locus-tag class description A6E01_00005 PF00308 Bacterial dnaA protein A6E01_00005 PF08299 Bacterial dnaA protein helix-turn-helix A6E01_00005 PF11638 DnaA N-terminal domain A6E01_00010 PF00497 Bacterial extracellular solute-binding proteins, family 3 A6E01_00015 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_00020 PF00005 ABC transporter A6E01_00025 PF00468 Ribosomal protein L34 A6E01_00030 PF00825 Ribonuclease P A6E01_00040 PF10396 GTP-binding protein TrmE N-terminus A6E01_00040 PF12631 MnmE helical domain A6E01_00040 PF01926 50S ribosome-binding GTPase A6E01_00045 PF00258 Flavodoxin A6E01_00060 PF13614 AAA domain A6E01_00065 PF02195 ParB-like nuclease domain A6E01_00065 PF17762 HTH domain found in ParB protein A6E01_00070 PF03899 ATP synthase I chain A6E01_00075 PF00119 ATP synthase A chain A6E01_00080 PF00137 ATP synthase subunit C A6E01_00085 PF00430 ATP synthase B/B' CF(0) A6E01_00090 PF00213 ATP synthase delta (OSCP) subunit A6E01_00095 PF02874 ATP synthase alpha/beta family, beta-barrel domain A6E01_00095 PF00306 ATP synthase alpha/beta chain, C terminal domain A6E01_00095 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A6E01_00100 PF00231 ATP synthase A6E01_00105 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A6E01_00105 PF02874 ATP synthase alpha/beta family, beta-barrel domain A6E01_00110 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain A6E01_00110 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain A6E01_00115 PF14602 Hexapeptide repeat of succinyl-transferase A6E01_00115 PF12804 MobA-like NTP transferase domain A6E01_00115 PF00132 Bacterial transferase hexapeptide (six repeats) A6E01_00120 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_00125 PF00497 Bacterial extracellular solute-binding proteins, family 3 A6E01_00130 PF07690 Major Facilitator Superfamily A6E01_00135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_00135 PF03466 LysR substrate binding domain A6E01_00140 PF00585 C-terminal regulatory domain of Threonine dehydratase A6E01_00140 PF00291 Pyridoxal-phosphate dependent enzyme A6E01_00145 PF00920 Dehydratase family A6E01_00150 PF01063 Amino-transferase class IV A6E01_00160 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A6E01_00160 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A6E01_00160 PF00205 Thiamine pyrophosphate enzyme, central domain A6E01_00165 PF13335 Magnesium chelatase, subunit ChlI C-terminal A6E01_00165 PF01078 Magnesium chelatase, subunit ChlI A6E01_00170 PF01553 Acyltransferase A6E01_00175 PF01323 DSBA-like thioredoxin domain A6E01_00180 PF01636 Phosphotransferase enzyme family A6E01_00185 PF12801 4Fe-4S binding domain A6E01_00185 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase A6E01_00185 PF13746 4Fe-4S dicluster domain A6E01_00190 PF06288 Protein of unknown function (DUF1040) A6E01_00195 PF07070 SpoOM protein A6E01_00200 PF02386 Cation transport protein A6E01_00205 PF02080 TrkA-C domain A6E01_00205 PF02254 TrkA-N domain A6E01_00210 PF01029 NusB family A6E01_00210 PF01189 16S rRNA methyltransferase RsmB/F A6E01_00215 PF00551 Formyl transferase A6E01_00215 PF02911 Formyl transferase, C-terminal domain A6E01_00220 PF01327 Polypeptide deformylase A6E01_00225 PF02481 DNA recombination-mediator protein A A6E01_00225 PF17782 DprA winged helix domain A6E01_00235 PF01396 Topoisomerase DNA binding C4 zinc finger A6E01_00240 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain A6E01_00240 PF02222 ATP-grasp domain A6E01_00245 PF00731 AIR carboxylase A6E01_00250 PF01300 Telomere recombination A6E01_00270 PF00132 Bacterial transferase hexapeptide (six repeats) A6E01_00315 PF07719 Tetratricopeptide repeat A6E01_00315 PF07219 HemY protein N-terminus A6E01_00320 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase A6E01_00325 PF02602 Uroporphyrinogen-III synthase HemD A6E01_00330 PF03900 Porphobilinogen deaminase, C-terminal domain A6E01_00330 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain A6E01_00335 PF12633 Adenylate cyclase NT domain A6E01_00335 PF01295 Adenylate cyclase, class-I A6E01_00340 PF01491 Frataxin-like domain A6E01_00345 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain A6E01_00345 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain A6E01_00350 PF01678 Diaminopimelate epimerase A6E01_00365 PF13419 Haloacid dehalogenase-like hydrolase A6E01_00385 PF12146 Serine aminopeptidase, S33 A6E01_00390 PF01810 LysE type translocator A6E01_00395 PF01022 Bacterial regulatory protein, arsR family A6E01_00400 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A6E01_00400 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain A6E01_00435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A6E01_00435 PF00005 ABC transporter A6E01_00440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A6E01_00450 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_00450 PF12911 N-terminal TM domain of oligopeptide transport permease C A6E01_00460 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6E01_00460 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A6E01_00465 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ A6E01_00470 PF01432 Peptidase family M3 A6E01_00475 PF01037 Lrp/AsnC ligand binding domain A6E01_00480 PF04445 Putative SAM-dependent methyltransferase A6E01_00490 PF00582 Universal stress protein family A6E01_00495 PF00210 Ferritin-like domain A6E01_00500 PF10625 Universal stress protein B (UspB) A6E01_00525 PF00356 Bacterial regulatory proteins, lacI family A6E01_00530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A6E01_00530 PF00005 ABC transporter A6E01_00535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A6E01_00535 PF00005 ABC transporter A6E01_00545 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_00550 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A6E01_00565 PF01209 ubiE/COQ5 methyltransferase family A6E01_00580 PF02416 mttA/Hcf106 family A6E01_00585 PF02416 mttA/Hcf106 family A6E01_00590 PF00902 Sec-independent protein translocase protein (TatC) A6E01_00595 PF01026 TatD related DNase A6E01_00600 PF00490 Delta-aminolevulinic acid dehydratase A6E01_00610 PF01367 5'-3' exonuclease, C-terminal SAM fold A6E01_00610 PF00476 DNA polymerase family A A6E01_00610 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain A6E01_00610 PF01612 3'-5' exonuclease A6E01_00615 PF01926 50S ribosome-binding GTPase A6E01_00620 PF13442 Cytochrome C oxidase, cbb3-type, subunit III A6E01_00635 PF04220 Der GTPase activator (YihI) A6E01_00645 PF04055 Radical SAM superfamily A6E01_00645 PF06969 HemN C-terminal domain A6E01_00650 PF02954 Bacterial regulatory protein, Fis family A6E01_00650 PF00072 Response regulator receiver domain A6E01_00650 PF00158 Sigma-54 interaction domain A6E01_00655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6E01_00655 PF00512 His Kinase A (phospho-acceptor) domain A6E01_00655 PF00989 PAS fold A6E01_00660 PF03951 Glutamine synthetase, beta-Grasp domain A6E01_00660 PF00120 Glutamine synthetase, catalytic domain A6E01_00670 PF03631 Virulence factor BrkB A6E01_00675 PF02580 D-Tyr-tRNA(Tyr) deacylase A6E01_00680 PF00583 Acetyltransferase (GNAT) family A6E01_00680 PF09500 Putative thioesterase (yiiD_Cterm) A6E01_00690 PF01293 Phosphoenolpyruvate carboxykinase A6E01_00695 PF01430 Hsp33 protein A6E01_00700 PF01479 S4 domain A6E01_00705 PF11356 Type II secretion system protein C A6E01_00710 PF00263 Bacterial type II and III secretion system protein A6E01_00710 PF03958 Bacterial type II/III secretion system short domain A6E01_00715 PF00437 Type II/IV secretion system protein A6E01_00720 PF00482 Type II secretion system (T2SS), protein F A6E01_00725 PF07963 Prokaryotic N-terminal methylation motif A6E01_00725 PF08334 Type II secretion system (T2SS), protein G A6E01_00730 PF12019 Type II transport protein GspH A6E01_00735 PF07963 Prokaryotic N-terminal methylation motif A6E01_00735 PF02501 Type II secretion system (T2SS), protein I A6E01_00740 PF11612 Type II secretion system (T2SS), protein J A6E01_00740 PF07963 Prokaryotic N-terminal methylation motif A6E01_00745 PF03934 Type II secretion system (T2SS), protein K A6E01_00750 PF12693 GspL periplasmic domain A6E01_00750 PF05134 Type II secretion system (T2SS), protein L A6E01_00755 PF04612 Type II secretion system (T2SS), protein M A6E01_00760 PF01203 Type II secretion system (T2SS), protein N A6E01_00765 PF00293 NUDIX domain A6E01_00770 PF00459 Inositol monophosphatase family A6E01_00775 PF00561 alpha/beta hydrolase fold A6E01_00780 PF00156 Phosphoribosyl transferase domain A6E01_00785 PF01521 Iron-sulphur cluster biosynthesis A6E01_00785 PF01106 NifU-like domain A6E01_00790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6E01_00790 PF00512 His Kinase A (phospho-acceptor) domain A6E01_00790 PF00672 HAMP domain A6E01_00795 PF00486 Transcriptional regulatory protein, C terminal A6E01_00795 PF00072 Response regulator receiver domain A6E01_00800 PF01272 Transcription elongation factor, GreA/GreB, C-term A6E01_00800 PF03449 Transcription elongation factor, N-terminal A6E01_00805 PF08443 RimK-like ATP-grasp domain A6E01_00805 PF18030 RimK PreATP-grasp domain A6E01_00810 PF17674 HHH domain A6E01_00810 PF00575 S1 RNA binding domain A6E01_00810 PF16921 Tex protein YqgF-like domain A6E01_00810 PF09371 Tex-like protein N-terminal domain A6E01_00815 PF00271 Helicase conserved C-terminal domain A6E01_00815 PF00270 DEAD/DEAH box helicase A6E01_00815 PF17191 RecG wedge domain A6E01_00825 PF00471 Ribosomal protein L33 A6E01_00840 PF01370 NAD dependent epimerase/dehydratase family A6E01_00845 PF00534 Glycosyl transferases group 1 A6E01_00845 PF00862 Sucrose synthase A6E01_00850 PF01467 Cytidylyltransferase-like A6E01_00855 PF01075 Glycosyltransferase family 9 (heptosyltransferase) A6E01_00865 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) A6E01_00875 PF00534 Glycosyl transferases group 1 A6E01_00875 PF13439 Glycosyltransferase Family 4 A6E01_00890 PF02719 Polysaccharide biosynthesis protein A6E01_00895 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family A6E01_00900 PF02348 Cytidylyltransferase A6E01_00910 PF03102 NeuB family A6E01_00910 PF08666 SAF domain A6E01_00915 PF00534 Glycosyl transferases group 1 A6E01_00920 PF00535 Glycosyl transferase family 2 A6E01_00925 PF01075 Glycosyltransferase family 9 (heptosyltransferase) A6E01_00930 PF04932 O-Antigen ligase A6E01_00935 PF03279 Bacterial lipid A biosynthesis acyltransferase A6E01_00940 PF01370 NAD dependent epimerase/dehydratase family A6E01_00945 PF02706 Chain length determinant protein A6E01_00950 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain A6E01_00950 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain A6E01_00970 PF00356 Bacterial regulatory proteins, lacI family A6E01_00975 PF00270 DEAD/DEAH box helicase A6E01_00975 PF18319 PriA DNA helicase Cys-rich region (CRR) domain A6E01_00975 PF18074 Primosomal protein N C-terminal domain A6E01_00975 PF17764 3′ DNA-binding domain (3′BD) A6E01_00975 PF00271 Helicase conserved C-terminal domain A6E01_00985 PF00390 Malic enzyme, N-terminal domain A6E01_00985 PF03949 Malic enzyme, NAD binding domain A6E01_00990 PF01340 Met Apo-repressor, MetJ A6E01_00995 PF01053 Cys/Met metabolism PLP-dependent enzyme A6E01_01000 PF03447 Homoserine dehydrogenase, NAD binding domain A6E01_01000 PF00742 Homoserine dehydrogenase A6E01_01000 PF00696 Amino acid kinase family A6E01_01005 PF02219 Methylenetetrahydrofolate reductase A6E01_01010 PF10400 Virulence activator alpha C-term A6E01_01010 PF03551 Transcriptional regulator PadR-like family A6E01_01025 PF02774 Semialdehyde dehydrogenase, dimerisation domain A6E01_01025 PF01118 Semialdehyde dehydrogenase, NAD binding domain A6E01_01030 PF00696 Amino acid kinase family A6E01_01035 PF00764 Arginosuccinate synthase A6E01_01040 PF00206 Lyase A6E01_01040 PF14698 Argininosuccinate lyase C-terminal A6E01_01040 PF00583 Acetyltransferase (GNAT) family A6E01_01045 PF01042 Endoribonuclease L-PSP A6E01_01050 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6E01_01050 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A6E01_01055 PF08534 Redoxin A6E01_01055 PF00462 Glutaredoxin A6E01_01060 PF03466 LysR substrate binding domain A6E01_01060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_01065 PF00905 Penicillin binding protein transpeptidase domain A6E01_01065 PF17092 Penicillin-binding protein OB-like domain A6E01_01065 PF00912 Transglycosylase A6E01_01085 PF03958 Bacterial type II/III secretion system short domain A6E01_01085 PF00263 Bacterial type II and III secretion system protein A6E01_01085 PF07660 Secretin and TonB N terminus short domain A6E01_01085 PF11741 AMIN domain A6E01_01090 PF01202 Shikimate kinase A6E01_01095 PF01761 3-dehydroquinate synthase A6E01_01105 PF02086 D12 class N6 adenine-specific DNA methyltransferase A6E01_01110 PF00834 Ribulose-phosphate 3 epimerase family A6E01_01115 PF13419 Haloacid dehalogenase-like hydrolase A6E01_01120 PF00579 tRNA synthetases class I (W and Y) A6E01_01125 PF00117 Glutamine amidotransferase class-I A6E01_01130 PF00202 Aminotransferase class-III A6E01_01135 PF04958 Arginine N-succinyltransferase beta subunit A6E01_01140 PF00171 Aldehyde dehydrogenase family A6E01_01150 PF00027 Cyclic nucleotide-binding domain A6E01_01150 PF13545 Crp-like helix-turn-helix domain A6E01_01155 PF00485 Phosphoribulokinase / Uridine kinase family A6E01_01160 PF06794 Uncharacterised protein family (UPF0270) A6E01_01165 PF00561 alpha/beta hydrolase fold A6E01_01175 PF12848 ABC transporter A6E01_01175 PF00005 ABC transporter A6E01_01180 PF02525 Flavodoxin-like fold A6E01_01185 PF00999 Sodium/hydrogen exchanger family A6E01_01185 PF02254 TrkA-N domain A6E01_01195 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A6E01_01200 PF01112 Asparaginase A6E01_01205 PF04102 SlyX A6E01_01210 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A6E01_01210 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase A6E01_01215 PF08348 YheO-like PAS domain A6E01_01215 PF13309 HTH domain A6E01_01220 PF02635 DsrE/DsrF-like family A6E01_01225 PF02635 DsrE/DsrF-like family A6E01_01235 PF00164 Ribosomal protein S12/S23 A6E01_01240 PF00177 Ribosomal protein S7p/S5e A6E01_01245 PF00009 Elongation factor Tu GTP binding domain A6E01_01245 PF00679 Elongation factor G C-terminus A6E01_01245 PF03764 Elongation factor G, domain IV A6E01_01245 PF14492 Elongation Factor G, domain II A6E01_01245 PF03144 Elongation factor Tu domain 2 A6E01_01250 PF03144 Elongation factor Tu domain 2 A6E01_01250 PF00009 Elongation factor Tu GTP binding domain A6E01_01250 PF03143 Elongation factor Tu C-terminal domain A6E01_01255 PF00338 Ribosomal protein S10p/S20e A6E01_01285 PF00237 Ribosomal protein L22p/L17e A6E01_01290 PF07650 KH domain A6E01_01290 PF00189 Ribosomal protein S3, C-terminal domain A6E01_01295 PF00252 Ribosomal protein L16p/L10e A6E01_01300 PF00831 Ribosomal L29 protein A6E01_01305 PF00366 Ribosomal protein S17 A6E01_01310 PF00238 Ribosomal protein L14p/L23e A6E01_01315 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 A6E01_01315 PF00467 KOW motif A6E01_01320 PF00673 ribosomal L5P family C-terminus A6E01_01320 PF00281 Ribosomal protein L5 A6E01_01325 PF00253 Ribosomal protein S14p/S29e A6E01_01335 PF00347 Ribosomal protein L6 A6E01_01340 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast A6E01_01345 PF03719 Ribosomal protein S5, C-terminal domain A6E01_01345 PF00333 Ribosomal protein S5, N-terminal domain A6E01_01350 PF00327 Ribosomal protein L30p/L7e A6E01_01360 PF00344 SecY translocase A6E01_01365 PF00444 Ribosomal protein L36 A6E01_01370 PF00416 Ribosomal protein S13/S18 A6E01_01375 PF00411 Ribosomal protein S11 A6E01_01380 PF00163 Ribosomal protein S4/S9 N-terminal domain A6E01_01380 PF01479 S4 domain A6E01_01390 PF01196 Ribosomal protein L17 A6E01_01400 PF01053 Cys/Met metabolism PLP-dependent enzyme A6E01_01405 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase A6E01_01405 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A6E01_01410 PF08525 Opacity-associated protein A N-terminal motif A6E01_01410 PF04225 Opacity-associated protein A LysM-like domain A6E01_01415 PF13673 Acetyltransferase (GNAT) domain A6E01_01420 PF14824 Sirohaem biosynthesis protein central A6E01_01420 PF10414 Sirohaem synthase dimerisation region A6E01_01420 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A6E01_01435 PF00005 ABC transporter A6E01_01435 PF00027 Cyclic nucleotide-binding domain A6E01_01445 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) A6E01_01450 PF01625 Peptide methionine sulfoxide reductase A6E01_01455 PF07244 Surface antigen variable number repeat A6E01_01455 PF17243 POTRA domain TamA domain 1 A6E01_01455 PF01103 Surface antigen A6E01_01460 PF04357 TamB, inner membrane protein subunit of TAM complex A6E01_01465 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like A6E01_01470 PF08212 Lipocalin-like domain A6E01_01475 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain A6E01_01480 PF01225 Mur ligase family, catalytic domain A6E01_01480 PF02875 Mur ligase family, glutamate ligase domain A6E01_01480 PF08245 Mur ligase middle domain A6E01_01485 PF02441 Flavoprotein A6E01_01490 PF02562 PhoH-like protein A6E01_01490 PF13638 PIN domain A6E01_01500 PF00849 RNA pseudouridylate synthase A6E01_01505 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A6E01_01505 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A6E01_01510 PF00582 Universal stress protein family A6E01_01520 PF16868 NMT1-like family A6E01_01530 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain A6E01_01530 PF00056 lactate/malate dehydrogenase, NAD binding domain A6E01_01540 PF00348 Polyprenyl synthetase A6E01_01545 PF00829 Ribosomal prokaryotic L21 protein A6E01_01550 PF01016 Ribosomal L27 protein A6E01_01555 PF01018 GTP1/OBG A6E01_01555 PF01926 50S ribosome-binding GTPase A6E01_01560 PF04632 Fusaric acid resistance protein family A6E01_01565 PF12821 Threonine/Serine exporter, ThrE A6E01_01565 PF06738 Putative threonine/serine exporter A6E01_01570 PF12821 Threonine/Serine exporter, ThrE A6E01_01575 PF00186 Dihydrofolate reductase A6E01_01580 PF00149 Calcineurin-like phosphoesterase A6E01_01595 PF04166 Pyridoxal phosphate biosynthetic protein PdxA A6E01_01600 PF00639 PPIC-type PPIASE domain A6E01_01600 PF09312 SurA N-terminal domain A6E01_01605 PF03968 OstA-like protein A6E01_01605 PF04453 LPS transport system D A6E01_01610 PF00226 DnaJ domain A6E01_01610 PF05099 Tellurite resistance protein TerB A6E01_01625 PF00694 Aconitase C-terminal domain A6E01_01630 PF00330 Aconitase family (aconitate hydratase) A6E01_01635 PF00180 Isocitrate/isopropylmalate dehydrogenase A6E01_01640 PF08502 LeuA allosteric (dimerisation) domain A6E01_01640 PF00682 HMGL-like A6E01_01655 PF00873 AcrB/AcrD/AcrF family A6E01_01660 PF01569 PAP2 superfamily A6E01_01670 PF03466 LysR substrate binding domain A6E01_01670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_01675 PF00501 AMP-binding enzyme A6E01_01680 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A6E01_01680 PF00205 Thiamine pyrophosphate enzyme, central domain A6E01_01680 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A6E01_01685 PF10369 Small subunit of acetolactate synthase A6E01_01690 PF00224 Pyruvate kinase, barrel domain A6E01_01690 PF02887 Pyruvate kinase, alpha/beta domain A6E01_01695 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A6E01_01700 PF03466 LysR substrate binding domain A6E01_01700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_01710 PF00753 Metallo-beta-lactamase superfamily A6E01_01710 PF14864 Alkyl sulfatase C-terminal A6E01_01710 PF14863 Alkyl sulfatase dimerisation A6E01_01730 PF01554 MatE A6E01_01755 PF01226 Formate/nitrite transporter A6E01_01760 PF00356 Bacterial regulatory proteins, lacI family A6E01_01760 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family A6E01_01765 PF00920 Dehydratase family A6E01_01770 PF01202 Shikimate kinase A6E01_01775 PF02447 GntP family permease A6E01_01780 PF01081 KDPG and KHG aldolase A6E01_01785 PF07690 Major Facilitator Superfamily A6E01_01790 PF03466 LysR substrate binding domain A6E01_01790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_01795 PF00571 CBS domain A6E01_01795 PF00005 ABC transporter A6E01_01800 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_01835 PF03979 Sigma-70 factor, region 1.1 A6E01_01835 PF04542 Sigma-70 region 2 A6E01_01835 PF04539 Sigma-70 region 3 A6E01_01835 PF00140 Sigma-70 factor, region 1.2 A6E01_01835 PF04545 Sigma-70, region 4 A6E01_01835 PF04546 Sigma-70, non-essential region A6E01_01840 PF08278 DNA primase DnaG DnaB-binding A6E01_01840 PF10410 DnaB-helicase binding domain of primase A6E01_01840 PF08275 DNA primase catalytic core, N-terminal domain A6E01_01840 PF01807 CHC2 zinc finger A6E01_01845 PF09424 Yqey-like protein A6E01_01850 PF01165 Ribosomal protein S21 A6E01_01870 PF02152 Dihydroneopterin aldolase A6E01_01875 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) A6E01_01885 PF01743 Poly A polymerase head domain A6E01_01885 PF01966 HD domain A6E01_01885 PF12627 Probable RNA and SrmB- binding site of polymerase A A6E01_01890 PF13401 AAA domain A6E01_01890 PF01471 Putative peptidoglycan binding domain A6E01_01900 PF08239 Bacterial SH3 domain A6E01_01905 PF01384 Phosphate transporter family A6E01_01910 PF01865 Protein of unknown function DUF47 A6E01_01915 PF01928 CYTH domain A6E01_01920 PF08335 GlnD PII-uridylyltransferase A6E01_01920 PF03710 Glutamate-ammonia ligase adenylyltransferase A6E01_01925 PF01467 Cytidylyltransferase-like A6E01_01925 PF00294 pfkB family carbohydrate kinase A6E01_01930 PF02321 Outer membrane efflux protein A6E01_01935 PF00293 NUDIX domain A6E01_01940 PF06853 Protein of unknown function (DUF1249) A6E01_01945 PF00149 Calcineurin-like phosphoesterase A6E01_01950 PF05728 Uncharacterised protein family (UPF0227) A6E01_01955 PF00986 DNA gyrase B subunit, carboxyl terminus A6E01_01955 PF01751 Toprim domain A6E01_01955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6E01_01955 PF00204 DNA gyrase B A6E01_01960 PF03989 DNA gyrase C-terminal domain, beta-propeller A6E01_01960 PF00521 DNA gyrase/topoisomerase IV, subunit A A6E01_01965 PF13180 PDZ domain A6E01_01970 PF13180 PDZ domain A6E01_01970 PF00595 PDZ domain A6E01_01980 PF03969 AFG1-like ATPase A6E01_01985 PF00572 Ribosomal protein L13 A6E01_01995 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal A6E01_01995 PF00355 Rieske [2Fe-2S] domain A6E01_02000 PF00032 Cytochrome b(C-terminal)/b6/petD A6E01_02000 PF00033 Cytochrome b/b6/petB A6E01_02005 PF02167 Cytochrome C1 family A6E01_02010 PF02798 Glutathione S-transferase, N-terminal domain A6E01_02010 PF00043 Glutathione S-transferase, C-terminal domain A6E01_02015 PF04386 Stringent starvation protein B A6E01_02020 PF04972 BON domain A6E01_02025 PF13580 SIS domain A6E01_02030 PF02021 Uncharacterised protein family UPF0102 A6E01_02035 PF04348 LppC putative lipoprotein A6E01_02040 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A6E01_02050 PF01795 MraW methylase family A6E01_02055 PF04999 Cell division protein FtsL A6E01_02060 PF00905 Penicillin binding protein transpeptidase domain A6E01_02060 PF03717 Penicillin-binding Protein dimerisation domain A6E01_02065 PF01225 Mur ligase family, catalytic domain A6E01_02065 PF08245 Mur ligase middle domain A6E01_02065 PF02875 Mur ligase family, glutamate ligase domain A6E01_02070 PF01225 Mur ligase family, catalytic domain A6E01_02070 PF02875 Mur ligase family, glutamate ligase domain A6E01_02070 PF08245 Mur ligase middle domain A6E01_02075 PF00953 Glycosyl transferase family 4 A6E01_02075 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 A6E01_02080 PF02875 Mur ligase family, glutamate ligase domain A6E01_02080 PF08245 Mur ligase middle domain A6E01_02085 PF01098 Cell cycle protein A6E01_02095 PF02875 Mur ligase family, glutamate ligase domain A6E01_02095 PF08245 Mur ligase middle domain A6E01_02095 PF01225 Mur ligase family, catalytic domain A6E01_02100 PF03799 Cell division protein FtsQ A6E01_02100 PF08478 POTRA domain, FtsQ-type A6E01_02105 PF02491 SHS2 domain inserted in FTSA A6E01_02110 PF00091 Tubulin/FtsZ family, GTPase domain A6E01_02110 PF12327 FtsZ family, C-terminal domain A6E01_02125 PF02810 SEC-C motif A6E01_02125 PF07517 SecA DEAD-like domain A6E01_02125 PF01043 SecA preprotein cross-linking domain A6E01_02125 PF07516 SecA Wing and Scaffold domain A6E01_02130 PF00293 NUDIX domain A6E01_02135 PF05173 Dihydrodipicolinate reductase, C-terminus A6E01_02135 PF01113 Dihydrodipicolinate reductase, N-terminus A6E01_02140 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain A6E01_02140 PF00117 Glutamine amidotransferase class-I A6E01_02145 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A6E01_02145 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A6E01_02145 PF02142 MGS-like domain A6E01_02150 PF01925 Sulfite exporter TauE/SafE A6E01_02155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_02155 PF03466 LysR substrate binding domain A6E01_02160 PF03458 UPF0126 domain A6E01_02175 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster A6E01_02175 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6E01_02180 PF01645 Conserved region in glutamate synthase A6E01_02180 PF04898 Glutamate synthase central domain A6E01_02180 PF00310 Glutamine amidotransferases class-II A6E01_02180 PF01493 GXGXG motif A6E01_02185 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster A6E01_02185 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6E01_02190 PF00310 Glutamine amidotransferases class-II A6E01_02190 PF04898 Glutamate synthase central domain A6E01_02190 PF01645 Conserved region in glutamate synthase A6E01_02190 PF01493 GXGXG motif A6E01_02195 PF16199 Radical_SAM C-terminal domain A6E01_02195 PF04055 Radical SAM superfamily A6E01_02200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6E01_02200 PF00072 Response regulator receiver domain A6E01_02200 PF18415 Histidine kinase receptor ArcB trans-membrane domain A6E01_02200 PF01627 Hpt domain A6E01_02200 PF00989 PAS fold A6E01_02200 PF00512 His Kinase A (phospho-acceptor) domain A6E01_02210 PF00072 Response regulator receiver domain A6E01_02210 PF00486 Transcriptional regulatory protein, C terminal A6E01_02220 PF00696 Amino acid kinase family A6E01_02220 PF01842 ACT domain A6E01_02220 PF13840 ACT domain A6E01_02220 PF00742 Homoserine dehydrogenase A6E01_02220 PF03447 Homoserine dehydrogenase, NAD binding domain A6E01_02225 PF00288 GHMP kinases N terminal domain A6E01_02225 PF08544 GHMP kinases C terminal A6E01_02230 PF14821 Threonine synthase N terminus A6E01_02230 PF00291 Pyridoxal-phosphate dependent enzyme A6E01_02235 PF01228 Glycine radical A6E01_02240 PF01261 Xylose isomerase-like TIM barrel A6E01_02245 PF03167 Uracil DNA glycosylase superfamily A6E01_02260 PF01235 Sodium:alanine symporter family A6E01_02270 PF13302 Acetyltransferase (GNAT) domain A6E01_02280 PF00271 Helicase conserved C-terminal domain A6E01_02280 PF00270 DEAD/DEAH box helicase A6E01_02285 PF05175 Methyltransferase small domain A6E01_02290 PF05525 Branched-chain amino acid transport protein A6E01_02295 PF00258 Flavodoxin A6E01_02300 PF00589 Phage integrase family A6E01_02300 PF02899 Phage integrase, N-terminal SAM-like domain A6E01_02305 PF10411 Disulfide bond isomerase protein N-terminus A6E01_02305 PF13098 Thioredoxin-like domain A6E01_02310 PF01368 DHH family A6E01_02310 PF02272 DHHA1 domain A6E01_02310 PF17768 RecJ OB domain A6E01_02315 PF03462 PCRF domain A6E01_02315 PF00472 RF-1 domain A6E01_02320 PF01336 OB-fold nucleic acid binding domain A6E01_02320 PF00152 tRNA synthetases class II (D, K and N) A6E01_02325 PF00571 CBS domain A6E01_02335 PF02547 Queuosine biosynthesis protein A6E01_02340 PF01702 Queuine tRNA-ribosyltransferase A6E01_02345 PF02699 Preprotein translocase subunit A6E01_02350 PF07549 SecD/SecF GG Motif A6E01_02350 PF13721 SecD export protein N-terminal TM region A6E01_02350 PF02355 Protein export membrane protein A6E01_02355 PF02355 Protein export membrane protein A6E01_02355 PF07549 SecD/SecF GG Motif A6E01_02360 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A6E01_02365 PF02401 LytB protein A6E01_02370 PF02554 Carbon starvation protein CstA A6E01_02380 PF13580 SIS domain A6E01_02385 PF03702 Anhydro-N-acetylmuramic acid kinase A6E01_02390 PF00933 Glycosyl hydrolase family 3 N terminal domain A6E01_02395 PF00072 Response regulator receiver domain A6E01_02395 PF04397 LytTr DNA-binding domain A6E01_02400 PF07694 5TMR of 5TMR-LYT A6E01_02400 PF06580 Histidine kinase A6E01_02405 PF00793 DAHP synthetase I family A6E01_02410 PF02153 Prephenate dehydrogenase A6E01_02410 PF01817 Chorismate mutase type II A6E01_02415 PF12848 ABC transporter A6E01_02415 PF00005 ABC transporter A6E01_02420 PF01464 Transglycosylase SLT domain A6E01_02420 PF14718 Soluble lytic murein transglycosylase L domain A6E01_02425 PF01371 Trp repressor protein A6E01_02430 PF01931 Protein of unknown function DUF84 A6E01_02435 PF01817 Chorismate mutase type II A6E01_02435 PF00800 Prephenate dehydratase A6E01_02440 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein A6E01_02445 PF01464 Transglycosylase SLT domain A6E01_02445 PF01551 Peptidase family M23 A6E01_02445 PF10145 Phage-related minor tail protein A6E01_02450 PF13525 Outer membrane lipoprotein A6E01_02455 PF00849 RNA pseudouridylate synthase A6E01_02455 PF01479 S4 domain A6E01_02465 PF07724 AAA domain (Cdc48 subfamily) A6E01_02465 PF10431 C-terminal, D2-small domain, of ClpB protein A6E01_02465 PF00004 ATPase family associated with various cellular activities (AAA) A6E01_02465 PF02861 Clp amino terminal domain, pathogenicity island component A6E01_02465 PF17871 AAA lid domain A6E01_02510 PF00892 EamA-like transporter family A6E01_02520 PF00037 4Fe-4S binding domain A6E01_02530 PF04381 Putative exonuclease, RdgC A6E01_02535 PF00072 Response regulator receiver domain A6E01_02535 PF00486 Transcriptional regulatory protein, C terminal A6E01_02540 PF00989 PAS fold A6E01_02540 PF00512 His Kinase A (phospho-acceptor) domain A6E01_02540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6E01_02540 PF11808 Phosphate regulon sensor protein PhoR A6E01_02545 PF12849 PBP superfamily domain A6E01_02550 PF02541 Ppx/GppA phosphatase family A6E01_02555 PF02503 Polyphosphate kinase middle domain A6E01_02555 PF13090 Polyphosphate kinase C-terminal domain 2 A6E01_02555 PF17941 Polyphosphate kinase C-terminal domain 1 A6E01_02555 PF13089 Polyphosphate kinase N-terminal domain A6E01_02560 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_02565 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_02570 PF00005 ABC transporter A6E01_02575 PF01895 PhoU domain A6E01_02580 PF03932 CutC family A6E01_02585 PF00578 AhpC/TSA family A6E01_02585 PF10417 C-terminal domain of 1-Cys peroxiredoxin A6E01_02590 PF03466 LysR substrate binding domain A6E01_02590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_02600 PF02976 DNA mismatch repair enzyme MutH A6E01_02610 PF00391 PEP-utilising enzyme, mobile domain A6E01_02610 PF05524 PEP-utilising enzyme, N-terminal A6E01_02610 PF01590 GAF domain A6E01_02610 PF02896 PEP-utilising enzyme, TIM barrel domain A6E01_02615 PF01925 Sulfite exporter TauE/SafE A6E01_02620 PF01790 Prolipoprotein diacylglyceryl transferase A6E01_02625 PF00303 Thymidylate synthase A6E01_02635 PF02690 Na+/Pi-cotransporter A6E01_02640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_02640 PF03466 LysR substrate binding domain A6E01_02645 PF01022 Bacterial regulatory protein, arsR family A6E01_02655 PF03023 Lipid II flippase MurJ A6E01_02660 PF01687 Riboflavin kinase A6E01_02660 PF06574 FAD synthetase A6E01_02665 PF08264 Anticodon-binding domain of tRNA A6E01_02665 PF00133 tRNA synthetases class I (I, L, M and V) A6E01_02665 PF06827 Zinc finger found in FPG and IleRS A6E01_02670 PF01252 Signal peptidase (SPase) II A6E01_02675 PF03840 Preprotein translocase SecG subunit A6E01_02690 PF02576 RimP N-terminal domain A6E01_02690 PF17384 RimP C-terminal SH3 domain A6E01_02695 PF13184 NusA-like KH domain A6E01_02695 PF08529 NusA N-terminal domain A6E01_02695 PF00575 S1 RNA binding domain A6E01_02700 PF04760 Translation initiation factor IF-2, N-terminal region A6E01_02700 PF11987 Translation-initiation factor 2 A6E01_02700 PF00009 Elongation factor Tu GTP binding domain A6E01_02700 PF08364 Bacterial translation initiation factor IF-2 associated region A6E01_02705 PF02033 Ribosome-binding factor A A6E01_02715 PF00312 Ribosomal protein S15 A6E01_02720 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain A6E01_02720 PF01138 3' exoribonuclease family, domain 1 A6E01_02720 PF03725 3' exoribonuclease family, domain 2 A6E01_02720 PF00575 S1 RNA binding domain A6E01_02720 PF00013 KH domain A6E01_02725 PF13181 Tetratricopeptide repeat A6E01_02725 PF07719 Tetratricopeptide repeat A6E01_02735 PF00356 Bacterial regulatory proteins, lacI family A6E01_02740 PF00356 Bacterial regulatory proteins, lacI family A6E01_02760 PF13508 Acetyltransferase (GNAT) domain A6E01_02770 PF00583 Acetyltransferase (GNAT) family A6E01_02775 PF03063 Prismane/CO dehydrogenase family A6E01_02780 PF00175 Oxidoreductase NAD-binding domain A6E01_02780 PF00042 Globin A6E01_02780 PF00970 Oxidoreductase FAD-binding domain A6E01_02790 PF01026 TatD related DNase A6E01_02795 PF07662 Na+ dependent nucleoside transporter C-terminus A6E01_02795 PF01773 Na+ dependent nucleoside transporter N-terminus A6E01_02795 PF07670 Nucleoside recognition A6E01_02805 PF01791 DeoC/LacD family aldolase A6E01_02810 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain A6E01_02810 PF02885 Glycosyl transferase family, helical bundle domain A6E01_02810 PF00591 Glycosyl transferase family, a/b domain A6E01_02815 PF01676 Metalloenzyme superfamily A6E01_02820 PF01048 Phosphorylase superfamily A6E01_02830 PF18429 Domain of unknown function (DUF5609) A6E01_02835 PF18073 Rubredoxin metal binding domain A6E01_02840 PF00679 Elongation factor G C-terminus A6E01_02840 PF14492 Elongation Factor G, domain II A6E01_02840 PF03144 Elongation factor Tu domain 2 A6E01_02840 PF03764 Elongation factor G, domain IV A6E01_02840 PF00009 Elongation factor Tu GTP binding domain A6E01_02845 PF00501 AMP-binding enzyme A6E01_02850 PF01609 Transposase DDE domain A6E01_02850 PF13808 DDE_Tnp_1-associated A6E01_02865 PF13495 Phage integrase, N-terminal SAM-like domain A6E01_02865 PF00589 Phage integrase family A6E01_02910 PF00263 Bacterial type II and III secretion system protein A6E01_02910 PF13629 Pilus formation protein N terminal region A6E01_02910 PF04972 BON domain A6E01_02940 PF00437 Type II/IV secretion system protein A6E01_02960 PF02837 Glycosyl hydrolases family 2, sugar binding domain A6E01_02960 PF00703 Glycosyl hydrolases family 2 A6E01_02960 PF16353 Domain of unknown function(DUF4981) A6E01_02960 PF02836 Glycosyl hydrolases family 2, TIM barrel domain A6E01_02960 PF02929 Beta galactosidase small chain A6E01_02965 PF17912 MalK OB fold domain A6E01_02965 PF00005 ABC transporter A6E01_02970 PF16875 Glycosyl hydrolase family 36 N-terminal domain A6E01_02970 PF16874 Glycosyl hydrolase family 36 C-terminal domain A6E01_02975 PF01554 MatE A6E01_02985 PF01263 Aldose 1-epimerase A6E01_02990 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_02995 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_03005 PF00356 Bacterial regulatory proteins, lacI family A6E01_03010 PF00375 Sodium:dicarboxylate symporter family A6E01_03015 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle A6E01_03015 PF14602 Hexapeptide repeat of succinyl-transferase A6E01_03020 PF07130 YebG protein A6E01_03025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_03025 PF03466 LysR substrate binding domain A6E01_03035 PF17946 RecC C-terminal domain A6E01_03040 PF12705 PD-(D/E)XK nuclease superfamily A6E01_03040 PF00580 UvrD/REP helicase N-terminal domain A6E01_03040 PF13361 UvrD-like helicase C-terminal domain A6E01_03045 PF13538 UvrD-like helicase C-terminal domain A6E01_03050 PF00696 Amino acid kinase family A6E01_03050 PF00583 Acetyltransferase (GNAT) family A6E01_03055 PF06725 3D domain A6E01_03055 PF03562 MltA specific insert domain A6E01_03060 PF00899 ThiF family A6E01_03065 PF02657 Fe-S metabolism associated domain A6E01_03070 PF00266 Aminotransferase class-V A6E01_03075 PF01965 DJ-1/PfpI family A6E01_03080 PF08546 Ketopantoate reductase PanE/ApbA C terminal A6E01_03080 PF02558 Ketopantoate reductase PanE/ApbA A6E01_03085 PF03502 Nucleoside-specific channel-forming protein, Tsx A6E01_03095 PF02469 Fasciclin domain A6E01_03105 PF04542 Sigma-70 region 2 A6E01_03105 PF04545 Sigma-70, region 4 A6E01_03115 PF07690 Major Facilitator Superfamily A6E01_03120 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD A6E01_03130 PF05175 Methyltransferase small domain A6E01_03135 PF01722 BolA-like protein A6E01_03145 PF03116 NQR2, RnfD, RnfE family A6E01_03150 PF04205 FMN-binding domain A6E01_03155 PF02508 Rnf-Nqr subunit, membrane protein A6E01_03160 PF02508 Rnf-Nqr subunit, membrane protein A6E01_03165 PF00111 2Fe-2S iron-sulfur cluster binding domain A6E01_03165 PF00970 Oxidoreductase FAD-binding domain A6E01_03165 PF00175 Oxidoreductase NAD-binding domain A6E01_03170 PF02424 ApbE family A6E01_03175 PF04400 (Na+)-NQR maturation NqrM A6E01_03180 PF00860 Permease family A6E01_03185 PF11799 impB/mucB/samB family C-terminal domain A6E01_03185 PF00817 impB/mucB/samB family A6E01_03195 PF00313 'Cold-shock' DNA-binding domain A6E01_03210 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A6E01_03210 PF03129 Anticodon binding domain A6E01_03210 PF04073 Aminoacyl-tRNA editing domain A6E01_03215 PF18389 TrmO C-terminal domain A6E01_03215 PF01980 tRNA-methyltransferase O A6E01_03220 PF03806 AbgT putative transporter family A6E01_03225 PF03180 NLPA lipoprotein A6E01_03230 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_03235 PF09383 NIL domain A6E01_03235 PF00005 ABC transporter A6E01_03245 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 A6E01_03245 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) A6E01_03250 PF00464 Serine hydroxymethyltransferase A6E01_03255 PF01863 Protein of unknown function DUF45 A6E01_03265 PF01548 Transposase A6E01_03265 PF02371 Transposase IS116/IS110/IS902 family A6E01_03270 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family A6E01_03270 PF04055 Radical SAM superfamily A6E01_03275 PF03099 Biotin/lipoate A/B protein ligase family A6E01_03280 PF04359 Protein of unknown function (DUF493) A6E01_03285 PF07943 Penicillin-binding protein 5, C-terminal domain A6E01_03285 PF00768 D-alanyl-D-alanine carboxypeptidase A6E01_03290 PF03330 Lytic transglycolase A6E01_03290 PF05036 Sporulation related domain A6E01_03295 PF01098 Cell cycle protein A6E01_03300 PF00905 Penicillin binding protein transpeptidase domain A6E01_03300 PF03717 Penicillin-binding Protein dimerisation domain A6E01_03315 PF14840 Processivity clamp loader gamma complex DNA pol III C-term A6E01_03315 PF06144 DNA polymerase III, delta subunit A6E01_03320 PF04390 Lipopolysaccharide-assembly A6E01_03325 PF08264 Anticodon-binding domain of tRNA A6E01_03325 PF00133 tRNA synthetases class I (I, L, M and V) A6E01_03325 PF13603 Leucyl-tRNA synthetase, Domain 2 A6E01_03330 PF07295 Zinc-ribbon containing domain A6E01_03340 PF00795 Carbon-nitrogen hydrolase A6E01_03345 PF03471 Transporter associated domain A6E01_03345 PF00571 CBS domain A6E01_03350 PF02130 Uncharacterized protein family UPF0054 A6E01_03355 PF02562 PhoH-like protein A6E01_03360 PF01938 TRAM domain A6E01_03360 PF04055 Radical SAM superfamily A6E01_03360 PF00919 Uncharacterized protein family UPF0004 A6E01_03365 PF01494 FAD binding domain A6E01_03445 PF01926 50S ribosome-binding GTPase A6E01_03445 PF06071 Protein of unknown function (DUF933) A6E01_03455 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase A6E01_03455 PF14572 Phosphoribosyl synthetase-associated domain A6E01_03460 PF00288 GHMP kinases N terminal domain A6E01_03460 PF08544 GHMP kinases C terminal A6E01_03465 PF03550 Outer membrane lipoprotein LolB A6E01_03470 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain A6E01_03470 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain A6E01_03470 PF01488 Shikimate / quinate 5-dehydrogenase A6E01_03480 PF13847 Methyltransferase domain A6E01_03480 PF17827 PrmC N-terminal domain A6E01_03490 PF13369 Transglutaminase-like superfamily A6E01_03495 PF00793 DAHP synthetase I family A6E01_03500 PF00149 Calcineurin-like phosphoesterase A6E01_03500 PF02872 5'-nucleotidase, C-terminal domain A6E01_03505 PF04073 Aminoacyl-tRNA editing domain A6E01_03510 PF01810 LysE type translocator A6E01_03515 PF01037 Lrp/AsnC ligand binding domain A6E01_03520 PF00849 RNA pseudouridylate synthase A6E01_03520 PF01479 S4 domain A6E01_03525 PF01713 Smr domain A6E01_03560 PF00196 Bacterial regulatory proteins, luxR family A6E01_03575 PF00132 Bacterial transferase hexapeptide (six repeats) A6E01_03580 PF16363 GDP-mannose 4,6 dehydratase A6E01_03585 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain A6E01_03585 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain A6E01_03590 PF00288 GHMP kinases N terminal domain A6E01_03590 PF08544 GHMP kinases C terminal A6E01_03590 PF10509 Galactokinase galactose-binding signature A6E01_03600 PF00356 Bacterial regulatory proteins, lacI family A6E01_03605 PF16875 Glycosyl hydrolase family 36 N-terminal domain A6E01_03605 PF16874 Glycosyl hydrolase family 36 C-terminal domain A6E01_03610 PF00474 Sodium:solute symporter family A6E01_03615 PF00728 Glycosyl hydrolase family 20, catalytic domain A6E01_03615 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain A6E01_03615 PF02838 Glycosyl hydrolase family 20, domain 2 A6E01_03615 PF03173 Putative carbohydrate binding domain A6E01_03620 PF13609 Gram-negative porin A6E01_03625 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) A6E01_03645 PF00749 tRNA synthetases class I (E and Q), catalytic domain A6E01_03650 PF00512 His Kinase A (phospho-acceptor) domain A6E01_03650 PF01627 Hpt domain A6E01_03650 PF00072 Response regulator receiver domain A6E01_03650 PF00672 HAMP domain A6E01_03650 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) A6E01_03650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6E01_03655 PF00072 Response regulator receiver domain A6E01_03660 PF00563 EAL domain A6E01_03660 PF00990 Diguanylate cyclase, GGDEF domain A6E01_03660 PF03707 Bacterial signalling protein N terminal repeat A6E01_03665 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A6E01_03665 PF05698 Bacterial trigger factor protein (TF) C-terminus A6E01_03665 PF05697 Bacterial trigger factor protein (TF) A6E01_03670 PF00574 Clp protease A6E01_03680 PF02190 ATP-dependent protease La (LON) substrate-binding domain A6E01_03680 PF05362 Lon protease (S16) C-terminal proteolytic domain A6E01_03680 PF00004 ATPase family associated with various cellular activities (AAA) A6E01_03685 PF00216 Bacterial DNA-binding protein A6E01_03690 PF13145 PPIC-type PPIASE domain A6E01_03710 PF01966 HD domain A6E01_03710 PF13286 Phosphohydrolase-associated domain A6E01_03720 PF00155 Aminotransferase class I and II A6E01_03725 PF00425 chorismate binding enzyme A6E01_03730 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A6E01_03730 PF16582 Middle domain of thiamine pyrophosphate A6E01_03730 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A6E01_03735 PF00561 alpha/beta hydrolase fold A6E01_03740 PF13378 Enolase C-terminal domain-like A6E01_03745 PF13193 AMP-binding enzyme C-terminal domain A6E01_03745 PF00501 AMP-binding enzyme A6E01_03755 PF03601 Conserved hypothetical protein 698 A6E01_03770 PF01515 Phosphate acetyl/butaryl transferase A6E01_03770 PF07085 DRTGG domain A6E01_03775 PF00871 Acetokinase family A6E01_03780 PF04217 Protein of unknown function, DUF412 A6E01_03790 PF02653 Branched-chain amino acid transport system / permease component A6E01_03795 PF00005 ABC transporter A6E01_03800 PF00128 Alpha amylase, catalytic domain A6E01_03800 PF02903 Alpha amylase, N-terminal ig-like domain A6E01_03805 PF01207 Dihydrouridine synthase (Dus) A6E01_03810 PF02810 SEC-C motif A6E01_03810 PF07517 SecA DEAD-like domain A6E01_03810 PF07516 SecA Wing and Scaffold domain A6E01_03810 PF01043 SecA preprotein cross-linking domain A6E01_03815 PF02600 Disulfide bond formation protein DsbB A6E01_03820 PF06450 Bacterial Na+/H+ antiporter B (NhaB) A6E01_03825 PF07840 FadR C-terminal domain A6E01_03825 PF00392 Bacterial regulatory proteins, gntR family A6E01_03840 PF02811 PHP domain A6E01_03840 PF01336 OB-fold nucleic acid binding domain A6E01_03840 PF14579 Helix-hairpin-helix motif A6E01_03840 PF17657 Bacterial DNA polymerase III alpha subunit finger domain A6E01_03840 PF07733 Bacterial DNA polymerase III alpha NTPase domain A6E01_03865 PF03707 Bacterial signalling protein N terminal repeat A6E01_03865 PF00563 EAL domain A6E01_03865 PF00990 Diguanylate cyclase, GGDEF domain A6E01_03870 PF01464 Transglycosylase SLT domain A6E01_03870 PF00497 Bacterial extracellular solute-binding proteins, family 3 A6E01_03875 PF00266 Aminotransferase class-V A6E01_03885 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain A6E01_03885 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase A6E01_03890 PF03466 LysR substrate binding domain A6E01_03890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_03895 PF04055 Radical SAM superfamily A6E01_03895 PF01938 TRAM domain A6E01_03895 PF00919 Uncharacterized protein family UPF0004 A6E01_03900 PF08543 Phosphomethylpyrimidine kinase A6E01_03915 PF03466 LysR substrate binding domain A6E01_03915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_03960 PF01177 Asp/Glu/Hydantoin racemase A6E01_03970 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin A6E01_03980 PF07690 Major Facilitator Superfamily A6E01_03985 PF03466 LysR substrate binding domain A6E01_03985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_03990 PF00665 Integrase core domain A6E01_03990 PF13276 HTH-like domain A6E01_03990 PF13333 Integrase core domain A6E01_03995 PF01527 Transposase A6E01_04000 PF07943 Penicillin-binding protein 5, C-terminal domain A6E01_04000 PF00768 D-alanyl-D-alanine carboxypeptidase A6E01_04010 PF01609 Transposase DDE domain A6E01_04010 PF13808 DDE_Tnp_1-associated A6E01_04030 PF11893 Domain of unknown function (DUF3413) A6E01_04030 PF00884 Sulfatase A6E01_04035 PF07208 Protein of unknown function (DUF1414) A6E01_04045 PF02774 Semialdehyde dehydrogenase, dimerisation domain A6E01_04045 PF01118 Semialdehyde dehydrogenase, NAD binding domain A6E01_04055 PF00027 Cyclic nucleotide-binding domain A6E01_04055 PF00520 Ion transport protein A6E01_04060 PF01914 MarC family integral membrane protein A6E01_04065 PF00465 Iron-containing alcohol dehydrogenase A6E01_04065 PF00171 Aldehyde dehydrogenase family A6E01_04075 PF13276 HTH-like domain A6E01_04075 PF00665 Integrase core domain A6E01_04075 PF13333 Integrase core domain A6E01_04095 PF02777 Iron/manganese superoxide dismutases, C-terminal domain A6E01_04095 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain A6E01_04100 PF00462 Glutaredoxin A6E01_04105 PF03553 Na+/H+ antiporter family A6E01_04105 PF13726 Na+-H+ antiporter family A6E01_04110 PF00929 Exonuclease A6E01_04115 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A6E01_04120 PF10576 Iron-sulfur binding domain of endonuclease III A6E01_04120 PF00730 HhH-GPD superfamily base excision DNA repair protein A6E01_04120 PF00633 Helix-hairpin-helix motif A6E01_04125 PF02508 Rnf-Nqr subunit, membrane protein A6E01_04135 PF03116 NQR2, RnfD, RnfE family A6E01_04140 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit A6E01_04140 PF12838 4Fe-4S dicluster domain A6E01_04140 PF13375 RnfC Barrel sandwich hybrid domain A6E01_04140 PF10531 SLBB domain A6E01_04145 PF04060 Putative Fe-S cluster A6E01_04150 PF02508 Rnf-Nqr subunit, membrane protein A6E01_04160 PF00271 Helicase conserved C-terminal domain A6E01_04160 PF04851 Type III restriction enzyme, res subunit A6E01_04160 PF17757 UvrB interaction domain A6E01_04160 PF12344 Ultra-violet resistance protein B A6E01_04160 PF02151 UvrB/uvrC motif A6E01_04165 PF00158 Sigma-54 interaction domain A6E01_04165 PF00072 Response regulator receiver domain A6E01_04165 PF02954 Bacterial regulatory protein, Fis family A6E01_04170 PF01627 Hpt domain A6E01_04175 PF01933 Uncharacterised protein family UPF0052 A6E01_04180 PF04055 Radical SAM superfamily A6E01_04180 PF06463 Molybdenum Cofactor Synthesis C A6E01_04185 PF00994 Probable molybdopterin binding domain A6E01_04190 PF01967 MoaC family A6E01_04195 PF02597 ThiS family A6E01_04200 PF02391 MoaE protein A6E01_04205 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A6E01_04210 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_04215 PF12911 N-terminal TM domain of oligopeptide transport permease C A6E01_04215 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_04220 PF00005 ABC transporter A6E01_04220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A6E01_04225 PF00005 ABC transporter A6E01_04225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A6E01_04230 PF13409 Glutathione S-transferase, N-terminal domain A6E01_04260 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A6E01_04265 PF00873 AcrB/AcrD/AcrF family A6E01_04270 PF06029 AlkA N-terminal domain A6E01_04270 PF00730 HhH-GPD superfamily base excision DNA repair protein A6E01_04285 PF18081 Fanconi anemia-associated nuclease SAP domain A6E01_04285 PF08774 VRR-NUC domain A6E01_04290 PF00291 Pyridoxal-phosphate dependent enzyme A6E01_04295 PF13404 AsnC-type helix-turn-helix domain A6E01_04295 PF01037 Lrp/AsnC ligand binding domain A6E01_04300 PF00474 Sodium:solute symporter family A6E01_04310 PF09619 Type III secretion system lipoprotein chaperone (YscW) A6E01_04315 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain A6E01_04355 PF00005 ABC transporter A6E01_04355 PF17912 MalK OB fold domain A6E01_04360 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain A6E01_04365 PF00356 Bacterial regulatory proteins, lacI family A6E01_04370 PF13416 Bacterial extracellular solute-binding protein A6E01_04375 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_04380 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_04390 PF14310 Fibronectin type III-like domain A6E01_04390 PF00933 Glycosyl hydrolase family 3 N terminal domain A6E01_04390 PF01915 Glycosyl hydrolase family 3 C-terminal domain A6E01_04400 PF00529 HlyD membrane-fusion protein of T1SS A6E01_04400 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A6E01_04420 PF02028 BCCT, betaine/carnitine/choline family transporter A6E01_04425 PF03222 Tryptophan/tyrosine permease family A6E01_04435 PF01476 LysM domain A6E01_04435 PF01551 Peptidase family M23 A6E01_04435 PF08525 Opacity-associated protein A N-terminal motif A6E01_04440 PF07690 Major Facilitator Superfamily A6E01_04445 PF03741 Integral membrane protein TerC family A6E01_04450 PF01979 Amidohydrolase family A6E01_04455 PF00916 Sulfate permease family A6E01_04455 PF01740 STAS domain A6E01_04460 PF00582 Universal stress protein family A6E01_04485 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) A6E01_04510 PF00356 Bacterial regulatory proteins, lacI family A6E01_04515 PF00722 Glycosyl hydrolases family 16 A6E01_04520 PF00356 Bacterial regulatory proteins, lacI family A6E01_04525 PF03764 Elongation factor G, domain IV A6E01_04525 PF00009 Elongation factor Tu GTP binding domain A6E01_04525 PF14492 Elongation Factor G, domain II A6E01_04525 PF00679 Elongation factor G C-terminus A6E01_04525 PF03144 Elongation factor Tu domain 2 A6E01_04530 PF01475 Ferric uptake regulator family A6E01_04535 PF02798 Glutathione S-transferase, N-terminal domain A6E01_04540 PF01609 Transposase DDE domain A6E01_04540 PF13808 DDE_Tnp_1-associated A6E01_04570 PF14310 Fibronectin type III-like domain A6E01_04570 PF00933 Glycosyl hydrolase family 3 N terminal domain A6E01_04570 PF01915 Glycosyl hydrolase family 3 C-terminal domain A6E01_04585 PF16326 ABC transporter C-terminal domain A6E01_04585 PF00005 ABC transporter A6E01_04585 PF12848 ABC transporter A6E01_04590 PF03264 NapC/NirT cytochrome c family, N-terminal region A6E01_04595 PF01568 Molydopterin dinucleotide binding domain A6E01_04595 PF18364 Molybdopterin oxidoreductase N-terminal domain A6E01_04595 PF00384 Molybdopterin oxidoreductase A6E01_04610 PF03466 LysR substrate binding domain A6E01_04610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_04615 PF07690 Major Facilitator Superfamily A6E01_04620 PF00144 Beta-lactamase A6E01_04625 PF03458 UPF0126 domain A6E01_04630 PF00912 Transglycosylase A6E01_04630 PF00905 Penicillin binding protein transpeptidase domain A6E01_04630 PF14814 Bifunctional transglycosylase second domain A6E01_04640 PF02028 BCCT, betaine/carnitine/choline family transporter A6E01_04660 PF03466 LysR substrate binding domain A6E01_04660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_04665 PF03788 LrgA family A6E01_04670 PF04172 LrgB-like family A6E01_04680 PF12833 Helix-turn-helix domain A6E01_04680 PF02311 AraC-like ligand binding domain A6E01_04690 PF01609 Transposase DDE domain A6E01_04690 PF13808 DDE_Tnp_1-associated A6E01_04695 PF13520 Amino acid permease A6E01_04720 PF17912 MalK OB fold domain A6E01_04720 PF00005 ABC transporter A6E01_04725 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_04730 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_04735 PF13416 Bacterial extracellular solute-binding protein A6E01_04740 PF03009 Glycerophosphoryl diester phosphodiesterase family A6E01_04745 PF00455 DeoR C terminal sensor domain A6E01_04745 PF08220 DeoR-like helix-turn-helix domain A6E01_04755 PF01554 MatE A6E01_04760 PF00005 ABC transporter A6E01_04760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A6E01_04765 PF00005 ABC transporter A6E01_04770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A6E01_04775 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_04775 PF12911 N-terminal TM domain of oligopeptide transport permease C A6E01_04780 PF00356 Bacterial regulatory proteins, lacI family A6E01_04785 PF13378 Enolase C-terminal domain-like A6E01_04785 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain A6E01_04795 PF01717 Cobalamin-independent synthase, Catalytic domain A6E01_04795 PF08267 Cobalamin-independent synthase, N-terminal domain A6E01_04800 PF01568 Molydopterin dinucleotide binding domain A6E01_04800 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A6E01_04800 PF12838 4Fe-4S dicluster domain A6E01_04800 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region A6E01_04800 PF00384 Molybdopterin oxidoreductase A6E01_04805 PF00144 Beta-lactamase A6E01_04815 PF04244 Deoxyribodipyrimidine photo-lyase-related protein A6E01_04825 PF09339 IclR helix-turn-helix domain A6E01_04825 PF01614 Bacterial transcriptional regulator A6E01_04830 PF10688 Bacterial inner membrane protein A6E01_04840 PF03239 Iron permease FTR1 family A6E01_04845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_04845 PF03466 LysR substrate binding domain A6E01_04850 PF01553 Acyltransferase A6E01_04855 PF14602 Hexapeptide repeat of succinyl-transferase A6E01_04855 PF12464 Maltose acetyltransferase A6E01_04860 PF07690 Major Facilitator Superfamily A6E01_04865 PF16736 Single Cache-like A6E01_04865 PF00989 PAS fold A6E01_04865 PF00512 His Kinase A (phospho-acceptor) domain A6E01_04865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6E01_04870 PF00072 Response regulator receiver domain A6E01_04870 PF00486 Transcriptional regulatory protein, C terminal A6E01_04880 PF00378 Enoyl-CoA hydratase/isomerase A6E01_04885 PF01435 Peptidase family M48 A6E01_04895 PF00005 ABC transporter A6E01_04900 PF01032 FecCD transport family A6E01_04905 PF01032 FecCD transport family A6E01_04910 PF01497 Periplasmic binding protein A6E01_04915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_04915 PF03466 LysR substrate binding domain A6E01_04920 PF00593 TonB dependent receptor A6E01_04920 PF07715 TonB-dependent Receptor Plug Domain A6E01_04930 PF00529 HlyD membrane-fusion protein of T1SS A6E01_04930 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A6E01_04945 PF00392 Bacterial regulatory proteins, gntR family A6E01_04945 PF07085 DRTGG domain A6E01_04945 PF03061 Thioesterase superfamily A6E01_04945 PF00571 CBS domain A6E01_04950 PF01048 Phosphorylase superfamily A6E01_04960 PF01230 HIT domain A6E01_04975 PF13036 Peptidoglycan-synthase activator LpoB A6E01_04975 PF08139 Prokaryotic membrane lipoprotein lipid attachment site A6E01_04985 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6E01_04995 PF00270 DEAD/DEAH box helicase A6E01_04995 PF00271 Helicase conserved C-terminal domain A6E01_04995 PF02559 CarD-like/TRCF domain A6E01_04995 PF17757 UvrB interaction domain A6E01_04995 PF03461 TRCF domain A6E01_05000 PF12704 MacB-like periplasmic core domain A6E01_05000 PF02687 FtsX-like permease family A6E01_05005 PF00005 ABC transporter A6E01_05010 PF02687 FtsX-like permease family A6E01_05010 PF12704 MacB-like periplasmic core domain A6E01_05020 PF03772 Competence protein A6E01_05020 PF13567 Domain of unknown function (DUF4131) A6E01_05020 PF00753 Metallo-beta-lactamase superfamily A6E01_05025 PF00005 ABC transporter A6E01_05025 PF00664 ABC transporter transmembrane region A6E01_05030 PF02606 Tetraacyldisaccharide-1-P 4'-kinase A6E01_05040 PF02348 Cytidylyltransferase A6E01_05045 PF04293 SpoVR like protein A6E01_05050 PF04285 Protein of unknown function (DUF444) A6E01_05055 PF08298 PrkA AAA domain A6E01_05055 PF06798 PrkA serine protein kinase C-terminal domain A6E01_05065 PF03887 YfbU domain A6E01_05070 PF04055 Radical SAM superfamily A6E01_05080 PF01228 Glycine radical A6E01_05080 PF02901 Pyruvate formate lyase-like A6E01_05090 PF00005 ABC transporter A6E01_05095 PF00497 Bacterial extracellular solute-binding proteins, family 3 A6E01_05100 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_05105 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_05110 PF03372 Endonuclease/Exonuclease/phosphatase family A6E01_05115 PF10689 Protein of unknown function (DUF2496) A6E01_05125 PF01925 Sulfite exporter TauE/SafE A6E01_05130 PF06733 DEAD_2 A6E01_05130 PF13307 Helicase C-terminal domain A6E01_05135 PF13609 Gram-negative porin A6E01_05140 PF08323 Starch synthase catalytic domain A6E01_05140 PF00534 Glycosyl transferases group 1 A6E01_05145 PF00206 Lyase A6E01_05145 PF08328 Adenylosuccinate lyase C-terminal A6E01_05165 PF00849 RNA pseudouridylate synthase A6E01_05170 PF03971 Monomeric isocitrate dehydrogenase A6E01_05175 PF13520 Amino acid permease A6E01_05190 PF00881 Nitroreductase family A6E01_05200 PF00313 'Cold-shock' DNA-binding domain A6E01_05205 PF02617 ATP-dependent Clp protease adaptor protein ClpS A6E01_05210 PF02861 Clp amino terminal domain, pathogenicity island component A6E01_05210 PF00004 ATPase family associated with various cellular activities (AAA) A6E01_05210 PF07724 AAA domain (Cdc48 subfamily) A6E01_05210 PF10431 C-terminal, D2-small domain, of ClpB protein A6E01_05210 PF17871 AAA lid domain A6E01_05215 PF01176 Translation initiation factor 1A / IF-1 A6E01_05220 PF04377 Arginine-tRNA-protein transferase, C terminus A6E01_05220 PF04376 Arginine-tRNA-protein transferase, N terminus A6E01_05230 PF05433 Glycine zipper 2TM domain A6E01_05240 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase A6E01_05245 PF10692 Protein of unknown function (DUF2498) A6E01_05250 PF08272 Topoisomerase I zinc-ribbon-like A6E01_05250 PF01751 Toprim domain A6E01_05250 PF01131 DNA topoisomerase A6E01_05250 PF01396 Topoisomerase DNA binding C4 zinc finger A6E01_05255 PF00294 pfkB family carbohydrate kinase A6E01_05260 PF00816 H-NS histone family A6E01_05265 PF03553 Na+/H+ antiporter family A6E01_05270 PF01634 ATP phosphoribosyltransferase A6E01_05270 PF08029 HisG, C-terminal domain A6E01_05275 PF00815 Histidinol dehydrogenase A6E01_05280 PF00155 Aminotransferase class I and II A6E01_05285 PF00475 Imidazoleglycerol-phosphate dehydratase A6E01_05285 PF08645 Polynucleotide kinase 3 phosphatase A6E01_05290 PF00117 Glutamine amidotransferase class-I A6E01_05295 PF00977 Histidine biosynthesis protein A6E01_05305 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase A6E01_05305 PF01502 Phosphoribosyl-AMP cyclohydrolase A6E01_05310 PF02810 SEC-C motif A6E01_05315 PF08668 HDOD domain A6E01_05315 PF00563 EAL domain A6E01_05320 PF00149 Calcineurin-like phosphoesterase A6E01_05325 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD A6E01_05330 PF01406 tRNA synthetases class I (C) catalytic domain A6E01_05330 PF09190 DALR domain A6E01_05335 PF00265 Thymidine kinase A6E01_05340 PF18030 RimK PreATP-grasp domain A6E01_05340 PF08443 RimK-like ATP-grasp domain A6E01_05350 PF08443 RimK-like ATP-grasp domain A6E01_05350 PF18030 RimK PreATP-grasp domain A6E01_05355 PF08003 Protein of unknown function (DUF1698) A6E01_05360 PF02833 DHHA2 domain A6E01_05360 PF01368 DHH family A6E01_05365 PF00005 ABC transporter A6E01_05370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A6E01_05370 PF00005 ABC transporter A6E01_05375 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_05375 PF12911 N-terminal TM domain of oligopeptide transport permease C A6E01_05380 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_05385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A6E01_05390 PF00158 Sigma-54 interaction domain A6E01_05390 PF02954 Bacterial regulatory protein, Fis family A6E01_05395 PF04012 PspA/IM30 family A6E01_05400 PF06667 Phage shock protein B A6E01_05415 PF00854 POT family A6E01_05430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A6E01_05435 PF00873 AcrB/AcrD/AcrF family A6E01_05445 PF00665 Integrase core domain A6E01_05450 PF01527 Transposase A6E01_05460 PF00117 Glutamine amidotransferase class-I A6E01_05460 PF00958 GMP synthase C terminal domain A6E01_05460 PF13673 Acetyltransferase (GNAT) domain A6E01_05460 PF13302 Acetyltransferase (GNAT) domain A6E01_05460 PF03352 Methyladenine glycosylase A6E01_05470 PF03605 Anaerobic c4-dicarboxylate membrane transporter A6E01_05475 PF01590 GAF domain A6E01_05475 PF00158 Sigma-54 interaction domain A6E01_05480 PF00175 Oxidoreductase NAD-binding domain A6E01_05480 PF00970 Oxidoreductase FAD-binding domain A6E01_05505 PF09905 DNA-binding protein VF530 A6E01_05530 PF08007 Cupin superfamily protein A6E01_05540 PF01053 Cys/Met metabolism PLP-dependent enzyme A6E01_05545 PF13396 Phospholipase_D-nuclease N-terminal A6E01_05545 PF13091 PLD-like domain A6E01_05550 PF00849 RNA pseudouridylate synthase A6E01_05555 PF17785 PUA-like domain A6E01_05555 PF10672 S-adenosylmethionine-dependent methyltransferase A6E01_05565 PF03795 YCII-related domain A6E01_05570 PF03061 Thioesterase superfamily A6E01_05575 PF04279 Intracellular septation protein A A6E01_05600 PF00106 short chain dehydrogenase A6E01_05615 PF00375 Sodium:dicarboxylate symporter family A6E01_05625 PF00291 Pyridoxal-phosphate dependent enzyme A6E01_05630 PF00218 Indole-3-glycerol phosphate synthase A6E01_05630 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase A6E01_05635 PF02885 Glycosyl transferase family, helical bundle domain A6E01_05635 PF00591 Glycosyl transferase family, a/b domain A6E01_05640 PF00117 Glutamine amidotransferase class-I A6E01_05645 PF00425 chorismate binding enzyme A6E01_05645 PF04715 Anthranilate synthase component I, N terminal region A6E01_05650 PF02811 PHP domain A6E01_05655 PF01300 Telomere recombination A6E01_05660 PF00849 RNA pseudouridylate synthase A6E01_05660 PF01479 S4 domain A6E01_05665 PF00085 Thioredoxin A6E01_05680 PF03358 NADPH-dependent FMN reductase A6E01_05700 PF02567 Phenazine biosynthesis-like protein A6E01_05705 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A6E01_05705 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A6E01_05720 PF01784 NIF3 (NGG1p interacting factor 3) A6E01_05725 PF04219 Protein of unknown function, DUF A6E01_05735 PF00664 ABC transporter transmembrane region A6E01_05735 PF00005 ABC transporter A6E01_05755 PF13411 MerR HTH family regulatory protein A6E01_05765 PF13533 Biotin-lipoyl like A6E01_05770 PF00873 AcrB/AcrD/AcrF family A6E01_05775 PF04269 Protein of unknown function, DUF440 A6E01_05780 PF00136 DNA polymerase family B A6E01_05780 PF03104 DNA polymerase family B, exonuclease domain A6E01_05785 PF00072 Response regulator receiver domain A6E01_05785 PF00196 Bacterial regulatory proteins, luxR family A6E01_05790 PF08459 UvrC Helix-hairpin-helix N-terminal A6E01_05790 PF01541 GIY-YIG catalytic domain A6E01_05790 PF02151 UvrB/uvrC motif A6E01_05795 PF01066 CDP-alcohol phosphatidyltransferase A6E01_05845 PF00202 Aminotransferase class-III A6E01_05850 PF03435 Saccharopine dehydrogenase NADP binding domain A6E01_05850 PF16653 Saccharopine dehydrogenase C-terminal domain A6E01_05855 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain A6E01_05865 PF12833 Helix-turn-helix domain A6E01_05875 PF00884 Sulfatase A6E01_05885 PF07055 Enoyl reductase FAD binding domain A6E01_05885 PF12241 Trans-2-enoyl-CoA reductase catalytic region A6E01_05885 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase A6E01_05890 PF00795 Carbon-nitrogen hydrolase A6E01_05900 PF06826 Predicted Permease Membrane Region A6E01_05910 PF13333 Integrase core domain A6E01_05910 PF00665 Integrase core domain A6E01_05910 PF13276 HTH-like domain A6E01_05920 PF01527 Transposase A6E01_05935 PF01259 SAICAR synthetase A6E01_05955 PF01565 FAD binding domain A6E01_05955 PF02913 FAD linked oxidases, C-terminal domain A6E01_05955 PF13183 4Fe-4S dicluster domain A6E01_05975 PF08534 Redoxin A6E01_05995 PF13419 Haloacid dehalogenase-like hydrolase A6E01_06000 PF02056 Family 4 glycosyl hydrolase A6E01_06000 PF11975 Family 4 glycosyl hydrolase C-terminal domain A6E01_06005 PF03466 LysR substrate binding domain A6E01_06005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_06015 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain A6E01_06015 PF03129 Anticodon binding domain A6E01_06015 PF02824 TGS domain A6E01_06015 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A6E01_06020 PF05198 Translation initiation factor IF-3, N-terminal domain A6E01_06020 PF00707 Translation initiation factor IF-3, C-terminal domain A6E01_06035 PF03466 LysR substrate binding domain A6E01_06035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_06045 PF00581 Rhodanese-like domain A6E01_06055 PF07995 Glucose / Sorbosone dehydrogenase A6E01_06075 PF03483 B3/4 domain A6E01_06075 PF03484 tRNA synthetase B5 domain A6E01_06075 PF03147 Ferredoxin-fold anticodon binding domain A6E01_06075 PF01588 Putative tRNA binding domain A6E01_06075 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain A6E01_06080 PF00271 Helicase conserved C-terminal domain A6E01_06080 PF00270 DEAD/DEAH box helicase A6E01_06085 PF09962 Uncharacterized conserved protein (DUF2196) A6E01_06095 PF03793 PASTA domain A6E01_06095 PF00069 Protein kinase domain A6E01_06115 PF13495 Phage integrase, N-terminal SAM-like domain A6E01_06115 PF00589 Phage integrase family A6E01_06120 PF00583 Acetyltransferase (GNAT) family A6E01_06150 PF01613 Flavin reductase like domain A6E01_06155 PF02567 Phenazine biosynthesis-like protein A6E01_06165 PF00849 RNA pseudouridylate synthase A6E01_06165 PF01479 S4 domain A6E01_06180 PF17967 Pullulanase N2 domain A6E01_06180 PF18494 Pullulanase Ins domain A6E01_06180 PF03714 Bacterial pullanase-associated domain A6E01_06180 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) A6E01_06180 PF11852 Domain of unknown function (DUF3372) A6E01_06185 PF00216 Bacterial DNA-binding protein A6E01_06190 PF02222 ATP-grasp domain A6E01_06200 PF04172 LrgB-like family A6E01_06205 PF03788 LrgA family A6E01_06210 PF00929 Exonuclease A6E01_06210 PF08411 Exonuclease C-terminal A6E01_06230 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family A6E01_06240 PF00483 Nucleotidyl transferase A6E01_06245 PF01554 MatE A6E01_06265 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A6E01_06270 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region A6E01_06280 PF00962 Adenosine/AMP deaminase A6E01_06295 PF02646 RmuC family A6E01_06300 PF00436 Single-strand binding protein family A6E01_06320 PF12320 Type 5 capsule protein repressor C-terminal domain A6E01_06320 PF00149 Calcineurin-like phosphoesterase A6E01_06325 PF13476 AAA domain A6E01_06360 PF12833 Helix-turn-helix domain A6E01_06360 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term A6E01_06365 PF01979 Amidohydrolase family A6E01_06395 PF13417 Glutathione S-transferase, N-terminal domain A6E01_06405 PF07690 Major Facilitator Superfamily A6E01_06410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_06410 PF03466 LysR substrate binding domain A6E01_06425 PF03466 LysR substrate binding domain A6E01_06425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_06430 PF14743 DNA ligase OB-like domain A6E01_06430 PF01068 ATP dependent DNA ligase domain A6E01_06435 PF01554 MatE A6E01_06440 PF00677 Lumazine binding domain A6E01_06455 PF00877 NlpC/P60 family A6E01_06470 PF00480 ROK family A6E01_06495 PF02146 Sir2 family A6E01_06515 PF01171 PP-loop family A6E01_06520 PF00582 Universal stress protein family A6E01_06525 PF13545 Crp-like helix-turn-helix domain A6E01_06525 PF00027 Cyclic nucleotide-binding domain A6E01_06535 PF00403 Heavy-metal-associated domain A6E01_06545 PF13442 Cytochrome C oxidase, cbb3-type, subunit III A6E01_06545 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP A6E01_06560 PF00115 Cytochrome C and Quinol oxidase polypeptide I A6E01_06570 PF07690 Major Facilitator Superfamily A6E01_06590 PF17414 MatP C-terminal ribbon-helix-helix domain A6E01_06590 PF06303 MatP N-terminal domain A6E01_06595 PF05362 Lon protease (S16) C-terminal proteolytic domain A6E01_06595 PF13654 AAA domain A6E01_06600 PF07977 FabA-like domain A6E01_06605 PF04957 Ribosome modulation factor A6E01_06615 PF00005 ABC transporter A6E01_06615 PF12848 ABC transporter A6E01_06615 PF16326 ABC transporter C-terminal domain A6E01_06625 PF01170 Putative RNA methylase family UPF0020 A6E01_06625 PF10672 S-adenosylmethionine-dependent methyltransferase A6E01_06625 PF02926 THUMP domain A6E01_06630 PF07126 Cell-division protein ZapC A6E01_06635 PF01180 Dihydroorotate dehydrogenase A6E01_06640 PF05088 Bacterial NAD-glutamate dehydrogenase A6E01_06655 PF17804 Tail specific protease N-terminal domain A6E01_06655 PF03572 Peptidase family S41 A6E01_06655 PF00595 PDZ domain A6E01_06655 PF11818 C-terminal domain of tail specific protease (DUF3340) A6E01_06660 PF17516 ProQ C-terminal domain A6E01_06660 PF04352 ProQ/FINO family A6E01_06665 PF13185 GAF domain A6E01_06670 PF04403 Paraquat-inducible protein A A6E01_06675 PF02470 MlaD protein A6E01_06680 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF A6E01_06680 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF A6E01_06680 PF01189 16S rRNA methyltransferase RsmB/F A6E01_06690 PF02896 PEP-utilising enzyme, TIM barrel domain A6E01_06690 PF00391 PEP-utilising enzyme, mobile domain A6E01_06690 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain A6E01_06695 PF00793 DAHP synthetase I family A6E01_06705 PF07690 Major Facilitator Superfamily A6E01_06710 PF00085 Thioredoxin A6E01_06715 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A6E01_06715 PF10414 Sirohaem synthase dimerisation region A6E01_06715 PF14824 Sirohaem biosynthesis protein central A6E01_06720 PF00497 Bacterial extracellular solute-binding proteins, family 3 A6E01_06725 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_06730 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_06735 PF00005 ABC transporter A6E01_06740 PF01027 Inhibitor of apoptosis-promoting Bax1 A6E01_06745 PF04358 DsrC like protein A6E01_06750 PF00708 Acylphosphatase A6E01_06755 PF10672 S-adenosylmethionine-dependent methyltransferase A6E01_06755 PF17785 PUA-like domain A6E01_06770 PF00691 OmpA family A6E01_06800 PF01235 Sodium:alanine symporter family A6E01_06805 PF00005 ABC transporter A6E01_06810 PF01032 FecCD transport family A6E01_06825 PF01810 LysE type translocator A6E01_06830 PF02074 Carboxypeptidase Taq (M32) metallopeptidase A6E01_06835 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A6E01_06835 PF00390 Malic enzyme, N-terminal domain A6E01_06835 PF03949 Malic enzyme, NAD binding domain A6E01_06845 PF05230 MASE2 domain A6E01_06845 PF00990 Diguanylate cyclase, GGDEF domain A6E01_06875 PF04976 DMSO reductase anchor subunit (DmsC) A6E01_06880 PF13247 4Fe-4S dicluster domain A6E01_06880 PF12800 4Fe-4S binding domain A6E01_06885 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A6E01_06885 PF00384 Molybdopterin oxidoreductase A6E01_06885 PF01568 Molydopterin dinucleotide binding domain A6E01_06890 PF02613 Nitrate reductase delta subunit A6E01_06905 PF00270 DEAD/DEAH box helicase A6E01_06905 PF11898 Domain of unknown function (DUF3418) A6E01_06905 PF04408 Helicase associated domain (HA2) A6E01_06905 PF00271 Helicase conserved C-terminal domain A6E01_06905 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold A6E01_06940 PF00012 Hsp70 protein A6E01_06945 PF00012 Hsp70 protein A6E01_06950 PF01641 SelR domain A6E01_06950 PF01625 Peptide methionine sulfoxide reductase A6E01_06955 PF00561 alpha/beta hydrolase fold A6E01_06955 PF00364 Biotin-requiring enzyme A6E01_06970 PF13302 Acetyltransferase (GNAT) domain A6E01_06975 PF00158 Sigma-54 interaction domain A6E01_06975 PF18024 Helix-turn-helix domain A6E01_06980 PF05128 Domain of unknown function (DUF697) A6E01_06985 PF04317 YcjX-like family, DUF463 A6E01_07000 PF00425 chorismate binding enzyme A6E01_07000 PF04715 Anthranilate synthase component I, N terminal region A6E01_07005 PF00293 NUDIX domain A6E01_07010 PF00152 tRNA synthetases class II (D, K and N) A6E01_07010 PF01336 OB-fold nucleic acid binding domain A6E01_07015 PF00155 Aminotransferase class I and II A6E01_07030 PF17657 Bacterial DNA polymerase III alpha subunit finger domain A6E01_07030 PF07733 Bacterial DNA polymerase III alpha NTPase domain A6E01_07030 PF14579 Helix-hairpin-helix motif A6E01_07030 PF00929 Exonuclease A6E01_07030 PF02811 PHP domain A6E01_07045 PF02028 BCCT, betaine/carnitine/choline family transporter A6E01_07050 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component A6E01_07060 PF03480 Bacterial extracellular solute-binding protein, family 7 A6E01_07070 PF00753 Metallo-beta-lactamase superfamily A6E01_07075 PF03734 L,D-transpeptidase catalytic domain A6E01_07080 PF00925 GTP cyclohydrolase II A6E01_07085 PF03989 DNA gyrase C-terminal domain, beta-propeller A6E01_07085 PF00521 DNA gyrase/topoisomerase IV, subunit A A6E01_07095 PF00317 Ribonucleotide reductase, all-alpha domain A6E01_07095 PF02867 Ribonucleotide reductase, barrel domain A6E01_07095 PF03477 ATP cone domain A6E01_07100 PF00268 Ribonucleotide reductase, small chain A6E01_07115 PF02464 Competence-damaged protein A6E01_07115 PF00994 Probable molybdopterin binding domain A6E01_07125 PF02770 Acyl-CoA dehydrogenase, middle domain A6E01_07125 PF09317 Domain of unknown function (DUF1974) A6E01_07125 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A6E01_07125 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A6E01_07130 PF00440 Bacterial regulatory proteins, tetR family A6E01_07130 PF17932 Tetracyclin repressor-like, C-terminal domain A6E01_07135 PF06965 Na+/H+ antiporter 1 A6E01_07150 PF00005 ABC transporter A6E01_07155 PF13460 NAD(P)H-binding A6E01_07155 PF11066 Protein of unknown function (DUF2867) A6E01_07165 PF07690 Major Facilitator Superfamily A6E01_07170 PF00849 RNA pseudouridylate synthase A6E01_07170 PF01479 S4 domain A6E01_07175 PF00271 Helicase conserved C-terminal domain A6E01_07175 PF04851 Type III restriction enzyme, res subunit A6E01_07185 PF01979 Amidohydrolase family A6E01_07190 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_07190 PF12911 N-terminal TM domain of oligopeptide transport permease C A6E01_07195 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_07200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A6E01_07205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A6E01_07205 PF00005 ABC transporter A6E01_07210 PF06945 Protein of unknown function (DUF1289) A6E01_07225 PF03949 Malic enzyme, NAD binding domain A6E01_07225 PF00390 Malic enzyme, N-terminal domain A6E01_07230 PF02698 DUF218 domain A6E01_07235 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6E01_07240 PF00005 ABC transporter A6E01_07240 PF00664 ABC transporter transmembrane region A6E01_07245 PF00664 ABC transporter transmembrane region A6E01_07245 PF00005 ABC transporter A6E01_07250 PF08240 Alcohol dehydrogenase GroES-like domain A6E01_07250 PF00107 Zinc-binding dehydrogenase A6E01_07255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_07255 PF03466 LysR substrate binding domain A6E01_07260 PF00266 Aminotransferase class-V A6E01_07270 PF00497 Bacterial extracellular solute-binding proteins, family 3 A6E01_07270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6E01_07270 PF00512 His Kinase A (phospho-acceptor) domain A6E01_07300 PF04055 Radical SAM superfamily A6E01_07300 PF08497 Radical SAM N-terminal A6E01_07300 PF11842 Domain of unknown function (DUF3362) A6E01_07315 PF03441 FAD binding domain of DNA photolyase A6E01_07315 PF00875 DNA photolyase A6E01_07320 PF04055 Radical SAM superfamily A6E01_07320 PF00919 Uncharacterized protein family UPF0004 A6E01_07330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A6E01_07340 PF00529 HlyD membrane-fusion protein of T1SS A6E01_07340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A6E01_07345 PF00873 AcrB/AcrD/AcrF family A6E01_07350 PF00375 Sodium:dicarboxylate symporter family A6E01_07355 PF04993 TfoX N-terminal domain A6E01_07355 PF04994 TfoX C-terminal domain A6E01_07360 PF03956 Lysine exporter LysO A6E01_07370 PF00282 Pyridoxal-dependent decarboxylase conserved domain A6E01_07375 PF01380 SIS domain A6E01_07375 PF01418 Helix-turn-helix domain, rpiR family A6E01_07380 PF00465 Iron-containing alcohol dehydrogenase A6E01_07385 PF00462 Glutaredoxin A6E01_07390 PF00854 POT family A6E01_07405 PF02872 5'-nucleotidase, C-terminal domain A6E01_07405 PF00149 Calcineurin-like phosphoesterase A6E01_07410 PF16177 Acetyl-coenzyme A synthetase N-terminus A6E01_07410 PF00501 AMP-binding enzyme A6E01_07410 PF13193 AMP-binding enzyme C-terminal domain A6E01_07415 PF03972 MmgE/PrpD family A6E01_07420 PF00285 Citrate synthase, C-terminal domain A6E01_07435 PF07687 Peptidase dimerisation domain A6E01_07435 PF01546 Peptidase family M20/M25/M40 A6E01_07460 PF00472 RF-1 domain A6E01_07470 PF03553 Na+/H+ antiporter family A6E01_07475 PF09905 DNA-binding protein VF530 A6E01_07480 PF00581 Rhodanese-like domain A6E01_07490 PF01292 Prokaryotic cytochrome b561 A6E01_07510 PF10063 Uncharacterized integral membrane protein (DUF2301) A6E01_07520 PF03006 Haemolysin-III related A6E01_07525 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_07535 PF00005 ABC transporter A6E01_07555 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A6E01_07565 PF02378 Phosphotransferase system, EIIC A6E01_07565 PF00367 phosphotransferase system, EIIB A6E01_07570 PF00939 Sodium:sulfate symporter transmembrane region A6E01_07590 PF00403 Heavy-metal-associated domain A6E01_07595 PF13411 MerR HTH family regulatory protein A6E01_07615 PF02683 Cytochrome C biogenesis protein transmembrane region A6E01_07615 PF11412 Disulphide bond corrector protein DsbC A6E01_07620 PF00085 Thioredoxin A6E01_07625 PF06965 Na+/H+ antiporter 1 A6E01_07625 PF13462 Thioredoxin A6E01_07630 PF00892 EamA-like transporter family A6E01_07660 PF05368 NmrA-like family A6E01_07680 PF16868 NMT1-like family A6E01_07685 PF13673 Acetyltransferase (GNAT) domain A6E01_07695 PF00271 Helicase conserved C-terminal domain A6E01_07695 PF00270 DEAD/DEAH box helicase A6E01_07710 PF13247 4Fe-4S dicluster domain A6E01_07715 PF12838 4Fe-4S dicluster domain A6E01_07715 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A6E01_07715 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region A6E01_07715 PF00384 Molybdopterin oxidoreductase A6E01_07715 PF01568 Molydopterin dinucleotide binding domain A6E01_07745 PF02634 FdhD/NarQ family A6E01_07750 PF12849 PBP superfamily domain A6E01_07755 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_07760 PF00005 ABC transporter A6E01_07765 PF12804 MobA-like NTP transferase domain A6E01_07770 PF03453 MoeA N-terminal region (domain I and II) A6E01_07770 PF03454 MoeA C-terminal region (domain IV) A6E01_07770 PF00994 Probable molybdopterin binding domain A6E01_07780 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A6E01_07785 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A6E01_07795 PF00378 Enoyl-CoA hydratase/isomerase A6E01_07805 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster A6E01_07805 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6E01_07810 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II A6E01_07810 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg A6E01_07825 PF00849 RNA pseudouridylate synthase A6E01_07830 PF09382 RQC domain A6E01_07830 PF16124 RecQ zinc-binding A6E01_07830 PF00570 HRDC domain A6E01_07830 PF00271 Helicase conserved C-terminal domain A6E01_07830 PF00270 DEAD/DEAH box helicase A6E01_07835 PF00581 Rhodanese-like domain A6E01_07845 PF00501 AMP-binding enzyme A6E01_07845 PF13193 AMP-binding enzyme C-terminal domain A6E01_07850 PF03616 Sodium/glutamate symporter A6E01_07865 PF01527 Transposase A6E01_07890 PF12102 Domain of unknown function (DUF3578) A6E01_07890 PF07728 AAA domain (dynein-related subfamily) A6E01_07895 PF00271 Helicase conserved C-terminal domain A6E01_07895 PF08463 EcoEI R protein C-terminal A6E01_07895 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) A6E01_07895 PF04851 Type III restriction enzyme, res subunit A6E01_07920 PF13677 Membrane MotB of proton-channel complex MotA/MotB A6E01_07920 PF00691 OmpA family A6E01_07950 PF13808 DDE_Tnp_1-associated A6E01_07950 PF01609 Transposase DDE domain A6E01_08000 PF00589 Phage integrase family A6E01_08000 PF13356 Arm DNA-binding domain A6E01_08015 PF02445 Quinolinate synthetase A protein A6E01_08020 PF13174 Tetratricopeptide repeat A6E01_08020 PF16331 TolA binding protein trimerisation A6E01_08025 PF00691 OmpA family A6E01_08040 PF02472 Biopolymer transport protein ExbD/TolR A6E01_08045 PF01618 MotA/TolQ/ExbB proton channel family A6E01_08050 PF03061 Thioesterase superfamily A6E01_08060 PF08173 Membrane bound YbgT-like protein A6E01_08065 PF02322 Cytochrome bd terminal oxidase subunit II A6E01_08070 PF01654 Cytochrome bd terminal oxidase subunit I A6E01_08075 PF05496 Holliday junction DNA helicase RuvB P-loop domain A6E01_08075 PF05491 RuvB C-terminal winged helix domain A6E01_08075 PF17864 RuvB AAA lid domain A6E01_08080 PF01330 RuvA N terminal domain A6E01_08080 PF07499 RuvA, C-terminal domain A6E01_08085 PF02075 Crossover junction endodeoxyribonuclease RuvC A6E01_08090 PF01336 OB-fold nucleic acid binding domain A6E01_08090 PF00152 tRNA synthetases class II (D, K and N) A6E01_08090 PF02938 GAD domain A6E01_08095 PF13649 Methyltransferase domain A6E01_08100 PF02931 Neurotransmitter-gated ion-channel ligand binding domain A6E01_08105 PF18364 Molybdopterin oxidoreductase N-terminal domain A6E01_08105 PF01568 Molydopterin dinucleotide binding domain A6E01_08105 PF00384 Molybdopterin oxidoreductase A6E01_08110 PF03264 NapC/NirT cytochrome c family, N-terminal region A6E01_08115 PF06796 Periplasmic nitrate reductase protein NapE A6E01_08130 PF16330 MukB hinge domain A6E01_08130 PF04310 MukB N-terminal A6E01_08135 PF04288 MukE-like family A6E01_08150 PF02698 DUF218 domain A6E01_08155 PF02613 Nitrate reductase delta subunit A6E01_08185 PF16036 Chalcone isomerase-like A6E01_08210 PF00106 short chain dehydrogenase A6E01_08230 PF08241 Methyltransferase domain A6E01_08230 PF12697 Alpha/beta hydrolase family A6E01_08245 PF00202 Aminotransferase class-III A6E01_08250 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A6E01_08250 PF02403 Seryl-tRNA synthetase N-terminal domain A6E01_08255 PF00004 ATPase family associated with various cellular activities (AAA) A6E01_08255 PF16193 AAA C-terminal domain A6E01_08255 PF12002 MgsA AAA+ ATPase C terminal A6E01_08260 PF03548 Outer membrane lipoprotein carrier protein LolA A6E01_08265 PF01580 FtsK/SpoIIIE family A6E01_08265 PF09397 Ftsk gamma domain A6E01_08265 PF17854 FtsK alpha domain A6E01_08265 PF13491 4TM region of DNA translocase FtsK/SpoIIIE A6E01_08270 PF01037 Lrp/AsnC ligand binding domain A6E01_08275 PF05222 Alanine dehydrogenase/PNT, N-terminal domain A6E01_08275 PF01262 Alanine dehydrogenase/PNT, C-terminal domain A6E01_08285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_08285 PF03466 LysR substrate binding domain A6E01_08290 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) A6E01_08295 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family A6E01_08300 PF18073 Rubredoxin metal binding domain A6E01_08305 PF06305 Lipopolysaccharide assembly protein A domain A6E01_08315 PF00575 S1 RNA binding domain A6E01_08320 PF02224 Cytidylate kinase A6E01_08330 PF01343 Peptidase family S49 A6E01_08330 PF08496 Peptidase family S49 N-terminal A6E01_08335 PF00106 short chain dehydrogenase A6E01_08340 PF00106 short chain dehydrogenase A6E01_08345 PF01751 Toprim domain A6E01_08345 PF01131 DNA topoisomerase A6E01_08350 PF00881 Nitroreductase family A6E01_08355 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A6E01_08355 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6E01_08360 PF01343 Peptidase family S49 A6E01_08365 PF00710 Asparaginase, N-terminal A6E01_08365 PF17763 Glutaminase/Asparaginase C-terminal domain A6E01_08370 PF13419 Haloacid dehalogenase-like hydrolase A6E01_08375 PF07023 Protein of unknown function (DUF1315) A6E01_08380 PF01641 SelR domain A6E01_08390 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain A6E01_08390 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A6E01_08395 PF01263 Aldose 1-epimerase A6E01_08400 PF13847 Methyltransferase domain A6E01_08415 PF03692 Putative zinc- or iron-chelating domain A6E01_08420 PF00230 Major intrinsic protein A6E01_08425 PF13662 Toprim domain A6E01_08425 PF02132 RecR protein A6E01_08430 PF02575 YbaB/EbfC DNA-binding family A6E01_08435 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding A6E01_08435 PF12170 DNA polymerase III tau subunit V interacting with alpha A6E01_08435 PF12169 DNA polymerase III subunits gamma and tau domain III A6E01_08445 PF04304 Protein of unknown function (DUF454) A6E01_08450 PF00072 Response regulator receiver domain A6E01_08455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_08455 PF03466 LysR substrate binding domain A6E01_08460 PF00156 Phosphoribosyl transferase domain A6E01_08465 PF02674 Colicin V production protein A6E01_08470 PF05036 Sporulation related domain A6E01_08475 PF02875 Mur ligase family, glutamate ligase domain A6E01_08475 PF08245 Mur ligase middle domain A6E01_08480 PF01039 Carboxyl transferase domain A6E01_08480 PF17848 Acetyl-coA carboxylase zinc finger domain A6E01_08485 PF01416 tRNA pseudouridine synthase A6E01_08495 PF01118 Semialdehyde dehydrogenase, NAD binding domain A6E01_08495 PF02774 Semialdehyde dehydrogenase, dimerisation domain A6E01_08500 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A6E01_08500 PF11890 Domain of unknown function (DUF3410) A6E01_08500 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A6E01_08505 PF02801 Beta-ketoacyl synthase, C-terminal domain A6E01_08505 PF00109 Beta-ketoacyl synthase, N-terminal domain A6E01_08510 PF05430 S-adenosyl-L-methionine-dependent methyltransferase A6E01_08510 PF01266 FAD dependent oxidoreductase A6E01_08520 PF08891 YfcL protein A6E01_08525 PF04315 Elongation factor P hydroxylase A6E01_08530 PF03458 UPF0126 domain A6E01_08540 PF01264 Chorismate synthase A6E01_08545 PF05175 Methyltransferase small domain A6E01_08550 PF01713 Smr domain A6E01_08555 PF02469 Fasciclin domain A6E01_08560 PF00300 Histidine phosphatase superfamily (branch 1) A6E01_08565 PF16187 Middle or third domain of peptidase_M16 A6E01_08565 PF05193 Peptidase M16 inactive domain A6E01_08565 PF00675 Insulinase (Peptidase family M16) A6E01_08575 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain A6E01_08575 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain A6E01_08575 PF00378 Enoyl-CoA hydratase/isomerase A6E01_08580 PF00108 Thiolase, N-terminal domain A6E01_08580 PF02803 Thiolase, C-terminal domain A6E01_08585 PF08281 Sigma-70, region 4 A6E01_08585 PF04542 Sigma-70 region 2 A6E01_08595 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) A6E01_08605 PF04333 MlaA lipoprotein A6E01_08610 PF03918 Cytochrome C biogenesis protein A6E01_08615 PF03918 Cytochrome C biogenesis protein A6E01_08620 PF08534 Redoxin A6E01_08625 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal A6E01_08625 PF01578 Cytochrome C assembly protein A6E01_08630 PF03100 CcmE A6E01_08640 PF01578 Cytochrome C assembly protein A6E01_08645 PF03379 CcmB protein A6E01_08650 PF00005 ABC transporter A6E01_08665 PF03466 LysR substrate binding domain A6E01_08665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_08670 PF02872 5'-nucleotidase, C-terminal domain A6E01_08670 PF00149 Calcineurin-like phosphoesterase A6E01_08675 PF01238 Phosphomannose isomerase type I A6E01_08680 PF02595 Glycerate kinase family A6E01_08685 PF07748 Glycosyl hydrolases family 38 C-terminal domain A6E01_08685 PF09261 Alpha mannosidase middle domain A6E01_08685 PF01074 Glycosyl hydrolases family 38 N-terminal domain A6E01_08690 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A6E01_08690 PF02378 Phosphotransferase system, EIIC A6E01_08690 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A6E01_08695 PF00392 Bacterial regulatory proteins, gntR family A6E01_08695 PF07702 UTRA domain A6E01_08705 PF04542 Sigma-70 region 2 A6E01_08705 PF08281 Sigma-70, region 4 A6E01_08715 PF01914 MarC family integral membrane protein A6E01_08720 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A6E01_08725 PF07687 Peptidase dimerisation domain A6E01_08725 PF01546 Peptidase family M20/M25/M40 A6E01_08730 PF03606 C4-dicarboxylate anaerobic carrier A6E01_08735 PF01451 Low molecular weight phosphotyrosine protein phosphatase A6E01_08740 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP A6E01_08745 PF01177 Asp/Glu/Hydantoin racemase A6E01_08750 PF05170 AsmA family A6E01_08755 PF00485 Phosphoribulokinase / Uridine kinase family A6E01_08760 PF10609 NUBPL iron-transfer P-loop NTPase A6E01_08765 PF09334 tRNA synthetases class I (M) A6E01_08765 PF01588 Putative tRNA binding domain A6E01_08775 PF00480 ROK family A6E01_08780 PF01734 Patatin-like phospholipase A6E01_08790 PF00209 Sodium:neurotransmitter symporter family A6E01_08800 PF00367 phosphotransferase system, EIIB A6E01_08800 PF02378 Phosphotransferase system, EIIC A6E01_08805 PF01026 TatD related DNase A6E01_08810 PF09115 DNA polymerase III, delta subunit, C terminal A6E01_08815 PF02223 Thymidylate kinase A6E01_08820 PF02618 YceG-like family A6E01_08825 PF01063 Amino-transferase class IV A6E01_08830 PF00109 Beta-ketoacyl synthase, N-terminal domain A6E01_08830 PF02801 Beta-ketoacyl synthase, C-terminal domain A6E01_08835 PF00550 Phosphopantetheine attachment site A6E01_08845 PF00698 Acyl transferase domain A6E01_08850 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal A6E01_08850 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III A6E01_08855 PF02504 Fatty acid synthesis protein A6E01_08865 PF02620 Large ribosomal RNA subunit accumulation protein YceD A6E01_08870 PF02545 Maf-like protein A6E01_08875 PF01479 S4 domain A6E01_08875 PF00849 RNA pseudouridylate synthase A6E01_08880 PF00575 S1 RNA binding domain A6E01_08880 PF10150 Ribonuclease E/G family A6E01_08880 PF12111 Polyribonucleotide phosphorylase C terminal A6E01_08885 PF01740 STAS domain A6E01_08885 PF00916 Sulfate permease family A6E01_08890 PF01554 MatE A6E01_08920 PF00248 Aldo/keto reductase family A6E01_08935 PF03594 Benzoate membrane transport protein A6E01_08940 PF07883 Cupin domain A6E01_08940 PF01381 Helix-turn-helix A6E01_08945 PF00892 EamA-like transporter family A6E01_08950 PF05971 RNA methyltransferase A6E01_08955 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase A6E01_08955 PF00925 GTP cyclohydrolase II A6E01_08965 PF03547 Membrane transport protein A6E01_08970 PF00121 Triosephosphate isomerase A6E01_08975 PF02734 DAK2 domain A6E01_08980 PF02733 Dak1 domain A6E01_08985 PF04166 Pyridoxal phosphate biosynthetic protein PdxA A6E01_08990 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component A6E01_09000 PF03480 Bacterial extracellular solute-binding protein, family 7 A6E01_09005 PF02502 Ribose/Galactose Isomerase A6E01_09010 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded A6E01_09025 PF14310 Fibronectin type III-like domain A6E01_09025 PF00933 Glycosyl hydrolase family 3 N terminal domain A6E01_09025 PF01915 Glycosyl hydrolase family 3 C-terminal domain A6E01_09040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_09040 PF03466 LysR substrate binding domain A6E01_09055 PF13406 Transglycosylase SLT domain A6E01_09060 PF05166 YcgL domain A6E01_09065 PF05209 Septum formation inhibitor MinC, N-terminal domain A6E01_09065 PF03775 Septum formation inhibitor MinC, C-terminal domain A6E01_09070 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain A6E01_09075 PF03776 Septum formation topological specificity factor MinE A6E01_09080 PF01612 3'-5' exonuclease A6E01_09080 PF00570 HRDC domain A6E01_09085 PF00501 AMP-binding enzyme A6E01_09085 PF13193 AMP-binding enzyme C-terminal domain A6E01_09100 PF00814 Glycoprotease family A6E01_09105 PF04851 Type III restriction enzyme, res subunit A6E01_09105 PF13307 Helicase C-terminal domain A6E01_09110 PF00551 Formyl transferase A6E01_09110 PF01842 ACT domain A6E01_09115 PF06185 YecM protein A6E01_09120 PF03485 Arginyl tRNA synthetase N terminal domain A6E01_09120 PF00750 tRNA synthetases class I (R) A6E01_09120 PF05746 DALR anticodon binding domain A6E01_09125 PF01368 DHH family A6E01_09125 PF02833 DHHA2 domain A6E01_09140 PF01554 MatE A6E01_09145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_09145 PF03466 LysR substrate binding domain A6E01_09150 PF00209 Sodium:neurotransmitter symporter family A6E01_09155 PF00892 EamA-like transporter family A6E01_09170 PF07670 Nucleoside recognition A6E01_09170 PF07664 Ferrous iron transport protein B C terminus A6E01_09170 PF02421 Ferrous iron transport protein B A6E01_09175 PF04023 FeoA domain A6E01_09180 PF01297 Zinc-uptake complex component A periplasmic A6E01_09185 PF00005 ABC transporter A6E01_09190 PF00950 ABC 3 transport family A6E01_09195 PF02629 CoA binding domain A6E01_09195 PF00549 CoA-ligase A6E01_09200 PF08442 ATP-grasp domain A6E01_09200 PF00549 CoA-ligase A6E01_09205 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) A6E01_09205 PF00364 Biotin-requiring enzyme A6E01_09205 PF02817 e3 binding domain A6E01_09210 PF16078 2-oxoglutarate dehydrogenase N-terminus A6E01_09210 PF00676 Dehydrogenase E1 component A6E01_09210 PF16870 2-oxoglutarate dehydrogenase C-terminal A6E01_09210 PF02779 Transketolase, pyrimidine binding domain A6E01_09215 PF13085 2Fe-2S iron-sulfur cluster binding domain A6E01_09220 PF02910 Fumarate reductase flavoprotein C-term A6E01_09220 PF00890 FAD binding domain A6E01_09225 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit A6E01_09230 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit A6E01_09235 PF00285 Citrate synthase, C-terminal domain A6E01_09240 PF02264 LamB porin A6E01_09245 PF00722 Glycosyl hydrolases family 16 A6E01_09255 PF00722 Glycosyl hydrolases family 16 A6E01_09255 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) A6E01_09270 PF00356 Bacterial regulatory proteins, lacI family A6E01_09275 PF01784 NIF3 (NGG1p interacting factor 3) A6E01_09285 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A6E01_09285 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A6E01_09285 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A6E01_09285 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A6E01_09295 PF12697 Alpha/beta hydrolase family A6E01_09305 PF00258 Flavodoxin A6E01_09310 PF01475 Ferric uptake regulator family A6E01_09320 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain A6E01_09320 PF00749 tRNA synthetases class I (E and Q), catalytic domain A6E01_09325 PF00367 phosphotransferase system, EIIB A6E01_09325 PF02378 Phosphotransferase system, EIIC A6E01_09325 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 A6E01_09335 PF01979 Amidohydrolase family A6E01_09340 PF01047 MarR family A6E01_09340 PF00480 ROK family A6E01_09345 PF00999 Sodium/hydrogen exchanger family A6E01_09345 PF02254 TrkA-N domain A6E01_09350 PF00360 Phytochrome region A6E01_09350 PF00990 Diguanylate cyclase, GGDEF domain A6E01_09350 PF01590 GAF domain A6E01_09350 PF00563 EAL domain A6E01_09355 PF13537 Glutamine amidotransferase domain A6E01_09355 PF00733 Asparagine synthase A6E01_09360 PF02357 Transcription termination factor nusG A6E01_09365 PF00762 Ferrochelatase A6E01_09370 PF05191 Adenylate kinase, active site lid A6E01_09375 PF00183 Hsp90 protein A6E01_09375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6E01_09380 PF00486 Transcriptional regulatory protein, C terminal A6E01_09385 PF17323 Trans-membrane regulatory protein ToxS A6E01_09390 PF12850 Calcineurin-like phosphoesterase superfamily domain A6E01_09405 PF07556 Protein of unknown function (DUF1538) A6E01_09410 PF07556 Protein of unknown function (DUF1538) A6E01_09415 PF01370 NAD dependent epimerase/dehydratase family A6E01_09415 PF08338 Domain of unknown function (DUF1731) A6E01_09420 PF00085 Thioredoxin A6E01_09425 PF16200 C-terminal region of band_7 A6E01_09425 PF01145 SPFH domain / Band 7 family A6E01_09435 PF00533 BRCA1 C Terminus (BRCT) domain A6E01_09435 PF12826 Helix-hairpin-helix motif A6E01_09435 PF03119 NAD-dependent DNA ligase C4 zinc finger domain A6E01_09435 PF03120 NAD-dependent DNA ligase OB-fold domain A6E01_09435 PF01653 NAD-dependent DNA ligase adenylation domain A6E01_09440 PF04354 ZipA, C-terminal FtsZ-binding domain A6E01_09450 PF00291 Pyridoxal-phosphate dependent enzyme A6E01_09455 PF00381 PTS HPr component phosphorylation site A6E01_09460 PF05524 PEP-utilising enzyme, N-terminal A6E01_09460 PF00391 PEP-utilising enzyme, mobile domain A6E01_09460 PF02896 PEP-utilising enzyme, TIM barrel domain A6E01_09465 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 A6E01_09470 PF04261 Dyp-type peroxidase family A6E01_09475 PF11143 Protein of unknown function (DUF2919) A6E01_09490 PF03960 ArsC family A6E01_09495 PF07687 Peptidase dimerisation domain A6E01_09495 PF01546 Peptidase family M20/M25/M40 A6E01_09515 PF00701 Dihydrodipicolinate synthetase family A6E01_09520 PF01842 ACT domain A6E01_09525 PF00578 AhpC/TSA family A6E01_09530 PF01594 AI-2E family transporter A6E01_09535 PF13181 Tetratricopeptide repeat A6E01_09535 PF01435 Peptidase family M48 A6E01_09540 PF03960 ArsC family A6E01_09550 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain A6E01_09550 PF04616 Glycosyl hydrolases family 43 A6E01_09565 PF02769 AIR synthase related protein, C-terminal domain A6E01_09565 PF00586 AIR synthase related protein, N-terminal domain A6E01_09570 PF00551 Formyl transferase A6E01_09580 PF13358 DDE superfamily endonuclease A6E01_09585 PF13230 Glutamine amidotransferases class-II A6E01_09590 PF13580 SIS domain A6E01_09595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A6E01_09595 PF02770 Acyl-CoA dehydrogenase, middle domain A6E01_09595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A6E01_09595 PF09317 Domain of unknown function (DUF1974) A6E01_09600 PF00929 Exonuclease A6E01_09605 PF00075 RNase H A6E01_09610 PF08241 Methyltransferase domain A6E01_09615 PF16123 Hydroxyacylglutathione hydrolase C-terminus A6E01_09615 PF00753 Metallo-beta-lactamase superfamily A6E01_09620 PF01464 Transglycosylase SLT domain A6E01_09620 PF01476 LysM domain A6E01_09625 PF03372 Endonuclease/Exonuclease/phosphatase family A6E01_09630 PF00543 Nitrogen regulatory protein P-II A6E01_09635 PF00034 Cytochrome c A6E01_09640 PF01171 PP-loop family A6E01_09640 PF09179 TilS substrate binding domain A6E01_09640 PF11734 TilS substrate C-terminal domain A6E01_09650 PF07733 Bacterial DNA polymerase III alpha NTPase domain A6E01_09650 PF17657 Bacterial DNA polymerase III alpha subunit finger domain A6E01_09650 PF14579 Helix-hairpin-helix motif A6E01_09650 PF02811 PHP domain A6E01_09650 PF01336 OB-fold nucleic acid binding domain A6E01_09660 PF02684 Lipid-A-disaccharide synthetase A6E01_09665 PF00132 Bacterial transferase hexapeptide (six repeats) A6E01_09665 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 A6E01_09670 PF07977 FabA-like domain A6E01_09675 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD A6E01_09675 PF00132 Bacterial transferase hexapeptide (six repeats) A6E01_09680 PF03938 Outer membrane protein (OmpH-like) A6E01_09685 PF07244 Surface antigen variable number repeat A6E01_09685 PF01103 Surface antigen A6E01_09690 PF17820 PDZ domain A6E01_09690 PF02163 Peptidase family M50 A6E01_09695 PF13288 DXP reductoisomerase C-terminal domain A6E01_09695 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain A6E01_09695 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase A6E01_09705 PF01255 Putative undecaprenyl diphosphate synthase A6E01_09710 PF01765 Ribosome recycling factor A6E01_09715 PF00696 Amino acid kinase family A6E01_09720 PF00889 Elongation factor TS A6E01_09725 PF00318 Ribosomal protein S2 A6E01_09730 PF00557 Metallopeptidase family M24 A6E01_09735 PF01966 HD domain A6E01_09745 PF11944 Protein of unknown function (DUF3461) A6E01_09750 PF00849 RNA pseudouridylate synthase A6E01_09755 PF04287 tRNA pseudouridine synthase C A6E01_09790 PF11953 Domain of unknown function (DUF3470) A6E01_09790 PF00037 4Fe-4S binding domain A6E01_09795 PF08032 RNA 2'-O ribose methyltransferase substrate binding A6E01_09795 PF00588 SpoU rRNA Methylase family A6E01_09800 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) A6E01_09805 PF07348 Syd protein (SUKH-2) A6E01_09810 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term A6E01_09810 PF14489 QueF-like protein A6E01_09820 PF11892 Domain of unknown function (DUF3412) A6E01_09820 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases A6E01_09820 PF03641 Possible lysine decarboxylase A6E01_09825 PF01367 5'-3' exonuclease, C-terminal SAM fold A6E01_09825 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain A6E01_09830 PF02371 Transposase IS116/IS110/IS902 family A6E01_09830 PF01548 Transposase A6E01_09835 PF01728 FtsJ-like methyltransferase A6E01_09835 PF18125 RlmM ferredoxin-like domain A6E01_09840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_09840 PF03466 LysR substrate binding domain A6E01_09845 PF02568 Thiamine biosynthesis protein (ThiI) A6E01_09845 PF02926 THUMP domain A6E01_09855 PF00348 Polyprenyl synthetase A6E01_09860 PF02779 Transketolase, pyrimidine binding domain A6E01_09860 PF02780 Transketolase, C-terminal domain A6E01_09860 PF13292 1-deoxy-D-xylulose-5-phosphate synthase A6E01_09865 PF04608 Phosphatidylglycerophosphatase A A6E01_09870 PF02769 AIR synthase related protein, C-terminal domain A6E01_09870 PF00586 AIR synthase related protein, N-terminal domain A6E01_09880 PF00885 6,7-dimethyl-8-ribityllumazine synthase A6E01_09885 PF00925 GTP cyclohydrolase II A6E01_09885 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase A6E01_09890 PF00677 Lumazine binding domain A6E01_09895 PF01872 RibD C-terminal domain A6E01_09895 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region A6E01_09900 PF03477 ATP cone domain A6E01_09905 PF00171 Aldehyde dehydrogenase family A6E01_09910 PF00696 Amino acid kinase family A6E01_09910 PF01472 PUA domain A6E01_09915 PF07417 Sigma factor-binding transcriptional regulator Crl A6E01_09925 PF00156 Phosphoribosyl transferase domain A6E01_09930 PF00860 Permease family A6E01_09935 PF01546 Peptidase family M20/M25/M40 A6E01_09935 PF07687 Peptidase dimerisation domain A6E01_09945 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal A6E01_09945 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain A6E01_09945 PF02769 AIR synthase related protein, C-terminal domain A6E01_09950 PF00497 Bacterial extracellular solute-binding proteins, family 3 A6E01_09950 PF01464 Transglycosylase SLT domain A6E01_09955 PF14437 MafB19-like deaminase A6E01_09960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_09960 PF03466 LysR substrate binding domain A6E01_09965 PF00107 Zinc-binding dehydrogenase A6E01_09965 PF08240 Alcohol dehydrogenase GroES-like domain A6E01_09970 PF00756 Putative esterase A6E01_09975 PF03806 AbgT putative transporter family A6E01_10000 PF00226 DnaJ domain A6E01_10000 PF01556 DnaJ C terminal domain A6E01_10000 PF00684 DnaJ central domain A6E01_10005 PF00012 Hsp70 protein A6E01_10010 PF01025 GrpE A6E01_10015 PF01513 ATP-NAD kinase A6E01_10020 PF02463 RecF/RecN/SMC N terminal domain A6E01_10025 PF04355 SmpA / OmlA family A6E01_10030 PF03658 RnfH family Ubiquitin A6E01_10035 PF03364 Polyketide cyclase / dehydrase and lipid transport A6E01_10040 PF01668 SmpB protein A6E01_10050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_10050 PF03466 LysR substrate binding domain A6E01_10055 PF02631 RecX family A6E01_10060 PF05036 Sporulation related domain A6E01_10060 PF03330 Lytic transglycolase A6E01_10070 PF08787 Alginate lyase A6E01_10080 PF07883 Cupin domain A6E01_10085 PF00474 Sodium:solute symporter family A6E01_10090 PF02614 Glucuronate isomerase A6E01_10100 PF00005 ABC transporter A6E01_10105 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_10110 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_10115 PF00497 Bacterial extracellular solute-binding proteins, family 3 A6E01_10115 PF01464 Transglycosylase SLT domain A6E01_10120 PF00392 Bacterial regulatory proteins, gntR family A6E01_10125 PF00202 Aminotransferase class-III A6E01_10135 PF00106 short chain dehydrogenase A6E01_10140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_10140 PF03466 LysR substrate binding domain A6E01_10145 PF00474 Sodium:solute symporter family A6E01_10150 PF12464 Maltose acetyltransferase A6E01_10150 PF00132 Bacterial transferase hexapeptide (six repeats) A6E01_10160 PF08787 Alginate lyase A6E01_10165 PF01970 Tripartite tricarboxylate transporter TctA family A6E01_10175 PF03401 Tripartite tricarboxylate transporter family receptor A6E01_10185 PF01758 Sodium Bile acid symporter family A6E01_10190 PF01022 Bacterial regulatory protein, arsR family A6E01_10195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_10195 PF03466 LysR substrate binding domain A6E01_10200 PF01226 Formate/nitrite transporter A6E01_10205 PF01066 CDP-alcohol phosphatidyltransferase A6E01_10210 PF00005 ABC transporter A6E01_10215 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_10220 PF13416 Bacterial extracellular solute-binding protein A6E01_10225 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) A6E01_10230 PF00958 GMP synthase C terminal domain A6E01_10230 PF00117 Glutamine amidotransferase class-I A6E01_10230 PF02540 NAD synthase A6E01_10235 PF00571 CBS domain A6E01_10235 PF00478 IMP dehydrogenase / GMP reductase domain A6E01_10240 PF13742 OB-fold nucleic acid binding domain A6E01_10240 PF02601 Exonuclease VII, large subunit A6E01_10250 PF01926 50S ribosome-binding GTPase A6E01_10250 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal A6E01_10255 PF13360 PQQ-like domain A6E01_10260 PF09976 Tetratricopeptide repeat-like domain A6E01_10265 PF03129 Anticodon binding domain A6E01_10265 PF13393 Histidyl-tRNA synthetase A6E01_10275 PF13464 Domain of unknown function (DUF4115) A6E01_10285 PF04055 Radical SAM superfamily A6E01_10290 PF00334 Nucleoside diphosphate kinase A6E01_10295 PF12404 Peptidase A6E01_10295 PF00883 Cytosol aminopeptidase family, catalytic domain A6E01_10300 PF04384 Iron-sulphur cluster assembly A6E01_10305 PF00111 2Fe-2S iron-sulfur cluster binding domain A6E01_10315 PF07743 HSCB C-terminal oligomerisation domain A6E01_10315 PF00226 DnaJ domain A6E01_10320 PF01521 Iron-sulphur cluster biosynthesis A6E01_10325 PF01592 NifU-like N terminal domain A6E01_10330 PF00266 Aminotransferase class-V A6E01_10335 PF02082 Transcriptional regulator A6E01_10340 PF00588 SpoU rRNA Methylase family A6E01_10345 PF00459 Inositol monophosphatase family A6E01_10350 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A6E01_10350 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A6E01_10350 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A6E01_10350 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A6E01_10355 PF00809 Pterin binding enzyme A6E01_10360 PF17862 AAA+ lid domain A6E01_10360 PF06480 FtsH Extracellular A6E01_10360 PF01434 Peptidase family M41 A6E01_10360 PF00004 ATPase family associated with various cellular activities (AAA) A6E01_10370 PF01985 CRS1 / YhbY (CRM) domain A6E01_10375 PF03449 Transcription elongation factor, N-terminal A6E01_10375 PF01272 Transcription elongation factor, GreA/GreB, C-term A6E01_10380 PF13609 Gram-negative porin A6E01_10385 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family A6E01_10390 PF03448 MgtE intracellular N domain A6E01_10390 PF01769 Divalent cation transporter A6E01_10390 PF00571 CBS domain A6E01_10395 PF00579 tRNA synthetases class I (W and Y) A6E01_10400 PF01551 Peptidase family M23 A6E01_10400 PF08525 Opacity-associated protein A N-terminal motif A6E01_10400 PF01476 LysM domain A6E01_10410 PF00873 AcrB/AcrD/AcrF family A6E01_10415 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A6E01_10420 PF01521 Iron-sulphur cluster biosynthesis A6E01_10425 PF00202 Aminotransferase class-III A6E01_10430 PF01594 AI-2E family transporter A6E01_10435 PF05175 Methyltransferase small domain A6E01_10435 PF08468 Methyltransferase small domain N-terminal A6E01_10440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6E01_10440 PF00512 His Kinase A (phospho-acceptor) domain A6E01_10440 PF00072 Response regulator receiver domain A6E01_10440 PF09308 LuxQ, periplasmic A6E01_10445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A6E01_10450 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_10455 PF12911 N-terminal TM domain of oligopeptide transport permease C A6E01_10455 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_10460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A6E01_10460 PF00005 ABC transporter A6E01_10465 PF00005 ABC transporter A6E01_10465 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A6E01_10475 PF02838 Glycosyl hydrolase family 20, domain 2 A6E01_10475 PF00728 Glycosyl hydrolase family 20, catalytic domain A6E01_10480 PF00005 ABC transporter A6E01_10480 PF08402 TOBE domain A6E01_10495 PF00909 Ammonium Transporter Family A6E01_10500 PF00543 Nitrogen regulatory protein P-II A6E01_10505 PF06062 Uncharacterised protein family (UPF0231) A6E01_10510 PF13556 PucR C-terminal helix-turn-helix domain A6E01_10510 PF17853 GGDEF-like domain A6E01_10510 PF05651 Putative sugar diacid recognition A6E01_10515 PF02447 GntP family permease A6E01_10520 PF02595 Glycerate kinase family A6E01_10525 PF11791 Aconitate B N-terminal domain A6E01_10525 PF00330 Aconitase family (aconitate hydratase) A6E01_10525 PF06434 Aconitate hydratase 2 N-terminus A6E01_10530 PF01734 Patatin-like phospholipase A6E01_10535 PF00912 Transglycosylase A6E01_10535 PF00905 Penicillin binding protein transpeptidase domain A6E01_10535 PF14814 Bifunctional transglycosylase second domain A6E01_10540 PF00270 DEAD/DEAH box helicase A6E01_10540 PF00271 Helicase conserved C-terminal domain A6E01_10540 PF04408 Helicase associated domain (HA2) A6E01_10540 PF08482 ATP-dependent helicase C-terminal A6E01_10545 PF17746 SfsA N-terminal OB domain A6E01_10545 PF03749 Sugar fermentation stimulation protein RE domain A6E01_10550 PF01258 Prokaryotic dksA/traR C4-type zinc finger A6E01_10555 PF00749 tRNA synthetases class I (E and Q), catalytic domain A6E01_10560 PF12627 Probable RNA and SrmB- binding site of polymerase A A6E01_10560 PF12626 Polymerase A arginine-rich C-terminus A6E01_10560 PF01743 Poly A polymerase head domain A6E01_10565 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) A6E01_10570 PF02548 Ketopantoate hydroxymethyltransferase A6E01_10575 PF02569 Pantoate-beta-alanine ligase A6E01_10580 PF01061 ABC-2 type transporter A6E01_10585 PF00005 ABC transporter A6E01_10590 PF00484 Carbonic anhydrase A6E01_10595 PF00156 Phosphoribosyl transferase domain A6E01_10600 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A6E01_10600 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6E01_10605 PF00364 Biotin-requiring enzyme A6E01_10605 PF02817 e3 binding domain A6E01_10605 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) A6E01_10610 PF17831 Pyruvate dehydrogenase E1 component middle domain A6E01_10610 PF00456 Transketolase, thiamine diphosphate binding domain A6E01_10615 PF07729 FCD domain A6E01_10615 PF00392 Bacterial regulatory proteins, gntR family A6E01_10620 PF01510 N-acetylmuramoyl-L-alanine amidase A6E01_10625 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain A6E01_10625 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain A6E01_10630 PF00114 Pilin (bacterial filament) A6E01_10630 PF07963 Prokaryotic N-terminal methylation motif A6E01_10635 PF00437 Type II/IV secretion system protein A6E01_10635 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain A6E01_10640 PF00482 Type II secretion system (T2SS), protein F A6E01_10645 PF01478 Type IV leader peptidase family A6E01_10645 PF06750 Bacterial Peptidase A24 N-terminal domain A6E01_10650 PF01121 Dephospho-CoA kinase A6E01_10655 PF07072 Cell division protein A6E01_10660 PF03884 DNA gyrase inhibitor YacG A6E01_10675 PF05239 PRC-barrel domain A6E01_10675 PF01782 RimM N-terminal domain A6E01_10680 PF00886 Ribosomal protein S16 A6E01_10685 PF00448 SRP54-type protein, GTPase domain A6E01_10685 PF02881 SRP54-type protein, helical bundle domain A6E01_10685 PF02978 Signal peptide binding domain A6E01_10690 PF01578 Cytochrome C assembly protein A6E01_10695 PF03471 Transporter associated domain A6E01_10695 PF01595 Cyclin M transmembrane N-terminal domain A6E01_10695 PF00571 CBS domain A6E01_10700 PF02664 S-Ribosylhomocysteinase (LuxS) A6E01_10705 PF04262 Glutamate-cysteine ligase A6E01_10710 PF00675 Insulinase (Peptidase family M16) A6E01_10710 PF05193 Peptidase M16 inactive domain A6E01_10715 PF09335 SNARE associated Golgi protein A6E01_10720 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit A6E01_10725 PF02436 Conserved carboxylase domain A6E01_10725 PF00364 Biotin-requiring enzyme A6E01_10725 PF00682 HMGL-like A6E01_10730 PF04277 Oxaloacetate decarboxylase, gamma chain A6E01_10775 PF02599 Global regulator protein family A6E01_10780 PF13840 ACT domain A6E01_10780 PF01842 ACT domain A6E01_10780 PF00696 Amino acid kinase family A6E01_10785 PF02272 DHHA1 domain A6E01_10785 PF01411 tRNA synthetases class II (A) A6E01_10785 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain A6E01_10790 PF02631 RecX family A6E01_10795 PF00154 recA bacterial DNA recombination protein A6E01_10800 PF02464 Competence-damaged protein A6E01_10805 PF00488 MutS domain V A6E01_10805 PF01624 MutS domain I A6E01_10805 PF05188 MutS domain II A6E01_10805 PF05192 MutS domain III A6E01_10805 PF05190 MutS family domain IV A6E01_10810 PF00140 Sigma-70 factor, region 1.2 A6E01_10810 PF04542 Sigma-70 region 2 A6E01_10810 PF04545 Sigma-70, region 4 A6E01_10810 PF04539 Sigma-70 region 3 A6E01_10815 PF01476 LysM domain A6E01_10815 PF01551 Peptidase family M23 A6E01_10825 PF01975 Survival protein SurE A6E01_10830 PF01142 tRNA pseudouridine synthase D (TruD) A6E01_10835 PF02542 YgbB family A6E01_10840 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase A6E01_10845 PF04977 Septum formation initiator A6E01_10850 PF03952 Enolase, N-terminal domain A6E01_10850 PF00113 Enolase, C-terminal TIM barrel domain A6E01_10855 PF06418 CTP synthase N-terminus A6E01_10855 PF00117 Glutamine amidotransferase class-I A6E01_10860 PF03819 MazG nucleotide pyrophosphohydrolase domain A6E01_10865 PF02824 TGS domain A6E01_10865 PF04607 Region found in RelA / SpoT proteins A6E01_10865 PF13291 ACT domain A6E01_10870 PF01938 TRAM domain A6E01_10870 PF05958 tRNA (Uracil-5-)-methyltransferase A6E01_10875 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) A6E01_10875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6E01_10875 PF00512 His Kinase A (phospho-acceptor) domain A6E01_10875 PF01627 Hpt domain A6E01_10875 PF00072 Response regulator receiver domain A6E01_10875 PF00672 HAMP domain A6E01_10880 PF01648 4'-phosphopantetheinyl transferase superfamily A6E01_10885 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ A6E01_10890 PF11967 Recombination protein O N terminal A6E01_10890 PF02565 Recombination protein O C terminal A6E01_10895 PF07650 KH domain A6E01_10895 PF01926 50S ribosome-binding GTPase A6E01_10905 PF10502 Signal peptidase, peptidase S26 A6E01_10910 PF06421 GTP-binding protein LepA C-terminus A6E01_10910 PF03144 Elongation factor Tu domain 2 A6E01_10910 PF00009 Elongation factor Tu GTP binding domain A6E01_10910 PF00679 Elongation factor G C-terminus A6E01_10920 PF17188 MucB/RseB C-terminal domain A6E01_10920 PF03888 MucB/RseB N-terminal domain A6E01_10925 PF03872 Anti sigma-E protein RseA, N-terminal domain A6E01_10925 PF03873 Anti sigma-E protein RseA, C-terminal domain A6E01_10930 PF08281 Sigma-70, region 4 A6E01_10930 PF04542 Sigma-70 region 2 A6E01_10935 PF02910 Fumarate reductase flavoprotein C-term A6E01_10935 PF00890 FAD binding domain A6E01_10940 PF03937 Flavinator of succinate dehydrogenase A6E01_10960 PF01494 FAD binding domain A6E01_10965 PF01494 FAD binding domain A6E01_10975 PF05164 Cell division protein ZapA A6E01_10985 PF01812 5-formyltetrahydrofolate cyclo-ligase family A6E01_10990 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) A6E01_10995 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A6E01_10995 PF01842 ACT domain A6E01_10995 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A6E01_11005 PF05552 Conserved TM helix A6E01_11005 PF00924 Mechanosensitive ion channel A6E01_11010 PF01116 Fructose-bisphosphate aldolase class-II A6E01_11015 PF00162 Phosphoglycerate kinase A6E01_11020 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain A6E01_11020 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A6E01_11025 PF02780 Transketolase, C-terminal domain A6E01_11025 PF00456 Transketolase, thiamine diphosphate binding domain A6E01_11025 PF02779 Transketolase, pyrimidine binding domain A6E01_11045 PF04231 Endonuclease I A6E01_11050 PF04452 RNA methyltransferase A6E01_11055 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain A6E01_11055 PF02951 Prokaryotic glutathione synthetase, N-terminal domain A6E01_11065 PF03652 Holliday junction resolvase A6E01_11070 PF00437 Type II/IV secretion system protein A6E01_11075 PF00437 Type II/IV secretion system protein A6E01_11080 PF01168 Alanine racemase, N-terminal domain A6E01_11085 PF03807 NADP oxidoreductase coenzyme F420-dependent A6E01_11085 PF14748 Pyrroline-5-carboxylate reductase dimerisation A6E01_11090 PF02325 YGGT family A6E01_11100 PF01725 Ham1 family A6E01_11105 PF04055 Radical SAM superfamily A6E01_11105 PF06969 HemN C-terminal domain A6E01_11110 PF04960 Glutaminase A6E01_11120 PF02390 Putative methyltransferase A6E01_11125 PF00633 Helix-hairpin-helix motif A6E01_11125 PF10576 Iron-sulfur binding domain of endonuclease III A6E01_11125 PF00730 HhH-GPD superfamily base excision DNA repair protein A6E01_11125 PF14815 NUDIX domain A6E01_11135 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain A6E01_11135 PF01464 Transglycosylase SLT domain A6E01_11200 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A6E01_11200 PF02378 Phosphotransferase system, EIIC A6E01_11200 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A6E01_11205 PF08125 Mannitol dehydrogenase C-terminal domain A6E01_11205 PF01232 Mannitol dehydrogenase Rossmann domain A6E01_11210 PF05068 Mannitol repressor A6E01_11220 PF00455 DeoR C terminal sensor domain A6E01_11220 PF08220 DeoR-like helix-turn-helix domain A6E01_11225 PF01380 SIS domain A6E01_11230 PF12833 Helix-turn-helix domain A6E01_11240 PF04616 Glycosyl hydrolases family 43 A6E01_11240 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain A6E01_11245 PF04616 Glycosyl hydrolases family 43 A6E01_11255 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_11260 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_11270 PF08402 TOBE domain A6E01_11270 PF00005 ABC transporter A6E01_11275 PF00005 ABC transporter A6E01_11275 PF08402 TOBE domain A6E01_11285 PF00923 Transaldolase/Fructose-6-phosphate aldolase A6E01_11290 PF02780 Transketolase, C-terminal domain A6E01_11290 PF00456 Transketolase, thiamine diphosphate binding domain A6E01_11290 PF02779 Transketolase, pyrimidine binding domain A6E01_11295 PF02782 FGGY family of carbohydrate kinases, C-terminal domain A6E01_11295 PF00370 FGGY family of carbohydrate kinases, N-terminal domain A6E01_11310 PF03739 Lipopolysaccharide export system permease LptF/LptG A6E01_11315 PF03739 Lipopolysaccharide export system permease LptF/LptG A6E01_11320 PF02789 Cytosol aminopeptidase family, N-terminal domain A6E01_11320 PF00883 Cytosol aminopeptidase family, catalytic domain A6E01_11325 PF04364 DNA polymerase III chi subunit, HolC A6E01_11330 PF08264 Anticodon-binding domain of tRNA A6E01_11330 PF00133 tRNA synthetases class I (I, L, M and V) A6E01_11330 PF10458 Valyl tRNA synthetase tRNA binding arm A6E01_11345 PF06877 Regulator of ribonuclease activity B A6E01_11355 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain A6E01_11355 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain A6E01_11360 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain A6E01_11360 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain A6E01_11365 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain A6E01_11365 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain A6E01_11370 PF01042 Endoribonuclease L-PSP A6E01_11375 PF01553 Acyltransferase A6E01_11380 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) A6E01_11385 PF01722 BolA-like protein A6E01_11395 PF05494 MlaC protein A6E01_11400 PF02470 MlaD protein A6E01_11405 PF02405 Permease MlaE A6E01_11410 PF00005 ABC transporter A6E01_11415 PF01699 Sodium/calcium exchanger protein A6E01_11420 PF00571 CBS domain A6E01_11420 PF01380 SIS domain A6E01_11440 PF00005 ABC transporter A6E01_11440 PF12399 Branched-chain amino acid ATP-binding cassette transporter A6E01_11445 PF04552 Sigma-54, DNA binding domain A6E01_11445 PF04963 Sigma-54 factor, core binding domain A6E01_11445 PF00309 Sigma-54 factor, Activator interacting domain (AID) A6E01_11450 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein A6E01_11455 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A6E01_11460 PF03668 P-loop ATPase protein family A6E01_11465 PF00381 PTS HPr component phosphorylation site A6E01_11470 PF01769 Divalent cation transporter A6E01_11470 PF03448 MgtE intracellular N domain A6E01_11470 PF00571 CBS domain A6E01_11475 PF01523 Putative modulator of DNA gyrase A6E01_11485 PF01523 Putative modulator of DNA gyrase A6E01_11490 PF00795 Carbon-nitrogen hydrolase A6E01_11495 PF13502 AsmA-like C-terminal region A6E01_11495 PF13116 Protein of unknown function A6E01_11500 PF10150 Ribonuclease E/G family A6E01_11500 PF00575 S1 RNA binding domain A6E01_11505 PF02545 Maf-like protein A6E01_11510 PF04093 rod shape-determining protein MreD A6E01_11515 PF04085 rod shape-determining protein MreC A6E01_11550 PF07963 Prokaryotic N-terminal methylation motif A6E01_11550 PF00114 Pilin (bacterial filament) A6E01_11555 PF00114 Pilin (bacterial filament) A6E01_11555 PF07963 Prokaryotic N-terminal methylation motif A6E01_11560 PF07963 Prokaryotic N-terminal methylation motif A6E01_11560 PF00114 Pilin (bacterial filament) A6E01_11570 PF00482 Type II secretion system (T2SS), protein F A6E01_11575 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain A6E01_11575 PF00437 Type II/IV secretion system protein A6E01_11585 PF01471 Putative peptidoglycan binding domain A6E01_11585 PF13401 AAA domain A6E01_11590 PF00263 Bacterial type II and III secretion system protein A6E01_11590 PF03958 Bacterial type II/III secretion system short domain A6E01_11610 PF00990 Diguanylate cyclase, GGDEF domain A6E01_11610 PF17157 Gammaproteobacterial periplasmic sensor domain A6E01_11610 PF00563 EAL domain A6E01_11615 PF00436 Single-strand binding protein family A6E01_11620 PF00196 Bacterial regulatory proteins, luxR family A6E01_11625 PF00483 Nucleotidyl transferase A6E01_11630 PF00005 ABC transporter A6E01_11630 PF17760 UvrA interaction domain A6E01_11630 PF17755 UvrA DNA-binding domain A6E01_11640 PF00266 Aminotransferase class-V A6E01_11645 PF00696 Amino acid kinase family A6E01_11645 PF01842 ACT domain A6E01_11650 PF02574 Homocysteine S-methyltransferase A6E01_11650 PF02310 B12 binding domain A6E01_11650 PF00809 Pterin binding enzyme A6E01_11650 PF02607 B12 binding domain A6E01_11650 PF02965 Vitamin B12 dependent methionine synthase, activation domain A6E01_11655 PF00999 Sodium/hydrogen exchanger family A6E01_11660 PF04204 Homoserine O-succinyltransferase A6E01_11675 PF13358 DDE superfamily endonuclease A6E01_11755 PF01507 Phosphoadenosine phosphosulfate reductase family A6E01_11760 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain A6E01_11760 PF01077 Nitrite and sulphite reductase 4Fe-4S domain A6E01_11765 PF00175 Oxidoreductase NAD-binding domain A6E01_11765 PF00258 Flavodoxin A6E01_11765 PF00667 FAD binding domain A6E01_11785 PF01207 Dihydrouridine synthase (Dus) A6E01_11790 PF00342 Phosphoglucose isomerase A6E01_11795 PF01168 Alanine racemase, N-terminal domain A6E01_11795 PF00842 Alanine racemase, C-terminal domain A6E01_11800 PF03796 DnaB-like helicase C terminal domain A6E01_11800 PF00772 DnaB-like helicase N terminal domain A6E01_11810 PF01281 Ribosomal protein L9, N-terminal domain A6E01_11810 PF03948 Ribosomal protein L9, C-terminal domain A6E01_11815 PF01084 Ribosomal protein S18 A6E01_11820 PF00436 Single-strand binding protein family A6E01_11825 PF01250 Ribosomal protein S6 A6E01_11830 PF00881 Nitroreductase family A6E01_11835 PF08032 RNA 2'-O ribose methyltransferase substrate binding A6E01_11835 PF00588 SpoU rRNA Methylase family A6E01_11840 PF17876 Cold shock domain A6E01_11840 PF08206 Ribonuclease B OB domain A6E01_11840 PF00773 RNB domain A6E01_11840 PF00575 S1 RNA binding domain A6E01_11840 PF08461 Ribonuclease R winged-helix domain A6E01_11845 PF02082 Transcriptional regulator A6E01_11850 PF00970 Oxidoreductase FAD-binding domain A6E01_11850 PF00042 Globin A6E01_11850 PF00175 Oxidoreductase NAD-binding domain A6E01_11855 PF00709 Adenylosuccinate synthetase A6E01_11860 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) A6E01_11865 PF01145 SPFH domain / Band 7 family A6E01_11870 PF12221 Bacterial membrane protein N terminal A6E01_11870 PF01145 SPFH domain / Band 7 family A6E01_11875 PF13167 GTP-binding GTPase N-terminal A6E01_11875 PF01926 50S ribosome-binding GTPase A6E01_11875 PF16360 GTP-binding GTPase Middle Region A6E01_11880 PF17209 Hfq protein A6E01_11890 PF01119 DNA mismatch repair protein, C-terminal domain A6E01_11890 PF08676 MutL C terminal dimerisation domain A6E01_11895 PF01520 N-acetylmuramoyl-L-alanine amidase A6E01_11900 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE A6E01_11905 PF08331 Domain of unknown function (DUF1730) A6E01_11955 PF00929 Exonuclease A6E01_11960 PF03193 RsgA GTPase A6E01_11965 PF02666 Phosphatidylserine decarboxylase A6E01_11975 PF01040 UbiA prenyltransferase family A6E01_11980 PF03737 Aldolase/RraA A6E01_11985 PF02080 TrkA-C domain A6E01_11985 PF03600 Citrate transporter A6E01_12000 PF00152 tRNA synthetases class II (D, K and N) A6E01_12005 PF02910 Fumarate reductase flavoprotein C-term A6E01_12005 PF00890 FAD binding domain A6E01_12010 PF13183 4Fe-4S dicluster domain A6E01_12010 PF13085 2Fe-2S iron-sulfur cluster binding domain A6E01_12015 PF02300 Fumarate reductase subunit C A6E01_12020 PF02313 Fumarate reductase subunit D A6E01_12025 PF09285 Elongation factor P, C-terminal A6E01_12025 PF01132 Elongation factor P (EF-P) OB domain A6E01_12025 PF08207 Elongation factor P (EF-P) KOW-like domain A6E01_12030 PF04055 Radical SAM superfamily A6E01_12040 PF00005 ABC transporter A6E01_12040 PF12848 ABC transporter A6E01_12045 PF00005 ABC transporter A6E01_12050 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) A6E01_12050 PF11852 Domain of unknown function (DUF3372) A6E01_12050 PF03714 Bacterial pullanase-associated domain A6E01_12050 PF18494 Pullulanase Ins domain A6E01_12050 PF17967 Pullulanase N2 domain A6E01_12055 PF00118 TCP-1/cpn60 chaperonin family A6E01_12060 PF00166 Chaperonin 10 Kd subunit A6E01_12070 PF06426 Serine acetyltransferase, N-terminal A6E01_12070 PF00132 Bacterial transferase hexapeptide (six repeats) A6E01_12075 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus A6E01_12075 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus A6E01_12080 PF02556 Preprotein translocase subunit SecB A6E01_12085 PF00581 Rhodanese-like domain A6E01_12095 PF01551 Peptidase family M23 A6E01_12100 PF06005 Cell division protein ZapB A6E01_12105 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded A6E01_12120 PF00121 Triosephosphate isomerase A6E01_12125 PF00365 Phosphofructokinase A6E01_12130 PF01545 Cation efflux family A6E01_12130 PF16916 Dimerisation domain of Zinc Transporter A6E01_12140 PF00072 Response regulator receiver domain A6E01_12140 PF00486 Transcriptional regulatory protein, C terminal A6E01_12145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6E01_12145 PF00672 HAMP domain A6E01_12145 PF16527 Two-component sensor protein CpxA, periplasmic domain A6E01_12145 PF00512 His Kinase A (phospho-acceptor) domain A6E01_12150 PF00588 SpoU rRNA Methylase family A6E01_12155 PF04186 FxsA cytoplasmic membrane protein A6E01_12160 PF01797 Transposase IS200 like A6E01_12165 PF00206 Lyase A6E01_12165 PF10415 Fumarase C C-terminus A6E01_12170 PF03605 Anaerobic c4-dicarboxylate membrane transporter A6E01_12175 PF11412 Disulphide bond corrector protein DsbC A6E01_12175 PF02683 Cytochrome C biogenesis protein transmembrane region A6E01_12180 PF00072 Response regulator receiver domain A6E01_12180 PF00196 Bacterial regulatory proteins, luxR family A6E01_12190 PF00474 Sodium:solute symporter family A6E01_12200 PF00512 His Kinase A (phospho-acceptor) domain A6E01_12200 PF00672 HAMP domain A6E01_12200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6E01_12200 PF00072 Response regulator receiver domain A6E01_12200 PF01627 Hpt domain A6E01_12205 PF12832 MFS_1 like family A6E01_12220 PF13193 AMP-binding enzyme C-terminal domain A6E01_12220 PF16177 Acetyl-coenzyme A synthetase N-terminus A6E01_12220 PF00501 AMP-binding enzyme A6E01_12225 PF01220 Dehydroquinase class II A6E01_12230 PF00364 Biotin-requiring enzyme A6E01_12235 PF00289 Biotin carboxylase, N-terminal domain A6E01_12235 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A6E01_12235 PF02785 Biotin carboxylase C-terminal domain A6E01_12245 PF01207 Dihydrouridine synthase (Dus) A6E01_12250 PF02954 Bacterial regulatory protein, Fis family A6E01_12255 PF00892 EamA-like transporter family A6E01_12265 PF13411 MerR HTH family regulatory protein A6E01_12270 PF02142 MGS-like domain A6E01_12270 PF01808 AICARFT/IMPCHase bienzyme A6E01_12275 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain A6E01_12275 PF02843 Phosphoribosylglycinamide synthetase, C domain A6E01_12275 PF02844 Phosphoribosylglycinamide synthetase, N domain A6E01_12285 PF12833 Helix-turn-helix domain A6E01_12295 PF00216 Bacterial DNA-binding protein A6E01_12300 PF00571 CBS domain A6E01_12300 PF01595 Cyclin M transmembrane N-terminal domain A6E01_12305 PF04222 Protein of unknown function (DUF416) A6E01_12310 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A6E01_12315 PF00156 Phosphoribosyl transferase domain A6E01_12325 PF03755 YicC-like family, N-terminal region A6E01_12325 PF08340 Domain of unknown function (DUF1732) A6E01_12340 PF00625 Guanylate kinase A6E01_12345 PF01192 RNA polymerase Rpb6 A6E01_12350 PF02824 TGS domain A6E01_12350 PF04607 Region found in RelA / SpoT proteins A6E01_12350 PF13291 ACT domain A6E01_12355 PF12105 SpoU, rRNA methylase, C-terminal A6E01_12355 PF00588 SpoU rRNA Methylase family A6E01_12360 PF04002 RadC-like JAB domain A6E01_12365 PF02441 Flavoprotein A6E01_12365 PF04127 DNA / pantothenate metabolism flavoprotein A6E01_12370 PF00692 dUTPase A6E01_12375 PF00440 Bacterial regulatory proteins, tetR family A6E01_12380 PF03279 Bacterial lipid A biosynthesis acyltransferase A6E01_12385 PF03279 Bacterial lipid A biosynthesis acyltransferase A6E01_12390 PF01208 Uroporphyrinogen decarboxylase (URO-D) A6E01_12400 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ A6E01_12405 PF00623 RNA polymerase Rpb1, domain 2 A6E01_12405 PF04997 RNA polymerase Rpb1, domain 1 A6E01_12405 PF04983 RNA polymerase Rpb1, domain 3 A6E01_12405 PF04998 RNA polymerase Rpb1, domain 5 A6E01_12405 PF05000 RNA polymerase Rpb1, domain 4 A6E01_12410 PF00562 RNA polymerase Rpb2, domain 6 A6E01_12410 PF10385 RNA polymerase beta subunit external 1 domain A6E01_12410 PF04565 RNA polymerase Rpb2, domain 3 A6E01_12410 PF04563 RNA polymerase beta subunit A6E01_12410 PF04560 RNA polymerase Rpb2, domain 7 A6E01_12410 PF04561 RNA polymerase Rpb2, domain 2 A6E01_12415 PF00542 Ribosomal protein L7/L12 C-terminal domain A6E01_12415 PF16320 Ribosomal protein L7/L12 dimerisation domain A6E01_12420 PF00466 Ribosomal protein L10 A6E01_12425 PF00687 Ribosomal protein L1p/L10e family A6E01_12430 PF03946 Ribosomal protein L11, N-terminal domain A6E01_12430 PF00298 Ribosomal protein L11, RNA binding domain A6E01_12435 PF02357 Transcription termination factor nusG A6E01_12435 PF00467 KOW motif A6E01_12440 PF00584 SecE/Sec61-gamma subunits of protein translocation complex A6E01_12445 PF03144 Elongation factor Tu domain 2 A6E01_12445 PF00009 Elongation factor Tu GTP binding domain A6E01_12445 PF03143 Elongation factor Tu C-terminal domain A6E01_12470 PF00485 Phosphoribulokinase / Uridine kinase family A6E01_12475 PF03099 Biotin/lipoate A/B protein ligase family A6E01_12475 PF08279 HTH domain A6E01_12475 PF02237 Biotin protein ligase C terminal domain A6E01_12480 PF01565 FAD binding domain A6E01_12480 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain A6E01_12490 PF13091 PLD-like domain A6E01_12500 PF13358 DDE superfamily endonuclease A6E01_12560 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) A6E01_12565 PF01177 Asp/Glu/Hydantoin racemase A6E01_12580 PF00440 Bacterial regulatory proteins, tetR family A6E01_12590 PF01554 MatE A6E01_12595 PF00717 Peptidase S24-like A6E01_12595 PF01726 LexA DNA binding domain A6E01_12600 PF01219 Prokaryotic diacylglycerol kinase A6E01_12610 PF01040 UbiA prenyltransferase family A6E01_12615 PF04345 Chorismate lyase A6E01_12620 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease A6E01_12620 PF01694 Rhomboid family A6E01_12625 PF00581 Rhodanese-like domain A6E01_12630 PF04545 Sigma-70, region 4 A6E01_12630 PF00140 Sigma-70 factor, region 1.2 A6E01_12630 PF04542 Sigma-70 region 2 A6E01_12635 PF18075 FtsX extracellular domain A6E01_12640 PF00005 ABC transporter A6E01_12645 PF02881 SRP54-type protein, helical bundle domain A6E01_12645 PF00448 SRP54-type protein, GTPase domain A6E01_12685 PF13442 Cytochrome C oxidase, cbb3-type, subunit III A6E01_12690 PF13361 UvrD-like helicase C-terminal domain A6E01_12690 PF00580 UvrD/REP helicase N-terminal domain A6E01_12695 PF00440 Bacterial regulatory proteins, tetR family A6E01_12700 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A6E01_12705 PF00873 AcrB/AcrD/AcrF family A6E01_12710 PF04380 Membrane fusogenic activity A6E01_12715 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain A6E01_12715 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain A6E01_12720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_12720 PF03466 LysR substrate binding domain A6E01_12725 PF13276 HTH-like domain A6E01_12725 PF00665 Integrase core domain A6E01_12725 PF13333 Integrase core domain A6E01_12730 PF01527 Transposase A6E01_12745 PF13358 DDE superfamily endonuclease A6E01_12780 PF00175 Oxidoreductase NAD-binding domain A6E01_12785 PF00111 2Fe-2S iron-sulfur cluster binding domain A6E01_12785 PF00175 Oxidoreductase NAD-binding domain A6E01_12785 PF00970 Oxidoreductase FAD-binding domain A6E01_12790 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase A6E01_12800 PF07497 Rho termination factor, RNA-binding domain A6E01_12800 PF07498 Rho termination factor, N-terminal domain A6E01_12800 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A6E01_12805 PF00085 Thioredoxin A6E01_12810 PF00271 Helicase conserved C-terminal domain A6E01_12810 PF00270 DEAD/DEAH box helicase A6E01_12815 PF02541 Ppx/GppA phosphatase family A6E01_12820 PF00591 Glycosyl transferase family, a/b domain A6E01_12820 PF02885 Glycosyl transferase family, helical bundle domain A6E01_12825 PF02592 Putative vitamin uptake transporter A6E01_12835 PF00270 DEAD/DEAH box helicase A6E01_12835 PF09382 RQC domain A6E01_12835 PF16124 RecQ zinc-binding A6E01_12835 PF00570 HRDC domain A6E01_12835 PF00271 Helicase conserved C-terminal domain A6E01_12840 PF00892 EamA-like transporter family A6E01_12845 PF01810 LysE type translocator A6E01_12855 PF01914 MarC family integral membrane protein A6E01_12860 PF00580 UvrD/REP helicase N-terminal domain A6E01_12860 PF13361 UvrD-like helicase C-terminal domain A6E01_12870 PF05114 Protein of unknown function (DUF692) A6E01_12890 PF01321 Creatinase/Prolidase N-terminal domain A6E01_12890 PF00557 Metallopeptidase family M24 A6E01_12895 PF04055 Radical SAM superfamily A6E01_12895 PF06968 Biotin and Thiamin Synthesis associated domain A6E01_12910 PF00899 ThiF family A6E01_12915 PF02581 Thiamine monophosphate synthase A6E01_12920 PF02537 CrcB-like protein, Camphor Resistance (CrcB) A6E01_12960 PF12724 Flavodoxin domain A6E01_12965 PF02386 Cation transport protein A6E01_12970 PF09186 Domain of unknown function (DUF1949) A6E01_12970 PF01205 Uncharacterized protein family UPF0029 A6E01_12975 PF00378 Enoyl-CoA hydratase/isomerase A6E01_12975 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain A6E01_12975 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain A6E01_12980 PF00108 Thiolase, N-terminal domain A6E01_12980 PF02803 Thiolase, C-terminal domain A6E01_12985 PF00107 Zinc-binding dehydrogenase A6E01_12985 PF08240 Alcohol dehydrogenase GroES-like domain A6E01_12990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_12990 PF03466 LysR substrate binding domain A6E01_12995 PF01206 Sulfurtransferase TusA A6E01_13000 PF01169 Uncharacterized protein family UPF0016 A6E01_13015 PF00155 Aminotransferase class I and II A6E01_13030 PF00072 Response regulator receiver domain A6E01_13030 PF00486 Transcriptional regulatory protein, C terminal A6E01_13035 PF00011 Hsp20/alpha crystallin family A6E01_13040 PF00986 DNA gyrase B subunit, carboxyl terminus A6E01_13040 PF01751 Toprim domain A6E01_13040 PF00204 DNA gyrase B A6E01_13040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6E01_13040 PF18053 DNA gyrase B subunit insert domain A6E01_13050 PF02768 DNA polymerase III beta subunit, C-terminal domain A6E01_13050 PF02767 DNA polymerase III beta subunit, central domain A6E01_13050 PF00712 DNA polymerase III beta subunit, N-terminal domain A6E01_13060 PF18607 ParA helix turn helix domain A6E01_13060 PF13614 AAA domain A6E01_13065 PF08775 ParB family A6E01_13065 PF02195 ParB-like nuclease domain A6E01_13075 PF05127 Helicase A6E01_13075 PF13718 GNAT acetyltransferase 2 A6E01_13085 PF00664 ABC transporter transmembrane region A6E01_13085 PF00005 ABC transporter A6E01_13085 PF03412 Peptidase C39 family A6E01_13100 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A6E01_13100 PF00529 HlyD membrane-fusion protein of T1SS A6E01_13105 PF01243 Pyridoxamine 5'-phosphate oxidase A6E01_13105 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region A6E01_13115 PF07715 TonB-dependent Receptor Plug Domain A6E01_13115 PF00593 TonB dependent receptor A6E01_13120 PF01619 Proline dehydrogenase A6E01_13120 PF14850 DNA-binding domain of Proline dehydrogenase A6E01_13120 PF18327 Proline utilization A proline dehydrogenase N-terminal domain A6E01_13120 PF00171 Aldehyde dehydrogenase family A6E01_13130 PF01734 Patatin-like phospholipase A6E01_13135 PF03649 Uncharacterised protein family (UPF0014) A6E01_13140 PF00924 Mechanosensitive ion channel A6E01_13145 PF03466 LysR substrate binding domain A6E01_13145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_13150 PF02417 Chromate transporter A6E01_13165 PF08450 SMP-30/Gluconolactonase/LRE-like region A6E01_13170 PF02627 Carboxymuconolactone decarboxylase family A6E01_13175 PF00563 EAL domain A6E01_13175 PF01590 GAF domain A6E01_13175 PF00990 Diguanylate cyclase, GGDEF domain A6E01_13175 PF00360 Phytochrome region A6E01_13180 PF07690 Major Facilitator Superfamily A6E01_13185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_13185 PF03466 LysR substrate binding domain A6E01_13190 PF12706 Beta-lactamase superfamily domain A6E01_13195 PF00440 Bacterial regulatory proteins, tetR family A6E01_13195 PF08362 YcdC-like protein, C-terminal region A6E01_13200 PF00793 DAHP synthetase I family A6E01_13210 PF04996 Succinylarginine dihydrolase A6E01_13215 PF04958 Arginine N-succinyltransferase beta subunit A6E01_13220 PF00958 GMP synthase C terminal domain A6E01_13220 PF02540 NAD synthase A6E01_13220 PF00117 Glutamine amidotransferase class-I A6E01_13225 PF00005 ABC transporter A6E01_13225 PF00664 ABC transporter transmembrane region A6E01_13235 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) A6E01_13235 PF00128 Alpha amylase, catalytic domain A6E01_13240 PF02264 LamB porin A6E01_13250 PF00128 Alpha amylase, catalytic domain A6E01_13250 PF17999 Pullulanase N1-terminal domain A6E01_13250 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) A6E01_13265 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF A6E01_13270 PF06251 Capsule biosynthesis GfcC A6E01_13275 PF06082 Exopolysaccharide biosynthesis protein YbjH A6E01_13300 PF02805 Metal binding domain of Ada A6E01_13300 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain A6E01_13300 PF12833 Helix-turn-helix domain A6E01_13300 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain A6E01_13315 PF01548 Transposase A6E01_13315 PF02371 Transposase IS116/IS110/IS902 family A6E01_13320 PF00924 Mechanosensitive ion channel A6E01_13320 PF05552 Conserved TM helix A6E01_13325 PF02790 Cytochrome C oxidase subunit II, transmembrane domain A6E01_13325 PF00116 Cytochrome C oxidase subunit II, periplasmic domain A6E01_13330 PF00115 Cytochrome C and Quinol oxidase polypeptide I A6E01_13335 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 A6E01_13340 PF00510 Cytochrome c oxidase subunit III A6E01_13360 PF02628 Cytochrome oxidase assembly protein A6E01_13365 PF01040 UbiA prenyltransferase family A6E01_13375 PF00245 Alkaline phosphatase A6E01_13390 PF16884 N-terminal domain of oxidoreductase A6E01_13390 PF00107 Zinc-binding dehydrogenase A6E01_13395 PF00465 Iron-containing alcohol dehydrogenase A6E01_13405 PF00376 MerR family regulatory protein A6E01_13405 PF09278 MerR, DNA binding A6E01_13415 PF13302 Acetyltransferase (GNAT) domain A6E01_13425 PF03109 ABC1 family A6E01_13430 PF00199 Catalase A6E01_13430 PF06628 Catalase-related immune-responsive A6E01_13440 PF00378 Enoyl-CoA hydratase/isomerase A6E01_13445 PF14765 Polyketide synthase dehydratase A6E01_13445 PF00550 Phosphopantetheine attachment site A6E01_13445 PF08240 Alcohol dehydrogenase GroES-like domain A6E01_13445 PF00698 Acyl transferase domain A6E01_13445 PF02801 Beta-ketoacyl synthase, C-terminal domain A6E01_13445 PF00109 Beta-ketoacyl synthase, N-terminal domain A6E01_13445 PF16197 Ketoacyl-synthetase C-terminal extension A6E01_13445 PF08659 KR domain A6E01_13445 PF00107 Zinc-binding dehydrogenase A6E01_13450 PF03466 LysR substrate binding domain A6E01_13450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_13460 PF01645 Conserved region in glutamate synthase A6E01_13465 PF02574 Homocysteine S-methyltransferase A6E01_13465 PF00809 Pterin binding enzyme A6E01_13465 PF02965 Vitamin B12 dependent methionine synthase, activation domain A6E01_13465 PF02607 B12 binding domain A6E01_13465 PF02310 B12 binding domain A6E01_13480 PF01852 START domain A6E01_13490 PF01966 HD domain A6E01_13500 PF00497 Bacterial extracellular solute-binding proteins, family 3 A6E01_13505 PF00155 Aminotransferase class I and II A6E01_13510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_13510 PF03466 LysR substrate binding domain A6E01_13520 PF00144 Beta-lactamase A6E01_13560 PF01915 Glycosyl hydrolase family 3 C-terminal domain A6E01_13560 PF00933 Glycosyl hydrolase family 3 N terminal domain A6E01_13560 PF14310 Fibronectin type III-like domain A6E01_13565 PF02311 AraC-like ligand binding domain A6E01_13565 PF12833 Helix-turn-helix domain A6E01_13570 PF04542 Sigma-70 region 2 A6E01_13570 PF08281 Sigma-70, region 4 A6E01_13605 PF00005 ABC transporter A6E01_13605 PF08402 TOBE domain A6E01_13615 PF09347 Domain of unknown function (DUF1989) A6E01_13620 PF00289 Biotin carboxylase, N-terminal domain A6E01_13620 PF02785 Biotin carboxylase C-terminal domain A6E01_13620 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A6E01_13620 PF00364 Biotin-requiring enzyme A6E01_13620 PF00289 Biotin carboxylase, N-terminal domain A6E01_13620 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A6E01_13620 PF02785 Biotin carboxylase C-terminal domain A6E01_13620 PF00364 Biotin-requiring enzyme A6E01_13625 PF01425 Amidase A6E01_13635 PF13519 von Willebrand factor type A domain A6E01_13635 PF07584 Aerotolerance regulator N-terminal A6E01_13640 PF13519 von Willebrand factor type A domain A6E01_13650 PF01882 Protein of unknown function DUF58 A6E01_13655 PF07726 ATPase family associated with various cellular activities (AAA) A6E01_13655 PF17863 AAA lid domain A6E01_13665 PF03553 Na+/H+ antiporter family A6E01_13670 PF00120 Glutamine synthetase, catalytic domain A6E01_13675 PF07722 Peptidase C26 A6E01_13680 PF01381 Helix-turn-helix A6E01_13680 PF07883 Cupin domain A6E01_13685 PF00171 Aldehyde dehydrogenase family A6E01_13690 PF01266 FAD dependent oxidoreductase A6E01_13695 PF00795 Carbon-nitrogen hydrolase A6E01_13700 PF04371 Porphyromonas-type peptidyl-arginine deiminase A6E01_13705 PF00171 Aldehyde dehydrogenase family A6E01_13710 PF00202 Aminotransferase class-III A6E01_13735 PF00248 Aldo/keto reductase family A6E01_13740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_13740 PF03466 LysR substrate binding domain A6E01_13745 PF07963 Prokaryotic N-terminal methylation motif A6E01_13745 PF00114 Pilin (bacterial filament) A6E01_13755 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin A6E01_13760 PF07969 Amidohydrolase family A6E01_13790 PF07690 Major Facilitator Superfamily A6E01_13795 PF13442 Cytochrome C oxidase, cbb3-type, subunit III A6E01_13795 PF00034 Cytochrome c A6E01_13805 PF00115 Cytochrome C and Quinol oxidase polypeptide I A6E01_13815 PF04324 BFD-like [2Fe-2S] binding domain A6E01_13815 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A6E01_13815 PF01568 Molydopterin dinucleotide binding domain A6E01_13815 PF00384 Molybdopterin oxidoreductase A6E01_13820 PF14824 Sirohaem biosynthesis protein central A6E01_13820 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A6E01_13820 PF10414 Sirohaem synthase dimerisation region A6E01_13825 PF04324 BFD-like [2Fe-2S] binding domain A6E01_13825 PF18267 Rubredoxin NAD+ reductase C-terminal domain A6E01_13825 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6E01_13825 PF01077 Nitrite and sulphite reductase 4Fe-4S domain A6E01_13825 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain A6E01_13835 PF07690 Major Facilitator Superfamily A6E01_13840 PF00069 Protein kinase domain A6E01_13840 PF03793 PASTA domain A6E01_13865 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD A6E01_13880 PF01235 Sodium:alanine symporter family A6E01_13905 PF13007 Transposase C of IS166 homeodomain A6E01_13905 PF13817 IS66 C-terminal element A6E01_13905 PF03050 Transposase IS66 family A6E01_13905 PF13005 zinc-finger binding domain of transposase IS66 A6E01_13920 PF01609 Transposase DDE domain A6E01_13920 PF13808 DDE_Tnp_1-associated A6E01_13930 PF08787 Alginate lyase A6E01_13945 PF13737 Transposase DDE domain A6E01_13950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_13950 PF03466 LysR substrate binding domain A6E01_13965 PF02347 Glycine cleavage system P-protein A6E01_13970 PF01597 Glycine cleavage H-protein A6E01_13980 PF08669 Glycine cleavage T-protein C-terminal barrel domain A6E01_13980 PF01571 Aminomethyltransferase folate-binding domain A6E01_13990 PF01557 Fumarylacetoacetate (FAA) hydrolase family A6E01_14000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_14000 PF03466 LysR substrate binding domain A6E01_14025 PF00313 'Cold-shock' DNA-binding domain A6E01_14035 PF09285 Elongation factor P, C-terminal A6E01_14035 PF08207 Elongation factor P (EF-P) KOW-like domain A6E01_14035 PF01132 Elongation factor P (EF-P) OB domain A6E01_14045 PF12804 MobA-like NTP transferase domain A6E01_14045 PF00132 Bacterial transferase hexapeptide (six repeats) A6E01_14055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_14055 PF03466 LysR substrate binding domain A6E01_14060 PF00012 Hsp70 protein A6E01_14070 PF01618 MotA/TolQ/ExbB proton channel family A6E01_14075 PF01618 MotA/TolQ/ExbB proton channel family A6E01_14080 PF02472 Biopolymer transport protein ExbD/TolR A6E01_14085 PF03544 Gram-negative bacterial TonB protein C-terminal A6E01_14100 PF01527 Transposase A6E01_14105 PF13276 HTH-like domain A6E01_14105 PF13683 Integrase core domain A6E01_14120 PF13416 Bacterial extracellular solute-binding protein A6E01_14125 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_14130 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_14135 PF00005 ABC transporter A6E01_14135 PF08402 TOBE domain A6E01_14140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_14140 PF03466 LysR substrate binding domain A6E01_14155 PF13276 HTH-like domain A6E01_14155 PF00665 Integrase core domain A6E01_14155 PF13333 Integrase core domain A6E01_14170 PF13817 IS66 C-terminal element A6E01_14170 PF13007 Transposase C of IS166 homeodomain A6E01_14170 PF13005 zinc-finger binding domain of transposase IS66 A6E01_14170 PF03050 Transposase IS66 family A6E01_14185 PF02811 PHP domain A6E01_14200 PF01527 Transposase A6E01_14205 PF13276 HTH-like domain A6E01_14205 PF13333 Integrase core domain A6E01_14205 PF00665 Integrase core domain A6E01_14210 PF00860 Permease family A6E01_14230 PF00128 Alpha amylase, catalytic domain A6E01_14240 PF02371 Transposase IS116/IS110/IS902 family A6E01_14240 PF01548 Transposase A6E01_14245 PF00248 Aldo/keto reductase family A6E01_14255 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A6E01_14260 PF00873 AcrB/AcrD/AcrF family A6E01_14265 PF01565 FAD binding domain A6E01_14265 PF02913 FAD linked oxidases, C-terminal domain A6E01_14270 PF01070 FMN-dependent dehydrogenase A6E01_14275 PF02652 L-lactate permease A6E01_14280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_14280 PF03466 LysR substrate binding domain A6E01_14285 PF03466 LysR substrate binding domain A6E01_14285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_14295 PF00795 Carbon-nitrogen hydrolase A6E01_14315 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) A6E01_14330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_14330 PF03466 LysR substrate binding domain A6E01_14340 PF03480 Bacterial extracellular solute-binding protein, family 7 A6E01_14345 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component A6E01_14350 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component A6E01_14355 PF02954 Bacterial regulatory protein, Fis family A6E01_14355 PF00072 Response regulator receiver domain A6E01_14355 PF00158 Sigma-54 interaction domain A6E01_14360 PF02743 Cache domain A6E01_14360 PF00512 His Kinase A (phospho-acceptor) domain A6E01_14360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6E01_14375 PF01541 GIY-YIG catalytic domain A6E01_14380 PF13407 Periplasmic binding protein domain A6E01_14385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6E01_14385 PF00072 Response regulator receiver domain A6E01_14385 PF09308 LuxQ, periplasmic A6E01_14385 PF00512 His Kinase A (phospho-acceptor) domain A6E01_14395 PF00106 short chain dehydrogenase A6E01_14400 PF01266 FAD dependent oxidoreductase A6E01_14400 PF16901 C-terminal domain of alpha-glycerophosphate oxidase A6E01_14405 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) A6E01_14410 PF12805 FUSC-like inner membrane protein yccS A6E01_14415 PF12462 DNA helicase IV / RNA helicase N terminal A6E01_14415 PF00580 UvrD/REP helicase N-terminal domain A6E01_14415 PF13361 UvrD-like helicase C-terminal domain A6E01_14430 PF02142 MGS-like domain A6E01_14435 PF06508 Queuosine biosynthesis protein QueC A6E01_14470 PF13593 SBF-like CPA transporter family (DUF4137) A6E01_14475 PF00005 ABC transporter A6E01_14480 PF01032 FecCD transport family A6E01_14490 PF02472 Biopolymer transport protein ExbD/TolR A6E01_14495 PF01618 MotA/TolQ/ExbB proton channel family A6E01_14500 PF03544 Gram-negative bacterial TonB protein C-terminal A6E01_14505 PF04055 Radical SAM superfamily A6E01_14510 PF06228 Haem utilisation ChuX/HutX A6E01_14515 PF01243 Pyridoxamine 5'-phosphate oxidase A6E01_14520 PF07715 TonB-dependent Receptor Plug Domain A6E01_14520 PF00593 TonB dependent receptor A6E01_14525 PF00664 ABC transporter transmembrane region A6E01_14525 PF00005 ABC transporter A6E01_14530 PF01914 MarC family integral membrane protein A6E01_14545 PF01527 Transposase A6E01_14550 PF13276 HTH-like domain A6E01_14550 PF13683 Integrase core domain A6E01_14560 PF03264 NapC/NirT cytochrome c family, N-terminal region A6E01_14565 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) A6E01_14570 PF00384 Molybdopterin oxidoreductase A6E01_14570 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A6E01_14570 PF01568 Molydopterin dinucleotide binding domain A6E01_14575 PF03927 NapD protein A6E01_14580 PF07730 Histidine kinase A6E01_14580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6E01_14580 PF00672 HAMP domain A6E01_14580 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term A6E01_14585 PF00196 Bacterial regulatory proteins, luxR family A6E01_14585 PF00072 Response regulator receiver domain A6E01_14590 PF07311 Dodecin A6E01_14595 PF00923 Transaldolase/Fructose-6-phosphate aldolase A6E01_14600 PF00899 ThiF family A6E01_14605 PF00994 Probable molybdopterin binding domain A6E01_14605 PF03453 MoeA N-terminal region (domain I and II) A6E01_14605 PF03454 MoeA C-terminal region (domain IV) A6E01_14610 PF01227 GTP cyclohydrolase I A6E01_14620 PF02492 CobW/HypB/UreG, nucleotide-binding domain A6E01_14620 PF07683 Cobalamin synthesis protein cobW C-terminal domain A6E01_14630 PF01926 50S ribosome-binding GTPase A6E01_14635 PF01609 Transposase DDE domain A6E01_14635 PF13808 DDE_Tnp_1-associated A6E01_14640 PF00106 short chain dehydrogenase A6E01_14645 PF02311 AraC-like ligand binding domain A6E01_14645 PF12833 Helix-turn-helix domain A6E01_14650 PF00933 Glycosyl hydrolase family 3 N terminal domain A6E01_14650 PF01915 Glycosyl hydrolase family 3 C-terminal domain A6E01_14650 PF14310 Fibronectin type III-like domain A6E01_14655 PF00270 DEAD/DEAH box helicase A6E01_14655 PF00271 Helicase conserved C-terminal domain A6E01_14675 PF01184 GPR1/FUN34/yaaH family A6E01_14680 PF13520 Amino acid permease A6E01_14690 PF02335 Cytochrome c552 A6E01_14700 PF13247 4Fe-4S dicluster domain A6E01_14705 PF03916 Polysulphide reductase, NrfD A6E01_14710 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal A6E01_14710 PF01578 Cytochrome C assembly protein A6E01_14715 PF03918 Cytochrome C biogenesis protein A6E01_14725 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A6E01_14730 PF00884 Sulfatase A6E01_14735 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A6E01_14740 PF00873 AcrB/AcrD/AcrF family A6E01_14745 PF00884 Sulfatase A6E01_14745 PF16385 Domain of unknown function A6E01_14755 PF17863 AAA lid domain A6E01_14755 PF07726 ATPase family associated with various cellular activities (AAA) A6E01_14785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_14785 PF03466 LysR substrate binding domain A6E01_14800 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase A6E01_14805 PF03781 Sulfatase-modifying factor enzyme 1 A6E01_14810 PF13186 Iron-sulfur cluster-binding domain A6E01_14810 PF04055 Radical SAM superfamily A6E01_14825 PF07690 Major Facilitator Superfamily A6E01_14830 PF00106 short chain dehydrogenase A6E01_14840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_14840 PF03466 LysR substrate binding domain A6E01_14870 PF01256 Carbohydrate kinase A6E01_14870 PF03853 YjeF-related protein N-terminus A6E01_14895 PF03167 Uracil DNA glycosylase superfamily A6E01_14910 PF01970 Tripartite tricarboxylate transporter TctA family A6E01_14915 PF12431 Transcriptional regulator A6E01_14915 PF00072 Response regulator receiver domain A6E01_14920 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain A6E01_14920 PF17203 Single cache domain 3 A6E01_14920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6E01_14920 PF00989 PAS fold A6E01_14925 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_14930 PF00497 Bacterial extracellular solute-binding proteins, family 3 A6E01_14935 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_14940 PF00005 ABC transporter A6E01_14945 PF03466 LysR substrate binding domain A6E01_14945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_14955 PF07244 Surface antigen variable number repeat A6E01_14955 PF17243 POTRA domain TamA domain 1 A6E01_14955 PF01103 Surface antigen A6E01_14960 PF06224 Winged helix DNA-binding domain A6E01_14975 PF13091 PLD-like domain A6E01_14980 PF00135 Carboxylesterase family A6E01_14995 PF00909 Ammonium Transporter Family A6E01_15005 PF01081 KDPG and KHG aldolase A6E01_15010 PF00294 pfkB family carbohydrate kinase A6E01_15015 PF07883 Cupin domain A6E01_15020 PF07940 Heparinase II/III-like protein A6E01_15020 PF05426 Alginate lyase A6E01_15025 PF07940 Heparinase II/III-like protein A6E01_15025 PF05426 Alginate lyase A6E01_15040 PF00392 Bacterial regulatory proteins, gntR family A6E01_15040 PF07729 FCD domain A6E01_15045 PF00392 Bacterial regulatory proteins, gntR family A6E01_15045 PF07729 FCD domain A6E01_15050 PF00571 CBS domain A6E01_15055 PF11490 DNA polymerase III polC-type N-terminus II A6E01_15055 PF00929 Exonuclease A6E01_15055 PF07733 Bacterial DNA polymerase III alpha NTPase domain A6E01_15055 PF02811 PHP domain A6E01_15055 PF17657 Bacterial DNA polymerase III alpha subunit finger domain A6E01_15055 PF14579 Helix-hairpin-helix motif A6E01_15090 PF13276 HTH-like domain A6E01_15090 PF00665 Integrase core domain A6E01_15090 PF13333 Integrase core domain A6E01_15110 PF04794 YdjC-like protein A6E01_15115 PF00474 Sodium:solute symporter family A6E01_15125 PF00474 Sodium:solute symporter family A6E01_15145 PF00881 Nitroreductase family A6E01_15150 PF01548 Transposase A6E01_15150 PF02371 Transposase IS116/IS110/IS902 family A6E01_15155 PF00293 NUDIX domain A6E01_15160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_15160 PF03466 LysR substrate binding domain A6E01_15180 PF08787 Alginate lyase A6E01_15190 PF00106 short chain dehydrogenase A6E01_15195 PF00072 Response regulator receiver domain A6E01_15200 PF00672 HAMP domain A6E01_15200 PF00072 Response regulator receiver domain A6E01_15200 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) A6E01_15200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6E01_15200 PF00512 His Kinase A (phospho-acceptor) domain A6E01_15200 PF01627 Hpt domain A6E01_15215 PF08787 Alginate lyase A6E01_15220 PF08787 Alginate lyase A6E01_15230 PF00248 Aldo/keto reductase family A6E01_15235 PF00873 AcrB/AcrD/AcrF family A6E01_15245 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A6E01_15250 PF00440 Bacterial regulatory proteins, tetR family A6E01_15250 PF13977 BetI-type transcriptional repressor, C-terminal A6E01_15260 PF08787 Alginate lyase A6E01_15265 PF02321 Outer membrane efflux protein A6E01_15270 PF00873 AcrB/AcrD/AcrF family A6E01_15280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_15280 PF03466 LysR substrate binding domain A6E01_15290 PF13533 Biotin-lipoyl like A6E01_15305 PF13091 PLD-like domain A6E01_15320 PF08543 Phosphomethylpyrimidine kinase A6E01_15325 PF00005 ABC transporter A6E01_15330 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_15335 PF09084 NMT1/THI5 like A6E01_15340 PF09084 NMT1/THI5 like A6E01_15345 PF03070 TENA/THI-4/PQQC family A6E01_15350 PF02110 Hydroxyethylthiazole kinase family A6E01_15355 PF02581 Thiamine monophosphate synthase A6E01_15370 PF01274 Malate synthase A6E01_15375 PF00463 Isocitrate lyase family A6E01_15385 PF00171 Aldehyde dehydrogenase family A6E01_15395 PF00043 Glutathione S-transferase, C-terminal domain A6E01_15395 PF02798 Glutathione S-transferase, N-terminal domain A6E01_15405 PF00465 Iron-containing alcohol dehydrogenase A6E01_15410 PF12833 Helix-turn-helix domain A6E01_15415 PF08206 Ribonuclease B OB domain A6E01_15415 PF00575 S1 RNA binding domain A6E01_15415 PF00773 RNB domain A6E01_15420 PF00271 Helicase conserved C-terminal domain A6E01_15420 PF03880 DbpA RNA binding domain A6E01_15420 PF00270 DEAD/DEAH box helicase A6E01_15425 PF00871 Acetokinase family A6E01_15430 PF02810 SEC-C motif A6E01_15430 PF01043 SecA preprotein cross-linking domain A6E01_15430 PF07516 SecA Wing and Scaffold domain A6E01_15430 PF07517 SecA DEAD-like domain A6E01_15440 PF00999 Sodium/hydrogen exchanger family A6E01_15440 PF02254 TrkA-N domain A6E01_15445 PF08543 Phosphomethylpyrimidine kinase A6E01_15455 PF03466 LysR substrate binding domain A6E01_15455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_15460 PF01810 LysE type translocator A6E01_15465 PF01844 HNH endonuclease A6E01_15470 PF00962 Adenosine/AMP deaminase A6E01_15480 PF13333 Integrase core domain A6E01_15480 PF13276 HTH-like domain A6E01_15480 PF00665 Integrase core domain A6E01_15495 PF04324 BFD-like [2Fe-2S] binding domain A6E01_15495 PF01077 Nitrite and sulphite reductase 4Fe-4S domain A6E01_15495 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain A6E01_15495 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6E01_15495 PF18267 Rubredoxin NAD+ reductase C-terminal domain A6E01_15500 PF13806 Rieske-like [2Fe-2S] domain A6E01_15505 PF01226 Formate/nitrite transporter A6E01_15510 PF10414 Sirohaem synthase dimerisation region A6E01_15510 PF14824 Sirohaem biosynthesis protein central A6E01_15510 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A6E01_15530 PF02397 Bacterial sugar transferase A6E01_15535 PF00535 Glycosyl transferase family 2 A6E01_15540 PF13439 Glycosyltransferase Family 4 A6E01_15540 PF00534 Glycosyl transferases group 1 A6E01_15545 PF00132 Bacterial transferase hexapeptide (six repeats) A6E01_15580 PF07726 ATPase family associated with various cellular activities (AAA) A6E01_15580 PF17863 AAA lid domain A6E01_15600 PF00665 Integrase core domain A6E01_15605 PF01527 Transposase A6E01_15610 PF01609 Transposase DDE domain A6E01_15610 PF13808 DDE_Tnp_1-associated A6E01_15620 PF00440 Bacterial regulatory proteins, tetR family A6E01_15660 PF07690 Major Facilitator Superfamily A6E01_15665 PF01047 MarR family A6E01_15675 PF01244 Membrane dipeptidase (Peptidase family M19) A6E01_15685 PF11471 Maltoporin periplasmic N-terminal extension A6E01_15685 PF02264 LamB porin A6E01_15690 PF00356 Bacterial regulatory proteins, lacI family A6E01_15695 PF00367 phosphotransferase system, EIIB A6E01_15695 PF02378 Phosphotransferase system, EIIC A6E01_15700 PF00294 pfkB family carbohydrate kinase A6E01_15705 PF08244 Glycosyl hydrolases family 32 C terminal A6E01_15705 PF00251 Glycosyl hydrolases family 32 N-terminal domain A6E01_15710 PF13737 Transposase DDE domain A6E01_15720 PF00135 Carboxylesterase family A6E01_15725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_15725 PF03466 LysR substrate binding domain A6E01_15730 PF00005 ABC transporter A6E01_15755 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) A6E01_15770 PF08521 Two-component sensor kinase N-terminal A6E01_15770 PF00512 His Kinase A (phospho-acceptor) domain A6E01_15770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6E01_15775 PF00072 Response regulator receiver domain A6E01_15775 PF00486 Transcriptional regulatory protein, C terminal A6E01_15795 PF00501 AMP-binding enzyme A6E01_15810 PF03591 AzlC protein A6E01_15815 PF08671 Anti-repressor SinI A6E01_15815 PF01381 Helix-turn-helix A6E01_15840 PF00246 Zinc carboxypeptidase A6E01_15840 PF18027 Cytosolic carboxypeptidase N-terminal domain A6E01_15845 PF01554 MatE A6E01_15850 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A6E01_15875 PF00132 Bacterial transferase hexapeptide (six repeats) A6E01_15875 PF12464 Maltose acetyltransferase A6E01_15895 PF13439 Glycosyltransferase Family 4 A6E01_15895 PF00534 Glycosyl transferases group 1 A6E01_15910 PF13737 Transposase DDE domain A6E01_15925 PF13439 Glycosyltransferase Family 4 A6E01_15925 PF00534 Glycosyl transferases group 1 A6E01_15930 PF02954 Bacterial regulatory protein, Fis family A6E01_15930 PF00072 Response regulator receiver domain A6E01_15930 PF00158 Sigma-54 interaction domain A6E01_15955 PF01740 STAS domain A6E01_15960 PF00072 Response regulator receiver domain A6E01_15960 PF09308 LuxQ, periplasmic A6E01_15960 PF00512 His Kinase A (phospho-acceptor) domain A6E01_15960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A6E01_15975 PF13276 HTH-like domain A6E01_15975 PF13683 Integrase core domain A6E01_15980 PF01527 Transposase A6E01_15990 PF13419 Haloacid dehalogenase-like hydrolase A6E01_15995 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase A6E01_15995 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A6E01_16005 PF00294 pfkB family carbohydrate kinase A6E01_16020 PF13419 Haloacid dehalogenase-like hydrolase A6E01_16030 PF00141 Peroxidase A6E01_16045 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III A6E01_16045 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal A6E01_16055 PF01915 Glycosyl hydrolase family 3 C-terminal domain A6E01_16055 PF00933 Glycosyl hydrolase family 3 N terminal domain A6E01_16055 PF14310 Fibronectin type III-like domain A6E01_16060 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A6E01_16060 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6E01_16070 PF04143 Sulphur transport A6E01_16085 PF03477 ATP cone domain A6E01_16085 PF13597 Anaerobic ribonucleoside-triphosphate reductase A6E01_16095 PF00155 Aminotransferase class I and II A6E01_16100 PF18030 RimK PreATP-grasp domain A6E01_16100 PF08443 RimK-like ATP-grasp domain A6E01_16110 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_16115 PF03459 TOBE domain A6E01_16115 PF00005 ABC transporter A6E01_16135 PF05222 Alanine dehydrogenase/PNT, N-terminal domain A6E01_16135 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch A6E01_16135 PF01262 Alanine dehydrogenase/PNT, C-terminal domain A6E01_16140 PF02233 NAD(P) transhydrogenase beta subunit A6E01_16150 PF00486 Transcriptional regulatory protein, C terminal A6E01_16150 PF00072 Response regulator receiver domain A6E01_16175 PF17954 Quercetinase C-terminal cupin domain A6E01_16175 PF02678 Pirin A6E01_16180 PF03466 LysR substrate binding domain A6E01_16180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_16185 PF02525 Flavodoxin-like fold A6E01_16190 PF00860 Permease family A6E01_16195 PF01253 Translation initiation factor SUI1 A6E01_16205 PF01820 D-ala D-ala ligase N-terminus A6E01_16205 PF07478 D-ala D-ala ligase C-terminus A6E01_16215 PF13607 Succinyl-CoA ligase like flavodoxin domain A6E01_16215 PF13380 CoA binding domain A6E01_16215 PF00583 Acetyltransferase (GNAT) family A6E01_16220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_16220 PF03466 LysR substrate binding domain A6E01_16225 PF16363 GDP-mannose 4,6 dehydratase A6E01_16230 PF03746 LamB/YcsF family A6E01_16235 PF02682 Carboxyltransferase domain, subdomain C and D A6E01_16250 PF00005 ABC transporter A6E01_16255 PF13472 GDSL-like Lipase/Acylhydrolase family A6E01_16260 PF07055 Enoyl reductase FAD binding domain A6E01_16260 PF12241 Trans-2-enoyl-CoA reductase catalytic region A6E01_16260 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase A6E01_16265 PF00990 Diguanylate cyclase, GGDEF domain A6E01_16265 PF03707 Bacterial signalling protein N terminal repeat A6E01_16265 PF00563 EAL domain A6E01_16280 PF05762 VWA domain containing CoxE-like protein A6E01_16285 PF17868 AAA lid domain A6E01_16285 PF12592 Protein of unknown function (DUF3763) A6E01_16285 PF07728 AAA domain (dynein-related subfamily) A6E01_16290 PF00293 NUDIX domain A6E01_16295 PF01212 Beta-eliminating lyase A6E01_16300 PF01548 Transposase A6E01_16300 PF02371 Transposase IS116/IS110/IS902 family A6E01_16305 PF00270 DEAD/DEAH box helicase A6E01_16305 PF00271 Helicase conserved C-terminal domain A6E01_16310 PF04336 Acyl carrier protein phosphodiesterase A6E01_16320 PF01554 MatE A6E01_16335 PF01569 PAP2 superfamily A6E01_16340 PF00850 Histone deacetylase domain A6E01_16345 PF00270 DEAD/DEAH box helicase A6E01_16345 PF00271 Helicase conserved C-terminal domain A6E01_16350 PF11756 Nitrous oxide-stimulated promoter A6E01_16355 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A6E01_16360 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_16365 PF12911 N-terminal TM domain of oligopeptide transport permease C A6E01_16365 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_16375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A6E01_16375 PF00005 ABC transporter A6E01_16380 PF02696 Uncharacterized ACR, YdiU/UPF0061 family A6E01_16395 PF00529 HlyD membrane-fusion protein of T1SS A6E01_16395 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A6E01_16410 PF12793 Sugar transport-related sRNA regulator N-term A6E01_16410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A6E01_16420 PF03061 Thioesterase superfamily A6E01_16430 PF03831 PhnA domain A6E01_16430 PF08274 PhnA Zinc-Ribbon A6E01_16435 PF00999 Sodium/hydrogen exchanger family A6E01_16435 PF03471 Transporter associated domain A6E01_16435 PF02080 TrkA-C domain A6E01_16445 PF16200 C-terminal region of band_7 A6E01_16445 PF01145 SPFH domain / Band 7 family A6E01_16460 PF00781 Diacylglycerol kinase catalytic domain A6E01_16475 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A6E01_16475 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6E01_16490 PF13609 Gram-negative porin A6E01_16495 PF03222 Tryptophan/tyrosine permease family A6E01_16500 PF03313 Serine dehydratase alpha chain A6E01_16500 PF03315 Serine dehydratase beta chain A6E01_16510 PF00497 Bacterial extracellular solute-binding proteins, family 3 A6E01_16520 PF00149 Calcineurin-like phosphoesterase A6E01_16520 PF02872 5'-nucleotidase, C-terminal domain A6E01_16525 PF11398 Protein of unknown function (DUF2813) A6E01_16535 PF04264 YceI-like domain A6E01_16540 PF01292 Prokaryotic cytochrome b561 A6E01_16560 PF03616 Sodium/glutamate symporter A6E01_16565 PF12848 ABC transporter A6E01_16565 PF00005 ABC transporter A6E01_16575 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase A6E01_16575 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain A6E01_16580 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase A6E01_16585 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain A6E01_16585 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain A6E01_16595 PF02798 Glutathione S-transferase, N-terminal domain A6E01_16600 PF12843 Putative quorum-sensing-regulated virulence factor A6E01_16615 PF13276 HTH-like domain A6E01_16615 PF00665 Integrase core domain A6E01_16615 PF13333 Integrase core domain A6E01_16625 PF06906 Protein of unknown function (DUF1272) A6E01_16635 PF00107 Zinc-binding dehydrogenase A6E01_16635 PF08240 Alcohol dehydrogenase GroES-like domain A6E01_16640 PF00155 Aminotransferase class I and II A6E01_16645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_16645 PF03466 LysR substrate binding domain A6E01_16650 PF00232 Glycosyl hydrolase family 1 A6E01_16670 PF01906 Putative heavy-metal-binding A6E01_16675 PF07885 Ion channel A6E01_16690 PF02566 OsmC-like protein A6E01_16695 PF00313 'Cold-shock' DNA-binding domain A6E01_16700 PF07152 YaeQ protein A6E01_16710 PF01594 AI-2E family transporter A6E01_16745 PF01467 Cytidylyltransferase-like A6E01_16750 PF02540 NAD synthase A6E01_16765 PF02782 FGGY family of carbohydrate kinases, C-terminal domain A6E01_16765 PF00370 FGGY family of carbohydrate kinases, N-terminal domain A6E01_16770 PF00483 Nucleotidyl transferase A6E01_16780 PF12849 PBP superfamily domain A6E01_16795 PF05362 Lon protease (S16) C-terminal proteolytic domain A6E01_16795 PF13654 AAA domain A6E01_16820 PF16355 Domain of unknown function (DUF4982) A6E01_16820 PF02837 Glycosyl hydrolases family 2, sugar binding domain A6E01_16820 PF02836 Glycosyl hydrolases family 2, TIM barrel domain A6E01_16820 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 A6E01_16820 PF00703 Glycosyl hydrolases family 2 A6E01_16830 PF02371 Transposase IS116/IS110/IS902 family A6E01_16830 PF01548 Transposase A6E01_16835 PF08240 Alcohol dehydrogenase GroES-like domain A6E01_16835 PF00107 Zinc-binding dehydrogenase A6E01_16840 PF03466 LysR substrate binding domain A6E01_16840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_16845 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) A6E01_16850 PF03466 LysR substrate binding domain A6E01_16850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_16855 PF00356 Bacterial regulatory proteins, lacI family A6E01_16855 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family A6E01_16860 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A6E01_16860 PF00381 PTS HPr component phosphorylation site A6E01_16865 PF00294 pfkB family carbohydrate kinase A6E01_16870 PF02378 Phosphotransferase system, EIIC A6E01_16870 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A6E01_16885 PF00881 Nitroreductase family A6E01_16900 PF00270 DEAD/DEAH box helicase A6E01_16900 PF03880 DbpA RNA binding domain A6E01_16900 PF00271 Helicase conserved C-terminal domain A6E01_16910 PF12704 MacB-like periplasmic core domain A6E01_16910 PF02687 FtsX-like permease family A6E01_16910 PF00005 ABC transporter A6E01_16915 PF02687 FtsX-like permease family A6E01_16915 PF00005 ABC transporter A6E01_16915 PF12704 MacB-like periplasmic core domain A6E01_16930 PF13609 Gram-negative porin A6E01_16945 PF01551 Peptidase family M23 A6E01_16965 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_16970 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_16970 PF14785 Maltose transport system permease protein MalF P2 domain A6E01_16975 PF01547 Bacterial extracellular solute-binding protein A6E01_16980 PF00005 ABC transporter A6E01_16980 PF08402 TOBE domain A6E01_17005 PF00196 Bacterial regulatory proteins, luxR family A6E01_17015 PF00005 ABC transporter A6E01_17020 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_17025 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_17030 PF12849 PBP superfamily domain A6E01_17035 PF00270 DEAD/DEAH box helicase A6E01_17035 PF00271 Helicase conserved C-terminal domain A6E01_17045 PF17969 L,D-transpeptidase C-terminal domain A6E01_17045 PF01476 LysM domain A6E01_17045 PF03734 L,D-transpeptidase catalytic domain A6E01_17050 PF03441 FAD binding domain of DNA photolyase A6E01_17050 PF00875 DNA photolyase A6E01_17055 PF08349 Protein of unknown function (DUF1722) A6E01_17070 PF11742 Protein of unknown function (DUF3302) A6E01_17075 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A6E01_17075 PF00529 HlyD membrane-fusion protein of T1SS A6E01_17085 PF00999 Sodium/hydrogen exchanger family A6E01_17085 PF02254 TrkA-N domain A6E01_17090 PF02525 Flavodoxin-like fold A6E01_17095 PF03600 Citrate transporter A6E01_17100 PF07687 Peptidase dimerisation domain A6E01_17100 PF01546 Peptidase family M20/M25/M40 A6E01_17115 PF02630 SCO1/SenC A6E01_17125 PF03193 RsgA GTPase A6E01_17130 PF00128 Alpha amylase, catalytic domain A6E01_17145 PF04055 Radical SAM superfamily A6E01_17150 PF01242 6-pyruvoyl tetrahydropterin synthase A6E01_17165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_17165 PF03466 LysR substrate binding domain A6E01_17180 PF00753 Metallo-beta-lactamase superfamily A6E01_17205 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) A6E01_17205 PF00128 Alpha amylase, catalytic domain A6E01_17205 PF02806 Alpha amylase, C-terminal all-beta domain A6E01_17210 PF02446 4-alpha-glucanotransferase A6E01_17215 PF00343 Carbohydrate phosphorylase A6E01_17220 PF00196 Bacterial regulatory proteins, luxR family A6E01_17220 PF17874 MalT-like TPR region A6E01_17225 PF02719 Polysaccharide biosynthesis protein A6E01_17230 PF01370 NAD dependent epimerase/dehydratase family A6E01_17235 PF02397 Bacterial sugar transferase A6E01_17240 PF00535 Glycosyl transferase family 2 A6E01_17245 PF00958 GMP synthase C terminal domain A6E01_17245 PF02540 NAD synthase A6E01_17245 PF00117 Glutamine amidotransferase class-I A6E01_17250 PF00535 Glycosyl transferase family 2 A6E01_17270 PF13737 Transposase DDE domain A6E01_17275 PF01527 Transposase A6E01_17280 PF13683 Integrase core domain A6E01_17280 PF13276 HTH-like domain A6E01_17285 PF07804 HipA-like C-terminal domain A6E01_17285 PF13657 HipA N-terminal domain A6E01_17290 PF01797 Transposase IS200 like A6E01_17305 PF01381 Helix-turn-helix A6E01_17325 PF11855 Protein of unknown function (DUF3375) A6E01_17345 PF13358 DDE superfamily endonuclease A6E01_17390 PF00589 Phage integrase family A6E01_17390 PF02899 Phage integrase, N-terminal SAM-like domain A6E01_17435 PF01979 Amidohydrolase family A6E01_17440 PF02492 CobW/HypB/UreG, nucleotide-binding domain A6E01_17440 PF07683 Cobalamin synthesis protein cobW C-terminal domain A6E01_17445 PF01979 Amidohydrolase family A6E01_17455 PF01103 Surface antigen A6E01_17455 PF17243 POTRA domain TamA domain 1 A6E01_17455 PF07244 Surface antigen variable number repeat A6E01_17465 PF00144 Beta-lactamase A6E01_17470 PF00990 Diguanylate cyclase, GGDEF domain A6E01_17470 PF00563 EAL domain A6E01_17470 PF01590 GAF domain A6E01_17470 PF00360 Phytochrome region A6E01_17480 PF00953 Glycosyl transferase family 4 A6E01_17485 PF00483 Nucleotidyl transferase A6E01_17490 PF00009 Elongation factor Tu GTP binding domain A6E01_17510 PF01507 Phosphoadenosine phosphosulfate reductase family A6E01_17515 PF02080 TrkA-C domain A6E01_17515 PF03600 Citrate transporter A6E01_17530 PF01757 Acyltransferase family A6E01_17535 PF13477 Glycosyl transferase 4-like A6E01_17535 PF00534 Glycosyl transferases group 1 A6E01_17560 PF00535 Glycosyl transferase family 2 A6E01_17570 PF02706 Chain length determinant protein A6E01_17570 PF13614 AAA domain A6E01_17570 PF13807 G-rich domain on putative tyrosine kinase A6E01_17580 PF01451 Low molecular weight phosphotyrosine protein phosphatase A6E01_17585 PF10531 SLBB domain A6E01_17585 PF02563 Polysaccharide biosynthesis/export protein A6E01_17585 PF18412 Outer-membrane lipoprotein Wza C-terminal domain A6E01_17590 PF01507 Phosphoadenosine phosphosulfate reductase family A6E01_17600 PF00009 Elongation factor Tu GTP binding domain A6E01_17605 PF02080 TrkA-C domain A6E01_17605 PF03600 Citrate transporter A6E01_17680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A6E01_17680 PF00529 HlyD membrane-fusion protein of T1SS A6E01_17685 PF00664 ABC transporter transmembrane region A6E01_17685 PF00005 ABC transporter A6E01_17690 PF00005 ABC transporter A6E01_17690 PF00664 ABC transporter transmembrane region A6E01_17690 PF03412 Peptidase C39 family A6E01_17700 PF01266 FAD dependent oxidoreductase A6E01_17705 PF00392 Bacterial regulatory proteins, gntR family A6E01_17705 PF07702 UTRA domain A6E01_17710 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_17715 PF08402 TOBE domain A6E01_17715 PF00005 ABC transporter A6E01_17730 PF07690 Major Facilitator Superfamily A6E01_17735 PF02371 Transposase IS116/IS110/IS902 family A6E01_17735 PF01548 Transposase A6E01_17745 PF00266 Aminotransferase class-V A6E01_17750 PF00202 Aminotransferase class-III A6E01_17755 PF13419 Haloacid dehalogenase-like hydrolase A6E01_17785 PF01546 Peptidase family M20/M25/M40 A6E01_17785 PF07687 Peptidase dimerisation domain A6E01_17790 PF00266 Aminotransferase class-V A6E01_17800 PF01425 Amidase A6E01_17805 PF13593 SBF-like CPA transporter family (DUF4137) A6E01_17810 PF01418 Helix-turn-helix domain, rpiR family A6E01_17810 PF01380 SIS domain A6E01_17815 PF00005 ABC transporter A6E01_17820 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_17825 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_17830 PF00497 Bacterial extracellular solute-binding proteins, family 3 A6E01_17835 PF02371 Transposase IS116/IS110/IS902 family A6E01_17835 PF01548 Transposase A6E01_17840 PF09297 NADH pyrophosphatase zinc ribbon domain A6E01_17840 PF00293 NUDIX domain A6E01_17840 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain A6E01_17845 PF03315 Serine dehydratase beta chain A6E01_17845 PF03313 Serine dehydratase alpha chain A6E01_17850 PF00491 Arginase family A6E01_17855 PF17944 Arginine decarboxylase C-terminal helical extension A6E01_17855 PF17810 Arginine decarboxylase helical bundle domain A6E01_17855 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain A6E01_17860 PF01268 Formate--tetrahydrofolate ligase A6E01_17895 PF14863 Alkyl sulfatase dimerisation A6E01_17895 PF14864 Alkyl sulfatase C-terminal A6E01_17895 PF00753 Metallo-beta-lactamase superfamily A6E01_17900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_17900 PF03466 LysR substrate binding domain A6E01_17905 PF00958 GMP synthase C terminal domain A6E01_17905 PF00117 Glutamine amidotransferase class-I A6E01_17905 PF02540 NAD synthase A6E01_17910 PF00171 Aldehyde dehydrogenase family A6E01_17915 PF00202 Aminotransferase class-III A6E01_17925 PF00171 Aldehyde dehydrogenase family A6E01_17930 PF00011 Hsp20/alpha crystallin family A6E01_17940 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_17945 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_17950 PF00005 ABC transporter A6E01_17950 PF08402 TOBE domain A6E01_17955 PF13416 Bacterial extracellular solute-binding protein A6E01_17960 PF00202 Aminotransferase class-III A6E01_17965 PF00120 Glutamine synthetase, catalytic domain A6E01_17970 PF00120 Glutamine synthetase, catalytic domain A6E01_17975 PF01266 FAD dependent oxidoreductase A6E01_17985 PF13419 Haloacid dehalogenase-like hydrolase A6E01_17990 PF13407 Periplasmic binding protein domain A6E01_17995 PF00005 ABC transporter A6E01_18000 PF02653 Branched-chain amino acid transport system / permease component A6E01_18005 PF00486 Transcriptional regulatory protein, C terminal A6E01_18005 PF18500 CadC C-terminal domain 1 A6E01_18020 PF02355 Protein export membrane protein A6E01_18020 PF07549 SecD/SecF GG Motif A6E01_18025 PF13721 SecD export protein N-terminal TM region A6E01_18025 PF02355 Protein export membrane protein A6E01_18025 PF07549 SecD/SecF GG Motif A6E01_18045 PF01554 MatE A6E01_18075 PF03466 LysR substrate binding domain A6E01_18075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_18080 PF06165 Glycosyltransferase family 36 A6E01_18080 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain A6E01_18090 PF12833 Helix-turn-helix domain A6E01_18090 PF02311 AraC-like ligand binding domain A6E01_18110 PF13808 DDE_Tnp_1-associated A6E01_18110 PF01609 Transposase DDE domain A6E01_18115 PF02678 Pirin A6E01_18115 PF17954 Quercetinase C-terminal cupin domain A6E01_18120 PF07681 DoxX A6E01_18125 PF03466 LysR substrate binding domain A6E01_18125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_18130 PF06772 Bacterial low temperature requirement A protein (LtrA) A6E01_18135 PF13409 Glutathione S-transferase, N-terminal domain A6E01_18150 PF00106 short chain dehydrogenase A6E01_18155 PF13808 DDE_Tnp_1-associated A6E01_18155 PF01609 Transposase DDE domain A6E01_18160 PF01037 Lrp/AsnC ligand binding domain A6E01_18165 PF01810 LysE type translocator A6E01_18170 PF00356 Bacterial regulatory proteins, lacI family A6E01_18190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_18190 PF03466 LysR substrate binding domain A6E01_18220 PF13737 Transposase DDE domain A6E01_18225 PF04298 Putative neutral zinc metallopeptidase A6E01_18235 PF05016 ParE toxin of type II toxin-antitoxin system, parDE A6E01_18245 PF00271 Helicase conserved C-terminal domain A6E01_18245 PF00270 DEAD/DEAH box helicase A6E01_18250 PF01047 MarR family A6E01_18255 PF02566 OsmC-like protein A6E01_18260 PF08240 Alcohol dehydrogenase GroES-like domain A6E01_18260 PF00698 Acyl transferase domain A6E01_18260 PF00550 Phosphopantetheine attachment site A6E01_18260 PF16197 Ketoacyl-synthetase C-terminal extension A6E01_18260 PF00109 Beta-ketoacyl synthase, N-terminal domain A6E01_18260 PF14765 Polyketide synthase dehydratase A6E01_18260 PF02801 Beta-ketoacyl synthase, C-terminal domain A6E01_18260 PF08659 KR domain A6E01_18260 PF00107 Zinc-binding dehydrogenase A6E01_18265 PF00367 phosphotransferase system, EIIB A6E01_18265 PF02378 Phosphotransferase system, EIIC A6E01_18265 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 A6E01_18270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_18270 PF03466 LysR substrate binding domain A6E01_18275 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system A6E01_18280 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA A6E01_18290 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6E01_18290 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A6E01_18305 PF00849 RNA pseudouridylate synthase A6E01_18315 PF13276 HTH-like domain A6E01_18315 PF13333 Integrase core domain A6E01_18315 PF00665 Integrase core domain A6E01_18345 PF08787 Alginate lyase A6E01_18355 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain A6E01_18355 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain A6E01_18360 PF02874 ATP synthase alpha/beta family, beta-barrel domain A6E01_18360 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A6E01_18365 PF00231 ATP synthase A6E01_18370 PF00306 ATP synthase alpha/beta chain, C terminal domain A6E01_18370 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A6E01_18370 PF02874 ATP synthase alpha/beta family, beta-barrel domain A6E01_18380 PF00430 ATP synthase B/B' CF(0) A6E01_18385 PF00137 ATP synthase subunit C A6E01_18390 PF00119 ATP synthase A chain A6E01_18400 PF01316 Arginine repressor, DNA binding domain A6E01_18400 PF02863 Arginine repressor, C-terminal domain A6E01_18405 PF07992 Pyridine nucleotide-disulphide oxidoreductase A6E01_18405 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A6E01_18410 PF00375 Sodium:dicarboxylate symporter family A6E01_18415 PF01042 Endoribonuclease L-PSP A6E01_18420 PF13309 HTH domain A6E01_18420 PF08348 YheO-like PAS domain A6E01_18435 PF01557 Fumarylacetoacetate (FAA) hydrolase family A6E01_18445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_18445 PF03466 LysR substrate binding domain A6E01_18450 PF18030 RimK PreATP-grasp domain A6E01_18450 PF08443 RimK-like ATP-grasp domain A6E01_18460 PF08443 RimK-like ATP-grasp domain A6E01_18460 PF18030 RimK PreATP-grasp domain A6E01_18465 PF00873 AcrB/AcrD/AcrF family A6E01_18475 PF00857 Isochorismatase family A6E01_18480 PF00710 Asparaginase, N-terminal A6E01_18480 PF17763 Glutaminase/Asparaginase C-terminal domain A6E01_18520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_18520 PF03466 LysR substrate binding domain A6E01_18525 PF00582 Universal stress protein family A6E01_18530 PF00884 Sulfatase A6E01_18530 PF08019 Phosphoethanolamine transferase EptA/EptB A6E01_18535 PF06826 Predicted Permease Membrane Region A6E01_18535 PF02080 TrkA-C domain A6E01_18540 PF00155 Aminotransferase class I and II A6E01_18545 PF03616 Sodium/glutamate symporter A6E01_18560 PF00797 N-acetyltransferase A6E01_18565 PF03831 PhnA domain A6E01_18565 PF08274 PhnA Zinc-Ribbon A6E01_18575 PF00892 EamA-like transporter family A6E01_18585 PF13533 Biotin-lipoyl like A6E01_18595 PF03466 LysR substrate binding domain A6E01_18595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A6E01_18600 PF05025 RbsD / FucU transport protein family A6E01_18605 PF00005 ABC transporter A6E01_18610 PF02653 Branched-chain amino acid transport system / permease component A6E01_18615 PF13407 Periplasmic binding protein domain A6E01_18620 PF00294 pfkB family carbohydrate kinase A6E01_18625 PF00356 Bacterial regulatory proteins, lacI family A6E01_18630 PF02386 Cation transport protein A6E01_18635 PF02254 TrkA-N domain A6E01_18635 PF02080 TrkA-C domain A6E01_18640 PF00929 Exonuclease A6E01_18640 PF11490 DNA polymerase III polC-type N-terminus II A6E01_18640 PF07733 Bacterial DNA polymerase III alpha NTPase domain A6E01_18640 PF17657 Bacterial DNA polymerase III alpha subunit finger domain A6E01_18640 PF14579 Helix-hairpin-helix motif A6E01_18640 PF02811 PHP domain A6E01_18645 PF00561 alpha/beta hydrolase fold A6E01_18650 PF13333 Integrase core domain A6E01_18650 PF13276 HTH-like domain A6E01_18650 PF00665 Integrase core domain A6E01_18655 PF01527 Transposase A6E01_18675 PF07148 Maltose operon periplasmic protein precursor (MalM) A6E01_18680 PF02264 LamB porin A6E01_18690 PF00005 ABC transporter A6E01_18690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A6E01_18695 PF00005 ABC transporter A6E01_18695 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A6E01_18700 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_18700 PF12911 N-terminal TM domain of oligopeptide transport permease C A6E01_18705 PF00528 Binding-protein-dependent transport system inner membrane component A6E01_18710 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A6E01_18720 PF07470 Glycosyl Hydrolase Family 88 A6E01_18725 PF00356 Bacterial regulatory proteins, lacI family A6E01_18730 PF12838 4Fe-4S dicluster domain A6E01_18730 PF12800 4Fe-4S binding domain A6E01_18735 PF12837 4Fe-4S binding domain A6E01_18735 PF12801 4Fe-4S binding domain A6E01_18745 PF00005 ABC transporter A6E01_18775 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A6E01_18795 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A6E01_18800 PF00563 EAL domain A6E01_18800 PF03707 Bacterial signalling protein N terminal repeat A6E01_18800 PF00990 Diguanylate cyclase, GGDEF domain A6E01_18815 PF04225 Opacity-associated protein A LysM-like domain A6E01_18815 PF01551 Peptidase family M23 A6E01_18820 PF10928 Protein of unknown function (DUF2810) A6E01_18825 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase A6E01_18825 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase A6E01_18835 PF01709 Transcriptional regulator A6E01_18845 PF13194 Domain of unknown function (DUF4010) A6E01_18865 PF18607 ParA helix turn helix domain A6E01_18865 PF13614 AAA domain A6E01_18885 PF01312 FlhB HrpN YscU SpaS Family A6E01_18890 PF01311 Bacterial export proteins, family 1 A6E01_18895 PF01313 Bacterial export proteins, family 3 A6E01_18900 PF04347 Flagellar biosynthesis protein, FliO A6E01_18900 PF00813 FliP family A6E01_18905 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term A6E01_18915 PF00460 Flagella basal body rod protein A6E01_18920 PF00460 Flagella basal body rod protein A6E01_18920 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A6E01_18930 PF00460 Flagella basal body rod protein A6E01_18930 PF07559 Flagellar basal body protein FlaE A6E01_18930 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A6E01_18935 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A6E01_18935 PF00460 Flagella basal body rod protein A6E01_18940 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A6E01_18940 PF00460 Flagella basal body rod protein A6E01_18945 PF02107 Flagellar L-ring protein A6E01_18950 PF02119 Flagellar P-ring protein A6E01_18965 PF00669 Bacterial flagellin N-terminal helical region A6E01_18965 PF00700 Bacterial flagellin C-terminal helical region A6E01_18970 PF00691 OmpA family A6E01_18975 PF02049 Flagellar hook-basal body complex protein FliE A6E01_18980 PF01514 Secretory protein of YscJ/FliF family A6E01_18980 PF08345 Flagellar M-ring protein C-terminal A6E01_19050 PF00771 FHIPEP family A6E01_19055 PF00669 Bacterial flagellin N-terminal helical region A6E01_19055 PF00700 Bacterial flagellin C-terminal helical region A6E01_19060 PF07195 Flagellar hook-associated protein 2 C-terminus A6E01_19060 PF02465 Flagellar hook-associated protein 2 N-terminus A6E01_19060 PF07196 Flagellin hook IN motif A6E01_19090 PF04545 Sigma-70, region 4 A6E01_19090 PF04542 Sigma-70 region 2 A6E01_19095 PF01618 MotA/TolQ/ExbB proton channel family A6E01_19100 PF00691 OmpA family A6E01_19100 PF13677 Membrane MotB of proton-channel complex MotA/MotB A6E01_19170 PF01131 DNA topoisomerase A6E01_19170 PF01751 Toprim domain A6E01_19200 PF00437 Type II/IV secretion system protein A6E01_19205 PF01594 AI-2E family transporter A6E01_19260 PF00691 OmpA family A6E01_19260 PF05736 OprF membrane domain A6E01_19455 PF00462 Glutaredoxin A6E01_19455 PF08534 Redoxin A6E01_19525 PF07804 HipA-like C-terminal domain A6E01_19525 PF13657 HipA N-terminal domain A6E01_19555 PF00149 Calcineurin-like phosphoesterase A6E01_19570 PF00334 Nucleoside diphosphate kinase A6E01_19580 PF01653 NAD-dependent DNA ligase adenylation domain A6E01_19580 PF03120 NAD-dependent DNA ligase OB-fold domain A6E01_19580 PF00533 BRCA1 C Terminus (BRCT) domain A6E01_19600 PF04002 RadC-like JAB domain A6E01_19640 PF00625 Guanylate kinase A6E01_19725 PF04381 Putative exonuclease, RdgC A6E01_19735 PF01206 Sulfurtransferase TusA A6E01_19825 PF17762 HTH domain found in ParB protein A6E01_19825 PF02195 ParB-like nuclease domain A6E01_19975 PF01116 Fructose-bisphosphate aldolase class-II A6E01_20035 PF13817 IS66 C-terminal element A6E01_20035 PF13005 zinc-finger binding domain of transposase IS66 A6E01_20035 PF13007 Transposase C of IS166 homeodomain A6E01_20035 PF03050 Transposase IS66 family A6E01_20185 PF13520 Amino acid permease A6E01_20190 PF04371 Porphyromonas-type peptidyl-arginine deiminase A6E01_20255 PF02086 D12 class N6 adenine-specific DNA methyltransferase A6E01_20265 PF01145 SPFH domain / Band 7 family A6E01_20265 PF16200 C-terminal region of band_7 A6E01_20380 PF04245 37-kD nucleoid-associated bacterial protein A6E01_20420 PF01476 LysM domain A6E01_20420 PF08525 Opacity-associated protein A N-terminal motif A6E01_20420 PF01551 Peptidase family M23 A6E01_20625 PF08411 Exonuclease C-terminal A6E01_20625 PF00929 Exonuclease A6E01_20630 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain A6E01_20630 PF01464 Transglycosylase SLT domain A6E01_20645 PF00924 Mechanosensitive ion channel A6E01_20695 PF01478 Type IV leader peptidase family A6E01_20695 PF06750 Bacterial Peptidase A24 N-terminal domain A6E01_20705 PF00436 Single-strand binding protein family A6E01_20725 PF03776 Septum formation topological specificity factor MinE A6E01_20770 PF06406 StbA protein A6E01_20795 PF13638 PIN domain A6E01_20795 PF02562 PhoH-like protein A6E01_20835 PF03573 outer membrane porin, OprD family