PF00589 Phage integrase family GT360_18340 PF08240 Alcohol dehydrogenase GroES-like domain GT360_18340 PF00107 Zinc-binding dehydrogenase GT360_18345 PF01116 Fructose-bisphosphate aldolase class-II GT360_18355 PF00294 pfkB family carbohydrate kinase GT360_18365 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GT360_18370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT360_18370 PF12729 Four helix bundle sensory module for signal transduction GT360_18370 PF00672 HAMP domain GT360_18385 PF00912 Transglycosylase GT360_18385 PF14814 Bifunctional transglycosylase second domain GT360_18385 PF00905 Penicillin binding protein transpeptidase domain GT360_18390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GT360_18395 PF00873 AcrB/AcrD/AcrF family GT360_18405 PF03974 Ecotin GT360_18410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_18410 PF03466 LysR substrate binding domain GT360_18425 PF03466 LysR substrate binding domain GT360_18425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_18440 PF00117 Glutamine amidotransferase class-I GT360_18440 PF00958 GMP synthase C terminal domain GT360_18450 PF00356 Bacterial regulatory proteins, lacI family GT360_18455 PF00753 Metallo-beta-lactamase superfamily GT360_18455 PF12706 Beta-lactamase superfamily domain GT360_18460 PF17912 MalK OB fold domain GT360_18460 PF00005 ABC transporter GT360_18465 PF00528 Binding-protein-dependent transport system inner membrane component GT360_18470 PF00528 Binding-protein-dependent transport system inner membrane component GT360_18480 PF01266 FAD dependent oxidoreductase GT360_18480 PF16901 C-terminal domain of alpha-glycerophosphate oxidase GT360_18485 PF00149 Calcineurin-like phosphoesterase GT360_18490 PF08402 TOBE domain GT360_18490 PF00005 ABC transporter GT360_18495 PF00528 Binding-protein-dependent transport system inner membrane component GT360_18500 PF00528 Binding-protein-dependent transport system inner membrane component GT360_18505 PF01547 Bacterial extracellular solute-binding protein GT360_18510 PF00356 Bacterial regulatory proteins, lacI family GT360_18515 PF13416 Bacterial extracellular solute-binding protein GT360_18520 PF00528 Binding-protein-dependent transport system inner membrane component GT360_18525 PF00528 Binding-protein-dependent transport system inner membrane component GT360_18530 PF00005 ABC transporter GT360_18530 PF17912 MalK OB fold domain GT360_18535 PF08220 DeoR-like helix-turn-helix domain GT360_18535 PF00455 DeoR C terminal sensor domain GT360_18540 PF03009 Glycerophosphoryl diester phosphodiesterase family GT360_18555 PF00892 EamA-like transporter family GT360_18580 PF07883 Cupin domain GT360_18580 PF01381 Helix-turn-helix GT360_18585 PF03594 Benzoate membrane transport protein GT360_18590 PF01758 Sodium Bile acid symporter family GT360_18600 PF04336 Acyl carrier protein phosphodiesterase GT360_18615 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain GT360_18615 PF00056 lactate/malate dehydrogenase, NAD binding domain GT360_18635 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GT360_18635 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GT360_18650 PF01116 Fructose-bisphosphate aldolase class-II GT360_18660 PF00294 pfkB family carbohydrate kinase GT360_18665 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GT360_18665 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GT360_18670 PF00205 Thiamine pyrophosphate enzyme, central domain GT360_18670 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GT360_18670 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GT360_18675 PF01261 Xylose isomerase-like TIM barrel GT360_18680 PF00083 Sugar (and other) transporter GT360_18685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_18685 PF03466 LysR substrate binding domain GT360_18700 PF02803 Thiolase, C-terminal domain GT360_18700 PF00108 Thiolase, N-terminal domain GT360_18705 PF01144 Coenzyme A transferase GT360_18710 PF01144 Coenzyme A transferase GT360_18720 PF00873 AcrB/AcrD/AcrF family GT360_18725 PF00529 HlyD membrane-fusion protein of T1SS GT360_18725 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GT360_18730 PF02321 Outer membrane efflux protein GT360_18765 PF02874 ATP synthase alpha/beta family, beta-barrel domain GT360_18765 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GT360_18770 PF01813 ATP synthase subunit D GT360_18795 PF16886 ATPsynthase alpha/beta subunit N-term extension GT360_18795 PF02874 ATP synthase alpha/beta family, beta-barrel domain GT360_18795 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GT360_18820 PF00144 Beta-lactamase GT360_18830 PF01979 Amidohydrolase family GT360_18835 PF01979 Amidohydrolase family GT360_18840 PF00144 Beta-lactamase GT360_18845 PF03466 LysR substrate binding domain GT360_18845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_18850 PF07969 Amidohydrolase family GT360_18855 PF03466 LysR substrate binding domain GT360_18855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_18870 PF06610 L-alanine exporter GT360_18875 PF09308 LuxQ, periplasmic GT360_18875 PF00512 His Kinase A (phospho-acceptor) domain GT360_18875 PF00072 Response regulator receiver domain GT360_18875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT360_18885 PF02445 Quinolinate synthetase A protein GT360_18890 PF13174 Tetratricopeptide repeat GT360_18890 PF16331 TolA binding protein trimerisation GT360_18895 PF00691 OmpA family GT360_18910 PF02472 Biopolymer transport protein ExbD/TolR GT360_18915 PF01618 MotA/TolQ/ExbB proton channel family GT360_18920 PF03061 Thioesterase superfamily GT360_18930 PF08173 Membrane bound YbgT-like protein GT360_18935 PF02322 Cytochrome bd terminal oxidase subunit II GT360_18940 PF01654 Cytochrome bd terminal oxidase subunit I GT360_18945 PF05491 RuvB C-terminal winged helix domain GT360_18945 PF17864 RuvB AAA lid domain GT360_18945 PF05496 Holliday junction DNA helicase RuvB P-loop domain GT360_18950 PF01330 RuvA N terminal domain GT360_18950 PF07499 RuvA, C-terminal domain GT360_18955 PF02075 Crossover junction endodeoxyribonuclease RuvC GT360_18960 PF02378 Phosphotransferase system, EIIC GT360_18960 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GT360_18965 PF00294 pfkB family carbohydrate kinase GT360_18970 PF00381 PTS HPr component phosphorylation site GT360_18970 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GT360_18975 PF00356 Bacterial regulatory proteins, lacI family GT360_18975 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GT360_18985 PF00593 TonB dependent receptor GT360_18985 PF07715 TonB-dependent Receptor Plug Domain GT360_18990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_18990 PF03466 LysR substrate binding domain GT360_18995 PF01497 Periplasmic binding protein GT360_19000 PF01032 FecCD transport family GT360_19005 PF01032 FecCD transport family GT360_19010 PF00005 ABC transporter GT360_19020 PF02368 Bacterial Ig-like domain (group 2) GT360_19020 PF00722 Glycosyl hydrolases family 16 GT360_19035 PF00083 Sugar (and other) transporter GT360_19040 PF00884 Sulfatase GT360_19040 PF16347 Domain of unknown function (DUF4976) GT360_19045 PF00722 Glycosyl hydrolases family 16 GT360_19045 PF02368 Bacterial Ig-like domain (group 2) GT360_19050 PF02368 Bacterial Ig-like domain (group 2) GT360_19050 PF00722 Glycosyl hydrolases family 16 GT360_19055 PF07944 Beta-L-arabinofuranosidase, GH127 GT360_19060 PF02656 Domain of unknown function (DUF202) GT360_19075 PF00027 Cyclic nucleotide-binding domain GT360_19075 PF00005 ABC transporter GT360_19080 PF13186 Iron-sulfur cluster-binding domain GT360_19080 PF04055 Radical SAM superfamily GT360_19085 PF01614 Bacterial transcriptional regulator GT360_19085 PF09339 IclR helix-turn-helix domain GT360_19095 PF01872 RibD C-terminal domain GT360_19100 PF01081 KDPG and KHG aldolase GT360_19105 PF05035 2-keto-3-deoxy-galactonokinase GT360_19110 PF13378 Enolase C-terminal domain-like GT360_19110 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GT360_19115 PF00171 Aldehyde dehydrogenase family GT360_19140 PF03741 Integral membrane protein TerC family GT360_19145 PF01292 Prokaryotic cytochrome b561 GT360_19160 PF00072 Response regulator receiver domain GT360_19160 PF00486 Transcriptional regulatory protein, C terminal GT360_19165 PF00672 HAMP domain GT360_19165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT360_19165 PF00512 His Kinase A (phospho-acceptor) domain GT360_19170 PF10282 Lactonase, 7-bladed beta-propeller GT360_19180 PF01734 Patatin-like phospholipase GT360_19190 PF18081 Fanconi anemia-associated nuclease SAP domain GT360_19190 PF08774 VRR-NUC domain GT360_19195 PF00781 Diacylglycerol kinase catalytic domain GT360_19205 PF08443 RimK-like ATP-grasp domain GT360_19205 PF18030 RimK PreATP-grasp domain GT360_19210 PF00155 Aminotransferase class I and II GT360_19215 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GT360_19220 PF00873 AcrB/AcrD/AcrF family GT360_19225 PF13533 Biotin-lipoyl like GT360_19240 PF13247 4Fe-4S dicluster domain GT360_19245 PF00384 Molybdopterin oxidoreductase GT360_19245 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GT360_19245 PF01568 Molydopterin dinucleotide binding domain GT360_19275 PF02634 FdhD/NarQ family GT360_19285 PF00012 Hsp70 protein GT360_19300 PF02954 Bacterial regulatory protein, Fis family GT360_19300 PF00072 Response regulator receiver domain GT360_19300 PF00158 Sigma-54 interaction domain GT360_19315 PF00248 Aldo/keto reductase family GT360_19330 PF00916 Sulfate permease family GT360_19330 PF01740 STAS domain GT360_19345 PF00155 Aminotransferase class I and II GT360_19355 PF00072 Response regulator receiver domain GT360_19355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT360_19355 PF00512 His Kinase A (phospho-acceptor) domain GT360_19355 PF08448 PAS fold GT360_19355 PF13426 PAS domain GT360_19360 PF00486 Transcriptional regulatory protein, C terminal GT360_19360 PF00072 Response regulator receiver domain GT360_19380 PF03466 LysR substrate binding domain GT360_19380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_19395 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain GT360_19395 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain GT360_19400 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase GT360_19405 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain GT360_19405 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GT360_19430 PF02254 TrkA-N domain GT360_19430 PF00999 Sodium/hydrogen exchanger family GT360_19435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_19435 PF03466 LysR substrate binding domain GT360_19440 PF08543 Phosphomethylpyrimidine kinase GT360_19445 PF03616 Sodium/glutamate symporter GT360_19455 PF00155 Aminotransferase class I and II GT360_19460 PF06826 Predicted Permease Membrane Region GT360_19460 PF02080 TrkA-C domain GT360_19470 PF13533 Biotin-lipoyl like GT360_19485 PF00135 Carboxylesterase family GT360_19490 PF13091 PLD-like domain GT360_19495 PF13091 PLD-like domain GT360_19500 PF01103 Surface antigen GT360_19500 PF17243 POTRA domain TamA domain 1 GT360_19500 PF07244 Surface antigen variable number repeat GT360_19555 PF13438 Domain of unknown function (DUF4113) GT360_19555 PF11798 IMS family HHH motif GT360_19555 PF11799 impB/mucB/samB family C-terminal domain GT360_19555 PF00817 impB/mucB/samB family GT360_19600 PF00210 Ferritin-like domain GT360_19605 PF04324 BFD-like [2Fe-2S] binding domain GT360_19610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_19610 PF03466 LysR substrate binding domain GT360_19620 PF00005 ABC transporter GT360_19625 PF00528 Binding-protein-dependent transport system inner membrane component GT360_19635 PF07729 FCD domain GT360_19635 PF00392 Bacterial regulatory proteins, gntR family GT360_19640 PF07729 FCD domain GT360_19640 PF00392 Bacterial regulatory proteins, gntR family GT360_19645 PF00571 CBS domain GT360_19650 PF07733 Bacterial DNA polymerase III alpha NTPase domain GT360_19650 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GT360_19650 PF14579 Helix-hairpin-helix motif GT360_19650 PF02811 PHP domain GT360_19650 PF00929 Exonuclease GT360_19655 PF01970 Tripartite tricarboxylate transporter TctA family GT360_19665 PF03401 Tripartite tricarboxylate transporter family receptor GT360_19680 PF08787 Alginate lyase GT360_19685 PF06178 Oligogalacturonate-specific porin protein (KdgM) GT360_19695 PF00474 Sodium:solute symporter family GT360_19705 PF04542 Sigma-70 region 2 GT360_19705 PF08281 Sigma-70, region 4 GT360_19715 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GT360_19715 PF02403 Seryl-tRNA synthetase N-terminal domain GT360_19720 PF00004 ATPase family associated with various cellular activities (AAA) GT360_19720 PF16193 AAA C-terminal domain GT360_19720 PF12002 MgsA AAA+ ATPase C terminal GT360_19725 PF03548 Outer membrane lipoprotein carrier protein LolA GT360_19730 PF02810 SEC-C motif GT360_19730 PF01043 SecA preprotein cross-linking domain GT360_19730 PF07516 SecA Wing and Scaffold domain GT360_19730 PF07517 SecA DEAD-like domain GT360_19735 PF01207 Dihydrouridine synthase (Dus) GT360_19750 PF03466 LysR substrate binding domain GT360_19750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_19760 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) GT360_19765 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GT360_19770 PF18073 Rubredoxin metal binding domain GT360_19775 PF06305 Lipopolysaccharide assembly protein A domain GT360_19785 PF00575 S1 RNA binding domain GT360_19790 PF02224 Cytidylate kinase GT360_19800 PF13145 PPIC-type PPIASE domain GT360_19805 PF00216 Bacterial DNA-binding protein GT360_19810 PF05362 Lon protease (S16) C-terminal proteolytic domain GT360_19810 PF02190 ATP-dependent protease La (LON) substrate-binding domain GT360_19810 PF00004 ATPase family associated with various cellular activities (AAA) GT360_19815 PF10431 C-terminal, D2-small domain, of ClpB protein GT360_19815 PF07724 AAA domain (Cdc48 subfamily) GT360_19815 PF06689 ClpX C4-type zinc finger GT360_19820 PF00574 Clp protease GT360_19825 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GT360_19825 PF05698 Bacterial trigger factor protein (TF) C-terminus GT360_19825 PF05697 Bacterial trigger factor protein (TF) GT360_19840 PF03466 LysR substrate binding domain GT360_19840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_19855 PF03466 LysR substrate binding domain GT360_19855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_19895 PF01256 Carbohydrate kinase GT360_19895 PF03853 YjeF-related protein N-terminus GT360_19905 PF00072 Response regulator receiver domain GT360_19905 PF00486 Transcriptional regulatory protein, C terminal GT360_19915 PF13476 AAA domain GT360_19920 PF12320 Type 5 capsule protein repressor C-terminal domain GT360_19920 PF00149 Calcineurin-like phosphoesterase GT360_19925 PF00149 Calcineurin-like phosphoesterase GT360_19925 PF02872 5'-nucleotidase, C-terminal domain GT360_19930 PF11398 Protein of unknown function (DUF2813) GT360_19935 PF01226 Formate/nitrite transporter GT360_19940 PF04264 YceI-like domain GT360_19945 PF01292 Prokaryotic cytochrome b561 GT360_19955 PF00196 Bacterial regulatory proteins, luxR family GT360_19955 PF00072 Response regulator receiver domain GT360_19960 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term GT360_19960 PF07730 Histidine kinase GT360_19960 PF00672 HAMP domain GT360_19960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT360_19965 PF00037 4Fe-4S binding domain GT360_19965 PF12800 4Fe-4S binding domain GT360_19965 PF13187 4Fe-4S dicluster domain GT360_19975 PF01568 Molydopterin dinucleotide binding domain GT360_19975 PF00384 Molybdopterin oxidoreductase GT360_19975 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GT360_19980 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) GT360_19985 PF03264 NapC/NirT cytochrome c family, N-terminal region GT360_20005 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus GT360_20005 PF00561 alpha/beta hydrolase fold GT360_20015 PF00108 Thiolase, N-terminal domain GT360_20015 PF02803 Thiolase, C-terminal domain GT360_20020 PF00106 short chain dehydrogenase GT360_20025 PF00209 Sodium:neurotransmitter symporter family GT360_20045 PF05552 Conserved TM helix GT360_20045 PF00924 Mechanosensitive ion channel GT360_20055 PF00072 Response regulator receiver domain GT360_20055 PF09308 LuxQ, periplasmic GT360_20055 PF00512 His Kinase A (phospho-acceptor) domain GT360_20055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT360_20075 PF01594 AI-2E family transporter GT360_20085 PF13533 Biotin-lipoyl like GT360_20090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT360_20090 PF00512 His Kinase A (phospho-acceptor) domain GT360_20090 PF00989 PAS fold GT360_20095 PF00072 Response regulator receiver domain GT360_20095 PF00158 Sigma-54 interaction domain GT360_20095 PF02954 Bacterial regulatory protein, Fis family GT360_20100 PF12849 PBP superfamily domain GT360_20105 PF00528 Binding-protein-dependent transport system inner membrane component GT360_20110 PF00005 ABC transporter GT360_20110 PF08402 TOBE domain GT360_20120 PF03454 MoeA C-terminal region (domain IV) GT360_20120 PF03453 MoeA N-terminal region (domain I and II) GT360_20120 PF00994 Probable molybdopterin binding domain GT360_20130 PF00691 OmpA family GT360_20165 PF00437 Type II/IV secretion system protein GT360_20170 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GT360_20180 PF00263 Bacterial type II and III secretion system protein GT360_20180 PF04972 BON domain GT360_20180 PF13629 Pilus formation protein N terminal region GT360_20200 PF00270 DEAD/DEAH box helicase GT360_20200 PF00271 Helicase conserved C-terminal domain GT360_20210 PF00512 His Kinase A (phospho-acceptor) domain GT360_20210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT360_20210 PF01627 Hpt domain GT360_20210 PF00072 Response regulator receiver domain GT360_20210 PF00672 HAMP domain GT360_20215 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GT360_20220 PF02142 MGS-like domain GT360_20225 PF00580 UvrD/REP helicase N-terminal domain GT360_20225 PF12462 DNA helicase IV / RNA helicase N terminal GT360_20225 PF13361 UvrD-like helicase C-terminal domain GT360_20230 PF12805 FUSC-like inner membrane protein yccS GT360_20235 PF00072 Response regulator receiver domain GT360_20235 PF09308 LuxQ, periplasmic GT360_20235 PF00512 His Kinase A (phospho-acceptor) domain GT360_20235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT360_20240 PF13407 Periplasmic binding protein domain GT360_20245 PF01541 GIY-YIG catalytic domain GT360_20265 PF03606 C4-dicarboxylate anaerobic carrier GT360_20280 PF00990 Diguanylate cyclase, GGDEF domain GT360_20280 PF03707 Bacterial signalling protein N terminal repeat GT360_20280 PF13188 PAS domain GT360_20280 PF00563 EAL domain GT360_20285 PF08769 Sporulation initiation factor Spo0A C terminal GT360_20285 PF00072 Response regulator receiver domain GT360_20290 PF00990 Diguanylate cyclase, GGDEF domain GT360_20290 PF05230 MASE2 domain GT360_20300 PF00072 Response regulator receiver domain GT360_20300 PF00196 Bacterial regulatory proteins, luxR family GT360_20305 PF07730 Histidine kinase GT360_20305 PF17200 Single Cache domain 2 GT360_20310 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GT360_20320 PF03480 Bacterial extracellular solute-binding protein, family 7 GT360_20330 PF01632 Ribosomal protein L35 GT360_20335 PF00707 Translation initiation factor IF-3, C-terminal domain GT360_20335 PF05198 Translation initiation factor IF-3, N-terminal domain GT360_20340 PF02824 TGS domain GT360_20340 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GT360_20340 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GT360_20340 PF03129 Anticodon binding domain GT360_20355 PF12843 Putative quorum-sensing-regulated virulence factor GT360_20360 PF00270 DEAD/DEAH box helicase GT360_20360 PF00271 Helicase conserved C-terminal domain GT360_20365 PF00768 D-alanyl-D-alanine carboxypeptidase GT360_20365 PF07943 Penicillin-binding protein 5, C-terminal domain GT360_20370 PF00313 'Cold-shock' DNA-binding domain GT360_20390 PF00248 Aldo/keto reductase family GT360_20400 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) GT360_20405 PF12262 Bacterial virulence factor lipase N-terminal GT360_20410 PF01476 LysM domain GT360_20410 PF08525 Opacity-associated protein A N-terminal motif GT360_20410 PF01551 Peptidase family M23 GT360_20430 PF00990 Diguanylate cyclase, GGDEF domain GT360_20430 PF17151 Periplasmic sensor domain GT360_20435 PF00005 ABC transporter GT360_20440 PF00528 Binding-protein-dependent transport system inner membrane component GT360_20445 PF00528 Binding-protein-dependent transport system inner membrane component GT360_20450 PF12849 PBP superfamily domain GT360_20455 PF00271 Helicase conserved C-terminal domain GT360_20455 PF00270 DEAD/DEAH box helicase GT360_20465 PF17969 L,D-transpeptidase C-terminal domain GT360_20465 PF03734 L,D-transpeptidase catalytic domain GT360_20465 PF01476 LysM domain GT360_20470 PF03441 FAD binding domain of DNA photolyase GT360_20470 PF00875 DNA photolyase GT360_20475 PF13411 MerR HTH family regulatory protein GT360_20480 PF08349 Protein of unknown function (DUF1722) GT360_20485 PF11742 Protein of unknown function (DUF3302) GT360_20490 PF00529 HlyD membrane-fusion protein of T1SS GT360_20490 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GT360_20495 PF12945 Flagellar protein YcgR GT360_20495 PF07238 PilZ domain GT360_20510 PF02630 SCO1/SenC GT360_20530 PF01037 Lrp/AsnC ligand binding domain GT360_20540 PF00474 Sodium:solute symporter family GT360_20550 PF00171 Aldehyde dehydrogenase family GT360_20550 PF01619 Proline dehydrogenase GT360_20550 PF18327 Proline utilization A proline dehydrogenase N-terminal domain GT360_20550 PF14850 DNA-binding domain of Proline dehydrogenase GT360_20555 PF12833 Helix-turn-helix domain GT360_20560 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region GT360_20560 PF01243 Pyridoxamine 5'-phosphate oxidase GT360_20565 PF00529 HlyD membrane-fusion protein of T1SS GT360_20580 PF00664 ABC transporter transmembrane region GT360_20580 PF00005 ABC transporter GT360_20580 PF03412 Peptidase C39 family GT360_20585 PF03466 LysR substrate binding domain GT360_20585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_20590 PF02652 L-lactate permease GT360_20615 PF00970 Oxidoreductase FAD-binding domain GT360_20615 PF00111 2Fe-2S iron-sulfur cluster binding domain GT360_20615 PF00175 Oxidoreductase NAD-binding domain GT360_20620 PF03063 Prismane/CO dehydrogenase family GT360_20625 PF00158 Sigma-54 interaction domain GT360_20625 PF01590 GAF domain GT360_20630 PF00472 RF-1 domain GT360_20635 PF12833 Helix-turn-helix domain GT360_20635 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term GT360_20640 PF00210 Ferritin-like domain GT360_20645 PF01554 MatE GT360_20650 PF00392 Bacterial regulatory proteins, gntR family GT360_20650 PF07702 UTRA domain GT360_20655 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GT360_20655 PF13378 Enolase C-terminal domain-like GT360_20660 PF00367 phosphotransferase system, EIIB GT360_20660 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GT360_20660 PF02378 Phosphotransferase system, EIIC GT360_20670 PF08329 Chitinase A, N-terminal domain GT360_20670 PF00704 Glycosyl hydrolases family 18 GT360_20675 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) GT360_20690 PF13419 Haloacid dehalogenase-like hydrolase GT360_20695 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GT360_20695 PF02806 Alpha amylase, C-terminal all-beta domain GT360_20695 PF00128 Alpha amylase, catalytic domain GT360_20700 PF02446 4-alpha-glucanotransferase GT360_20705 PF00343 Carbohydrate phosphorylase GT360_20710 PF17874 MalT-like TPR region GT360_20710 PF00196 Bacterial regulatory proteins, luxR family GT360_20715 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GT360_20720 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GT360_20720 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GT360_20725 PF01709 Transcriptional regulator GT360_20735 PF00072 Response regulator receiver domain GT360_20735 PF01627 Hpt domain GT360_20735 PF00512 His Kinase A (phospho-acceptor) domain GT360_20735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT360_20735 PF00672 HAMP domain GT360_20735 PF17149 Periplasmic sensor domain found in signal transduction proteins GT360_20760 PF18607 ParA helix turn helix domain GT360_20760 PF13614 AAA domain GT360_20770 PF13718 GNAT acetyltransferase 2 GT360_20770 PF05127 Helicase GT360_20785 PF00664 ABC transporter transmembrane region GT360_20785 PF00005 ABC transporter GT360_20805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_20805 PF03466 LysR substrate binding domain GT360_20815 PF00990 Diguanylate cyclase, GGDEF domain GT360_20820 PF00128 Alpha amylase, catalytic domain GT360_20820 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GT360_20825 PF02264 LamB porin GT360_20835 PF02903 Alpha amylase, N-terminal ig-like domain GT360_20835 PF00128 Alpha amylase, catalytic domain GT360_20840 PF02903 Alpha amylase, N-terminal ig-like domain GT360_20840 PF00128 Alpha amylase, catalytic domain GT360_20845 PF01554 MatE GT360_20850 PF00999 Sodium/hydrogen exchanger family GT360_20850 PF02254 TrkA-N domain GT360_20855 PF02525 Flavodoxin-like fold GT360_20870 PF03466 LysR substrate binding domain GT360_20870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_20875 PF03600 Citrate transporter GT360_20885 PF00375 Sodium:dicarboxylate symporter family GT360_20890 PF02743 Cache domain GT360_20890 PF00672 HAMP domain GT360_20890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT360_20915 PF13419 Haloacid dehalogenase-like hydrolase GT360_20920 PF00849 RNA pseudouridylate synthase GT360_20925 PF02540 NAD synthase GT360_20930 PF01467 Cytidylyltransferase-like GT360_20940 PF07969 Amidohydrolase family GT360_20945 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin GT360_20955 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GT360_20960 PF02566 OsmC-like protein GT360_20980 PF00462 Glutaredoxin GT360_20980 PF08534 Redoxin GT360_21000 PF01557 Fumarylacetoacetate (FAA) hydrolase family GT360_21005 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GT360_21005 PF02790 Cytochrome C oxidase subunit II, transmembrane domain GT360_21010 PF00115 Cytochrome C and Quinol oxidase polypeptide I GT360_21015 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 GT360_21020 PF00510 Cytochrome c oxidase subunit III GT360_21040 PF02628 Cytochrome oxidase assembly protein GT360_21045 PF01040 UbiA prenyltransferase family GT360_21050 PF00990 Diguanylate cyclase, GGDEF domain GT360_21050 PF00563 EAL domain GT360_21050 PF03707 Bacterial signalling protein N terminal repeat GT360_21055 PF00793 DAHP synthetase I family GT360_21060 PF00924 Mechanosensitive ion channel GT360_21065 PF06865 Pyrimidine/purine nucleoside phosphorylase GT360_21070 PF00722 Glycosyl hydrolases family 16 GT360_21095 PF00005 ABC transporter GT360_21095 PF08402 TOBE domain GT360_21100 PF01547 Bacterial extracellular solute-binding protein GT360_21105 PF14785 Maltose transport system permease protein MalF P2 domain GT360_21105 PF00528 Binding-protein-dependent transport system inner membrane component GT360_21110 PF00528 Binding-protein-dependent transport system inner membrane component GT360_21120 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GT360_21125 PF01575 MaoC like domain GT360_21130 PF12849 PBP superfamily domain GT360_21140 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GT360_21145 PF08206 Ribonuclease B OB domain GT360_21145 PF00773 RNB domain GT360_21145 PF00575 S1 RNA binding domain GT360_21150 PF00270 DEAD/DEAH box helicase GT360_21150 PF03880 DbpA RNA binding domain GT360_21150 PF00271 Helicase conserved C-terminal domain GT360_21165 PF13419 Haloacid dehalogenase-like hydrolase GT360_21175 PF00266 Aminotransferase class-V GT360_21185 PF00005 ABC transporter GT360_21190 PF00528 Binding-protein-dependent transport system inner membrane component GT360_21195 PF07702 UTRA domain GT360_21195 PF00392 Bacterial regulatory proteins, gntR family GT360_21210 PF07992 Pyridine nucleotide-disulphide oxidoreductase GT360_21210 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GT360_21220 PF04143 Sulphur transport GT360_21230 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GT360_21230 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GT360_21230 PF04324 BFD-like [2Fe-2S] binding domain GT360_21230 PF18267 Rubredoxin NAD+ reductase C-terminal domain GT360_21230 PF07992 Pyridine nucleotide-disulphide oxidoreductase GT360_21235 PF13806 Rieske-like [2Fe-2S] domain GT360_21245 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GT360_21245 PF10414 Sirohaem synthase dimerisation region GT360_21245 PF14824 Sirohaem biosynthesis protein central GT360_21255 PF00589 Phage integrase family GT360_21255 PF13495 Phage integrase, N-terminal SAM-like domain GT360_21280 PF00589 Phage integrase family GT360_21345 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) GT360_21350 PF01810 LysE type translocator GT360_21355 PF08534 Redoxin GT360_21355 PF00462 Glutaredoxin GT360_21360 PF02567 Phenazine biosynthesis-like protein GT360_21365 PF01427 D-ala-D-ala dipeptidase GT360_21370 PF13673 Acetyltransferase (GNAT) domain GT360_21385 PF02798 Glutathione S-transferase, N-terminal domain GT360_21385 PF00043 Glutathione S-transferase, C-terminal domain GT360_21390 PF02694 Uncharacterised BCR, YnfA/UPF0060 family GT360_21400 PF13419 Haloacid dehalogenase-like hydrolase GT360_21405 PF09905 DNA-binding protein VF530 GT360_21420 PF11734 TilS substrate C-terminal domain GT360_21420 PF00156 Phosphoribosyl transferase domain GT360_21420 PF01171 PP-loop family GT360_21440 PF08274 PhnA Zinc-Ribbon GT360_21440 PF03831 PhnA domain GT360_21450 PF08241 Methyltransferase domain GT360_21465 PF00465 Iron-containing alcohol dehydrogenase GT360_21475 PF13597 Anaerobic ribonucleoside-triphosphate reductase GT360_21475 PF03477 ATP cone domain GT360_21510 PF09339 IclR helix-turn-helix domain GT360_21510 PF01614 Bacterial transcriptional regulator GT360_21520 PF10688 Bacterial inner membrane protein GT360_21535 PF00474 Sodium:solute symporter family GT360_21540 PF02614 Glucuronate isomerase GT360_21555 PF00672 HAMP domain GT360_21555 PF02743 Cache domain GT360_21555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT360_21565 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GT360_21565 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GT360_21570 PF17200 Single Cache domain 2 GT360_21570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GT360_21570 PF00672 HAMP domain GT360_21585 PF00378 Enoyl-CoA hydratase/isomerase GT360_21590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_21590 PF03466 LysR substrate binding domain GT360_21595 PF00892 EamA-like transporter family GT360_21600 PF10928 Protein of unknown function (DUF2810) GT360_21605 PF00690 Cation transporter/ATPase, N-terminus GT360_21605 PF00689 Cation transporting ATPase, C-terminus GT360_21610 PF00893 Small Multidrug Resistance protein GT360_21615 PF00893 Small Multidrug Resistance protein GT360_21625 PF13545 Crp-like helix-turn-helix domain GT360_21625 PF00027 Cyclic nucleotide-binding domain GT360_21635 PF03448 MgtE intracellular N domain GT360_21635 PF01769 Divalent cation transporter GT360_21635 PF00571 CBS domain GT360_21650 PF00313 'Cold-shock' DNA-binding domain GT360_21655 PF03466 LysR substrate binding domain GT360_21655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_21670 PF02347 Glycine cleavage system P-protein GT360_21675 PF01597 Glycine cleavage H-protein GT360_21685 PF01571 Aminomethyltransferase folate-binding domain GT360_21685 PF08669 Glycine cleavage T-protein C-terminal barrel domain GT360_21695 PF01042 Endoribonuclease L-PSP GT360_21700 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase GT360_21715 PF04055 Radical SAM superfamily GT360_21715 PF13186 Iron-sulfur cluster-binding domain GT360_21720 PF03781 Sulfatase-modifying factor enzyme 1 GT360_21725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GT360_21725 PF03466 LysR substrate binding domain GT360_21740 PF00092 von Willebrand factor type A domain GT360_21755 PF07726 ATPase family associated with various cellular activities (AAA) GT360_21755 PF17863 AAA lid domain GT360_21760 PF00884 Sulfatase GT360_21775 PF00092 von Willebrand factor type A domain GT360_21790 PF17863 AAA lid domain GT360_21790 PF07726 ATPase family associated with various cellular activities (AAA) GT360_21795 PF00884 Sulfatase GT360_21800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GT360_21800 PF07730 Histidine kinase GT360_21805 PF00072 Response regulator receiver domain GT360_21805 PF00196 Bacterial regulatory proteins, luxR family GT360_21810 PF13186 Iron-sulfur cluster-binding domain GT360_21810 PF04055 Radical SAM superfamily GT360_21815 PF06628 Catalase-related immune-responsive GT360_21815 PF00199 Catalase