locus-tag class description D0784_00005 PF08299 Bacterial dnaA protein helix-turn-helix D0784_00005 PF11638 DnaA N-terminal domain D0784_00005 PF00308 Bacterial dnaA protein D0784_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain D0784_00010 PF02767 DNA polymerase III beta subunit, central domain D0784_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain D0784_00015 PF02463 RecF/RecN/SMC N terminal domain D0784_00020 PF01751 Toprim domain D0784_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_00020 PF18053 DNA gyrase B subunit insert domain D0784_00020 PF00986 DNA gyrase B subunit, carboxyl terminus D0784_00020 PF00204 DNA gyrase B D0784_00025 PF00011 Hsp20/alpha crystallin family D0784_00030 PF00155 Aminotransferase class I and II D0784_00035 PF02092 Glycyl-tRNA synthetase beta subunit D0784_00035 PF05746 DALR anticodon binding domain D0784_00040 PF02091 Glycyl-tRNA synthetase alpha subunit D0784_00045 PF01169 Uncharacterized protein family UPF0016 D0784_00055 PF01206 Sulfurtransferase TusA D0784_00065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_00065 PF03466 LysR substrate binding domain D0784_00070 PF08240 Alcohol dehydrogenase GroES-like domain D0784_00070 PF00107 Zinc-binding dehydrogenase D0784_00075 PF02803 Thiolase, C-terminal domain D0784_00075 PF00108 Thiolase, N-terminal domain D0784_00080 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D0784_00080 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D0784_00080 PF00378 Enoyl-CoA hydratase/isomerase D0784_00085 PF09186 Domain of unknown function (DUF1949) D0784_00085 PF01205 Uncharacterized protein family UPF0029 D0784_00090 PF02386 Cation transport protein D0784_00095 PF12724 Flavodoxin domain D0784_00140 PF03466 LysR substrate binding domain D0784_00140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_00145 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain D0784_00145 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain D0784_00150 PF04380 Membrane fusogenic activity D0784_00160 PF00873 AcrB/AcrD/AcrF family D0784_00165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0784_00170 PF08359 YsiA-like protein, C-terminal region D0784_00170 PF00440 Bacterial regulatory proteins, tetR family D0784_00175 PF00580 UvrD/REP helicase N-terminal domain D0784_00175 PF13361 UvrD-like helicase C-terminal domain D0784_00180 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D0784_00210 PF13419 Haloacid dehalogenase-like hydrolase D0784_00220 PF00005 ABC transporter D0784_00220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0784_00225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0784_00235 PF12911 N-terminal TM domain of oligopeptide transport permease C D0784_00235 PF00528 Binding-protein-dependent transport system inner membrane component D0784_00265 PF00069 Protein kinase domain D0784_00270 PF00356 Bacterial regulatory proteins, lacI family D0784_00270 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D0784_00275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_00275 PF03466 LysR substrate binding domain D0784_00280 PF00893 Small Multidrug Resistance protein D0784_00285 PF00893 Small Multidrug Resistance protein D0784_00295 PF00920 Dehydratase family D0784_00300 PF01202 Shikimate kinase D0784_00305 PF02447 GntP family permease D0784_00310 PF01081 KDPG and KHG aldolase D0784_00315 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D0784_00315 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0784_00325 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ D0784_00335 PF01432 Peptidase family M3 D0784_00340 PF01037 Lrp/AsnC ligand binding domain D0784_00345 PF08448 PAS fold D0784_00345 PF00563 EAL domain D0784_00345 PF00990 Diguanylate cyclase, GGDEF domain D0784_00350 PF04445 Putative SAM-dependent methyltransferase D0784_00360 PF02556 Preprotein translocase subunit SecB D0784_00375 PF00892 EamA-like transporter family D0784_00380 PF00582 Universal stress protein family D0784_00385 PF00210 Ferritin-like domain D0784_00390 PF10625 Universal stress protein B (UspB) D0784_00410 PF04545 Sigma-70, region 4 D0784_00410 PF04542 Sigma-70 region 2 D0784_00420 PF12727 PBP superfamily domain D0784_00420 PF12728 Helix-turn-helix domain D0784_00425 PF00563 EAL domain D0784_00425 PF03707 Bacterial signalling protein N terminal repeat D0784_00425 PF00990 Diguanylate cyclase, GGDEF domain D0784_00435 PF02646 RmuC family D0784_00440 PF01209 ubiE/COQ5 methyltransferase family D0784_00445 PF02036 SCP-2 sterol transfer family D0784_00450 PF03109 ABC1 family D0784_00455 PF02416 mttA/Hcf106 family D0784_00460 PF02416 mttA/Hcf106 family D0784_00465 PF00902 Sec-independent protein translocase protein (TatC) D0784_00470 PF01026 TatD related DNase D0784_00475 PF00490 Delta-aminolevulinic acid dehydratase D0784_00490 PF01367 5'-3' exonuclease, C-terminal SAM fold D0784_00490 PF00476 DNA polymerase family A D0784_00490 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D0784_00490 PF01612 3'-5' exonuclease D0784_00500 PF01926 50S ribosome-binding GTPase D0784_00505 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D0784_00530 PF04220 Der GTPase activator (YihI) D0784_00535 PF10675 Protein of unknown function (DUF2489) D0784_00540 PF04055 Radical SAM superfamily D0784_00540 PF06969 HemN C-terminal domain D0784_00545 PF00962 Adenosine/AMP deaminase D0784_00550 PF00990 Diguanylate cyclase, GGDEF domain D0784_00550 PF00563 EAL domain D0784_00550 PF03707 Bacterial signalling protein N terminal repeat D0784_00550 PF13188 PAS domain D0784_00555 PF00072 Response regulator receiver domain D0784_00555 PF00158 Sigma-54 interaction domain D0784_00555 PF02954 Bacterial regulatory protein, Fis family D0784_00560 PF00989 PAS fold D0784_00560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_00560 PF00512 His Kinase A (phospho-acceptor) domain D0784_00570 PF00120 Glutamine synthetase, catalytic domain D0784_00570 PF03951 Glutamine synthetase, beta-Grasp domain D0784_00595 PF03631 Virulence factor BrkB D0784_00600 PF02580 D-Tyr-tRNA(Tyr) deacylase D0784_00605 PF00583 Acetyltransferase (GNAT) family D0784_00605 PF09500 Putative thioesterase (yiiD_Cterm) D0784_00615 PF01293 Phosphoenolpyruvate carboxykinase D0784_00620 PF01430 Hsp33 protein D0784_00625 PF01479 S4 domain D0784_00630 PF11356 Type II secretion system protein C D0784_00635 PF03958 Bacterial type II/III secretion system short domain D0784_00635 PF00263 Bacterial type II and III secretion system protein D0784_00640 PF00437 Type II/IV secretion system protein D0784_00645 PF00482 Type II secretion system (T2SS), protein F D0784_00650 PF07963 Prokaryotic N-terminal methylation motif D0784_00650 PF08334 Type II secretion system (T2SS), protein G D0784_00655 PF12019 Type II transport protein GspH D0784_00660 PF07963 Prokaryotic N-terminal methylation motif D0784_00660 PF02501 Type II secretion system (T2SS), protein I D0784_00665 PF07963 Prokaryotic N-terminal methylation motif D0784_00665 PF11612 Type II secretion system (T2SS), protein J D0784_00670 PF03934 Type II secretion system (T2SS), protein K D0784_00675 PF05134 Type II secretion system (T2SS), protein L D0784_00675 PF12693 GspL periplasmic domain D0784_00680 PF04612 Type II secretion system (T2SS), protein M D0784_00685 PF01203 Type II secretion system (T2SS), protein N D0784_00690 PF00459 Inositol monophosphatase family D0784_00695 PF00293 NUDIX domain D0784_00700 PF01521 Iron-sulphur cluster biosynthesis D0784_00700 PF01106 NifU-like domain D0784_00705 PF00156 Phosphoribosyl transferase domain D0784_00710 PF00561 alpha/beta hydrolase fold D0784_00720 PF16921 Tex protein YqgF-like domain D0784_00720 PF09371 Tex-like protein N-terminal domain D0784_00720 PF17674 HHH domain D0784_00720 PF00575 S1 RNA binding domain D0784_00755 PF03449 Transcription elongation factor, N-terminal D0784_00755 PF01272 Transcription elongation factor, GreA/GreB, C-term D0784_00805 PF00512 His Kinase A (phospho-acceptor) domain D0784_00805 PF00072 Response regulator receiver domain D0784_00805 PF09308 LuxQ, periplasmic D0784_00805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_00815 PF00004 ATPase family associated with various cellular activities (AAA) D0784_00845 PF00486 Transcriptional regulatory protein, C terminal D0784_00845 PF00072 Response regulator receiver domain D0784_00850 PF00512 His Kinase A (phospho-acceptor) domain D0784_00850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_00850 PF00672 HAMP domain D0784_00855 PF00860 Permease family D0784_00860 PF00326 Prolyl oligopeptidase family D0784_00865 PF00271 Helicase conserved C-terminal domain D0784_00865 PF17191 RecG wedge domain D0784_00865 PF00270 DEAD/DEAH box helicase D0784_00870 PF12105 SpoU, rRNA methylase, C-terminal D0784_00870 PF00588 SpoU rRNA Methylase family D0784_00875 PF13291 ACT domain D0784_00875 PF04607 Region found in RelA / SpoT proteins D0784_00875 PF02824 TGS domain D0784_00880 PF01192 RNA polymerase Rpb6 D0784_00885 PF00625 Guanylate kinase D0784_00900 PF02472 Biopolymer transport protein ExbD/TolR D0784_00905 PF01618 MotA/TolQ/ExbB proton channel family D0784_00920 PF00593 TonB dependent receptor D0784_00920 PF07715 TonB-dependent Receptor Plug Domain D0784_00925 PF00528 Binding-protein-dependent transport system inner membrane component D0784_00930 PF12911 N-terminal TM domain of oligopeptide transport permease C D0784_00930 PF00528 Binding-protein-dependent transport system inner membrane component D0784_00935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0784_00940 PF00005 ABC transporter D0784_00940 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0784_00945 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0784_00945 PF00005 ABC transporter D0784_00960 PF00892 EamA-like transporter family D0784_00965 PF03755 YicC-like family, N-terminal region D0784_00965 PF08340 Domain of unknown function (DUF1732) D0784_00970 PF03725 3' exoribonuclease family, domain 2 D0784_00970 PF01138 3' exoribonuclease family, domain 1 D0784_00980 PF03279 Bacterial lipid A biosynthesis acyltransferase D0784_00985 PF00440 Bacterial regulatory proteins, tetR family D0784_00990 PF04127 DNA / pantothenate metabolism flavoprotein D0784_00990 PF02441 Flavoprotein D0784_01000 PF00672 HAMP domain D0784_01000 PF17200 Single Cache domain 2 D0784_01000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0784_01005 PF04002 RadC-like JAB domain D0784_01010 PF00830 Ribosomal L28 family D0784_01015 PF00471 Ribosomal protein L33 D0784_01025 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain D0784_01025 PF06827 Zinc finger found in FPG and IleRS D0784_01025 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain D0784_01040 PF01467 Cytidylyltransferase-like D0784_01045 PF05686 Glycosyl transferase family 90 D0784_01050 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D0784_01055 PF02348 Cytidylyltransferase D0784_01060 PF08666 SAF domain D0784_01060 PF03102 NeuB family D0784_01065 PF02350 UDP-N-acetylglucosamine 2-epimerase D0784_01070 PF00534 Glycosyl transferases group 1 D0784_01070 PF13439 Glycosyltransferase Family 4 D0784_01075 PF01219 Prokaryotic diacylglycerol kinase D0784_01085 PF12464 Maltose acetyltransferase D0784_01085 PF00132 Bacterial transferase hexapeptide (six repeats) D0784_01085 PF14602 Hexapeptide repeat of succinyl-transferase D0784_01095 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) D0784_01100 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D0784_01105 PF03279 Bacterial lipid A biosynthesis acyltransferase D0784_01110 PF01370 NAD dependent epimerase/dehydratase family D0784_01115 PF06082 Exopolysaccharide biosynthesis protein YbjH D0784_01140 PF02563 Polysaccharide biosynthesis/export protein D0784_01140 PF10531 SLBB domain D0784_01140 PF18412 Outer-membrane lipoprotein Wza C-terminal domain D0784_01155 PF08666 SAF domain D0784_01155 PF03102 NeuB family D0784_01160 PF02350 UDP-N-acetylglucosamine 2-epimerase D0784_01185 PF03808 Glycosyl transferase WecB/TagA/CpsF family D0784_01190 PF01370 NAD dependent epimerase/dehydratase family D0784_01195 PF02397 Bacterial sugar transferase D0784_01200 PF02719 Polysaccharide biosynthesis protein D0784_01205 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D0784_01205 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D0784_01205 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D0784_01215 PF00121 Triosephosphate isomerase D0784_01240 PF08220 DeoR-like helix-turn-helix domain D0784_01240 PF00455 DeoR C terminal sensor domain D0784_01245 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded D0784_01255 PF06005 Cell division protein ZapB D0784_01260 PF03737 Aldolase/RraA D0784_01265 PF01040 UbiA prenyltransferase family D0784_01270 PF00004 ATPase family associated with various cellular activities (AAA) D0784_01270 PF07724 AAA domain (Cdc48 subfamily) D0784_01275 PF00227 Proteasome subunit D0784_01285 PF00356 Bacterial regulatory proteins, lacI family D0784_01290 PF00270 DEAD/DEAH box helicase D0784_01290 PF18074 Primosomal protein N C-terminal domain D0784_01290 PF17764 3′ DNA-binding domain (3′BD) D0784_01290 PF00271 Helicase conserved C-terminal domain D0784_01290 PF18319 PriA DNA helicase Cys-rich region (CRR) domain D0784_01295 PF01197 Ribosomal protein L31 D0784_01300 PF00338 Ribosomal protein S10p/S20e D0784_01305 PF00297 Ribosomal protein L3 D0784_01310 PF00573 Ribosomal protein L4/L1 family D0784_01315 PF00276 Ribosomal protein L23 D0784_01320 PF00181 Ribosomal Proteins L2, RNA binding domain D0784_01320 PF03947 Ribosomal Proteins L2, C-terminal domain D0784_01325 PF00203 Ribosomal protein S19 D0784_01330 PF00237 Ribosomal protein L22p/L17e D0784_01335 PF07650 KH domain D0784_01335 PF00189 Ribosomal protein S3, C-terminal domain D0784_01340 PF00252 Ribosomal protein L16p/L10e D0784_01345 PF00831 Ribosomal L29 protein D0784_01350 PF00366 Ribosomal protein S17 D0784_01355 PF00238 Ribosomal protein L14p/L23e D0784_01360 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 D0784_01360 PF00467 KOW motif D0784_01365 PF00281 Ribosomal protein L5 D0784_01365 PF00673 ribosomal L5P family C-terminus D0784_01370 PF00253 Ribosomal protein S14p/S29e D0784_01375 PF00410 Ribosomal protein S8 D0784_01380 PF00347 Ribosomal protein L6 D0784_01385 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast D0784_01390 PF03719 Ribosomal protein S5, C-terminal domain D0784_01390 PF00333 Ribosomal protein S5, N-terminal domain D0784_01395 PF00327 Ribosomal protein L30p/L7e D0784_01400 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A D0784_01405 PF00344 SecY translocase D0784_01410 PF00444 Ribosomal protein L36 D0784_01415 PF00416 Ribosomal protein S13/S18 D0784_01420 PF00411 Ribosomal protein S11 D0784_01425 PF00163 Ribosomal protein S4/S9 N-terminal domain D0784_01425 PF01479 S4 domain D0784_01430 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain D0784_01430 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain D0784_01430 PF01000 RNA polymerase Rpb3/RpoA insert domain D0784_01435 PF01196 Ribosomal protein L17 D0784_01445 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D0784_01445 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D0784_01460 PF13673 Acetyltransferase (GNAT) domain D0784_01465 PF03880 DbpA RNA binding domain D0784_01465 PF00270 DEAD/DEAH box helicase D0784_01465 PF00271 Helicase conserved C-terminal domain D0784_01475 PF02872 5'-nucleotidase, C-terminal domain D0784_01475 PF00149 Calcineurin-like phosphoesterase D0784_01480 PF14824 Sirohaem biosynthesis protein central D0784_01480 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D0784_01480 PF10414 Sirohaem synthase dimerisation region D0784_01485 PF01507 Phosphoadenosine phosphosulfate reductase family D0784_01490 PF00009 Elongation factor Tu GTP binding domain D0784_01495 PF03600 Citrate transporter D0784_01495 PF02080 TrkA-C domain D0784_01520 PF00005 ABC transporter D0784_01530 PF10795 Protein of unknown function (DUF2607) D0784_01535 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) D0784_01545 PF01625 Peptide methionine sulfoxide reductase D0784_01550 PF17243 POTRA domain TamA domain 1 D0784_01550 PF07244 Surface antigen variable number repeat D0784_01550 PF01103 Surface antigen D0784_01555 PF04357 TamB, inner membrane protein subunit of TAM complex D0784_01560 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like D0784_01575 PF00719 Inorganic pyrophosphatase D0784_01580 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain D0784_01585 PF01225 Mur ligase family, catalytic domain D0784_01585 PF02875 Mur ligase family, glutamate ligase domain D0784_01585 PF08245 Mur ligase middle domain D0784_01590 PF02441 Flavoprotein D0784_01600 PF00528 Binding-protein-dependent transport system inner membrane component D0784_01605 PF00005 ABC transporter D0784_01620 PF16868 NMT1-like family D0784_01625 PF01316 Arginine repressor, DNA binding domain D0784_01625 PF02863 Arginine repressor, C-terminal domain D0784_01630 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain D0784_01630 PF00056 lactate/malate dehydrogenase, NAD binding domain D0784_01640 PF00348 Polyprenyl synthetase D0784_01645 PF00829 Ribosomal prokaryotic L21 protein D0784_01650 PF01016 Ribosomal L27 protein D0784_01655 PF01926 50S ribosome-binding GTPase D0784_01655 PF01018 GTP1/OBG D0784_01660 PF06738 Putative threonine/serine exporter D0784_01665 PF12821 Threonine/Serine exporter, ThrE D0784_01670 PF00186 Dihydrofolate reductase D0784_01675 PF00149 Calcineurin-like phosphoesterase D0784_01680 PF04379 ApaG domain D0784_01685 PF00398 Ribosomal RNA adenine dimethylase D0784_01690 PF04166 Pyridoxal phosphate biosynthetic protein PdxA D0784_01695 PF09312 SurA N-terminal domain D0784_01700 PF03968 OstA-like protein D0784_01700 PF04453 LPS transport system D D0784_01705 PF00226 DnaJ domain D0784_01705 PF05099 Tellurite resistance protein TerB D0784_01715 PF00694 Aconitase C-terminal domain D0784_01720 PF00330 Aconitase family (aconitate hydratase) D0784_01725 PF00180 Isocitrate/isopropylmalate dehydrogenase D0784_01730 PF08502 LeuA allosteric (dimerisation) domain D0784_01730 PF00682 HMGL-like D0784_01750 PF01569 PAP2 superfamily D0784_01760 PF03466 LysR substrate binding domain D0784_01760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_01765 PF00501 AMP-binding enzyme D0784_01770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D0784_01770 PF00205 Thiamine pyrophosphate enzyme, central domain D0784_01770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D0784_01775 PF10369 Small subunit of acetolactate synthase D0784_01780 PF17158 Membrane-associated sensor, integral membrane domain D0784_01780 PF00990 Diguanylate cyclase, GGDEF domain D0784_01790 PF02887 Pyruvate kinase, alpha/beta domain D0784_01790 PF00224 Pyruvate kinase, barrel domain D0784_01795 PF00455 DeoR C terminal sensor domain D0784_01795 PF08220 DeoR-like helix-turn-helix domain D0784_01800 PF01380 SIS domain D0784_01815 PF00486 Transcriptional regulatory protein, C terminal D0784_01815 PF00072 Response regulator receiver domain D0784_01820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_01820 PF00512 His Kinase A (phospho-acceptor) domain D0784_01820 PF00672 HAMP domain D0784_01825 PF13419 Haloacid dehalogenase-like hydrolase D0784_01830 PF05068 Mannitol repressor D0784_01835 PF01232 Mannitol dehydrogenase Rossmann domain D0784_01835 PF08125 Mannitol dehydrogenase C-terminal domain D0784_01840 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0784_01840 PF02378 Phosphotransferase system, EIIC D0784_01840 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0784_01875 PF04542 Sigma-70 region 2 D0784_01875 PF04539 Sigma-70 region 3 D0784_01875 PF04545 Sigma-70, region 4 D0784_01875 PF03979 Sigma-70 factor, region 1.1 D0784_01875 PF04546 Sigma-70, non-essential region D0784_01875 PF00140 Sigma-70 factor, region 1.2 D0784_01880 PF01807 CHC2 zinc finger D0784_01880 PF08275 DNA primase catalytic core, N-terminal domain D0784_01880 PF08278 DNA primase DnaG DnaB-binding D0784_01880 PF10410 DnaB-helicase binding domain of primase D0784_01885 PF09424 Yqey-like protein D0784_01890 PF01165 Ribosomal protein S21 D0784_01895 PF00814 Glycoprotease family D0784_01900 PF12697 Alpha/beta hydrolase family D0784_01905 PF02660 Glycerol-3-phosphate acyltransferase D0784_01910 PF02152 Dihydroneopterin aldolase D0784_01915 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) D0784_01920 PF02673 Bacitracin resistance protein BacA D0784_01925 PF12627 Probable RNA and SrmB- binding site of polymerase A D0784_01925 PF01743 Poly A polymerase head domain D0784_01925 PF01966 HD domain D0784_01930 PF13401 AAA domain D0784_01930 PF01471 Putative peptidoglycan binding domain D0784_01945 PF08239 Bacterial SH3 domain D0784_01950 PF01384 Phosphate transporter family D0784_01955 PF01865 Protein of unknown function DUF47 D0784_01960 PF01928 CYTH domain D0784_01965 PF07885 Ion channel D0784_01970 PF00672 HAMP domain D0784_01970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0784_01970 PF02743 Cache domain D0784_01975 PF03710 Glutamate-ammonia ligase adenylyltransferase D0784_01975 PF08335 GlnD PII-uridylyltransferase D0784_01980 PF01467 Cytidylyltransferase-like D0784_01980 PF00294 pfkB family carbohydrate kinase D0784_01985 PF02321 Outer membrane efflux protein D0784_01990 PF00293 NUDIX domain D0784_01995 PF06853 Protein of unknown function (DUF1249) D0784_02000 PF00149 Calcineurin-like phosphoesterase D0784_02005 PF05728 Uncharacterised protein family (UPF0227) D0784_02010 PF00204 DNA gyrase B D0784_02010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_02010 PF00986 DNA gyrase B subunit, carboxyl terminus D0784_02010 PF01751 Toprim domain D0784_02015 PF03989 DNA gyrase C-terminal domain, beta-propeller D0784_02015 PF00521 DNA gyrase/topoisomerase IV, subunit A D0784_02020 PF13180 PDZ domain D0784_02025 PF00595 PDZ domain D0784_02030 PF06295 Protein of unknown function (DUF1043) D0784_02040 PF03969 AFG1-like ATPase D0784_02050 PF00572 Ribosomal protein L13 D0784_02055 PF00380 Ribosomal protein S9/S16 D0784_02060 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal D0784_02060 PF00355 Rieske [2Fe-2S] domain D0784_02065 PF00033 Cytochrome b/b6/petB D0784_02065 PF00032 Cytochrome b(C-terminal)/b6/petD D0784_02070 PF02167 Cytochrome C1 family D0784_02075 PF02798 Glutathione S-transferase, N-terminal domain D0784_02075 PF00043 Glutathione S-transferase, C-terminal domain D0784_02080 PF04386 Stringent starvation protein B D0784_02085 PF04972 BON domain D0784_02090 PF13580 SIS domain D0784_02095 PF02021 Uncharacterised protein family UPF0102 D0784_02100 PF04348 LppC putative lipoprotein D0784_02105 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D0784_02120 PF01795 MraW methylase family D0784_02125 PF04999 Cell division protein FtsL D0784_02130 PF00905 Penicillin binding protein transpeptidase domain D0784_02130 PF03717 Penicillin-binding Protein dimerisation domain D0784_02135 PF01225 Mur ligase family, catalytic domain D0784_02135 PF02875 Mur ligase family, glutamate ligase domain D0784_02135 PF08245 Mur ligase middle domain D0784_02140 PF02875 Mur ligase family, glutamate ligase domain D0784_02140 PF01225 Mur ligase family, catalytic domain D0784_02140 PF08245 Mur ligase middle domain D0784_02145 PF00953 Glycosyl transferase family 4 D0784_02145 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 D0784_02150 PF08245 Mur ligase middle domain D0784_02150 PF02875 Mur ligase family, glutamate ligase domain D0784_02155 PF01098 Cell cycle protein D0784_02160 PF04101 Glycosyltransferase family 28 C-terminal domain D0784_02160 PF03033 Glycosyltransferase family 28 N-terminal domain D0784_02165 PF02875 Mur ligase family, glutamate ligase domain D0784_02165 PF01225 Mur ligase family, catalytic domain D0784_02165 PF08245 Mur ligase middle domain D0784_02170 PF03799 Cell division protein FtsQ D0784_02170 PF08478 POTRA domain, FtsQ-type D0784_02175 PF02491 SHS2 domain inserted in FTSA D0784_02180 PF12327 FtsZ family, C-terminal domain D0784_02180 PF00091 Tubulin/FtsZ family, GTPase domain D0784_02185 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase D0784_02195 PF02810 SEC-C motif D0784_02195 PF01043 SecA preprotein cross-linking domain D0784_02195 PF07516 SecA Wing and Scaffold domain D0784_02195 PF07517 SecA DEAD-like domain D0784_02200 PF00293 NUDIX domain D0784_02205 PF05173 Dihydrodipicolinate reductase, C-terminus D0784_02205 PF01113 Dihydrodipicolinate reductase, N-terminus D0784_02210 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain D0784_02210 PF00117 Glutamine amidotransferase class-I D0784_02215 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D0784_02215 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain D0784_02215 PF02142 MGS-like domain D0784_02240 PF01925 Sulfite exporter TauE/SafE D0784_02245 PF03466 LysR substrate binding domain D0784_02245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_02250 PF03458 UPF0126 domain D0784_02255 PF01497 Periplasmic binding protein D0784_02265 PF01048 Phosphorylase superfamily D0784_02275 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0784_02275 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D0784_02280 PF01493 GXGXG motif D0784_02280 PF01645 Conserved region in glutamate synthase D0784_02280 PF00310 Glutamine amidotransferases class-II D0784_02280 PF04898 Glutamate synthase central domain D0784_02285 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0784_02285 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D0784_02290 PF01493 GXGXG motif D0784_02290 PF01645 Conserved region in glutamate synthase D0784_02290 PF04898 Glutamate synthase central domain D0784_02290 PF00310 Glutamine amidotransferases class-II D0784_02295 PF16199 Radical_SAM C-terminal domain D0784_02295 PF04055 Radical SAM superfamily D0784_02300 PF00360 Phytochrome region D0784_02300 PF00990 Diguanylate cyclase, GGDEF domain D0784_02300 PF01590 GAF domain D0784_02300 PF00563 EAL domain D0784_02310 PF00072 Response regulator receiver domain D0784_02310 PF00989 PAS fold D0784_02310 PF01627 Hpt domain D0784_02310 PF18415 Histidine kinase receptor ArcB trans-membrane domain D0784_02310 PF00512 His Kinase A (phospho-acceptor) domain D0784_02310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_02320 PF00072 Response regulator receiver domain D0784_02320 PF00486 Transcriptional regulatory protein, C terminal D0784_02335 PF03737 Aldolase/RraA D0784_02345 PF00742 Homoserine dehydrogenase D0784_02345 PF13840 ACT domain D0784_02345 PF01842 ACT domain D0784_02345 PF00696 Amino acid kinase family D0784_02345 PF03447 Homoserine dehydrogenase, NAD binding domain D0784_02350 PF08544 GHMP kinases C terminal D0784_02350 PF00288 GHMP kinases N terminal domain D0784_02355 PF14821 Threonine synthase N terminus D0784_02355 PF00291 Pyridoxal-phosphate dependent enzyme D0784_02365 PF01228 Glycine radical D0784_02370 PF01261 Xylose isomerase-like TIM barrel D0784_02375 PF03167 Uracil DNA glycosylase superfamily D0784_02390 PF01235 Sodium:alanine symporter family D0784_02395 PF03883 Peroxide stress protein YaaA D0784_02405 PF00270 DEAD/DEAH box helicase D0784_02405 PF00271 Helicase conserved C-terminal domain D0784_02410 PF05175 Methyltransferase small domain D0784_02415 PF05525 Branched-chain amino acid transport protein D0784_02420 PF00258 Flavodoxin D0784_02425 PF02899 Phage integrase, N-terminal SAM-like domain D0784_02425 PF00589 Phage integrase family D0784_02430 PF10411 Disulfide bond isomerase protein N-terminus D0784_02430 PF13098 Thioredoxin-like domain D0784_02435 PF02272 DHHA1 domain D0784_02435 PF01368 DHH family D0784_02435 PF17768 RecJ OB domain D0784_02445 PF00152 tRNA synthetases class II (D, K and N) D0784_02445 PF01336 OB-fold nucleic acid binding domain D0784_02450 PF00158 Sigma-54 interaction domain D0784_02450 PF00072 Response regulator receiver domain D0784_02450 PF02954 Bacterial regulatory protein, Fis family D0784_02460 PF00248 Aldo/keto reductase family D0784_02470 PF02976 DNA mismatch repair enzyme MutH D0784_02475 PF00293 NUDIX domain D0784_02480 PF02896 PEP-utilising enzyme, TIM barrel domain D0784_02480 PF05524 PEP-utilising enzyme, N-terminal D0784_02480 PF00391 PEP-utilising enzyme, mobile domain D0784_02480 PF01590 GAF domain D0784_02485 PF01925 Sulfite exporter TauE/SafE D0784_02490 PF01790 Prolipoprotein diacylglyceryl transferase D0784_02495 PF00303 Thymidylate synthase D0784_02500 PF02690 Na+/Pi-cotransporter D0784_02505 PF03466 LysR substrate binding domain D0784_02505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_02510 PF01022 Bacterial regulatory protein, arsR family D0784_02515 PF01649 Ribosomal protein S20 D0784_02520 PF03023 Lipid II flippase MurJ D0784_02525 PF06574 FAD synthetase D0784_02525 PF01687 Riboflavin kinase D0784_02530 PF06827 Zinc finger found in FPG and IleRS D0784_02530 PF00133 tRNA synthetases class I (I, L, M and V) D0784_02530 PF08264 Anticodon-binding domain of tRNA D0784_02535 PF01252 Signal peptidase (SPase) II D0784_02540 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D0784_02545 PF02401 LytB protein D0784_02550 PF00072 Response regulator receiver domain D0784_02550 PF04397 LytTr DNA-binding domain D0784_02555 PF07694 5TMR of 5TMR-LYT D0784_02555 PF06580 Histidine kinase D0784_02560 PF02554 Carbon starvation protein CstA D0784_02575 PF01380 SIS domain D0784_02580 PF03702 Anhydro-N-acetylmuramic acid kinase D0784_02585 PF00933 Glycosyl hydrolase family 3 N terminal domain D0784_02590 PF00793 DAHP synthetase I family D0784_02595 PF02153 Prephenate dehydrogenase D0784_02595 PF01817 Chorismate mutase type II D0784_02600 PF01551 Peptidase family M23 D0784_02600 PF04225 Opacity-associated protein A LysM-like domain D0784_02605 PF07238 PilZ domain D0784_02610 PF12848 ABC transporter D0784_02610 PF00005 ABC transporter D0784_02615 PF14718 Soluble lytic murein transglycosylase L domain D0784_02615 PF01464 Transglycosylase SLT domain D0784_02620 PF01371 Trp repressor protein D0784_02625 PF01931 Protein of unknown function DUF84 D0784_02630 PF01817 Chorismate mutase type II D0784_02630 PF00800 Prephenate dehydratase D0784_02635 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein D0784_02640 PF01464 Transglycosylase SLT domain D0784_02645 PF13525 Outer membrane lipoprotein D0784_02650 PF00849 RNA pseudouridylate synthase D0784_02650 PF01479 S4 domain D0784_02660 PF00004 ATPase family associated with various cellular activities (AAA) D0784_02660 PF17871 AAA lid domain D0784_02660 PF10431 C-terminal, D2-small domain, of ClpB protein D0784_02660 PF02861 Clp amino terminal domain, pathogenicity island component D0784_02660 PF07724 AAA domain (Cdc48 subfamily) D0784_02710 PF03411 Penicillin-insensitive murein endopeptidase D0784_02720 PF00037 4Fe-4S binding domain D0784_02730 PF04381 Putative exonuclease, RdgC D0784_02735 PF00486 Transcriptional regulatory protein, C terminal D0784_02735 PF00072 Response regulator receiver domain D0784_02740 PF00989 PAS fold D0784_02740 PF11808 Phosphate regulon sensor protein PhoR D0784_02740 PF00512 His Kinase A (phospho-acceptor) domain D0784_02740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_02745 PF12849 PBP superfamily domain D0784_02750 PF02541 Ppx/GppA phosphatase family D0784_02755 PF13089 Polyphosphate kinase N-terminal domain D0784_02755 PF17941 Polyphosphate kinase C-terminal domain 1 D0784_02755 PF02503 Polyphosphate kinase middle domain D0784_02755 PF13090 Polyphosphate kinase C-terminal domain 2 D0784_02760 PF00528 Binding-protein-dependent transport system inner membrane component D0784_02765 PF00528 Binding-protein-dependent transport system inner membrane component D0784_02770 PF00005 ABC transporter D0784_02775 PF01895 PhoU domain D0784_02790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_02790 PF03466 LysR substrate binding domain D0784_02795 PF03976 Polyphosphate kinase 2 (PPK2) D0784_02800 PF03932 CutC family D0784_02805 PF00578 AhpC/TSA family D0784_02805 PF10417 C-terminal domain of 1-Cys peroxiredoxin D0784_02810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_02810 PF03466 LysR substrate binding domain D0784_02815 PF01274 Malate synthase D0784_02820 PF00463 Isocitrate lyase family D0784_02825 PF00571 CBS domain D0784_02840 PF02547 Queuosine biosynthesis protein D0784_02845 PF01702 Queuine tRNA-ribosyltransferase D0784_02850 PF02699 Preprotein translocase subunit D0784_02855 PF02355 Protein export membrane protein D0784_02855 PF07549 SecD/SecF GG Motif D0784_02855 PF13721 SecD export protein N-terminal TM region D0784_02860 PF07549 SecD/SecF GG Motif D0784_02860 PF02355 Protein export membrane protein D0784_02870 PF00459 Inositol monophosphatase family D0784_02875 PF00588 SpoU rRNA Methylase family D0784_02880 PF02082 Transcriptional regulator D0784_02885 PF00266 Aminotransferase class-V D0784_02890 PF01592 NifU-like N terminal domain D0784_02895 PF01521 Iron-sulphur cluster biosynthesis D0784_02900 PF00226 DnaJ domain D0784_02900 PF07743 HSCB C-terminal oligomerisation domain D0784_02905 PF00012 Hsp70 protein D0784_02910 PF00111 2Fe-2S iron-sulfur cluster binding domain D0784_02915 PF04384 Iron-sulphur cluster assembly D0784_02920 PF12404 Peptidase D0784_02920 PF00883 Cytosol aminopeptidase family, catalytic domain D0784_02925 PF00334 Nucleoside diphosphate kinase D0784_02930 PF04055 Radical SAM superfamily D0784_02935 PF13464 Domain of unknown function (DUF4115) D0784_02940 PF04551 GcpE protein D0784_02945 PF13393 Histidyl-tRNA synthetase D0784_02945 PF03129 Anticodon binding domain D0784_02950 PF09976 Tetratricopeptide repeat-like domain D0784_02955 PF13360 PQQ-like domain D0784_02960 PF01926 50S ribosome-binding GTPase D0784_02960 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal D0784_02970 PF00990 Diguanylate cyclase, GGDEF domain D0784_02970 PF13185 GAF domain D0784_02980 PF02601 Exonuclease VII, large subunit D0784_02980 PF13742 OB-fold nucleic acid binding domain D0784_02985 PF00478 IMP dehydrogenase / GMP reductase domain D0784_02985 PF00571 CBS domain D0784_02990 PF00117 Glutamine amidotransferase class-I D0784_02990 PF00958 GMP synthase C terminal domain D0784_02990 PF02540 NAD synthase D0784_02995 PF03553 Na+/H+ antiporter family D0784_03000 PF06483 Chitinase C D0784_03000 PF00704 Glycosyl hydrolases family 18 D0784_03005 PF01184 GPR1/FUN34/yaaH family D0784_03010 PF01235 Sodium:alanine symporter family D0784_03015 PF01266 FAD dependent oxidoreductase D0784_03020 PF03466 LysR substrate binding domain D0784_03020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_03025 PF12729 Four helix bundle sensory module for signal transduction D0784_03025 PF00672 HAMP domain D0784_03025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0784_03040 PF00924 Mechanosensitive ion channel D0784_03045 PF07969 Amidohydrolase family D0784_03050 PF00202 Aminotransferase class-III D0784_03070 PF12805 FUSC-like inner membrane protein yccS D0784_03075 PF03466 LysR substrate binding domain D0784_03075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_03085 PF01668 SmpB protein D0784_03090 PF03364 Polyketide cyclase / dehydrase and lipid transport D0784_03095 PF03658 RnfH family Ubiquitin D0784_03100 PF04355 SmpA / OmlA family D0784_03110 PF02463 RecF/RecN/SMC N terminal domain D0784_03115 PF01513 ATP-NAD kinase D0784_03120 PF01025 GrpE D0784_03125 PF00375 Sodium:dicarboxylate symporter family D0784_03130 PF00012 Hsp70 protein D0784_03135 PF00226 DnaJ domain D0784_03135 PF01556 DnaJ C terminal domain D0784_03135 PF00684 DnaJ central domain D0784_03140 PF07963 Prokaryotic N-terminal methylation motif D0784_03140 PF00114 Pilin (bacterial filament) D0784_03145 PF00114 Pilin (bacterial filament) D0784_03145 PF07963 Prokaryotic N-terminal methylation motif D0784_03165 PF03806 AbgT putative transporter family D0784_03170 PF14437 MafB19-like deaminase D0784_03180 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0784_03180 PF01464 Transglycosylase SLT domain D0784_03185 PF02769 AIR synthase related protein, C-terminal domain D0784_03185 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal D0784_03185 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain D0784_03210 PF01546 Peptidase family M20/M25/M40 D0784_03210 PF07687 Peptidase dimerisation domain D0784_03215 PF00860 Permease family D0784_03220 PF00156 Phosphoribosyl transferase domain D0784_03230 PF07417 Sigma factor-binding transcriptional regulator Crl D0784_03235 PF01472 PUA domain D0784_03235 PF00696 Amino acid kinase family D0784_03240 PF00171 Aldehyde dehydrogenase family D0784_03245 PF03477 ATP cone domain D0784_03250 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D0784_03250 PF01872 RibD C-terminal domain D0784_03255 PF00677 Lumazine binding domain D0784_03260 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D0784_03260 PF00925 GTP cyclohydrolase II D0784_03265 PF00885 6,7-dimethyl-8-ribityllumazine synthase D0784_03270 PF01029 NusB family D0784_03275 PF00586 AIR synthase related protein, N-terminal domain D0784_03275 PF02769 AIR synthase related protein, C-terminal domain D0784_03280 PF04608 Phosphatidylglycerophosphatase A D0784_03285 PF13292 1-deoxy-D-xylulose-5-phosphate synthase D0784_03285 PF02780 Transketolase, C-terminal domain D0784_03285 PF02779 Transketolase, pyrimidine binding domain D0784_03290 PF00348 Polyprenyl synthetase D0784_03295 PF02609 Exonuclease VII small subunit D0784_03300 PF01618 MotA/TolQ/ExbB proton channel family D0784_03305 PF00691 OmpA family D0784_03305 PF13677 Membrane MotB of proton-channel complex MotA/MotB D0784_03310 PF02568 Thiamine biosynthesis protein (ThiI) D0784_03310 PF02926 THUMP domain D0784_03315 PF03466 LysR substrate binding domain D0784_03315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_03325 PF04241 Protein of unknown function (DUF423) D0784_03330 PF01728 FtsJ-like methyltransferase D0784_03330 PF18125 RlmM ferredoxin-like domain D0784_03335 PF01223 DNA/RNA non-specific endonuclease D0784_03340 PF01367 5'-3' exonuclease, C-terminal SAM fold D0784_03340 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D0784_03345 PF11892 Domain of unknown function (DUF3412) D0784_03345 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases D0784_03345 PF03641 Possible lysine decarboxylase D0784_03350 PF00072 Response regulator receiver domain D0784_03350 PF00990 Diguanylate cyclase, GGDEF domain D0784_03360 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term D0784_03360 PF14489 QueF-like protein D0784_03365 PF07348 Syd protein (SUKH-2) D0784_03370 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) D0784_03375 PF00149 Calcineurin-like phosphoesterase D0784_03375 PF02872 5'-nucleotidase, C-terminal domain D0784_03385 PF03180 NLPA lipoprotein D0784_03390 PF00528 Binding-protein-dependent transport system inner membrane component D0784_03395 PF09383 NIL domain D0784_03395 PF00005 ABC transporter D0784_03405 PF00356 Bacterial regulatory proteins, lacI family D0784_03410 PF02378 Phosphotransferase system, EIIC D0784_03410 PF00367 phosphotransferase system, EIIB D0784_03415 PF00128 Alpha amylase, catalytic domain D0784_03415 PF16657 Maltogenic Amylase, C-terminal domain D0784_03420 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 D0784_03420 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) D0784_03425 PF00464 Serine hydroxymethyltransferase D0784_03430 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family D0784_03430 PF04055 Radical SAM superfamily D0784_03435 PF03099 Biotin/lipoate A/B protein ligase family D0784_03440 PF04359 Protein of unknown function (DUF493) D0784_03445 PF00768 D-alanyl-D-alanine carboxypeptidase D0784_03445 PF07943 Penicillin-binding protein 5, C-terminal domain D0784_03450 PF03330 Lytic transglycolase D0784_03450 PF05036 Sporulation related domain D0784_03455 PF01098 Cell cycle protein D0784_03460 PF03717 Penicillin-binding Protein dimerisation domain D0784_03460 PF00905 Penicillin binding protein transpeptidase domain D0784_03465 PF02590 Predicted SPOUT methyltransferase D0784_03475 PF14840 Processivity clamp loader gamma complex DNA pol III C-term D0784_03475 PF06144 DNA polymerase III, delta subunit D0784_03480 PF04390 Lipopolysaccharide-assembly D0784_03485 PF08264 Anticodon-binding domain of tRNA D0784_03485 PF13603 Leucyl-tRNA synthetase, Domain 2 D0784_03485 PF00133 tRNA synthetases class I (I, L, M and V) D0784_03490 PF07295 Zinc-ribbon containing domain D0784_03495 PF00795 Carbon-nitrogen hydrolase D0784_03500 PF00571 CBS domain D0784_03500 PF03471 Transporter associated domain D0784_03505 PF02130 Uncharacterized protein family UPF0054 D0784_03510 PF02562 PhoH-like protein D0784_03515 PF04055 Radical SAM superfamily D0784_03515 PF01938 TRAM domain D0784_03515 PF00919 Uncharacterized protein family UPF0004 D0784_03525 PF01494 FAD binding domain D0784_03640 PF06071 Protein of unknown function (DUF933) D0784_03640 PF01926 50S ribosome-binding GTPase D0784_03645 PF01195 Peptidyl-tRNA hydrolase D0784_03650 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase D0784_03650 PF14572 Phosphoribosyl synthetase-associated domain D0784_03655 PF08544 GHMP kinases C terminal D0784_03655 PF00288 GHMP kinases N terminal domain D0784_03660 PF03550 Outer membrane lipoprotein LolB D0784_03665 PF01488 Shikimate / quinate 5-dehydrogenase D0784_03665 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain D0784_03665 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain D0784_03670 PF03462 PCRF domain D0784_03670 PF00472 RF-1 domain D0784_03675 PF17827 PrmC N-terminal domain D0784_03675 PF13847 Methyltransferase domain D0784_03680 PF04247 Invasion gene expression up-regulator, SirB D0784_03685 PF13369 Transglutaminase-like superfamily D0784_03690 PF00793 DAHP synthetase I family D0784_03695 PF02872 5'-nucleotidase, C-terminal domain D0784_03695 PF00149 Calcineurin-like phosphoesterase D0784_03700 PF04073 Aminoacyl-tRNA editing domain D0784_03705 PF00849 RNA pseudouridylate synthase D0784_03705 PF01479 S4 domain D0784_03710 PF01713 Smr domain D0784_03735 PF02838 Glycosyl hydrolase family 20, domain 2 D0784_03735 PF00728 Glycosyl hydrolase family 20, catalytic domain D0784_03735 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain D0784_03735 PF03173 Putative carbohydrate binding domain D0784_03750 PF00403 Heavy-metal-associated domain D0784_03760 PF13609 Gram-negative porin D0784_03765 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) D0784_03770 PF00749 tRNA synthetases class I (E and Q), catalytic domain D0784_03780 PF00691 OmpA family D0784_03780 PF01389 OmpA-like transmembrane domain D0784_03825 PF01584 CheW-like domain D0784_03825 PF00072 Response regulator receiver domain D0784_03830 PF01739 CheR methyltransferase, SAM binding domain D0784_03830 PF03705 CheR methyltransferase, all-alpha domain D0784_03835 PF00460 Flagella basal body rod protein D0784_03840 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0784_03840 PF00460 Flagella basal body rod protein D0784_03845 PF13861 FlgD Tudor-like domain D0784_03845 PF13860 FlgD Ig-like domain D0784_03845 PF03963 Flagellar hook capping protein - N-terminal region D0784_03850 PF07559 Flagellar basal body protein FlaE D0784_03850 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0784_03850 PF00460 Flagella basal body rod protein D0784_03855 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0784_03855 PF00460 Flagella basal body rod protein D0784_03860 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0784_03860 PF00460 Flagella basal body rod protein D0784_03865 PF02107 Flagellar L-ring protein D0784_03870 PF02119 Flagellar P-ring protein D0784_03875 PF10135 Rod binding protein D0784_03875 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase D0784_03880 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0784_03880 PF07196 Flagellin hook IN motif D0784_03890 PF00669 Bacterial flagellin N-terminal helical region D0784_03890 PF07196 Flagellin hook IN motif D0784_03890 PF00700 Bacterial flagellin C-terminal helical region D0784_03900 PF00669 Bacterial flagellin N-terminal helical region D0784_03900 PF07196 Flagellin hook IN motif D0784_03900 PF00700 Bacterial flagellin C-terminal helical region D0784_03905 PF00669 Bacterial flagellin N-terminal helical region D0784_03905 PF07196 Flagellin hook IN motif D0784_03905 PF00700 Bacterial flagellin C-terminal helical region D0784_03910 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D0784_03915 PF05524 PEP-utilising enzyme, N-terminal D0784_03915 PF02896 PEP-utilising enzyme, TIM barrel domain D0784_03915 PF00391 PEP-utilising enzyme, mobile domain D0784_03920 PF00381 PTS HPr component phosphorylation site D0784_03930 PF00291 Pyridoxal-phosphate dependent enzyme D0784_03940 PF04354 ZipA, C-terminal FtsZ-binding domain D0784_03945 PF01653 NAD-dependent DNA ligase adenylation domain D0784_03945 PF03120 NAD-dependent DNA ligase OB-fold domain D0784_03945 PF03119 NAD-dependent DNA ligase C4 zinc finger domain D0784_03945 PF00533 BRCA1 C Terminus (BRCT) domain D0784_03945 PF12826 Helix-hairpin-helix motif D0784_03970 PF01145 SPFH domain / Band 7 family D0784_03970 PF16200 C-terminal region of band_7 D0784_03975 PF11658 Cellulose biosynthesis protein BcsG D0784_03990 PF06564 Cellulose biosynthesis protein BcsQ D0784_03995 PF00535 Glycosyl transferase family 2 D0784_03995 PF07238 PilZ domain D0784_03995 PF03552 Cellulose synthase D0784_04000 PF03170 Bacterial cellulose synthase subunit D0784_04005 PF01270 Glycosyl hydrolases family 8 D0784_04010 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) D0784_04015 PF00085 Thioredoxin D0784_04025 PF00106 short chain dehydrogenase D0784_04030 PF01370 NAD dependent epimerase/dehydratase family D0784_04030 PF08338 Domain of unknown function (DUF1731) D0784_04035 PF07556 Protein of unknown function (DUF1538) D0784_04040 PF07556 Protein of unknown function (DUF1538) D0784_04060 PF12850 Calcineurin-like phosphoesterase superfamily domain D0784_04075 PF17323 Trans-membrane regulatory protein ToxS D0784_04080 PF00486 Transcriptional regulatory protein, C terminal D0784_04085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_04085 PF00183 Hsp90 protein D0784_04090 PF05191 Adenylate kinase, active site lid D0784_04095 PF00762 Ferrochelatase D0784_04100 PF00854 POT family D0784_04105 PF02357 Transcription termination factor nusG D0784_04110 PF13537 Glutamine amidotransferase domain D0784_04110 PF00733 Asparagine synthase D0784_04115 PF00999 Sodium/hydrogen exchanger family D0784_04115 PF02254 TrkA-N domain D0784_04120 PF01047 MarR family D0784_04120 PF00480 ROK family D0784_04125 PF01979 Amidohydrolase family D0784_04135 PF00367 phosphotransferase system, EIIB D0784_04135 PF02378 Phosphotransferase system, EIIC D0784_04135 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D0784_04140 PF00749 tRNA synthetases class I (E and Q), catalytic domain D0784_04140 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain D0784_04145 PF01475 Ferric uptake regulator family D0784_04155 PF00258 Flavodoxin D0784_04165 PF00561 alpha/beta hydrolase fold D0784_04175 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D0784_04175 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D0784_04175 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D0784_04175 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D0784_04185 PF01784 NIF3 (NGG1p interacting factor 3) D0784_04190 PF00285 Citrate synthase, C-terminal domain D0784_04195 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D0784_04200 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D0784_04205 PF00890 FAD binding domain D0784_04205 PF02910 Fumarate reductase flavoprotein C-term D0784_04210 PF13085 2Fe-2S iron-sulfur cluster binding domain D0784_04215 PF16078 2-oxoglutarate dehydrogenase N-terminus D0784_04215 PF02779 Transketolase, pyrimidine binding domain D0784_04215 PF16870 2-oxoglutarate dehydrogenase C-terminal D0784_04215 PF00676 Dehydrogenase E1 component D0784_04220 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D0784_04220 PF00364 Biotin-requiring enzyme D0784_04220 PF02817 e3 binding domain D0784_04225 PF00549 CoA-ligase D0784_04225 PF08442 ATP-grasp domain D0784_04230 PF02629 CoA binding domain D0784_04230 PF00549 CoA-ligase D0784_04235 PF00950 ABC 3 transport family D0784_04240 PF00005 ABC transporter D0784_04245 PF01297 Zinc-uptake complex component A periplasmic D0784_04250 PF12833 Helix-turn-helix domain D0784_04250 PF02311 AraC-like ligand binding domain D0784_04255 PF04023 FeoA domain D0784_04260 PF17910 FeoB cytosolic helical domain D0784_04260 PF02421 Ferrous iron transport protein B D0784_04260 PF07670 Nucleoside recognition D0784_04260 PF07664 Ferrous iron transport protein B C terminus D0784_04280 PF05746 DALR anticodon binding domain D0784_04280 PF03485 Arginyl tRNA synthetase N terminal domain D0784_04280 PF00750 tRNA synthetases class I (R) D0784_04290 PF06185 YecM protein D0784_04300 PF00089 Trypsin D0784_04305 PF00551 Formyl transferase D0784_04305 PF01842 ACT domain D0784_04315 PF13307 Helicase C-terminal domain D0784_04315 PF04851 Type III restriction enzyme, res subunit D0784_04320 PF00814 Glycoprotease family D0784_04330 PF03843 Outer membrane lipoprotein Slp family D0784_04335 PF00561 alpha/beta hydrolase fold D0784_04340 PF00501 AMP-binding enzyme D0784_04340 PF13193 AMP-binding enzyme C-terminal domain D0784_04345 PF01612 3'-5' exonuclease D0784_04345 PF00570 HRDC domain D0784_04350 PF03776 Septum formation topological specificity factor MinE D0784_04355 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D0784_04360 PF03775 Septum formation inhibitor MinC, C-terminal domain D0784_04360 PF05209 Septum formation inhibitor MinC, N-terminal domain D0784_04365 PF05166 YcgL domain D0784_04370 PF13406 Transglycosylase SLT domain D0784_04375 PF03466 LysR substrate binding domain D0784_04375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_04380 PF07662 Na+ dependent nucleoside transporter C-terminus D0784_04380 PF01773 Na+ dependent nucleoside transporter N-terminus D0784_04380 PF07670 Nucleoside recognition D0784_04385 PF04480 Protein of unknown function (DUF559) D0784_04390 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain D0784_04390 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain D0784_04425 PF01420 Type I restriction modification DNA specificity domain D0784_04430 PF12161 HsdM N-terminal domain D0784_04430 PF02384 N-6 DNA Methylase D0784_04465 PF04851 Type III restriction enzyme, res subunit D0784_04465 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) D0784_04465 PF00271 Helicase conserved C-terminal domain D0784_04465 PF08463 EcoEI R protein C-terminal D0784_04515 PF01638 HxlR-like helix-turn-helix D0784_04520 PF08240 Alcohol dehydrogenase GroES-like domain D0784_04520 PF00107 Zinc-binding dehydrogenase D0784_04525 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D0784_04530 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D0784_04535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_04535 PF03466 LysR substrate binding domain D0784_04540 PF07690 Major Facilitator Superfamily D0784_04545 PF00106 short chain dehydrogenase D0784_04550 PF01381 Helix-turn-helix D0784_04555 PF13657 HipA N-terminal domain D0784_04555 PF07804 HipA-like C-terminal domain D0784_04590 PF00425 chorismate binding enzyme D0784_04595 PF13193 AMP-binding enzyme C-terminal domain D0784_04595 PF00501 AMP-binding enzyme D0784_04600 PF00550 Phosphopantetheine attachment site D0784_04600 PF00857 Isochorismatase family D0784_04605 PF00975 Thioesterase domain D0784_04605 PF00550 Phosphopantetheine attachment site D0784_04605 PF00668 Condensation domain D0784_04605 PF13193 AMP-binding enzyme C-terminal domain D0784_04605 PF00501 AMP-binding enzyme D0784_04605 PF00501 AMP-binding enzyme D0784_04605 PF13193 AMP-binding enzyme C-terminal domain D0784_04605 PF00668 Condensation domain D0784_04605 PF00550 Phosphopantetheine attachment site D0784_04605 PF00975 Thioesterase domain D0784_04615 PF17837 4'-phosphopantetheinyl transferase N-terminal domain D0784_04615 PF01648 4'-phosphopantetheinyl transferase superfamily D0784_04620 PF00593 TonB dependent receptor D0784_04620 PF07715 TonB-dependent Receptor Plug Domain D0784_04625 PF00571 CBS domain D0784_04625 PF03471 Transporter associated domain D0784_04625 PF01595 Cyclin M transmembrane N-terminal domain D0784_04630 PF00270 DEAD/DEAH box helicase D0784_04630 PF00271 Helicase conserved C-terminal domain D0784_04635 PF02080 TrkA-C domain D0784_04635 PF02254 TrkA-N domain D0784_04640 PF02386 Cation transport protein D0784_04655 PF02696 Uncharacterized ACR, YdiU/UPF0061 family D0784_04660 PF03480 Bacterial extracellular solute-binding protein, family 7 D0784_04665 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D0784_04670 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D0784_04680 PF02954 Bacterial regulatory protein, Fis family D0784_04680 PF00072 Response regulator receiver domain D0784_04680 PF00158 Sigma-54 interaction domain D0784_04685 PF00512 His Kinase A (phospho-acceptor) domain D0784_04685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_04685 PF02743 Cache domain D0784_04690 PF05697 Bacterial trigger factor protein (TF) D0784_04690 PF05698 Bacterial trigger factor protein (TF) C-terminus D0784_04690 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D0784_04695 PF00574 Clp protease D0784_04700 PF06689 ClpX C4-type zinc finger D0784_04700 PF10431 C-terminal, D2-small domain, of ClpB protein D0784_04700 PF07724 AAA domain (Cdc48 subfamily) D0784_04705 PF02190 ATP-dependent protease La (LON) substrate-binding domain D0784_04705 PF05362 Lon protease (S16) C-terminal proteolytic domain D0784_04705 PF00004 ATPase family associated with various cellular activities (AAA) D0784_04710 PF00216 Bacterial DNA-binding protein D0784_04715 PF13145 PPIC-type PPIASE domain D0784_04735 PF13286 Phosphohydrolase-associated domain D0784_04735 PF01966 HD domain D0784_04745 PF00155 Aminotransferase class I and II D0784_04750 PF00425 chorismate binding enzyme D0784_04755 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D0784_04755 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D0784_04755 PF16582 Middle domain of thiamine pyrophosphate D0784_04760 PF12697 Alpha/beta hydrolase family D0784_04765 PF00378 Enoyl-CoA hydratase/isomerase D0784_04770 PF13378 Enolase C-terminal domain-like D0784_04775 PF13193 AMP-binding enzyme C-terminal domain D0784_04775 PF00501 AMP-binding enzyme D0784_04780 PF00367 phosphotransferase system, EIIB D0784_04780 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D0784_04780 PF02378 Phosphotransferase system, EIIC D0784_04785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_04785 PF03466 LysR substrate binding domain D0784_04795 PF03601 Conserved hypothetical protein 698 D0784_04800 PF07690 Major Facilitator Superfamily D0784_04850 PF13533 Biotin-lipoyl like D0784_04855 PF00873 AcrB/AcrD/AcrF family D0784_04875 PF00291 Pyridoxal-phosphate dependent enzyme D0784_04880 PF13404 AsnC-type helix-turn-helix domain D0784_04880 PF01037 Lrp/AsnC ligand binding domain D0784_04890 PF09619 Type III secretion system lipoprotein chaperone (YscW) D0784_04895 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D0784_04905 PF00990 Diguanylate cyclase, GGDEF domain D0784_04905 PF08448 PAS fold D0784_04915 PF08032 RNA 2'-O ribose methyltransferase substrate binding D0784_04915 PF00588 SpoU rRNA Methylase family D0784_04920 PF11953 Domain of unknown function (DUF3470) D0784_04920 PF00037 4Fe-4S binding domain D0784_04930 PF00571 CBS domain D0784_04930 PF00478 IMP dehydrogenase / GMP reductase domain D0784_04935 PF01554 MatE D0784_04940 PF00403 Heavy-metal-associated domain D0784_04945 PF01048 Phosphorylase superfamily D0784_04955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0784_04955 PF00672 HAMP domain D0784_04960 PF01230 HIT domain D0784_04975 PF13036 Peptidoglycan-synthase activator LpoB D0784_04975 PF08139 Prokaryotic membrane lipoprotein lipid attachment site D0784_04985 PF05728 Uncharacterised protein family (UPF0227) D0784_04990 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0784_05005 PF03461 TRCF domain D0784_05005 PF00271 Helicase conserved C-terminal domain D0784_05005 PF02559 CarD-like/TRCF domain D0784_05005 PF00270 DEAD/DEAH box helicase D0784_05005 PF17757 UvrB interaction domain D0784_05015 PF12704 MacB-like periplasmic core domain D0784_05015 PF02687 FtsX-like permease family D0784_05020 PF00005 ABC transporter D0784_05025 PF02687 FtsX-like permease family D0784_05025 PF12704 MacB-like periplasmic core domain D0784_05035 PF03772 Competence protein D0784_05035 PF00753 Metallo-beta-lactamase superfamily D0784_05035 PF13567 Domain of unknown function (DUF4131) D0784_05040 PF00664 ABC transporter transmembrane region D0784_05040 PF00005 ABC transporter D0784_05045 PF02606 Tetraacyldisaccharide-1-P 4'-kinase D0784_05050 PF03966 Trm112p-like protein D0784_05055 PF02348 Cytidylyltransferase D0784_05060 PF04293 SpoVR like protein D0784_05065 PF04285 Protein of unknown function (DUF444) D0784_05070 PF06798 PrkA serine protein kinase C-terminal domain D0784_05070 PF08298 PrkA AAA domain D0784_05080 PF03887 YfbU domain D0784_05090 PF04055 Radical SAM superfamily D0784_05100 PF01228 Glycine radical D0784_05100 PF02901 Pyruvate formate lyase-like D0784_05115 PF00005 ABC transporter D0784_05120 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0784_05125 PF00528 Binding-protein-dependent transport system inner membrane component D0784_05130 PF00528 Binding-protein-dependent transport system inner membrane component D0784_05135 PF03372 Endonuclease/Exonuclease/phosphatase family D0784_05140 PF10689 Protein of unknown function (DUF2496) D0784_05145 PF07445 Primosomal replication protein priC D0784_05150 PF01925 Sulfite exporter TauE/SafE D0784_05155 PF13307 Helicase C-terminal domain D0784_05155 PF06733 DEAD_2 D0784_05165 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) D0784_05170 PF00849 RNA pseudouridylate synthase D0784_05175 PF03971 Monomeric isocitrate dehydrogenase D0784_05180 PF00313 'Cold-shock' DNA-binding domain D0784_05185 PF02617 ATP-dependent Clp protease adaptor protein ClpS D0784_05190 PF17871 AAA lid domain D0784_05190 PF07724 AAA domain (Cdc48 subfamily) D0784_05190 PF02861 Clp amino terminal domain, pathogenicity island component D0784_05190 PF00004 ATPase family associated with various cellular activities (AAA) D0784_05190 PF10431 C-terminal, D2-small domain, of ClpB protein D0784_05195 PF01176 Translation initiation factor 1A / IF-1 D0784_05200 PF04376 Arginine-tRNA-protein transferase, N terminus D0784_05200 PF04377 Arginine-tRNA-protein transferase, C terminus D0784_05205 PF03588 Leucyl/phenylalanyl-tRNA protein transferase D0784_05215 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D0784_05220 PF10692 Protein of unknown function (DUF2498) D0784_05225 PF08272 Topoisomerase I zinc-ribbon-like D0784_05225 PF01751 Toprim domain D0784_05225 PF01131 DNA topoisomerase D0784_05225 PF01396 Topoisomerase DNA binding C4 zinc finger D0784_05230 PF00483 Nucleotidyl transferase D0784_05235 PF00534 Glycosyl transferases group 1 D0784_05235 PF08323 Starch synthase catalytic domain D0784_05255 PF04994 TfoX C-terminal domain D0784_05255 PF04993 TfoX N-terminal domain D0784_05260 PF00356 Bacterial regulatory proteins, lacI family D0784_05265 PF02613 Nitrate reductase delta subunit D0784_05270 PF00072 Response regulator receiver domain D0784_05270 PF00486 Transcriptional regulatory protein, C terminal D0784_05275 PF13006 Insertion element 4 transposase N-terminal D0784_05275 PF01609 Transposase DDE domain D0784_05280 PF02698 DUF218 domain D0784_05290 PF17192 MukF middle domain D0784_05290 PF17193 MukF C-terminal domain D0784_05290 PF03882 MukF winged-helix domain D0784_05295 PF04288 MukE-like family D0784_05300 PF16330 MukB hinge domain D0784_05300 PF04310 MukB N-terminal D0784_05305 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term D0784_05305 PF12833 Helix-turn-helix domain D0784_05310 PF00171 Aldehyde dehydrogenase family D0784_05315 PF00501 AMP-binding enzyme D0784_05315 PF13193 AMP-binding enzyme C-terminal domain D0784_05320 PF05199 GMC oxidoreductase D0784_05320 PF00732 GMC oxidoreductase D0784_05340 PF18030 RimK PreATP-grasp domain D0784_05340 PF08443 RimK-like ATP-grasp domain D0784_05350 PF08003 Protein of unknown function (DUF1698) D0784_05355 PF13649 Methyltransferase domain D0784_05360 PF01904 Protein of unknown function DUF72 D0784_05365 PF00152 tRNA synthetases class II (D, K and N) D0784_05365 PF02938 GAD domain D0784_05365 PF01336 OB-fold nucleic acid binding domain D0784_05370 PF02075 Crossover junction endodeoxyribonuclease RuvC D0784_05375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0784_05375 PF00672 HAMP domain D0784_05375 PF02203 Tar ligand binding domain homologue D0784_05380 PF01330 RuvA N terminal domain D0784_05380 PF07499 RuvA, C-terminal domain D0784_05385 PF05491 RuvB C-terminal winged helix domain D0784_05385 PF05496 Holliday junction DNA helicase RuvB P-loop domain D0784_05385 PF17864 RuvB AAA lid domain D0784_05390 PF01654 Cytochrome bd terminal oxidase subunit I D0784_05395 PF02322 Cytochrome bd terminal oxidase subunit II D0784_05400 PF08173 Membrane bound YbgT-like protein D0784_05410 PF03061 Thioesterase superfamily D0784_05415 PF01618 MotA/TolQ/ExbB proton channel family D0784_05420 PF02472 Biopolymer transport protein ExbD/TolR D0784_05430 PF07676 WD40-like Beta Propeller Repeat D0784_05430 PF04052 TolB amino-terminal domain D0784_05435 PF00691 OmpA family D0784_05440 PF13174 Tetratricopeptide repeat D0784_05440 PF16331 TolA binding protein trimerisation D0784_05445 PF02445 Quinolinate synthetase A protein D0784_05455 PF03994 Domain of Unknown Function (DUF350) D0784_05465 PF03738 Glutathionylspermidine synthase preATP-grasp D0784_05475 PF00512 His Kinase A (phospho-acceptor) domain D0784_05475 PF09308 LuxQ, periplasmic D0784_05475 PF00072 Response regulator receiver domain D0784_05475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_05480 PF06610 L-alanine exporter D0784_05505 PF02384 N-6 DNA Methylase D0784_05510 PF02384 N-6 DNA Methylase D0784_05510 PF12161 HsdM N-terminal domain D0784_05520 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) D0784_05520 PF11867 Domain of unknown function (DUF3387) D0784_05520 PF18766 SWI2/SNF2 ATPase D0784_05560 PF12833 Helix-turn-helix domain D0784_05590 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF D0784_05605 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI D0784_05610 PF01514 Secretory protein of YscJ/FliF family D0784_05620 PF02108 Flagellar assembly protein FliH D0784_05640 PF02661 Fic/DOC family D0784_05655 PF13006 Insertion element 4 transposase N-terminal D0784_05655 PF01609 Transposase DDE domain D0784_05660 PF01312 FlhB HrpN YscU SpaS Family D0784_05665 PF01311 Bacterial export proteins, family 1 D0784_05670 PF01313 Bacterial export proteins, family 3 D0784_05675 PF00813 FliP family D0784_05680 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D0784_05695 PF02874 ATP synthase alpha/beta family, beta-barrel domain D0784_05695 PF18269 T3SS EscN ATPase C-terminal domain D0784_05695 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D0784_05700 PF07201 HrpJ-like domain D0784_05705 PF09059 TyeA D0784_05725 PF00771 FHIPEP family D0784_05730 PF09621 Type III secretion system regulator (LcrR) D0784_05740 PF04792 V antigen (LcrV) protein D0784_05745 PF07720 Tetratricopeptide repeat D0784_05755 PF05844 YopD protein D0784_05765 PF13411 MerR HTH family regulatory protein D0784_05770 PF02627 Carboxymuconolactone decarboxylase family D0784_05775 PF01609 Transposase DDE domain D0784_05775 PF13006 Insertion element 4 transposase N-terminal D0784_05780 PF02264 LamB porin D0784_05780 PF11471 Maltoporin periplasmic N-terminal extension D0784_05785 PF00356 Bacterial regulatory proteins, lacI family D0784_05790 PF00367 phosphotransferase system, EIIB D0784_05790 PF02378 Phosphotransferase system, EIIC D0784_05795 PF00294 pfkB family carbohydrate kinase D0784_05800 PF00251 Glycosyl hydrolases family 32 N-terminal domain D0784_05800 PF08244 Glycosyl hydrolases family 32 C terminal D0784_05805 PF03831 PhnA domain D0784_05805 PF08274 PhnA Zinc-Ribbon D0784_05815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0784_05815 PF02743 Cache domain D0784_05815 PF00672 HAMP domain D0784_05820 PF00529 HlyD membrane-fusion protein of T1SS D0784_05820 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0784_05825 PF00873 AcrB/AcrD/AcrF family D0784_05835 PF00392 Bacterial regulatory proteins, gntR family D0784_05835 PF07729 FCD domain D0784_05840 PF07687 Peptidase dimerisation domain D0784_05840 PF01546 Peptidase family M20/M25/M40 D0784_05845 PF03606 C4-dicarboxylate anaerobic carrier D0784_05860 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0784_05860 PF01464 Transglycosylase SLT domain D0784_05865 PF00141 Peroxidase D0784_05870 PF00579 tRNA synthetases class I (W and Y) D0784_05880 PF03372 Endonuclease/Exonuclease/phosphatase family D0784_05905 PF01752 Collagenase D0784_05905 PF08453 Peptidase family M9 N-terminal D0784_05905 PF04151 Bacterial pre-peptidase C-terminal domain D0784_05910 PF01979 Amidohydrolase family D0784_05925 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) D0784_05935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_05935 PF03466 LysR substrate binding domain D0784_05945 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D0784_05945 PF05222 Alanine dehydrogenase/PNT, N-terminal domain D0784_05950 PF01037 Lrp/AsnC ligand binding domain D0784_05955 PF01580 FtsK/SpoIIIE family D0784_05955 PF13491 4TM region of DNA translocase FtsK/SpoIIIE D0784_05955 PF17854 FtsK alpha domain D0784_05955 PF09397 Ftsk gamma domain D0784_05960 PF03548 Outer membrane lipoprotein carrier protein LolA D0784_05965 PF00004 ATPase family associated with various cellular activities (AAA) D0784_05965 PF16193 AAA C-terminal domain D0784_05965 PF12002 MgsA AAA+ ATPase C terminal D0784_05970 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D0784_05970 PF02403 Seryl-tRNA synthetase N-terminal domain D0784_05985 PF01258 Prokaryotic dksA/traR C4-type zinc finger D0784_05990 PF00202 Aminotransferase class-III D0784_05995 PF04055 Radical SAM superfamily D0784_05995 PF06968 Biotin and Thiamin Synthesis associated domain D0784_06000 PF00155 Aminotransferase class I and II D0784_06005 PF08241 Methyltransferase domain D0784_06020 PF01435 Peptidase family M48 D0784_06030 PF00106 short chain dehydrogenase D0784_06065 PF00206 Lyase D0784_06065 PF08328 Adenylosuccinate lyase C-terminal D0784_06070 PF04356 Protein of unknown function (DUF489) D0784_06085 PF00294 pfkB family carbohydrate kinase D0784_06090 PF00816 H-NS histone family D0784_06095 PF03553 Na+/H+ antiporter family D0784_06100 PF02954 Bacterial regulatory protein, Fis family D0784_06100 PF00072 Response regulator receiver domain D0784_06100 PF00158 Sigma-54 interaction domain D0784_06105 PF08029 HisG, C-terminal domain D0784_06105 PF01634 ATP phosphoribosyltransferase D0784_06110 PF00815 Histidinol dehydrogenase D0784_06115 PF00155 Aminotransferase class I and II D0784_06120 PF00475 Imidazoleglycerol-phosphate dehydratase D0784_06120 PF08645 Polynucleotide kinase 3 phosphatase D0784_06125 PF00117 Glutamine amidotransferase class-I D0784_06130 PF00977 Histidine biosynthesis protein D0784_06135 PF00977 Histidine biosynthesis protein D0784_06140 PF01502 Phosphoribosyl-AMP cyclohydrolase D0784_06140 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase D0784_06145 PF02810 SEC-C motif D0784_06150 PF08668 HDOD domain D0784_06150 PF00563 EAL domain D0784_06155 PF00149 Calcineurin-like phosphoesterase D0784_06160 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D0784_06165 PF09190 DALR domain D0784_06165 PF01406 tRNA synthetases class I (C) catalytic domain D0784_06170 PF00265 Thymidine kinase D0784_06175 PF02698 DUF218 domain D0784_06200 PF01226 Formate/nitrite transporter D0784_06205 PF03649 Uncharacterised protein family (UPF0014) D0784_06210 PF06796 Periplasmic nitrate reductase protein NapE D0784_06215 PF03264 NapC/NirT cytochrome c family, N-terminal region D0784_06225 PF16875 Glycosyl hydrolase family 36 N-terminal domain D0784_06225 PF16874 Glycosyl hydrolase family 36 C-terminal domain D0784_06235 PF02833 DHHA2 domain D0784_06235 PF01368 DHH family D0784_06245 PF00005 ABC transporter D0784_06250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0784_06250 PF00005 ABC transporter D0784_06255 PF12911 N-terminal TM domain of oligopeptide transport permease C D0784_06255 PF00528 Binding-protein-dependent transport system inner membrane component D0784_06260 PF00528 Binding-protein-dependent transport system inner membrane component D0784_06265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0784_06270 PF02954 Bacterial regulatory protein, Fis family D0784_06270 PF00158 Sigma-54 interaction domain D0784_06275 PF04012 PspA/IM30 family D0784_06280 PF06667 Phage shock protein B D0784_06285 PF04024 PspC domain D0784_06295 PF13533 Biotin-lipoyl like D0784_06300 PF00873 AcrB/AcrD/AcrF family D0784_06305 PF03352 Methyladenine glycosylase D0784_06315 PF01053 Cys/Met metabolism PLP-dependent enzyme D0784_06320 PF13091 PLD-like domain D0784_06320 PF13396 Phospholipase_D-nuclease N-terminal D0784_06325 PF00209 Sodium:neurotransmitter symporter family D0784_06330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0784_06330 PF00672 HAMP domain D0784_06330 PF12729 Four helix bundle sensory module for signal transduction D0784_06335 PF00849 RNA pseudouridylate synthase D0784_06345 PF00111 2Fe-2S iron-sulfur cluster binding domain D0784_06345 PF00175 Oxidoreductase NAD-binding domain D0784_06345 PF00970 Oxidoreductase FAD-binding domain D0784_06350 PF03063 Prismane/CO dehydrogenase family D0784_06355 PF00158 Sigma-54 interaction domain D0784_06355 PF01590 GAF domain D0784_06360 PF01066 CDP-alcohol phosphatidyltransferase D0784_06365 PF00005 ABC transporter D0784_06370 PF00528 Binding-protein-dependent transport system inner membrane component D0784_06375 PF13416 Bacterial extracellular solute-binding protein D0784_06380 PF09335 SNARE associated Golgi protein D0784_06390 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D0784_06390 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0784_06400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_06400 PF00512 His Kinase A (phospho-acceptor) domain D0784_06405 PF00072 Response regulator receiver domain D0784_06405 PF00196 Bacterial regulatory proteins, luxR family D0784_06415 PF00916 Sulfate permease family D0784_06415 PF01740 STAS domain D0784_06425 PF06945 Protein of unknown function (DUF1289) D0784_06435 PF02872 5'-nucleotidase, C-terminal domain D0784_06435 PF00149 Calcineurin-like phosphoesterase D0784_06450 PF01386 Ribosomal L25p family D0784_06460 PF00535 Glycosyl transferase family 2 D0784_06460 PF02709 N-terminal domain of galactosyltransferase D0784_06470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_06470 PF00512 His Kinase A (phospho-acceptor) domain D0784_06470 PF00672 HAMP domain D0784_06475 PF00486 Transcriptional regulatory protein, C terminal D0784_06475 PF00072 Response regulator receiver domain D0784_06485 PF08448 PAS fold D0784_06485 PF00990 Diguanylate cyclase, GGDEF domain D0784_06490 PF04851 Type III restriction enzyme, res subunit D0784_06490 PF00271 Helicase conserved C-terminal domain D0784_06495 PF01479 S4 domain D0784_06495 PF00849 RNA pseudouridylate synthase D0784_06500 PF07690 Major Facilitator Superfamily D0784_06510 PF01734 Patatin-like phospholipase D0784_06515 PF11066 Protein of unknown function (DUF2867) D0784_06515 PF13460 NAD(P)H-binding D0784_06520 PF01554 MatE D0784_06525 PF00005 ABC transporter D0784_06540 PF06965 Na+/H+ antiporter 1 D0784_06545 PF00440 Bacterial regulatory proteins, tetR family D0784_06545 PF16295 Tetracyclin repressor-like, C-terminal domain D0784_06550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D0784_06550 PF09317 Domain of unknown function (DUF1974) D0784_06550 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D0784_06550 PF02770 Acyl-CoA dehydrogenase, middle domain D0784_06555 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase D0784_06555 PF12241 Trans-2-enoyl-CoA reductase catalytic region D0784_06555 PF07055 Enoyl reductase FAD binding domain D0784_06560 PF02080 TrkA-C domain D0784_06560 PF06826 Predicted Permease Membrane Region D0784_06565 PF00462 Glutaredoxin D0784_06570 PF00465 Iron-containing alcohol dehydrogenase D0784_06575 PF01418 Helix-turn-helix domain, rpiR family D0784_06575 PF01380 SIS domain D0784_06580 PF00282 Pyridoxal-dependent decarboxylase conserved domain D0784_06590 PF03956 Lysine exporter LysO D0784_06605 PF04994 TfoX C-terminal domain D0784_06605 PF04993 TfoX N-terminal domain D0784_06620 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0784_06620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_06620 PF00512 His Kinase A (phospho-acceptor) domain D0784_06630 PF00266 Aminotransferase class-V D0784_06645 PF00990 Diguanylate cyclase, GGDEF domain D0784_06645 PF08447 PAS fold D0784_06645 PF08448 PAS fold D0784_06645 PF00563 EAL domain D0784_06675 PF12792 CSS motif domain associated with EAL D0784_06675 PF00563 EAL domain D0784_06680 PF03466 LysR substrate binding domain D0784_06680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_06685 PF02447 GntP family permease D0784_06690 PF00291 Pyridoxal-phosphate dependent enzyme D0784_06695 PF00005 ABC transporter D0784_06695 PF00664 ABC transporter transmembrane region D0784_06700 PF00005 ABC transporter D0784_06700 PF00664 ABC transporter transmembrane region D0784_06705 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0784_06715 PF00266 Aminotransferase class-V D0784_06725 PF08448 PAS fold D0784_06725 PF00990 Diguanylate cyclase, GGDEF domain D0784_06730 PF00939 Sodium:sulfate symporter transmembrane region D0784_06735 PF02698 DUF218 domain D0784_06740 PF03949 Malic enzyme, NAD binding domain D0784_06740 PF00390 Malic enzyme, N-terminal domain D0784_06745 PF00271 Helicase conserved C-terminal domain D0784_06745 PF04408 Helicase associated domain (HA2) D0784_06745 PF11898 Domain of unknown function (DUF3418) D0784_06745 PF00270 DEAD/DEAH box helicase D0784_06745 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold D0784_06750 PF02253 Phospholipase A1 D0784_06760 PF09423 PhoD-like phosphatase D0784_06760 PF16655 PhoD-like phosphatase, N-terminal domain D0784_06765 PF01259 SAICAR synthetase D0784_06790 PF05736 OprF membrane domain D0784_06790 PF00691 OmpA family D0784_06805 PF01565 FAD binding domain D0784_06805 PF02913 FAD linked oxidases, C-terminal domain D0784_06805 PF13183 4Fe-4S dicluster domain D0784_06825 PF03496 ADP-ribosyltransferase exoenzyme D0784_06830 PF03496 ADP-ribosyltransferase exoenzyme D0784_06850 PF00221 Aromatic amino acid lyase D0784_06855 PF01175 Urocanase Rossmann-like domain D0784_06855 PF17392 Urocanase C-terminal domain D0784_06855 PF17391 Urocanase N-terminal domain D0784_06860 PF00491 Arginase family D0784_06865 PF01979 Amidohydrolase family D0784_06870 PF07702 UTRA domain D0784_06870 PF00392 Bacterial regulatory proteins, gntR family D0784_06880 PF02824 TGS domain D0784_06880 PF03129 Anticodon binding domain D0784_06880 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D0784_06880 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D0784_06885 PF00707 Translation initiation factor IF-3, C-terminal domain D0784_06885 PF05198 Translation initiation factor IF-3, N-terminal domain D0784_06890 PF01632 Ribosomal protein L35 D0784_06895 PF00453 Ribosomal protein L20 D0784_06910 PF01042 Endoribonuclease L-PSP D0784_06915 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0784_06920 PF01906 Putative heavy-metal-binding D0784_06950 PF17158 Membrane-associated sensor, integral membrane domain D0784_06950 PF00990 Diguanylate cyclase, GGDEF domain D0784_06955 PF01409 tRNA synthetases class II core domain (F) D0784_06955 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain D0784_06960 PF01588 Putative tRNA binding domain D0784_06960 PF03147 Ferredoxin-fold anticodon binding domain D0784_06960 PF03483 B3/4 domain D0784_06960 PF03484 tRNA synthetase B5 domain D0784_06960 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain D0784_06965 PF00857 Isochorismatase family D0784_06965 PF00550 Phosphopantetheine attachment site D0784_06970 PF00005 ABC transporter D0784_06970 PF00664 ABC transporter transmembrane region D0784_06975 PF00005 ABC transporter D0784_06980 PF00282 Pyridoxal-dependent decarboxylase conserved domain D0784_06985 PF00668 Condensation domain D0784_06985 PF00550 Phosphopantetheine attachment site D0784_06985 PF00501 AMP-binding enzyme D0784_06990 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) D0784_06995 PF00975 Thioesterase domain D0784_07000 PF00501 AMP-binding enzyme D0784_07000 PF00668 Condensation domain D0784_07000 PF13193 AMP-binding enzyme C-terminal domain D0784_07005 PF07715 TonB-dependent Receptor Plug Domain D0784_07005 PF00593 TonB dependent receptor D0784_07010 PF01497 Periplasmic binding protein D0784_07015 PF01032 FecCD transport family D0784_07020 PF01032 FecCD transport family D0784_07025 PF13193 AMP-binding enzyme C-terminal domain D0784_07025 PF00668 Condensation domain D0784_07025 PF00550 Phosphopantetheine attachment site D0784_07025 PF00501 AMP-binding enzyme D0784_07040 PF00216 Bacterial DNA-binding protein D0784_07050 PF05724 Thiopurine S-methyltransferase (TPMT) D0784_07055 PF02222 ATP-grasp domain D0784_07065 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D0784_07065 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region D0784_07070 PF04172 LrgB-like family D0784_07075 PF03788 LrgA family D0784_07080 PF08411 Exonuclease C-terminal D0784_07080 PF00929 Exonuclease D0784_07095 PF13460 NAD(P)H-binding D0784_07100 PF01613 Flavin reductase like domain D0784_07105 PF02277 Phosphoribosyltransferase D0784_07110 PF02654 Cobalamin-5-phosphate synthase D0784_07115 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase D0784_07130 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family D0784_07135 PF01032 FecCD transport family D0784_07140 PF00005 ABC transporter D0784_07165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_07165 PF03466 LysR substrate binding domain D0784_07200 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase D0784_07205 PF16363 GDP-mannose 4,6 dehydratase D0784_07210 PF04991 LicD family D0784_07215 PF01863 Protein of unknown function DUF45 D0784_07220 PF05971 RNA methyltransferase D0784_07225 PF00072 Response regulator receiver domain D0784_07225 PF00990 Diguanylate cyclase, GGDEF domain D0784_07240 PF01048 Phosphorylase superfamily D0784_07260 PF00041 Fibronectin type III domain D0784_07260 PF12561 ToxR activated gene A lipoprotein domain D0784_07265 PF01546 Peptidase family M20/M25/M40 D0784_07265 PF07687 Peptidase dimerisation domain D0784_07275 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0784_07280 PF04209 homogentisate 1,2-dioxygenase D0784_07290 PF02798 Glutathione S-transferase, N-terminal domain D0784_07290 PF14497 Glutathione S-transferase, C-terminal domain D0784_07315 PF03616 Sodium/glutamate symporter D0784_07325 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0784_07330 PF00873 AcrB/AcrD/AcrF family D0784_07365 PF00117 Glutamine amidotransferase class-I D0784_07365 PF03352 Methyladenine glycosylase D0784_07365 PF13302 Acetyltransferase (GNAT) domain D0784_07365 PF13673 Acetyltransferase (GNAT) domain D0784_07365 PF00958 GMP synthase C terminal domain D0784_07370 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family D0784_07380 PF00924 Mechanosensitive ion channel D0784_07385 PF03729 Short repeat of unknown function (DUF308) D0784_07405 PF01047 MarR family D0784_07420 PF01928 CYTH domain D0784_07430 PF12464 Maltose acetyltransferase D0784_07430 PF00132 Bacterial transferase hexapeptide (six repeats) D0784_07450 PF00512 His Kinase A (phospho-acceptor) domain D0784_07450 PF01627 Hpt domain D0784_07450 PF00072 Response regulator receiver domain D0784_07450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_07450 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D0784_07450 PF00672 HAMP domain D0784_07455 PF13188 PAS domain D0784_07455 PF00563 EAL domain D0784_07455 PF00990 Diguanylate cyclase, GGDEF domain D0784_07455 PF03707 Bacterial signalling protein N terminal repeat D0784_07480 PF17291 N-terminal domain of M60-like peptidases D0784_07480 PF13322 Domain of unknown function (DUF4092) D0784_07480 PF13402 Peptidase M60, enhancin and enhancin-like D0784_07490 PF02397 Bacterial sugar transferase D0784_07500 PF13439 Glycosyltransferase Family 4 D0784_07500 PF00534 Glycosyl transferases group 1 D0784_07530 PF13439 Glycosyltransferase Family 4 D0784_07530 PF00534 Glycosyl transferases group 1 D0784_07535 PF13439 Glycosyltransferase Family 4 D0784_07535 PF00534 Glycosyl transferases group 1 D0784_07540 PF00158 Sigma-54 interaction domain D0784_07540 PF02954 Bacterial regulatory protein, Fis family D0784_07540 PF00072 Response regulator receiver domain D0784_07555 PF02563 Polysaccharide biosynthesis/export protein D0784_07555 PF10531 SLBB domain D0784_07560 PF00691 OmpA family D0784_07565 PF01740 STAS domain D0784_07570 PF01068 ATP dependent DNA ligase domain D0784_07570 PF14743 DNA ligase OB-like domain D0784_07580 PF01554 MatE D0784_07585 PF00677 Lumazine binding domain D0784_07600 PF00072 Response regulator receiver domain D0784_07600 PF01339 CheB methylesterase D0784_07605 PF00990 Diguanylate cyclase, GGDEF domain D0784_07605 PF05230 MASE2 domain D0784_07615 PF00877 NlpC/P60 family D0784_07620 PF00672 HAMP domain D0784_07620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0784_07625 PF00293 NUDIX domain D0784_07670 PF00480 ROK family D0784_07680 PF00994 Probable molybdopterin binding domain D0784_07680 PF03454 MoeA C-terminal region (domain IV) D0784_07680 PF03453 MoeA N-terminal region (domain I and II) D0784_07685 PF12804 MobA-like NTP transferase domain D0784_07690 PF08402 TOBE domain D0784_07690 PF00005 ABC transporter D0784_07695 PF00528 Binding-protein-dependent transport system inner membrane component D0784_07700 PF12849 PBP superfamily domain D0784_07705 PF02954 Bacterial regulatory protein, Fis family D0784_07705 PF00072 Response regulator receiver domain D0784_07705 PF00158 Sigma-54 interaction domain D0784_07710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_07710 PF00512 His Kinase A (phospho-acceptor) domain D0784_07730 PF00005 ABC transporter D0784_07730 PF12848 ABC transporter D0784_07740 PF00884 Sulfatase D0784_07745 PF02634 FdhD/NarQ family D0784_07765 PF02613 Nitrate reductase delta subunit D0784_07775 PF00384 Molybdopterin oxidoreductase D0784_07775 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D0784_07775 PF01568 Molydopterin dinucleotide binding domain D0784_07780 PF13247 4Fe-4S dicluster domain D0784_07800 PF02146 Sir2 family D0784_07805 PF13416 Bacterial extracellular solute-binding protein D0784_07810 PF13416 Bacterial extracellular solute-binding protein D0784_07815 PF00528 Binding-protein-dependent transport system inner membrane component D0784_07820 PF00528 Binding-protein-dependent transport system inner membrane component D0784_07825 PF00005 ABC transporter D0784_07825 PF08402 TOBE domain D0784_07845 PF01171 PP-loop family D0784_07850 PF00582 Universal stress protein family D0784_07855 PF13545 Crp-like helix-turn-helix domain D0784_07855 PF00027 Cyclic nucleotide-binding domain D0784_07870 PF00403 Heavy-metal-associated domain D0784_07880 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP D0784_07880 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D0784_07895 PF00115 Cytochrome C and Quinol oxidase polypeptide I D0784_07910 PF09308 LuxQ, periplasmic D0784_07910 PF00072 Response regulator receiver domain D0784_07910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_07910 PF00512 His Kinase A (phospho-acceptor) domain D0784_07940 PF17414 MatP C-terminal ribbon-helix-helix domain D0784_07940 PF06303 MatP N-terminal domain D0784_07945 PF13654 AAA domain D0784_07945 PF05362 Lon protease (S16) C-terminal proteolytic domain D0784_07950 PF07977 FabA-like domain D0784_07955 PF04957 Ribosome modulation factor D0784_07975 PF01170 Putative RNA methylase family UPF0020 D0784_07975 PF02926 THUMP domain D0784_07975 PF10672 S-adenosylmethionine-dependent methyltransferase D0784_07980 PF07126 Cell-division protein ZapC D0784_07985 PF01180 Dihydroorotate dehydrogenase D0784_07990 PF05088 Bacterial NAD-glutamate dehydrogenase D0784_08000 PF11940 Domain of unknown function (DUF3458) Ig-like fold D0784_08000 PF17432 Domain of unknown function (DUF3458_C) ARM repeats D0784_08000 PF01433 Peptidase family M1 domain D0784_08010 PF00595 PDZ domain D0784_08010 PF17804 Tail specific protease N-terminal domain D0784_08010 PF11818 C-terminal domain of tail specific protease (DUF3340) D0784_08010 PF03572 Peptidase family S41 D0784_08015 PF04352 ProQ/FINO family D0784_08015 PF17516 ProQ C-terminal domain D0784_08020 PF13185 GAF domain D0784_08025 PF00005 ABC transporter D0784_08025 PF00664 ABC transporter transmembrane region D0784_08030 PF04403 Paraquat-inducible protein A D0784_08035 PF02470 MlaD protein D0784_08040 PF01189 16S rRNA methyltransferase RsmB/F D0784_08040 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF D0784_08040 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF D0784_08060 PF00793 DAHP synthetase I family D0784_08065 PF04461 Protein of unknown function (DUF520) D0784_08070 PF14824 Sirohaem biosynthesis protein central D0784_08070 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D0784_08070 PF10414 Sirohaem synthase dimerisation region D0784_08080 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0784_08085 PF00528 Binding-protein-dependent transport system inner membrane component D0784_08090 PF00528 Binding-protein-dependent transport system inner membrane component D0784_08095 PF00005 ABC transporter D0784_08100 PF01027 Inhibitor of apoptosis-promoting Bax1 D0784_08110 PF04358 DsrC like protein D0784_08115 PF00708 Acylphosphatase D0784_08120 PF02743 Cache domain D0784_08120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0784_08120 PF00672 HAMP domain D0784_08130 PF10672 S-adenosylmethionine-dependent methyltransferase D0784_08130 PF17785 PUA-like domain D0784_08145 PF05736 OprF membrane domain D0784_08145 PF00691 OmpA family D0784_08160 PF05736 OprF membrane domain D0784_08160 PF00691 OmpA family D0784_08170 PF00990 Diguanylate cyclase, GGDEF domain D0784_08170 PF17158 Membrane-associated sensor, integral membrane domain D0784_08175 PF06508 Queuosine biosynthesis protein QueC D0784_08180 PF04055 Radical SAM superfamily D0784_08195 PF00089 Trypsin D0784_08200 PF00583 Acetyltransferase (GNAT) family D0784_08205 PF00884 Sulfatase D0784_08210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_08210 PF03466 LysR substrate binding domain D0784_08215 PF13193 AMP-binding enzyme C-terminal domain D0784_08215 PF00501 AMP-binding enzyme D0784_08215 PF16177 Acetyl-coenzyme A synthetase N-terminus D0784_08220 PF04303 PrpF protein D0784_08225 PF00330 Aconitase family (aconitate hydratase) D0784_08225 PF00694 Aconitase C-terminal domain D0784_08230 PF00285 Citrate synthase, C-terminal domain D0784_08250 PF04717 Type VI secretion system, phage-baseplate injector D0784_08250 PF16671 Actin cross-linking domain D0784_08305 PF00004 ATPase family associated with various cellular activities (AAA) D0784_08305 PF07724 AAA domain (Cdc48 subfamily) D0784_08305 PF17871 AAA lid domain D0784_08305 PF10431 C-terminal, D2-small domain, of ClpB protein D0784_08340 PF00069 Protein kinase domain D0784_08340 PF03793 PASTA domain D0784_08375 PF01970 Tripartite tricarboxylate transporter TctA family D0784_08380 PF01925 Sulfite exporter TauE/SafE D0784_08385 PF16868 NMT1-like family D0784_08390 PF00171 Aldehyde dehydrogenase family D0784_08395 PF01590 GAF domain D0784_08395 PF02954 Bacterial regulatory protein, Fis family D0784_08395 PF00158 Sigma-54 interaction domain D0784_08425 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain D0784_08425 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D0784_08430 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D0784_08435 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain D0784_08435 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain D0784_08440 PF12431 Transcriptional regulator D0784_08440 PF00072 Response regulator receiver domain D0784_08445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_08445 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain D0784_08445 PF17203 Single cache domain 3 D0784_08445 PF00989 PAS fold D0784_08460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0784_08500 PF01794 Ferric reductase like transmembrane component D0784_08505 PF00174 Oxidoreductase molybdopterin binding domain D0784_08550 PF04151 Bacterial pre-peptidase C-terminal domain D0784_08550 PF05922 Peptidase inhibitor I9 D0784_08550 PF00082 Subtilase family D0784_08555 PF00034 Cytochrome c D0784_08555 PF03150 Di-haem cytochrome c peroxidase D0784_08565 PF13840 ACT domain D0784_08565 PF00696 Amino acid kinase family D0784_08570 PF06339 Ectoine synthase D0784_08575 PF00202 Aminotransferase class-III D0784_08580 PF00583 Acetyltransferase (GNAT) family D0784_08585 PF02028 BCCT, betaine/carnitine/choline family transporter D0784_08595 PF00571 CBS domain D0784_08600 PF01554 MatE D0784_08605 PF01406 tRNA synthetases class I (C) catalytic domain D0784_08610 PF00884 Sulfatase D0784_08635 PF01235 Sodium:alanine symporter family D0784_08650 PF01117 Aerolysin toxin D0784_08650 PF03440 Aerolysin/Pertussis toxin (APT) domain D0784_08655 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D0784_08660 PF01117 Aerolysin toxin D0784_08660 PF03440 Aerolysin/Pertussis toxin (APT) domain D0784_08670 PF01810 LysE type translocator D0784_08675 PF02074 Carboxypeptidase Taq (M32) metallopeptidase D0784_08690 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0784_08695 PF03279 Bacterial lipid A biosynthesis acyltransferase D0784_08700 PF01810 LysE type translocator D0784_08705 PF13520 Amino acid permease D0784_08710 PF00893 Small Multidrug Resistance protein D0784_08730 PF04204 Homoserine O-succinyltransferase D0784_08760 PF00271 Helicase conserved C-terminal domain D0784_08760 PF11898 Domain of unknown function (DUF3418) D0784_08760 PF04408 Helicase associated domain (HA2) D0784_08760 PF00270 DEAD/DEAH box helicase D0784_08760 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold D0784_08765 PF02525 Flavodoxin-like fold D0784_08775 PF02613 Nitrate reductase delta subunit D0784_08780 PF04976 DMSO reductase anchor subunit (DmsC) D0784_08785 PF13247 4Fe-4S dicluster domain D0784_08785 PF12800 4Fe-4S binding domain D0784_08790 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D0784_08790 PF01568 Molydopterin dinucleotide binding domain D0784_08790 PF00384 Molybdopterin oxidoreductase D0784_08795 PF00933 Glycosyl hydrolase family 3 N terminal domain D0784_08795 PF14310 Fibronectin type III-like domain D0784_08795 PF01915 Glycosyl hydrolase family 3 C-terminal domain D0784_08805 PF00528 Binding-protein-dependent transport system inner membrane component D0784_08810 PF00528 Binding-protein-dependent transport system inner membrane component D0784_08815 PF13416 Bacterial extracellular solute-binding protein D0784_08820 PF00356 Bacterial regulatory proteins, lacI family D0784_08825 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain D0784_08830 PF03459 TOBE domain D0784_08830 PF17912 MalK OB fold domain D0784_08830 PF00005 ABC transporter D0784_08850 PF07504 Fungalysin/Thermolysin Propeptide Motif D0784_08850 PF04151 Bacterial pre-peptidase C-terminal domain D0784_08850 PF03413 Peptidase propeptide and YPEB domain D0784_08850 PF01447 Thermolysin metallopeptidase, catalytic domain D0784_08850 PF02868 Thermolysin metallopeptidase, alpha-helical domain D0784_08880 PF00990 Diguanylate cyclase, GGDEF domain D0784_08890 PF00012 Hsp70 protein D0784_08895 PF00012 Hsp70 protein D0784_08910 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D0784_08910 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D0784_08920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_08920 PF03466 LysR substrate binding domain D0784_08930 PF00664 ABC transporter transmembrane region D0784_08930 PF00005 ABC transporter D0784_08935 PF00664 ABC transporter transmembrane region D0784_08935 PF00005 ABC transporter D0784_08955 PF03222 Tryptophan/tyrosine permease family D0784_08960 PF00465 Iron-containing alcohol dehydrogenase D0784_08965 PF00106 short chain dehydrogenase D0784_08970 PF01966 HD domain D0784_08980 PF03741 Integral membrane protein TerC family D0784_08985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_08985 PF03466 LysR substrate binding domain D0784_08990 PF04055 Radical SAM superfamily D0784_08995 PF11230 Protein of unknown function (DUF3029) D0784_09000 PF01810 LysE type translocator D0784_09005 PF11871 Domain of unknown function (DUF3391) D0784_09005 PF01966 HD domain D0784_09010 PF00563 EAL domain D0784_09010 PF00990 Diguanylate cyclase, GGDEF domain D0784_09010 PF03707 Bacterial signalling protein N terminal repeat D0784_09015 PF00158 Sigma-54 interaction domain D0784_09015 PF00072 Response regulator receiver domain D0784_09015 PF02954 Bacterial regulatory protein, Fis family D0784_09020 PF00512 His Kinase A (phospho-acceptor) domain D0784_09020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_09020 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0784_09025 PF00939 Sodium:sulfate symporter transmembrane region D0784_09030 PF00583 Acetyltransferase (GNAT) family D0784_09060 PF03575 Peptidase family S51 D0784_09075 PF00106 short chain dehydrogenase D0784_09120 PF00293 NUDIX domain D0784_09165 PF13333 Integrase core domain D0784_09165 PF00665 Integrase core domain D0784_09165 PF13276 HTH-like domain D0784_09225 PF05016 ParE toxin of type II toxin-antitoxin system, parDE D0784_09275 PF00293 NUDIX domain D0784_09300 PF13276 HTH-like domain D0784_09300 PF00665 Integrase core domain D0784_09300 PF13333 Integrase core domain D0784_09350 PF13302 Acetyltransferase (GNAT) domain D0784_09350 PF03352 Methyladenine glycosylase D0784_09350 PF13673 Acetyltransferase (GNAT) domain D0784_09350 PF00958 GMP synthase C terminal domain D0784_09350 PF00117 Glutamine amidotransferase class-I D0784_09380 PF05016 ParE toxin of type II toxin-antitoxin system, parDE D0784_09390 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA D0784_09395 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system D0784_09450 PF08378 Nuclease-related domain D0784_09455 PF00132 Bacterial transferase hexapeptide (six repeats) D0784_09460 PF13276 HTH-like domain D0784_09460 PF00665 Integrase core domain D0784_09460 PF13333 Integrase core domain D0784_09635 PF00293 NUDIX domain D0784_09680 PF13333 Integrase core domain D0784_09680 PF00665 Integrase core domain D0784_09680 PF13276 HTH-like domain D0784_09725 PF00293 NUDIX domain D0784_09785 PF00589 Phage integrase family D0784_09785 PF13495 Phage integrase, N-terminal SAM-like domain D0784_09800 PF13302 Acetyltransferase (GNAT) domain D0784_09805 PF00158 Sigma-54 interaction domain D0784_09805 PF18024 Helix-turn-helix domain D0784_09810 PF05128 Domain of unknown function (DUF697) D0784_09815 PF04317 YcjX-like family, DUF463 D0784_09830 PF04715 Anthranilate synthase component I, N terminal region D0784_09830 PF00425 chorismate binding enzyme D0784_09835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_09835 PF00512 His Kinase A (phospho-acceptor) domain D0784_09835 PF09308 LuxQ, periplasmic D0784_09835 PF00072 Response regulator receiver domain D0784_09845 PF00293 NUDIX domain D0784_09850 PF03222 Tryptophan/tyrosine permease family D0784_09855 PF03313 Serine dehydratase alpha chain D0784_09855 PF03315 Serine dehydratase beta chain D0784_09860 PF03707 Bacterial signalling protein N terminal repeat D0784_09860 PF00563 EAL domain D0784_09860 PF00990 Diguanylate cyclase, GGDEF domain D0784_09870 PF00196 Bacterial regulatory proteins, luxR family D0784_09870 PF00072 Response regulator receiver domain D0784_09875 PF01242 6-pyruvoyl tetrahydropterin synthase D0784_09880 PF02743 Cache domain D0784_09880 PF00672 HAMP domain D0784_09880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0784_09885 PF00152 tRNA synthetases class II (D, K and N) D0784_09885 PF01336 OB-fold nucleic acid binding domain D0784_09900 PF00392 Bacterial regulatory proteins, gntR family D0784_09900 PF00155 Aminotransferase class I and II D0784_09920 PF00155 Aminotransferase class I and II D0784_09940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0784_09940 PF00672 HAMP domain D0784_09945 PF02028 BCCT, betaine/carnitine/choline family transporter D0784_09950 PF01047 MarR family D0784_09955 PF00196 Bacterial regulatory proteins, luxR family D0784_09955 PF00072 Response regulator receiver domain D0784_09960 PF17200 Single Cache domain 2 D0784_09960 PF07730 Histidine kinase D0784_09965 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D0784_09975 PF03480 Bacterial extracellular solute-binding protein, family 7 D0784_09990 PF00753 Metallo-beta-lactamase superfamily D0784_09995 PF05951 Bacterial protein of unknown function (DUF882) D0784_10000 PF01471 Putative peptidoglycan binding domain D0784_10000 PF03734 L,D-transpeptidase catalytic domain D0784_10025 PF00925 GTP cyclohydrolase II D0784_10035 PF03918 Cytochrome C biogenesis protein D0784_10040 PF08534 Redoxin D0784_10045 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal D0784_10045 PF01578 Cytochrome C assembly protein D0784_10050 PF03916 Polysulphide reductase, NrfD D0784_10055 PF13247 4Fe-4S dicluster domain D0784_10065 PF02335 Cytochrome c552 D0784_10080 PF03989 DNA gyrase C-terminal domain, beta-propeller D0784_10080 PF00521 DNA gyrase/topoisomerase IV, subunit A D0784_10095 PF00317 Ribonucleotide reductase, all-alpha domain D0784_10095 PF02867 Ribonucleotide reductase, barrel domain D0784_10095 PF03477 ATP cone domain D0784_10100 PF00268 Ribonucleotide reductase, small chain D0784_10110 PF02464 Competence-damaged protein D0784_10110 PF00994 Probable molybdopterin binding domain D0784_10125 PF01797 Transposase IS200 like D0784_10130 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D0784_10135 PF03435 Saccharopine dehydrogenase NADP binding domain D0784_10135 PF16653 Saccharopine dehydrogenase C-terminal domain D0784_10140 PF00202 Aminotransferase class-III D0784_10165 PF01066 CDP-alcohol phosphatidyltransferase D0784_10170 PF01541 GIY-YIG catalytic domain D0784_10170 PF02151 UvrB/uvrC motif D0784_10170 PF08459 UvrC Helix-hairpin-helix N-terminal D0784_10175 PF00072 Response regulator receiver domain D0784_10175 PF00196 Bacterial regulatory proteins, luxR family D0784_10180 PF00136 DNA polymerase family B D0784_10180 PF03104 DNA polymerase family B, exonuclease domain D0784_10190 PF01132 Elongation factor P (EF-P) OB domain D0784_10190 PF08207 Elongation factor P (EF-P) KOW-like domain D0784_10190 PF09285 Elongation factor P, C-terminal D0784_10195 PF04269 Protein of unknown function, DUF440 D0784_10200 PF01479 S4 domain D0784_10200 PF00849 RNA pseudouridylate synthase D0784_10210 PF01300 Telomere recombination D0784_10215 PF02811 PHP domain D0784_10220 PF08056 Tryptophan operon leader peptide D0784_10225 PF00425 chorismate binding enzyme D0784_10225 PF04715 Anthranilate synthase component I, N terminal region D0784_10230 PF00117 Glutamine amidotransferase class-I D0784_10235 PF02885 Glycosyl transferase family, helical bundle domain D0784_10235 PF00591 Glycosyl transferase family, a/b domain D0784_10240 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase D0784_10240 PF00218 Indole-3-glycerol phosphate synthase D0784_10245 PF00291 Pyridoxal-phosphate dependent enzyme D0784_10250 PF00290 Tryptophan synthase alpha chain D0784_10255 PF00375 Sodium:dicarboxylate symporter family D0784_10260 PF17327 Acyl homoserine lactone synthase D0784_10265 PF00072 Response regulator receiver domain D0784_10265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_10275 PF04279 Intracellular septation protein A D0784_10280 PF03061 Thioesterase superfamily D0784_10285 PF03795 YCII-related domain D0784_10295 PF01717 Cobalamin-independent synthase, Catalytic domain D0784_10295 PF08267 Cobalamin-independent synthase, N-terminal domain D0784_10300 PF03466 LysR substrate binding domain D0784_10300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_10315 PF00563 EAL domain D0784_10315 PF00498 FHA domain D0784_10315 PF00990 Diguanylate cyclase, GGDEF domain D0784_10320 PF08497 Radical SAM N-terminal D0784_10320 PF04055 Radical SAM superfamily D0784_10320 PF11842 Domain of unknown function (DUF3362) D0784_10345 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0784_10345 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D0784_10350 PF00375 Sodium:dicarboxylate symporter family D0784_10355 PF01042 Endoribonuclease L-PSP D0784_10360 PF13309 HTH domain D0784_10360 PF08348 YheO-like PAS domain D0784_10365 PF02668 Taurine catabolism dioxygenase TauD, TfdA family D0784_10370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0784_10370 PF00672 HAMP domain D0784_10380 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase D0784_10385 PF00535 Glycosyl transferase family 2 D0784_10390 PF00486 Transcriptional regulatory protein, C terminal D0784_10390 PF00072 Response regulator receiver domain D0784_10395 PF00672 HAMP domain D0784_10395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_10395 PF00512 His Kinase A (phospho-acceptor) domain D0784_10430 PF03466 LysR substrate binding domain D0784_10430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_10435 PF00529 HlyD membrane-fusion protein of T1SS D0784_10435 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0784_10450 PF01717 Cobalamin-independent synthase, Catalytic domain D0784_10450 PF08267 Cobalamin-independent synthase, N-terminal domain D0784_10485 PF07733 Bacterial DNA polymerase III alpha NTPase domain D0784_10485 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D0784_10485 PF14579 Helix-hairpin-helix motif D0784_10485 PF00929 Exonuclease D0784_10485 PF11490 DNA polymerase III polC-type N-terminus II D0784_10485 PF02811 PHP domain D0784_10495 PF03543 Yersinia/Haemophilus virulence surface antigen D0784_10500 PF00005 ABC transporter D0784_10500 PF12704 MacB-like periplasmic core domain D0784_10500 PF02687 FtsX-like permease family D0784_10505 PF12704 MacB-like periplasmic core domain D0784_10505 PF00005 ABC transporter D0784_10505 PF02687 FtsX-like permease family D0784_10510 PF12704 MacB-like periplasmic core domain D0784_10510 PF02687 FtsX-like permease family D0784_10510 PF00005 ABC transporter D0784_10520 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0784_10555 PF05958 tRNA (Uracil-5-)-methyltransferase D0784_10555 PF01938 TRAM domain D0784_10565 PF00085 Thioredoxin D0784_10570 PF02683 Cytochrome C biogenesis protein transmembrane region D0784_10570 PF11412 Disulphide bond corrector protein DsbC D0784_10580 PF03466 LysR substrate binding domain D0784_10580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_10590 PF16874 Glycosyl hydrolase family 36 C-terminal domain D0784_10590 PF16875 Glycosyl hydrolase family 36 N-terminal domain D0784_10600 PF02264 LamB porin D0784_10610 PF02929 Beta galactosidase small chain D0784_10610 PF02836 Glycosyl hydrolases family 2, TIM barrel domain D0784_10610 PF00703 Glycosyl hydrolases family 2 D0784_10610 PF02837 Glycosyl hydrolases family 2, sugar binding domain D0784_10610 PF16353 Domain of unknown function(DUF4981) D0784_10615 PF00356 Bacterial regulatory proteins, lacI family D0784_10620 PF04403 Paraquat-inducible protein A D0784_10625 PF02470 MlaD protein D0784_10630 PF03886 ABC-type transport auxiliary lipoprotein component D0784_10650 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0784_10655 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D0784_10660 PF18073 Rubredoxin metal binding domain D0784_10665 PF06305 Lipopolysaccharide assembly protein A domain D0784_10670 PF00216 Bacterial DNA-binding protein D0784_10675 PF00575 S1 RNA binding domain D0784_10680 PF02224 Cytidylate kinase D0784_10685 PF08496 Peptidase family S49 N-terminal D0784_10685 PF01343 Peptidase family S49 D0784_10690 PF00106 short chain dehydrogenase D0784_10705 PF02811 PHP domain D0784_10705 PF07733 Bacterial DNA polymerase III alpha NTPase domain D0784_10705 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D0784_10705 PF01336 OB-fold nucleic acid binding domain D0784_10705 PF14579 Helix-hairpin-helix motif D0784_10710 PF01584 CheW-like domain D0784_10710 PF00072 Response regulator receiver domain D0784_10715 PF00480 ROK family D0784_10720 PF00224 Pyruvate kinase, barrel domain D0784_10720 PF02887 Pyruvate kinase, alpha/beta domain D0784_10730 PF00486 Transcriptional regulatory protein, C terminal D0784_10730 PF18500 CadC C-terminal domain 1 D0784_10740 PF00135 Carboxylesterase family D0784_10760 PF07979 Intimin C-type lectin domain D0784_10760 PF02369 Bacterial Ig-like domain (group 1) D0784_10760 PF11924 Inverse autotransporter, beta-domain D0784_10760 PF09134 Invasin, domain 3 D0784_10765 PF01734 Patatin-like phospholipase D0784_10780 PF00209 Sodium:neurotransmitter symporter family D0784_10795 PF00367 phosphotransferase system, EIIB D0784_10795 PF02378 Phosphotransferase system, EIIC D0784_10800 PF01026 TatD related DNase D0784_10805 PF09115 DNA polymerase III, delta subunit, C terminal D0784_10810 PF02223 Thymidylate kinase D0784_10815 PF02618 YceG-like family D0784_10820 PF01063 Amino-transferase class IV D0784_10825 PF02801 Beta-ketoacyl synthase, C-terminal domain D0784_10825 PF00109 Beta-ketoacyl synthase, N-terminal domain D0784_10830 PF00550 Phosphopantetheine attachment site D0784_10840 PF00698 Acyl transferase domain D0784_10845 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D0784_10845 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D0784_10850 PF02504 Fatty acid synthesis protein D0784_10855 PF01783 Ribosomal L32p protein family D0784_10860 PF02620 Large ribosomal RNA subunit accumulation protein YceD D0784_10865 PF02545 Maf-like protein D0784_10870 PF00849 RNA pseudouridylate synthase D0784_10870 PF01479 S4 domain D0784_10875 PF10150 Ribonuclease E/G family D0784_10875 PF00575 S1 RNA binding domain D0784_10875 PF12111 Polyribonucleotide phosphorylase C terminal D0784_10885 PF01740 STAS domain D0784_10885 PF00916 Sulfate permease family D0784_10890 PF01451 Low molecular weight phosphotyrosine protein phosphatase D0784_10895 PF12557 Cob(I)alamin adenosyltransferase N terminal D0784_10895 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP D0784_10905 PF00485 Phosphoribulokinase / Uridine kinase family D0784_10910 PF10609 NUBPL iron-transfer P-loop NTPase D0784_10915 PF01588 Putative tRNA binding domain D0784_10915 PF09334 tRNA synthetases class I (M) D0784_10925 PF00392 Bacterial regulatory proteins, gntR family D0784_10925 PF07840 FadR C-terminal domain D0784_10930 PF06450 Bacterial Na+/H+ antiporter B (NhaB) D0784_10935 PF02600 Disulfide bond formation protein DsbB D0784_10940 PF02810 SEC-C motif D0784_10940 PF07517 SecA DEAD-like domain D0784_10940 PF01043 SecA preprotein cross-linking domain D0784_10940 PF07516 SecA Wing and Scaffold domain D0784_10945 PF01207 Dihydrouridine synthase (Dus) D0784_10950 PF00990 Diguanylate cyclase, GGDEF domain D0784_10950 PF00072 Response regulator receiver domain D0784_10955 PF00128 Alpha amylase, catalytic domain D0784_10955 PF02903 Alpha amylase, N-terminal ig-like domain D0784_10960 PF00005 ABC transporter D0784_10965 PF02653 Branched-chain amino acid transport system / permease component D0784_10975 PF04217 Protein of unknown function, DUF412 D0784_10980 PF00871 Acetokinase family D0784_10985 PF01515 Phosphate acetyl/butaryl transferase D0784_10985 PF07085 DRTGG domain D0784_10990 PF13194 Domain of unknown function (DUF4010) D0784_10995 PF13409 Glutathione S-transferase, N-terminal domain D0784_11000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0784_11000 PF00005 ABC transporter D0784_11005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0784_11005 PF00005 ABC transporter D0784_11010 PF00528 Binding-protein-dependent transport system inner membrane component D0784_11010 PF12911 N-terminal TM domain of oligopeptide transport permease C D0784_11015 PF00528 Binding-protein-dependent transport system inner membrane component D0784_11020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0784_11025 PF02391 MoaE protein D0784_11030 PF02597 ThiS family D0784_11035 PF01967 MoaC family D0784_11040 PF00994 Probable molybdopterin binding domain D0784_11045 PF06463 Molybdenum Cofactor Synthesis C D0784_11045 PF04055 Radical SAM superfamily D0784_11050 PF01933 Uncharacterised protein family UPF0052 D0784_11055 PF01627 Hpt domain D0784_11060 PF02954 Bacterial regulatory protein, Fis family D0784_11060 PF00072 Response regulator receiver domain D0784_11060 PF00158 Sigma-54 interaction domain D0784_11065 PF00271 Helicase conserved C-terminal domain D0784_11065 PF12344 Ultra-violet resistance protein B D0784_11065 PF02151 UvrB/uvrC motif D0784_11065 PF17757 UvrB interaction domain D0784_11065 PF04851 Type III restriction enzyme, res subunit D0784_11090 PF03372 Endonuclease/Exonuclease/phosphatase family D0784_11100 PF00072 Response regulator receiver domain D0784_11100 PF00486 Transcriptional regulatory protein, C terminal D0784_11105 PF02901 Pyruvate formate lyase-like D0784_11105 PF01228 Glycine radical D0784_11110 PF02508 Rnf-Nqr subunit, membrane protein D0784_11115 PF04060 Putative Fe-S cluster D0784_11120 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D0784_11120 PF12838 4Fe-4S dicluster domain D0784_11120 PF13375 RnfC Barrel sandwich hybrid domain D0784_11120 PF10531 SLBB domain D0784_11125 PF03116 NQR2, RnfD, RnfE family D0784_11130 PF04205 FMN-binding domain D0784_11135 PF02508 Rnf-Nqr subunit, membrane protein D0784_11140 PF00730 HhH-GPD superfamily base excision DNA repair protein D0784_11140 PF00633 Helix-hairpin-helix motif D0784_11140 PF10576 Iron-sulfur binding domain of endonuclease III D0784_11145 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0784_11150 PF10952 Protein of unknown function (DUF2753) D0784_11155 PF18393 MotY N-terminal domain D0784_11155 PF00691 OmpA family D0784_11160 PF00929 Exonuclease D0784_11165 PF13726 Na+-H+ antiporter family D0784_11165 PF03553 Na+/H+ antiporter family D0784_11215 PF01389 OmpA-like transmembrane domain D0784_11215 PF00691 OmpA family D0784_11225 PF01389 OmpA-like transmembrane domain D0784_11225 PF00691 OmpA family D0784_11280 PF00145 C-5 cytosine-specific DNA methylase D0784_11285 PF02899 Phage integrase, N-terminal SAM-like domain D0784_11285 PF00589 Phage integrase family D0784_11290 PF00462 Glutaredoxin D0784_11295 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D0784_11295 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D0784_11310 PF00171 Aldehyde dehydrogenase family D0784_11310 PF00465 Iron-containing alcohol dehydrogenase D0784_11315 PF01914 MarC family integral membrane protein D0784_11320 PF00520 Ion transport protein D0784_11320 PF00027 Cyclic nucleotide-binding domain D0784_11330 PF07963 Prokaryotic N-terminal methylation motif D0784_11330 PF00114 Pilin (bacterial filament) D0784_11335 PF02774 Semialdehyde dehydrogenase, dimerisation domain D0784_11335 PF01118 Semialdehyde dehydrogenase, NAD binding domain D0784_11340 PF03553 Na+/H+ antiporter family D0784_11355 PF04245 37-kD nucleoid-associated bacterial protein D0784_11360 PF07208 Protein of unknown function (DUF1414) D0784_11365 PF00884 Sulfatase D0784_11365 PF11893 Domain of unknown function (DUF3413) D0784_11380 PF05987 Bacterial protein of unknown function (DUF898) D0784_11390 PF00850 Histone deacetylase domain D0784_11395 PF00106 short chain dehydrogenase D0784_11405 PF01131 DNA topoisomerase D0784_11405 PF01751 Toprim domain D0784_11410 PF00881 Nitroreductase family D0784_11415 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0784_11415 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D0784_11420 PF01343 Peptidase family S49 D0784_11425 PF00710 Asparaginase, N-terminal D0784_11425 PF17763 Glutaminase/Asparaginase C-terminal domain D0784_11430 PF07023 Protein of unknown function (DUF1315) D0784_11440 PF01641 SelR domain D0784_11445 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D0784_11445 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D0784_11450 PF01263 Aldose 1-epimerase D0784_11460 PF01156 Inosine-uridine preferring nucleoside hydrolase D0784_11465 PF13847 Methyltransferase domain D0784_11480 PF02028 BCCT, betaine/carnitine/choline family transporter D0784_11485 PF00245 Alkaline phosphatase D0784_11495 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0784_11505 PF05552 Conserved TM helix D0784_11505 PF00924 Mechanosensitive ion channel D0784_11510 PF00282 Pyridoxal-dependent decarboxylase conserved domain D0784_11515 PF06826 Predicted Permease Membrane Region D0784_11520 PF04226 Transglycosylase associated protein D0784_11525 PF03692 Putative zinc- or iron-chelating domain D0784_11530 PF03692 Putative zinc- or iron-chelating domain D0784_11535 PF13309 HTH domain D0784_11535 PF08348 YheO-like PAS domain D0784_11540 PF03313 Serine dehydratase alpha chain D0784_11545 PF01042 Endoribonuclease L-PSP D0784_11555 PF00230 Major intrinsic protein D0784_11560 PF02132 RecR protein D0784_11560 PF13662 Toprim domain D0784_11565 PF02575 YbaB/EbfC DNA-binding family D0784_11570 PF12170 DNA polymerase III tau subunit V interacting with alpha D0784_11570 PF12169 DNA polymerase III subunits gamma and tau domain III D0784_11575 PF00156 Phosphoribosyl transferase domain D0784_11580 PF04304 Protein of unknown function (DUF454) D0784_11590 PF00072 Response regulator receiver domain D0784_11595 PF03466 LysR substrate binding domain D0784_11595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_11600 PF01609 Transposase DDE domain D0784_11600 PF13006 Insertion element 4 transposase N-terminal D0784_11605 PF00156 Phosphoribosyl transferase domain D0784_11610 PF02674 Colicin V production protein D0784_11615 PF05036 Sporulation related domain D0784_11620 PF02875 Mur ligase family, glutamate ligase domain D0784_11620 PF08245 Mur ligase middle domain D0784_11625 PF01039 Carboxyl transferase domain D0784_11625 PF17848 Acetyl-coA carboxylase zinc finger domain D0784_11635 PF01416 tRNA pseudouridine synthase D0784_11645 PF02774 Semialdehyde dehydrogenase, dimerisation domain D0784_11645 PF01118 Semialdehyde dehydrogenase, NAD binding domain D0784_11650 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D0784_11650 PF11890 Domain of unknown function (DUF3410) D0784_11650 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D0784_11660 PF00109 Beta-ketoacyl synthase, N-terminal domain D0784_11660 PF02801 Beta-ketoacyl synthase, C-terminal domain D0784_11665 PF05430 S-adenosyl-L-methionine-dependent methyltransferase D0784_11665 PF01266 FAD dependent oxidoreductase D0784_11680 PF08891 YfcL protein D0784_11685 PF04315 Elongation factor P hydroxylase D0784_11690 PF03458 UPF0126 domain D0784_11695 PF01264 Chorismate synthase D0784_11700 PF05175 Methyltransferase small domain D0784_11705 PF01713 Smr domain D0784_11710 PF00300 Histidine phosphatase superfamily (branch 1) D0784_11715 PF00675 Insulinase (Peptidase family M16) D0784_11715 PF16187 Middle or third domain of peptidase_M16 D0784_11715 PF05193 Peptidase M16 inactive domain D0784_11725 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D0784_11725 PF00378 Enoyl-CoA hydratase/isomerase D0784_11725 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D0784_11730 PF00108 Thiolase, N-terminal domain D0784_11730 PF02803 Thiolase, C-terminal domain D0784_11740 PF04542 Sigma-70 region 2 D0784_11740 PF08281 Sigma-70, region 4 D0784_11750 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D0784_11755 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D0784_11760 PF04333 MlaA lipoprotein D0784_11765 PF03918 Cytochrome C biogenesis protein D0784_11770 PF03918 Cytochrome C biogenesis protein D0784_11775 PF08534 Redoxin D0784_11780 PF01578 Cytochrome C assembly protein D0784_11780 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal D0784_11785 PF03100 CcmE D0784_11795 PF01578 Cytochrome C assembly protein D0784_11800 PF03379 CcmB protein D0784_11805 PF00005 ABC transporter D0784_11815 PF01584 CheW-like domain D0784_11825 PF13614 AAA domain D0784_11830 PF01339 CheB methylesterase D0784_11830 PF00072 Response regulator receiver domain D0784_11835 PF01627 Hpt domain D0784_11835 PF02895 Signal transducing histidine kinase, homodimeric domain D0784_11835 PF01584 CheW-like domain D0784_11835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_11835 PF07194 P2 response regulator binding domain D0784_11840 PF04344 Chemotaxis phosphatase, CheZ D0784_11845 PF00072 Response regulator receiver domain D0784_11850 PF04545 Sigma-70, region 4 D0784_11850 PF04539 Sigma-70 region 3 D0784_11850 PF04542 Sigma-70 region 2 D0784_11855 PF10609 NUBPL iron-transfer P-loop NTPase D0784_11860 PF00448 SRP54-type protein, GTPase domain D0784_11865 PF00771 FHIPEP family D0784_11870 PF01312 FlhB HrpN YscU SpaS Family D0784_11875 PF01311 Bacterial export proteins, family 1 D0784_11880 PF01313 Bacterial export proteins, family 3 D0784_11885 PF00813 FliP family D0784_11890 PF04347 Flagellar biosynthesis protein, FliO D0784_11895 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D0784_11900 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D0784_11900 PF02154 Flagellar motor switch protein FliM D0784_11925 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D0784_11925 PF18269 T3SS EscN ATPase C-terminal domain D0784_11935 PF14841 FliG middle domain D0784_11935 PF14842 FliG N-terminal domain D0784_11935 PF01706 FliG C-terminal domain D0784_11940 PF01514 Secretory protein of YscJ/FliF family D0784_11940 PF08345 Flagellar M-ring protein C-terminal D0784_11945 PF02049 Flagellar hook-basal body complex protein FliE D0784_11950 PF00158 Sigma-54 interaction domain D0784_11950 PF02954 Bacterial regulatory protein, Fis family D0784_11950 PF00072 Response regulator receiver domain D0784_11955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_11955 PF00512 His Kinase A (phospho-acceptor) domain D0784_11960 PF00158 Sigma-54 interaction domain D0784_11960 PF02954 Bacterial regulatory protein, Fis family D0784_11960 PF00072 Response regulator receiver domain D0784_11965 PF02561 Flagellar protein FliS D0784_11975 PF07196 Flagellin hook IN motif D0784_11975 PF02465 Flagellar hook-associated protein 2 N-terminus D0784_11975 PF07195 Flagellar hook-associated protein 2 C-terminus D0784_11980 PF03646 FlaG protein D0784_11985 PF00669 Bacterial flagellin N-terminal helical region D0784_11985 PF07196 Flagellin hook IN motif D0784_11985 PF00700 Bacterial flagellin C-terminal helical region D0784_11990 PF00669 Bacterial flagellin N-terminal helical region D0784_11990 PF07196 Flagellin hook IN motif D0784_11990 PF00700 Bacterial flagellin C-terminal helical region D0784_12000 PF00669 Bacterial flagellin N-terminal helical region D0784_12000 PF00700 Bacterial flagellin C-terminal helical region D0784_12000 PF07196 Flagellin hook IN motif D0784_12015 PF02056 Family 4 glycosyl hydrolase D0784_12015 PF11975 Family 4 glycosyl hydrolase C-terminal domain D0784_12020 PF12833 Helix-turn-helix domain D0784_12025 PF04261 Dyp-type peroxidase family D0784_12030 PF11143 Protein of unknown function (DUF2919) D0784_12050 PF03960 ArsC family D0784_12055 PF01546 Peptidase family M20/M25/M40 D0784_12055 PF07687 Peptidase dimerisation domain D0784_12075 PF00701 Dihydrodipicolinate synthetase family D0784_12080 PF01842 ACT domain D0784_12085 PF00578 AhpC/TSA family D0784_12090 PF01594 AI-2E family transporter D0784_12100 PF13181 Tetratricopeptide repeat D0784_12100 PF01435 Peptidase family M48 D0784_12105 PF03960 ArsC family D0784_12110 PF03358 NADPH-dependent FMN reductase D0784_12125 PF00860 Permease family D0784_12135 PF00586 AIR synthase related protein, N-terminal domain D0784_12135 PF02769 AIR synthase related protein, C-terminal domain D0784_12140 PF00551 Formyl transferase D0784_12145 PF13230 Glutamine amidotransferases class-II D0784_12150 PF13580 SIS domain D0784_12155 PF09317 Domain of unknown function (DUF1974) D0784_12155 PF02770 Acyl-CoA dehydrogenase, middle domain D0784_12155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D0784_12155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D0784_12185 PF00929 Exonuclease D0784_12190 PF00075 RNase H D0784_12195 PF08241 Methyltransferase domain D0784_12200 PF16123 Hydroxyacylglutathione hydrolase C-terminus D0784_12205 PF01476 LysM domain D0784_12205 PF01464 Transglycosylase SLT domain D0784_12220 PF00543 Nitrogen regulatory protein P-II D0784_12225 PF00034 Cytochrome c D0784_12230 PF11734 TilS substrate C-terminal domain D0784_12230 PF09179 TilS substrate binding domain D0784_12230 PF01171 PP-loop family D0784_12235 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit D0784_12240 PF07733 Bacterial DNA polymerase III alpha NTPase domain D0784_12240 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D0784_12240 PF14579 Helix-hairpin-helix motif D0784_12240 PF02811 PHP domain D0784_12240 PF01336 OB-fold nucleic acid binding domain D0784_12245 PF01351 Ribonuclease HII D0784_12250 PF02684 Lipid-A-disaccharide synthetase D0784_12255 PF00132 Bacterial transferase hexapeptide (six repeats) D0784_12255 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 D0784_12260 PF07977 FabA-like domain D0784_12265 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD D0784_12265 PF00132 Bacterial transferase hexapeptide (six repeats) D0784_12270 PF03938 Outer membrane protein (OmpH-like) D0784_12275 PF07244 Surface antigen variable number repeat D0784_12275 PF01103 Surface antigen D0784_12280 PF02163 Peptidase family M50 D0784_12280 PF17820 PDZ domain D0784_12285 PF13288 DXP reductoisomerase C-terminal domain D0784_12285 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain D0784_12285 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase D0784_12295 PF01255 Putative undecaprenyl diphosphate synthase D0784_12300 PF01765 Ribosome recycling factor D0784_12305 PF00696 Amino acid kinase family D0784_12310 PF00889 Elongation factor TS D0784_12315 PF00318 Ribosomal protein S2 D0784_12320 PF00557 Metallopeptidase family M24 D0784_12325 PF01909 Nucleotidyltransferase domain D0784_12325 PF08335 GlnD PII-uridylyltransferase D0784_12325 PF01842 ACT domain D0784_12325 PF01966 HD domain D0784_12330 PF11944 Protein of unknown function (DUF3461) D0784_12335 PF00849 RNA pseudouridylate synthase D0784_12340 PF04287 tRNA pseudouridine synthase C D0784_12370 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 D0784_12375 PF03806 AbgT putative transporter family D0784_12380 PF00444 Ribosomal protein L36 D0784_12385 PF01197 Ribosomal protein L31 D0784_12390 PF18389 TrmO C-terminal domain D0784_12390 PF01980 tRNA-methyltransferase O D0784_12395 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D0784_12395 PF03129 Anticodon binding domain D0784_12395 PF04073 Aminoacyl-tRNA editing domain D0784_12405 PF06786 Uncharacterised protein family (UPF0253) D0784_12415 PF00209 Sodium:neurotransmitter symporter family D0784_12420 PF00041 Fibronectin type III domain D0784_12420 PF00704 Glycosyl hydrolases family 18 D0784_12430 PF03449 Transcription elongation factor, N-terminal D0784_12430 PF01272 Transcription elongation factor, GreA/GreB, C-term D0784_12435 PF16124 RecQ zinc-binding D0784_12435 PF09382 RQC domain D0784_12435 PF00570 HRDC domain D0784_12435 PF00270 DEAD/DEAH box helicase D0784_12435 PF00271 Helicase conserved C-terminal domain D0784_12440 PF11799 impB/mucB/samB family C-terminal domain D0784_12440 PF11798 IMS family HHH motif D0784_12440 PF00817 impB/mucB/samB family D0784_12445 PF00990 Diguanylate cyclase, GGDEF domain D0784_12445 PF00072 Response regulator receiver domain D0784_12455 PF02424 ApbE family D0784_12460 PF00970 Oxidoreductase FAD-binding domain D0784_12460 PF00175 Oxidoreductase NAD-binding domain D0784_12460 PF00111 2Fe-2S iron-sulfur cluster binding domain D0784_12465 PF02508 Rnf-Nqr subunit, membrane protein D0784_12470 PF02508 Rnf-Nqr subunit, membrane protein D0784_12475 PF04205 FMN-binding domain D0784_12480 PF03116 NQR2, RnfD, RnfE family D0784_12485 PF11973 NQRA C-terminal domain D0784_12485 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) D0784_12490 PF01722 BolA-like protein D0784_12495 PF05175 Methyltransferase small domain D0784_12505 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D0784_12510 PF07690 Major Facilitator Superfamily D0784_12520 PF04542 Sigma-70 region 2 D0784_12520 PF04545 Sigma-70, region 4 D0784_12540 PF03502 Nucleoside-specific channel-forming protein, Tsx D0784_12545 PF02558 Ketopantoate reductase PanE/ApbA D0784_12545 PF08546 Ketopantoate reductase PanE/ApbA C terminal D0784_12550 PF01965 DJ-1/PfpI family D0784_12555 PF00266 Aminotransferase class-V D0784_12560 PF02657 Fe-S metabolism associated domain D0784_12565 PF00899 ThiF family D0784_12570 PF06725 3D domain D0784_12570 PF03562 MltA specific insert domain D0784_12585 PF00696 Amino acid kinase family D0784_12585 PF00583 Acetyltransferase (GNAT) family D0784_12605 PF13538 UvrD-like helicase C-terminal domain D0784_12610 PF12705 PD-(D/E)XK nuclease superfamily D0784_12610 PF00580 UvrD/REP helicase N-terminal domain D0784_12610 PF13361 UvrD-like helicase C-terminal domain D0784_12615 PF17946 RecC C-terminal domain D0784_12620 PF11893 Domain of unknown function (DUF3413) D0784_12620 PF00884 Sulfatase D0784_12630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_12630 PF03466 LysR substrate binding domain D0784_12635 PF07130 YebG protein D0784_12650 PF14602 Hexapeptide repeat of succinyl-transferase D0784_12650 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle D0784_12665 PF03009 Glycerophosphoryl diester phosphodiesterase family D0784_12670 PF07690 Major Facilitator Superfamily D0784_12680 PF00230 Major intrinsic protein D0784_12685 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D0784_12685 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D0784_12690 PF08220 DeoR-like helix-turn-helix domain D0784_12690 PF00455 DeoR C terminal sensor domain D0784_12695 PF01266 FAD dependent oxidoreductase D0784_12695 PF16901 C-terminal domain of alpha-glycerophosphate oxidase D0784_12700 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain D0784_12700 PF01464 Transglycosylase SLT domain D0784_12715 PF01588 Putative tRNA binding domain D0784_12725 PF00367 phosphotransferase system, EIIB D0784_12725 PF02378 Phosphotransferase system, EIIC D0784_12730 PF00356 Bacterial regulatory proteins, lacI family D0784_12735 PF01263 Aldose 1-epimerase D0784_12740 PF00288 GHMP kinases N terminal domain D0784_12740 PF08544 GHMP kinases C terminal D0784_12740 PF10509 Galactokinase galactose-binding signature D0784_12745 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain D0784_12745 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain D0784_12750 PF16363 GDP-mannose 4,6 dehydratase D0784_12760 PF00905 Penicillin binding protein transpeptidase domain D0784_12760 PF03717 Penicillin-binding Protein dimerisation domain D0784_12765 PF00356 Bacterial regulatory proteins, lacI family D0784_12770 PF16353 Domain of unknown function(DUF4981) D0784_12770 PF02929 Beta galactosidase small chain D0784_12770 PF00703 Glycosyl hydrolases family 2 D0784_12770 PF02837 Glycosyl hydrolases family 2, sugar binding domain D0784_12770 PF02836 Glycosyl hydrolases family 2, TIM barrel domain D0784_12775 PF04074 YhcH/YjgK/YiaL D0784_12780 PF13520 Amino acid permease D0784_12785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_12785 PF03466 LysR substrate binding domain D0784_12815 PF00437 Type II/IV secretion system protein D0784_12845 PF13629 Pilus formation protein N terminal region D0784_12845 PF04972 BON domain D0784_12845 PF00263 Bacterial type II and III secretion system protein D0784_12870 PF02805 Metal binding domain of Ada D0784_12870 PF12833 Helix-turn-helix domain D0784_12875 PF00501 AMP-binding enzyme D0784_12905 PF03764 Elongation factor G, domain IV D0784_12905 PF14492 Elongation Factor G, domain II D0784_12905 PF00679 Elongation factor G C-terminus D0784_12905 PF03144 Elongation factor Tu domain 2 D0784_12905 PF00009 Elongation factor Tu GTP binding domain D0784_12910 PF18073 Rubredoxin metal binding domain D0784_12920 PF18429 Domain of unknown function (DUF5609) D0784_12930 PF01048 Phosphorylase superfamily D0784_12935 PF01676 Metalloenzyme superfamily D0784_12940 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain D0784_12940 PF00591 Glycosyl transferase family, a/b domain D0784_12940 PF02885 Glycosyl transferase family, helical bundle domain D0784_12945 PF01791 DeoC/LacD family aldolase D0784_12950 PF01773 Na+ dependent nucleoside transporter N-terminus D0784_12950 PF07662 Na+ dependent nucleoside transporter C-terminus D0784_12950 PF07670 Nucleoside recognition D0784_12955 PF01026 TatD related DNase D0784_12960 PF03144 Elongation factor Tu domain 2 D0784_12960 PF00009 Elongation factor Tu GTP binding domain D0784_12960 PF16658 Class II release factor RF3, C-terminal domain D0784_12965 PF00990 Diguanylate cyclase, GGDEF domain D0784_12965 PF05230 MASE2 domain D0784_12985 PF13508 Acetyltransferase (GNAT) domain D0784_12995 PF00990 Diguanylate cyclase, GGDEF domain D0784_12995 PF03707 Bacterial signalling protein N terminal repeat D0784_12995 PF00563 EAL domain D0784_13010 PF01554 MatE D0784_13020 PF07719 Tetratricopeptide repeat D0784_13020 PF13181 Tetratricopeptide repeat D0784_13025 PF01138 3' exoribonuclease family, domain 1 D0784_13025 PF00575 S1 RNA binding domain D0784_13025 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain D0784_13025 PF00013 KH domain D0784_13025 PF03725 3' exoribonuclease family, domain 2 D0784_13030 PF00312 Ribosomal protein S15 D0784_13035 PF09157 Pseudouridine synthase II TruB, C-terminal D0784_13035 PF01509 TruB family pseudouridylate synthase (N terminal domain) D0784_13035 PF16198 tRNA pseudouridylate synthase B C-terminal domain D0784_13040 PF02033 Ribosome-binding factor A D0784_13045 PF04760 Translation initiation factor IF-2, N-terminal region D0784_13045 PF00009 Elongation factor Tu GTP binding domain D0784_13045 PF11987 Translation-initiation factor 2 D0784_13045 PF08364 Bacterial translation initiation factor IF-2 associated region D0784_13050 PF13184 NusA-like KH domain D0784_13050 PF00575 S1 RNA binding domain D0784_13050 PF08529 NusA N-terminal domain D0784_13055 PF17384 RimP C-terminal SH3 domain D0784_13055 PF02576 RimP N-terminal domain D0784_13070 PF03840 Preprotein translocase SecG subunit D0784_13080 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D0784_13080 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D0784_13080 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D0784_13080 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D0784_13085 PF00809 Pterin binding enzyme D0784_13090 PF00004 ATPase family associated with various cellular activities (AAA) D0784_13090 PF17862 AAA+ lid domain D0784_13090 PF06480 FtsH Extracellular D0784_13090 PF01434 Peptidase family M41 D0784_13095 PF01728 FtsJ-like methyltransferase D0784_13100 PF01985 CRS1 / YhbY (CRM) domain D0784_13105 PF01272 Transcription elongation factor, GreA/GreB, C-term D0784_13105 PF03449 Transcription elongation factor, N-terminal D0784_13110 PF13609 Gram-negative porin D0784_13115 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family D0784_13125 PF00579 tRNA synthetases class I (W and Y) D0784_13130 PF01551 Peptidase family M23 D0784_13130 PF01476 LysM domain D0784_13130 PF08525 Opacity-associated protein A N-terminal motif D0784_13135 PF00873 AcrB/AcrD/AcrF family D0784_13140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0784_13145 PF01521 Iron-sulphur cluster biosynthesis D0784_13150 PF00202 Aminotransferase class-III D0784_13155 PF01594 AI-2E family transporter D0784_13160 PF08468 Methyltransferase small domain N-terminal D0784_13160 PF05175 Methyltransferase small domain D0784_13170 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0784_13170 PF00512 His Kinase A (phospho-acceptor) domain D0784_13170 PF00072 Response regulator receiver domain D0784_13170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_13175 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0784_13180 PF00528 Binding-protein-dependent transport system inner membrane component D0784_13185 PF12911 N-terminal TM domain of oligopeptide transport permease C D0784_13185 PF00528 Binding-protein-dependent transport system inner membrane component D0784_13190 PF00005 ABC transporter D0784_13190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0784_13195 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0784_13195 PF00005 ABC transporter D0784_13205 PF01869 BadF/BadG/BcrA/BcrD ATPase family D0784_13210 PF02838 Glycosyl hydrolase family 20, domain 2 D0784_13210 PF00728 Glycosyl hydrolase family 20, catalytic domain D0784_13215 PF06165 Glycosyltransferase family 36 D0784_13215 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain D0784_13220 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D0784_13220 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D0784_13220 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D0784_13220 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D0784_13225 PF08402 TOBE domain D0784_13225 PF00005 ABC transporter D0784_13235 PF13416 Bacterial extracellular solute-binding protein D0784_13240 PF00909 Ammonium Transporter Family D0784_13245 PF00543 Nitrogen regulatory protein P-II D0784_13250 PF06062 Uncharacterised protein family (UPF0231) D0784_13255 PF11791 Aconitate B N-terminal domain D0784_13255 PF06434 Aconitate hydratase 2 N-terminus D0784_13255 PF00330 Aconitase family (aconitate hydratase) D0784_13260 PF01734 Patatin-like phospholipase D0784_13265 PF00905 Penicillin binding protein transpeptidase domain D0784_13265 PF14814 Bifunctional transglycosylase second domain D0784_13265 PF00912 Transglycosylase D0784_13270 PF00271 Helicase conserved C-terminal domain D0784_13270 PF08482 ATP-dependent helicase C-terminal D0784_13270 PF00270 DEAD/DEAH box helicase D0784_13270 PF04408 Helicase associated domain (HA2) D0784_13275 PF03749 Sugar fermentation stimulation protein RE domain D0784_13275 PF17746 SfsA N-terminal OB domain D0784_13280 PF01258 Prokaryotic dksA/traR C4-type zinc finger D0784_13285 PF00749 tRNA synthetases class I (E and Q), catalytic domain D0784_13295 PF01743 Poly A polymerase head domain D0784_13295 PF12626 Polymerase A arginine-rich C-terminus D0784_13295 PF12627 Probable RNA and SrmB- binding site of polymerase A D0784_13300 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) D0784_13305 PF02548 Ketopantoate hydroxymethyltransferase D0784_13310 PF02569 Pantoate-beta-alanine ligase D0784_13315 PF03279 Bacterial lipid A biosynthesis acyltransferase D0784_13320 PF01061 ABC-2 type transporter D0784_13325 PF00005 ABC transporter D0784_13330 PF01740 STAS domain D0784_13330 PF00916 Sulfate permease family D0784_13335 PF00484 Carbonic anhydrase D0784_13340 PF00156 Phosphoribosyl transferase domain D0784_13345 PF00440 Bacterial regulatory proteins, tetR family D0784_13355 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D0784_13355 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0784_13360 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D0784_13360 PF00364 Biotin-requiring enzyme D0784_13360 PF02817 e3 binding domain D0784_13365 PF17831 Pyruvate dehydrogenase E1 component middle domain D0784_13365 PF00456 Transketolase, thiamine diphosphate binding domain D0784_13370 PF07729 FCD domain D0784_13370 PF00392 Bacterial regulatory proteins, gntR family D0784_13375 PF01510 N-acetylmuramoyl-L-alanine amidase D0784_13380 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain D0784_13380 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain D0784_13390 PF00114 Pilin (bacterial filament) D0784_13390 PF07963 Prokaryotic N-terminal methylation motif D0784_13395 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain D0784_13395 PF00437 Type II/IV secretion system protein D0784_13400 PF00482 Type II secretion system (T2SS), protein F D0784_13405 PF06750 Bacterial Peptidase A24 N-terminal domain D0784_13405 PF01478 Type IV leader peptidase family D0784_13410 PF01121 Dephospho-CoA kinase D0784_13415 PF07072 Cell division protein D0784_13420 PF03884 DNA gyrase inhibitor YacG D0784_13430 PF01245 Ribosomal protein L19 D0784_13435 PF01746 tRNA (Guanine-1)-methyltransferase D0784_13440 PF05239 PRC-barrel domain D0784_13440 PF01782 RimM N-terminal domain D0784_13445 PF00886 Ribosomal protein S16 D0784_13450 PF02881 SRP54-type protein, helical bundle domain D0784_13450 PF00448 SRP54-type protein, GTPase domain D0784_13450 PF02978 Signal peptide binding domain D0784_13455 PF01578 Cytochrome C assembly protein D0784_13460 PF03471 Transporter associated domain D0784_13460 PF00571 CBS domain D0784_13460 PF01595 Cyclin M transmembrane N-terminal domain D0784_13465 PF02664 S-Ribosylhomocysteinase (LuxS) D0784_13475 PF04262 Glutamate-cysteine ligase D0784_13480 PF05193 Peptidase M16 inactive domain D0784_13480 PF00675 Insulinase (Peptidase family M16) D0784_13485 PF09335 SNARE associated Golgi protein D0784_13495 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit D0784_13500 PF02436 Conserved carboxylase domain D0784_13500 PF00682 HMGL-like D0784_13500 PF00364 Biotin-requiring enzyme D0784_13505 PF04277 Oxaloacetate decarboxylase, gamma chain D0784_13560 PF02599 Global regulator protein family D0784_13565 PF01842 ACT domain D0784_13565 PF13840 ACT domain D0784_13565 PF00696 Amino acid kinase family D0784_13570 PF01411 tRNA synthetases class II (A) D0784_13570 PF02272 DHHA1 domain D0784_13570 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D0784_13575 PF02631 RecX family D0784_13580 PF00154 recA bacterial DNA recombination protein D0784_13585 PF02464 Competence-damaged protein D0784_13595 PF12161 HsdM N-terminal domain D0784_13595 PF02384 N-6 DNA Methylase D0784_13610 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) D0784_13610 PF12008 Type I restriction and modification enzyme - subunit R C terminal D0784_13610 PF18766 SWI2/SNF2 ATPase D0784_13635 PF04717 Type VI secretion system, phage-baseplate injector D0784_13675 PF04002 RadC-like JAB domain D0784_13700 PF13936 Helix-turn-helix domain D0784_13700 PF00665 Integrase core domain D0784_13725 PF13358 DDE superfamily endonuclease D0784_13730 PF00589 Phage integrase family D0784_13730 PF14659 Phage integrase, N-terminal SAM-like domain D0784_13735 PF05188 MutS domain II D0784_13735 PF00488 MutS domain V D0784_13735 PF05190 MutS family domain IV D0784_13735 PF05192 MutS domain III D0784_13735 PF01624 MutS domain I D0784_13740 PF00140 Sigma-70 factor, region 1.2 D0784_13740 PF04545 Sigma-70, region 4 D0784_13740 PF04542 Sigma-70 region 2 D0784_13740 PF04539 Sigma-70 region 3 D0784_13745 PF01476 LysM domain D0784_13745 PF01551 Peptidase family M23 D0784_13755 PF01975 Survival protein SurE D0784_13760 PF01142 tRNA pseudouridine synthase D (TruD) D0784_13765 PF02542 YgbB family D0784_13770 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase D0784_13775 PF04977 Septum formation initiator D0784_13780 PF03952 Enolase, N-terminal domain D0784_13780 PF00113 Enolase, C-terminal TIM barrel domain D0784_13785 PF06418 CTP synthase N-terminus D0784_13785 PF00117 Glutamine amidotransferase class-I D0784_13790 PF03819 MazG nucleotide pyrophosphohydrolase domain D0784_13795 PF02824 TGS domain D0784_13795 PF04607 Region found in RelA / SpoT proteins D0784_13795 PF13291 ACT domain D0784_13800 PF05958 tRNA (Uracil-5-)-methyltransferase D0784_13800 PF01938 TRAM domain D0784_13810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_13810 PF00512 His Kinase A (phospho-acceptor) domain D0784_13810 PF01627 Hpt domain D0784_13810 PF00072 Response regulator receiver domain D0784_13810 PF00672 HAMP domain D0784_13810 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D0784_13815 PF01648 4'-phosphopantetheinyl transferase superfamily D0784_13820 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ D0784_13825 PF02565 Recombination protein O C terminal D0784_13825 PF11967 Recombination protein O N terminal D0784_13830 PF01926 50S ribosome-binding GTPase D0784_13830 PF07650 KH domain D0784_13835 PF00035 Double-stranded RNA binding motif D0784_13835 PF14622 Ribonuclease-III-like D0784_13840 PF10502 Signal peptidase, peptidase S26 D0784_13845 PF00009 Elongation factor Tu GTP binding domain D0784_13845 PF03144 Elongation factor Tu domain 2 D0784_13845 PF00679 Elongation factor G C-terminus D0784_13845 PF06421 GTP-binding protein LepA C-terminus D0784_13855 PF03888 MucB/RseB N-terminal domain D0784_13855 PF17188 MucB/RseB C-terminal domain D0784_13860 PF03873 Anti sigma-E protein RseA, C-terminal domain D0784_13860 PF03872 Anti sigma-E protein RseA, N-terminal domain D0784_13865 PF04542 Sigma-70 region 2 D0784_13865 PF08281 Sigma-70, region 4 D0784_13870 PF00890 FAD binding domain D0784_13870 PF02910 Fumarate reductase flavoprotein C-term D0784_13880 PF03937 Flavinator of succinate dehydrogenase D0784_13900 PF01494 FAD binding domain D0784_13905 PF01494 FAD binding domain D0784_13910 PF03695 Uncharacterised protein family (UPF0149) D0784_13920 PF05164 Cell division protein ZapA D0784_13930 PF01812 5-formyltetrahydrofolate cyclo-ligase family D0784_13935 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) D0784_13940 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D0784_13940 PF01842 ACT domain D0784_13940 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D0784_13945 PF04402 Protein of unknown function (DUF541) D0784_13950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_13950 PF03466 LysR substrate binding domain D0784_13955 PF01810 LysE type translocator D0784_13965 PF05552 Conserved TM helix D0784_13965 PF00924 Mechanosensitive ion channel D0784_13970 PF01116 Fructose-bisphosphate aldolase class-II D0784_13975 PF00162 Phosphoglycerate kinase D0784_13980 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D0784_13980 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D0784_13990 PF00456 Transketolase, thiamine diphosphate binding domain D0784_13990 PF02780 Transketolase, C-terminal domain D0784_13990 PF02779 Transketolase, pyrimidine binding domain D0784_13995 PF00438 S-adenosylmethionine synthetase, N-terminal domain D0784_13995 PF02773 S-adenosylmethionine synthetase, C-terminal domain D0784_13995 PF02772 S-adenosylmethionine synthetase, central domain D0784_14005 PF10263 SprT-like family D0784_14005 PF17283 SprT-like zinc ribbon domain D0784_14010 PF04231 Endonuclease I D0784_14015 PF04452 RNA methyltransferase D0784_14020 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain D0784_14020 PF02951 Prokaryotic glutathione synthetase, N-terminal domain D0784_14025 PF02622 Uncharacterized ACR, COG1678 D0784_14030 PF03652 Holliday junction resolvase D0784_14035 PF00437 Type II/IV secretion system protein D0784_14040 PF00437 Type II/IV secretion system protein D0784_14045 PF01168 Alanine racemase, N-terminal domain D0784_14050 PF03807 NADP oxidoreductase coenzyme F420-dependent D0784_14050 PF14748 Pyrroline-5-carboxylate reductase dimerisation D0784_14055 PF02325 YGGT family D0784_14060 PF02594 Uncharacterised ACR, YggU family COG1872 D0784_14070 PF01725 Ham1 family D0784_14075 PF04055 Radical SAM superfamily D0784_14075 PF06969 HemN C-terminal domain D0784_14080 PF04960 Glutaminase D0784_14085 PF02086 D12 class N6 adenine-specific DNA methyltransferase D0784_14090 PF02390 Putative methyltransferase D0784_14095 PF14815 NUDIX domain D0784_14095 PF00730 HhH-GPD superfamily base excision DNA repair protein D0784_14095 PF00633 Helix-hairpin-helix motif D0784_14100 PF04362 Bacterial Fe(2+) trafficking D0784_14105 PF01464 Transglycosylase SLT domain D0784_14105 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain D0784_14145 PF00672 HAMP domain D0784_14145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0784_14145 PF17200 Single Cache domain 2 D0784_14175 PF00171 Aldehyde dehydrogenase family D0784_14225 PF00072 Response regulator receiver domain D0784_14235 PF04794 YdjC-like protein D0784_14240 PF11975 Family 4 glycosyl hydrolase C-terminal domain D0784_14240 PF02056 Family 4 glycosyl hydrolase D0784_14245 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit D0784_14250 PF02378 Phosphotransferase system, EIIC D0784_14255 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0784_14260 PF01522 Polysaccharide deacetylase D0784_14275 PF00106 short chain dehydrogenase D0784_14285 PF03739 Lipopolysaccharide export system permease LptF/LptG D0784_14290 PF03739 Lipopolysaccharide export system permease LptF/LptG D0784_14295 PF02789 Cytosol aminopeptidase family, N-terminal domain D0784_14295 PF00883 Cytosol aminopeptidase family, catalytic domain D0784_14300 PF04364 DNA polymerase III chi subunit, HolC D0784_14305 PF00133 tRNA synthetases class I (I, L, M and V) D0784_14305 PF10458 Valyl tRNA synthetase tRNA binding arm D0784_14305 PF08264 Anticodon-binding domain of tRNA D0784_14315 PF00583 Acetyltransferase (GNAT) family D0784_14325 PF06877 Regulator of ribonuclease activity B D0784_14335 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D0784_14335 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D0784_14345 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D0784_14345 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D0784_14350 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain D0784_14350 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain D0784_14355 PF01042 Endoribonuclease L-PSP D0784_14360 PF01553 Acyltransferase D0784_14365 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D0784_14370 PF01722 BolA-like protein D0784_14380 PF05494 MlaC protein D0784_14385 PF02470 MlaD protein D0784_14390 PF02405 Permease MlaE D0784_14395 PF00005 ABC transporter D0784_14400 PF01699 Sodium/calcium exchanger protein D0784_14405 PF00571 CBS domain D0784_14405 PF01380 SIS domain D0784_14415 PF03968 OstA-like protein D0784_14420 PF00005 ABC transporter D0784_14420 PF12399 Branched-chain amino acid ATP-binding cassette transporter D0784_14425 PF04552 Sigma-54, DNA binding domain D0784_14425 PF04963 Sigma-54 factor, core binding domain D0784_14425 PF00309 Sigma-54 factor, Activator interacting domain (AID) D0784_14430 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein D0784_14435 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0784_14440 PF03668 P-loop ATPase protein family D0784_14445 PF00381 PTS HPr component phosphorylation site D0784_14450 PF03448 MgtE intracellular N domain D0784_14450 PF01769 Divalent cation transporter D0784_14450 PF00571 CBS domain D0784_14455 PF01523 Putative modulator of DNA gyrase D0784_14460 PF04751 Protein of unknown function (DUF615) D0784_14465 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D0784_14465 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D0784_14470 PF00849 RNA pseudouridylate synthase D0784_14480 PF18337 RapA N-terminal Tudor like domain D0784_14480 PF18339 RapA N-terminal Tudor like domain 1 D0784_14480 PF00176 SNF2 family N-terminal domain D0784_14480 PF12137 RNA polymerase recycling family C-terminal D0784_14480 PF00271 Helicase conserved C-terminal domain D0784_14485 PF13638 PIN domain D0784_14485 PF02562 PhoH-like protein D0784_14490 PF01523 Putative modulator of DNA gyrase D0784_14495 PF00795 Carbon-nitrogen hydrolase D0784_14500 PF13116 Protein of unknown function D0784_14500 PF13502 AsmA-like C-terminal region D0784_14505 PF10150 Ribonuclease E/G family D0784_14505 PF00575 S1 RNA binding domain D0784_14510 PF02545 Maf-like protein D0784_14515 PF04093 rod shape-determining protein MreD D0784_14520 PF04085 rod shape-determining protein MreC D0784_14560 PF07963 Prokaryotic N-terminal methylation motif D0784_14560 PF00114 Pilin (bacterial filament) D0784_14570 PF00482 Type II secretion system (T2SS), protein F D0784_14575 PF00437 Type II/IV secretion system protein D0784_14575 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain D0784_14585 PF13401 AAA domain D0784_14585 PF01471 Putative peptidoglycan binding domain D0784_14590 PF00263 Bacterial type II and III secretion system protein D0784_14590 PF03958 Bacterial type II/III secretion system short domain D0784_14610 PF00990 Diguanylate cyclase, GGDEF domain D0784_14610 PF00563 EAL domain D0784_14610 PF17157 Gammaproteobacterial periplasmic sensor domain D0784_14615 PF00436 Single-strand binding protein family D0784_14620 PF00196 Bacterial regulatory proteins, luxR family D0784_14625 PF00483 Nucleotidyl transferase D0784_14630 PF17760 UvrA interaction domain D0784_14630 PF00005 ABC transporter D0784_14630 PF17755 UvrA DNA-binding domain D0784_14640 PF00266 Aminotransferase class-V D0784_14650 PF01842 ACT domain D0784_14650 PF00696 Amino acid kinase family D0784_14655 PF02574 Homocysteine S-methyltransferase D0784_14655 PF00809 Pterin binding enzyme D0784_14655 PF02965 Vitamin B12 dependent methionine synthase, activation domain D0784_14655 PF02607 B12 binding domain D0784_14655 PF02310 B12 binding domain D0784_14660 PF00999 Sodium/hydrogen exchanger family D0784_14720 PF01507 Phosphoadenosine phosphosulfate reductase family D0784_14725 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D0784_14725 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D0784_14730 PF00667 FAD binding domain D0784_14730 PF00175 Oxidoreductase NAD-binding domain D0784_14730 PF00258 Flavodoxin D0784_14750 PF01207 Dihydrouridine synthase (Dus) D0784_14755 PF01475 Ferric uptake regulator family D0784_14765 PF00342 Phosphoglucose isomerase D0784_14770 PF01894 Uncharacterised protein family UPF0047 D0784_14780 PF01168 Alanine racemase, N-terminal domain D0784_14780 PF00842 Alanine racemase, C-terminal domain D0784_14785 PF03796 DnaB-like helicase C terminal domain D0784_14785 PF00772 DnaB-like helicase N terminal domain D0784_14795 PF03948 Ribosomal protein L9, C-terminal domain D0784_14795 PF01281 Ribosomal protein L9, N-terminal domain D0784_14800 PF01084 Ribosomal protein S18 D0784_14805 PF00436 Single-strand binding protein family D0784_14810 PF01250 Ribosomal protein S6 D0784_14815 PF00834 Ribulose-phosphate 3 epimerase family D0784_14820 PF02086 D12 class N6 adenine-specific DNA methyltransferase D0784_14830 PF01761 3-dehydroquinate synthase D0784_14835 PF01202 Shikimate kinase D0784_14840 PF00263 Bacterial type II and III secretion system protein D0784_14840 PF11741 AMIN domain D0784_14840 PF07660 Secretin and TonB N terminus short domain D0784_14840 PF03958 Bacterial type II/III secretion system short domain D0784_14865 PF00912 Transglycosylase D0784_14865 PF00905 Penicillin binding protein transpeptidase domain D0784_14865 PF17092 Penicillin-binding protein OB-like domain D0784_14870 PF03466 LysR substrate binding domain D0784_14870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_14875 PF08534 Redoxin D0784_14875 PF00462 Glutaredoxin D0784_14880 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D0784_14880 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0784_14895 PF14698 Argininosuccinate lyase C-terminal D0784_14895 PF00206 Lyase D0784_14895 PF00583 Acetyltransferase (GNAT) family D0784_14900 PF00764 Arginosuccinate synthase D0784_14905 PF00696 Amino acid kinase family D0784_14910 PF02774 Semialdehyde dehydrogenase, dimerisation domain D0784_14910 PF01118 Semialdehyde dehydrogenase, NAD binding domain D0784_14915 PF07687 Peptidase dimerisation domain D0784_14915 PF01546 Peptidase family M20/M25/M40 D0784_14920 PF00311 Phosphoenolpyruvate carboxylase D0784_14930 PF02219 Methylenetetrahydrofolate reductase D0784_14935 PF03447 Homoserine dehydrogenase, NAD binding domain D0784_14935 PF00696 Amino acid kinase family D0784_14935 PF00742 Homoserine dehydrogenase D0784_14940 PF01053 Cys/Met metabolism PLP-dependent enzyme D0784_14945 PF01340 Met Apo-repressor, MetJ D0784_14950 PF00390 Malic enzyme, N-terminal domain D0784_14950 PF03949 Malic enzyme, NAD binding domain D0784_14955 PF00210 Ferritin-like domain D0784_14960 PF04324 BFD-like [2Fe-2S] binding domain D0784_14965 PF00009 Elongation factor Tu GTP binding domain D0784_14965 PF03144 Elongation factor Tu domain 2 D0784_14965 PF03143 Elongation factor Tu C-terminal domain D0784_14970 PF00679 Elongation factor G C-terminus D0784_14970 PF03144 Elongation factor Tu domain 2 D0784_14970 PF00009 Elongation factor Tu GTP binding domain D0784_14970 PF03764 Elongation factor G, domain IV D0784_14970 PF14492 Elongation Factor G, domain II D0784_14975 PF00177 Ribosomal protein S7p/S5e D0784_14980 PF00164 Ribosomal protein S12/S23 D0784_14985 PF04077 DsrH like protein D0784_14990 PF02635 DsrE/DsrF-like family D0784_14995 PF02635 DsrE/DsrF-like family D0784_15000 PF13309 HTH domain D0784_15000 PF08348 YheO-like PAS domain D0784_15005 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D0784_15005 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D0784_15015 PF04102 SlyX D0784_15020 PF01112 Asparaginase D0784_15030 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D0784_15040 PF02254 TrkA-N domain D0784_15040 PF00999 Sodium/hydrogen exchanger family D0784_15045 PF02525 Flavodoxin-like fold D0784_15055 PF00005 ABC transporter D0784_15055 PF12848 ABC transporter D0784_15065 PF00561 alpha/beta hydrolase fold D0784_15070 PF06794 Uncharacterised protein family (UPF0270) D0784_15075 PF00485 Phosphoribulokinase / Uridine kinase family D0784_15080 PF13545 Crp-like helix-turn-helix domain D0784_15080 PF00027 Cyclic nucleotide-binding domain D0784_15090 PF00171 Aldehyde dehydrogenase family D0784_15095 PF04958 Arginine N-succinyltransferase beta subunit D0784_15100 PF00202 Aminotransferase class-III D0784_15105 PF00117 Glutamine amidotransferase class-I D0784_15115 PF00579 tRNA synthetases class I (W and Y) D0784_15120 PF13419 Haloacid dehalogenase-like hydrolase D0784_15125 PF08032 RNA 2'-O ribose methyltransferase substrate binding D0784_15125 PF00588 SpoU rRNA Methylase family D0784_15130 PF00773 RNB domain D0784_15130 PF00575 S1 RNA binding domain D0784_15130 PF08206 Ribonuclease B OB domain D0784_15130 PF08461 Ribonuclease R winged-helix domain D0784_15130 PF17876 Cold shock domain D0784_15135 PF02082 Transcriptional regulator D0784_15140 PF00175 Oxidoreductase NAD-binding domain D0784_15140 PF00042 Globin D0784_15140 PF00970 Oxidoreductase FAD-binding domain D0784_15145 PF08238 Sel1 repeat D0784_15155 PF00709 Adenylosuccinate synthetase D0784_15160 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) D0784_15165 PF01145 SPFH domain / Band 7 family D0784_15170 PF01145 SPFH domain / Band 7 family D0784_15170 PF12221 Bacterial membrane protein N terminal D0784_15175 PF01926 50S ribosome-binding GTPase D0784_15175 PF16360 GTP-binding GTPase Middle Region D0784_15175 PF13167 GTP-binding GTPase N-terminal D0784_15180 PF17209 Hfq protein D0784_15190 PF01119 DNA mismatch repair protein, C-terminal domain D0784_15190 PF08676 MutL C terminal dimerisation domain D0784_15195 PF01520 N-acetylmuramoyl-L-alanine amidase D0784_15200 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE D0784_15205 PF08331 Domain of unknown function (DUF1730) D0784_15280 PF00929 Exonuclease D0784_15285 PF03193 RsgA GTPase D0784_15290 PF02666 Phosphatidylserine decarboxylase D0784_15295 PF00939 Sodium:sulfate symporter transmembrane region D0784_15300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0784_15300 PF00672 HAMP domain D0784_15300 PF02743 Cache domain D0784_15310 PF06415 BPG-independent PGAM N-terminus (iPGM_N) D0784_15310 PF01676 Metalloenzyme superfamily D0784_15315 PF00581 Rhodanese-like domain D0784_15320 PF02556 Preprotein translocase subunit SecB D0784_15325 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus D0784_15325 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus D0784_15330 PF06426 Serine acetyltransferase, N-terminal D0784_15330 PF00132 Bacterial transferase hexapeptide (six repeats) D0784_15335 PF01551 Peptidase family M23 D0784_15345 PF08360 QacR-like protein, C-terminal region D0784_15345 PF00440 Bacterial regulatory proteins, tetR family D0784_15355 PF00152 tRNA synthetases class II (D, K and N) D0784_15360 PF00890 FAD binding domain D0784_15360 PF02910 Fumarate reductase flavoprotein C-term D0784_15365 PF13183 4Fe-4S dicluster domain D0784_15365 PF13085 2Fe-2S iron-sulfur cluster binding domain D0784_15370 PF02300 Fumarate reductase subunit C D0784_15375 PF02313 Fumarate reductase subunit D D0784_15390 PF01132 Elongation factor P (EF-P) OB domain D0784_15390 PF09285 Elongation factor P, C-terminal D0784_15390 PF08207 Elongation factor P (EF-P) KOW-like domain D0784_15395 PF04055 Radical SAM superfamily D0784_15400 PF02308 MgtC family D0784_15410 PF00118 TCP-1/cpn60 chaperonin family D0784_15415 PF00166 Chaperonin 10 Kd subunit D0784_15420 PF01554 MatE D0784_15425 PF00365 Phosphofructokinase D0784_15430 PF16916 Dimerisation domain of Zinc Transporter D0784_15430 PF01545 Cation efflux family D0784_15440 PF00072 Response regulator receiver domain D0784_15440 PF00486 Transcriptional regulatory protein, C terminal D0784_15445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_15445 PF16527 Two-component sensor protein CpxA, periplasmic domain D0784_15445 PF00672 HAMP domain D0784_15445 PF00512 His Kinase A (phospho-acceptor) domain D0784_15450 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D0784_15450 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D0784_15455 PF00588 SpoU rRNA Methylase family D0784_15460 PF04186 FxsA cytoplasmic membrane protein D0784_15465 PF00206 Lyase D0784_15465 PF10415 Fumarase C C-terminus D0784_15470 PF03605 Anaerobic c4-dicarboxylate membrane transporter D0784_15475 PF02683 Cytochrome C biogenesis protein transmembrane region D0784_15475 PF11412 Disulphide bond corrector protein DsbC D0784_15480 PF00072 Response regulator receiver domain D0784_15480 PF00196 Bacterial regulatory proteins, luxR family D0784_15485 PF01914 MarC family integral membrane protein D0784_15495 PF00474 Sodium:solute symporter family D0784_15510 PF10415 Fumarase C C-terminus D0784_15510 PF00206 Lyase D0784_15515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_15515 PF00672 HAMP domain D0784_15515 PF00512 His Kinase A (phospho-acceptor) domain D0784_15515 PF01627 Hpt domain D0784_15515 PF00072 Response regulator receiver domain D0784_15520 PF12832 MFS_1 like family D0784_15535 PF00501 AMP-binding enzyme D0784_15535 PF13193 AMP-binding enzyme C-terminal domain D0784_15535 PF16177 Acetyl-coenzyme A synthetase N-terminus D0784_15540 PF01220 Dehydroquinase class II D0784_15545 PF00364 Biotin-requiring enzyme D0784_15550 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D0784_15550 PF00289 Biotin carboxylase, N-terminal domain D0784_15550 PF02785 Biotin carboxylase C-terminal domain D0784_15565 PF01207 Dihydrouridine synthase (Dus) D0784_15570 PF02954 Bacterial regulatory protein, Fis family D0784_15575 PF00990 Diguanylate cyclase, GGDEF domain D0784_15575 PF05230 MASE2 domain D0784_15620 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain D0784_15620 PF01276 Orn/Lys/Arg decarboxylase, major domain D0784_15620 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain D0784_15625 PF13520 Amino acid permease D0784_15635 PF18500 CadC C-terminal domain 1 D0784_15635 PF00486 Transcriptional regulatory protein, C terminal D0784_15640 PF13411 MerR HTH family regulatory protein D0784_15645 PF02142 MGS-like domain D0784_15645 PF01808 AICARFT/IMPCHase bienzyme D0784_15650 PF02844 Phosphoribosylglycinamide synthetase, N domain D0784_15650 PF02843 Phosphoribosylglycinamide synthetase, C domain D0784_15650 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain D0784_15660 PF00216 Bacterial DNA-binding protein D0784_15665 PF01595 Cyclin M transmembrane N-terminal domain D0784_15665 PF00571 CBS domain D0784_15670 PF04222 Protein of unknown function (DUF416) D0784_15675 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D0784_15680 PF03167 Uracil DNA glycosylase superfamily D0784_15685 PF01208 Uroporphyrinogen decarboxylase (URO-D) D0784_15700 PF00293 NUDIX domain D0784_15700 PF09297 NADH pyrophosphatase zinc ribbon domain D0784_15705 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ D0784_15710 PF04983 RNA polymerase Rpb1, domain 3 D0784_15710 PF05000 RNA polymerase Rpb1, domain 4 D0784_15710 PF04997 RNA polymerase Rpb1, domain 1 D0784_15710 PF00623 RNA polymerase Rpb1, domain 2 D0784_15710 PF04998 RNA polymerase Rpb1, domain 5 D0784_15715 PF04563 RNA polymerase beta subunit D0784_15715 PF04560 RNA polymerase Rpb2, domain 7 D0784_15715 PF00562 RNA polymerase Rpb2, domain 6 D0784_15715 PF10385 RNA polymerase beta subunit external 1 domain D0784_15715 PF04565 RNA polymerase Rpb2, domain 3 D0784_15715 PF04561 RNA polymerase Rpb2, domain 2 D0784_15720 PF00542 Ribosomal protein L7/L12 C-terminal domain D0784_15720 PF16320 Ribosomal protein L7/L12 dimerisation domain D0784_15725 PF00466 Ribosomal protein L10 D0784_15730 PF00687 Ribosomal protein L1p/L10e family D0784_15735 PF00298 Ribosomal protein L11, RNA binding domain D0784_15735 PF03946 Ribosomal protein L11, N-terminal domain D0784_15740 PF02357 Transcription termination factor nusG D0784_15740 PF00467 KOW motif D0784_15745 PF00584 SecE/Sec61-gamma subunits of protein translocation complex D0784_15755 PF03143 Elongation factor Tu C-terminal domain D0784_15755 PF03144 Elongation factor Tu domain 2 D0784_15755 PF00009 Elongation factor Tu GTP binding domain D0784_15780 PF00485 Phosphoribulokinase / Uridine kinase family D0784_15785 PF02237 Biotin protein ligase C terminal domain D0784_15785 PF03099 Biotin/lipoate A/B protein ligase family D0784_15785 PF08279 HTH domain D0784_15790 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain D0784_15790 PF01565 FAD binding domain D0784_15800 PF13091 PLD-like domain D0784_15870 PF01177 Asp/Glu/Hydantoin racemase D0784_15880 PF07715 TonB-dependent Receptor Plug Domain D0784_15880 PF00593 TonB dependent receptor D0784_15885 PF05958 tRNA (Uracil-5-)-methyltransferase D0784_15895 PF00440 Bacterial regulatory proteins, tetR family D0784_15900 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0784_15900 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D0784_15905 PF01554 MatE D0784_15915 PF00717 Peptidase S24-like D0784_15915 PF01726 LexA DNA binding domain D0784_15925 PF01553 Acyltransferase D0784_15930 PF01040 UbiA prenyltransferase family D0784_15935 PF04345 Chorismate lyase D0784_15940 PF03748 Flagellar basal body-associated protein FliL D0784_15945 PF01694 Rhomboid family D0784_15945 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease D0784_15950 PF00581 Rhodanese-like domain D0784_15960 PF04545 Sigma-70, region 4 D0784_15960 PF00140 Sigma-70 factor, region 1.2 D0784_15960 PF04542 Sigma-70 region 2 D0784_15965 PF18075 FtsX extracellular domain D0784_15970 PF00005 ABC transporter D0784_15975 PF00448 SRP54-type protein, GTPase domain D0784_15975 PF02881 SRP54-type protein, helical bundle domain D0784_15990 PF01914 MarC family integral membrane protein D0784_16020 PF10694 Protein of unknown function (DUF2500) D0784_16045 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D0784_16045 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D0784_16050 PF01022 Bacterial regulatory protein, arsR family D0784_16055 PF08668 HDOD domain D0784_16055 PF00563 EAL domain D0784_16060 PF01810 LysE type translocator D0784_16065 PF12146 Serine aminopeptidase, S33 D0784_16090 PF08495 FIST N domain D0784_16090 PF10442 FIST C domain D0784_16090 PF00563 EAL domain D0784_16090 PF00990 Diguanylate cyclase, GGDEF domain D0784_16095 PF13419 Haloacid dehalogenase-like hydrolase D0784_16100 PF00589 Phage integrase family D0784_16100 PF02899 Phage integrase, N-terminal SAM-like domain D0784_16110 PF01678 Diaminopimelate epimerase D0784_16115 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D0784_16115 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D0784_16125 PF01491 Frataxin-like domain D0784_16130 PF01295 Adenylate cyclase, class-I D0784_16130 PF12633 Adenylate cyclase NT domain D0784_16135 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain D0784_16135 PF03900 Porphobilinogen deaminase, C-terminal domain D0784_16140 PF02602 Uroporphyrinogen-III synthase HemD D0784_16145 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase D0784_16150 PF07219 HemY protein N-terminus D0784_16190 PF00175 Oxidoreductase NAD-binding domain D0784_16195 PF00111 2Fe-2S iron-sulfur cluster binding domain D0784_16200 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase D0784_16210 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D0784_16210 PF07498 Rho termination factor, N-terminal domain D0784_16210 PF07497 Rho termination factor, RNA-binding domain D0784_16215 PF00085 Thioredoxin D0784_16220 PF00271 Helicase conserved C-terminal domain D0784_16220 PF00270 DEAD/DEAH box helicase D0784_16225 PF02541 Ppx/GppA phosphatase family D0784_16230 PF02592 Putative vitamin uptake transporter D0784_16245 PF09382 RQC domain D0784_16245 PF00570 HRDC domain D0784_16245 PF00271 Helicase conserved C-terminal domain D0784_16245 PF00270 DEAD/DEAH box helicase D0784_16245 PF16124 RecQ zinc-binding D0784_16250 PF00892 EamA-like transporter family D0784_16270 PF01810 LysE type translocator D0784_16285 PF13361 UvrD-like helicase C-terminal domain D0784_16285 PF00580 UvrD/REP helicase N-terminal domain D0784_16295 PF05114 Protein of unknown function (DUF692) D0784_16315 PF07690 Major Facilitator Superfamily D0784_16320 PF03466 LysR substrate binding domain D0784_16320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_16325 PF01321 Creatinase/Prolidase N-terminal domain D0784_16325 PF00557 Metallopeptidase family M24 D0784_16325 PF01321 Creatinase/Prolidase N-terminal domain D0784_16325 PF00557 Metallopeptidase family M24 D0784_16330 PF04055 Radical SAM superfamily D0784_16330 PF06968 Biotin and Thiamin Synthesis associated domain D0784_16335 PF05690 Thiazole biosynthesis protein ThiG D0784_16340 PF02597 ThiS family D0784_16345 PF00899 ThiF family D0784_16350 PF02581 Thiamine monophosphate synthase D0784_16355 PF13667 ThiC-associated domain D0784_16355 PF01964 Radical SAM ThiC family D0784_16360 PF02537 CrcB-like protein, Camphor Resistance (CrcB) D0784_16365 PF07732 Multicopper oxidase D0784_16365 PF07731 Multicopper oxidase D0784_16365 PF00394 Multicopper oxidase D0784_16410 PF00132 Bacterial transferase hexapeptide (six repeats) D0784_16420 PF08501 Shikimate dehydrogenase substrate binding domain D0784_16420 PF01488 Shikimate / quinate 5-dehydrogenase D0784_16420 PF18317 Shikimate 5'-dehydrogenase C-terminal domain D0784_16425 PF01218 Coproporphyrinogen III oxidase D0784_16430 PF01300 Telomere recombination D0784_16435 PF00731 AIR carboxylase D0784_16440 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain D0784_16440 PF02222 ATP-grasp domain D0784_16445 PF01396 Topoisomerase DNA binding C4 zinc finger D0784_16450 PF04361 Protein of unknown function (DUF494) D0784_16455 PF17782 DprA winged helix domain D0784_16455 PF02481 DNA recombination-mediator protein A D0784_16465 PF01327 Polypeptide deformylase D0784_16470 PF00551 Formyl transferase D0784_16470 PF02911 Formyl transferase, C-terminal domain D0784_16475 PF01029 NusB family D0784_16475 PF01189 16S rRNA methyltransferase RsmB/F D0784_16480 PF02254 TrkA-N domain D0784_16480 PF02080 TrkA-C domain D0784_16485 PF02386 Cation transport protein D0784_16495 PF03006 Haemolysin-III related D0784_16500 PF07070 SpoOM protein D0784_16510 PF06288 Protein of unknown function (DUF1040) D0784_16515 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase D0784_16515 PF12801 4Fe-4S binding domain D0784_16515 PF13746 4Fe-4S dicluster domain D0784_16520 PF01636 Phosphotransferase enzyme family D0784_16525 PF01323 DSBA-like thioredoxin domain D0784_16530 PF01553 Acyltransferase D0784_16540 PF17152 Periplasmic sensor domain D0784_16540 PF00990 Diguanylate cyclase, GGDEF domain D0784_16605 PF02796 Helix-turn-helix domain of resolvase D0784_16605 PF00239 Resolvase, N terminal domain D0784_16625 PF00205 Thiamine pyrophosphate enzyme, central domain D0784_16625 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D0784_16625 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D0784_16635 PF01063 Amino-transferase class IV D0784_16640 PF00920 Dehydratase family D0784_16645 PF00291 Pyridoxal-phosphate dependent enzyme D0784_16645 PF00585 C-terminal regulatory domain of Threonine dehydratase D0784_16650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_16650 PF03466 LysR substrate binding domain D0784_16655 PF07690 Major Facilitator Superfamily D0784_16660 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0784_16665 PF00528 Binding-protein-dependent transport system inner membrane component D0784_16670 PF12804 MobA-like NTP transferase domain D0784_16670 PF00132 Bacterial transferase hexapeptide (six repeats) D0784_16675 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain D0784_16675 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain D0784_16680 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D0784_16680 PF02874 ATP synthase alpha/beta family, beta-barrel domain D0784_16685 PF00231 ATP synthase D0784_16690 PF02874 ATP synthase alpha/beta family, beta-barrel domain D0784_16690 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D0784_16690 PF00306 ATP synthase alpha/beta chain, C terminal domain D0784_16695 PF00213 ATP synthase delta (OSCP) subunit D0784_16700 PF00430 ATP synthase B/B' CF(0) D0784_16705 PF00137 ATP synthase subunit C D0784_16710 PF00119 ATP synthase A chain D0784_16715 PF03899 ATP synthase I chain D0784_16720 PF17762 HTH domain found in ParB protein D0784_16720 PF02195 ParB-like nuclease domain D0784_16725 PF13614 AAA domain D0784_16730 PF02527 rRNA small subunit methyltransferase G D0784_16735 PF13932 GidA associated domain D0784_16735 PF01134 Glucose inhibited division protein A D0784_16740 PF00258 Flavodoxin D0784_16745 PF12631 MnmE helical domain D0784_16745 PF01926 50S ribosome-binding GTPase D0784_16745 PF10396 GTP-binding protein TrmE N-terminus D0784_16750 PF14849 YidC periplasmic domain D0784_16750 PF02096 60Kd inner membrane protein D0784_16755 PF01809 Putative membrane protein insertion efficiency factor D0784_16760 PF00825 Ribonuclease P D0784_16765 PF00468 Ribosomal protein L34 D0784_16770 PF00005 ABC transporter D0784_16775 PF00528 Binding-protein-dependent transport system inner membrane component D0784_16780 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0784_16795 PF00132 Bacterial transferase hexapeptide (six repeats) D0784_16800 PF03466 LysR substrate binding domain D0784_16800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_16810 PF00267 Gram-negative porin D0784_16815 PF00367 phosphotransferase system, EIIB D0784_16815 PF02378 Phosphotransferase system, EIIC D0784_16820 PF01380 SIS domain D0784_16825 PF01380 SIS domain D0784_16825 PF01418 Helix-turn-helix domain, rpiR family D0784_16830 PF00246 Zinc carboxypeptidase D0784_16835 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0784_16840 PF03358 NADPH-dependent FMN reductase D0784_16865 PF00664 ABC transporter transmembrane region D0784_16865 PF00005 ABC transporter D0784_16865 PF03412 Peptidase C39 family D0784_16880 PF00529 HlyD membrane-fusion protein of T1SS D0784_16885 PF02954 Bacterial regulatory protein, Fis family D0784_16885 PF00072 Response regulator receiver domain D0784_16885 PF00158 Sigma-54 interaction domain D0784_16890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_16890 PF02743 Cache domain D0784_16890 PF00512 His Kinase A (phospho-acceptor) domain D0784_16895 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region D0784_16895 PF01243 Pyridoxamine 5'-phosphate oxidase D0784_16905 PF12833 Helix-turn-helix domain D0784_16910 PF18327 Proline utilization A proline dehydrogenase N-terminal domain D0784_16910 PF00171 Aldehyde dehydrogenase family D0784_16910 PF14850 DNA-binding domain of Proline dehydrogenase D0784_16910 PF01619 Proline dehydrogenase D0784_16920 PF00474 Sodium:solute symporter family D0784_16965 PF01037 Lrp/AsnC ligand binding domain D0784_16975 PF00005 ABC transporter D0784_16975 PF00664 ABC transporter transmembrane region D0784_17000 PF00933 Glycosyl hydrolase family 3 N terminal domain D0784_17005 PF10688 Bacterial inner membrane protein D0784_17010 PF01081 KDPG and KHG aldolase D0784_17015 PF00294 pfkB family carbohydrate kinase D0784_17020 PF02614 Glucuronate isomerase D0784_17025 PF08125 Mannitol dehydrogenase C-terminal domain D0784_17025 PF01232 Mannitol dehydrogenase Rossmann domain D0784_17030 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D0784_17035 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D0784_17040 PF03480 Bacterial extracellular solute-binding protein, family 7 D0784_17045 PF00392 Bacterial regulatory proteins, gntR family D0784_17045 PF07729 FCD domain D0784_17050 PF03786 D-mannonate dehydratase (UxuA) D0784_17055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_17055 PF03466 LysR substrate binding domain D0784_17070 PF00271 Helicase conserved C-terminal domain D0784_17070 PF00270 DEAD/DEAH box helicase D0784_17075 PF00155 Aminotransferase class I and II D0784_17080 PF03553 Na+/H+ antiporter family D0784_17085 PF00356 Bacterial regulatory proteins, lacI family D0784_17090 PF03473 MOSC domain D0784_17090 PF03475 3-alpha domain D0784_17100 PF12833 Helix-turn-helix domain D0784_17110 PF13404 AsnC-type helix-turn-helix domain D0784_17110 PF01037 Lrp/AsnC ligand binding domain D0784_17115 PF01810 LysE type translocator D0784_17120 PF06445 GyrI-like small molecule binding domain D0784_17130 PF02743 Cache domain D0784_17130 PF00672 HAMP domain D0784_17130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0784_17140 PF00455 DeoR C terminal sensor domain D0784_17140 PF08220 DeoR-like helix-turn-helix domain D0784_17145 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D0784_17145 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D0784_17150 PF17042 Nucleotide-binding C-terminal domain D0784_17150 PF07005 Sugar-binding N-terminal domain D0784_17155 PF00596 Class II Aldolase and Adducin N-terminal domain D0784_17160 PF01261 Xylose isomerase-like TIM barrel D0784_17165 PF02447 GntP family permease D0784_17210 PF13192 Thioredoxin domain D0784_17210 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0784_17215 PF10417 C-terminal domain of 1-Cys peroxiredoxin D0784_17215 PF00578 AhpC/TSA family D0784_17220 PF01047 MarR family D0784_17225 PF02566 OsmC-like protein D0784_17265 PF00005 ABC transporter D0784_17270 PF00857 Isochorismatase family D0784_17285 PF00535 Glycosyl transferase family 2 D0784_17320 PF00672 HAMP domain D0784_17320 PF17200 Single Cache domain 2 D0784_17320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0784_17325 PF00675 Insulinase (Peptidase family M16) D0784_17325 PF05193 Peptidase M16 inactive domain D0784_17350 PF07702 UTRA domain D0784_17350 PF00392 Bacterial regulatory proteins, gntR family D0784_17355 PF13378 Enolase C-terminal domain-like D0784_17355 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D0784_17360 PF02378 Phosphotransferase system, EIIC D0784_17360 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D0784_17360 PF00367 phosphotransferase system, EIIB D0784_17365 PF00294 pfkB family carbohydrate kinase D0784_17370 PF01081 KDPG and KHG aldolase D0784_17385 PF01551 Peptidase family M23 D0784_17385 PF04225 Opacity-associated protein A LysM-like domain D0784_17400 PF07690 Major Facilitator Superfamily D0784_17410 PF00356 Bacterial regulatory proteins, lacI family D0784_17430 PF00474 Sodium:solute symporter family D0784_17435 PF03313 Serine dehydratase alpha chain D0784_17435 PF03315 Serine dehydratase beta chain D0784_17455 PF17179 4Fe-4S dicluster domain D0784_17470 PF00360 Phytochrome region D0784_17470 PF01590 GAF domain D0784_17470 PF00563 EAL domain D0784_17470 PF00990 Diguanylate cyclase, GGDEF domain D0784_17475 PF00128 Alpha amylase, catalytic domain D0784_17475 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D0784_17480 PF02264 LamB porin D0784_17495 PF16657 Maltogenic Amylase, C-terminal domain D0784_17495 PF02903 Alpha amylase, N-terminal ig-like domain D0784_17495 PF00128 Alpha amylase, catalytic domain D0784_17500 PF04231 Endonuclease I D0784_17505 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D0784_17505 PF03714 Bacterial pullanase-associated domain D0784_17505 PF11852 Domain of unknown function (DUF3372) D0784_17505 PF17967 Pullulanase N2 domain D0784_17505 PF18494 Pullulanase Ins domain D0784_17520 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain D0784_17520 PF01276 Orn/Lys/Arg decarboxylase, major domain D0784_17520 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain D0784_17525 PF13520 Amino acid permease D0784_17535 PF08543 Phosphomethylpyrimidine kinase D0784_17545 PF01609 Transposase DDE domain D0784_17545 PF13006 Insertion element 4 transposase N-terminal D0784_17550 PF00375 Sodium:dicarboxylate symporter family D0784_17555 PF03193 RsgA GTPase D0784_17560 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D0784_17560 PF00367 phosphotransferase system, EIIB D0784_17560 PF02378 Phosphotransferase system, EIIC D0784_17570 PF02630 SCO1/SenC D0784_17585 PF00196 Bacterial regulatory proteins, luxR family D0784_17585 PF17874 MalT-like TPR region D0784_17595 PF00343 Carbohydrate phosphorylase D0784_17600 PF02446 4-alpha-glucanotransferase D0784_17605 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D0784_17605 PF02806 Alpha amylase, C-terminal all-beta domain D0784_17605 PF00128 Alpha amylase, catalytic domain D0784_17610 PF00912 Transglycosylase D0784_17615 PF00128 Alpha amylase, catalytic domain D0784_17630 PF07670 Nucleoside recognition D0784_17635 PF07670 Nucleoside recognition D0784_17640 PF01546 Peptidase family M20/M25/M40 D0784_17640 PF07687 Peptidase dimerisation domain D0784_17645 PF06803 Protein of unknown function (DUF1232) D0784_17650 PF00375 Sodium:dicarboxylate symporter family D0784_17690 PF13807 G-rich domain on putative tyrosine kinase D0784_17690 PF13614 AAA domain D0784_17690 PF02706 Chain length determinant protein D0784_17695 PF01451 Low molecular weight phosphotyrosine protein phosphatase D0784_17700 PF18412 Outer-membrane lipoprotein Wza C-terminal domain D0784_17700 PF02563 Polysaccharide biosynthesis/export protein D0784_17700 PF10531 SLBB domain D0784_17705 PF00881 Nitroreductase family D0784_17710 PF01914 MarC family integral membrane protein D0784_17715 PF01734 Patatin-like phospholipase D0784_17725 PF02469 Fasciclin domain D0784_17730 PF00875 DNA photolyase D0784_17730 PF03441 FAD binding domain of DNA photolyase D0784_17750 PF00561 alpha/beta hydrolase fold D0784_17755 PF00768 D-alanyl-D-alanine carboxypeptidase D0784_17755 PF07943 Penicillin-binding protein 5, C-terminal domain D0784_17765 PF03466 LysR substrate binding domain D0784_17765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_17770 PF09905 DNA-binding protein VF530 D0784_17780 PF00970 Oxidoreductase FAD-binding domain D0784_17780 PF00175 Oxidoreductase NAD-binding domain D0784_17795 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) D0784_17800 PF01594 AI-2E family transporter D0784_17810 PF00529 HlyD membrane-fusion protein of T1SS D0784_17810 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0784_17830 PF00892 EamA-like transporter family D0784_17840 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family D0784_17845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_17845 PF03466 LysR substrate binding domain D0784_17850 PF07690 Major Facilitator Superfamily D0784_17860 PF00583 Acetyltransferase (GNAT) family D0784_17870 PF00072 Response regulator receiver domain D0784_17870 PF00486 Transcriptional regulatory protein, C terminal D0784_17875 PF00512 His Kinase A (phospho-acceptor) domain D0784_17875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_17875 PF00672 HAMP domain D0784_17890 PF00923 Transaldolase/Fructose-6-phosphate aldolase D0784_17895 PF04055 Radical SAM superfamily D0784_17915 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D0784_17915 PF01627 Hpt domain D0784_17915 PF00072 Response regulator receiver domain D0784_17915 PF00672 HAMP domain D0784_17915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_17915 PF00512 His Kinase A (phospho-acceptor) domain D0784_17930 PF00293 NUDIX domain D0784_17930 PF13344 Haloacid dehalogenase-like hydrolase D0784_17940 PF01042 Endoribonuclease L-PSP D0784_17950 PF02322 Cytochrome bd terminal oxidase subunit II D0784_17955 PF01654 Cytochrome bd terminal oxidase subunit I D0784_17970 PF05114 Protein of unknown function (DUF692) D0784_17985 PF02567 Phenazine biosynthesis-like protein D0784_17990 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0784_18005 PF00005 ABC transporter D0784_18005 PF12848 ABC transporter D0784_18010 PF09905 DNA-binding protein VF530 D0784_18025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_18025 PF03466 LysR substrate binding domain D0784_18040 PF07971 Glycosyl hydrolase family 92 D0784_18040 PF17678 Glycosyl hydrolase family 92 N-terminal domain D0784_18045 PF17678 Glycosyl hydrolase family 92 N-terminal domain D0784_18045 PF07971 Glycosyl hydrolase family 92 D0784_18055 PF07971 Glycosyl hydrolase family 92 D0784_18055 PF17678 Glycosyl hydrolase family 92 N-terminal domain D0784_18060 PF07971 Glycosyl hydrolase family 92 D0784_18060 PF17678 Glycosyl hydrolase family 92 N-terminal domain D0784_18075 PF01641 SelR domain D0784_18075 PF01625 Peptide methionine sulfoxide reductase D0784_18080 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0784_18085 PF08220 DeoR-like helix-turn-helix domain D0784_18085 PF00455 DeoR C terminal sensor domain D0784_18100 PF00199 Catalase D0784_18100 PF06628 Catalase-related immune-responsive D0784_18110 PF00080 Copper/zinc superoxide dismutase (SODC) D0784_18115 PF00857 Isochorismatase family D0784_18125 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family D0784_18125 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain D0784_18140 PF06942 GlpM protein D0784_18150 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0784_18150 PF01464 Transglycosylase SLT domain D0784_18160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_18160 PF03466 LysR substrate binding domain D0784_18165 PF00582 Universal stress protein family D0784_18170 PF01048 Phosphorylase superfamily D0784_18185 PF00571 CBS domain D0784_18185 PF00005 ABC transporter D0784_18190 PF00528 Binding-protein-dependent transport system inner membrane component D0784_18200 PF02001 Protein of unknown function DUF134 D0784_18220 PF03144 Elongation factor Tu domain 2 D0784_18220 PF00009 Elongation factor Tu GTP binding domain D0784_18220 PF03764 Elongation factor G, domain IV D0784_18220 PF14492 Elongation Factor G, domain II D0784_18220 PF00679 Elongation factor G C-terminus D0784_18230 PF13378 Enolase C-terminal domain-like D0784_18230 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D0784_18240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_18240 PF03466 LysR substrate binding domain D0784_18245 PF09278 MerR, DNA binding D0784_18245 PF00376 MerR family regulatory protein D0784_18270 PF13091 PLD-like domain D0784_18275 PF13533 Biotin-lipoyl like D0784_18280 PF00873 AcrB/AcrD/AcrF family D0784_18295 PF00873 AcrB/AcrD/AcrF family D0784_18315 PF13193 AMP-binding enzyme C-terminal domain D0784_18315 PF00501 AMP-binding enzyme D0784_18320 PF02028 BCCT, betaine/carnitine/choline family transporter D0784_18325 PF00703 Glycosyl hydrolases family 2 D0784_18325 PF02836 Glycosyl hydrolases family 2, TIM barrel domain D0784_18325 PF02837 Glycosyl hydrolases family 2, sugar binding domain D0784_18325 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 D0784_18330 PF00196 Bacterial regulatory proteins, luxR family D0784_18340 PF00563 EAL domain D0784_18340 PF03707 Bacterial signalling protein N terminal repeat D0784_18340 PF00990 Diguanylate cyclase, GGDEF domain D0784_18350 PF03616 Sodium/glutamate symporter D0784_18355 PF02600 Disulfide bond formation protein DsbB D0784_18365 PF02321 Outer membrane efflux protein D0784_18370 PF00873 AcrB/AcrD/AcrF family D0784_18375 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0784_18380 PF03466 LysR substrate binding domain D0784_18380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_18390 PF03466 LysR substrate binding domain D0784_18390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_18415 PF00579 tRNA synthetases class I (W and Y) D0784_18420 PF00196 Bacterial regulatory proteins, luxR family D0784_18420 PF00072 Response regulator receiver domain D0784_18430 PF00391 PEP-utilising enzyme, mobile domain D0784_18430 PF02896 PEP-utilising enzyme, TIM barrel domain D0784_18430 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain D0784_18435 PF03618 Kinase/pyrophosphorylase D0784_18440 PF00710 Asparaginase, N-terminal D0784_18440 PF17763 Glutaminase/Asparaginase C-terminal domain D0784_18445 PF00990 Diguanylate cyclase, GGDEF domain D0784_18445 PF00563 EAL domain D0784_18445 PF03707 Bacterial signalling protein N terminal repeat D0784_18460 PF03466 LysR substrate binding domain D0784_18460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_18470 PF04228 Putative neutral zinc metallopeptidase D0784_18475 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) D0784_18490 PF05496 Holliday junction DNA helicase RuvB P-loop domain D0784_18490 PF05491 RuvB C-terminal winged helix domain D0784_18490 PF17864 RuvB AAA lid domain D0784_18500 PF05816 Toxic anion resistance protein (TelA) D0784_18510 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D0784_18515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_18515 PF03466 LysR substrate binding domain D0784_18530 PF03466 LysR substrate binding domain D0784_18530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_18540 PF04717 Type VI secretion system, phage-baseplate injector D0784_18555 PF03781 Sulfatase-modifying factor enzyme 1 D0784_18555 PF00069 Protein kinase domain D0784_18560 PF00271 Helicase conserved C-terminal domain D0784_18560 PF00270 DEAD/DEAH box helicase D0784_18605 PF00155 Aminotransferase class I and II D0784_18700 PF00528 Binding-protein-dependent transport system inner membrane component D0784_18705 PF00005 ABC transporter D0784_18715 PF00465 Iron-containing alcohol dehydrogenase D0784_18720 PF03466 LysR substrate binding domain D0784_18720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_18725 PF01872 RibD C-terminal domain D0784_18730 PF00440 Bacterial regulatory proteins, tetR family D0784_18730 PF02909 Tetracyclin repressor-like, C-terminal domain D0784_18735 PF02798 Glutathione S-transferase, N-terminal domain D0784_18740 PF02028 BCCT, betaine/carnitine/choline family transporter D0784_18745 PF00768 D-alanyl-D-alanine carboxypeptidase D0784_18745 PF07943 Penicillin-binding protein 5, C-terminal domain D0784_18760 PF00462 Glutaredoxin D0784_18760 PF08534 Redoxin D0784_18775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_18775 PF03466 LysR substrate binding domain D0784_18780 PF00072 Response regulator receiver domain D0784_18780 PF00990 Diguanylate cyclase, GGDEF domain D0784_18785 PF00962 Adenosine/AMP deaminase D0784_18800 PF00313 'Cold-shock' DNA-binding domain D0784_18805 PF05726 Pirin C-terminal cupin domain D0784_18805 PF02678 Pirin D0784_18810 PF01734 Patatin-like phospholipase D0784_18820 PF01979 Amidohydrolase family D0784_18825 PF00132 Bacterial transferase hexapeptide (six repeats) D0784_18830 PF07683 Cobalamin synthesis protein cobW C-terminal domain D0784_18830 PF02492 CobW/HypB/UreG, nucleotide-binding domain D0784_18840 PF01047 MarR family D0784_18855 PF17912 MalK OB fold domain D0784_18855 PF00005 ABC transporter D0784_18860 PF00528 Binding-protein-dependent transport system inner membrane component D0784_18865 PF00528 Binding-protein-dependent transport system inner membrane component D0784_18870 PF13416 Bacterial extracellular solute-binding protein D0784_18875 PF03009 Glycerophosphoryl diester phosphodiesterase family D0784_18880 PF08220 DeoR-like helix-turn-helix domain D0784_18880 PF00455 DeoR C terminal sensor domain D0784_18885 PF00582 Universal stress protein family D0784_18895 PF12848 ABC transporter D0784_18895 PF16326 ABC transporter C-terminal domain D0784_18895 PF00005 ABC transporter D0784_18900 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain D0784_18900 PF00326 Prolyl oligopeptidase family D0784_18905 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D0784_18915 PF13302 Acetyltransferase (GNAT) domain D0784_18925 PF14376 Haem-binding domain D0784_18925 PF00034 Cytochrome c D0784_18925 PF03150 Di-haem cytochrome c peroxidase D0784_18940 PF00293 NUDIX domain D0784_18985 PF00873 AcrB/AcrD/AcrF family D0784_19005 PF12838 4Fe-4S dicluster domain D0784_19005 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D0784_19005 PF00384 Molybdopterin oxidoreductase D0784_19005 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region D0784_19005 PF01568 Molydopterin dinucleotide binding domain D0784_19015 PF01979 Amidohydrolase family D0784_19030 PF00005 ABC transporter D0784_19040 PF00672 HAMP domain D0784_19040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0784_19040 PF17200 Single Cache domain 2 D0784_19045 PF01418 Helix-turn-helix domain, rpiR family D0784_19045 PF01380 SIS domain D0784_19045 PF02685 Glucokinase D0784_19055 PF07969 Amidohydrolase family D0784_19065 PF00474 Sodium:solute symporter family D0784_19070 PF00294 pfkB family carbohydrate kinase D0784_19075 PF01081 KDPG and KHG aldolase D0784_19080 PF00728 Glycosyl hydrolase family 20, catalytic domain D0784_19080 PF02838 Glycosyl hydrolase family 20, domain 2 D0784_19085 PF10282 Lactonase, 7-bladed beta-propeller D0784_19090 PF01042 Endoribonuclease L-PSP D0784_19095 PF01161 Phosphatidylethanolamine-binding protein D0784_19110 PF01758 Sodium Bile acid symporter family D0784_19125 PF01638 HxlR-like helix-turn-helix D0784_19140 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0784_19145 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0784_19145 PF02378 Phosphotransferase system, EIIC D0784_19150 PF00107 Zinc-binding dehydrogenase D0784_19150 PF08240 Alcohol dehydrogenase GroES-like domain D0784_19185 PF03222 Tryptophan/tyrosine permease family D0784_19195 PF00672 HAMP domain D0784_19195 PF02743 Cache domain D0784_19195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0784_19225 PF08525 Opacity-associated protein A N-terminal motif D0784_19225 PF01476 LysM domain D0784_19225 PF01551 Peptidase family M23 D0784_19230 PF08448 PAS fold D0784_19230 PF00563 EAL domain D0784_19230 PF00990 Diguanylate cyclase, GGDEF domain D0784_19230 PF08447 PAS fold D0784_19235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_19235 PF03466 LysR substrate binding domain D0784_19240 PF07690 Major Facilitator Superfamily D0784_19255 PF00462 Glutaredoxin D0784_19260 PF00892 EamA-like transporter family D0784_19275 PF01557 Fumarylacetoacetate (FAA) hydrolase family D0784_19295 PF01810 LysE type translocator D0784_19305 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D0784_19305 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D0784_19305 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D0784_19305 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D0784_19310 PF02790 Cytochrome C oxidase subunit II, transmembrane domain D0784_19310 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D0784_19315 PF00115 Cytochrome C and Quinol oxidase polypeptide I D0784_19320 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 D0784_19325 PF00510 Cytochrome c oxidase subunit III D0784_19345 PF02628 Cytochrome oxidase assembly protein D0784_19350 PF01040 UbiA prenyltransferase family D0784_19355 PF00691 OmpA family D0784_19355 PF01389 OmpA-like transmembrane domain D0784_19360 PF00793 DAHP synthetase I family D0784_19365 PF07690 Major Facilitator Superfamily D0784_19370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0784_19370 PF08447 PAS fold D0784_19375 PF00456 Transketolase, thiamine diphosphate binding domain D0784_19375 PF02780 Transketolase, C-terminal domain D0784_19375 PF02779 Transketolase, pyrimidine binding domain D0784_19380 PF00923 Transaldolase/Fructose-6-phosphate aldolase D0784_19395 PF00704 Glycosyl hydrolases family 18 D0784_19395 PF08329 Chitinase A, N-terminal domain D0784_19400 PF00990 Diguanylate cyclase, GGDEF domain D0784_19400 PF00563 EAL domain D0784_19400 PF03707 Bacterial signalling protein N terminal repeat D0784_19405 PF00581 Rhodanese-like domain D0784_19425 PF05893 Acyl-CoA reductase (LuxC) D0784_19430 PF02273 Acyl transferase D0784_19435 PF00296 Luciferase-like monooxygenase D0784_19440 PF00296 Luciferase-like monooxygenase D0784_19445 PF04443 Acyl-protein synthetase, LuxE D0784_19450 PF00175 Oxidoreductase NAD-binding domain D0784_19455 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D0784_19460 PF00899 ThiF family D0784_19465 PF00994 Probable molybdopterin binding domain D0784_19465 PF03453 MoeA N-terminal region (domain I and II) D0784_19465 PF03454 MoeA C-terminal region (domain IV) D0784_19470 PF01227 GTP cyclohydrolase I D0784_19490 PF00654 Voltage gated chloride channel D0784_19505 PF00248 Aldo/keto reductase family D0784_19510 PF00072 Response regulator receiver domain D0784_19520 PF03853 YjeF-related protein N-terminus D0784_19520 PF01256 Carbohydrate kinase D0784_19525 PF00478 IMP dehydrogenase / GMP reductase domain D0784_19540 PF12146 Serine aminopeptidase, S33 D0784_19545 PF03466 LysR substrate binding domain D0784_19545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_19565 PF04972 BON domain D0784_19565 PF13629 Pilus formation protein N terminal region D0784_19565 PF00263 Bacterial type II and III secretion system protein D0784_19575 PF10609 NUBPL iron-transfer P-loop NTPase D0784_19580 PF00437 Type II/IV secretion system protein D0784_19615 PF00691 OmpA family D0784_19615 PF13488 Glycine zipper D0784_19635 PF00990 Diguanylate cyclase, GGDEF domain D0784_19635 PF07694 5TMR of 5TMR-LYT D0784_19640 PF00440 Bacterial regulatory proteins, tetR family D0784_19640 PF13977 BetI-type transcriptional repressor, C-terminal D0784_19645 PF00171 Aldehyde dehydrogenase family D0784_19650 PF05199 GMC oxidoreductase D0784_19650 PF00732 GMC oxidoreductase D0784_19655 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D0784_19660 PF00528 Binding-protein-dependent transport system inner membrane component D0784_19665 PF00571 CBS domain D0784_19665 PF00005 ABC transporter D0784_19670 PF00881 Nitroreductase family D0784_19675 PF01145 SPFH domain / Band 7 family D0784_19675 PF16200 C-terminal region of band_7 D0784_19690 PF00360 Phytochrome region D0784_19690 PF00990 Diguanylate cyclase, GGDEF domain D0784_19690 PF01590 GAF domain D0784_19690 PF00563 EAL domain D0784_19695 PF00072 Response regulator receiver domain D0784_19695 PF00512 His Kinase A (phospho-acceptor) domain D0784_19695 PF09456 RcsC Alpha-Beta-Loop (ABL) D0784_19695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_19700 PF00034 Cytochrome c D0784_19700 PF03150 Di-haem cytochrome c peroxidase D0784_19705 PF09308 LuxQ, periplasmic D0784_19705 PF00072 Response regulator receiver domain D0784_19705 PF00512 His Kinase A (phospho-acceptor) domain D0784_19705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_19720 PF04116 Fatty acid hydroxylase superfamily D0784_19750 PF09335 SNARE associated Golgi protein D0784_19775 PF01048 Phosphorylase superfamily D0784_19780 PF00563 EAL domain D0784_19780 PF00990 Diguanylate cyclase, GGDEF domain D0784_19785 PF05025 RbsD / FucU transport protein family D0784_19790 PF00005 ABC transporter D0784_19795 PF02653 Branched-chain amino acid transport system / permease component D0784_19800 PF13407 Periplasmic binding protein domain D0784_19805 PF00294 pfkB family carbohydrate kinase D0784_19810 PF00356 Bacterial regulatory proteins, lacI family D0784_19820 PF04973 Nicotinamide mononucleotide transporter D0784_19825 PF01048 Phosphorylase superfamily D0784_19840 PF01497 Periplasmic binding protein D0784_19845 PF01032 FecCD transport family D0784_19850 PF01032 FecCD transport family D0784_19855 PF00005 ABC transporter D0784_19860 PF13411 MerR HTH family regulatory protein D0784_19885 PF12805 FUSC-like inner membrane protein yccS D0784_19890 PF12462 DNA helicase IV / RNA helicase N terminal D0784_19890 PF00580 UvrD/REP helicase N-terminal domain D0784_19890 PF13361 UvrD-like helicase C-terminal domain D0784_19895 PF02142 MGS-like domain D0784_19900 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D0784_19905 PF01627 Hpt domain D0784_19905 PF00512 His Kinase A (phospho-acceptor) domain D0784_19905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_19905 PF00672 HAMP domain D0784_19905 PF00072 Response regulator receiver domain D0784_19925 PF00672 HAMP domain D0784_19925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_19925 PF00512 His Kinase A (phospho-acceptor) domain D0784_19925 PF16750 Sensor domain of 2-component histidine kinase D0784_19930 PF00486 Transcriptional regulatory protein, C terminal D0784_19930 PF00072 Response regulator receiver domain D0784_19935 PF00884 Sulfatase D0784_19940 PF00884 Sulfatase D0784_19950 PF07726 ATPase family associated with various cellular activities (AAA) D0784_19950 PF17863 AAA lid domain D0784_19965 PF00092 von Willebrand factor type A domain D0784_19985 PF00119 ATP synthase A chain D0784_19990 PF00137 ATP synthase subunit C D0784_19995 PF00430 ATP synthase B/B' CF(0) D0784_20000 PF00213 ATP synthase delta (OSCP) subunit D0784_20005 PF02874 ATP synthase alpha/beta family, beta-barrel domain D0784_20005 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D0784_20005 PF00306 ATP synthase alpha/beta chain, C terminal domain D0784_20010 PF00231 ATP synthase D0784_20015 PF02874 ATP synthase alpha/beta family, beta-barrel domain D0784_20015 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D0784_20020 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain D0784_20020 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain D0784_20025 PF01872 RibD C-terminal domain D0784_20025 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D0784_20030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_20030 PF03466 LysR substrate binding domain D0784_20035 PF00781 Diacylglycerol kinase catalytic domain D0784_20040 PF04076 Bacterial OB fold (BOF) protein D0784_20055 PF03781 Sulfatase-modifying factor enzyme 1 D0784_20060 PF04055 Radical SAM superfamily D0784_20060 PF13186 Iron-sulfur cluster-binding domain D0784_20070 PF08774 VRR-NUC domain D0784_20070 PF18081 Fanconi anemia-associated nuclease SAP domain D0784_20085 PF01435 Peptidase family M48 D0784_20090 PF04011 LemA family D0784_20095 PF03606 C4-dicarboxylate anaerobic carrier D0784_20115 PF00072 Response regulator receiver domain D0784_20115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_20120 PF00155 Aminotransferase class I and II D0784_20125 PF01926 50S ribosome-binding GTPase D0784_20130 PF08525 Opacity-associated protein A N-terminal motif D0784_20130 PF01551 Peptidase family M23 D0784_20130 PF01476 LysM domain D0784_20155 PF00158 Sigma-54 interaction domain D0784_20155 PF02954 Bacterial regulatory protein, Fis family D0784_20155 PF01590 GAF domain D0784_20160 PF07724 AAA domain (Cdc48 subfamily) D0784_20160 PF17871 AAA lid domain D0784_20160 PF10431 C-terminal, D2-small domain, of ClpB protein D0784_20160 PF00004 ATPase family associated with various cellular activities (AAA) D0784_20165 PF05638 Type VI secretion system effector, Hcp D0784_20170 PF04717 Type VI secretion system, phage-baseplate injector D0784_20195 PF00069 Protein kinase domain D0784_20230 PF01037 Lrp/AsnC ligand binding domain D0784_20300 PF07715 TonB-dependent Receptor Plug Domain D0784_20300 PF00593 TonB dependent receptor D0784_20310 PF00563 EAL domain D0784_20310 PF00990 Diguanylate cyclase, GGDEF domain D0784_20310 PF03707 Bacterial signalling protein N terminal repeat D0784_20315 PF00990 Diguanylate cyclase, GGDEF domain D0784_20320 PF03466 LysR substrate binding domain D0784_20320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_20325 PF00196 Bacterial regulatory proteins, luxR family D0784_20325 PF00072 Response regulator receiver domain D0784_20330 PF00881 Nitroreductase family D0784_20335 PF01584 CheW-like domain D0784_20335 PF00072 Response regulator receiver domain D0784_20340 PF08334 Type II secretion system (T2SS), protein G D0784_20340 PF07963 Prokaryotic N-terminal methylation motif D0784_20350 PF00892 EamA-like transporter family D0784_20370 PF01569 PAP2 superfamily D0784_20385 PF04151 Bacterial pre-peptidase C-terminal domain D0784_20385 PF02868 Thermolysin metallopeptidase, alpha-helical domain D0784_20385 PF01447 Thermolysin metallopeptidase, catalytic domain D0784_20385 PF07504 Fungalysin/Thermolysin Propeptide Motif D0784_20385 PF03413 Peptidase propeptide and YPEB domain D0784_20390 PF00893 Small Multidrug Resistance protein D0784_20395 PF00892 EamA-like transporter family D0784_20415 PF00171 Aldehyde dehydrogenase family D0784_20425 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D0784_20430 PF00753 Metallo-beta-lactamase superfamily D0784_20440 PF01645 Conserved region in glutamate synthase D0784_20440 PF13187 4Fe-4S dicluster domain D0784_20455 PF01757 Acyltransferase family D0784_20465 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D0784_20470 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0784_20505 PF03793 PASTA domain D0784_20505 PF00069 Protein kinase domain D0784_20525 PF13677 Membrane MotB of proton-channel complex MotA/MotB D0784_20525 PF00691 OmpA family D0784_20585 PF10431 C-terminal, D2-small domain, of ClpB protein D0784_20585 PF17871 AAA lid domain D0784_20585 PF07724 AAA domain (Cdc48 subfamily) D0784_20585 PF00004 ATPase family associated with various cellular activities (AAA) D0784_20595 PF04717 Type VI secretion system, phage-baseplate injector D0784_20610 PF03527 RHS protein D0784_20630 PF00149 Calcineurin-like phosphoesterase D0784_20630 PF12320 Type 5 capsule protein repressor C-terminal domain D0784_20635 PF13476 AAA domain D0784_20645 PF00704 Glycosyl hydrolases family 18 D0784_20675 PF08212 Lipocalin-like domain D0784_20685 PF07690 Major Facilitator Superfamily D0784_20695 PF03606 C4-dicarboxylate anaerobic carrier D0784_20700 PF00034 Cytochrome c D0784_20705 PF01212 Beta-eliminating lyase D0784_20715 PF17868 AAA lid domain D0784_20715 PF12592 Protein of unknown function (DUF3763) D0784_20715 PF07728 AAA domain (dynein-related subfamily) D0784_20720 PF05762 VWA domain containing CoxE-like protein D0784_20730 PF14310 Fibronectin type III-like domain D0784_20730 PF00933 Glycosyl hydrolase family 3 N terminal domain D0784_20730 PF01915 Glycosyl hydrolase family 3 C-terminal domain D0784_20735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_20735 PF03466 LysR substrate binding domain D0784_20740 PF09330 D-lactate dehydrogenase, membrane binding D0784_20740 PF01565 FAD binding domain D0784_20750 PF13462 Thioredoxin D0784_20775 PF00128 Alpha amylase, catalytic domain D0784_20775 PF09154 Domain of unknown function (DUF1939) D0784_20825 PF00990 Diguanylate cyclase, GGDEF domain D0784_20825 PF17156 Gammaproteobacterial periplasmic sensor domain D0784_20830 PF01156 Inosine-uridine preferring nucleoside hydrolase D0784_20835 PF04324 BFD-like [2Fe-2S] binding domain D0784_20835 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0784_20835 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D0784_20835 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D0784_20835 PF18267 Rubredoxin NAD+ reductase C-terminal domain D0784_20840 PF13806 Rieske-like [2Fe-2S] domain D0784_20845 PF01226 Formate/nitrite transporter D0784_20850 PF14824 Sirohaem biosynthesis protein central D0784_20850 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D0784_20850 PF10414 Sirohaem synthase dimerisation region D0784_20865 PF03605 Anaerobic c4-dicarboxylate membrane transporter D0784_20875 PF17200 Single Cache domain 2 D0784_20875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0784_20875 PF00672 HAMP domain D0784_20890 PF11756 Nitrous oxide-stimulated promoter D0784_20895 PF01554 MatE D0784_20905 PF07690 Major Facilitator Superfamily D0784_20910 PF00085 Thioredoxin D0784_20915 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D0784_20915 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D0784_20940 PF00529 HlyD membrane-fusion protein of T1SS D0784_20940 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0784_20950 PF01594 AI-2E family transporter D0784_20960 PF01238 Phosphomannose isomerase type I D0784_20965 PF07690 Major Facilitator Superfamily D0784_20970 PF07730 Histidine kinase D0784_20970 PF05231 MASE1 D0784_20970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_20975 PF00072 Response regulator receiver domain D0784_20975 PF00196 Bacterial regulatory proteins, luxR family D0784_20980 PF07690 Major Facilitator Superfamily D0784_21015 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D0784_21015 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0784_21025 PF04143 Sulphur transport D0784_21040 PF13597 Anaerobic ribonucleoside-triphosphate reductase D0784_21040 PF03477 ATP cone domain D0784_21050 PF01554 MatE D0784_21055 PF12833 Helix-turn-helix domain D0784_21060 PF00155 Aminotransferase class I and II D0784_21075 PF04076 Bacterial OB fold (BOF) protein D0784_21080 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D0784_21080 PF07685 CobB/CobQ-like glutamine amidotransferase domain D0784_21090 PF00528 Binding-protein-dependent transport system inner membrane component D0784_21095 PF00005 ABC transporter D0784_21095 PF03459 TOBE domain D0784_21105 PF00360 Phytochrome region D0784_21105 PF01590 GAF domain D0784_21105 PF00563 EAL domain D0784_21105 PF00990 Diguanylate cyclase, GGDEF domain D0784_21110 PF00990 Diguanylate cyclase, GGDEF domain D0784_21110 PF00072 Response regulator receiver domain D0784_21125 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch D0784_21125 PF05222 Alanine dehydrogenase/PNT, N-terminal domain D0784_21125 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D0784_21130 PF02233 NAD(P) transhydrogenase beta subunit D0784_21140 PF00072 Response regulator receiver domain D0784_21140 PF00486 Transcriptional regulatory protein, C terminal D0784_21155 PF03701 Uncharacterised protein family (UPF0181) D0784_21230 PF01253 Translation initiation factor SUI1 D0784_21240 PF07478 D-ala D-ala ligase C-terminus D0784_21240 PF01820 D-ala D-ala ligase N-terminus D0784_21245 PF05036 Sporulation related domain D0784_21250 PF13607 Succinyl-CoA ligase like flavodoxin domain D0784_21250 PF13380 CoA binding domain D0784_21250 PF00583 Acetyltransferase (GNAT) family D0784_21255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_21255 PF03466 LysR substrate binding domain D0784_21260 PF00593 TonB dependent receptor D0784_21260 PF07715 TonB-dependent Receptor Plug Domain D0784_21260 PF04886 PT repeat D0784_21270 PF16363 GDP-mannose 4,6 dehydratase D0784_21275 PF08447 PAS fold D0784_21275 PF05231 MASE1 D0784_21275 PF08448 PAS fold D0784_21275 PF13426 PAS domain D0784_21275 PF00990 Diguanylate cyclase, GGDEF domain D0784_21275 PF00563 EAL domain D0784_21280 PF03746 LamB/YcsF family D0784_21285 PF02682 Carboxyltransferase domain, subdomain C and D D0784_21290 PF02626 Carboxyltransferase domain, subdomain A and B D0784_21305 PF00005 ABC transporter D0784_21310 PF13472 GDSL-like Lipase/Acylhydrolase family D0784_21315 PF07055 Enoyl reductase FAD binding domain D0784_21315 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase D0784_21315 PF12241 Trans-2-enoyl-CoA reductase catalytic region D0784_21320 PF00563 EAL domain D0784_21320 PF03707 Bacterial signalling protein N terminal repeat D0784_21320 PF00990 Diguanylate cyclase, GGDEF domain D0784_21320 PF13188 PAS domain D0784_21330 PF01556 DnaJ C terminal domain D0784_21330 PF00226 DnaJ domain D0784_21330 PF00684 DnaJ central domain D0784_21355 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0784_21355 PF12793 Sugar transport-related sRNA regulator N-term D0784_21365 PF03061 Thioesterase superfamily D0784_21370 PF01435 Peptidase family M48 D0784_21380 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D0784_21385 PF12262 Bacterial virulence factor lipase N-terminal D0784_21400 PF02965 Vitamin B12 dependent methionine synthase, activation domain D0784_21400 PF02310 B12 binding domain D0784_21400 PF02607 B12 binding domain D0784_21400 PF00809 Pterin binding enzyme D0784_21400 PF02574 Homocysteine S-methyltransferase D0784_21410 PF03741 Integral membrane protein TerC family D0784_21415 PF02872 5'-nucleotidase, C-terminal domain D0784_21415 PF00149 Calcineurin-like phosphoesterase D0784_21420 PF11398 Protein of unknown function (DUF2813) D0784_21425 PF06496 Protein of unknown function (DUF1097) D0784_21430 PF03466 LysR substrate binding domain D0784_21430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_21440 PF01226 Formate/nitrite transporter D0784_21445 PF04264 YceI-like domain D0784_21450 PF01292 Prokaryotic cytochrome b561 D0784_21465 PF00563 EAL domain D0784_21465 PF12792 CSS motif domain associated with EAL D0784_21470 PF00270 DEAD/DEAH box helicase D0784_21470 PF00271 Helicase conserved C-terminal domain D0784_21475 PF04336 Acyl carrier protein phosphodiesterase D0784_21485 PF17200 Single Cache domain 2 D0784_21485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0784_21485 PF00672 HAMP domain D0784_21490 PF13419 Haloacid dehalogenase-like hydrolase D0784_21495 PF11849 Domain of unknown function (DUF3369) D0784_21510 PF00294 pfkB family carbohydrate kinase D0784_21515 PF01268 Formate--tetrahydrofolate ligase D0784_21520 PF00483 Nucleotidyl transferase D0784_21525 PF06483 Chitinase C D0784_21525 PF00704 Glycosyl hydrolases family 18 D0784_21535 PF12833 Helix-turn-helix domain D0784_21535 PF06719 AraC-type transcriptional regulator N-terminus D0784_21540 PF00465 Iron-containing alcohol dehydrogenase D0784_21550 PF00005 ABC transporter D0784_21555 PF00528 Binding-protein-dependent transport system inner membrane component D0784_21560 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0784_21565 PF00528 Binding-protein-dependent transport system inner membrane component D0784_21570 PF00990 Diguanylate cyclase, GGDEF domain D0784_21570 PF01590 GAF domain D0784_21570 PF00563 EAL domain D0784_21570 PF00989 PAS fold D0784_21585 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D0784_21585 PF00356 Bacterial regulatory proteins, lacI family D0784_21590 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0784_21590 PF00381 PTS HPr component phosphorylation site D0784_21595 PF00294 pfkB family carbohydrate kinase D0784_21600 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0784_21600 PF02378 Phosphotransferase system, EIIC D0784_21610 PF00873 AcrB/AcrD/AcrF family D0784_21615 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0784_21620 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0784_21630 PF01571 Aminomethyltransferase folate-binding domain D0784_21630 PF08669 Glycine cleavage T-protein C-terminal barrel domain D0784_21640 PF00464 Serine hydroxymethyltransferase D0784_21645 PF01597 Glycine cleavage H-protein D0784_21650 PF02347 Glycine cleavage system P-protein D0784_21710 PF12833 Helix-turn-helix domain D0784_21710 PF02311 AraC-like ligand binding domain D0784_21720 PF01638 HxlR-like helix-turn-helix D0784_21730 PF04055 Radical SAM superfamily D0784_21730 PF13186 Iron-sulfur cluster-binding domain D0784_21735 PF00884 Sulfatase D0784_21740 PF00884 Sulfatase D0784_21760 PF01039 Carboxyl transferase domain D0784_21760 PF17848 Acetyl-coA carboxylase zinc finger domain D0784_21765 PF03466 LysR substrate binding domain D0784_21765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_21775 PF13737 Transposase DDE domain D0784_21795 PF00089 Trypsin D0784_21805 PF00664 ABC transporter transmembrane region D0784_21805 PF00005 ABC transporter D0784_21815 PF02583 Metal-sensitive transcriptional repressor D0784_21835 PF09297 NADH pyrophosphatase zinc ribbon domain D0784_21835 PF00293 NUDIX domain D0784_21850 PF07690 Major Facilitator Superfamily D0784_21935 PF00990 Diguanylate cyclase, GGDEF domain D0784_21935 PF00072 Response regulator receiver domain D0784_21940 PF13737 Transposase DDE domain D0784_21945 PF01594 AI-2E family transporter D0784_21975 PF01476 LysM domain D0784_21975 PF08525 Opacity-associated protein A N-terminal motif D0784_21975 PF01551 Peptidase family M23 D0784_21985 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D0784_21995 PF01979 Amidohydrolase family D0784_22000 PF00211 Adenylate and Guanylate cyclase catalytic domain D0784_22000 PF00072 Response regulator receiver domain D0784_22030 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0784_22030 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D0784_22030 PF04324 BFD-like [2Fe-2S] binding domain D0784_22030 PF13806 Rieske-like [2Fe-2S] domain D0784_22030 PF18267 Rubredoxin NAD+ reductase C-terminal domain D0784_22030 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D0784_22035 PF00005 ABC transporter D0784_22040 PF00528 Binding-protein-dependent transport system inner membrane component D0784_22045 PF00005 ABC transporter D0784_22055 PF03861 ANTAR domain D0784_22055 PF08376 Nitrate and nitrite sensing D0784_22060 PF01738 Dienelactone hydrolase family D0784_22065 PF00591 Glycosyl transferase family, a/b domain D0784_22065 PF02885 Glycosyl transferase family, helical bundle domain D0784_22070 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D0784_22070 PF10414 Sirohaem synthase dimerisation region D0784_22070 PF14824 Sirohaem biosynthesis protein central D0784_22075 PF00384 Molybdopterin oxidoreductase D0784_22075 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D0784_22075 PF01568 Molydopterin dinucleotide binding domain D0784_22085 PF00990 Diguanylate cyclase, GGDEF domain D0784_22085 PF00563 EAL domain D0784_22085 PF08448 PAS fold D0784_22090 PF03222 Tryptophan/tyrosine permease family D0784_22100 PF08448 PAS fold D0784_22100 PF00990 Diguanylate cyclase, GGDEF domain D0784_22110 PF01483 Proprotein convertase P-domain D0784_22110 PF00082 Subtilase family D0784_22120 PF00245 Alkaline phosphatase D0784_22135 PF00072 Response regulator receiver domain D0784_22135 PF00486 Transcriptional regulatory protein, C terminal D0784_22175 PF00012 Hsp70 protein D0784_22190 PF00676 Dehydrogenase E1 component D0784_22195 PF02779 Transketolase, pyrimidine binding domain D0784_22195 PF02780 Transketolase, C-terminal domain D0784_22200 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D0784_22200 PF02817 e3 binding domain D0784_22200 PF00364 Biotin-requiring enzyme D0784_22205 PF01012 Electron transfer flavoprotein domain D0784_22205 PF00766 Electron transfer flavoprotein FAD-binding domain D0784_22210 PF01012 Electron transfer flavoprotein domain D0784_22220 PF00563 EAL domain D0784_22220 PF12792 CSS motif domain associated with EAL D0784_22230 PF13417 Glutathione S-transferase, N-terminal domain D0784_22230 PF00043 Glutathione S-transferase, C-terminal domain D0784_22235 PF03466 LysR substrate binding domain D0784_22235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_22245 PF00528 Binding-protein-dependent transport system inner membrane component D0784_22250 PF00528 Binding-protein-dependent transport system inner membrane component D0784_22255 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0784_22260 PF00005 ABC transporter D0784_22295 PF04389 Peptidase family M28 D0784_22295 PF04151 Bacterial pre-peptidase C-terminal domain D0784_22300 PF04151 Bacterial pre-peptidase C-terminal domain D0784_22300 PF02868 Thermolysin metallopeptidase, alpha-helical domain D0784_22300 PF01447 Thermolysin metallopeptidase, catalytic domain D0784_22300 PF03413 Peptidase propeptide and YPEB domain D0784_22300 PF07504 Fungalysin/Thermolysin Propeptide Motif D0784_22315 PF02028 BCCT, betaine/carnitine/choline family transporter D0784_22325 PF00171 Aldehyde dehydrogenase family D0784_22335 PF03466 LysR substrate binding domain D0784_22335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_22340 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0784_22340 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D0784_22345 PF01040 UbiA prenyltransferase family D0784_22350 PF03626 Prokaryotic Cytochrome C oxidase subunit IV D0784_22355 PF00510 Cytochrome c oxidase subunit III D0784_22360 PF00115 Cytochrome C and Quinol oxidase polypeptide I D0784_22365 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D0784_22365 PF06481 COX Aromatic Rich Motif D0784_22375 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D0784_22375 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D0784_22380 PF00378 Enoyl-CoA hydratase/isomerase D0784_22385 PF00378 Enoyl-CoA hydratase/isomerase D0784_22395 PF00171 Aldehyde dehydrogenase family D0784_22400 PF00108 Thiolase, N-terminal domain D0784_22400 PF02803 Thiolase, C-terminal domain D0784_22405 PF09278 MerR, DNA binding D0784_22405 PF00376 MerR family regulatory protein D0784_22410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D0784_22410 PF02770 Acyl-CoA dehydrogenase, middle domain D0784_22410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D0784_22415 PF01039 Carboxyl transferase domain D0784_22420 PF00378 Enoyl-CoA hydratase/isomerase D0784_22425 PF00682 HMGL-like D0784_22455 PF00034 Cytochrome c D0784_22460 PF00115 Cytochrome C and Quinol oxidase polypeptide I D0784_22470 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D0784_22470 PF00034 Cytochrome c D0784_22480 PF01734 Patatin-like phospholipase D0784_22485 PF13990 YjcZ-like protein D0784_22490 PF00350 Dynamin family D0784_22510 PF13657 HipA N-terminal domain D0784_22510 PF07804 HipA-like C-terminal domain D0784_22515 PF02463 RecF/RecN/SMC N terminal domain D0784_22520 PF01695 IstB-like ATP binding protein D0784_22525 PF00665 Integrase core domain D0784_22540 PF13737 Transposase DDE domain D0784_22580 PF10509 Galactokinase galactose-binding signature D0784_22580 PF00288 GHMP kinases N terminal domain D0784_22580 PF08544 GHMP kinases C terminal D0784_22585 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain D0784_22585 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain D0784_22590 PF16363 GDP-mannose 4,6 dehydratase D0784_22595 PF00672 HAMP domain D0784_22595 PF12729 Four helix bundle sensory module for signal transduction D0784_22595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0784_22600 PF02264 LamB porin D0784_22605 PF08532 Beta-galactosidase trimerisation domain D0784_22605 PF02449 Beta-galactosidase D0784_22605 PF08533 Beta-galactosidase C-terminal domain D0784_22610 PF07745 Glycosyl hydrolase family 53 D0784_22615 PF00528 Binding-protein-dependent transport system inner membrane component D0784_22620 PF00528 Binding-protein-dependent transport system inner membrane component D0784_22625 PF13416 Bacterial extracellular solute-binding protein D0784_22630 PF17912 MalK OB fold domain D0784_22630 PF00005 ABC transporter D0784_22640 PF07745 Glycosyl hydrolase family 53 D0784_22705 PF00871 Acetokinase family D0784_22715 PF00563 EAL domain D0784_22715 PF00990 Diguanylate cyclase, GGDEF domain D0784_22715 PF03707 Bacterial signalling protein N terminal repeat D0784_22720 PF03880 DbpA RNA binding domain D0784_22720 PF00270 DEAD/DEAH box helicase D0784_22720 PF00271 Helicase conserved C-terminal domain D0784_22725 PF00575 S1 RNA binding domain D0784_22725 PF00773 RNB domain D0784_22725 PF08206 Ribonuclease B OB domain D0784_22730 PF12833 Helix-turn-helix domain D0784_22740 PF12849 PBP superfamily domain D0784_22745 PF01575 MaoC like domain D0784_22755 PF00005 ABC transporter D0784_22760 PF00563 EAL domain D0784_22760 PF12792 CSS motif domain associated with EAL D0784_22780 PF00271 Helicase conserved C-terminal domain D0784_22780 PF00270 DEAD/DEAH box helicase D0784_22785 PF00990 Diguanylate cyclase, GGDEF domain D0784_22785 PF00563 EAL domain D0784_22785 PF13426 PAS domain D0784_22785 PF08448 PAS fold D0784_22785 PF08447 PAS fold D0784_22785 PF05231 MASE1 D0784_22790 PF07683 Cobalamin synthesis protein cobW C-terminal domain D0784_22790 PF02492 CobW/HypB/UreG, nucleotide-binding domain D0784_22800 PF01470 Pyroglutamyl peptidase D0784_22825 PF12843 Putative quorum-sensing-regulated virulence factor D0784_22855 PF01329 Pterin 4 alpha carbinolamine dehydratase D0784_22860 PF00351 Biopterin-dependent aromatic amino acid hydroxylase D0784_22870 PF13193 AMP-binding enzyme C-terminal domain D0784_22870 PF00501 AMP-binding enzyme D0784_22880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_22880 PF03466 LysR substrate binding domain D0784_22890 PF00892 EamA-like transporter family D0784_22900 PF00465 Iron-containing alcohol dehydrogenase D0784_22905 PF07995 Glucose / Sorbosone dehydrogenase D0784_22910 PF02016 LD-carboxypeptidase N-terminal domain D0784_22910 PF17676 LD-carboxypeptidase C-terminal domain D0784_22920 PF00210 Ferritin-like domain D0784_22925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0784_22925 PF00672 HAMP domain D0784_22925 PF12729 Four helix bundle sensory module for signal transduction D0784_22935 PF00005 ABC transporter D0784_22935 PF02687 FtsX-like permease family D0784_22935 PF12704 MacB-like periplasmic core domain D0784_22940 PF12704 MacB-like periplasmic core domain D0784_22940 PF00005 ABC transporter D0784_22940 PF02687 FtsX-like permease family D0784_22955 PF00990 Diguanylate cyclase, GGDEF domain D0784_22965 PF03889 Alternative ribosome-rescue factor A D0784_22970 PF00313 'Cold-shock' DNA-binding domain D0784_22990 PF05736 OprF membrane domain D0784_22990 PF00691 OmpA family D0784_23000 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D0784_23000 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D0784_23005 PF13419 Haloacid dehalogenase-like hydrolase D0784_23010 PF00472 RF-1 domain D0784_23015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0784_23015 PF00672 HAMP domain D0784_23015 PF12729 Four helix bundle sensory module for signal transduction D0784_23020 PF00873 AcrB/AcrD/AcrF family D0784_23025 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0784_23035 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D0784_23040 PF07687 Peptidase dimerisation domain D0784_23040 PF01546 Peptidase family M20/M25/M40 D0784_23055 PF00072 Response regulator receiver domain D0784_23055 PF00196 Bacterial regulatory proteins, luxR family D0784_23060 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term D0784_23060 PF00672 HAMP domain D0784_23060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_23060 PF07730 Histidine kinase D0784_23075 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D0784_23075 PF01568 Molydopterin dinucleotide binding domain D0784_23075 PF00384 Molybdopterin oxidoreductase D0784_23080 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) D0784_23085 PF03264 NapC/NirT cytochrome c family, N-terminal region D0784_23095 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus D0784_23095 PF00561 alpha/beta hydrolase fold D0784_23105 PF00108 Thiolase, N-terminal domain D0784_23105 PF02803 Thiolase, C-terminal domain D0784_23110 PF00106 short chain dehydrogenase D0784_23115 PF01810 LysE type translocator D0784_23125 PF02355 Protein export membrane protein D0784_23125 PF07549 SecD/SecF GG Motif D0784_23130 PF13721 SecD export protein N-terminal TM region D0784_23130 PF07549 SecD/SecF GG Motif D0784_23130 PF02355 Protein export membrane protein D0784_23160 PF01037 Lrp/AsnC ligand binding domain D0784_23175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_23175 PF09308 LuxQ, periplasmic D0784_23175 PF00512 His Kinase A (phospho-acceptor) domain D0784_23175 PF00072 Response regulator receiver domain D0784_23180 PF13407 Periplasmic binding protein domain D0784_23185 PF01541 GIY-YIG catalytic domain D0784_23190 PF04337 Protein of unknown function, DUF480 D0784_23200 PF04363 Protein of unknown function (DUF496) D0784_23205 PF01554 MatE D0784_23210 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D0784_23215 PF00672 HAMP domain D0784_23215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_23215 PF00512 His Kinase A (phospho-acceptor) domain D0784_23215 PF01627 Hpt domain D0784_23215 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D0784_23215 PF00072 Response regulator receiver domain D0784_23220 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D0784_23220 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D0784_23240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_23240 PF03466 LysR substrate binding domain D0784_23250 PF01037 Lrp/AsnC ligand binding domain D0784_23255 PF13520 Amino acid permease D0784_23260 PF00392 Bacterial regulatory proteins, gntR family D0784_23260 PF00155 Aminotransferase class I and II D0784_23270 PF00512 His Kinase A (phospho-acceptor) domain D0784_23270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_23270 PF00672 HAMP domain D0784_23270 PF16527 Two-component sensor protein CpxA, periplasmic domain D0784_23275 PF00486 Transcriptional regulatory protein, C terminal D0784_23275 PF00072 Response regulator receiver domain D0784_23300 PF00529 HlyD membrane-fusion protein of T1SS D0784_23300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0784_23305 PF03109 ABC1 family D0784_23310 PF00571 CBS domain D0784_23310 PF01769 Divalent cation transporter D0784_23310 PF03448 MgtE intracellular N domain D0784_23315 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin D0784_23320 PF07969 Amidohydrolase family D0784_23335 PF01966 HD domain D0784_23350 PF07690 Major Facilitator Superfamily D0784_23360 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D0784_23365 PF00255 Glutathione peroxidase D0784_23380 PF01323 DSBA-like thioredoxin domain D0784_23395 PF00106 short chain dehydrogenase D0784_23400 PF00486 Transcriptional regulatory protein, C terminal D0784_23400 PF00072 Response regulator receiver domain D0784_23405 PF00512 His Kinase A (phospho-acceptor) domain D0784_23405 PF00672 HAMP domain D0784_23405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_23415 PF01219 Prokaryotic diacylglycerol kinase D0784_23420 PF00884 Sulfatase D0784_23420 PF08019 Phosphoethanolamine transferase EptA/EptB D0784_23430 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D0784_23435 PF12833 Helix-turn-helix domain D0784_23435 PF01965 DJ-1/PfpI family D0784_23450 PF07690 Major Facilitator Superfamily D0784_23470 PF03466 LysR substrate binding domain D0784_23470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_23475 PF02525 Flavodoxin-like fold D0784_23480 PF00999 Sodium/hydrogen exchanger family D0784_23480 PF02254 TrkA-N domain D0784_23490 PF03466 LysR substrate binding domain D0784_23490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_23520 PF03466 LysR substrate binding domain D0784_23520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_23530 PF00128 Alpha amylase, catalytic domain D0784_23540 PF00072 Response regulator receiver domain D0784_23540 PF01584 CheW-like domain D0784_23555 PF01243 Pyridoxamine 5'-phosphate oxidase D0784_23560 PF06228 Haem utilisation ChuX/HutX D0784_23565 PF04055 Radical SAM superfamily D0784_23570 PF03544 Gram-negative bacterial TonB protein C-terminal D0784_23575 PF01618 MotA/TolQ/ExbB proton channel family D0784_23580 PF02472 Biopolymer transport protein ExbD/TolR D0784_23590 PF01032 FecCD transport family D0784_23595 PF00005 ABC transporter D0784_23635 PF01467 Cytidylyltransferase-like D0784_23640 PF02540 NAD synthase D0784_23645 PF00111 2Fe-2S iron-sulfur cluster binding domain D0784_23645 PF03476 MOSC N-terminal beta barrel domain D0784_23645 PF03473 MOSC domain D0784_23645 PF00111 2Fe-2S iron-sulfur cluster binding domain D0784_23645 PF03476 MOSC N-terminal beta barrel domain D0784_23645 PF03473 MOSC domain D0784_23650 PF01679 Proteolipid membrane potential modulator D0784_23660 PF01979 Amidohydrolase family D0784_23665 PF05661 Protein of unknown function (DUF808) D0784_23695 PF00528 Binding-protein-dependent transport system inner membrane component D0784_23700 PF00528 Binding-protein-dependent transport system inner membrane component D0784_23700 PF14785 Maltose transport system permease protein MalF P2 domain D0784_23705 PF01547 Bacterial extracellular solute-binding protein D0784_23715 PF00005 ABC transporter D0784_23715 PF08402 TOBE domain D0784_23725 PF00563 EAL domain D0784_23725 PF12792 CSS motif domain associated with EAL D0784_23730 PF02397 Bacterial sugar transferase D0784_23745 PF13614 AAA domain D0784_23745 PF13807 G-rich domain on putative tyrosine kinase D0784_23745 PF02706 Chain length determinant protein D0784_23755 PF00534 Glycosyl transferases group 1 D0784_23755 PF13439 Glycosyltransferase Family 4 D0784_23790 PF16925 Tetracyclin repressor-like, C-terminal domain D0784_23790 PF00440 Bacterial regulatory proteins, tetR family D0784_23795 PF00107 Zinc-binding dehydrogenase D0784_23795 PF16884 N-terminal domain of oxidoreductase D0784_23805 PF00199 Catalase D0784_23805 PF06628 Catalase-related immune-responsive D0784_23810 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D0784_23810 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D0784_23825 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0784_23835 PF12833 Helix-turn-helix domain D0784_23840 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0784_23840 PF02378 Phosphotransferase system, EIIC D0784_23840 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0784_23845 PF01238 Phosphomannose isomerase type I D0784_23855 PF00892 EamA-like transporter family D0784_23870 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0784_23870 PF18113 Rubredoxin binding C-terminal domain D0784_23875 PF00301 Rubredoxin D0784_23875 PF00258 Flavodoxin D0784_23875 PF00753 Metallo-beta-lactamase superfamily D0784_23880 PF00158 Sigma-54 interaction domain D0784_23880 PF01590 GAF domain D0784_23885 PF13419 Haloacid dehalogenase-like hydrolase D0784_23890 PF00375 Sodium:dicarboxylate symporter family D0784_23895 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0784_23905 PF00127 Copper binding proteins, plastocyanin/azurin family D0784_23910 PF02378 Phosphotransferase system, EIIC D0784_23915 PF00563 EAL domain D0784_23915 PF03707 Bacterial signalling protein N terminal repeat D0784_23915 PF00990 Diguanylate cyclase, GGDEF domain D0784_23925 PF00691 OmpA family D0784_23925 PF01389 OmpA-like transmembrane domain D0784_23945 PF00691 OmpA family D0784_23945 PF01389 OmpA-like transmembrane domain D0784_23965 PF00512 His Kinase A (phospho-acceptor) domain D0784_23965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_23970 PF02954 Bacterial regulatory protein, Fis family D0784_23970 PF00072 Response regulator receiver domain D0784_23970 PF00158 Sigma-54 interaction domain D0784_23975 PF14602 Hexapeptide repeat of succinyl-transferase D0784_23975 PF12464 Maltose acetyltransferase D0784_23980 PF00529 HlyD membrane-fusion protein of T1SS D0784_23985 PF00005 ABC transporter D0784_23985 PF00664 ABC transporter transmembrane region D0784_23995 PF00196 Bacterial regulatory proteins, luxR family D0784_24000 PF00196 Bacterial regulatory proteins, luxR family D0784_24010 PF00672 HAMP domain D0784_24010 PF02743 Cache domain D0784_24010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0784_24030 PF07726 ATPase family associated with various cellular activities (AAA) D0784_24030 PF17863 AAA lid domain D0784_24035 PF01882 Protein of unknown function DUF58 D0784_24045 PF13519 von Willebrand factor type A domain D0784_24050 PF13519 von Willebrand factor type A domain D0784_24065 PF00005 ABC transporter D0784_24070 PF00528 Binding-protein-dependent transport system inner membrane component D0784_24075 PF00528 Binding-protein-dependent transport system inner membrane component D0784_24080 PF12849 PBP superfamily domain D0784_24085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0784_24085 PF02743 Cache domain D0784_24085 PF00672 HAMP domain D0784_24105 PF00593 TonB dependent receptor D0784_24105 PF07715 TonB-dependent Receptor Plug Domain D0784_24110 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain D0784_24110 PF00326 Prolyl oligopeptidase family D0784_24115 PF00271 Helicase conserved C-terminal domain D0784_24115 PF00270 DEAD/DEAH box helicase D0784_24125 PF17969 L,D-transpeptidase C-terminal domain D0784_24125 PF01476 LysM domain D0784_24125 PF03734 L,D-transpeptidase catalytic domain D0784_24130 PF03441 FAD binding domain of DNA photolyase D0784_24130 PF00875 DNA photolyase D0784_24135 PF13411 MerR HTH family regulatory protein D0784_24140 PF08349 Protein of unknown function (DUF1722) D0784_24150 PF01048 Phosphorylase superfamily D0784_24165 PF00990 Diguanylate cyclase, GGDEF domain D0784_24175 PF11742 Protein of unknown function (DUF3302) D0784_24180 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0784_24180 PF00529 HlyD membrane-fusion protein of T1SS D0784_24185 PF07155 ECF-type riboflavin transporter, S component D0784_24190 PF12558 ATP-binding cassette cobalt transporter D0784_24190 PF00005 ABC transporter D0784_24210 PF01022 Bacterial regulatory protein, arsR family D0784_24220 PF12801 4Fe-4S binding domain D0784_24220 PF12837 4Fe-4S binding domain D0784_24225 PF12838 4Fe-4S dicluster domain D0784_24225 PF12800 4Fe-4S binding domain D0784_24230 PF13302 Acetyltransferase (GNAT) domain D0784_24245 PF12945 Flagellar protein YcgR D0784_24245 PF07238 PilZ domain D0784_24250 PF13609 Gram-negative porin D0784_24255 PF12729 Four helix bundle sensory module for signal transduction D0784_24255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0784_24255 PF00672 HAMP domain D0784_24260 PF13654 AAA domain D0784_24260 PF05362 Lon protease (S16) C-terminal proteolytic domain D0784_24270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0784_24270 PF00005 ABC transporter D0784_24275 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain D0784_24275 PF00326 Prolyl oligopeptidase family D0784_24280 PF03466 LysR substrate binding domain D0784_24280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_24285 PF02652 L-lactate permease D0784_24290 PF01070 FMN-dependent dehydrogenase D0784_24300 PF00924 Mechanosensitive ion channel D0784_24305 PF00194 Eukaryotic-type carbonic anhydrase D0784_24310 PF08240 Alcohol dehydrogenase GroES-like domain D0784_24310 PF00107 Zinc-binding dehydrogenase D0784_24315 PF07690 Major Facilitator Superfamily D0784_24320 PF00990 Diguanylate cyclase, GGDEF domain D0784_24320 PF17156 Gammaproteobacterial periplasmic sensor domain D0784_24335 PF00176 SNF2 family N-terminal domain D0784_24335 PF00271 Helicase conserved C-terminal domain D0784_24350 PF00476 DNA polymerase family A D0784_24350 PF01367 5'-3' exonuclease, C-terminal SAM fold D0784_24350 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D0784_24360 PF12161 HsdM N-terminal domain D0784_24360 PF02384 N-6 DNA Methylase D0784_24390 PF00107 Zinc-binding dehydrogenase D0784_24390 PF08240 Alcohol dehydrogenase GroES-like domain D0784_24395 PF00155 Aminotransferase class I and II D0784_24410 PF00266 Aminotransferase class-V D0784_24415 PF00072 Response regulator receiver domain D0784_24415 PF08448 PAS fold D0784_24415 PF13426 PAS domain D0784_24415 PF00512 His Kinase A (phospho-acceptor) domain D0784_24415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_24420 PF00486 Transcriptional regulatory protein, C terminal D0784_24420 PF00072 Response regulator receiver domain D0784_24440 PF03466 LysR substrate binding domain D0784_24440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_24445 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0784_24465 PF03466 LysR substrate binding domain D0784_24465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_24500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_24500 PF03466 LysR substrate binding domain D0784_24510 PF05231 MASE1 D0784_24510 PF00563 EAL domain D0784_24520 PF18269 T3SS EscN ATPase C-terminal domain D0784_24520 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D0784_24530 PF14841 FliG middle domain D0784_24530 PF01706 FliG C-terminal domain D0784_24530 PF14842 FliG N-terminal domain D0784_24535 PF01514 Secretory protein of YscJ/FliF family D0784_24535 PF08345 Flagellar M-ring protein C-terminal D0784_24540 PF02049 Flagellar hook-basal body complex protein FliE D0784_24545 PF00158 Sigma-54 interaction domain D0784_24545 PF02954 Bacterial regulatory protein, Fis family D0784_24545 PF00072 Response regulator receiver domain D0784_24560 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D0784_24565 PF00813 FliP family D0784_24570 PF01313 Bacterial export proteins, family 3 D0784_24575 PF01311 Bacterial export proteins, family 1 D0784_24580 PF01312 FlhB HrpN YscU SpaS Family D0784_24585 PF00771 FHIPEP family D0784_24595 PF00669 Bacterial flagellin N-terminal helical region D0784_24595 PF00700 Bacterial flagellin C-terminal helical region D0784_24605 PF02465 Flagellar hook-associated protein 2 N-terminus D0784_24605 PF07195 Flagellar hook-associated protein 2 C-terminus D0784_24605 PF07196 Flagellin hook IN motif D0784_24610 PF02561 Flagellar protein FliS D0784_24625 PF03748 Flagellar basal body-associated protein FliL D0784_24630 PF04545 Sigma-70, region 4 D0784_24630 PF04542 Sigma-70 region 2 D0784_24635 PF01618 MotA/TolQ/ExbB proton channel family D0784_24640 PF00691 OmpA family D0784_24640 PF13677 Membrane MotB of proton-channel complex MotA/MotB D0784_24665 PF02567 Phenazine biosynthesis-like protein D0784_24670 PF08000 Bacterial PH domain D0784_24680 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0784_24715 PF01070 FMN-dependent dehydrogenase D0784_24735 PF00700 Bacterial flagellin C-terminal helical region D0784_24735 PF00669 Bacterial flagellin N-terminal helical region D0784_24740 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0784_24740 PF00460 Flagella basal body rod protein D0784_24745 PF10135 Rod binding protein D0784_24745 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase D0784_24750 PF02119 Flagellar P-ring protein D0784_24755 PF02107 Flagellar L-ring protein D0784_24760 PF00460 Flagella basal body rod protein D0784_24760 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0784_24765 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0784_24765 PF00460 Flagella basal body rod protein D0784_24770 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0784_24770 PF00460 Flagella basal body rod protein D0784_24770 PF07559 Flagellar basal body protein FlaE D0784_24775 PF13860 FlgD Ig-like domain D0784_24775 PF03963 Flagellar hook capping protein - N-terminal region D0784_24775 PF13861 FlgD Tudor-like domain D0784_24780 PF00460 Flagella basal body rod protein D0784_24780 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0784_24785 PF00460 Flagella basal body rod protein D0784_24805 PF01464 Transglycosylase SLT domain D0784_24805 PF01476 LysM domain D0784_24830 PF03315 Serine dehydratase beta chain D0784_24830 PF03313 Serine dehydratase alpha chain D0784_24835 PF00854 POT family D0784_24840 PF01566 Natural resistance-associated macrophage protein D0784_24850 PF03466 LysR substrate binding domain D0784_24850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_24860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_24860 PF03466 LysR substrate binding domain D0784_24865 PF00691 OmpA family D0784_24865 PF01389 OmpA-like transmembrane domain D0784_24870 PF00246 Zinc carboxypeptidase D0784_24870 PF18027 Cytosolic carboxypeptidase N-terminal domain D0784_24875 PF01266 FAD dependent oxidoreductase D0784_24885 PF04393 Protein of unknown function (DUF535) D0784_24900 PF07702 UTRA domain D0784_24900 PF00392 Bacterial regulatory proteins, gntR family D0784_24905 PF00528 Binding-protein-dependent transport system inner membrane component D0784_24910 PF00005 ABC transporter D0784_24920 PF00266 Aminotransferase class-V D0784_24930 PF13419 Haloacid dehalogenase-like hydrolase D0784_24945 PF00657 GDSL-like Lipase/Acylhydrolase D0784_24970 PF13419 Haloacid dehalogenase-like hydrolase D0784_24975 PF03466 LysR substrate binding domain D0784_24975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_25000 PF14602 Hexapeptide repeat of succinyl-transferase D0784_25000 PF12464 Maltose acetyltransferase D0784_25005 PF02566 OsmC-like protein D0784_25010 PF01641 SelR domain D0784_25010 PF01625 Peptide methionine sulfoxide reductase D0784_25025 PF04244 Deoxyribodipyrimidine photo-lyase-related protein D0784_25030 PF03441 FAD binding domain of DNA photolyase D0784_25030 PF00875 DNA photolyase D0784_25035 PF00990 Diguanylate cyclase, GGDEF domain D0784_25050 PF03707 Bacterial signalling protein N terminal repeat D0784_25050 PF00990 Diguanylate cyclase, GGDEF domain D0784_25050 PF00563 EAL domain D0784_25070 PF00483 Nucleotidyl transferase D0784_25075 PF01773 Na+ dependent nucleoside transporter N-terminus D0784_25075 PF07662 Na+ dependent nucleoside transporter C-terminus D0784_25075 PF07670 Nucleoside recognition D0784_25095 PF01212 Beta-eliminating lyase D0784_25100 PF03116 NQR2, RnfD, RnfE family D0784_25110 PF01266 FAD dependent oxidoreductase D0784_25130 PF05525 Branched-chain amino acid transport protein D0784_25135 PF00158 Sigma-54 interaction domain D0784_25135 PF02954 Bacterial regulatory protein, Fis family D0784_25135 PF00072 Response regulator receiver domain D0784_25140 PF00072 Response regulator receiver domain D0784_25140 PF13426 PAS domain D0784_25140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_25140 PF00512 His Kinase A (phospho-acceptor) domain D0784_25140 PF08448 PAS fold D0784_25150 PF00232 Glycosyl hydrolase family 1 D0784_25175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_25175 PF03466 LysR substrate binding domain D0784_25185 PF08443 RimK-like ATP-grasp domain D0784_25185 PF18030 RimK PreATP-grasp domain D0784_25190 PF18030 RimK PreATP-grasp domain D0784_25190 PF08443 RimK-like ATP-grasp domain D0784_25200 PF17944 Arginine decarboxylase C-terminal helical extension D0784_25200 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D0784_25200 PF17810 Arginine decarboxylase helical bundle domain D0784_25205 PF00491 Arginase family D0784_25210 PF07690 Major Facilitator Superfamily D0784_25215 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain D0784_25215 PF00326 Prolyl oligopeptidase family D0784_25230 PF00950 ABC 3 transport family D0784_25235 PF00005 ABC transporter D0784_25240 PF01297 Zinc-uptake complex component A periplasmic D0784_25285 PF02472 Biopolymer transport protein ExbD/TolR D0784_25290 PF01618 MotA/TolQ/ExbB proton channel family D0784_25295 PF01618 MotA/TolQ/ExbB proton channel family D0784_25305 PF00593 TonB dependent receptor D0784_25305 PF07715 TonB-dependent Receptor Plug Domain D0784_25310 PF00672 HAMP domain D0784_25310 PF00512 His Kinase A (phospho-acceptor) domain D0784_25310 PF16750 Sensor domain of 2-component histidine kinase D0784_25310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_25315 PF00072 Response regulator receiver domain D0784_25315 PF00486 Transcriptional regulatory protein, C terminal D0784_25320 PF03009 Glycerophosphoryl diester phosphodiesterase family D0784_25330 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D0784_25330 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D0784_25335 PF10928 Protein of unknown function (DUF2810) D0784_25390 PF04013 Putative SAM-dependent RNA methyltransferase D0784_25395 PF01523 Putative modulator of DNA gyrase D0784_25400 PF01523 Putative modulator of DNA gyrase D0784_25405 PF08543 Phosphomethylpyrimidine kinase D0784_25410 PF00005 ABC transporter D0784_25415 PF00528 Binding-protein-dependent transport system inner membrane component D0784_25420 PF09084 NMT1/THI5 like D0784_25425 PF03070 TENA/THI-4/PQQC family D0784_25430 PF02110 Hydroxyethylthiazole kinase family D0784_25435 PF02581 Thiamine monophosphate synthase D0784_25440 PF01569 PAP2 superfamily D0784_25445 PF00384 Molybdopterin oxidoreductase D0784_25445 PF18364 Molybdopterin oxidoreductase N-terminal domain D0784_25445 PF01568 Molydopterin dinucleotide binding domain D0784_25450 PF03264 NapC/NirT cytochrome c family, N-terminal region D0784_25480 PF00583 Acetyltransferase (GNAT) family D0784_25520 PF00155 Aminotransferase class I and II D0784_25520 PF00392 Bacterial regulatory proteins, gntR family D0784_25525 PF02595 Glycerate kinase family D0784_25530 PF05651 Putative sugar diacid recognition D0784_25530 PF13556 PucR C-terminal helix-turn-helix domain D0784_25530 PF17853 GGDEF-like domain D0784_25565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_25565 PF03466 LysR substrate binding domain D0784_25590 PF01593 Flavin containing amine oxidoreductase D0784_25590 PF02027 RolB/RolC glucosidase family D0784_25605 PF03974 Ecotin D0784_25610 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0784_25625 PF01204 Trehalase D0784_25635 PF12706 Beta-lactamase superfamily domain D0784_25645 PF07690 Major Facilitator Superfamily D0784_25650 PF13533 Biotin-lipoyl like D0784_25655 PF03922 OmpW family D0784_25660 PF13599 Pentapeptide repeats (9 copies) D0784_25675 PF01554 MatE D0784_25680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_25680 PF03466 LysR substrate binding domain D0784_25690 PF00893 Small Multidrug Resistance protein D0784_25700 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading D0784_25700 PF18416 N-acetylglucosamine binding protein domain 2 D0784_25705 PF01037 Lrp/AsnC ligand binding domain D0784_25710 PF01810 LysE type translocator D0784_25715 PF00326 Prolyl oligopeptidase family D0784_25745 PF03466 LysR substrate binding domain D0784_25745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_25760 PF00797 N-acetyltransferase D0784_25765 PF00107 Zinc-binding dehydrogenase D0784_25765 PF08240 Alcohol dehydrogenase GroES-like domain D0784_25770 PF00756 Putative esterase D0784_25780 PF05656 Protein of unknown function (DUF805) D0784_25790 PF03707 Bacterial signalling protein N terminal repeat D0784_25790 PF00990 Diguanylate cyclase, GGDEF domain D0784_25790 PF00563 EAL domain D0784_25810 PF01809 Putative membrane protein insertion efficiency factor D0784_25815 PF00849 RNA pseudouridylate synthase D0784_25820 PF01554 MatE D0784_25825 PF00933 Glycosyl hydrolase family 3 N terminal domain D0784_25825 PF14310 Fibronectin type III-like domain D0784_25825 PF01915 Glycosyl hydrolase family 3 C-terminal domain D0784_25830 PF12833 Helix-turn-helix domain D0784_25845 PF00356 Bacterial regulatory proteins, lacI family D0784_25855 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0784_25855 PF00005 ABC transporter D0784_25860 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0784_25860 PF00005 ABC transporter D0784_25865 PF00528 Binding-protein-dependent transport system inner membrane component D0784_25865 PF12911 N-terminal TM domain of oligopeptide transport permease C D0784_25870 PF00528 Binding-protein-dependent transport system inner membrane component D0784_25875 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0784_25885 PF00356 Bacterial regulatory proteins, lacI family D0784_25890 PF17912 MalK OB fold domain D0784_25890 PF00005 ABC transporter D0784_25895 PF00232 Glycosyl hydrolase family 1 D0784_25900 PF00528 Binding-protein-dependent transport system inner membrane component D0784_25905 PF00528 Binding-protein-dependent transport system inner membrane component D0784_25915 PF00356 Bacterial regulatory proteins, lacI family D0784_25930 PF00563 EAL domain D0784_25930 PF00990 Diguanylate cyclase, GGDEF domain D0784_25940 PF06865 Pyrimidine/purine nucleoside phosphorylase D0784_25950 PF08329 Chitinase A, N-terminal domain D0784_25950 PF00704 Glycosyl hydrolases family 18 D0784_25970 PF03600 Citrate transporter D0784_25980 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 D0784_25990 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D0784_25990 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D0784_25995 PF00730 HhH-GPD superfamily base excision DNA repair protein D0784_25995 PF06029 AlkA N-terminal domain D0784_26005 PF07681 DoxX D0784_26010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_26010 PF03466 LysR substrate binding domain D0784_26025 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D0784_26040 PF00194 Eukaryotic-type carbonic anhydrase D0784_26050 PF02492 CobW/HypB/UreG, nucleotide-binding domain D0784_26055 PF12833 Helix-turn-helix domain D0784_26060 PF14760 Rnk N-terminus D0784_26060 PF01272 Transcription elongation factor, GreA/GreB, C-term D0784_26065 PF01042 Endoribonuclease L-PSP D0784_26080 PF01740 STAS domain D0784_26080 PF00916 Sulfate permease family D0784_26090 PF01032 FecCD transport family D0784_26100 PF00005 ABC transporter D0784_26105 PF12833 Helix-turn-helix domain D0784_26115 PF02492 CobW/HypB/UreG, nucleotide-binding domain D0784_26160 PF02386 Cation transport protein D0784_26165 PF12833 Helix-turn-helix domain D0784_26185 PF03616 Sodium/glutamate symporter D0784_26190 PF00155 Aminotransferase class I and II D0784_26190 PF00392 Bacterial regulatory proteins, gntR family D0784_26195 PF00005 ABC transporter D0784_26215 PF01593 Flavin containing amine oxidoreductase D0784_26235 PF03616 Sodium/glutamate symporter D0784_26250 PF00672 HAMP domain D0784_26250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0784_26250 PF17200 Single Cache domain 2 D0784_26255 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D0784_26265 PF00072 Response regulator receiver domain D0784_26265 PF04397 LytTr DNA-binding domain D0784_26270 PF13492 GAF domain D0784_26270 PF06580 Histidine kinase D0784_26270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_26270 PF07694 5TMR of 5TMR-LYT D0784_26290 PF00005 ABC transporter D0784_26300 PF03466 LysR substrate binding domain D0784_26300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0784_26305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0784_26320 PF01098 Cell cycle protein D0784_26325 PF01709 Transcriptional regulator D0784_26335 PF17149 Periplasmic sensor domain found in signal transduction proteins D0784_26335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0784_26335 PF00512 His Kinase A (phospho-acceptor) domain D0784_26335 PF01627 Hpt domain D0784_26335 PF00072 Response regulator receiver domain D0784_26335 PF00672 HAMP domain D0784_26345 PF08719 Domain of unknown function (DUF1768) D0784_26345 PF00925 GTP cyclohydrolase II D0784_26355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0784_26355 PF00005 ABC transporter D0784_26360 PF00005 ABC transporter D0784_26360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0784_26385 PF13614 AAA domain D0784_26385 PF18607 ParA helix turn helix domain D0784_26390 PF08775 ParB family D0784_26390 PF02195 ParB-like nuclease domain D0784_26395 PF05127 Helicase D0784_26395 PF13718 GNAT acetyltransferase 2 D0784_26425 PF13737 Transposase DDE domain D0784_26455 PF13737 Transposase DDE domain D0784_26460 PF07669 Eco57I restriction-modification methylase D0784_26460 PF02384 N-6 DNA Methylase D0784_26485 PF01848 Hok/gef family D0784_26515 PF13362 Toprim domain D0784_26515 PF08401 Domain of unknown function (DUF1738) D0784_26515 PF18818 Metallopeptidase superfamily domain D0784_26550 PF01751 Toprim domain D0784_26550 PF01131 DNA topoisomerase D0784_26615 PF01464 Transglycosylase SLT domain D0784_26620 PF10502 Signal peptidase, peptidase S26 D0784_26640 PF01848 Hok/gef family D0784_26680 PF00437 Type II/IV secretion system protein D0784_26705 PF03743 Bacterial conjugation TrbI-like protein D0784_26715 PF03524 Conjugal transfer protein D0784_26730 PF00437 Type II/IV secretion system protein D0784_26740 PF03135 CagE, TrbE, VirB family, component of type IV transporter system D0784_26745 PF05101 Type IV secretory pathway, VirB3-like protein D0784_26750 PF04956 TrbC/VIRB2 family D0784_26770 PF04754 Putative transposase, YhgA-like D0784_26775 PF13614 AAA domain